BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5880
(328 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|260819156|ref|XP_002604903.1| hypothetical protein BRAFLDRAFT_264353 [Branchiostoma floridae]
gi|229290232|gb|EEN60913.1| hypothetical protein BRAFLDRAFT_264353 [Branchiostoma floridae]
Length = 355
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 164/219 (74%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D V D V+G+ KFG +A Y V+NVSSPNT LR LQ + +L+ L+ V+E
Sbjct: 133 INLGKNKTSPDAVGDYVEGVQKFGALADYLVINVSSPNTPGLRTLQGRQELEQLIDKVLE 192
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R L+ + PP+LVKIAPDL+ +K+DIA V KC VDGLIV+NTT+ R E L +
Sbjct: 193 ARRSLSCERKPPLLVKIAPDLTQQDKEDIAAVATRQKCAVDGLIVTNTTISRPETLQSTN 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG P+R+ STE + +MYKLTKG+LPIIGVGGV G DA+EKI+AGASLVQ+YT
Sbjct: 253 KTETGGLSGPPVRHMSTETVRDMYKLTKGQLPIIGVGGVSCGADAYEKIRAGASLVQLYT 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ Y GPP+V RIK ELE+LL+++G+ SVS+AVGA H++
Sbjct: 313 AMAYQGPPVVNRIKRELEKLLREDGFTSVSEAVGADHRA 351
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KFG +A Y V+NVSSPNT LR LQ + +L+ L+ V+E R L+ + PP+LV
Sbjct: 148 YVEGVQKFGALADYLVINVSSPNTPGLRTLQGRQELEQLIDKVLEARRSLSCERKPPLLV 207
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ +K+DIA V
Sbjct: 208 KIAPDLTQQDKEDIAAVA 225
>gi|328722611|ref|XP_001951009.2| PREDICTED: dihydroorotate dehydrogenase, mitochondrial-like
[Acyrthosiphon pisum]
Length = 386
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 163/218 (74%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D D VKGI KF VA YFV+N+SSPNT LR LQ K L LL +V+E
Sbjct: 168 VNLGKNKESEDAAADYVKGIEKFAPVADYFVINISSPNTPGLRNLQKKKDLMSLLSSVIE 227
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
RNQ+ + P+L+KIAPDL+ +KKDIADV+ D KCKVDGLI+SNTTV R D
Sbjct: 228 ARNQVCGERKIPLLLKIAPDLTDQDKKDIADVINDKKCKVDGLIISNTTVKRIGVYDNPN 287
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG+PL+ +ST+LI E YKLTKGK+PIIGVGGVF+G+DA+ KIKAGASL+QIYT
Sbjct: 288 ALEPGGLSGKPLQEESTKLILEFYKLTKGKIPIIGVGGVFNGQDAYAKIKAGASLIQIYT 347
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
SF+Y+GP ++ IK ELE LL+++ YNS+S A+GA K
Sbjct: 348 SFIYNGPSVIVNIKKELESLLREDKYNSISDAIGADAK 385
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI KF VA YFV+N+SSPNT LR LQ K L LL +V+E RNQ+ + P+L+
Sbjct: 183 YVKGIEKFAPVADYFVINISSPNTPGLRNLQKKKDLMSLLSSVIEARNQVCGERKIPLLL 242
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDL+ +KKDIADV+ D
Sbjct: 243 KIAPDLTDQDKKDIADVIND 262
>gi|321466149|gb|EFX77146.1| hypothetical protein DAPPUDRAFT_106454 [Daphnia pulex]
Length = 352
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 161/204 (78%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPP 181
V D V G+ KFG +A Y V+NVSSPNTA LR+LQ K++L++L+ V+E RN L V LPP
Sbjct: 145 VGDYVDGVKKFGAIADYLVINVSSPNTAGLRRLQQKNELENLISCVLEARNNLGVTKLPP 204
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+L+KIAPDL+ +E+KDIA+V+L C+VDG+IV NTT R L + +K++TGGLSG+PL
Sbjct: 205 LLLKIAPDLNEEERKDIANVILKEHCRVDGIIVCNTTTSRPSDLKSEFKDQTGGLSGQPL 264
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
++ ST I + Y+LT G++PIIGVGGV +G+DAFEKI AGASLVQ+YTSF + GPP+V R
Sbjct: 265 KDISTRCIGDFYRLTGGQIPIIGVGGVATGQDAFEKILAGASLVQLYTSFAFQGPPIVRR 324
Query: 302 IKSELEELLQKEGYNSVSQAVGAA 325
IK EL+E+L+ +GY ++S+A+G +
Sbjct: 325 IKRELDEILRSKGYKNISEAIGKS 348
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 24/170 (14%)
Query: 3 GLDESTCSRILSRVFRSGE------WGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVA 56
G + + SRV GE G N LS+ + +V G+ KFG +A
Sbjct: 105 GFNSEGHEAVYSRVKMEGEKQERAVIGVNLGKNKLSAMEDVGDYVD-----GVKKFGAIA 159
Query: 57 HYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKK 116
Y V+NVSSPNTA LR+LQ K++L++L+ V+E RN L + LPP+L+KIAPDL+ +E+K
Sbjct: 160 DYLVINVSSPNTAGLRRLQQKNELENLISCVLEARNNLGVTKLPPLLLKIAPDLNEEERK 219
Query: 117 DIADVVLDS---VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
DIA+V+L V GI+ V N ++ ++L K + KDQ L
Sbjct: 220 DIANVILKEHCRVDGII---------VCNTTTSRPSDL-KSEFKDQTGGL 259
>gi|357625224|gb|EHJ75733.1| hypothetical protein KGM_02713 [Danaus plexippus]
Length = 391
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 162/218 (74%), Gaps = 1/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D V D GI KF DVA YFV+NVSSPNT LR LQ K++L LL + +
Sbjct: 175 INLGKNKNSDDAVQDYSLGIQKFHDVADYFVINVSSPNTPGLRSLQNKEELAKLLSGINK 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T N L+ K PP+L+K+APDLSL+E KD+ V+ +VDGLI+SNTT+DR ++ +
Sbjct: 235 TLNDLSGK-RPPLLLKLAPDLSLEEMKDVVSVISKKDTRVDGLIISNTTIDRSSLINQEH 293
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG+PL NKSTE+I MYKLTKG +PIIGVGGVF+G+DA+EKI AGAS+VQIYT
Sbjct: 294 SNEAGGLSGKPLTNKSTEMIKTMYKLTKGNIPIIGVGGVFTGQDAYEKILAGASVVQIYT 353
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ +YHGP +VT+IKSEL ELL ++GY +VS AVG K
Sbjct: 354 ALIYHGPQVVTKIKSELAELLIRDGYTNVSMAVGKGVK 391
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
+Q + LGI KF DVA YFV+NVSSPNT LR LQ K++L LL + +T N L+ K PP
Sbjct: 187 VQDYSLGIQKFHDVADYFVINVSSPNTPGLRSLQNKEELAKLLSGINKTLNDLSGK-RPP 245
Query: 102 ILVKIAPDLSLDEKKDIADVV 122
+L+K+APDLSL+E KD+ V+
Sbjct: 246 LLLKLAPDLSLEEMKDVVSVI 266
>gi|270000897|gb|EEZ97344.1| hypothetical protein TcasGA2_TC011160 [Tribolium castaneum]
Length = 350
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 163/218 (74%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D + D V GI K G VA Y V+NVSSPNT LR +Q K+ LK+LLK+ E
Sbjct: 133 VNLGKNKTSDDAINDYVIGIKKLGPVADYLVINVSSPNTPGLRTMQDKNVLKNLLKSAKE 192
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L PP+L+K+APDLS E KDIA+VV K+DGLI+ NTTV+R ++L
Sbjct: 193 ARDSLPEGARPPLLLKLAPDLSYSELKDIANVVRQKDTKIDGLIICNTTVERPQFLHNDR 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG+PLR ST+LI+EMYKLT+G++PIIGVGGVF+G+DA+EKIKAGAS+VQ+YT
Sbjct: 253 KGETGGLSGKPLREASTKLIAEMYKLTRGEIPIIGVGGVFTGRDAYEKIKAGASVVQLYT 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
S VY GPP+V +IK EL ELL +G+ +VS+AVG + K
Sbjct: 313 SLVYEGPPVVAKIKRELVELLADDGFKNVSEAVGCSVK 350
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++GI K G VA Y V+NVSSPNT LR +Q K+ LK+LLK+ E R+ L PP+L+
Sbjct: 148 YVIGIKKLGPVADYLVINVSSPNTPGLRTMQDKNVLKNLLKSAKEARDSLPEGARPPLLL 207
Query: 105 KIAPDLSLDEKKDIADVV 122
K+APDLS E KDIA+VV
Sbjct: 208 KLAPDLSYSELKDIANVV 225
>gi|390346997|ref|XP_794275.3| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 393
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 163/218 (74%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K V D V G+ K G Y V+NVSSPNT LR +Q + QL L++ VV
Sbjct: 176 VNLGKNKTSPSAVQDYVDGVKKLGCFGDYLVINVSSPNTPGLRAMQGRQQLAELIEQVVA 235
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR+ L P PP+LVKIAPDL+ +K+DIA VV+ K V+G+IV+NTT+ R E L+ ++
Sbjct: 236 TRDLLPCTPKPPVLVKIAPDLTQADKEDIAAVVMGKKGSVEGIIVTNTTITRPESLEGKH 295
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG PL++ ST +S+MY+LT GK+ I+GVGGV SG+DA+EKIKAGASLVQ+YT
Sbjct: 296 KGETGGLSGVPLKDMSTATVSDMYRLTNGKMTIVGVGGVSSGQDAYEKIKAGASLVQLYT 355
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+F Y GPPL ++IK ELE+LL+K+G++SVS+AVGA H+
Sbjct: 356 AFAYEGPPLPSKIKRELEDLLKKDGFSSVSEAVGADHR 393
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP 100
+Q ++ G+ K G Y V+NVSSPNT LR +Q + QL L++ VV TR+ L P P
Sbjct: 187 AVQDYVDGVKKLGCFGDYLVINVSSPNTPGLRAMQGRQQLAELIEQVVATRDLLPCTPKP 246
Query: 101 PILVKIAPDLSLDEKKDIADVVL---DSVKGIL 130
P+LVKIAPDL+ +K+DIA VV+ SV+GI+
Sbjct: 247 PVLVKIAPDLTQADKEDIAAVVMGKKGSVEGII 279
>gi|91091628|ref|XP_970031.1| PREDICTED: similar to dihydroorotate dehydrogenase, mitochondrial
[Tribolium castaneum]
Length = 391
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 163/218 (74%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D + D V GI K G VA Y V+NVSSPNT LR +Q K+ LK+LLK+ E
Sbjct: 174 VNLGKNKTSDDAINDYVIGIKKLGPVADYLVINVSSPNTPGLRTMQDKNVLKNLLKSAKE 233
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L PP+L+K+APDLS E KDIA+VV K+DGLI+ NTTV+R ++L
Sbjct: 234 ARDSLPEGARPPLLLKLAPDLSYSELKDIANVVRQKDTKIDGLIICNTTVERPQFLHNDR 293
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG+PLR ST+LI+EMYKLT+G++PIIGVGGVF+G+DA+EKIKAGAS+VQ+YT
Sbjct: 294 KGETGGLSGKPLREASTKLIAEMYKLTRGEIPIIGVGGVFTGRDAYEKIKAGASVVQLYT 353
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
S VY GPP+V +IK EL ELL +G+ +VS+AVG + K
Sbjct: 354 SLVYEGPPVVAKIKRELVELLADDGFKNVSEAVGCSVK 391
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++GI K G VA Y V+NVSSPNT LR +Q K+ LK+LLK+ E R+ L PP+L+
Sbjct: 189 YVIGIKKLGPVADYLVINVSSPNTPGLRTMQDKNVLKNLLKSAKEARDSLPEGARPPLLL 248
Query: 105 KIAPDLSLDEKKDIADVV 122
K+APDLS E KDIA+VV
Sbjct: 249 KLAPDLSYSELKDIANVV 266
>gi|242015242|ref|XP_002428276.1| Dihydroorotate dehydrogenase, putative [Pediculus humanus corporis]
gi|212512854|gb|EEB15538.1| Dihydroorotate dehydrogenase, putative [Pediculus humanus corporis]
Length = 398
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 167/216 (77%), Gaps = 1/216 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ + + D VKGI KF DVA YFV+NVSSPNT LR+ Q K QL+ LL ++E
Sbjct: 175 VNLGKNKNSTNPIDDYVKGIKKFSDVADYFVINVSSPNTPGLRQWQKKQQLEELLSALIE 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+N L V PP+L+K+APDL+ E+K+IADV+L K KVDGL++SNTT++R + +
Sbjct: 235 AKNNLNVDKKPPLLLKLAPDLTNVERKEIADVILTEKYKVDGLVISNTTIER-PGITSPI 293
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG+PL + ST+LIS+M+ T GK+PIIGVGGVF+G+DA+EKI+AGASL+Q+YT
Sbjct: 294 GDEKGGLSGQPLHDLSTKLISDMHHYTSGKIPIIGVGGVFTGQDAYEKIQAGASLIQLYT 353
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+F +HGPP + +IK EL+ELL+K+GY +S+AVG +
Sbjct: 354 AFAFHGPPRIVKIKKELDELLKKDGYEYLSEAVGKS 389
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI KF DVA YFV+NVSSPNT LR+ Q K QL+ LL ++E +N L + PP+L+
Sbjct: 190 YVKGIKKFSDVADYFVINVSSPNTPGLRQWQKKQQLEELLSALIEAKNNLNVDKKPPLLL 249
Query: 105 KIAPDLSLDEKKDIADVVL 123
K+APDL+ E+K+IADV+L
Sbjct: 250 KLAPDLTNVERKEIADVIL 268
>gi|156546747|ref|XP_001605089.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Nasonia vitripennis]
Length = 399
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 162/218 (74%), Gaps = 3/218 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D VLD V+GI KF DVA YFVVNVSSPNT LR LQ K +L+ LL V E
Sbjct: 180 VNLGKNKLALDPVLDYVEGIQKFSDVADYFVVNVSSPNTPGLRNLQGKKELEELLGKVNE 239
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++ + +P P+L+KIAPDL+ +E KD+A+V+ SK KVDG++VSNTT+ R +A
Sbjct: 240 ARDKASRRP--PLLLKIAPDLAEEELKDVAEVITKSKTKVDGIVVSNTTLRRENLFNAS- 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K+E GGLSG P+ ST++I+ MY+LT G++PI+GVGG+F G DA+ KIKAGASLVQIYT
Sbjct: 297 KDEAGGLSGAPVSELSTKMIARMYQLTGGRVPIVGVGGIFDGTDAYSKIKAGASLVQIYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
SF YHGPP+V +IK EL ELL+K+G+ + QAVG K
Sbjct: 357 SFAYHGPPIVPKIKRELAELLEKDGHEKIEQAVGKEAK 394
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI KF DVA YFVVNVSSPNT LR LQ K +L+ LL V E R++ + + PP+L+
Sbjct: 195 YVEGIQKFSDVADYFVVNVSSPNTPGLRNLQGKKELEELLGKVNEARDKASRR--PPLLL 252
Query: 105 KIAPDLSLDEKKDIADVVLDS---VKGIL 130
KIAPDL+ +E KD+A+V+ S V GI+
Sbjct: 253 KIAPDLAEEELKDVAEVITKSKTKVDGIV 281
>gi|346471659|gb|AEO35674.1| hypothetical protein [Amblyomma maculatum]
Length = 398
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 161/224 (71%), Gaps = 3/224 (1%)
Query: 106 IAP-DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL 164
+AP ++L K D V D V G+ +F DVA Y VVNVSSPNT LR LQ + L+ LL
Sbjct: 167 VAPVGVNLGRNKGSEDAVADYVAGVHRFADVADYLVVNVSSPNTPGLRSLQRRRHLEELL 226
Query: 165 KTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY 224
V+E RN L+ + P+L+KIAPDL+ EK DIA VV S+ KVDGL+V NTTV R +
Sbjct: 227 LKVIEARNSLSRQL--PVLLKIAPDLTDQEKADIAAVVTGSRAKVDGLVVCNTTVSRPDS 284
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L + ++ + GGLSG PLR+ ST I++MY+LTKG +PIIGVGGVF G+DA+ KI+AGAS
Sbjct: 285 LQSEHRSQAGGLSGRPLRDISTRTIADMYRLTKGSIPIIGVGGVFCGEDAYAKIRAGASA 344
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
VQ+Y+S +Y+GPP+V +K+EL ELL+++GY V AVGA H++
Sbjct: 345 VQLYSSLIYYGPPVVQTVKTELAELLRRDGYTRVQDAVGADHRN 388
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ +F DVA Y VVNVSSPNT LR LQ + L+ LL V+E RN L+ + P+L+
Sbjct: 187 YVAGVHRFADVADYLVVNVSSPNTPGLRSLQRRRHLEELLLKVIEARNSLSRQ--LPVLL 244
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL+ EK DIA VV S
Sbjct: 245 KIAPDLTDQEKADIAAVVTGS 265
>gi|195054329|ref|XP_001994078.1| GH22897 [Drosophila grimshawi]
gi|193895948|gb|EDV94814.1| GH22897 [Drosophila grimshawi]
Length = 406
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 154/217 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L +D + D V+G+L+ G VA Y VVNVSSPNT LR +Q K +L LL+ V
Sbjct: 185 VNLGRNRDSLTPISDYVQGVLELGPVADYLVVNVSSPNTKGLRDMQCKKELTTLLEAVTR 244
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +L P PIL+KI+PDL+LD+ KDI V+ +C+VDGLIVSNTTV R ++
Sbjct: 245 ARTELKTNPKVPILLKISPDLALDDLKDIVAVINTKQCRVDGLIVSNTTVARENISASKL 304
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSGEPLR +STELI++MY LTKG++PIIGVGGV SG DAFEKI+AGAS VQIYT
Sbjct: 305 ANETGGLSGEPLRQRSTELIAQMYALTKGRVPIIGVGGVASGHDAFEKIEAGASFVQIYT 364
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ VY GP LV RIK +L + L + G+ +V AVG+ H
Sbjct: 365 ALVYEGPDLVDRIKEDLSQQLNERGFKNVRDAVGSNH 401
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+L+ G VA Y VVNVSSPNT LR +Q K +L LL+ V R +L P PIL+
Sbjct: 200 YVQGVLELGPVADYLVVNVSSPNTKGLRDMQCKKELTTLLEAVTRARTELKTNPKVPILL 259
Query: 105 KIAPDLSLDEKKDIADVV 122
KI+PDL+LD+ KDI V+
Sbjct: 260 KISPDLALDDLKDIVAVI 277
>gi|56693287|ref|NP_001008608.1| dihydroorotate dehydrogenase, mitochondrial [Danio rerio]
gi|56269403|gb|AAH86819.1| Dihydroorotate dehydrogenase [Danio rerio]
gi|182890404|gb|AAI64266.1| Dhodh protein [Danio rerio]
Length = 407
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D V D V+G+ G +A Y VVNVSSPNT LR LQ K++L+HLL VV+
Sbjct: 178 INLGKNKLSPDAVSDYVEGVRTLGPLADYLVVNVSSPNTPGLRDLQGKEELRHLLDKVVK 237
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L ++ PP+LVKIAPDL+ +K+DIA+V+++ VDG++VSNTTV R + L
Sbjct: 238 ERDSLRIENRPPVLVKIAPDLTTQDKQDIAEVIME--VGVDGVMVSNTTVSRPDTLKDPN 295
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PL+ ST+ + EMY LT+GKLPI+GVGGV SG+DA +KI+AGASLVQ+YT
Sbjct: 296 RVETGGLSGQPLKELSTQTVREMYTLTQGKLPIVGVGGVASGQDAMDKIRAGASLVQLYT 355
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ VY GPP+V +IK EL++LL+ +G+ V++AVGA HK+
Sbjct: 356 ALVYQGPPVVNKIKRELDDLLKAQGFTCVAEAVGADHKT 394
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNT LR LQ K++L+HLL VV+ R+ L ++ PP+LV
Sbjct: 193 YVEGVRTLGPLADYLVVNVSSPNTPGLRDLQGKEELRHLLDKVVKERDSLRIENRPPVLV 252
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +K+DIA+V+++ V G++
Sbjct: 253 KIAPDLTTQDKQDIAEVIMEVGVDGVM 279
>gi|432851810|ref|XP_004067096.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Oryzias latipes]
Length = 399
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 180/272 (66%), Gaps = 15/272 (5%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A V+N N+ L ++Q + LK ET+ QL LP ++L +
Sbjct: 137 ADNAVINRYGFNSCGLAEVQTR------LKAREETQQQLTKTGLPL-------GINLGKN 183
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
K D D +G+ G +A Y VVNVSSPNT LR LQ K +L+ LL TV++ R+ L
Sbjct: 184 KLSQDAAADYKEGVKALGPLADYLVVNVSSPNTPGLRDLQGKAELRQLLCTVLKERDALP 243
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
PP+L+KIAPDL+ +K+DIADVV ++ VDGL+V+NTTV R E L K ETGG
Sbjct: 244 DAHRPPVLLKIAPDLTAQDKRDIADVV--AELGVDGLMVTNTTVSRPETLQDPLKYETGG 301
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG+PL+ ST + EMYKLTKGK+PIIG+GGV SG+DA +KI+AGASL+Q+YTS Y G
Sbjct: 302 LSGQPLKEMSTNTVREMYKLTKGKVPIIGIGGVASGQDAMDKIRAGASLIQLYTSLTYQG 361
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
PP+VT++K ELE+LL+ +G++ V++AVGA ++
Sbjct: 362 PPVVTKVKRELEDLLKDQGFSCVAEAVGADNR 393
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNT LR LQ K +L+ LL TV++ R+ L PP+L+KIA
Sbjct: 196 GVKALGPLADYLVVNVSSPNTPGLRDLQGKAELRQLLCTVLKERDALPDAHRPPVLLKIA 255
Query: 108 PDLSLDEKKDIADVVLD-SVKGIL 130
PDL+ +K+DIADVV + V G++
Sbjct: 256 PDLTAQDKRDIADVVAELGVDGLM 279
>gi|410913003|ref|XP_003969978.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Takifugu rubripes]
Length = 515
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D ++G+ G +A Y VVNVSSPNT LR LQ K +L LLKTV++
Sbjct: 178 INLGKNKLSQDAKADYLEGVRALGPLADYLVVNVSSPNTPGLRDLQGKAELHQLLKTVLK 237
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ + + PP+LVKIAPDL+ +K+DIADVV + VDGL+VSNTTV R L
Sbjct: 238 ERDAMQGECKPPVLVKIAPDLTAQDKQDIADVV--TVLGVDGLMVSNTTVSRPATLQDLQ 295
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG+PL++ +T + EMY+LTKGK+PI+G+GGV SG+DA +KI+AGASLVQ+YT
Sbjct: 296 KSEVGGLSGQPLKDLATNTVREMYRLTKGKIPIVGIGGVASGQDAMDKIRAGASLVQLYT 355
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ Y GPP+VTRIK ELE++L+++G+ SVS+AVGA H++
Sbjct: 356 ALTYQGPPVVTRIKRELEQILKEQGFGSVSEAVGADHRA 394
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L G+ G +A Y VVNVSSPNT LR LQ K +L LLKTV++ R+ + + PP+LV
Sbjct: 193 YLEGVRALGPLADYLVVNVSSPNTPGLRDLQGKAELHQLLKTVLKERDAMQGECKPPVLV 252
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
KIAPDL+ +K+DIADVV +V G V V N + A L+ LQ
Sbjct: 253 KIAPDLTAQDKQDIADVV--TVLG------VDGLMVSNTTVSRPATLQDLQ 295
>gi|156368128|ref|XP_001627548.1| predicted protein [Nematostella vectensis]
gi|156214461|gb|EDO35448.1| predicted protein [Nematostella vectensis]
Length = 397
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 155/218 (71%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ + K D V D VKG+ F +AHY V+N+SSPNT LR LQ +++L L+ +E
Sbjct: 178 INVGKNKTSPDAVSDYVKGVKCFSPLAHYLVINISSPNTPGLRALQGREELTQLIDNALE 237
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R Q + PP+LVKIAPDL+ ++K DIA V+ ++DGLIVSNTT+ R L +
Sbjct: 238 ARRQASPSAQPPLLVKIAPDLTEEDKIDIASVITRQGHQIDGLIVSNTTITRPSTLQSPN 297
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PLR ST + +MY+LT+GK+PIIGVGG+ SG+DA++KIKAGASLVQ+YT
Sbjct: 298 KTEQGGLSGAPLREMSTGAVGDMYRLTEGKIPIIGVGGISSGQDAYDKIKAGASLVQLYT 357
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V +IK EL ELL+K+G+ SV +AVG HK
Sbjct: 358 ALAYQGPPVVRKIKRELAELLRKDGFGSVQEAVGINHK 395
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ F +AHY V+N+SSPNT LR LQ +++L L+ +E R Q + PP+LV
Sbjct: 193 YVKGVKCFSPLAHYLVINISSPNTPGLRALQGREELTQLIDNALEARRQASPSAQPPLLV 252
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ ++K DIA V+
Sbjct: 253 KIAPDLTEEDKIDIASVI 270
>gi|71896199|ref|NP_001025575.1| dihydroorotate dehydrogenase (quinone) [Xenopus (Silurana)
tropicalis]
gi|60688133|gb|AAH91012.1| MGC107816 protein [Xenopus (Silurana) tropicalis]
Length = 401
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 156/219 (71%), Gaps = 2/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ + G +A Y V+NVSSPNT LR LQ +DQL+ LL VV+
Sbjct: 179 INLGKNKTSEDAAADYTQGLQQLGSLADYLVINVSSPNTPGLRNLQGRDQLRKLLTEVVK 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+RN L P P +LVKIAPDLS+ +K+DIA VV ++ +DGLI+SNTT+ R L
Sbjct: 239 SRNALQCDPKPALLVKIAPDLSMQDKEDIASVV--TEVGIDGLIISNTTISRPSSLQDPQ 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PLR+ +TE + EMY LT GK+PIIGVGGVFSG DA KI+AGASLVQ+YT
Sbjct: 297 KSEVGGLSGIPLRDLATETVREMYALTAGKIPIIGVGGVFSGLDALHKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ Y GPP+V ++ +EL++LL ++G+ VS AVGA H++
Sbjct: 357 ALTYQGPPVVGKVTTELDQLLVEQGFACVSDAVGADHRT 395
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ + G +A Y V+NVSSPNT LR LQ +DQL+ LL VV++RN L P P +LV
Sbjct: 194 YTQGLQQLGSLADYLVINVSSPNTPGLRNLQGRDQLRKLLTEVVKSRNALQCDPKPALLV 253
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDLS+ +K+DIA VV +
Sbjct: 254 KIAPDLSMQDKEDIASVVTE 273
>gi|209154834|gb|ACI33649.1| Dihydroorotate dehydrogenase, mitochondrial precursor [Salmo salar]
Length = 406
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D V D ++G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V++
Sbjct: 177 INLGKNKLSQDAVADYLEGVRTLGPLADYLVVNVSSPNTPGLRDLQGKGELRQLLYKVLK 236
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L PP+LVKIAPDL+ +K+DIADVV ++ VDGL+VSNTTV R E L
Sbjct: 237 ERDALQGGSRPPVLVKIAPDLTAQDKQDIADVV--TELGVDGLLVSNTTVSRPETLQDPQ 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG+P++ ST + EMY LTKGK+PIIGVGGV SG+DA +KI AGASLVQ+YT
Sbjct: 295 SKEVGGLSGQPIKELSTRTVREMYSLTKGKVPIIGVGGVASGQDALDKICAGASLVQLYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
S Y GPP+VT+IK ELE+LL+++G+ S+S AVGA H+
Sbjct: 355 SLTYQGPPVVTKIKRELEQLLKEQGFTSISDAVGADHRG 393
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V++ R+ L PP+LV
Sbjct: 192 YLEGVRTLGPLADYLVVNVSSPNTPGLRDLQGKGELRQLLYKVLKERDALQGGSRPPVLV 251
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +K+DIADVV + V G+L
Sbjct: 252 KIAPDLTAQDKQDIADVVTELGVDGLL 278
>gi|395508603|ref|XP_003758599.1| PREDICTED: LOW QUALITY PROTEIN: dihydroorotate dehydrogenase
(quinone), mitochondrial [Sarcophilus harrisii]
Length = 443
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 171/249 (68%), Gaps = 9/249 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ E +++L +P ++L + K +D D +G+ G +A Y
Sbjct: 204 VEHRLRARQEKQSKLTEDGMPL-------GINLGKNKSSSDAAADYAEGVRVMGPLADYL 256
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K++L+ LL V++ R+ L P +LVKIAPDL+ EKK+IA
Sbjct: 257 VVNVSSPNTAGLRNLQGKEELRQLLNKVLKERDALEGGHKPAVLVKIAPDLTAQEKKEIA 316
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLI++NTTV R L + E GGLSG+PLR+ ST+ +SEMY LT+GK
Sbjct: 317 SVVRE--VGIDGLIITNTTVSRPASLQGALRSEVGGLSGKPLRDMSTQTVSEMYSLTQGK 374
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGG+ SG+DA EKI+AGASLVQ+YT+F Y GPP++ +IK ELE LL+++G++ ++
Sbjct: 375 IPIIGVGGISSGQDALEKIRAGASLVQMYTAFTYGGPPVIGKIKRELEALLEEQGFSQLT 434
Query: 320 QAVGAAHKS 328
A+GA H+S
Sbjct: 435 DAIGADHRS 443
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ G +A Y VVNVSSPNTA LR LQ K++L+ LL V++ R+ L P +LV
Sbjct: 242 YAEGVRVMGPLADYLVVNVSSPNTAGLRNLQGKEELRQLLNKVLKERDALEGGHKPAVLV 301
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ EKK+IA VV
Sbjct: 302 KIAPDLTAQEKKEIASVV 319
>gi|395837009|ref|XP_003791438.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Otolemur garnettii]
Length = 408
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 155/218 (71%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++
Sbjct: 192 INLGKNKTSVDAASDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLTKVLQ 251
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + VDGLIV+NTTV R L
Sbjct: 252 ERDALQAAHRPAVLVKIAPDLTAQDKEDIASVV--RELGVDGLIVTNTTVSRPAGLQGAL 309
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 310 RSETGGLSGKPLRDLSTQTIREMYALTQGRIPIIGVGGVSSGQDALEKIRAGASLVQLYT 369
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPPLV R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 370 ALTYRGPPLVCRVKRELEALLKEQGFGRVTDAIGADHQ 407
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIA
Sbjct: 210 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQAAHRPAVLVKIA 269
Query: 108 PDLSLDEKKDIADVVLD-SVKGIL 130
PDL+ +K+DIA VV + V G++
Sbjct: 270 PDLTAQDKEDIASVVRELGVDGLI 293
>gi|391337091|ref|XP_003742907.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Metaseiulus occidentalis]
Length = 421
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+L + K D D +GI KFG A Y V+N+SSPNT LR LQ+K +L+ LL V+
Sbjct: 194 FNLGKNKTSDDAAADYCRGIAKFGKKADYIVINISSPNTPGLRALQSKRELEQLLTKVIS 253
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++L ++ P+L+KIAPDL +KKDIA+V+ +VDGLI+SNTTV R L +
Sbjct: 254 VRDELGLRV--PVLLKIAPDLLEQDKKDIAEVIQSRGSRVDGLIISNTTVSRPATLTSEN 311
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG PLR ST IS+MY LT G++PIIGVGG+FSG+DA+EKIKAGAS+VQIY+
Sbjct: 312 KSETGGLSGRPLRGLSTLAISDMYILTGGRVPIIGVGGIFSGEDAYEKIKAGASMVQIYS 371
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
S VY GPP+V IK EL + L+++GYN VS AVG+ H+
Sbjct: 372 SIVYRGPPIVETIKKELVQCLKEDGYNHVSDAVGSDHR 409
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ GI KFG A Y V+N+SSPNT LR LQ+K +L+ LL V+ R++L L+ P+L+
Sbjct: 209 YCRGIAKFGKKADYIVINISSPNTPGLRALQSKRELEQLLTKVISVRDELGLR--VPVLL 266
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL +KKDIA+V+
Sbjct: 267 KIAPDLLEQDKKDIAEVI 284
>gi|326927610|ref|XP_003209984.1| PREDICTED: dihydroorotate dehydrogenase, mitochondrial-like
[Meleagris gallopavo]
Length = 342
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 157/218 (72%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D V D V G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V+
Sbjct: 126 INLGKNKSSTDAVADYVAGVQTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLA 185
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + P +LVKIAPDL+ +K+DIA VV + VDGLIVSNTT+ R L +
Sbjct: 186 ERDMLPCERKPAVLVKIAPDLTEQDKQDIAGVVCE--VGVDGLIVSNTTISRPSGLQSTQ 243
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E+GGLSG+PLR ST+ + EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 244 RLESGGLSGKPLRELSTQTVREMYALTQGRVPIIGVGGVSSGRDALEKIRAGASLVQMYT 303
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VYHGPP+V +K ELEELL+++G+ SV +AVGA H+
Sbjct: 304 ALVYHGPPVVGAVKRELEELLREQGFKSVMEAVGADHR 341
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V+ R+ L + P +LV
Sbjct: 141 YVAGVQTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLAERDMLPCERKPAVLV 200
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +K+DIA VV + V G++
Sbjct: 201 KIAPDLTEQDKQDIAGVVCEVGVDGLI 227
>gi|327285484|ref|XP_003227463.1| PREDICTED: dihydroorotate dehydrogenase, mitochondrial-like [Anolis
carolinensis]
Length = 248
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V G+ K G +A Y VVNVSSPNT LR LQ K +L+ LL V+
Sbjct: 32 INLGKNKSSVDASADYVAGVQKLGPLADYLVVNVSSPNTPGLRNLQGKAELRLLLGKVLA 91
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L +P P +LVKIAPDL+ EK+DIA VV + VDGL+V+NTTV R + L +
Sbjct: 92 ERDALPAEPKPAVLVKIAPDLTAQEKQDIASVVCE--LGVDGLVVTNTTVSRPDSLHGAH 149
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++E GGLSG PLR STE + EMY LTKG++PIIGVGG+ SG+DA EKI+AGASLVQ+YT
Sbjct: 150 RDEVGGLSGPPLRPLSTETVREMYALTKGRVPIIGVGGICSGQDALEKIRAGASLVQLYT 209
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V +K EL LL+++G+ SV +AVGA H+
Sbjct: 210 ALAYQGPPVVWAVKQELAALLREQGFQSVQEAVGADHR 247
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ K G +A Y VVNVSSPNT LR LQ K +L+ LL V+ R+ L +P P +LV
Sbjct: 47 YVAGVQKLGPLADYLVVNVSSPNTPGLRNLQGKAELRLLLGKVLAERDALPAEPKPAVLV 106
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDL+ EK+DIA VV +
Sbjct: 107 KIAPDLTAQEKQDIASVVCE 126
>gi|347967051|ref|XP_321015.5| AGAP002037-PA [Anopheles gambiae str. PEST]
gi|333469781|gb|EAA01242.5| AGAP002037-PA [Anopheles gambiae str. PEST]
Length = 398
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 159/219 (72%)
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL 164
++A ++L + K D + D V+G+ +FG +A Y V+NVSSPNT LR +Q+K L+ LL
Sbjct: 172 RVALGINLGKNKLSLDAIADYVQGVKRFGTLADYLVINVSSPNTPGLRTMQSKSTLQTLL 231
Query: 165 KTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY 224
V++ R L PIL+K+APDLS ++ ++I DVV C VDGLIVSNTT+DR
Sbjct: 232 TEVLKARASLPANEQRPILLKLAPDLSEEDLREIVDVVRAKACAVDGLIVSNTTIDRPAT 291
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L + + GGLSG PL+++ST +I+ +YKLT+GK+PIIGVGG+F+G+DAFEKI+AGAS
Sbjct: 292 LRSVNAGQLGGLSGPPLKHRSTAMIARVYKLTEGKIPIIGVGGIFTGEDAFEKIEAGASA 351
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VQ+YTSF++HGPP+V +IK EL+ LL+ GY SV AVG
Sbjct: 352 VQLYTSFIFHGPPVVPKIKRELDRLLEANGYASVQDAVG 390
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ +FG +A Y V+NVSSPNT LR +Q+K L+ LL V++ R L PIL+
Sbjct: 192 YVQGVKRFGTLADYLVINVSSPNTPGLRTMQSKSTLQTLLTEVLKARASLPANEQRPILL 251
Query: 105 KIAPDLSLDEKKDIADVV 122
K+APDLS ++ ++I DVV
Sbjct: 252 KLAPDLSEEDLREIVDVV 269
>gi|383858492|ref|XP_003704735.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Megachile rotundata]
Length = 391
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D V D GI KF +VA YFV+NVSSPNT LR LQ+K L+HLL V E
Sbjct: 175 INLGKNKTSEDAVQDYADGIKKFSNVADYFVINVSSPNTPGLRSLQSKQDLEHLLTKVNE 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R ++ P+L+K+APDLS E+ DIA V+L K KVDGLI+ NTT+ R E L +
Sbjct: 235 VRQ--SIHSTQPLLLKLAPDLSDSERADIASVILKKKSKVDGLILCNTTITR-ENLVSPL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
KEE+GGLSG PL N ST +IS+MYK T+G +PIIGVGG+FSG+DA+ KIKAGASLVQ+YT
Sbjct: 292 KEESGGLSGAPLANMSTAMISDMYKRTRGTIPIIGVGGIFSGEDAYNKIKAGASLVQVYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SF Y GPP++ +IK EL+++L+++G S+ A+G
Sbjct: 352 SFTYLGPPIIGKIKRELDDMLKRDGLTSIRDAIG 385
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP 100
+Q + GI KF +VA YFV+NVSSPNT LR LQ+K L+HLL V E R ++
Sbjct: 186 AVQDYADGIKKFSNVADYFVINVSSPNTPGLRSLQSKQDLEHLLTKVNEVRQ--SIHSTQ 243
Query: 101 PILVKIAPDLSLDEKKDIADVVL 123
P+L+K+APDLS E+ DIA V+L
Sbjct: 244 PLLLKLAPDLSDSERADIASVIL 266
>gi|47507242|gb|AAH71019.1| LOC432093 protein, partial [Xenopus laevis]
Length = 406
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ + G +A Y V+NVSSPNT LR LQ ++QL+ LL VV+
Sbjct: 181 INLGKNKTSEDAAADYTQGLQQLGSLADYLVINVSSPNTPGLRNLQGREQLRKLLTEVVK 240
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
RN L P P +LVKIAPDLS +K+DIA VV ++ +DGLI+SNTT+ R L
Sbjct: 241 CRNALQCDPKPALLVKIAPDLSTRDKEDIASVV--TEVGIDGLIISNTTISRSTSLQDPQ 298
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PLR+ +TE + EMY LT GK+PIIGVGGVFSG DA +KI+AGASLVQ+YT
Sbjct: 299 SSEVGGLSGAPLRDLATETVREMYALTAGKIPIIGVGGVFSGLDALQKIRAGASLVQLYT 358
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V ++ EL++LL+++G++ VS AVGA H+
Sbjct: 359 ALTYQGPPVVGKVTRELDQLLREQGFSCVSDAVGADHR 396
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ + G +A Y V+NVSSPNT LR LQ ++QL+ LL VV+ RN L P P +LV
Sbjct: 196 YTQGLQQLGSLADYLVINVSSPNTPGLRNLQGREQLRKLLTEVVKCRNALQCDPKPALLV 255
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDLS +K+DIA VV +
Sbjct: 256 KIAPDLSTRDKEDIASVVTE 275
>gi|443683803|gb|ELT87928.1| hypothetical protein CAPTEDRAFT_175874 [Capitella teleta]
Length = 419
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 160/219 (73%), Gaps = 1/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D V D VKG+ +F D+A Y VVNVSSPNT LR +Q + +L+ LL VV
Sbjct: 201 INLGKNKTSNDAVGDYVKGVERFNDLADYLVVNVSSPNTPGLRAMQGRKELQTLLDAVVA 260
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+Q K PI+VKIAPDLS +K DIA VV K VDGLI+SNTT+ R + L +
Sbjct: 261 QRDQ-GHKKRTPIVVKIAPDLSQQDKIDIAAVVARPKSGVDGLIISNTTISRPKDLKSAS 319
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+EETGGLSG+PL++ ST+ I +MYKLT GKLPIIGVGGV SG+DA+ K+KAGASL+Q+Y+
Sbjct: 320 REETGGLSGQPLKDLSTQTIRDMYKLTHGKLPIIGVGGVSSGEDAYVKLKAGASLIQLYS 379
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ + GPPLV +IK EL EL++K+GY SVS+ VGA ++
Sbjct: 380 ALAFDGPPLVPKIKRELAELIKKDGYESVSEVVGADFRT 418
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ +F D+A Y VVNVSSPNT LR +Q + +L+ LL VV R+Q K PI+V
Sbjct: 216 YVKGVERFNDLADYLVVNVSSPNTPGLRAMQGRKELQTLLDAVVAQRDQ-GHKKRTPIVV 274
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGI 129
KIAPDLS +K DIA VV G+
Sbjct: 275 KIAPDLSQQDKIDIAAVVARPKSGV 299
>gi|325179609|emb|CCA14007.1| dihydroorotate dehydrogenase putative [Albugo laibachii Nc14]
Length = 451
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 162/220 (73%), Gaps = 4/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V G+ G+ A Y VVNVSSPNT LR LQ K+QL+ LL+ V E
Sbjct: 226 INLGKNKTTEDAASDYVAGVQVLGEFADYIVVNVSSPNTPGLRSLQGKEQLEKLLRRVHE 285
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ +AVK P+L+KIAPDLS +K+DIADV L+ +VDGLIVSNTT+ R +L +
Sbjct: 286 ARDAVAVKENRAIPLLLKIAPDLSNQDKQDIADVALE--LQVDGLIVSNTTLQRPTFLKS 343
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+KEE GGLSG PLR++ST+++S+MY LT+G++P+IGVGGV +G+D ++KIKAGA+LVQ+
Sbjct: 344 EHKEEAGGLSGAPLRDQSTKILSDMYSLTRGEIPLIGVGGVSTGQDVYDKIKAGATLVQM 403
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y+ +Y GP V R K EL ELL ++GY V+QA+GA+H+
Sbjct: 404 YSCLIYDGPLAVARAKKELAELLIRDGYEHVTQAIGASHR 443
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ G+ G+ A Y VVNVSSPNT LR LQ K+QL+ LL+ V E R+ +A+K P+
Sbjct: 241 YVAGVQVLGEFADYIVVNVSSPNTPGLRSLQGKEQLEKLLRRVHEARDAVAVKENRAIPL 300
Query: 103 LVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
L+KIAPDLS +K+DIADV L+ V G++
Sbjct: 301 LLKIAPDLSNQDKQDIADVALELQVDGLI 329
>gi|410983871|ref|XP_003998260.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Felis catus]
Length = 395
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 166/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ E + +L LP ++L + K D D V+G+ G +A Y
Sbjct: 156 VEHRLRARQEKQARLTEGGLPL-------GINLGKNKTSVDAAADYVEGVRVLGPLADYL 208
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNT LR LQ K +L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 209 VVNVSSPNTTGLRSLQGKAELRHLLTKVLQERDALQGPRKPAVLVKIAPDLTAQDKEDIA 268
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLI++NTTV R L + ETGGLSG+PLR+ ST+ I EMY LTKG+
Sbjct: 269 SVV--RELGIDGLIITNTTVSRPAVLQGALRSETGGLSGKPLRDLSTQTIREMYALTKGR 326
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V R+K ELE LL+++G+ ++
Sbjct: 327 VPIIGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGRVKRELEALLKEQGFTRIT 386
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 387 DAIGADHR 394
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNT LR LQ K +L+HLL V++ R+ L P +LV
Sbjct: 194 YVEGVRVLGPLADYLVVNVSSPNTTGLRSLQGKAELRHLLTKVLQERDALQGPRKPAVLV 253
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ +K+DIA VV
Sbjct: 254 KIAPDLTAQDKEDIASVV 271
>gi|312380217|gb|EFR26279.1| hypothetical protein AND_07777 [Anopheles darlingi]
Length = 388
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 159/214 (74%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K + V D V+GI +FG +A Y V+NVSSPNT LR +Q+K+ L+ LL V+
Sbjct: 167 INLGKNKLSQNAVQDYVQGIRRFGALADYLVINVSSPNTPGLRTMQSKNTLQTLLTEVLR 226
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P+L+K+APDLS ++ K+I DVV C VDGLIVSNTT+DR L +
Sbjct: 227 ARDSLPESDRRPVLLKLAPDLSDEDLKEIVDVVQLKACAVDGLIVSNTTIDRPPSLKSAN 286
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K + GGLSG PL+ +ST +I+++YKLT GK+PIIGVGG+F+G+DAFEKI+AGAS VQ+YT
Sbjct: 287 KGQLGGLSGPPLKQRSTVMIAKVYKLTGGKIPIIGVGGIFTGEDAFEKIEAGASAVQLYT 346
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SF++HGPP+V +IK EL+ LL++ GY +V +AVG
Sbjct: 347 SFIFHGPPVVNKIKLELDRLLEQNGYANVQEAVG 380
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
+Q ++ GI +FG +A Y V+NVSSPNT LR +Q+K+ L+ LL V+ R+ L P
Sbjct: 179 VQDYVQGIRRFGALADYLVINVSSPNTPGLRTMQSKNTLQTLLTEVLRARDSLPESDRRP 238
Query: 102 ILVKIAPDLSLDEKKDIADVV 122
+L+K+APDLS ++ K+I DVV
Sbjct: 239 VLLKLAPDLSDEDLKEIVDVV 259
>gi|56676360|ref|NP_001008553.1| dihydroorotate dehydrogenase (quinone), mitochondrial precursor
[Rattus norvegicus]
gi|2500042|sp|Q63707.1|PYRD_RAT RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|4379422|emb|CAA56765.1| dihydroorotate dehydrogenase [Rattus norvegicus]
Length = 395
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 166/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ + + QL LP ++L + K D D +G+ G +A Y
Sbjct: 156 VEHRLRARQQKQAQLTADGLPL-------GINLGKNKTSEDAAADYAEGVRTLGPLADYL 208
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 209 VVNVSSPNTAGLRSLQGKTELRHLLSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIA 268
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
V + +DGLIV+NTTV R L + ETGGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 269 SVA--RELGIDGLIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 326
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ ++ GPP+V R+K ELE LL++ G+ +V+
Sbjct: 327 IPIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEALLKERGFTTVT 386
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 387 DAIGADHR 394
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIA
Sbjct: 197 GVRTLGPLADYLVVNVSSPNTAGLRSLQGKTELRHLLSKVLQERDALKGTRKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADV 121
PDL+ +K+DIA V
Sbjct: 257 PDLTAQDKEDIASV 270
>gi|57524915|ref|NP_001006131.1| dihydroorotate dehydrogenase, mitochondrial precursor [Gallus
gallus]
gi|53136668|emb|CAG32663.1| hypothetical protein RCJMB04_32c16 [Gallus gallus]
Length = 387
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V+
Sbjct: 171 VNLGKNKSSTDAAADYVAGVQTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLA 230
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + P +LVKIAPDL+ +K+DIA VV + VDGLIVSNTT R L +
Sbjct: 231 ERDMLPSERKPAVLVKIAPDLTEQDKQDIAGVVCE--VGVDGLIVSNTTTSRPRGLQSTQ 288
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+PLR ST+ + EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 289 RLEAGGLSGKPLRELSTQTVREMYALTQGRVPIIGVGGVSSGRDALEKIRAGASLVQMYT 348
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VYHGPP+V +K ELEELL+++G+ SV +AVGA H+
Sbjct: 349 ALVYHGPPVVRTVKRELEELLREQGFKSVMEAVGADHR 386
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V+ R+ L + P +LV
Sbjct: 186 YVAGVQTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLAERDMLPSERKPAVLV 245
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
KIAPDL+ +K+DIA VV + V G++ VS+ T+ R LQ+ +L+
Sbjct: 246 KIAPDLTEQDKQDIAGVVCEVGVDGLI------------VSNTTTSRPRGLQSTQRLE 291
>gi|147903199|ref|NP_001085026.1| dihydroorotate dehydrogenase (quinone) [Xenopus laevis]
gi|67678237|gb|AAH97590.1| LOC432093 protein [Xenopus laevis]
Length = 404
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 153/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ + G +A Y V+NVSSPNT LR LQ ++QL+ LL VV+
Sbjct: 179 INLGKNKTSEDAAADYTQGLQQLGSLADYLVINVSSPNTPGLRNLQGREQLRKLLTEVVK 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
RN L P P +LVKIAPDLS +K+DIA VV ++ +DGLI+SNTT+ R L
Sbjct: 239 CRNALQCDPKPALLVKIAPDLSTRDKEDIASVV--TEVGIDGLIISNTTISRPTSLQDPQ 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PLR+ +TE + EMY LT GK+PIIGVGGVFSG DA +KI+AGASLVQ+YT
Sbjct: 297 SSEVGGLSGAPLRDLATETVREMYALTAGKIPIIGVGGVFSGLDALQKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V ++ EL++LL ++G++ VS AVGA H+
Sbjct: 357 ALTYQGPPVVGKVTRELDQLLCEQGFSCVSDAVGADHR 394
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ + G +A Y V+NVSSPNT LR LQ ++QL+ LL VV+ RN L P P +LV
Sbjct: 194 YTQGLQQLGSLADYLVINVSSPNTPGLRNLQGREQLRKLLTEVVKCRNALQCDPKPALLV 253
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDLS +K+DIA VV +
Sbjct: 254 KIAPDLSTRDKEDIASVVTE 273
>gi|198431796|ref|XP_002121690.1| PREDICTED: similar to dihydroorotate dehydrogenase [Ciona
intestinalis]
Length = 379
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 157/218 (72%), Gaps = 4/218 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D D G+ K G A Y V+NVSSPNT LR LQ + L+ L VV
Sbjct: 166 VNLGKNKESTDFTKDYTDGVTKLGKYADYIVINVSSPNTPGLRSLQGRQNLQDLCTNVVT 225
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ L KP ILVKIAPDL+ D+K+DIA +L SK VDGLIVSNTTV R L +
Sbjct: 226 VKEGLPNKP--SILVKIAPDLTEDDKQDIAYALLQSK--VDGLIVSNTTVARPSTLVNSH 281
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG+PL ST+L+++MYKLT GKLPIIGVGG+++GKDA++KIKAGASL+QIYT
Sbjct: 282 KSERGGLSGKPLCEVSTKLVADMYKLTDGKLPIIGVGGIWNGKDAYDKIKAGASLIQIYT 341
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
S +Y GPPLV +IK EL +LL+K+G+ +V++AVGA HK
Sbjct: 342 SLIYEGPPLVGKIKRELNQLLEKDGFTNVAEAVGADHK 379
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ K G A Y V+NVSSPNT LR LQ + L+ L VV + L K P ILVKIA
Sbjct: 184 GVTKLGKYADYIVINVSSPNTPGLRSLQGRQNLQDLCTNVVTVKEGLPNK--PSILVKIA 241
Query: 108 PDLSLDEKKDIADVVLDS-VKGIL 130
PDL+ D+K+DIA +L S V G++
Sbjct: 242 PDLTEDDKQDIAYALLQSKVDGLI 265
>gi|47169292|pdb|1UUM|A Chain A, Rat Dihydroorotate Dehydrogenase (Dhod)in Complex With
Atovaquone
gi|47169293|pdb|1UUM|B Chain B, Rat Dihydroorotate Dehydrogenase (Dhod)in Complex With
Atovaquone
gi|47169294|pdb|1UUO|A Chain A, Rat Dihydroorotate Dehydrogenase (Dhod)in Complex With
Brequinar
Length = 372
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 166/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ + + QL LP ++L + K D D +G+ G +A Y
Sbjct: 133 VEHRLRARQQKQAQLTADGLPL-------GINLGKNKTSEDAAADYAEGVRTLGPLADYL 185
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 186 VVNVSSPNTAGLRSLQGKTELRHLLSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIA 245
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
V + +DGLIV+NTTV R L + ETGGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 246 SVA--RELGIDGLIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 303
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ ++ GPP+V R+K ELE LL++ G+ +V+
Sbjct: 304 IPIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEALLKERGFTTVT 363
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 364 DAIGADHR 371
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LV
Sbjct: 171 YAEGVRTLGPLADYLVVNVSSPNTAGLRSLQGKTELRHLLSKVLQERDALKGTRKPAVLV 230
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ +K+DIA V
Sbjct: 231 KIAPDLTAQDKEDIASVA 248
>gi|354477818|ref|XP_003501115.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Cricetulus griseus]
gi|344248033|gb|EGW04137.1| Dihydroorotate dehydrogenase, mitochondrial [Cricetulus griseus]
Length = 395
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 167/248 (67%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ + +N+L LP ++L + K D D V+G+ G +A Y
Sbjct: 156 VEHRLRARQQKQNKLTADGLPL-------GINLGKNKTSEDAAADYVEGVRVLGPLADYL 208
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 209 VVNVSSPNTAGLRSLQGKAELRRLLAKVLQERDALKGAQKPAVLVKIAPDLTAQDKEDIA 268
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
V + +DGLIV+NTTV R L + E GGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 269 SVA--RELGIDGLIVTNTTVSRPTGLQGALRSEMGGLSGKPLRDLSTQTIREMYTLTQGR 326
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ + GPP+V R+K ELE LL++ G+N+V+
Sbjct: 327 IPIIGVGGVSSGQDALEKIQAGASLVQLYTALTFLGPPVVVRVKRELEALLKERGFNTVT 386
Query: 320 QAVGAAHK 327
+A+GA H+
Sbjct: 387 EAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LV
Sbjct: 194 YVEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLAKVLQERDALKGAQKPAVLV 253
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ +K+DIA V
Sbjct: 254 KIAPDLTAQDKEDIASVA 271
>gi|427783307|gb|JAA57105.1| Putative dihydroorotate dehydrogenase [Rhipicephalus pulchellus]
Length = 385
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 158/218 (72%), Gaps = 4/218 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ D D V G+ +F D+A Y VVNVSSPNT LR LQ + LK LL V+E
Sbjct: 171 VNLGRNKESVDAQADYVAGVRRFSDLADYLVVNVSSPNTPGLRTLQRRHHLKDLLLKVLE 230
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ A + P+LVKIAPDL+ +EK DIA VV ++ KVDGL+V NTTV R L + Y
Sbjct: 231 ARDSQARRL--PVLVKIAPDLTDEEKADIAAVV--TETKVDGLVVCNTTVSRPSSLRSEY 286
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PLR+ ST+ IS++Y+LTKG +PI+GVGGVFSG+DA+ KI+AGAS +Q+YT
Sbjct: 287 RSEPGGLSGRPLRDLSTQTISDLYRLTKGSIPIVGVGGVFSGEDAYAKIRAGASAIQLYT 346
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ +Y+GPP+V +K++L +LL+K+GY + AVGA H+
Sbjct: 347 ALIYNGPPVVRTVKAQLADLLRKDGYARIQDAVGADHR 384
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ +F D+A Y VVNVSSPNT LR LQ + LK LL V+E R+ A + P+LV
Sbjct: 186 YVAGVRRFSDLADYLVVNVSSPNTPGLRTLQRRHHLKDLLLKVLEARDSQARR--LPVLV 243
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL+ +EK DIA VV ++
Sbjct: 244 KIAPDLTDEEKADIAAVVTET 264
>gi|350415224|ref|XP_003490571.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Bombus impatiens]
Length = 391
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 153/214 (71%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D + GI KF DVA YFV+N+SSPNT LR LQ K +L+ LL +
Sbjct: 175 VNLGKNKTSDDAAQDYIDGIKKFADVADYFVINISSPNTPGLRTLQNKKELEDLLIKINN 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + K P+L+K+APDLS EK+DIADV+L VDGLI+ NTTV R L +
Sbjct: 235 VRQSIQCKQ--PLLLKLAPDLSDSEKQDIADVILQQSSSVDGLILCNTTVTRNN-LASAL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
KEETGGLSG PL + ST +IS+MYK TKG +PIIGVGG+F+G+DA+ KIKAGASLVQ+YT
Sbjct: 292 KEETGGLSGAPLADMSTAMISDMYKRTKGTIPIIGVGGIFTGEDAYNKIKAGASLVQVYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SF Y GPP++ +IK EL+++L+K+G S+ A+G
Sbjct: 352 SFTYQGPPVIGKIKRELDDILKKDGLQSIKDAIG 385
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI 102
Q ++ GI KF DVA YFV+N+SSPNT LR LQ K +L+ LL + R + K P+
Sbjct: 188 QDYIDGIKKFADVADYFVINISSPNTPGLRTLQNKKELEDLLIKINNVRQSIQCK--QPL 245
Query: 103 LVKIAPDLSLDEKKDIADVVLD---SVKGIL 130
L+K+APDLS EK+DIADV+L SV G++
Sbjct: 246 LLKLAPDLSDSEKQDIADVILQQSSSVDGLI 276
>gi|149699780|ref|XP_001497901.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Equus caballus]
Length = 435
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 155/217 (71%), Gaps = 2/217 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K AD LD +G+ G +A Y VVNVSSPNTA LR LQ + +L+ LL V++
Sbjct: 179 INLGKNKTSADAALDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGRAELRCLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + VDGLIV+NTTV R L
Sbjct: 239 ERDALKGAHKPAVLVKIAPDLTAQDKEDIASVV--RELGVDGLIVTNTTVSRPASLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ + GPP+V R+K ELE LL+++G+ ++ A+GA H
Sbjct: 357 ALTFQGPPVVGRVKRELEALLKEQGFTRITDAIGADH 393
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ + +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGRAELRCLLTKVLQERDALKGAHKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVVLD-SVKGIL 130
PDL+ +K+DIA VV + V G++
Sbjct: 257 PDLTAQDKEDIASVVRELGVDGLI 280
>gi|348572445|ref|XP_003472003.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Cavia porcellus]
Length = 395
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +GI G +A Y VVNVSSPNT LR LQ K +L+ LL V++
Sbjct: 179 INLGKNKTSVDAAADYAEGIRVLGPLADYLVVNVSSPNTPGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R + L
Sbjct: 239 ERDALQRAQKPAVLVKIAPDLTAQDKEDIAGVV--RELGIDGLIVTNTTVSRPDGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG PLR+ STE I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGRPLRSLSTETIREMYALTQGRIPIIGVGGVSSGQDALEKIQAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V R+K ELE LL+++G++ V+ A+GA H+
Sbjct: 357 ALTYGGPPVVGRVKRELEALLKEQGFSRVTDAIGADHQ 394
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 50/75 (66%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
GI G +A Y VVNVSSPNT LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GIRVLGPLADYLVVNVSSPNTPGLRSLQGKAELRRLLTKVLQERDALQRAQKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIAGVV 271
>gi|332017492|gb|EGI58213.1| Dihydroorotate dehydrogenase, mitochondrial [Acromyrmex echinatior]
Length = 391
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 155/214 (72%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ DV+ D + GI KF DVA YFV+N+SSPNT LR LQ K L+ LL +
Sbjct: 175 VNLGSNKETKDVIQDYIDGIKKFMDVADYFVINISSPNTPGLRSLQNKKNLEELLTRINV 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + K P+L+K+APDLS E++D+ADVVL K +VDGLI+ NTT+ R ++
Sbjct: 235 ARESVGSKQ--PLLLKLAPDLSNSERQDVADVVLSKKSRVDGLILCNTTITRTNLINPN- 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K+E+GGLSG PL + ST +IS+MYK T G +PIIGVGGVFSG D + KI+AGASLVQ+YT
Sbjct: 292 KQESGGLSGAPLTDISTAMISDMYKRTHGSIPIIGVGGVFSGTDVYVKIRAGASLVQLYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
S++YHGPP+V +IK EL E+L+ G++SV+ A+G
Sbjct: 352 SYIYHGPPVVGKIKKELCEILETNGFSSVTDAIG 385
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP 100
V+Q ++ GI KF DVA YFV+N+SSPNT LR LQ K L+ LL + R + K
Sbjct: 186 VIQDYIDGIKKFMDVADYFVINISSPNTPGLRSLQNKKNLEELLTRINVARESVGSK--Q 243
Query: 101 PILVKIAPDLSLDEKKDIADVVL 123
P+L+K+APDLS E++D+ADVVL
Sbjct: 244 PLLLKLAPDLSNSERQDVADVVL 266
>gi|334313045|ref|XP_001378648.2| PREDICTED: dihydroorotate dehydrogenase, mitochondrial-like
[Monodelphis domestica]
Length = 516
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 157/218 (72%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ G +A Y VVNVSSPNTA LR LQ KD+L+ LL V++
Sbjct: 300 INLGKNKSSLDAAADYVEGVRVMGPLADYLVVNVSSPNTAGLRNLQGKDELRLLLTKVLK 359
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ EK++IA VV + +DGLI++NTTV R L
Sbjct: 360 ERDALQGGHKPAVLVKIAPDLTTQEKREIASVV--KELGIDGLIITNTTVSRPASLQGAL 417
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PLR+ +T+ +SEMY LT+GK+PIIGVGG+ SG+DA EKI+AGASLVQ+YT
Sbjct: 418 RSEVGGLSGRPLRDLATQTVSEMYLLTQGKIPIIGVGGISSGQDALEKIRAGASLVQMYT 477
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+F Y GPP+V ++K ELE LL+++G++ ++ A+GA H+
Sbjct: 478 AFTYGGPPVVRKVKRELEALLKEQGFSQLTDAIGADHR 515
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNTA LR LQ KD+L+ LL V++ R+ L P +LV
Sbjct: 315 YVEGVRVMGPLADYLVVNVSSPNTAGLRNLQGKDELRLLLTKVLKERDALQGGHKPAVLV 374
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ EK++IA VV
Sbjct: 375 KIAPDLTTQEKREIASVV 392
>gi|403298388|ref|XP_003940004.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Saimiri boliviensis boliviensis]
Length = 395
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K AD D +G+ G +A Y VVNVSSPNT LR LQ K QL+ LL V++
Sbjct: 179 VNLGKNKTSADAAADYAEGVRVLGPLADYLVVNVSSPNTTGLRSLQGKAQLRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDALQGVHRPAVLVKIAPDLTTQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V RIK ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGRIKRELEALLKEQGFGRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 50/75 (66%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNT LR LQ K QL+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTTGLRSLQGKAQLRRLLTKVLQERDALQGVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTTQDKEDIASVV 271
>gi|26326797|dbj|BAC27142.1| unnamed protein product [Mus musculus]
Length = 290
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 164/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ + + QL LP ++L + K D D V+G+ G +A Y
Sbjct: 51 VEHRLRARQQKQTQLTTDGLPL-------GINLGKNKTSVDAAADYVEGVRILGPLADYL 103
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 104 VVNVSSPNTAGLRSLQGKTELRRLLSKVLQERDALKGPQKPAVLVKIAPDLTAQDKEDIA 163
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
V + +DGLI++NTTV R L + ETGGLSG+PLR+ ST+ I EMY LT+G
Sbjct: 164 SVA--RELGIDGLIITNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGT 221
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ + GPP+V R+K ELE LL++ G+N+V+
Sbjct: 222 IPIIGVGGVSSGQDALEKIQAGASLVQLYTALTFLGPPVVARVKRELEALLKERGFNTVT 281
Query: 320 QAVGAAHK 327
A+G H+
Sbjct: 282 DAIGVDHR 289
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LV
Sbjct: 89 YVEGVRILGPLADYLVVNVSSPNTAGLRSLQGKTELRRLLSKVLQERDALKGPQKPAVLV 148
Query: 105 KIAPDLSLDEKKDIADV 121
KIAPDL+ +K+DIA V
Sbjct: 149 KIAPDLTAQDKEDIASV 165
>gi|344290762|ref|XP_003417106.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Loxodonta africana]
Length = 395
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 156/218 (71%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L +LL V++
Sbjct: 179 VNLGKNKTSVDAAADYTEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAKLHNLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTT+ R L
Sbjct: 239 ERDALKGAHKPAVLVKIAPDLTAQDKEDIAGVV--RELGIDGLIVTNTTLSRPASLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGA LVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYTLTQGRVPIIGVGGVSSGQDALEKIRAGACLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V R+K ELE LL+++G++S+++A+GA H+
Sbjct: 357 ALTYQGPPVVGRVKQELEALLKEQGFSSITEAIGADHR 394
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L +LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAKLHNLLTKVLQERDALKGAHKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIAGVV 271
>gi|9910194|ref|NP_064430.1| dihydroorotate dehydrogenase (quinone), mitochondrial precursor
[Mus musculus]
gi|17367962|sp|O35435.2|PYRD_MOUSE RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|8784074|gb|AAB82948.2| dihydroorotate dehydrogenase [Mus musculus]
gi|18043400|gb|AAH19542.1| Dihydroorotate dehydrogenase [Mus musculus]
gi|20379848|gb|AAH27829.1| Dihydroorotate dehydrogenase [Mus musculus]
gi|28175189|gb|AAH45206.1| Dihydroorotate dehydrogenase [Mus musculus]
gi|148679478|gb|EDL11425.1| dihydroorotate dehydrogenase [Mus musculus]
Length = 395
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 164/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ + + QL LP ++L + K D D V+G+ G +A Y
Sbjct: 156 VEHRLRARQQKQTQLTTDGLPL-------GINLGKNKTSVDAAADYVEGVRILGPLADYL 208
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 209 VVNVSSPNTAGLRSLQGKTELRRLLSKVLQERDALKGPQKPAVLVKIAPDLTAQDKEDIA 268
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
V + +DGLI++NTTV R L + ETGGLSG+PLR+ ST+ I EMY LT+G
Sbjct: 269 SVA--RELGIDGLIITNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGT 326
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ + GPP+V R+K ELE LL++ G+N+V+
Sbjct: 327 IPIIGVGGVSSGQDALEKIQAGASLVQLYTALTFLGPPVVARVKRELEALLKERGFNTVT 386
Query: 320 QAVGAAHK 327
A+G H+
Sbjct: 387 DAIGVDHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LV
Sbjct: 194 YVEGVRILGPLADYLVVNVSSPNTAGLRSLQGKTELRRLLSKVLQERDALKGPQKPAVLV 253
Query: 105 KIAPDLSLDEKKDIADV 121
KIAPDL+ +K+DIA V
Sbjct: 254 KIAPDLTAQDKEDIASV 270
>gi|307180808|gb|EFN68672.1| Dihydroorotate dehydrogenase, mitochondrial [Camponotus floridanus]
Length = 767
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 156/214 (72%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D V D + GI +F DVA YFV+NVSSPNT +LR Q K L+ LL +
Sbjct: 551 VNLGKNKETNDAVQDYIDGIKRFMDVADYFVINVSSPNTPDLRSWQNKKNLEQLLTRINV 610
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R L K P+L+K+APDLS E++D+ADV+L K KVDGL++ NTT+ R +++
Sbjct: 611 ARELLNSKQ--PLLLKLAPDLSDSERQDVADVILKKKSKVDGLVLCNTTIMRPNLINSN- 667
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
KEE+GGLSG PL + ST +IS+MYK T G +PIIGVGG+FSG DA+ KIKAGASL+Q+YT
Sbjct: 668 KEESGGLSGAPLADISTAIISDMYKRTHGSIPIIGVGGIFSGADAYIKIKAGASLIQLYT 727
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SFVY+GPP+V +IK EL E+L+ G++SV+ VG
Sbjct: 728 SFVYNGPPIVDKIKRELCEILETNGFSSVTDVVG 761
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
+Q ++ GI +F DVA YFV+NVSSPNT +LR Q K L+ LL + R L K P
Sbjct: 563 VQDYIDGIKRFMDVADYFVINVSSPNTPDLRSWQNKKNLEQLLTRINVARELLNSK--QP 620
Query: 102 ILVKIAPDLSLDEKKDIADVVL 123
+L+K+APDLS E++D+ADV+L
Sbjct: 621 LLLKLAPDLSDSERQDVADVIL 642
>gi|296231490|ref|XP_002761166.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Callithrix jacchus]
Length = 395
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 155/218 (71%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K AD D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSADATADYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDALQGVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLRGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYTLTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALQGVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|291390422|ref|XP_002711734.1| PREDICTED: dihydroorotate dehydrogenase-like [Oryctolagus
cuniculus]
Length = 395
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 155/218 (71%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K AD D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 INLGKNKTSADAATDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRCLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLI++NTTV R L
Sbjct: 239 ERDALKGAHKPAVLVKIAPDLTAQDKEDIASVV--RELGIDGLIITNTTVSRPASLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+PLR+ ST+ I EMY LT+GK+PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSEAGGLSGKPLRDLSTQTIREMYALTQGKIPIIGVGGVSSGQDALEKIQAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V ++K ELE LL+++G++ V+ A+GA H+
Sbjct: 357 ALTYCGPPVVGKVKRELEALLKEQGFSRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRCLLTKVLQERDALKGAHKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|384945616|gb|AFI36413.1| dihydroorotate dehydrogenase (quinone), mitochondrial precursor
[Macaca mulatta]
Length = 395
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLQGAHRPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQGAHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|340725498|ref|XP_003401106.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Bombus terrestris]
Length = 391
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 153/214 (71%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K + D + GI KF DVA YFV+N+SSPNT LR LQ K +L+ LL +
Sbjct: 175 VNLGKNKTSDNAAQDYIDGIKKFADVADYFVINISSPNTPGLRTLQNKKELEDLLIKINN 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + K P+L+K+APDLS EK+DIADV+L VDGLI+ NTTV R L +
Sbjct: 235 VRQSVQCKQ--PLLLKLAPDLSDSEKQDIADVILQQSSSVDGLILCNTTVTRNN-LVSPL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
KEETGGLSG PL + ST +IS+MYK TKG +PIIGVGG+F+G+DA+ KIKAGASLVQ+YT
Sbjct: 292 KEETGGLSGAPLADMSTAMISDMYKRTKGTIPIIGVGGIFTGEDAYNKIKAGASLVQVYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SF Y GPP++ +IK EL+++L+K+G S+ A+G
Sbjct: 352 SFTYRGPPVIGKIKRELDDILKKDGLQSIKDAIG 385
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI 102
Q ++ GI KF DVA YFV+N+SSPNT LR LQ K +L+ LL + R + K P+
Sbjct: 188 QDYIDGIKKFADVADYFVINISSPNTPGLRTLQNKKELEDLLIKINNVRQSVQCK--QPL 245
Query: 103 LVKIAPDLSLDEKKDIADVVLD---SVKGIL 130
L+K+APDLS EK+DIADV+L SV G++
Sbjct: 246 LLKLAPDLSDSEKQDIADVILQQSSSVDGLI 276
>gi|383416261|gb|AFH31344.1| dihydroorotate dehydrogenase (quinone), mitochondrial precursor
[Macaca mulatta]
Length = 395
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLQGAHRPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQGAHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|109129102|ref|XP_001104448.1| PREDICTED: dihydroorotate dehydrogenase, mitochondrial isoform 2
[Macaca mulatta]
Length = 395
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLQGAHRPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQGAHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|380796769|gb|AFE70260.1| dihydroorotate dehydrogenase (quinone), mitochondrial, partial
[Macaca mulatta]
Length = 392
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 176 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 235
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 236 ERDGLQGAHRPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 293
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 294 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 353
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 354 ALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 391
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 194 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQGAHRPAVLVKIA 253
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 254 PDLTAQDKEDIASVV 268
>gi|402908912|ref|XP_003917175.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Papio anubis]
Length = 395
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLQGAHRPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQGAHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|426242603|ref|XP_004015161.1| PREDICTED: LOW QUALITY PROTEIN: dihydroorotate dehydrogenase
(quinone), mitochondrial [Ovis aries]
Length = 393
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 164/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ +T+ +L LP ++L + K D D KG+ G +A Y
Sbjct: 154 VEHRLRARQQTQARLTEDGLPL-------GINLGKNKTSVDAASDYAKGVRVLGPLADYL 206
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNT LR+LQ K +L+ LL V++ R+ L V P +LVKIAPDL+ K+DIA
Sbjct: 207 VVNVSSPNTGGLRRLQGKVELRRLLTKVLQERDALKVAHKPAVLVKIAPDLTAQGKEDIA 266
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+NTTV R L + E GGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 267 SVV--RELGIDGLIVTNTTVSRPASLQGALRSEPGGLSGKPLRDLSTQTIREMYALTQGR 324
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PI+GVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V +K ELE LL+++G+ V+
Sbjct: 325 VPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELEALLKEQGFARVT 384
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 385 DAIGADHR 392
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNT LR+LQ K +L+ LL V++ R+ L + P +LVKIA
Sbjct: 195 GVRVLGPLADYLVVNVSSPNTGGLRRLQGKVELRRLLTKVLQERDALKVAHKPAVLVKIA 254
Query: 108 PDLSLDEKKDIADVV 122
PDL+ K+DIA VV
Sbjct: 255 PDLTAQGKEDIASVV 269
>gi|359075217|ref|XP_003587264.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Bos taurus]
Length = 322
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 164/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ T+ +L LP ++L + K D D +G+ G +A Y
Sbjct: 83 VEHRLRARQHTQARLTEDGLPL-------GINLGKNKTSVDAASDYAEGVRVLGPLADYL 135
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L V P +LVKIAPDL+ +K+DIA
Sbjct: 136 VVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIAPDLTAQDKEDIA 195
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+N+TV R L + E GGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 196 SVV--RELGIDGLIVTNSTVSRPASLQGALRSEPGGLSGKPLRDLSTQTIREMYALTQGR 253
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PI+GVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V +K ELE LL+++G+ V+
Sbjct: 254 VPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELEALLKEQGFARVT 313
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 314 DAIGADHR 321
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L + P +LVKIA
Sbjct: 124 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIA 183
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 184 PDLTAQDKEDIASVV 198
>gi|449282449|gb|EMC89282.1| Dihydroorotate dehydrogenase, mitochondrial, partial [Columba
livia]
Length = 317
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 153/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V+
Sbjct: 101 VNLGKNKSSTDAAADYVAGVRMLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLA 160
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + P +LVKIAPDL+ +K+DIA V+ + VDGLIVSN TV R L +
Sbjct: 161 ERDALPCERKPAVLVKIAPDLTTQDKQDIASVICE--LGVDGLIVSNRTVSRPSGLRSPL 218
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+PLR ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 219 RTEPGGLSGKPLRELSTQTIREMYSLTQGQVPIIGVGGVSSGRDALEKIRAGASLVQMYT 278
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GPP+V +K ELE+LL+++G+ +V +AVGA H+
Sbjct: 279 ALVYRGPPVVGAVKRELEQLLREQGFQNVMEAVGADHR 316
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNT LR LQ K +L+ LL V+ R+ L + P +LV
Sbjct: 116 YVAGVRMLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLTKVLAERDALPCERKPAVLV 175
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +K+DIA V+ + V G++
Sbjct: 176 KIAPDLTTQDKQDIASVICELGVDGLI 202
>gi|62751827|ref|NP_001015650.1| dihydroorotate dehydrogenase (quinone), mitochondrial precursor
[Bos taurus]
gi|75057853|sp|Q5E9W3.1|PYRD_BOVIN RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|59857979|gb|AAX08824.1| dihydroorotate dehydrogenase precursor [Bos taurus]
gi|112362407|gb|AAI20338.1| Dihydroorotate dehydrogenase [Bos taurus]
Length = 395
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 165/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ +T+ +L LP ++L + K D D +G+ G +A Y
Sbjct: 156 VEHRLRARQQTQARLTEDGLPL-------GINLGKNKTSVDAASDYAEGVRVLGPLADYL 208
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L V P +LVKIAPDL+ +K+DIA
Sbjct: 209 VVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIAPDLTAQDKEDIA 268
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+N+TV R L + E GGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 269 SVV--RELGIDGLIVTNSTVSRPASLQGALRSEPGGLSGKPLRDLSTQTIREMYALTQGR 326
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PI+GVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V +K ELE LL+++G+ V+
Sbjct: 327 VPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELEALLKEQGFARVT 386
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 387 DAIGADHR 394
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L + P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|170031383|ref|XP_001843565.1| dihydroorotate dehydrogenase, mitochondrial [Culex
quinquefasciatus]
gi|167869825|gb|EDS33208.1| dihydroorotate dehydrogenase, mitochondrial [Culex
quinquefasciatus]
Length = 397
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 154/220 (70%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+K+ ++L K D + D V+GI KF +A Y VVN+SSPNT LR +Q K L+ L
Sbjct: 171 LKVTLGINLGRNKKSEDNIEDYVQGIRKFSVLADYLVVNISSPNTPGLRTMQNKSTLQSL 230
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
L +V+ RN L PILVKIAPDLS ++I V+ +C +DGLIVSNTT+DR
Sbjct: 231 LTEIVKARNALPPNEQRPILVKIAPDLSDGCVQEIIAVIQKKECAIDGLIVSNTTIDRPS 290
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
L + + GGLSG PL +KST+L++++YK T G++PIIGVGG+FSG+DA+EKI AGAS
Sbjct: 291 ELKSINAGQLGGLSGAPLSSKSTQLVAKVYKWTGGRVPIIGVGGIFSGRDAYEKILAGAS 350
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VQ+YT+ +YHGPP+V R+K EL +LL++ GY +V QAVG
Sbjct: 351 AVQLYTALIYHGPPIVARVKEELGQLLKENGYENVQQAVG 390
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
++ ++ GI KF +A Y VVN+SSPNT LR +Q K L+ LL +V+ RN L P
Sbjct: 189 IEDYVQGIRKFSVLADYLVVNISSPNTPGLRTMQNKSTLQSLLTEIVKARNALPPNEQRP 248
Query: 102 ILVKIAPDLSLDEKKDIADVV 122
ILVKIAPDLS ++I V+
Sbjct: 249 ILVKIAPDLSDGCVQEIIAVI 269
>gi|47210631|emb|CAF94445.1| unnamed protein product [Tetraodon nigroviridis]
Length = 415
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 162/245 (66%), Gaps = 28/245 (11%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D ++G+ G +A Y VVNVSSPNT LR LQ K +L LLKTV++
Sbjct: 173 VNLGKNKLSQDAKADYLEGVRALGPLADYLVVNVSSPNTPGLRDLQGKAELHQLLKTVMK 232
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ + + PP+LVKIAPDL+ +K+DIADVV + VDGL+VSNTTV R E L +
Sbjct: 233 ERDAMQGECKPPVLVKIAPDLTAQDKQDIADVV--TALGVDGLMVSNTTVSRPETLQDQQ 290
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKG--------------------------KLPII 263
+ E GGLSG+PL+ ST + EMY LT+G K+PI+
Sbjct: 291 RAELGGLSGQPLKELSTNTVREMYSLTRGTPPSTSPRVVINRAHGENSLLCDFIGKIPIV 350
Query: 264 GVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
G+GGV SG+DA +KI+AGASLVQ+YT+ Y GPP+VTRIK ELE+LL+++G++S+S+AVG
Sbjct: 351 GIGGVASGQDAMDKIRAGASLVQLYTALTYQGPPVVTRIKRELEQLLKEQGFSSISEAVG 410
Query: 324 AAHKS 328
A H+
Sbjct: 411 ADHRG 415
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L G+ G +A Y VVNVSSPNT LR LQ K +L LLKTV++ R+ + + PP+LV
Sbjct: 188 YLEGVRALGPLADYLVVNVSSPNTPGLRDLQGKAELHQLLKTVMKERDAMQGECKPPVLV 247
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ +K+DIADVV
Sbjct: 248 KIAPDLTAQDKQDIADVV 265
>gi|288959317|ref|YP_003449658.1| dihydroorotate oxidase [Azospirillum sp. B510]
gi|288911625|dbj|BAI73114.1| dihydroorotate oxidase [Azospirillum sp. B510]
Length = 357
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 154/217 (70%), Gaps = 2/217 (0%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + KD AD D V G + +A Y VVNVSSPNT LR LQ +D L+ LL+ V+E
Sbjct: 143 NLGKNKDTADAADDYVIGARRLAPLADYLVVNVSSPNTPGLRALQGRDPLRALLERVLEA 202
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R + PP+L+KIAPDL++++K DIA V L+S +DGLIVSNTT+ R + + A +
Sbjct: 203 RASCGLTRDPPLLLKIAPDLTVEDKSDIAAVALESG--IDGLIVSNTTIARPDIIPAALR 260
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL ST ++ E+Y LT GKLPI+GVGGV +G DA+ KI+AGASLVQ+Y++
Sbjct: 261 GEAGGLSGAPLFEPSTSVLREIYALTGGKLPIVGVGGVATGADAYAKIRAGASLVQLYSA 320
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VY GP +V RI+ EL ELL+++G+ SV++AVGA H+
Sbjct: 321 MVYAGPAVVHRIRRELAELLRRDGFRSVAEAVGADHR 357
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++G + +A Y VVNVSSPNT LR LQ +D L+ LL+ V+E R L PP+L+
Sbjct: 157 YVIGARRLAPLADYLVVNVSSPNTPGLRALQGRDPLRALLERVLEARASCGLTRDPPLLL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL++++K DIA V L+S
Sbjct: 217 KIAPDLTVEDKSDIAAVALES 237
>gi|110665638|gb|ABG81465.1| dihydroorotate dehydrogenase precursor [Bos taurus]
Length = 393
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 165/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ +T+ +L LP ++L + K D D +G+ G +A Y
Sbjct: 154 VEHRLRARQQTQARLTEDGLPL-------GINLGKNKTSVDAASDYAEGVRVLGPLADYL 206
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L V P +LVKIAPDL+ +K+DIA
Sbjct: 207 VVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIAPDLTAQDKEDIA 266
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+N+TV R L + E GGLSG+PLR+ ST+ I EMY LT+G+
Sbjct: 267 SVV--RELGIDGLIVTNSTVSRPASLQGALRSEPGGLSGKPLRDLSTQTIREMYALTQGR 324
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PI+GVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V +K ELE LL+++G+ V+
Sbjct: 325 VPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELEALLKEQGFARVT 384
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 385 DAIGADHR 392
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L + P +LVKIA
Sbjct: 195 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIA 254
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 255 PDLTAQDKEDIASVV 269
>gi|444722353|gb|ELW63051.1| Dihydroorotate dehydrogenase (quinone), mitochondrial [Tupaia
chinensis]
Length = 781
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/227 (52%), Positives = 156/227 (68%), Gaps = 11/227 (4%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ G +A Y VVNVSSPNTA LR LQ K L+HLL V++
Sbjct: 211 INLGKNKTSVDAAADYVEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKATLRHLLTKVLQ 270
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + P +LVKIAPDL+ +K+DIA VV + VDGLIV+NTTV R L
Sbjct: 271 ERDALKGEHRPAVLVKIAPDLTAQDKEDIASVV--RELGVDGLIVTNTTVSRPAGLQGAL 328
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGK---------LPIIGVGGVFSGKDAFEKIKA 280
+ E GGLSG+PLR+ ST+ I EMY LT+GK +PIIGVGGV SG+DA EKI+A
Sbjct: 329 RSEMGGLSGKPLRDLSTQTIREMYALTQGKAGVSVFSFVIPIIGVGGVSSGQDALEKIQA 388
Query: 281 GASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
GASLVQ+YT+ YHGPP+V R+K ELE LL+++G++ V+ AVG H+
Sbjct: 389 GASLVQLYTALTYHGPPVVGRVKRELEALLKEQGFSRVTDAVGIDHR 435
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G +A Y VVNVSSPNTA LR LQ K L+HLL V++ R+ L + P +LV
Sbjct: 226 YVEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKATLRHLLTKVLQERDALKGEHRPAVLV 285
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +K+DIA VV + V G++
Sbjct: 286 KIAPDLTAQDKEDIASVVRELGVDGLI 312
>gi|195395969|ref|XP_002056606.1| GJ11037 [Drosophila virilis]
gi|194143315|gb|EDW59718.1| GJ11037 [Drosophila virilis]
Length = 409
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 143/217 (65%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L +D + D VKG+ FG VA Y VVNVSSPNT LR +Q+K +L LL+ V
Sbjct: 185 VNLGRNRDTLTPINDYVKGVHTFGPVADYLVVNVSSPNTKGLRNMQSKKELTELLEAVNI 244
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R QL PIL+K++PDL E DI V+ KC+VDGLIVSNTTV R D
Sbjct: 245 ARGQLKTNQKVPILLKLSPDLETGELNDIVAVINQKKCRVDGLIVSNTTVARDNISDPAL 304
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSGEPLR +ST LI++MY LTKG LPIIGVGGV SG+ AFEKI+AGAS VQIYT
Sbjct: 305 ASEAGGLSGEPLRERSTRLIAQMYSLTKGSLPIIGVGGVASGQHAFEKIEAGASFVQIYT 364
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ +Y GP LV RIK EL + + GY V AVG+ +
Sbjct: 365 ALIYEGPELVERIKGELSLRISELGYACVKDAVGSNY 401
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y VVNVSSPNT LR +Q+K +L LL+ V R QL PIL+
Sbjct: 200 YVKGVHTFGPVADYLVVNVSSPNTKGLRNMQSKKELTELLEAVNIARGQLKTNQKVPILL 259
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDL E DI V+
Sbjct: 260 KLSPDLETGELNDIVAVI 277
>gi|374292959|ref|YP_005039994.1| dihydro-orotate oxidase [Azospirillum lipoferum 4B]
gi|357424898|emb|CBS87778.1| dihydro-orotate oxidase [Azospirillum lipoferum 4B]
Length = 357
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 154/214 (71%), Gaps = 2/214 (0%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + KD AD D V G+ + +A Y VVNVSSPNT LR LQ +D L+ LL+ V+E
Sbjct: 143 NLGKNKDTADAADDYVIGVRRLAPLADYLVVNVSSPNTPGLRALQGRDPLRALLERVLEA 202
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R + PP+L+KIAPDL++++K DIA V L+S +DGLIVSNTT+ R + + A +
Sbjct: 203 RAACGLTRNPPLLLKIAPDLTVEDKSDIAAVALESG--IDGLIVSNTTIARPDGIPAAMR 260
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL ST ++ E+Y LT GKLPI+GVGGV +G+DA+ KI+AGASLVQ+Y++
Sbjct: 261 SEAGGLSGRPLFEPSTSVLREIYALTGGKLPIVGVGGVATGEDAYAKIRAGASLVQLYSA 320
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VY GP +V RI+ EL ELL+++G+ SV++AVGA
Sbjct: 321 MVYAGPAVVHRIRRELAELLRRDGFRSVAEAVGA 354
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 57/81 (70%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++G+ + +A Y VVNVSSPNT LR LQ +D L+ LL+ V+E R L PP+L+
Sbjct: 157 YVIGVRRLAPLADYLVVNVSSPNTPGLRALQGRDPLRALLERVLEARAACGLTRNPPLLL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL++++K DIA V L+S
Sbjct: 217 KIAPDLTVEDKSDIAAVALES 237
>gi|380024704|ref|XP_003696132.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Apis florea]
Length = 392
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 156/214 (72%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D + GI KF DVA YFV+N+SSPNT LR LQ K+ L++LL V +
Sbjct: 175 VNLGKNKTSEDATQDYIDGIKKFSDVADYFVINISSPNTPGLRALQRKEDLENLLIKVNK 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +++ P+L+K+APDLS EK+DIA+V+L+ K KVDGLI+ NTT+ R L +
Sbjct: 235 FRQ--SIQSNQPLLLKLAPDLSDSEKQDIANVILEEKSKVDGLILCNTTITRNN-LSSPL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PL + ST +IS+MYK T+G +PIIGVGG+FSG DA+ KIKAGASLVQIYT
Sbjct: 292 KSEIGGLSGAPLTDMSTAMISDMYKRTRGTIPIIGVGGIFSGADAYNKIKAGASLVQIYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SF++ GPP+V +IK EL ++L+++G S+ A+G
Sbjct: 352 SFIFMGPPVVGKIKRELNDMLKQDGLISIKDAIG 385
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI 102
Q ++ GI KF DVA YFV+N+SSPNT LR LQ K+ L++LL V + R +++ P+
Sbjct: 188 QDYIDGIKKFSDVADYFVINISSPNTPGLRALQRKEDLENLLIKVNKFRQ--SIQSNQPL 245
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
L+K+APDLS EK+DIA+V+L+
Sbjct: 246 LLKLAPDLSDSEKQDIANVILE 267
>gi|158258018|dbj|BAF84982.1| unnamed protein product [Homo sapiens]
Length = 395
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|45006951|ref|NP_001352.2| dihydroorotate dehydrogenase (quinone), mitochondrial [Homo
sapiens]
gi|56405372|sp|Q02127.3|PYRD_HUMAN RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|357380747|pdb|3U2O|A Chain A, Dihydroorotate Dehydrogenase (Dhodh) Crystal Structure In
Complex With Small Molecule Inhibitor
gi|40850940|gb|AAH65245.1| Dihydroorotate dehydrogenase [Homo sapiens]
Length = 395
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|426382835|ref|XP_004058006.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Gorilla gorilla gorilla]
Length = 395
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLQRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPIVGKVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|281351476|gb|EFB27060.1| hypothetical protein PANDA_009832 [Ailuropoda melanoleuca]
Length = 398
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 165/258 (63%), Gaps = 20/258 (7%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ E + +L + LP ++L + K D D +G+ G +A Y
Sbjct: 150 VEHRLRARREKQARLTEEGLPL-------GINLGKNKTSVDAAADYAEGVRVLGPLADYL 202
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 203 VVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQGARKPAVLVKIAPDLTAQDKEDIA 262
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLI++NTTV R L + E GGLSG+PLR+ ST+ I EMY LTKGK
Sbjct: 263 SVV--RELGIDGLIITNTTVSRPASLQGALRSEIGGLSGKPLRDLSTQTIREMYALTKGK 320
Query: 260 -----------LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V R+K ELE
Sbjct: 321 NSVPVSSDLRGVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGRVKRELEA 380
Query: 309 LLQKEGYNSVSQAVGAAH 326
LL+++G+ ++ A+GA H
Sbjct: 381 LLKEQGFTRITDAIGADH 398
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LV
Sbjct: 188 YAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQGARKPAVLV 247
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ +K+DIA VV
Sbjct: 248 KIAPDLTAQDKEDIASVV 265
>gi|195146274|ref|XP_002014112.1| GL24502 [Drosophila persimilis]
gi|194103055|gb|EDW25098.1| GL24502 [Drosophila persimilis]
Length = 363
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 154/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L ++ V D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L LL+ V E
Sbjct: 133 VNLGRNRNTMTPVADYVQGVRMFGPVADYLVINVSSPNTKGLRDMQSKEKLTELLEQVNE 192
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++L PIL+K++PDL + + DI DV+ +K +VDGLIV+NTTV R DA++
Sbjct: 193 ARSRLESNRNVPILLKLSPDLEISDMSDIVDVIKRNKSRVDGLIVANTTVSRDNLHDAKW 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSGEPLR +STE+I++MY+LT GK+PIIGVGGV SG DA++K +AGAS VQIYT
Sbjct: 253 TAEAGGLSGEPLRARSTEMIAQMYQLTNGKVPIIGVGGVSSGYDAYQKFEAGASYVQIYT 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV +IK EL +L+ + G++++ VG K
Sbjct: 313 ALVYEGPYLVEQIKDELSKLITQRGHSNIQSVVGTNSK 350
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L LL+ V E R++L PIL+
Sbjct: 148 YVQGVRMFGPVADYLVINVSSPNTKGLRDMQSKEKLTELLEQVNEARSRLESNRNVPILL 207
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDL + + DI DV+
Sbjct: 208 KLSPDLEISDMSDIVDVI 225
>gi|555594|gb|AAA50163.1| dihydroorotate dehydrogenase, partial [Homo sapiens]
Length = 396
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 180 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 239
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 240 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 297
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 298 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 357
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 358 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 395
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 198 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 257
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 258 PDLTSQDKEDIASVV 272
>gi|348681385|gb|EGZ21201.1| hypothetical protein PHYSODRAFT_557375 [Phytophthora sojae]
Length = 428
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 160/220 (72%), Gaps = 4/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ G A Y VVNVSSPNT LR LQ K QL++LL V++
Sbjct: 211 VNLGKNKLTEDAASDYVRGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQNLLVRVLK 270
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A K P+LVKIAPDL+ D+K+DIADV L+ K+DGL+VSNTT+ R + L
Sbjct: 271 ARDEVAAKEERRIPLLVKIAPDLTEDDKQDIADVALE--LKLDGLVVSNTTLSRPDTLKG 328
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K ETGGLSG P+R+ ST+++ +MYKLTKG++P+IGVGGV +G+DA++KI+AGASLVQ+
Sbjct: 329 EAKGETGGLSGLPVRDLSTKVLGDMYKLTKGQIPLIGVGGVSTGQDAYDKIRAGASLVQM 388
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y+ +Y P V R K EL LL+++GY SV+ AVGAAHK
Sbjct: 389 YSCLIYESPLAVPRAKKELVALLRRDGYESVADAVGAAHK 428
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ G+ G A Y VVNVSSPNT LR LQ K QL++LL V++ R+++A K P+
Sbjct: 226 YVRGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQNLLVRVLKARDEVAAKEERRIPL 285
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
LVKIAPDL+ D+K+DIADV L+
Sbjct: 286 LVKIAPDLTEDDKQDIADVALE 307
>gi|328783311|ref|XP_003250270.1| PREDICTED: dihydroorotate dehydrogenase, mitochondrial-like [Apis
mellifera]
Length = 392
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 154/214 (71%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D + GI KF DVA YFV+NVSSPNT LR LQ K L+ LL + +
Sbjct: 175 VNLGKNKTSEDAAQDYIDGIKKFSDVADYFVINVSSPNTPGLRTLQRKQDLEDLLIKINK 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +++ P+L+K+APDLS EK+DIA V+L+ K KVDGLI+ NTT+ R L +
Sbjct: 235 IRR--SIQSNQPLLLKLAPDLSDSEKQDIASVILEEKSKVDGLILCNTTITRNN-LSSPL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG PL + ST +IS+MYK T+G +PIIGVGG+FSG DA+ KIKAGASL+QIYT
Sbjct: 292 KSETGGLSGAPLTDMSTAMISDMYKRTRGTIPIIGVGGIFSGADAYNKIKAGASLLQIYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
SF++ GPP++ +IK EL ++L+++G S+ A+G
Sbjct: 352 SFIFMGPPVIGKIKRELNDMLKQDGLKSIKDAIG 385
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI 102
Q ++ GI KF DVA YFV+NVSSPNT LR LQ K L+ LL + + R +++ P+
Sbjct: 188 QDYIDGIKKFSDVADYFVINVSSPNTPGLRTLQRKQDLEDLLIKINKIRR--SIQSNQPL 245
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
L+K+APDLS EK+DIA V+L+
Sbjct: 246 LLKLAPDLSDSEKQDIASVILE 267
>gi|10835815|pdb|1D3G|A Chain A, Human Dihydroorotate Dehydrogenase Complexed With
Brequinar Analog
gi|10835816|pdb|1D3H|A Chain A, Human Dihydroorotate Dehydrogenase Complexed With
Antiproliferative Agent A771726
gi|114793576|pdb|2BXV|A Chain A, Dual Binding Mode Of A Novel Series Of Dhodh Inhibitors
gi|188595819|pdb|2PRH|A Chain A, The Structures Of Apo- And Inhibitor Bound Human
Dihydroorotate Dehydrogenase Reveal Conformational
Flexibility Within The Inhibitor Binding Site
gi|188595820|pdb|2PRL|A Chain A, The Structures Of Apo- And Inhibitor Bound Human
Dihydroorotate Dehydrogenase Reveal Conformational
Flexibility Within The Inhibitor Binding Site
gi|188595821|pdb|2PRM|A Chain A, The Structures Of Apo- And Inhibitor Bound Human
Dihydroorotate Dehydrogenase Reveal Conformational
Flexibility Within The Inhibitor Binding Site
gi|239781842|pdb|3F1Q|A Chain A, Human Dihydroorotate Dehydrogenase In Complex With A
Leflunomide Derivative Inhibitor 1
gi|239781858|pdb|3FJ6|A Chain A, Human Dihydroorotate Dehydrogenase In Complex With A
Leflunomide Derivative Inhibitor 2
gi|239781859|pdb|3FJL|A Chain A, Human Dihydroorotate Dehydrogenase In Complex With A
Leflunomide Derivative Inhibitor 3
gi|239781882|pdb|3G0U|A Chain A, Human Dihydroorotate Dehydrogenase In Complex With A
Leflunomide Derivative Inhibitor 4
gi|239781883|pdb|3G0X|A Chain A, Human Dihydroorotate Dehydrogenase In Complex With A
Leflunomide Derivative Inhibitor 5
gi|392935572|pdb|3ZWS|A Chain A, Structure Of Human Dihydroorotate Dehydrogenase With A
Bound Inhibitor
gi|392935573|pdb|3ZWT|A Chain A, Structure Of Human Dihydroorotate Dehydrogenase With A
Bound Inhibitor
Length = 367
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 151 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 210
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 211 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 268
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 269 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 328
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 329 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 366
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 169 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 228
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 229 PDLTSQDKEDIASVV 243
>gi|397518779|ref|XP_003829558.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Pan paniscus]
Length = 395
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|304445652|pdb|2WV8|A Chain A, Complex Of Human Dihydroorotate Dehydrogenase With The
Inhibitor 221290
Length = 365
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 149 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 208
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 209 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 266
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 267 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 326
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 327 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 364
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 167 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 226
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 227 PDLTSQDKEDIASVV 241
>gi|78101521|pdb|2B0M|A Chain A, Human Dihydroorotate Dehydrogenase Bound To A Novel
Inhibitor
Length = 393
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 177 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 236
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 237 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 295 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 355 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 392
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 195 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 254
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 255 PDLTSQDKEDIASVV 269
>gi|114663597|ref|XP_001171601.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
isoform 2 [Pan troglodytes]
gi|410220062|gb|JAA07250.1| dihydroorotate dehydrogenase [Pan troglodytes]
gi|410303344|gb|JAA30272.1| dihydroorotate dehydrogenase [Pan troglodytes]
Length = 395
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFGRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|126030439|pdb|2FPT|A Chain A, Dual Binding Mode Of A Novel Series Of Dhodh Inhibitors
gi|126030440|pdb|2FPV|A Chain A, Dual Binding Mode Of A Novel Series Of Dhodh Inhibitors
gi|126030441|pdb|2FPY|A Chain A, Dual Binding Mode Of A Novel Series Of Dhodh Inhibitors
gi|126030447|pdb|2FQI|A Chain A, Dual Binding Modes Of A Novel Series Of Dhodh Inhibitors
Length = 395
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 394
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|290560381|pdb|3KVJ|A Chain A, Crystal Structure Of Human Dihydroorotate Dehydrogenase
(Dhodh) With Amino-Benzoic Acid Inhibitor 105 At 1.94a
Resolution
gi|290560382|pdb|3KVK|A Chain A, Crystal Structure Of Human Dihydroorotate Dehydrogenase
(Dhodh) With Amino-Benzoic Acid Inhibitor 641 At 2.05a
Resolution
gi|290560383|pdb|3KVL|A Chain A, Crystal Structure Of Human Dihydroorotate Dehydrogenase
(Dhodh) With Amino-Benzoic Acid Inhibitor 715 At 1.85a
Resolution
gi|290560384|pdb|3KVM|A Chain A, Crystal Structure Of Human Dihydroorotate Dehydrogenase
(Dhodh) With Amino-Benzoic Acid Inhibitor 951 At 2.00a
Resolution
Length = 390
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 174 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 233
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 234 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 292 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 352 ALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 389
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 192 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 251
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 252 PDLTSQDKEDIASVV 266
>gi|390178436|ref|XP_001359026.3| GA22001 [Drosophila pseudoobscura pseudoobscura]
gi|388859447|gb|EAL28169.3| GA22001 [Drosophila pseudoobscura pseudoobscura]
Length = 387
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 153/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L ++ V D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L LL+ V E
Sbjct: 165 VNLGRNRNTMTPVADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLTELLEQVNE 224
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++L PIL+K++PDL + + DI DV+ K +VDGLIV+NTTV R DA++
Sbjct: 225 ARSRLESNRNVPILLKLSPDLEISDMSDIVDVIKRKKSRVDGLIVANTTVSRDNLHDAKW 284
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSGEPLR +STE+I++MY+LT GK+PIIGVGGV SG DA++K +AGAS VQIYT
Sbjct: 285 TAEAGGLSGEPLRARSTEMIAQMYQLTNGKVPIIGVGGVSSGYDAYQKFEAGASYVQIYT 344
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV +IK EL +L+ + G++++ VG K
Sbjct: 345 ALVYEGPYLVEQIKDELSKLITQRGHSNIQSVVGTNSK 382
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L LL+ V E R++L PIL+
Sbjct: 180 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLTELLEQVNEARSRLESNRNVPILL 239
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDL + + DI DV+
Sbjct: 240 KLSPDLEISDMSDIVDVI 257
>gi|410329859|gb|JAA33876.1| dihydroorotate dehydrogenase [Pan troglodytes]
Length = 395
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFGRVTDAIGADHQ 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|157112038|ref|XP_001657386.1| dihydroorotate dehydrogenase [Aedes aegypti]
gi|108878217|gb|EAT42442.1| AAEL006033-PA [Aedes aegypti]
Length = 395
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 158/218 (72%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K D D ++GI KF +A Y V+N+SSPNT LR +Q K L+ LL V++
Sbjct: 175 VNLGRNKHSPDAYNDYIQGIKKFSCLADYLVINISSPNTPGLRAMQNKTTLQVLLSEVLK 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + PILVK APDL+ ++ ++I VV+ + VDG+IVSNTT+DR L +
Sbjct: 235 ARSALPPEEQRPILVKFAPDLADEDVQEIVTVVMQKEFAVDGVIVSNTTIDRPASLKSIN 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ GGLSG PL +ST+LI+++YK T+GK+PIIGVGG+FSG+DA++KI+AGAS+VQ+YT
Sbjct: 295 AGQIGGLSGAPLCQRSTQLIAKVYKWTEGKIPIIGVGGIFSGQDAYDKIQAGASVVQLYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+F++HGPP+VTR+K EL+ +L+K GY SV +AVG ++
Sbjct: 355 AFIFHGPPVVTRVKQELDAILRKNGYKSVEEAVGKGYE 392
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI KF +A Y V+N+SSPNT LR +Q K L+ LL V++ R+ L + PILV
Sbjct: 190 YIQGIKKFSCLADYLVINISSPNTPGLRAMQNKTTLQVLLSEVLKARSALPPEEQRPILV 249
Query: 105 KIAPDLSLDEKKDIADVVLD---SVKGIL 130
K APDL+ ++ ++I VV+ +V G++
Sbjct: 250 KFAPDLADEDVQEIVTVVMQKEFAVDGVI 278
>gi|195330658|ref|XP_002032020.1| GM26331 [Drosophila sechellia]
gi|194120963|gb|EDW43006.1| GM26331 [Drosophila sechellia]
Length = 405
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 154/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K + D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +
Sbjct: 183 VNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVND 242
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T++ L PIL+K++PDLSLD+ KDI V+ K +VDGLIVSNTTV R + +
Sbjct: 243 TKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENLENKKL 302
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EETGGLSG PL+ +STE+I++MY+LT GK+PIIGVGGV SG DA+EKI+AGAS VQIYT
Sbjct: 303 AEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYT 362
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV IK+EL L+ + G+ +V+ VG K
Sbjct: 363 ALVYEGPALVEDIKAELSALITRLGHTNVADVVGTNSK 400
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +T++ L PIL+
Sbjct: 198 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILL 257
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSLD+ KDI V+
Sbjct: 258 KLSPDLSLDDMKDIVWVI 275
>gi|341877430|gb|EGT33365.1| hypothetical protein CAEBREN_29879 [Caenorhabditis brenneri]
Length = 410
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 153/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D LD G+ F Y V+NVSSPNT LR +Q K L+ LL V E
Sbjct: 190 VNLGKNKLTEDAKLDYEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVKE 249
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ ++ P + +KIAPDL E KDIA VV++ K VDG+IVSNTT+ R +YL +
Sbjct: 250 ALDMHKLEKRPQVFLKIAPDLIETEMKDIAQVVINKKFGVDGIIVSNTTIARPDYLKSEN 309
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG P+R STE + +MY+LT G++PIIG GG+FSG+DA+EKI+AGASLVQ+Y+
Sbjct: 310 KSETGGLSGAPVREISTECVRKMYRLTNGQIPIIGCGGIFSGEDAYEKIRAGASLVQLYS 369
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+FVY G P++ +IK EL ELL+++G+N +S+AVGA H+
Sbjct: 370 AFVYEGFPVIGKIKRELAELLKRDGFNHISEAVGADHR 407
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ +G+ F Y V+NVSSPNT LR +Q K L+ LL V E + L+ P + +
Sbjct: 205 YEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVKEALDMHKLEKRPQVFL 264
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGI 129
KIAPDL E KDIA VV++ G+
Sbjct: 265 KIAPDLIETEMKDIAQVVINKKFGV 289
>gi|332227660|ref|XP_003263009.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Nomascus leucogenys]
Length = 395
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 153/218 (70%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDATEDYAEGVRVLGPLADYLVVNVSSPNTAGLRNLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRGVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+PLR+ ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSEIGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V +IK ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKIKRELEALLKEQGFGRVTDAIGADHR 394
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRNLQGKAELRRLLTKVLQERDGLRGVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|308497887|ref|XP_003111130.1| CRE-DHOD-1 protein [Caenorhabditis remanei]
gi|308240678|gb|EFO84630.1| CRE-DHOD-1 protein [Caenorhabditis remanei]
Length = 409
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 151/218 (69%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D LD G+ F Y V+NVSSPNT LR +Q K L+ LL V +
Sbjct: 190 VNLGKNKMTEDAKLDYEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKGDLEKLLAYVRD 249
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
N ++ P + +KIAPDL E KDIA VV + K VDG+IVSNTT+ R +YL +
Sbjct: 250 ALNMHKLEKRPQVFLKIAPDLIESEMKDIAQVVTNKKYGVDGIIVSNTTIARPDYLRSEN 309
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG P+R STE + +MYKLT G++PIIG GGVFSG+DA+EKI+AGASLVQ+Y+
Sbjct: 310 KAETGGLSGAPVREISTECVRKMYKLTNGQVPIIGCGGVFSGEDAYEKIRAGASLVQLYS 369
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+FVY G P++ +IK EL ELL+++GY +S+AVGA H+
Sbjct: 370 AFVYEGFPVIGKIKRELAELLKRDGYTHISEAVGADHR 407
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ +G+ F Y V+NVSSPNT LR +Q K L+ LL V + N L+ P + +
Sbjct: 205 YEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKGDLEKLLAYVRDALNMHKLEKRPQVFL 264
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGI 129
KIAPDL E KDIA VV + G+
Sbjct: 265 KIAPDLIESEMKDIAQVVTNKKYGV 289
>gi|427779381|gb|JAA55142.1| Putative dihydroorotate dehydrogenase [Rhipicephalus pulchellus]
Length = 421
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 159/252 (63%), Gaps = 36/252 (14%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L KD D D V G+ +F D+A Y VVNVSSPNT LR LQ + LK LL V+E
Sbjct: 171 VNLGRNKDSMDAQADYVAGVRRFSDLADYLVVNVSSPNTPGLRTLQRRHHLKDLLLKVLE 230
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSK----------------------- 206
R+ A + P+LVKIAPDL+ +EK DIA VV ++K
Sbjct: 231 ARDSQARRL--PVLVKIAPDLTDEEKADIAAVVTETKVDGLVVCNTTISRPSSLRSEYRX 288
Query: 207 -----------CKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
KVDGL+V NTTV R L + Y+ E GGLSG PLR+ ST+ IS++Y+L
Sbjct: 289 EKADIAAVVTETKVDGLVVCNTTVSRPSSLRSEYRSEPGGLSGRPLRDLSTQTISDLYRL 348
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TKG +PI+GVGGVFSG+DA+ KI+AGAS +Q+YT+ +Y+GPP+V +K++L +LL+K+GY
Sbjct: 349 TKGSIPIVGVGGVFSGEDAYAKIRAGASAIQLYTALIYNGPPVVRTVKAQLADLLRKDGY 408
Query: 316 NSVSQAVGAAHK 327
+ AVGA H+
Sbjct: 409 ARIQDAVGADHR 420
>gi|195499154|ref|XP_002096828.1| GE24838 [Drosophila yakuba]
gi|194182929|gb|EDW96540.1| GE24838 [Drosophila yakuba]
Length = 406
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K + D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +
Sbjct: 183 VNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVND 242
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T+N L PIL+K++PDLSLD+ +DI V+ K +VDGLIVSNTTV R + +
Sbjct: 243 TKNSLDKNKNVPILLKLSPDLSLDDMRDIVWVIKRKKSRVDGLIVSNTTVSRENIGNNKL 302
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EETGGLSG PL+ +STE+I++MY+LT GK+PIIGVGGV SG DA+EKI+AGAS VQ+YT
Sbjct: 303 AEETGGLSGLPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQLYT 362
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV IK+EL L+ + G+ +V+ VG K
Sbjct: 363 ALVYEGPALVDDIKAELSALITRLGHTNVADVVGTNSK 400
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +T+N L PIL+
Sbjct: 198 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKNSLDKNKNVPILL 257
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSLD+ +DI V+
Sbjct: 258 KLSPDLSLDDMRDIVWVI 275
>gi|341879454|gb|EGT35389.1| hypothetical protein CAEBREN_13926 [Caenorhabditis brenneri]
Length = 410
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 152/218 (69%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D LD G+ F Y V+NVSSPNT LR +Q K L+ LL V E
Sbjct: 190 VNLGKNKLTEDAKLDYEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVKE 249
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ ++ P + +KIAPDL E KDIA VV + K VDG+IVSNTT+ R +YL +
Sbjct: 250 ALDMHKLEKRPQVFLKIAPDLIETEMKDIAQVVTNKKFGVDGIIVSNTTIARPDYLKSEN 309
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG P+R STE + +MY+LT G++PIIG GGVFSG+DA+EKI+AGASLVQ+Y+
Sbjct: 310 KSETGGLSGAPVREISTECVRKMYRLTNGQIPIIGCGGVFSGEDAYEKIRAGASLVQLYS 369
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+FVY G P++ +IK EL ELL+++G+N +S+AVGA H+
Sbjct: 370 AFVYEGFPVIGKIKRELAELLKRDGFNHISEAVGADHR 407
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ +G+ F Y V+NVSSPNT LR +Q K L+ LL V E + L+ P + +
Sbjct: 205 YEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVKEALDMHKLEKRPQVFL 264
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGI 129
KIAPDL E KDIA VV + G+
Sbjct: 265 KIAPDLIETEMKDIAQVVTNKKFGV 289
>gi|355710352|gb|EHH31816.1| hypothetical protein EGK_12959 [Macaca mulatta]
gi|355756924|gb|EHH60532.1| hypothetical protein EGM_11913 [Macaca fascicularis]
Length = 399
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 153/222 (68%), Gaps = 6/222 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLQGAHRPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGK----LPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG+PLR+ ST+ I EMY LT+GK PIIGVGGV SG+DA EKI+AGASLV
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGKASGIFPIIGVGGVSSGQDALEKIRAGASLV 356
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Q+YT+ + GPP+V R+K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 QLYTALTFWGPPVVGRVKRELEALLKEQGFGRVTDAIGADHR 398
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLQGAHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|17137316|ref|NP_477224.1| dihydroorotate dehydrogenase, isoform A [Drosophila melanogaster]
gi|281361352|ref|NP_599138.3| dihydroorotate dehydrogenase, isoform D [Drosophila melanogaster]
gi|76803849|sp|P32748.2|PYRD_DROME RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; Short=Dihydroorotate
oxidase; Flags: Precursor
gi|7299059|gb|AAF54260.1| dihydroorotate dehydrogenase, isoform A [Drosophila melanogaster]
gi|33589340|gb|AAQ22437.1| RE68028p [Drosophila melanogaster]
gi|220950570|gb|ACL87828.1| Dhod-PA [synthetic construct]
gi|220959410|gb|ACL92248.1| Dhod-PA [synthetic construct]
gi|272476870|gb|AAN13391.2| dihydroorotate dehydrogenase, isoform D [Drosophila melanogaster]
Length = 405
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 153/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K + D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +
Sbjct: 183 VNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVND 242
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T++ L PIL+K++PDLSLD+ KDI V+ K +VDGLIVSNTTV R +
Sbjct: 243 TKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENIEKNKL 302
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EETGGLSG PL+ +STE+I++MY+LT GK+PIIGVGGV SG DA+EKI+AGAS VQIYT
Sbjct: 303 AEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYT 362
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV IK+EL L+ + G+ +V+ VG K
Sbjct: 363 ALVYEGPALVEDIKAELSALITRLGHTNVADVVGTNSK 400
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +T++ L PIL+
Sbjct: 198 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILL 257
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSLD+ KDI V+
Sbjct: 258 KLSPDLSLDDMKDIVWVI 275
>gi|322799041|gb|EFZ20496.1| hypothetical protein SINV_00356 [Solenopsis invicta]
Length = 391
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 155/219 (70%), Gaps = 3/219 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ D + D + GI +F DVA YFV+NVSSPNT LR LQ K L+ LL V
Sbjct: 175 VNLGRNKETKDAIQDYIDGIKRFMDVADYFVINVSSPNTPGLRSLQNKKNLQDLLTKVNA 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + + P+ +K+APDL E++D+ADVVL+ K KVDGL++ NTT+ R +
Sbjct: 235 ARELVGSRQ--PLFLKLAPDLLDSERQDVADVVLNQKSKVDGLVLCNTTIMRPNLTNPN- 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K+E+GGLSG PL + ST +IS+MY+ T G +PIIGVGGVFSG DA+ KI+AGA+L+Q+YT
Sbjct: 292 KQESGGLSGAPLTDISTSMISDMYRRTHGSIPIIGVGGVFSGSDAYAKIRAGATLIQLYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
S++Y+GPP+V +IK EL E+L+ G++SV+ A+G KS
Sbjct: 352 SYIYNGPPIVGKIKRELCEILETNGFSSVTDAIGKDAKS 390
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
+Q ++ GI +F DVA YFV+NVSSPNT LR LQ K L+ LL V R + + P
Sbjct: 187 IQDYIDGIKRFMDVADYFVINVSSPNTPGLRSLQNKKNLQDLLTKVNAARELVGSR--QP 244
Query: 102 ILVKIAPDLSLDEKKDIADVVLD 124
+ +K+APDL E++D+ADVVL+
Sbjct: 245 LFLKLAPDLLDSERQDVADVVLN 267
>gi|195572511|ref|XP_002104239.1| GD20856 [Drosophila simulans]
gi|194200166|gb|EDX13742.1| GD20856 [Drosophila simulans]
Length = 405
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 154/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K + D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +
Sbjct: 183 VNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVND 242
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T++ L PIL+K++PDLSLD+ KDI V+ K +VDGLIVSNTTV R + +
Sbjct: 243 TKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENLENKKL 302
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ETGGLSG PL+ +STE+I++MY+LT GK+PIIGVGGV SG DA+EKI+AGAS VQIYT
Sbjct: 303 ADETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYT 362
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV IK+EL L+ + G+ +V+ VG K
Sbjct: 363 ALVYEGPALVEDIKAELSALITRLGHTNVADVVGTNSK 400
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +T++ L PIL+
Sbjct: 198 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILL 257
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSLD+ KDI V+
Sbjct: 258 KLSPDLSLDDMKDIVWVI 275
>gi|33589597|gb|AAQ22565.1| GH24729p [Drosophila melanogaster]
Length = 355
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 153/218 (70%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K + D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +
Sbjct: 133 VNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVND 192
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T++ L PIL+K++PDLSLD+ KDI V+ K +VDGLIVSNTTV R +
Sbjct: 193 TKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENIEKNKL 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EETGGLSG PL+ +STE+I++MY+LT GK+PIIGVGGV SG DA+EKI+AGAS VQIYT
Sbjct: 253 AEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYT 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV IK+EL L+ + G+ +V+ VG K
Sbjct: 313 ALVYEGPALVEDIKAELSALITRLGHTNVADVVGTNSK 350
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +T++ L PIL+
Sbjct: 148 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILL 207
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSLD+ KDI V+
Sbjct: 208 KLSPDLSLDDMKDIVWVI 225
>gi|119579605|gb|EAW59201.1| dihydroorotate dehydrogenase, isoform CRA_d [Homo sapiens]
Length = 397
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 154/220 (70%), Gaps = 4/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGK--LPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ ETGGLSG+PLR+ ST+ I EMY LT+GK LPIIGVGGV SG+DA EKI+AGASLVQ+
Sbjct: 297 RSETGGLSGKPLRDLSTQTIREMYALTQGKVSLPIIGVGGVSSGQDALEKIRAGASLVQL 356
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
YT+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 YTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|268565463|ref|XP_002639452.1| Hypothetical protein CBG04047 [Caenorhabditis briggsae]
Length = 409
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 151/218 (69%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D LD G+ F Y V+NVSSPNT LR +Q K L+ LL V E
Sbjct: 190 VNLGKNKLTEDAKLDYEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVKE 249
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ + ++ P I +KIAPDL E KDIA VV + K VDG+IVSNTT+ R +YL +
Sbjct: 250 SLDMHKLEKRPQIFLKIAPDLIDSEMKDIAHVVTNKKFGVDGIIVSNTTIARPDYLKSEN 309
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG P+R STE I +MYKLT G++PIIG GGVFSG+DA+EKI+AG SLVQ+Y+
Sbjct: 310 KAETGGLSGAPVREISTECIRKMYKLTNGQIPIIGCGGVFSGEDAYEKIRAGGSLVQLYS 369
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+FVY G P++ +IK EL ELL+++G+ VS+AVGA H+
Sbjct: 370 AFVYEGFPVIGKIKRELSELLKRDGFAHVSEAVGADHR 407
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ +G+ F Y V+NVSSPNT LR +Q K L+ LL V E+ + L+ P I +
Sbjct: 205 YEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVKESLDMHKLEKRPQIFL 264
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGI 129
KIAPDL E KDIA VV + G+
Sbjct: 265 KIAPDLIDSEMKDIAHVVTNKKFGV 289
>gi|440905389|gb|ELR55766.1| Dihydroorotate dehydrogenase, mitochondrial, partial [Bos grunniens
mutus]
Length = 391
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/251 (47%), Positives = 165/251 (65%), Gaps = 12/251 (4%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ +T+ +L LP ++L + K D D +G+ G +A Y
Sbjct: 149 VEHRLRARQQTQARLTEDGLPL-------GINLGKNKTSVDAASDYAEGVRVLGPLADYL 201
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L V P +L+KIAPDL+ +K+DIA
Sbjct: 202 VVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLLKIAPDLTAQDKEDIA 261
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+N+TV R L + E GGLSG+PLR+ ST+ I EMY LT+GK
Sbjct: 262 SVV--RELGIDGLIVTNSTVSRPASLQGALRSEPGGLSGKPLRDLSTQTIREMYALTQGK 319
Query: 260 ---LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+PI+GVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V +K ELE LL+++G+
Sbjct: 320 DSIVPIVGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGGVKRELEALLKEQGFA 379
Query: 317 SVSQAVGAAHK 327
V+ A+GA H+
Sbjct: 380 RVTDAIGADHR 390
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L + P +L+KIA
Sbjct: 190 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLLKIA 249
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 250 PDLTAQDKEDIASVV 264
>gi|290462287|gb|ADD24191.1| Dihydroorotate dehydrogenase, mitochondrial [Lepeophtheirus
salmonis]
Length = 398
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + K D V D V+G+ KF ++ Y V+NVSSP+T +LR LQ K L+ L+ +++
Sbjct: 182 NLGKNKTSEDAVADYVEGVKKFASLSDYLVINVSSPDTPDLRALQGKSSLEALISAILKA 241
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
RN++ K PIL+KIAPDL+ ++ DIA+V+L KC+VDGLI+SNTT+ R L + K
Sbjct: 242 RNEIQSKT--PILLKIAPDLTPEDMNDIAEVILSEKCRVDGLIISNTTISRPSSLKSSNK 299
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
ETGGLSG PL ST +I +M LTKG++PIIGVGG+ +G+DAFEKI+AGASLVQIY++
Sbjct: 300 SETGGLSGAPLMKLSTNVIRKMCILTKGQIPIIGVGGISTGQDAFEKIEAGASLVQIYSA 359
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VY GPP+V +I EL ++L+++ S+S+ +G
Sbjct: 360 IVYQGPPIVKKINRELADILREKNIKSISEVIG 392
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KF ++ Y V+NVSSP+T +LR LQ K L+ L+ +++ RN++ K PIL+
Sbjct: 196 YVEGVKKFASLSDYLVINVSSPDTPDLRALQGKSSLEALISAILKARNEIQSK--TPILL 253
Query: 105 KIAPDLSLDEKKDIADVVL 123
KIAPDL+ ++ DIA+V+L
Sbjct: 254 KIAPDLTPEDMNDIAEVIL 272
>gi|320163907|gb|EFW40806.1| dihydroorotate dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 402
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 154/229 (67%), Gaps = 13/229 (5%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+GI K G A Y VVN+SSPNT LR LQ K +L L+ V+
Sbjct: 171 VNLGKNKTTVDAADDYVQGINKLGKFADYIVVNISSPNTPGLRSLQGKQELGALIDRVLV 230
Query: 170 TRNQLAVKP---------LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
R++L + +PP+LVKIAPDL+ +K+DIA V++D K VDGLIVSNTT+
Sbjct: 231 ARDRLGLPSQASAAVRGRVPPLLVKIAPDLTPADKEDIASVLMDKK--VDGLIVSNTTIS 288
Query: 221 RYEYLD--ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
R L A +ETGGLSG PLR +TE + +MY LT+G+LPIIGVGGV +G DAFEKI
Sbjct: 289 RPATLKSPASLTQETGGLSGAPLRQLATETVRDMYTLTQGRLPIIGVGGVSTGDDAFEKI 348
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
AGASLVQ+Y+S VY GP +V +I+S L ELL + + SVS AVGA H+
Sbjct: 349 LAGASLVQLYSSIVYDGPGIVPKIQSRLAELLAENSFTSVSDAVGAEHR 397
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP------ 98
++ GI K G A Y VVN+SSPNT LR LQ K +L L+ V+ R++L L
Sbjct: 186 YVQGINKLGKFADYIVVNISSPNTPGLRSLQGKQELGALIDRVLVARDRLGLPSQASAAV 245
Query: 99 ---LPPILVKIAPDLSLDEKKDIADVVLD 124
+PP+LVKIAPDL+ +K+DIA V++D
Sbjct: 246 RGRVPPLLVKIAPDLTPADKEDIASVLMD 274
>gi|195111741|ref|XP_002000436.1| GI10232 [Drosophila mojavensis]
gi|193917030|gb|EDW15897.1| GI10232 [Drosophila mojavensis]
Length = 396
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 149/217 (68%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L +D + D VKG+ FG VA Y V+NVSSPNT LR++Q+K +L LL+ V
Sbjct: 175 VNLGRNRDTMTPIGDYVKGVRTFGPVADYLVINVSSPNTKGLREMQSKKELTELLEAVNA 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +L V PIL+K++PDL + DI V+ + KC+VDGLIVSNTT+ R D
Sbjct: 235 VRGKLKVNTNVPILLKLSPDLDHRQLIDIISVINNKKCRVDGLIVSNTTLSRDNINDISL 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSGEPLR +ST++I+++Y LTKG +PIIGVGGV SG DAFEKI+AGAS VQIYT
Sbjct: 295 ANEAGGLSGEPLRERSTKMIAQVYSLTKGSIPIIGVGGVASGNDAFEKIEAGASFVQIYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ VY GP +V RIKS+L + + G +V +AVG+ +
Sbjct: 355 ALVYEGPEVVERIKSDLSLRISELGLANVGRAVGSNY 391
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR++Q+K +L LL+ V R +L + PIL+
Sbjct: 190 YVKGVRTFGPVADYLVINVSSPNTKGLREMQSKKELTELLEAVNAVRGKLKVNTNVPILL 249
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDL + DI V+
Sbjct: 250 KLSPDLDHRQLIDIISVI 267
>gi|345329614|ref|XP_001505402.2| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Ornithorhynchus anatinus]
Length = 351
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L++LL V++
Sbjct: 152 INLGKNKSSQDAASDYAEGVRALGPLADYLVVNVSSPNTAGLRDLQGKAELRNLLTKVLK 211
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L VK P +LVKIAPDLS +KKDIA VV + +DGLIV+NTTV R L +
Sbjct: 212 ERDSLKVKCKPAVLVKIAPDLSAQDKKDIASVVRE--LGIDGLIVTNTTVSRPSGLQSAL 269
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+PLR +T+ +SEMY LT+G++PIIGVGG+ SG+DA EKI+AGASLVQIYT
Sbjct: 270 RSETGGLSGKPLRALATQTVSEMYSLTQGQVPIIGVGGISSGRDALEKIRAGASLVQIYT 329
Query: 290 SFVYHGPPLVTRIKSELEELLQ 311
+ Y GPP+V +K ELE LL+
Sbjct: 330 ALTYQGPPVVKAVKRELEALLK 351
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L++LL V++ R+ L +K P +LVKIA
Sbjct: 170 GVRALGPLADYLVVNVSSPNTAGLRDLQGKAELRNLLTKVLKERDSLKVKCKPAVLVKIA 229
Query: 108 PDLSLDEKKDIADVVLD 124
PDLS +KKDIA VV +
Sbjct: 230 PDLSAQDKKDIASVVRE 246
>gi|301121560|ref|XP_002908507.1| dihydroorotate dehydrogenase, mitochondrial precursor [Phytophthora
infestans T30-4]
gi|262103538|gb|EEY61590.1| dihydroorotate dehydrogenase, mitochondrial precursor [Phytophthora
infestans T30-4]
gi|399106016|gb|AFP19903.1| mitochondrial dihydroorotate dehydrogenase [Phytophthora infestans]
Length = 424
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 156/220 (70%), Gaps = 4/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ G A Y VVNVSSPNT LR LQ K QL+ LL+ V++
Sbjct: 207 VNLGKNKLTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLEHVLK 266
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A K +LVKIAPDL+ D+K+DIADV L K+DGL+VSNTT+ R + L
Sbjct: 267 ARDEVADTEKRTISLLVKIAPDLTEDDKQDIADVAL--ALKLDGLVVSNTTLSRPDTLKG 324
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K ETGGLSG P+R+ ST+++ +MYKLTKGK+P+IGVGGV +G+DA++KI+AGASLVQ+
Sbjct: 325 AAKGETGGLSGFPVRDMSTKVLGDMYKLTKGKIPLIGVGGVSTGQDAYDKIRAGASLVQM 384
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y+ +Y P V R K EL LL ++GY SV AVGAAHK
Sbjct: 385 YSCLIYESPLAVPRAKKELAALLSRDGYKSVIDAVGAAHK 424
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ G+ G A Y VVNVSSPNT LR LQ K QL+ LL+ V++ R+++A K +
Sbjct: 222 YVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLEHVLKARDEVADTEKRTISL 281
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDL+ D+K+DIADV L
Sbjct: 282 LVKIAPDLTEDDKQDIADVAL 302
>gi|399106018|gb|AFP19904.1| dihydroorotate dehydrogenase, partial [synthetic construct]
Length = 370
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 156/220 (70%), Gaps = 4/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ G A Y VVNVSSPNT LR LQ K QL+ LL+ V++
Sbjct: 153 VNLGKNKLTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLEHVLK 212
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A K +LVKIAPDL+ D+K+DIADV L K+DGL+VSNTT+ R + L
Sbjct: 213 ARDEVADTEKRTISLLVKIAPDLTEDDKQDIADVAL--ALKLDGLVVSNTTLSRPDTLKG 270
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K ETGGLSG P+R+ ST+++ +MYKLTKGK+P+IGVGGV +G+DA++KI+AGASLVQ+
Sbjct: 271 AAKGETGGLSGFPVRDMSTKVLGDMYKLTKGKIPLIGVGGVSTGQDAYDKIRAGASLVQM 330
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y+ +Y P V R K EL LL ++GY SV AVGAAHK
Sbjct: 331 YSCLIYESPLAVPRAKKELAALLSRDGYKSVIDAVGAAHK 370
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ G+ G A Y VVNVSSPNT LR LQ K QL+ LL+ V++ R+++A K +
Sbjct: 168 YVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLEHVLKARDEVADTEKRTISL 227
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDL+ D+K+DIADV L
Sbjct: 228 LVKIAPDLTEDDKQDIADVAL 248
>gi|432114172|gb|ELK36205.1| Dihydroorotate dehydrogenase (quinone), mitochondrial [Myotis
davidii]
Length = 451
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 168/277 (60%), Gaps = 38/277 (13%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ +T+ +L LP ++L + K D D +G+ G +A Y
Sbjct: 183 VEHRLRARQQTQARLTEGGLPL-------GINLGKNKTSVDAASDYAEGVRVLGPLADYL 235
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ KD+L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 236 VVNVSSPNTAGLRSLQGKDELRHLLTKVLQERDALKGAHKPALLVKIAPDLTAQDKEDIA 295
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+NTTV R L + ETGGLSG+PLR+ ST+ I EMY LT+GK
Sbjct: 296 GVV--RELGIDGLIVTNTTVSRPASLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGK 353
Query: 260 -----------------------------LPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+PIIGVGGV SG+DA +KI+AGA LVQ+YT+
Sbjct: 354 DSVSPSRICVWLGFWGCDQNRGSLDRCRRVPIIGVGGVSSGQDALDKIQAGACLVQLYTA 413
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y GPP+V R+K ELE LL+++G+ SV+ A+GA H+
Sbjct: 414 LTYWGPPVVGRVKRELEALLKEQGFPSVTDAIGADHR 450
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ KD+L+HLL V++ R+ L P +LVKIA
Sbjct: 224 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKDELRHLLTKVLQERDALKGAHKPALLVKIA 283
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 284 PDLTAQDKEDIAGVV 298
>gi|307202314|gb|EFN81778.1| Dihydroorotate dehydrogenase, mitochondrial [Harpegnathos saltator]
Length = 393
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 156/214 (72%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D V D ++GI KF DVA YFV+NVS PN + LQ + L LL +
Sbjct: 175 VNLGKNKEAKDAVQDYIEGIKKFMDVADYFVINVSCPNISETASLQNRKNLTDLLTRINI 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + + P+L+K++PDLS E++D+ADV+L++K KVDGLI+ NTT+ R +
Sbjct: 235 ARKLVGSEQ--PLLLKLSPDLSDSERQDVADVILNNKTKVDGLILCNTTITRPNVTNPN- 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
KEE GGLSG PL + ST +IS+MYK T G +PIIGVGGVFSG DA++KIKAGASLVQ+YT
Sbjct: 292 KEEFGGLSGAPLNDVSTAMISDMYKRTHGSIPIIGVGGVFSGADAYKKIKAGASLVQLYT 351
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
S++Y+GPP+V +IKSEL ++L+ G++SV++A+G
Sbjct: 352 SYIYNGPPIVGKIKSELCKILEINGFSSVAEAIG 385
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
+Q ++ GI KF DVA YFV+NVS PN + LQ + L LL + R + + P
Sbjct: 187 VQDYIEGIKKFMDVADYFVINVSCPNISETASLQNRKNLTDLLTRINIARKLVGSE--QP 244
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS 125
+L+K++PDLS E++D+ADV+L++
Sbjct: 245 LLLKLSPDLSDSERQDVADVILNN 268
>gi|197097638|ref|NP_001127556.1| dihydroorotate dehydrogenase (quinone), mitochondrial precursor
[Pongo abelii]
gi|75041332|sp|Q5R6X6.1|PYRD_PONAB RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|55731549|emb|CAH92484.1| hypothetical protein [Pongo abelii]
Length = 395
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 152/218 (69%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A VVNVSSPNTA LR LQ K +L+ LL V++
Sbjct: 179 VNLGKNKTSVDAAEDYAEGVRVLGPLADCLVVNVSSPNTAGLRNLQGKAELRRLLTKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 239 ERDGLRGVHRPAVLVKIAPDLTSQDKEDIASVV--KELGIDGLIVTNTTVSRPAGLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ ETGGLSG+P R+ STE I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSETGGLSGKPPRDLSTETIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ + GPP+V ++K ELE LL+++G+ V+ A+GA H+
Sbjct: 357 ALTFWGPPVVGKVKRELEALLKEQGFCRVTDAIGADHR 394
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A VVNVSSPNTA LR LQ K +L+ LL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADCLVVNVSSPNTAGLRNLQGKAELRRLLTKVLQERDGLRGVHRPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTSQDKEDIASVV 271
>gi|351701737|gb|EHB04656.1| Dihydroorotate dehydrogenase, mitochondrial, partial
[Heterocephalus glaber]
Length = 396
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 151/224 (67%), Gaps = 8/224 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +GI G +A Y VVNVSSPNT LR LQ K +L LL V++
Sbjct: 174 INLGKNKTSVDAAADYAEGIRVLGPLADYLVVNVSSPNTPGLRSLQGKTELCCLLTKVLQ 233
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLIV+NTTV R L
Sbjct: 234 ERDALQRAQKPAVLVKIAPDLTAQDKEDIACVV--RELGIDGLIVTNTTVSRPAGLRGVL 291
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGK------LPIIGVGGVFSGKDAFEKIKAGAS 283
E GGLSG+PLR+ ST+ I EMY LT+GK +PIIGVGGV SG+DA EKI+AGAS
Sbjct: 292 HSEAGGLSGKPLRDLSTQTIREMYALTQGKASAVCLIPIIGVGGVSSGQDALEKIRAGAS 351
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
LVQ+YT+ Y GPP+V R+K ELE LL+++G++ V+ A+GA H+
Sbjct: 352 LVQLYTALTYGGPPVVGRVKRELEALLKEQGFSRVTDAIGADHR 395
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
GI G +A Y VVNVSSPNT LR LQ K +L LL V++ R+ L P +LVKIA
Sbjct: 192 GIRVLGPLADYLVVNVSSPNTPGLRSLQGKTELCCLLTKVLQERDALQRAQKPAVLVKIA 251
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 252 PDLTAQDKEDIACVV 266
>gi|299469666|emb|CBN76520.1| dihydroorotate dehydrogenase [Ectocarpus siliculosus]
Length = 464
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 151/212 (71%), Gaps = 6/212 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---V 176
D D KGI G A Y VVNVSSPNT LR LQ ++ ++ ++ R+Q+
Sbjct: 247 DSSADFCKGIRTLGCYADYLVVNVSSPNTPGLRDLQGVKAIRAVILAAMDARDQVCESTG 306
Query: 177 KPLP-PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P+P P+LVKIAPDL+ EK+DIA+VVL +K VDGLIVSNTTV R YL + K E GG
Sbjct: 307 NPMPLPLLVKIAPDLTEREKRDIANVVLSTK--VDGLIVSNTTVSRPSYLRSESKGEAGG 364
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG+PL STE I +MY+LTKGK+P+IGVGGV +G++A++KI+AGASLVQ+Y+ VY G
Sbjct: 365 LSGKPLTKMSTETIRDMYRLTKGKVPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKG 424
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
P V IK+EL +LL+ +G+ SV++AVG+ H+
Sbjct: 425 PGAVPGIKAELADLLKTDGFTSVAEAVGSDHR 456
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL---KPLP-PIL 103
GI G A Y VVNVSSPNT LR LQ ++ ++ ++ R+Q+ P+P P+L
Sbjct: 255 GIRTLGCYADYLVVNVSSPNTPGLRDLQGVKAIRAVILAAMDARDQVCESTGNPMPLPLL 314
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGIL 130
VKIAPDL+ EK+DIA+VVL + V G++
Sbjct: 315 VKIAPDLTEREKRDIANVVLSTKVDGLI 342
>gi|17509475|ref|NP_491930.1| Protein DHOD-1 [Caenorhabditis elegans]
gi|351061222|emb|CCD68985.1| Protein DHOD-1 [Caenorhabditis elegans]
Length = 411
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 150/218 (68%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D LD G+ F Y V+NVSSPNT LR +Q K L+ LL V +
Sbjct: 190 VNLGKNKLTEDAKLDYEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVHQ 249
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
++ P + +KIAPDL E KDIA VV + K +DG+IVSNTT+ R +YL +
Sbjct: 250 ALEMHKLEKQPQVFLKIAPDLIESELKDIAQVVTNKKFAIDGIIVSNTTIARPDYLRSEN 309
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG P+R STE + ++YKLT G++PIIG GGVFSG DA+EKI+AGASLVQ+Y+
Sbjct: 310 KTETGGLSGAPVREISTECVRKIYKLTNGQIPIIGCGGVFSGADAYEKIRAGASLVQLYS 369
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+FVY G P++ +IK EL ELL+K+G++ VS+A+GA H+
Sbjct: 370 AFVYEGFPVIGKIKRELVELLRKDGFSHVSEAIGADHR 407
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ +G+ F Y V+NVSSPNT LR +Q K L+ LL V + L+ P + +
Sbjct: 205 YEIGVNYFAPHCDYLVLNVSSPNTPGLRSMQKKSDLEKLLAYVHQALEMHKLEKQPQVFL 264
Query: 105 KIAPDLSLDEKKDIADVVLD---SVKGIL 130
KIAPDL E KDIA VV + ++ GI+
Sbjct: 265 KIAPDLIESELKDIAQVVTNKKFAIDGII 293
>gi|241564923|ref|XP_002401966.1| dihydroorotate dehydrogenase, putative [Ixodes scapularis]
gi|215501942|gb|EEC11436.1| dihydroorotate dehydrogenase, putative [Ixodes scapularis]
Length = 375
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 147/202 (72%), Gaps = 2/202 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ A D +G+LKFG++A Y V+NVSSPNT LR LQ + +L+ LLK V+
Sbjct: 176 VNLGKNKESASAADDYAQGVLKFGELADYLVINVSSPNTPGLRGLQGQRELRQLLKQVLG 235
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L+ + P+LVK+APDLS EK DIA VV +C+VDGL+V NTTV+R L + +
Sbjct: 236 ARDSLSKRT--PVLVKVAPDLSDQEKADIAAVVTSKECRVDGLVVCNTTVERPPELHSEH 293
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ + GGLSG PL + ST I++MY+LTKG +PIIGVGGV +G+DA+ K+KAGASL+Q+Y+
Sbjct: 294 RHQAGGLSGRPLTDLSTRTIADMYRLTKGCMPIIGVGGVLTGEDAYAKVKAGASLLQMYS 353
Query: 290 SFVYHGPPLVTRIKSELEELLQ 311
+ V++GPP V +K L ELL+
Sbjct: 354 ALVFYGPPAVCTVKERLAELLR 375
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+LKFG++A Y V+NVSSPNT LR LQ + +L+ LLK V+ R+ L+ + P+LVK+A
Sbjct: 194 GVLKFGELADYLVINVSSPNTPGLRGLQGQRELRQLLKQVLGARDSLSKR--TPVLVKVA 251
Query: 108 PDLSLDEKKDIADVV 122
PDLS EK DIA VV
Sbjct: 252 PDLSDQEKADIAAVV 266
>gi|195998173|ref|XP_002108955.1| hypothetical protein TRIADDRAFT_20390 [Trichoplax adhaerens]
gi|190589731|gb|EDV29753.1| hypothetical protein TRIADDRAFT_20390 [Trichoplax adhaerens]
Length = 394
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 155/218 (71%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K V D VKGI G A Y V+NVSSPNT LR LQ K++L+ ++ +
Sbjct: 177 INLGKNKLSDSAVEDYVKGIQAIGKYADYLVINVSSPNTPGLRALQKKEELQTIITQISI 236
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +L KP +L+K+APDL++ +KKDIADV+L + VDGL++SNTTV R L +
Sbjct: 237 EREKLKNKP--ALLIKLAPDLTVQDKKDIADVILKERRNVDGLVISNTTVRRPNCLTSVS 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PLR +T+ I +MY+LT+GK+PIIGVGGV SG+DA+EKI+AGASL+Q+ T
Sbjct: 295 KSEAGGLSGPPLREMATKTIYDMYRLTEGKIPIIGVGGVQSGEDAYEKIRAGASLIQVLT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y+GP ++ +IK++L LL+++G+ SV +AVG H+
Sbjct: 355 ALTYNGPSIIQKIKADLVTLLRQDGFKSVEEAVGIDHR 392
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
Query: 19 SGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 78
SG G N LS A ++ ++ GI G A Y V+NVSSPNT LR LQ K+
Sbjct: 172 SGIVGINLGKNKLSDSA------VEDYVKGIQAIGKYADYLVINVSSPNTPGLRALQKKE 225
Query: 79 QLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGI 129
+L+ ++ + R +L K P +L+K+APDL++ +KKDIADV+L + +
Sbjct: 226 ELQTIITQISIEREKLKNK--PALLIKLAPDLTVQDKKDIADVILKERRNV 274
>gi|195452378|ref|XP_002073327.1| GK14072 [Drosophila willistoni]
gi|194169412|gb|EDW84313.1| GK14072 [Drosophila willistoni]
Length = 397
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 148/214 (69%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L ++ V D V+G+ FG V+ Y VVNVSSPNT LR +Q K++L LL+ V
Sbjct: 175 VNLGRNRNTRSPVSDYVEGVKVFGPVSDYLVVNVSSPNTKGLRDMQGKEKLSELLEAVNS 234
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R QL PIL+K++PDL + +DIA V+ +VDGLIVSNTTV R D +
Sbjct: 235 ARAQLEKNKNVPILLKLSPDLHPSDMQDIASVIKKKNTRVDGLIVSNTTVTRENLQDLQL 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG+PLR +STE+I++MY LT GK+PI+GVGGV SG+DAFEKI+AGAS VQ+YT
Sbjct: 295 AKENGGLSGQPLRTRSTEMIAQMYVLTNGKVPIVGVGGVSSGQDAFEKIEAGASYVQLYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP LV IK +L L++++G+++V VG
Sbjct: 355 ALVYEGPGLVEDIKEDLSSLIKQKGFSNVQDVVG 388
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG V+ Y VVNVSSPNT LR +Q K++L LL+ V R QL PIL+
Sbjct: 190 YVEGVKVFGPVSDYLVVNVSSPNTKGLRDMQGKEKLSELLEAVNSARAQLEKNKNVPILL 249
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDL + +DIA V+
Sbjct: 250 KLSPDLHPSDMQDIASVI 267
>gi|46201853|ref|ZP_00054222.2| COG0167: Dihydroorotate dehydrogenase [Magnetospirillum
magnetotacticum MS-1]
Length = 355
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 148/218 (67%), Gaps = 2/218 (0%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + KD D D KG + ++ Y V+NVSSPNT LR LQ +DQL+ L+
Sbjct: 137 NLGKNKDTEDAAADYEKGAARLAPMSDYLVINVSSPNTPGLRALQGRDQLESLVGRTRAA 196
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
+ PP+L+KIAPDL+ ++ DIA V L +DGLIVSNTT+ R + L ++
Sbjct: 197 LTKAMPSGAPPLLLKIAPDLAWEDLSDIATVAL--AGALDGLIVSNTTIARPDSLRSKNA 254
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+TGGLSG PL ST ++ +Y+LT+GKLPIIGVGG+ SG +A+ KI+AGASLVQ+Y++
Sbjct: 255 GQTGGLSGAPLFESSTAMLRRVYELTQGKLPIIGVGGIASGSEAYAKIRAGASLVQLYSA 314
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
VY GP LVTRIK E+ ELL ++G++S++QAVGA H+
Sbjct: 315 MVYEGPALVTRIKREMAELLARDGFSSIAQAVGADHRG 352
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G + ++ Y V+NVSSPNT LR LQ +DQL+ L+ + PP+L+KIA
Sbjct: 154 GAARLAPMSDYLVINVSSPNTPGLRALQGRDQLESLVGRTRAALTKAMPSGAPPLLLKIA 213
Query: 108 PDLSLDEKKDIADVVL 123
PDL+ ++ DIA V L
Sbjct: 214 PDLAWEDLSDIATVAL 229
>gi|224081334|ref|XP_002306374.1| predicted protein [Populus trichocarpa]
gi|222855823|gb|EEE93370.1| predicted protein [Populus trichocarpa]
Length = 457
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 157/221 (71%), Gaps = 5/221 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ + Y V+NVSSPNT LR LQ + QLK L+K V
Sbjct: 239 VNLGKNKTSEDAAADYVQGVHSLSQYSDYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQA 298
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD- 226
R+ Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI+SNTT+ R + ++
Sbjct: 299 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--ALRLDGLIISNTTISRPDSVNK 356
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ EETGGLSG+PL N ST ++ EM+ LT+GK+P+IG GGVFSG+DA++K++AGA+LVQ
Sbjct: 357 SPVAEETGGLSGKPLLNLSTNILKEMFILTRGKIPLIGCGGVFSGEDAYKKVRAGATLVQ 416
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT F Y GP L+ RIK+EL E L+++G+ S+S+AVGA ++
Sbjct: 417 LYTGFAYGGPALIPRIKAELAECLERDGFKSISEAVGADYR 457
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ + Y V+NVSSPNT LR LQ + QLK L+K V R+ Q + PP+
Sbjct: 254 YVQGVHSLSQYSDYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 313
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 314 LVKIAPDLSKEDLEDIAAVAL 334
>gi|347736558|ref|ZP_08869167.1| dihydroorotate oxidase [Azospirillum amazonense Y2]
gi|346919921|gb|EGY01242.1| dihydroorotate oxidase [Azospirillum amazonense Y2]
Length = 355
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 150/217 (69%), Gaps = 6/217 (2%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ + K+ AD D V GI + +A Y VVNVSSPNT LR LQ + L LL +E
Sbjct: 145 NVGKNKETADAASDYVIGIRRLAPLADYLVVNVSSPNTPGLRSLQGRQALTDLLAACLEA 204
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R P+L+K+APDL+ D+K D+A+V L S +DGLIVSNTT++R + L ++
Sbjct: 205 RGSRRT----PLLLKVAPDLTEDDKVDVAEVALASG--IDGLIVSNTTLERPDGLTPAHR 258
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG+PL KST ++ + Y+LT GKLP++GVGG+ SG A+ KI+AGASLVQIY++
Sbjct: 259 AEAGGLSGQPLFEKSTSVLRDFYRLTGGKLPLVGVGGIGSGAQAYAKIRAGASLVQIYSA 318
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YHGP LV IK +L +LL+++G+ +V+QAVGA HK
Sbjct: 319 LIYHGPGLVAAIKRDLADLLRRDGFTNVAQAVGADHK 355
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++GI + +A Y VVNVSSPNT LR LQ + L LL +E R P+L+
Sbjct: 159 YVIGIRRLAPLADYLVVNVSSPNTPGLRSLQGRQALTDLLAACLEARGSRRT----PLLL 214
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
K+APDL+ D+K D+A+V L S
Sbjct: 215 KVAPDLTEDDKVDVAEVALAS 235
>gi|194745546|ref|XP_001955248.1| GF16331 [Drosophila ananassae]
gi|190628285|gb|EDV43809.1| GF16331 [Drosophila ananassae]
Length = 411
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 151/220 (68%), Gaps = 3/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ + D V+G+ FG VA Y V+NVSSPNT LR +Q K +L LL+ V E
Sbjct: 187 VNLGRNKETMSPMADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQTKSKLTELLEHVNE 246
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +L PIL+K++PDLSL + KDI V+ K +VDGLIV+NTTV R + ++A
Sbjct: 247 ARTRLERNKNVPILLKLSPDLSLSDMKDIVSVINRKKSRVDGLIVTNTTVSR-DNINASN 305
Query: 230 K--EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K +E GGLSGEPLR +STE+I++MY LT GK+PIIGVGGV SG DA+EKI+AGAS VQ+
Sbjct: 306 KTAKEVGGLSGEPLRARSTEMIAQMYVLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQV 365
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
YT+ VY GP LV +IK+EL L+ G+ +V VG K
Sbjct: 366 YTALVYEGPGLVDQIKAELSSLITSLGHANVQDVVGTNAK 405
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q K +L LL+ V E R +L PIL+
Sbjct: 202 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQTKSKLTELLEHVNEARTRLERNKNVPILL 261
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSL + KDI V+
Sbjct: 262 KLSPDLSLSDMKDIVSVI 279
>gi|452963861|gb|EME68916.1| dihydroorotate dehydrogenase 2 [Magnetospirillum sp. SO-1]
Length = 355
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 7/236 (2%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA +P IL +L + KD D D KG + ++ Y V+NVSSPNT LR
Sbjct: 124 KLAARPRAGIL-----GANLGKNKDTEDAAADYEKGAARLAPLSDYLVINVSSPNTPGLR 178
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + QL+ L+ + PP+L+KIAPDL+ ++ DIA V +D +DGL
Sbjct: 179 ALQGRGQLESLVGRTRAALTKAMPSGAPPLLLKIAPDLAWEDLSDIAAVAMDGA--LDGL 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
IVSNTTV R E L + ETGGLSG PL ST ++ +Y+LT+GKLPIIGVGG+ SG
Sbjct: 237 IVSNTTVARPETLRSANARETGGLSGAPLFETSTAMLRRVYELTRGKLPIIGVGGIASGS 296
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+A+ K++AGASLVQ+Y++ VY GP LVTRIK E+ +LL ++G+ S++QAVGA H+
Sbjct: 297 EAYAKVRAGASLVQLYSAMVYEGPALVTRIKREMADLLARDGFASITQAVGADHRG 352
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G + ++ Y V+NVSSPNT LR LQ + QL+ L+ + PP+L+KIA
Sbjct: 154 GAARLAPLSDYLVINVSSPNTPGLRALQGRGQLESLVGRTRAALTKAMPSGAPPLLLKIA 213
Query: 108 PDLSLDEKKDIADVVLD-SVKGILKFGDVAHYFVVNVSSPNTANLRK 153
PDL+ ++ DIA V +D ++ G++ V++ V + +AN R+
Sbjct: 214 PDLAWEDLSDIAAVAMDGALDGLI----VSNTTVARPETLRSANARE 256
>gi|449464304|ref|XP_004149869.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 153/218 (70%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D D V+G+ A Y V+NVSSPNT LR LQ + QLK L++ V E
Sbjct: 237 VNLGKNKNSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRALQGRKQLKDLVRKVQE 296
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD- 226
RN Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI++NTTV R E +D
Sbjct: 297 ARNEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--ALRLDGLIITNTTVSRPEPVDK 354
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ E GGLSG+PL N ST ++ EMY LT+GK+P+IG GG+ SG+DA++KI+AGASLVQ
Sbjct: 355 SPLAAEAGGLSGKPLFNLSTNVLKEMYALTRGKIPLIGCGGISSGEDAYKKIRAGASLVQ 414
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+F Y GP L+ +IK EL E L+++G+ SV +AVGA
Sbjct: 415 LYTAFAYGGPALIPQIKWELAECLERDGFKSVQEAVGA 452
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LR LQ + QLK L++ V E RN Q + PP+
Sbjct: 252 YVQGVHTLSQYADYLVINVSSPNTPGLRALQGRKQLKDLVRKVQEARNEMQWGEEGPPPL 311
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 312 LVKIAPDLSKEDLEDIAAVAL 332
>gi|83312989|ref|YP_423253.1| dihydroorotate dehydrogenase 2 [Magnetospirillum magneticum AMB-1]
gi|82947830|dbj|BAE52694.1| Dihydroorotate dehydrogenase [Magnetospirillum magneticum AMB-1]
Length = 389
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 8/221 (3%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + KD D D KG + ++ Y V+NVSSPNT LR LQ +DQL+ L V T
Sbjct: 171 NLGKNKDTEDAAADYEKGAARLAPLSDYLVINVSSPNTPGLRALQGRDQLESL---VGRT 227
Query: 171 RNQL-AVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R L A P PP+L+KIAPDL+ ++ DIA V L+ +DGLIVSNTTV R E L +
Sbjct: 228 RAALTAAMPSGAPPLLLKIAPDLAWEDLSDIAAVALEGA--LDGLIVSNTTVARPESLRS 285
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+TGGLSG PL ST ++ +Y+LT+GKLPIIGVGG+ SG +A+ KI+AGASLVQ+
Sbjct: 286 ANAGQTGGLSGAPLFESSTAMLRRVYELTRGKLPIIGVGGIASGSEAYAKIRAGASLVQV 345
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
Y++ VY GP L+TRIK E+ +LL ++G+ S+++AVGA H+
Sbjct: 346 YSAMVYEGPALITRIKHEMVDLLARDGFKSIAEAVGADHRG 386
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKP--LPPILV 104
G + ++ Y V+NVSSPNT LR LQ +DQL+ L V TR L A P PP+L+
Sbjct: 188 GAARLAPLSDYLVINVSSPNTPGLRALQGRDQLESL---VGRTRAALTAAMPSGAPPLLL 244
Query: 105 KIAPDLSLDEKKDIADVVLDSV 126
KIAPDL+ ++ DIA V L+
Sbjct: 245 KIAPDLAWEDLSDIAAVALEGA 266
>gi|387915292|gb|AFK11255.1| dihydroorotate dehydrogenase-like protein [Callorhinchus milii]
Length = 418
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K AD D V+G+ + G +A Y VVNVSSPNT LR LQ K +L+HLL V++
Sbjct: 179 INLGKNKLSADAAADYVEGMRRLGPLADYLVVNVSSPNTPGLRALQDKGELRHLLGKVLK 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +KKDIA VV ++ VDGLIV+NTT+ R E L
Sbjct: 239 ERDNLKGGQKPAVLVKIAPDLTAQDKKDIAVVV--TELGVDGLIVTNTTIRRPESLQDPL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PLR ST+ + EMY LTKG++PI+GVGG+ SG DA EKI+AGA+L+Q YT
Sbjct: 297 RTEPGGLSGAPLREMSTQAVREMYLLTKGRIPIVGVGGIGSGADALEKIRAGATLIQFYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ Y GPP+V +IK ELE+LL+++G++SV +AVGA HK+
Sbjct: 357 ALTYQGPPVVNKIKRELEQLLKEQGFSSVGEAVGADHKA 395
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ + G +A Y VVNVSSPNT LR LQ K +L+HLL V++ R+ L P +LV
Sbjct: 194 YVEGMRRLGPLADYLVVNVSSPNTPGLRALQDKGELRHLLGKVLKERDNLKGGQKPAVLV 253
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +KKDIA VV + V G++
Sbjct: 254 KIAPDLTAQDKKDIAVVVTELGVDGLI 280
>gi|168010221|ref|XP_001757803.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691079|gb|EDQ77443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 532
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 154/222 (69%), Gaps = 5/222 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+N+SSPNT LRKLQ + QL+ L+K V+
Sbjct: 312 VNLGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLQDLIKKVLA 371
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLD 226
R+ Q PP+LVKIAPDLS + DIA V L ++DGL+V+NTTV R + L
Sbjct: 372 ARDEMQWGEAGPPPLLVKIAPDLSKQDLADIAAVAL--ALRLDGLVVTNTTVSRPDAVLG 429
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ ETGGLSG+PL + STE++ +MY LTKGK+P++G GG+ SG+DA++KI+AGASLVQ
Sbjct: 430 LVHSTETGGLSGKPLFSMSTEILHDMYVLTKGKIPLVGCGGISSGEDAYKKIRAGASLVQ 489
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+YT+F Y GP ++ RIKSEL L+++G+ S+ +AVGA H+S
Sbjct: 490 LYTAFAYEGPSILPRIKSELAACLERDGFKSLREAVGADHRS 531
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVK 105
G+ A Y V+N+SSPNT LRKLQ + QL+ L+K V+ R+++ PP+LVK
Sbjct: 330 GVHTLSQYADYLVINISSPNTPGLRKLQGRKQLQDLIKKVLAARDEMQWGEAGPPPLLVK 389
Query: 106 IAPDLSLDEKKDIADVVL 123
IAPDLS + DIA V L
Sbjct: 390 IAPDLSKQDLADIAAVAL 407
>gi|348516537|ref|XP_003445795.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Oreochromis niloticus]
Length = 395
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 160/218 (73%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D ++G+ G +A Y VVNVSSPNT LR LQ K +L+ LL TV++
Sbjct: 177 INLGKNKLSRDAGADYLEGVKVLGPLADYLVVNVSSPNTPGLRDLQGKAELRQLLHTVLK 236
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + PP+LVKIAPDL+ +K+DIADVV ++ VDGL+VSNTTV R E L
Sbjct: 237 ERDALQEERKPPVLVKIAPDLTAQDKQDIADVV--TELGVDGLMVSNTTVSRPETLQDPS 294
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSGEPLR+ ST + EMY LTKGK+PIIG+GGV SG+DA +KI+AGASLVQ+YT
Sbjct: 295 KSEVGGLSGEPLRDLSTRTVREMYNLTKGKIPIIGIGGVASGQDAMDKIRAGASLVQLYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V +IK ELE+LL +G+++VS+AVGA H+
Sbjct: 355 ALTYQGPPVVIKIKRELEQLLNDQGFSNVSEAVGADHR 392
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L G+ G +A Y VVNVSSPNT LR LQ K +L+ LL TV++ R+ L + PP+LV
Sbjct: 192 YLEGVKVLGPLADYLVVNVSSPNTPGLRDLQGKAELRQLLHTVLKERDALQEERKPPVLV 251
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
KIAPDL+ +K+DIADVV + V G++
Sbjct: 252 KIAPDLTAQDKQDIADVVTELGVDGLM 278
>gi|224094011|ref|XP_002310061.1| predicted protein [Populus trichocarpa]
gi|222852964|gb|EEE90511.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 156/222 (70%), Gaps = 7/222 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ + Y +NVSSPNT LR LQ + QLK L+K V
Sbjct: 230 VNLGKNKTSEDAAADYVRGVHTLSQYSDYLFINVSSPNTPGLRMLQGRKQLKELVKKVQA 289
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI+SNTT+ R +++
Sbjct: 290 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVSL--ALRLDGLIISNTTISRPDFVK- 346
Query: 228 RY--KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+Y EETGGLSG+PL N ST ++ EMY LT+GK+P+IG GGVFSG+DA++KI+AGA+LV
Sbjct: 347 KYPVAEETGGLSGKPLLNLSTNILKEMYILTRGKIPLIGCGGVFSGEDAYKKIRAGATLV 406
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Q+YT F Y GP L+ R+K+EL E L+++G+ S+ +AVGA ++
Sbjct: 407 QLYTGFAYGGPALIPRMKAELAECLERDGFKSILEAVGADYR 448
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ + Y +NVSSPNT LR LQ + QLK L+K V R+ Q + PP+
Sbjct: 245 YVRGVHTLSQYSDYLFINVSSPNTPGLRMLQGRKQLKELVKKVQAARDEMQWGEEGPPPL 304
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 305 LVKIAPDLSKEDLEDIAAVSL 325
>gi|392383483|ref|YP_005032680.1| dihydro-orotate oxidase [Azospirillum brasilense Sp245]
gi|356878448|emb|CCC99333.1| dihydro-orotate oxidase [Azospirillum brasilense Sp245]
Length = 357
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 2/217 (0%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + KD + D V G+ + +A Y VVNVSSPNT LR LQ +D L+ LL V++
Sbjct: 143 NLGKNKDTVEAADDYVLGVTRVAALADYLVVNVSSPNTPGLRALQGRDPLRTLLGRVLDA 202
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R+ + PP+L+KIAPDL+ ++K DIA V L+S +DGLIVSNTT+ R + +
Sbjct: 203 RSACRLAKAPPVLLKIAPDLTDEDKADIAAVALESG--IDGLIVSNTTIARPAEIPEPLR 260
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL ST ++ EMY LT GK+P++GVGG+ SG DA+ KI+AGASLVQ Y++
Sbjct: 261 AEAGGLSGRPLFAPSTAVLREMYGLTGGKVPLVGVGGIASGADAYAKIRAGASLVQFYSA 320
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VY GP LV I+ +L LL+++G+ S+S AVGA H+
Sbjct: 321 LVYAGPALVLAIRRDLAALLRRDGFASLSDAVGADHR 357
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++LG+ + +A Y VVNVSSPNT LR LQ +D L+ LL V++ R+ L PP+L+
Sbjct: 157 YVLGVTRVAALADYLVVNVSSPNTPGLRALQGRDPLRTLLGRVLDARSACRLAKAPPVLL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL+ ++K DIA V L+S
Sbjct: 217 KIAPDLTDEDKADIAAVALES 237
>gi|407774105|ref|ZP_11121404.1| dihydroorotate dehydrogenase 2 [Thalassospira profundimaris WP0211]
gi|407282764|gb|EKF08321.1| dihydroorotate dehydrogenase 2 [Thalassospira profundimaris WP0211]
Length = 378
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 152/215 (70%), Gaps = 4/215 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + K D D KG+ G A Y VVNVSSPNT LR LQ + L+ LLK V++
Sbjct: 140 NLGKNKYSEDAADDYAKGVEALGPYADYLVVNVSSPNTPGLRALQGRAPLEKLLKAVIKA 199
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
RN A P+L+K+APDL+ ++K DIA VV +K ++DG+IVSNTT+DR L++ +
Sbjct: 200 RNSFAKGV--PVLLKVAPDLTEEDKSDIAAVV--TKVRLDGMIVSNTTIDRPVGLNSYDQ 255
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+E GGLSG PL ST+++++ Y+LT+GK+P+IGVGG+ SGKDA+EKI GASLVQ+Y+S
Sbjct: 256 DEKGGLSGPPLMEPSTKVLADFYRLTEGKVPLIGVGGIASGKDAYEKILNGASLVQLYSS 315
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
VYHG LVT IK +L L+K+G+ +VS AVGAA
Sbjct: 316 LVYHGVELVTEIKEDLARRLRKDGFANVSDAVGAA 350
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G A Y VVNVSSPNT LR LQ + L+ LLK V++ RN A P+L+K+A
Sbjct: 157 GVEALGPYADYLVVNVSSPNTPGLRALQGRAPLEKLLKAVIKARNSFAKG--VPVLLKVA 214
Query: 108 PDLSLDEKKDIADVV 122
PDL+ ++K DIA VV
Sbjct: 215 PDLTEEDKSDIAAVV 229
>gi|159482729|ref|XP_001699420.1| dihydropryrimidine dehydrogenase [Chlamydomonas reinhardtii]
gi|158272871|gb|EDO98666.1| dihydropryrimidine dehydrogenase [Chlamydomonas reinhardtii]
Length = 387
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 153/229 (66%), Gaps = 5/229 (2%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P L + ++L + K+ D LD G+ K A Y VVNVSSPNT LR LQ + +L
Sbjct: 136 PALKRGPLGVNLGKNKNSKDAALDYCIGLTKLATHADYLVVNVSSPNTPGLRALQGRKEL 195
Query: 161 KHLLKTVVETRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
+ L+ V TR+++ PP+L+K+APDL+ +K+DIA V L C VDGLI+SNTT
Sbjct: 196 EALVNQVKGTRDRMVWGQSGPPPLLIKVAPDLNELDKRDIAAVAL--ACGVDGLIISNTT 253
Query: 219 VDR-YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
+ R E + +E GGLSG PL ST ++S+MY+LT G+LP++G GGV SG+DA++K
Sbjct: 254 IQRPGEVANYPAAQEAGGLSGPPLFAMSTGVLSDMYRLTGGRLPLVGCGGVASGEDAYKK 313
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
I+AGASLVQ+YT F Y GP L+ RIK EL E L+++G+ SV+ AVGA H
Sbjct: 314 IRAGASLVQLYTVFAYEGPALIPRIKRELAECLKRDGFTSVADAVGADH 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPI 102
+ +G+ K A Y VVNVSSPNT LR LQ + +L+ L+ V TR+++ PP+
Sbjct: 160 YCIGLTKLATHADYLVVNVSSPNTPGLRALQGRKELEALVNQVKGTRDRMVWGQSGPPPL 219
Query: 103 LVKIAPDLSLDEKKDIADVVLD-SVKGIL-------KFGDVAHY 138
L+K+APDL+ +K+DIA V L V G++ + G+VA+Y
Sbjct: 220 LIKVAPDLNELDKRDIAAVALACGVDGLIISNTTIQRPGEVANY 263
>gi|428169446|gb|EKX38380.1| hypothetical protein GUITHDRAFT_115520 [Guillardia theta CCMP2712]
Length = 373
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 152/213 (71%), Gaps = 4/213 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K AD + D V G+ KFG++A + VVN+SSPNT LR+LQ++ +L+ L+ V++ RN+
Sbjct: 164 KNKTADAIPDYVYGVKKFGELADFLVVNISSPNTPGLRQLQSRKELEGLISAVMKVRNES 223
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG 234
P P+LVKIAPDL+ E K+I V +K KVDG++V+NTT+ R E L KEETG
Sbjct: 224 C--PKVPLLVKIAPDLTDTELKEICQVA--TKMKVDGMVVTNTTISRPESLTGAAKEETG 279
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL++ STE+I ++YKLT GKLP+IGVGGV +G+D ++KI+AGASLV++Y+ Y
Sbjct: 280 GLSGLPLKDMSTEVIRKVYKLTGGKLPLIGVGGVGTGQDVYDKIRAGASLVEMYSRLAYE 339
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
GP +IK EL LL+ +G+ +V+ A+GA K
Sbjct: 340 GPWSPPKIKLELSRLLKADGFENVADAIGADAK 372
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KFG++A + VVN+SSPNT LR+LQ++ +L+ L+ V++ RN+ P P+LV
Sbjct: 174 YVYGVKKFGELADFLVVNISSPNTPGLRQLQSRKELEGLISAVMKVRNESC--PKVPLLV 231
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ E K+I V
Sbjct: 232 KIAPDLTDTELKEICQVA 249
>gi|32487508|emb|CAE05752.1| OSJNBa0064G10.3 [Oryza sativa Japonica Group]
gi|82468505|gb|ABB76659.1| putative dihydroorotate dehydrogenase [Oryza sativa Japonica Group]
gi|90399060|emb|CAJ86109.1| H0103C06.13 [Oryza sativa Indica Group]
gi|90399310|emb|CAH68205.1| H0101F08.3 [Oryza sativa Indica Group]
gi|125550217|gb|EAY96039.1| hypothetical protein OsI_17913 [Oryza sativa Indica Group]
gi|125592052|gb|EAZ32402.1| hypothetical protein OsJ_16613 [Oryza sativa Japonica Group]
Length = 469
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 5/221 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LRKLQ + QLK L+K V
Sbjct: 251 VNLGKNKISEDATADYVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQA 310
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTT+ R D
Sbjct: 311 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--ALRLDGLIISNTTISRPSPADT 368
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E GGLSG+PL + ST ++ EMY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 369 HPLAQEAGGLSGKPLFDLSTNVLREMYILTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQ 428
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT+F Y GP L+ RIK+EL E L+++G+ SV +AVGA K
Sbjct: 429 LYTAFAYGGPALIPRIKAELAECLERDGFKSVQEAVGADFK 469
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V R+ Q A PP+
Sbjct: 266 YVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQAARDEMQWAEDGPPPL 325
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 326 LVKIAPDLSKQDLEDIAAVAL 346
>gi|381168916|ref|ZP_09878097.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Phaeospirillum molischianum DSM 120]
gi|380681932|emb|CCG42917.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Phaeospirillum molischianum DSM 120]
Length = 358
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + K D D KG + ++ Y V+NVSSPNT LR LQ +DQL+ L++
Sbjct: 139 NLGKNKTTEDAAADYEKGAARLAPLSDYLVINVSSPNTPGLRALQGRDQLESLVRRTRAA 198
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
+ K PP+L+KIAPDL+ ++ DIA V L +DGLIVSNTTV R ++L +
Sbjct: 199 LIRSMPKAAPPLLLKIAPDLAWEDLSDIAAVAL--AGDLDGLIVSNTTVARPDWLRSPQA 256
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
ETGGLSG PL ST ++ MY+LT GKLPIIGVGG+ SG +A+ KI+AGASLVQ+Y++
Sbjct: 257 TETGGLSGAPLFASSTAMLRRMYELTHGKLPIIGVGGIASGSEAYAKIRAGASLVQLYSA 316
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y GP LVTRIK E+ +LL ++G++S+++AVGA
Sbjct: 317 LIYGGPGLVTRIKREMHDLLLRDGFSSITEAVGA 350
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G + ++ Y V+NVSSPNT LR LQ +DQL+ L++ + K PP+L+KIA
Sbjct: 156 GAARLAPLSDYLVINVSSPNTPGLRALQGRDQLESLVRRTRAALIRSMPKAAPPLLLKIA 215
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
PDL+ ++ DIA V L GD+ V N + LR QA +
Sbjct: 216 PDLAWEDLSDIAAVAL--------AGDLDGLIVSNTTVARPDWLRSPQATE 258
>gi|168057897|ref|XP_001780948.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667582|gb|EDQ54208.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 167/263 (63%), Gaps = 14/263 (5%)
Query: 72 RKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP----DLSLDEKKDIADVVLDSVK 127
R+L A+ H + + ET +L P +I ++L + K D D V+
Sbjct: 208 RRLGAQ----HGKRRLAETTGEL-FGSASPFATRITGTGIVGVNLGKNKTSEDAAADYVQ 262
Query: 128 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLAVKPLPPILVK 185
G+ A Y V+NVSSPNT LRKLQ + QL+ L+K V+ R+ Q PP+LVK
Sbjct: 263 GVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLQDLIKKVLAARDEMQWGEAGPPPLLVK 322
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLDARYKEETGGLSGEPLRNK 244
I+PDLS + DIA V L ++DGL+V+NTTV R + L + ETGGLSG+PL N
Sbjct: 323 ISPDLSKQDLADIAAVALS--LRIDGLVVTNTTVSRPDSILGLVHSTETGGLSGKPLFNI 380
Query: 245 STELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKS 304
S E++ ++Y LTKGK+P++G GG+ SG+DA++KI+AGASLV++YT+F Y GP ++ RIKS
Sbjct: 381 SNEILRDIYVLTKGKIPLVGCGGISSGEDAYKKIRAGASLVELYTAFAYEGPAILPRIKS 440
Query: 305 ELEELLQKEGYNSVSQAVGAAHK 327
EL L+++G+ S+ +AVGA H+
Sbjct: 441 ELASCLERDGFKSIREAVGADHR 463
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QL+ L+K V+ R+++ PP+
Sbjct: 260 YVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLQDLIKKVLAARDEMQWGEAGPPPL 319
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKI+PDLS + DIA V L
Sbjct: 320 LVKISPDLSKQDLADIAAVAL 340
>gi|9909094|dbj|BAB11988.1| dihydroorotate dehydrogenase [Oryza sativa Japonica Group]
Length = 468
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 5/221 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LRKLQ + QLK L+K V
Sbjct: 250 VNLGKNKISEDATADYVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQA 309
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTT+ R D
Sbjct: 310 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--ALRLDGLIISNTTISRPSPADT 367
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E GGLSG+PL + ST ++ EMY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 368 HPLAQEAGGLSGKPLFDLSTNVLREMYILTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQ 427
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT+F Y GP L+ RIK+EL E L+++G+ SV +AVGA K
Sbjct: 428 LYTAFAYGGPALIPRIKAELAECLERDGFKSVQEAVGADFK 468
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V R+ Q A PP+
Sbjct: 265 YVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQAARDEMQWAEDGPPPL 324
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 325 LVKIAPDLSKQDLEDIAAVAL 345
>gi|255089004|ref|XP_002506424.1| dihydropryrimidine dehydrogenase [Micromonas sp. RCC299]
gi|226521696|gb|ACO67682.1| dihydropryrimidine dehydrogenase [Micromonas sp. RCC299]
Length = 488
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 147/215 (68%), Gaps = 13/215 (6%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL---- 179
D G+ G A Y VVN+SSPNT LR LQ K LK LL+ V+ R++ A+K
Sbjct: 272 DYALGVRALGHTADYIVVNISSPNTPGLRALQGKAHLKGLLRKVLAARDESALKSRTGGG 331
Query: 180 ------PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE-E 232
PP+L+KIAPDL+ + KD+ V + C VDG+IVSNTT+ R E + A + E
Sbjct: 332 QTHAHKPPVLLKIAPDLTDGDIKDV--VAAATSCAVDGIIVSNTTIARPEDVAAHARGGE 389
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG+PL + STE++ +Y+LT GK+P++G GGV SG+DA+EKI+AGASLVQ+YT+F
Sbjct: 390 AGGLSGKPLMDPSTEVLFRVYQLTGGKIPLVGCGGVASGRDAYEKIRAGASLVQMYTAFA 449
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y GP LV +K+EL L+++GY SV++A+GAAH+
Sbjct: 450 YAGPALVPAMKAELAACLREDGYESVAEAIGAAHR 484
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----- 99
+ LG+ G A Y VVN+SSPNT LR LQ K LK LL+ V+ R++ ALK
Sbjct: 273 YALGVRALGHTADYIVVNISSPNTPGLRALQGKAHLKGLLRKVLAARDESALKSRTGGGQ 332
Query: 100 -----PPILVKIAPDLSLDEKKD-IADVVLDSVKGIL 130
PP+L+KIAPDL+ + KD +A +V GI+
Sbjct: 333 THAHKPPVLLKIAPDLTDGDIKDVVAAATSCAVDGII 369
>gi|449435710|ref|XP_004135637.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Cucumis sativus]
gi|449485753|ref|XP_004157265.1| PREDICTED: LOW QUALITY PROTEIN: dihydroorotate dehydrogenase
(quinone), mitochondrial-like [Cucumis sativus]
Length = 455
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 151/218 (69%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ D D V+G+ A Y V+NVSSPNT LR LQ + QLK L++ V E
Sbjct: 237 VNLGKNKNSEDASADYVQGVHTLSQYADYLVINVSSPNTPGLRVLQGRKQLKDLVRKVQE 296
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI++NTTV R E D
Sbjct: 297 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--ALRLDGLIITNTTVSRPEPADN 354
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E GGLSG+PL N ST ++ EMY LT+GK+P++G GG+ SG+DA++KI+AGASLVQ
Sbjct: 355 NPLAAEAGGLSGKPLFNLSTNILKEMYILTRGKIPLVGCGGISSGEDAYKKIRAGASLVQ 414
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+F Y GP L+ +IK EL E L+++G+ S+ +AVGA
Sbjct: 415 LYTAFAYGGPALIPQIKGELAECLERDGFKSIQEAVGA 452
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LR LQ + QLK L++ V E R+ Q + PP+
Sbjct: 252 YVQGVHTLSQYADYLVINVSSPNTPGLRVLQGRKQLKDLVRKVQEARDEMQWGEEGPPPL 311
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 312 LVKIAPDLSKEDLEDIAAVAL 332
>gi|296085267|emb|CBI28999.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LRKLQ + QLK L+K V
Sbjct: 224 VNLGKNKTSEDAAADYVQGVHSLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQG 283
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI+SNTT+ R + +
Sbjct: 284 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVSL--ALRLDGLIISNTTISRPDSVRQ 341
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
EE+GGLSG+PL N ST ++ EMY LT+G++P+IG GG+ SG+DA++KI+AGA+LVQ
Sbjct: 342 NPVAEESGGLSGKPLFNLSTNMLKEMYVLTRGRIPLIGCGGISSGEDAYKKIRAGATLVQ 401
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT F Y GP L+ +IK+EL E L+++G+ S+ +AVGA
Sbjct: 402 LYTQFAYEGPALIPQIKAELAEYLERDGFKSIHEAVGA 439
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V R+ Q + PP+
Sbjct: 239 YVQGVHSLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQGARDEMQWGEEGPPPL 298
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 299 LVKIAPDLSKEDLEDIAAVSL 319
>gi|225462557|ref|XP_002267743.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Vitis vinifera]
Length = 460
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LRKLQ + QLK L+K V
Sbjct: 242 VNLGKNKTSEDAAADYVQGVHSLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQG 301
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI+SNTT+ R + +
Sbjct: 302 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVSL--ALRLDGLIISNTTISRPDSVRQ 359
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
EE+GGLSG+PL N ST ++ EMY LT+G++P+IG GG+ SG+DA++KI+AGA+LVQ
Sbjct: 360 NPVAEESGGLSGKPLFNLSTNMLKEMYVLTRGRIPLIGCGGISSGEDAYKKIRAGATLVQ 419
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT F Y GP L+ +IK+EL E L+++G+ S+ +AVGA
Sbjct: 420 LYTQFAYEGPALIPQIKAELAEYLERDGFKSIHEAVGA 457
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V R+ Q + PP+
Sbjct: 257 YVQGVHSLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQGARDEMQWGEEGPPPL 316
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 317 LVKIAPDLSKEDLEDIAAVSL 337
>gi|157228|gb|AAB59185.1| dihydroorotate dehydrogenase [Drosophila melanogaster]
Length = 389
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 140/195 (71%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K + D V+G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +
Sbjct: 183 VNLGRNKTTMSPIADYVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVND 242
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T++ L PIL+K++PDLSLD+ KDI V+ K +VDGLIVSNTTV R +
Sbjct: 243 TKSSLDKNKNVPILLKLSPDLSLDDMKDIVWVIKRKKSRVDGLIVSNTTVSRENIEKNKL 302
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EETGGLSG PL+ +STE+I++MY+LT GK+PIIGVGGV SG DA+EKI+AGAS VQIYT
Sbjct: 303 AEETGGLSGPPLKARSTEMIAQMYQLTDGKIPIIGVGGVASGYDAYEKIEAGASYVQIYT 362
Query: 290 SFVYHGPPLVTRIKS 304
+ VY GP LV IK+
Sbjct: 363 ALVYEGPALVEDIKA 377
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ FG VA Y V+NVSSPNT LR +Q+K++L+ LL+ V +T++ L PIL+
Sbjct: 198 YVQGVRVFGPVADYLVINVSSPNTKGLRDMQSKEKLRELLEQVNDTKSSLDKNKNVPILL 257
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDLSLD+ KDI V+
Sbjct: 258 KLSPDLSLDDMKDIVWVI 275
>gi|224064621|ref|XP_002193429.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Taeniopygia guttata]
Length = 436
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 148/220 (67%), Gaps = 4/220 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVV--NVSSPNTANLRKLQAKDQLKHLLKTV 167
++L + K+ D D V G+ G +A + VS P+T L+ L H+ V
Sbjct: 213 VNLGKNKNSTDAAADYVAGVRTLGPLADLLLAPARVSEPSTPQLQALPLPAMHCHVHLQV 272
Query: 168 VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
+ R+ L K P +LVKIAPDL+ +K+DIA VV + VDGLIVSNTTV R L +
Sbjct: 273 LVERDLLPCKHKPAVLVKIAPDLTAQDKQDIASVVCE--LGVDGLIVSNTTVSRPSSLRS 330
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R + E GGLSG+PLR ST+ I EMY LT+G++PIIGVGGV SG+DA EKI+AGASLVQ+
Sbjct: 331 RQRTEPGGLSGKPLRELSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL 390
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
YT+ VYHGPP+V +K ELEELL+++G+ +V +AVGA H+
Sbjct: 391 YTALVYHGPPVVGAVKRELEELLREQGFKNVMEAVGADHR 430
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVV--NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI 102
++ G+ G +A + VS P+T L+ L H+ V+ R+ L K P +
Sbjct: 228 YVAGVRTLGPLADLLLAPARVSEPSTPQLQALPLPAMHCHVHLQVLVERDLLPCKHKPAV 287
Query: 103 LVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
LVKIAPDL+ +K+DIA VV + V G++
Sbjct: 288 LVKIAPDLTAQDKQDIASVVCELGVDGLI 316
>gi|413919953|gb|AFW59885.1| dihydroorotate dehydrogenase [Zea mays]
Length = 548
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+N+SSPNT LRKLQ + QLK L+K V
Sbjct: 330 VNLGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLKDLVKKVQA 389
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTTV R D
Sbjct: 390 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--ALRLDGLIISNTTVSRPSPADK 447
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ETGGLSG+PL + ST ++ +MY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 448 HPLAQETGGLSGKPLLDLSTNILRDMYMLTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQ 507
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+ Y GP L+ RIK+EL E L+++G+ SV +AVGA
Sbjct: 508 LYTALAYGGPALIPRIKAELAECLERDGFKSVQEAVGA 545
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+N+SSPNT LRKLQ + QLK L+K V R+ Q A PP+
Sbjct: 345 YVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLKDLVKKVQAARDEMQWAEDGPPPL 404
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 405 LVKIAPDLSKQDLEDIAAVAL 425
>gi|226509288|ref|NP_001152058.1| dihydroorotate dehydrogenase [Zea mays]
gi|195652215|gb|ACG45575.1| dihydroorotate dehydrogenase [Zea mays]
Length = 469
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+N+SSPNT LRKLQ + QLK L+K V
Sbjct: 251 VNLGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLKDLVKKVQA 310
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTTV R D
Sbjct: 311 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--ALRLDGLIISNTTVSRPSPADK 368
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ETGGLSG+PL + ST ++ +MY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 369 HPLAQETGGLSGKPLLDLSTNILRDMYMLTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQ 428
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+ Y GP L+ RIK+EL E L+++G+ SV +AVGA
Sbjct: 429 LYTALAYGGPALIPRIKAELAECLERDGFKSVQEAVGA 466
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+N+SSPNT LRKLQ + QLK L+K V R+ Q A PP+
Sbjct: 266 YVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLKDLVKKVQAARDEMQWAEDGPPPL 325
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 326 LVKIAPDLSKQDLEDIAAVAL 346
>gi|302769880|ref|XP_002968359.1| hypothetical protein SELMODRAFT_440247 [Selaginella moellendorffii]
gi|300164003|gb|EFJ30613.1| hypothetical protein SELMODRAFT_440247 [Selaginella moellendorffii]
Length = 464
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 164/259 (63%), Gaps = 13/259 (5%)
Query: 75 QAKDQLKHLLKTVVETRNQ---LALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILK 131
K ++ + + + T + L K P IL ++L + K D D V+G+
Sbjct: 213 HGKRRMAETVNSAITTNTEQRVLGGKAGPGIL-----GVNLGKNKTSEDAAADYVQGVHT 267
Query: 132 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLAVKPLPPILVKIAPD 189
A Y V+NVSSPNT LRKLQ + QLK L+K V+ R+ Q + PP+LVKIAPD
Sbjct: 268 LSQYADYLVINVSSPNTPGLRKLQGRKQLKDLIKKVLAARDEMQWGEEGPPPLLVKIAPD 327
Query: 190 LSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLDARYKEETGGLSGEPLRNKSTEL 248
LS + DIA V L ++DGLI++NTTV R + + + +E GGLSG+PL STE+
Sbjct: 328 LSKQDLADIAAVALS--LRLDGLIIANTTVSRPDSVIGLVHADEMGGLSGKPLFTLSTEV 385
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
+ EMY+LT GK+P++G GG+ SG++A+ KI+AGA+LVQ+YT+F Y GP L+ RIK+EL
Sbjct: 386 LREMYQLTWGKIPLVGCGGISSGEEAYVKIRAGATLVQLYTTFAYEGPALIPRIKAELAA 445
Query: 309 LLQKEGYNSVSQAVGAAHK 327
L+++G+ S +A+GA H+
Sbjct: 446 CLERDGFKSAQEAIGADHR 464
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V+ R+ Q + PP+
Sbjct: 261 YVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLIKKVLAARDEMQWGEEGPPPL 320
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
LVKIAPDLS + DIA V L
Sbjct: 321 LVKIAPDLSKQDLADIAAVALS 342
>gi|452824632|gb|EME31633.1| dihydroorotate oxidase [Galdieria sulphuraria]
Length = 399
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 154/219 (70%), Gaps = 7/219 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + KD D LD KG++ F D+A Y V+N+SSPNT +LR LQ K+QL LL+ V+
Sbjct: 169 VNLGKNKDTEDAKLDYEKGVVAFADIADYLVINISSPNTPSLRNLQQKNQLADLLEHVIA 228
Query: 170 TRN----QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEY 224
R+ +L+ K PPILVKI+PDL+ +E DI + + VDG+++SNTT+ R +
Sbjct: 229 IRDATLKELSPKGRPPILVKISPDLTDEELADIVTTCM--RLSVDGIVISNTTIQRPHGL 286
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L+ + + GGLSG PL+N ST +I ++Y++T G+L I+GVGGV S +DA++KI+AGASL
Sbjct: 287 LEQQVAMQEGGLSGPPLKNISTSIIQKVYRMTNGRLVIVGVGGVSSAEDAYDKIRAGASL 346
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+++YT+ Y GP L+ +IK L ELLQ++G+ SV +A+G
Sbjct: 347 IELYTALAYEGPALIRKIKIGLSELLQRDGFQSVQEAIG 385
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN----QLALKPLPPIL 103
G++ F D+A Y V+N+SSPNT +LR LQ K+QL LL+ V+ R+ +L+ K PPIL
Sbjct: 187 GVVAFADIADYLVINISSPNTPSLRNLQQKNQLADLLEHVIAIRDATLKELSPKGRPPIL 246
Query: 104 VKIAPDLSLDEKKDIADVVLD-SVKGIL 130
VKI+PDL+ +E DI + SV GI+
Sbjct: 247 VKISPDLTDEELADIVTTCMRLSVDGIV 274
>gi|255571661|ref|XP_002526775.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
gi|223533878|gb|EEF35606.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
Length = 454
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 156/222 (70%), Gaps = 7/222 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LR LQ + QLK L+K V
Sbjct: 236 VNLGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQA 295
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS ++ +DIA V L ++DGLI++NTT+ R + L
Sbjct: 296 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--ALRLDGLIITNTTISRPD-LVR 352
Query: 228 RY--KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+Y EE+GGLSG+PL + ST+++ EMY LT+GK+P+IG GG+ SG+DA+ KI+AGA+LV
Sbjct: 353 KYPVAEESGGLSGKPLFDLSTDILKEMYILTRGKIPLIGCGGISSGEDAYRKIRAGATLV 412
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
QIYT+F Y GP L+ +IK+EL E L+++G+ S+ +AVGA ++
Sbjct: 413 QIYTAFAYGGPALIPQIKTELAECLERDGFKSILEAVGADYR 454
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LR LQ + QLK L+K V R+ Q + PP+
Sbjct: 251 YVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 310
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 311 LVKIAPDLSKEDLEDIAAVAL 331
>gi|18420660|ref|NP_568428.1| dihydroorotate dehydrogenase [Arabidopsis thaliana]
gi|26454657|sp|P32746.2|PYRD_ARATH RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|24753785|gb|AAN64025.1|AF454729_1 dihydroorotate dehydrogenase [Arabidopsis thaliana]
gi|110736302|dbj|BAF00121.1| dihydroorotate dehydrogenase [Arabidopsis thaliana]
gi|111074516|gb|ABH04631.1| At5g23300 [Arabidopsis thaliana]
gi|332005766|gb|AED93149.1| dihydroorotate dehydrogenase [Arabidopsis thaliana]
Length = 460
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 149/221 (67%), Gaps = 5/221 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNTA LR LQ + QLK L+K V
Sbjct: 242 VNLGKNKTSEDAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQA 301
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS E +DIA V L +DGLI+SNTTV R + +
Sbjct: 302 ARDEMQWGDEGPPPLLVKIAPDLSRGELEDIAAVAL--ALHLDGLIISNTTVSRPDAVSN 359
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL ST ++ +MY LT+GK+P+IG GGV SG+DA++KI+AGA+LVQ
Sbjct: 360 NPVATETGGLSGKPLFALSTNMLRDMYTLTRGKIPLIGCGGVSSGEDAYKKIRAGATLVQ 419
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT F Y GP L+ +IK EL + L+++G+ S+ +A+GA H+
Sbjct: 420 LYTGFAYGGPALIPQIKEELVKCLERDGFKSIHEAIGADHR 460
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPI 102
++ G+ A Y V+NVSSPNTA LR LQ + QLK L+K V R+++ + PP+
Sbjct: 257 YVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQAARDEMQWGDEGPPPL 316
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS E +DIA V L
Sbjct: 317 LVKIAPDLSRGELEDIAAVAL 337
>gi|384246193|gb|EIE19684.1| dihydropryrimidine dehydrogenase [Coccomyxa subellipsoidea C-169]
Length = 365
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/245 (51%), Positives = 162/245 (66%), Gaps = 17/245 (6%)
Query: 91 RNQL---ALKPLP-PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSP 146
R+QL A +P P P LV + +L + K D D G+ K A Y V+NVSSP
Sbjct: 124 RSQLHRPANQPGPGPGLVGV----NLGKNKLSEDAAADYCLGVSKLAPYADYLVINVSSP 179
Query: 147 NTANLRKLQAKDQLKHLLKTVVETRNQL---AVKPLPPILVKIAPDLSLDEKKDIADVVL 203
NT LR LQ++ +L+ L++ V TR+ + A P PP+LVKIAPD++ +K DIA V L
Sbjct: 180 NTPGLRALQSRKELEKLVRKVKATRDGMSWGAAGP-PPLLVKIAPDITDADKSDIAAVAL 238
Query: 204 DSKCKVDGLIVSNTTVDRYEYLDARYKE--ETGGLSGEPLRNKSTELISEMYKLTKGKLP 261
K +DGLIVSNTT+ R + A + E E GGLSG PLR STE++ +MY+LTKGKLP
Sbjct: 239 --KLGIDGLIVSNTTICRPPAV-AEHPEGKEAGGLSGAPLRFMSTEVLRDMYRLTKGKLP 295
Query: 262 IIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQA 321
IIGVGGV SG DA+ KI+AGASLV++YT VY GP L+ R+K EL LLQ++G+ SV A
Sbjct: 296 IIGVGGVSSGADAYAKIRAGASLVELYTGLVYEGPILLRRMKLELTALLQRDGFASVHDA 355
Query: 322 VGAAH 326
+GA H
Sbjct: 356 IGADH 360
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL---ALKPLPP 101
+ LG+ K A Y V+NVSSPNT LR LQ++ +L+ L++ V TR+ + A P PP
Sbjct: 158 YCLGVSKLAPYADYLVINVSSPNTPGLRALQSRKELEKLVRKVKATRDGMSWGAAGP-PP 216
Query: 102 ILVKIAPDLSLDEKKDIADVVL 123
+LVKIAPD++ +K DIA V L
Sbjct: 217 LLVKIAPDITDADKSDIAAVAL 238
>gi|427426940|ref|ZP_18916985.1| Dihydroorotate dehydrogenase [Caenispirillum salinarum AK4]
gi|425883641|gb|EKV32316.1| Dihydroorotate dehydrogenase [Caenispirillum salinarum AK4]
Length = 362
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 147/217 (67%), Gaps = 5/217 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ D D + I +A + +NVSSPNT LR LQ ++ L L++
Sbjct: 140 VNLGRNKETDDPAEDYARLIGTLAPLADFLTLNVSSPNTPGLRALQGREPLIDLIR---R 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + + PP+L+KIAPDL+ +++ DIA VV + +DGLIVSNTT+ R E L + +
Sbjct: 197 ARAAMPAEKAPPLLLKIAPDLTAEDESDIAAVV--TAEAIDGLIVSNTTIARPESLRSGH 254
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG PL ST L+ MYK T G++P++GVGG+ SG+DA+ KI+AGASLVQ+YT
Sbjct: 255 KAETGGLSGRPLFEPSTALLGRMYKATGGRIPLVGVGGIASGRDAYAKIRAGASLVQLYT 314
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+F+Y GPPL+ IK+EL + L+++G+ SV+ AVGA H
Sbjct: 315 AFIYGGPPLIPAIKAELADCLKRDGFASVADAVGADH 351
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 46 LLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVK 105
L+G L +A + +NVSSPNT LR LQ ++ L L++ R + + PP+L+K
Sbjct: 158 LIGTLA--PLADFLTLNVSSPNTPGLRALQGREPLIDLIR---RARAAMPAEKAPPLLLK 212
Query: 106 IAPDLSLDEKKDIADVV-LDSVKGIL 130
IAPDL+ +++ DIA VV +++ G++
Sbjct: 213 IAPDLTAEDESDIAAVVTAEAIDGLI 238
>gi|402849667|ref|ZP_10897894.1| Dihydroorotate dehydrogenase [Rhodovulum sp. PH10]
gi|402500057|gb|EJW11742.1| Dihydroorotate dehydrogenase [Rhodovulum sp. PH10]
Length = 360
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 148/218 (67%), Gaps = 4/218 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ + ++ AD V D V GI A Y VVNVSSPNT LR LQA++ ++ LLK +
Sbjct: 143 NVGKNRNAADAVADYVTGITAVTPHADYLVVNVSSPNTPGLRGLQAREPIETLLKATLAA 202
Query: 171 RNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R A + PP+LVK+APDL DE +DIA+VV+ + VDG++V NTT+ R L ++
Sbjct: 203 RAGAVPAGRRAPPLLVKVAPDLDEDELRDIAEVVIATG--VDGIVVGNTTISRPSTLKSK 260
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+++ GGLSG PL STE + MY+ T+GK+PI+G GG+ SG+DA+ KI+AGASLVQ+Y
Sbjct: 261 WRDAEGGLSGRPLMRLSTECLRAMYRATEGKVPIVGCGGISSGEDAYAKIRAGASLVQLY 320
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
++ V+HGP +K +L +LL ++G+ SV+ AVGA H
Sbjct: 321 SALVFHGPGFAETVKRDLAKLLHRDGFASVAAAVGADH 358
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPI 102
++ GI A Y VVNVSSPNT LR LQA++ ++ LLK + R A + PP+
Sbjct: 157 YVTGITAVTPHADYLVVNVSSPNTPGLRGLQAREPIETLLKATLAARAGAVPAGRRAPPL 216
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
LVK+APDL DE +DIA+VV+ + V GI+
Sbjct: 217 LVKVAPDLDEDELRDIAEVVIATGVDGIV 245
>gi|407771924|ref|ZP_11119269.1| dihydroorotate dehydrogenase 2 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285092|gb|EKF10603.1| dihydroorotate dehydrogenase 2 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 416
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 151/215 (70%), Gaps = 4/215 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + K D D VKG+ G A Y VVNVSSPNT LR LQ + L+ LL +V++
Sbjct: 140 NLGKNKYSEDAAADYVKGVAALGPYADYLVVNVSSPNTPGLRALQGRGPLEALLTSVLKA 199
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R+ A P+L+K+APDL+ ++K DIA V L K ++DG+IVSNTT+DR L++ +
Sbjct: 200 RDSHAKGV--PVLLKVAPDLTEEDKADIAAVAL--KLRLDGMIVSNTTIDRPVGLNSYDQ 255
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+E GGLSG PL ST+++++ Y+LT GK+P+IGVGG+ SGKDA+EKI GASLVQ+Y++
Sbjct: 256 DEKGGLSGPPLMEPSTKVLADFYRLTGGKIPLIGVGGIASGKDAYEKILNGASLVQLYSA 315
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
VYHG LVT IK +L L+K+G+ SV+ AVGAA
Sbjct: 316 LVYHGLELVTEIKEDLARRLRKDGFASVADAVGAA 350
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G A Y VVNVSSPNT LR LQ + L+ LL +V++ R+ A P+L+
Sbjct: 154 YVKGVAALGPYADYLVVNVSSPNTPGLRALQGRGPLEALLTSVLKARDSHAKG--VPVLL 211
Query: 105 KIAPDLSLDEKKDIADVVL 123
K+APDL+ ++K DIA V L
Sbjct: 212 KVAPDLTEEDKADIAAVAL 230
>gi|302765024|ref|XP_002965933.1| hypothetical protein SELMODRAFT_84627 [Selaginella moellendorffii]
gi|300166747|gb|EFJ33353.1| hypothetical protein SELMODRAFT_84627 [Selaginella moellendorffii]
Length = 412
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 169/271 (62%), Gaps = 11/271 (4%)
Query: 60 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIA 119
+V V+ A K + + + + T E R L K P IL ++L + K
Sbjct: 150 IVAVAKRLGAQHGKRRMAETVNSAITTNAEQR-VLGGKAGPGIL-----GVNLGKNKTSE 203
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLAVK 177
D D V+G+ A Y V+NVSSPNT LRKLQ + QLK L+K V+ R+ Q +
Sbjct: 204 DAAADYVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLIKKVLAARDEMQWGEE 263
Query: 178 PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLDARYKEETGGL 236
PP+LVKIAPDLS + DIA V L ++DGLI++NTTV R + + + +E GGL
Sbjct: 264 GPPPLLVKIAPDLSKQDLADIAAVALS--LRLDGLIIANTTVSRPDSVIGLVHVDEMGGL 321
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG+PL STE++ EMY+LT GK+P++G GG+ SG++A+ KI+AGA+LVQ+YT+F Y GP
Sbjct: 322 SGKPLFTLSTEVLREMYQLTWGKIPLVGCGGISSGEEAYVKIRAGATLVQLYTTFAYEGP 381
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
L+ RIK+EL L+++G+ S +A+GA H+
Sbjct: 382 ALIPRIKAELAACLERDGFKSAQEAIGADHR 412
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V+ R+ Q + PP+
Sbjct: 209 YVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLIKKVLAARDEMQWGEEGPPPL 268
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + DIA V L
Sbjct: 269 LVKIAPDLSKQDLADIAAVAL 289
>gi|242074764|ref|XP_002447318.1| hypothetical protein SORBIDRAFT_06g032850 [Sorghum bicolor]
gi|241938501|gb|EES11646.1| hypothetical protein SORBIDRAFT_06g032850 [Sorghum bicolor]
Length = 470
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 149/218 (68%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+N+SSPNT LRKLQ + QLK ++K V
Sbjct: 252 VNLGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLKDIVKKVQA 311
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTTV R D
Sbjct: 312 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--ALRLDGLIISNTTVSRPPPADK 369
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E GGLSG+PL + ST ++ EMY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 370 DPLAQEIGGLSGKPLFDLSTNILREMYMLTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQ 429
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+ Y GP L+ RIK+EL E L+++G+ SV +AVGA
Sbjct: 430 LYTALAYGGPALIPRIKTELAECLERDGFKSVQEAVGA 467
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+N+SSPNT LRKLQ + QLK ++K V R+ Q A PP+
Sbjct: 267 YVQGVHTLSQYADYLVINISSPNTPGLRKLQGRKQLKDIVKKVQAARDEMQWAEDGPPPL 326
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 327 LVKIAPDLSKQDLEDIAAVAL 347
>gi|145352825|ref|XP_001420736.1| dihydroorotate dehydrogenase [Ostreococcus lucimarinus CCE9901]
gi|144580971|gb|ABO99029.1| dihydroorotate dehydrogenase [Ostreococcus lucimarinus CCE9901]
Length = 384
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 143/205 (69%), Gaps = 3/205 (1%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D V G+ G+ Y VVN+SSPNT LR LQ + L LL+ V++ R++ P+L
Sbjct: 181 DYVLGVENIGEFGDYIVVNISSPNTPGLRNLQGRKHLSGLLRKVLDARDKNPGTAKTPVL 240
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR-YKEETGGLSGEPLR 242
VKIAPDL+ +DIA VV K VDG+IVSNTT+ R + + A + +E GGLSG+PL
Sbjct: 241 VKIAPDLTDAALRDIASVVKSEK--VDGVIVSNTTIARPDAIKAHAHGDEAGGLSGKPLM 298
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
ST+++ ++YKLT GK+ ++G GG+ SG+DA+ KI+AGASLVQ+YT+F + GPPL+ RI
Sbjct: 299 EPSTKVLHDLYKLTGGKITLVGCGGIASGEDAYAKIRAGASLVQLYTAFAFEGPPLIPRI 358
Query: 303 KSELEELLQKEGYNSVSQAVGAAHK 327
K ELEE L ++G+ SV A+GAAH+
Sbjct: 359 KRELEECLARDGFKSVQDAIGAAHR 383
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++LG+ G+ Y VVN+SSPNT LR LQ + L LL+ V++ R++ P+LV
Sbjct: 182 YVLGVENIGEFGDYIVVNISSPNTPGLRNLQGRKHLSGLLRKVLDARDKNPGTAKTPVLV 241
Query: 105 KIAPDLSLDEKKDIADVV-LDSVKGIL 130
KIAPDL+ +DIA VV + V G++
Sbjct: 242 KIAPDLTDAALRDIASVVKSEKVDGVI 268
>gi|303288199|ref|XP_003063388.1| dihydropryrimidine dehydrogenase [Micromonas pusilla CCMP1545]
gi|226455220|gb|EEH52524.1| dihydropryrimidine dehydrogenase [Micromonas pusilla CCMP1545]
Length = 375
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 143/211 (67%), Gaps = 6/211 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V D V+G+ G A Y VVNVSSPNT LR LQ+K L LL V+ R+ L
Sbjct: 147 DAVEDYVEGVRALGRRADYLVVNVSSPNTPGLRNLQSKRHLTRLLTRVLRARDALPDGHR 206
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLDARY---KEETGG 235
PP+L+KIAPDL+ D+ K IA L ++ VDG++VSNTTV R + D Y ++E GG
Sbjct: 207 PPVLLKIAPDLTEDDVKQIAAAALSTR--VDGVVVSNTTVARPDDVFDGEYAHLRDEAGG 264
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL STE++ E+Y T+GK+ ++G GGV G+DA+EKI+AGASLVQ+YT+F Y G
Sbjct: 265 LSGAPLFESSTEVLRELYARTRGKVTLVGCGGVSDGEDAYEKIRAGASLVQLYTAFAYEG 324
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
P +V R+K EL+ L+++GY+ + +AVGA H
Sbjct: 325 PAIVPRLKEELKACLERDGYDFIEEAVGADH 355
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP 100
++ ++ G+ G A Y VVNVSSPNT LR LQ+K L LL V+ R+ L P
Sbjct: 148 AVEDYVEGVRALGRRADYLVVNVSSPNTPGLRNLQSKRHLTRLLTRVLRARDALPDGHRP 207
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
P+L+KIAPDL+ D+ K IA L + V G++
Sbjct: 208 PVLLKIAPDLTEDDVKQIAAAALSTRVDGVV 238
>gi|357162637|ref|XP_003579473.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Brachypodium distachyon]
Length = 566
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 147/218 (67%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+N+SSPNT LRKLQ + QLK L+K V
Sbjct: 348 VNLGKNKTSEDAAADYVQGVHSLSQYADYLVINISSPNTPGLRKLQGRQQLKDLVKKVQA 407
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTT+ R D
Sbjct: 408 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--TLRLDGLIISNTTISRPPPADT 465
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E GGLSG+PL + S ++ EMY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 466 HPLAQEAGGLSGKPLFDLSNHVLREMYMLTRGKVPLIGCGGVSSGEDAYKKIRSGATLVQ 525
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+ Y GP L+ RIK+EL E L+++G+ SV AVGA
Sbjct: 526 LYTALAYGGPALIPRIKAELAECLERDGFKSVQAAVGA 563
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+N+SSPNT LRKLQ + QLK L+K V R+ Q A PP+
Sbjct: 363 YVQGVHSLSQYADYLVINISSPNTPGLRKLQGRQQLKDLVKKVQAARDEMQWAEDGPPPL 422
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 423 LVKIAPDLSKQDLEDIAAVAL 443
>gi|297812479|ref|XP_002874123.1| hypothetical protein ARALYDRAFT_910342 [Arabidopsis lyrata subsp.
lyrata]
gi|297319960|gb|EFH50382.1| hypothetical protein ARALYDRAFT_910342 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 148/221 (66%), Gaps = 5/221 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNTA LR LQ + QLK L+K V
Sbjct: 242 VNLGKNKTSEDAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQA 301
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-D 226
R+ Q + PP+LVKIAPDLS E +DIA V L +DGLI+SNTTV R + + +
Sbjct: 302 ARDEMQWGDEGPPPLLVKIAPDLSRGELEDIAAVAL--ALHLDGLIISNTTVSRPDPVSN 359
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E GGLSG PL ST ++ +MY LT+GK+P+IG GGV SG+DA++KI+AGA+LVQ
Sbjct: 360 NPVATEAGGLSGTPLFPLSTNMLRDMYTLTRGKIPLIGCGGVSSGEDAYKKIRAGATLVQ 419
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT F Y GP L+ +IK EL + L+++G+ S+ +A+GA H+
Sbjct: 420 LYTGFAYGGPALIPQIKEELVKCLERDGFKSIHEAIGADHR 460
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPI 102
++ G+ A Y V+NVSSPNTA LR LQ + QLK L+K V R+++ + PP+
Sbjct: 257 YVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQAARDEMQWGDEGPPPL 316
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS E +DIA V L
Sbjct: 317 LVKIAPDLSRGELEDIAAVAL 337
>gi|345800918|ref|XP_853399.2| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial
[Canis lupus familiaris]
Length = 395
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 152/218 (69%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D +G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++
Sbjct: 179 INLGKNKTSVDAAADYTEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLAKVLQ 238
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L P +LVKIAPDL+ +K+DIA VV + +DGLI++NTTV R L
Sbjct: 239 ERDALQGAHKPAVLVKIAPDLTAQDKEDIASVV--KELGIDGLIITNTTVSRPASLQGAL 296
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+PLR+ ST+ I EMY LT+G +PIIGVGGV SG+DA EKI+AGASLVQ+YT
Sbjct: 297 RSEIGGLSGKPLRDLSTQTIREMYALTQGGVPIIGVGGVSSGQDALEKIRAGASLVQLYT 356
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y GPP+V IK ELE LL+++G+ ++ A+GA H+
Sbjct: 357 ALTYRGPPVVGMIKRELEALLKEQGFTRITDAIGADHR 394
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLAKVLQERDALQGAHKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|161788888|dbj|BAF95081.1| dihydroorotate dehydrogenase [Diplonema papillatum]
Length = 395
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D KGI K G A Y V+NVSSPNT LR LQ KD L+ LLK VV RN+L +P P+L
Sbjct: 184 DYSKGIRKLGSKADYIVINVSSPNTPGLRNLQKKDLLQALLKKVVTVRNELGHRP--PLL 241
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
VK+APDL E KD+A+ L VDG+IVSNTT+ R E L + K GGLSG PLR
Sbjct: 242 VKVAPDLDAQELKDVAEASL--AAAVDGIIVSNTTIARPETLRSENKAMQGGLSGRPLRA 299
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
++T+ + +M T KLPI+GVGG+ +G+DAF+KI GASLVQ+Y+ + GP + R+
Sbjct: 300 RATKAVHDMSLATDQKLPIVGVGGIANGQDAFDKIVVGASLVQLYSMMAFEGPSIGHRVN 359
Query: 304 SELEELLQKEGYNSVSQAVGAAHKS 328
+EL +LL+ G+ SV +AVGAAH++
Sbjct: 360 TELADLLRLHGFKSVKEAVGAAHRN 384
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 28/183 (15%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
GI K G A Y V+NVSSPNT LR LQ KD L+ LLK VV RN+L + PP+LVK+A
Sbjct: 188 GIRKLGSKADYIVINVSSPNTPGLRNLQKKDLLQALLKKVVTVRNELGHR--PPLLVKVA 245
Query: 108 PDLSLDEKKDIADVVL-DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKT 166
PDL E KD+A+ L +V GI+ VS+ A L+++++
Sbjct: 246 PDLDAQELKDVAEASLAAAVDGII------------VSNTTIARPETLRSENK------- 286
Query: 167 VVETRNQLAVKPLPPILVKIAPDLSL--DEKKDIADV--VLDSKCKVDGLIVSNTTVDRY 222
+ L+ +PL K D+SL D+K I V + + + D ++V + V Y
Sbjct: 287 --AMQGGLSGRPLRARATKAVHDMSLATDQKLPIVGVGGIANGQDAFDKIVVGASLVQLY 344
Query: 223 EYL 225
+
Sbjct: 345 SMM 347
>gi|301771169|ref|XP_002921002.1| PREDICTED: dihydroorotate dehydrogenase, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 395
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 164/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ E + +L + LP + S+D D A+ G+ G +A Y
Sbjct: 156 VEHRLRARREKQARLTEEGLPLGINLGKNKTSVDAAADYAE-------GVRVLGPLADYL 208
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 209 VVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQGARKPAVLVKIAPDLTAQDKEDIA 268
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLI++NTTV R L + E GGLSG+PLR+ ST+ I EMY LTKG
Sbjct: 269 SVV--RELGIDGLIITNTTVSRPASLQGALRSEIGGLSGKPLRDLSTQTIREMYALTKGG 326
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V R+K ELE LL+++G+ ++
Sbjct: 327 VPIIGVGGVSSGQDALEKIRAGASLVQLYTALTYRGPPVVGRVKRELEALLKEQGFTRIT 386
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 387 DAIGADHQ 394
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIA
Sbjct: 197 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQGARKPAVLVKIA 256
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 257 PDLTAQDKEDIASVV 271
>gi|350596914|ref|XP_003361801.2| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Sus scrofa]
Length = 332
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 153/248 (61%), Gaps = 22/248 (8%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ +T+ +L LP ++L + K D D +G+ G +A Y
Sbjct: 106 VEHRLRARQQTQARLTEDGLPL-------GINLGKNKTSVDAASDYAEGVRVLGPLADYL 158
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+ LL V++ R+ L V P +LVKIAPDL+ +K+DIA
Sbjct: 159 VVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIAPDLTAQDKEDIA 218
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + + + ETGGLSG PLR+ ST+ I EMY LT+G
Sbjct: 219 SVVREXXXXXXXXAL---------------RSETGGLSGRPLRDLSTQTIREMYALTQGS 263
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGG+ SG+DA EKI+AGASLVQ+YT+ + GPP+V +K ELE LL+++G+ +V+
Sbjct: 264 VPIIGVGGISSGQDALEKIRAGASLVQLYTALTFRGPPVVGGVKRELEALLKEQGFTTVT 323
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 324 DAIGADHR 331
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+ LL V++ R+ L + P +LVKIA
Sbjct: 147 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDALKVAHKPAVLVKIA 206
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 207 PDLTAQDKEDIASVV 221
>gi|356536427|ref|XP_003536739.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Glycine max]
Length = 455
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 147/218 (67%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LR LQ + QLK L+K V
Sbjct: 237 VNLGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQA 296
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q + PP+LVKIAPDLS ++ +DIA V L +DGLI+SNTT+ R +
Sbjct: 297 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--ALHLDGLIISNTTISRPDPTSK 354
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL N ST ++ EMY LT+G++P+IG GG+ SG+DA++KI+AGA+LVQ
Sbjct: 355 NPLASETGGLSGKPLFNLSTNILKEMYILTRGRIPLIGCGGISSGEDAYKKIRAGATLVQ 414
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+F Y GP L+ +IK+EL L+++G+ S+ AVGA
Sbjct: 415 LYTAFAYGGPALIPQIKAELAACLERDGFKSIVDAVGA 452
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LR LQ + QLK L+K V R+ Q + PP+
Sbjct: 252 YVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 311
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 312 LVKIAPDLSKEDLEDIAAVAL 332
>gi|357444919|ref|XP_003592737.1| Dihydroorotate dehydrogenase [Medicago truncatula]
gi|355481785|gb|AES62988.1| Dihydroorotate dehydrogenase [Medicago truncatula]
Length = 455
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 149/218 (68%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LR LQ + QLK L+K V
Sbjct: 237 VNLGKNKTSEDSAADYVQGVHTLSQFADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQA 296
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-D 226
R+ Q + PP+LVKIAPDLS ++ +DIA V L +DGLI+SNTT+ R + + +
Sbjct: 297 ARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--ALHLDGLIISNTTISRPDPVKN 354
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL N ST ++ EMY LT+G++P+IG GG+ SG+DA++K++AGA+LVQ
Sbjct: 355 NPLASETGGLSGKPLFNLSTNILKEMYILTRGRIPLIGCGGISSGEDAYQKVRAGATLVQ 414
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+F Y GP L+ +IK+EL L+++G+ S+ AVGA
Sbjct: 415 LYTAFAYGGPALIPQIKAELAACLERDGFKSILDAVGA 452
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LR LQ + QLK L+K V R+ Q + PP+
Sbjct: 252 YVQGVHTLSQFADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQWGEEGPPPL 311
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 312 LVKIAPDLSKEDLEDIAAVAL 332
>gi|423608826|ref|ZP_17584717.1| dihydroorotate oxidase [Bacillus cereus VD102]
gi|401236429|gb|EJR42888.1| dihydroorotate oxidase [Bacillus cereus VD102]
Length = 361
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 156/222 (70%), Gaps = 7/222 (3%)
Query: 110 LSLDEKKDIA--DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
++L + KD D LD KG+ YFV+N+SSPNT LR LQ D LK LL ++
Sbjct: 143 INLGKNKDTPNQDANLDYQKGLEALYTHGDYFVINISSPNTEGLRDLQYVDTLKPLLTSI 202
Query: 168 VETRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
+ R++L K PI++KIAPDL+ ++ + + ++L+ KVD +I +NTT+ R L
Sbjct: 203 LTKRDELCKKHSQYRPIVLKIAPDLTPEQLEGVISIILE--VKVDAVIAANTTISRTN-L 259
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
++Y+E++GGLSG+PL ++STE+IS++Y+ T+GKLPIIG GGVF+G+DA+EKIK+GASLV
Sbjct: 260 TSKYQEQSGGLSGKPLNSRSTEIISKIYQQTQGKLPIIGSGGVFTGEDAYEKIKSGASLV 319
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Q+YTS +Y GP + +I E+ LL+K+G +S++ A+G HK
Sbjct: 320 QLYTSMIYRGPSVAKQINQEILNLLEKDGLSSITDAIGLYHK 361
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLDEK 115
YFV+N+SSPNT LR LQ D LK LL +++ R++L K PI++KIAPDL+ ++
Sbjct: 173 YFVINISSPNTEGLRDLQYVDTLKPLLTSILTKRDELCKKHSQYRPIVLKIAPDLTPEQL 232
Query: 116 KDIADVVLD 124
+ + ++L+
Sbjct: 233 EGVISIILE 241
>gi|45504114|dbj|BAD12565.1| dihydroorotate dehydrogenase [Euglena gracilis]
Length = 435
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 145/222 (65%), Gaps = 16/222 (7%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL----- 174
D D KG+ + G A Y V+NVSSPNT LR LQ + + L+K + R+++
Sbjct: 206 DAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDAD 265
Query: 175 --------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ PLP +L+KIAPDL+ +EK+DIA+VV+++K +DGLIVSNTTV R L
Sbjct: 266 GRRAAAGKSAAPLP-LLIKIAPDLTAEEKQDIAEVVMETK--IDGLIVSNTTVSRPASLL 322
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ +K +TGGLSG PLR ST+ I +MY LT+G +PI+GVGGV +G+D EK+KAGASLVQ
Sbjct: 323 SPHKGQTGGLSGAPLREMSTQAIRDMYALTRGTVPIVGVGGVATGEDVLEKLKAGASLVQ 382
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+Y+ VY GP R+K L + L++E + S AVGA H+
Sbjct: 383 MYSMLVYDGPGAPPRVKKGLLQALRREHFGSARSAVGADHRG 424
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 14/91 (15%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL------------- 94
G+ + G A Y V+NVSSPNT LR LQ + + L+K + R+++
Sbjct: 214 GLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDADGRRAAAGK 273
Query: 95 ALKPLPPILVKIAPDLSLDEKKDIADVVLDS 125
+ PL P+L+KIAPDL+ +EK+DIA+VV+++
Sbjct: 274 SAAPL-PLLIKIAPDLTAEEKQDIAEVVMET 303
>gi|355683776|gb|AER97190.1| dihydroorotate dehydrogenase [Mustela putorius furo]
Length = 395
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 164/248 (66%), Gaps = 9/248 (3%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
++H L+ E + +L + LP + S+D D A+ G+ G +A Y
Sbjct: 157 VEHRLRARQEKQARLTEEGLPLGINLGKNKTSVDAAADYAE-------GVRVLGPLADYL 209
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIAPDL+ +K+DIA
Sbjct: 210 VVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQGVRKPAVLVKIAPDLTAQDKEDIA 269
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
VV + +DGLIV+NTTV R L + E GGLSG+PLR+ ST+ I EMY LT+G
Sbjct: 270 SVV--RELGIDGLIVTNTTVSRPASLQGALRAEIGGLSGKPLRDLSTQTIREMYALTQGG 327
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+PIIGVGGV SG+DA EKI+AGASLVQ+YT+ Y GPP+V R+K ELE LL+++G+ ++
Sbjct: 328 VPIIGVGGVSSGQDALEKIRAGASLVQLYTALTYCGPPVVGRVKRELEALLKEQGFTRIT 387
Query: 320 QAVGAAHK 327
A+GA H+
Sbjct: 388 DAIGADHR 395
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ G +A Y VVNVSSPNTA LR LQ K +L+HLL V++ R+ L P +LVKIA
Sbjct: 198 GVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRHLLTKVLQERDALQGVRKPAVLVKIA 257
Query: 108 PDLSLDEKKDIADVV 122
PDL+ +K+DIA VV
Sbjct: 258 PDLTAQDKEDIASVV 272
>gi|449521287|ref|XP_004167661.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Cucumis sativus]
Length = 223
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 139/188 (73%), Gaps = 5/188 (2%)
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLAVKPLPPILVKIAPDLSLDEKKD 197
V+NVSSPNT LR LQ + QLK L++ V E RN Q + PP+LVKIAPDLS ++ +D
Sbjct: 35 VINVSSPNTPGLRALQGRKQLKDLVRKVQEARNEMQWGEEGPPPLLVKIAPDLSKEDLED 94
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLD-ARYKEETGGLSGEPLRNKSTELISEMYKLT 256
IA V L ++DGLI++NTTV R E +D + E GGLSG+PL N ST ++ EMY LT
Sbjct: 95 IAAVAL--ALRLDGLIITNTTVSRPEPVDKSPLAAEAGGLSGKPLFNLSTNVLKEMYALT 152
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+GK+P+IG GG+ SG+DA++KI+AGA+LVQ+YT+F Y GP L+ +IK EL E L+++G+
Sbjct: 153 RGKIPLIGCGGISSGEDAYKKIRAGATLVQLYTAFAYGGPALIPQIKWELAECLERDGFK 212
Query: 317 SVSQAVGA 324
SV +AVGA
Sbjct: 213 SVQEAVGA 220
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 60 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPILVKIAPDLSLDEKKD 117
V+NVSSPNT LR LQ + QLK L++ V E RN Q + PP+LVKIAPDLS ++ +D
Sbjct: 35 VINVSSPNTPGLRALQGRKQLKDLVRKVQEARNEMQWGEEGPPPLLVKIAPDLSKEDLED 94
Query: 118 IADVVL 123
IA V L
Sbjct: 95 IAAVAL 100
>gi|209966130|ref|YP_002299045.1| dihydroorotate oxidase [Rhodospirillum centenum SW]
gi|209959596|gb|ACJ00233.1| dihydroorotate oxidase [Rhodospirillum centenum SW]
Length = 350
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 134/196 (68%), Gaps = 4/196 (2%)
Query: 128 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIA 187
GI + +A Y VVNVSSPNT LR LQ ++ L LL +E R +P P+ +K+A
Sbjct: 158 GIRRLAPLAAYLVVNVSSPNTPGLRALQGREPLAALLGRCLEVRRAAGAEP--PLFLKVA 215
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTE 247
PDL+ ++K DIA V L+S +DGL+VSNTTV R + A +E GGLSG PL ST
Sbjct: 216 PDLTEEDKADIAAVALESG--IDGLVVSNTTVSRPPEIPASLAQEAGGLSGRPLFTPSTR 273
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+++E LT G+LP+IGVGG+ SG DA+ KI+AGAS VQ+YT+ Y GP LV RIK++L
Sbjct: 274 VLAEFRSLTGGRLPLIGVGGIASGADAYAKIRAGASAVQLYTALSYQGPALVRRIKADLA 333
Query: 308 ELLQKEGYNSVSQAVG 323
LL+++G+ SV++AVG
Sbjct: 334 ALLKRDGFASVAEAVG 349
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
GI + +A Y VVNVSSPNT LR LQ ++ L LL +E R + PP+ +K+A
Sbjct: 158 GIRRLAPLAAYLVVNVSSPNTPGLRALQGREPLAALLGRCLEVRRAAGAE--PPLFLKVA 215
Query: 108 PDLSLDEKKDIADVVLDS 125
PDL+ ++K DIA V L+S
Sbjct: 216 PDLTEEDKADIAAVALES 233
>gi|229162092|ref|ZP_04290065.1| Dihydroorotate dehydrogenase [Bacillus cereus R309803]
gi|228621414|gb|EEK78267.1| Dihydroorotate dehydrogenase [Bacillus cereus R309803]
Length = 350
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 155/222 (69%), Gaps = 7/222 (3%)
Query: 110 LSLDEKKDI--ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
++L + KD +D LD KG+ YFV+N+SSPNT LR LQ D LK LL ++
Sbjct: 132 INLGKNKDTPNSDATLDYQKGLETLYSYGDYFVINISSPNTEGLRDLQYVDTLKPLLASI 191
Query: 168 VETRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
++ RN+L K PI++KIAPDL+ ++ + + ++ + K+D +I +NTT+ R L
Sbjct: 192 LDKRNELCKKHNQYRPIILKIAPDLTPEQLEGVISII--QEVKIDAVIAANTTISRTN-L 248
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+++++++ GGLSG+PL ++STE+IS++Y+ T+G LPIIG GGVF+G+DA+EKIK+GASL+
Sbjct: 249 NSKFQKQNGGLSGKPLNHRSTEIISKIYRQTQGNLPIIGSGGVFTGEDAYEKIKSGASLI 308
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
QIYTS +Y GP + I E+ LL+K+G ++++A+G HK
Sbjct: 309 QIYTSMIYRGPSVAKHINQEILTLLEKDGLTNITEAIGLYHK 350
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLP 100
Q L + +GD YFV+N+SSPNT LR LQ D LK LL ++++ RN+L K
Sbjct: 150 QKGLETLYSYGD---YFVINISSPNTEGLRDLQYVDTLKPLLASILDKRNELCKKHNQYR 206
Query: 101 PILVKIAPDLSLDEKKDIADVV 122
PI++KIAPDL+ ++ + + ++
Sbjct: 207 PIILKIAPDLTPEQLEGVISII 228
>gi|195393362|ref|XP_002055323.1| GJ18851 [Drosophila virilis]
gi|194149833|gb|EDW65524.1| GJ18851 [Drosophila virilis]
Length = 407
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 147/224 (65%), Gaps = 2/224 (0%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ + ++L+ + V+D + G+ F A Y VVN + +R + K +L L
Sbjct: 179 IDVVVGVNLERNRTSKTPVMDYMTGVKTFAPWADYLVVNYD--HLKGMRSVNNKTKLIEL 236
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
L+ V + R QL K PIL+K++PDL+LDE +D+A V+ C+VDGLIVSN T+ R
Sbjct: 237 LEGVNKARAQLGDKVNVPILLKLSPDLTLDEMRDVAAVIKMYACRVDGLIVSNATMYRGN 296
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
+R E GG+SGEPLR +ST LI++MY+LT G +PIIGVGG+ SG+DA+EKI AGAS
Sbjct: 297 LRVSRLATENGGISGEPLRERSTRLIAQMYELTNGCVPIIGVGGISSGRDAYEKIAAGAS 356
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VQIYT+FVY GP LV R+K++L L K GY +++ AVG+ ++
Sbjct: 357 YVQIYTAFVYEGPALVDRVKADLSAWLTKLGYTNINDAVGSNYQ 400
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ F A Y VVN + +R + K +L LL+ V + R QL K PIL+
Sbjct: 200 YMTGVKTFAPWADYLVVNYD--HLKGMRSVNNKTKLIELLEGVNKARAQLGDKVNVPILL 257
Query: 105 KIAPDLSLDEKKDIADVV 122
K++PDL+LDE +D+A V+
Sbjct: 258 KLSPDLTLDEMRDVAAVI 275
>gi|308809734|ref|XP_003082176.1| Dihydroorotate dehydrogenase (ISS) [Ostreococcus tauri]
gi|116060644|emb|CAL57122.1| Dihydroorotate dehydrogenase (ISS), partial [Ostreococcus tauri]
Length = 369
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 3/198 (1%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ D V G+ G+ Y VVNVSSPNT LR LQ + L LL+ V+ R++
Sbjct: 31 ANAADDYVLGVDNIGEYGDYIVVNVSSPNTPGLRNLQGRKHLSGLLRKVLSARDRNPATA 90
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA-RYKEETGGLS 237
P+LVKIAPDL+ E KD+A VV K VDG+IVSNTTV R E + A ++ +E GGLS
Sbjct: 91 KKPVLVKIAPDLTDAEIKDVASVVKSEK--VDGVIVSNTTVARPEEIKAHKHGDEAGGLS 148
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G+PL ST ++ E+Y+LT GK+P++G GGV SG+DA+ KI+AGA+LVQ+YT+F + GPP
Sbjct: 149 GKPLMESSTRVLHELYRLTGGKIPLVGCGGVASGEDAYAKIRAGATLVQLYTAFAFGGPP 208
Query: 298 LVTRIKSELEELLQKEGY 315
L+ +IK ELEE L ++G+
Sbjct: 209 LILKIKRELEECLARDGF 226
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++LG+ G+ Y VVNVSSPNT LR LQ + L LL+ V+ R++ P+LV
Sbjct: 37 YVLGVDNIGEYGDYIVVNVSSPNTPGLRNLQGRKHLSGLLRKVLSARDRNPATAKKPVLV 96
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ E KD+A VV
Sbjct: 97 KIAPDLTDAEIKDVASVV 114
>gi|167538212|ref|XP_001750771.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770688|gb|EDQ84370.1| predicted protein [Monosiga brevicollis MX1]
Length = 478
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K+ + D +G+ + G + Y VVNVSSPNT LR LQ +DQLK LL V +
Sbjct: 171 INLGKNKNQLNAAADYKRGMRELGPLGDYVVVNVSSPNTPGLRDLQNRDQLKQLLTAVRK 230
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR+ L + P+LVKIAPD+ +D+ VV +++ +DG+IVSNTTV R L +
Sbjct: 231 TRDGLDLARPVPLLVKIAPDMDDAFLEDVVAVVRETR--LDGIIVSNTTVARPASLASAN 288
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
KEETGGLSG+PL ST+++ +Y LTKG +P+IGVGGV SG A+ KI++GASLVQ+YT
Sbjct: 289 KEETGGLSGKPLFEPSTQMLRRVYALTKGTVPLIGVGGVDSGATAYAKIRSGASLVQLYT 348
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
S GP +V IK EL ELL ++G+ +V++AVG
Sbjct: 349 SMSLQGPQIVCDIKRELAELLHRDGFTNVAEAVG 382
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ + G + Y VVNVSSPNT LR LQ +DQLK LL V +TR+ L L P+LVKIA
Sbjct: 189 GMRELGPLGDYVVVNVSSPNTPGLRDLQNRDQLKQLLTAVRKTRDGLDLARPVPLLVKIA 248
Query: 108 PDLSLDEKKDIADVVLDS-VKGIL 130
PD+ +D+ VV ++ + GI+
Sbjct: 249 PDMDDAFLEDVVAVVRETRLDGII 272
>gi|356575416|ref|XP_003555837.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like [Glycine max]
Length = 455
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 146/218 (66%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LR LQ + QLK L+K V
Sbjct: 237 VNLGKNKTSEDAASDYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQA 296
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
+ Q + PP+LVKIAPDLS ++ +DIA V L +DGLI+SNTT+ R +
Sbjct: 297 ACDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVAL--TLHLDGLIISNTTISRPDPASK 354
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL N ST ++ EMY LT+G++P+IG GG+ SG+DA++KI+AGA+LVQ
Sbjct: 355 NPLASETGGLSGKPLFNLSTNILKEMYILTRGRIPLIGCGGISSGEDAYKKIRAGATLVQ 414
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YT+F Y GP L+ +IK+EL L+++G+ S+ AVGA
Sbjct: 415 LYTAFAYGGPALIPQIKAELASCLERDGFKSIVDAVGA 452
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LR LQ + QLK L+K V + Q + PP+
Sbjct: 252 YVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAACDEMQWGEEGPPPL 311
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS ++ +DIA V L
Sbjct: 312 LVKIAPDLSKEDLEDIAAVAL 332
>gi|402496725|ref|YP_006555985.1| dihydroorotate dehydrogenase 2 [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398649998|emb|CCF78168.1| dihydroorotate dehydrogenase 2 [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 365
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 140/189 (74%), Gaps = 4/189 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 177 SNYIVLNISSPNTPNLRNLHNKQELSELLKSITLTRQSINSAKYTPIMLKISPDIDQQTK 236
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K+DGL+VSNTTV+R + L Y E+GGLSG PL STEL+S+MYKL
Sbjct: 237 ENIAELALE--YKIDGLVVSNTTVNR-DNLYFHY-NESGGLSGRPLFKLSTELLSDMYKL 292
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TKGK+ +IG GG+ SG DA++KIKAGASLVQ+YT+ +YHGP +V +I EL EL++++G
Sbjct: 293 TKGKMLLIGCGGISSGIDAYKKIKAGASLVQLYTALIYHGPQIVNKINLELAELIRRDGL 352
Query: 316 NSVSQAVGA 324
+++S+AVG
Sbjct: 353 SNISEAVGC 361
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 177 SNYIVLNISSPNTPNLRNLHNKQELSELLKSITLTRQSINSAKYTPIMLKISPDIDQQTK 236
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 237 ENIAELALE 245
>gi|154250893|ref|YP_001411717.1| dihydroorotate dehydrogenase [Parvibaculum lavamentivorans DS-1]
gi|171769559|sp|A7HQ77.1|PYRD_PARL1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|154154843|gb|ABS62060.1| dihydroorotate dehydrogenase [Parvibaculum lavamentivorans DS-1]
Length = 348
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 139/215 (64%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D GI F +A YF VN+SSPNT LR LQ K +L++L+ V+
Sbjct: 137 VNIGANKDAADRIADYEAGIRAFEGLASYFTVNISSPNTPGLRALQNKAELQNLVARVLA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R K P+L+KIAPDL+ +E DIA+V L+ +DGLIVSNTT+ R +
Sbjct: 197 AR-----KGKTPVLLKIAPDLNAEELGDIAEVALEQG--LDGLIVSNTTIAREGLVSGVN 249
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG PL ST ++ +MY+LT G+LP++GVGG+ S DA+ KI+AGASLVQ+Y+
Sbjct: 250 ANETGGLSGAPLFPMSTAVLRDMYRLTGGRLPLVGVGGISSADDAYAKIRAGASLVQLYS 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ Y GPPLV RIK L L +G+ + AVGA
Sbjct: 310 ALTYDGPPLVARIKQGLAARLAADGFAHLKDAVGA 344
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 11 RILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTAN 70
R+L+R R G G N + A + + GI F +A YF VN+SSPNT
Sbjct: 124 RLLARRKRPGILGVNIGAN------KDAADRIADYEAGIRAFEGLASYFTVNISSPNTPG 177
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLD 124
LR LQ K +L++L+ V+ R K P+L+KIAPDL+ +E DIA+V L+
Sbjct: 178 LRALQNKAELQNLVARVLAAR-----KGKTPVLLKIAPDLNAEELGDIAEVALE 226
>gi|386722460|ref|YP_006188786.1| dihydroorotate dehydrogenase 2 [Paenibacillus mucilaginosus K02]
gi|384089585|gb|AFH61021.1| dihydroorotate dehydrogenase 2 [Paenibacillus mucilaginosus K02]
Length = 367
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 144/206 (69%), Gaps = 9/206 (4%)
Query: 126 VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK---PLPPI 182
++ + +GD +FVVN+SSPNT +LR LQ D+L LL V + + + P+
Sbjct: 167 IEALYGYGD---FFVVNISSPNTPDLRSLQHGDELSSLLAAVKDEMGRQHARFGGREKPV 223
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLR 242
LVKIAPDL+ E + +A +L + V G+I SNTT+ R E L +R++ ETGGLSG PL
Sbjct: 224 LVKIAPDLTAQEVEYMAATIL--RSNVSGIIASNTTIGR-EGLQSRHRGETGGLSGRPLT 280
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ST LISE+Y+ T+GKLPIIG GG+F+ +DA+ KI+AGASLV+IYT+ +Y GP ++ RI
Sbjct: 281 ERSTALISELYRATEGKLPIIGSGGIFTAEDAYAKIRAGASLVEIYTALIYEGPAVLGRI 340
Query: 303 KSELEELLQKEGYNSVSQAVGAAHKS 328
L LL+K+G+++VS+A+GAAH+
Sbjct: 341 NQGLIRLLRKDGFSNVSEAIGAAHRG 366
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK---PLPPILVKIAP 108
+GD +FVVN+SSPNT +LR LQ D+L LL V + + + P+LVKIAP
Sbjct: 173 YGD---FFVVNISSPNTPDLRSLQHGDELSSLLAAVKDEMGRQHARFGGREKPVLVKIAP 229
Query: 109 DLSLDEKKDIADVVLDS-VKGIL 130
DL+ E + +A +L S V GI+
Sbjct: 230 DLTAQEVEYMAATILRSNVSGII 252
>gi|83591853|ref|YP_425605.1| dihydroorotate dehydrogenase 2 [Rhodospirillum rubrum ATCC 11170]
gi|386348547|ref|YP_006046795.1| dihydroorotate dehydrogenase 2 [Rhodospirillum rubrum F11]
gi|123527370|sp|Q2RX27.1|PYRD_RHORT RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|83574767|gb|ABC21318.1| dihydroorotate oxidase A [Rhodospirillum rubrum ATCC 11170]
gi|346716983|gb|AEO46998.1| dihydroorotate dehydrogenase 2 [Rhodospirillum rubrum F11]
Length = 367
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 143/218 (65%), Gaps = 2/218 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D GI K +A Y V+NVSSPNT LR LQ ++ L L+
Sbjct: 137 INLGKNKTTEDAAGDYEAGIAKLAPLADYLVINVSSPNTPGLRALQGREPLSLLIARARA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ PP+L+K+APDL+ ++ DIA+V L +DGLI +NTT+ R + L + +
Sbjct: 197 ALDAACPGLRPPLLLKVAPDLTDEDMADIAEVALGGG--LDGLICTNTTIARPKSLVSDH 254
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG PLR ++ ++I+ +Y LTKG LP+IGVGG+ G +A+ +I+AGASL+QIY+
Sbjct: 255 AGETGGLSGLPLRYRARQVIARLYGLTKGALPLIGVGGIGDGAEAYARIRAGASLIQIYS 314
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY GP LV RIK +L + L+ +G+ SV++AVGA H+
Sbjct: 315 ALVYEGPGLVGRIKRDLAQRLRADGFASVAEAVGADHR 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
GI K +A Y V+NVSSPNT LR LQ ++ L L+ + PP+L+K+A
Sbjct: 155 GIAKLAPLADYLVINVSSPNTPGLRALQGREPLSLLIARARAALDAACPGLRPPLLLKVA 214
Query: 108 PDLSLDEKKDIADVVL 123
PDL+ ++ DIA+V L
Sbjct: 215 PDLTDEDMADIAEVAL 230
>gi|111073613|emb|CAL29458.1| Dihydroorotate dehydrogenase [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 365
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 139/189 (73%), Gaps = 4/189 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK++ R + PI++KI+PD+ K
Sbjct: 177 SNYIVLNISSPNTPNLRNLHNKQELSELLKSITLARQSINSSKYTPIMLKISPDIDQQTK 236
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K+DGL+VSNTTV+R + L Y E+GGLSG PL STEL+S+MYKL
Sbjct: 237 ENIAELALE--YKIDGLVVSNTTVNR-DNLYFHY-NESGGLSGRPLFKLSTELLSDMYKL 292
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TKGK+ +IG GG+ SG DA++KIKAGASLVQ+YT+ +YHGP +V +I EL EL++++G
Sbjct: 293 TKGKMLLIGCGGISSGIDAYKKIKAGASLVQLYTALIYHGPQIVNKINLELAELIRRDGL 352
Query: 316 NSVSQAVGA 324
+++S+AVG
Sbjct: 353 SNISEAVGC 361
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK++ R + PI++KI+PD+ K
Sbjct: 177 SNYIVLNISSPNTPNLRNLHNKQELSELLKSITLARQSINSSKYTPIMLKISPDIDQQTK 236
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 237 ENIAELALE 245
>gi|323649924|gb|ADX97048.1| mitochondrial dihydroorotate dehydrogenase [Perca flavescens]
Length = 157
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGE 239
PP+LVKIAPDL+ +K+DIADVV ++ +VDGL+VSNTTV R E L +K E GGLSG+
Sbjct: 2 PPVLVKIAPDLTAQDKQDIADVV--TELRVDGLMVSNTTVSRPETLQDLHKSEIGGLSGQ 59
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
PL++ ST + EMY LTKGK+ I+G+GGV SG+DA +KI+AGASLVQ+YT+ Y GPP+V
Sbjct: 60 PLKDLSTSTVREMYNLTKGKILIVGIGGVASGQDAMDKIRAGASLVQLYTALTYQGPPIV 119
Query: 300 TRIKSELEELLQKEGYNSVSQAVGAAHK 327
T+IK ELE+LL+++G++SVS+AVGA H+
Sbjct: 120 TKIKRELEQLLKEQGFSSVSEAVGADHR 147
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 100 PPILVKIAPDLSLDEKKDIADVVLD 124
PP+LVKIAPDL+ +K+DIADVV +
Sbjct: 2 PPVLVKIAPDLTAQDKQDIADVVTE 26
>gi|384261958|ref|YP_005417144.1| Dihydroorotate dehydrogenase [Rhodospirillum photometricum DSM 122]
gi|378403058|emb|CCG08174.1| Dihydroorotate dehydrogenase [Rhodospirillum photometricum DSM 122]
Length = 363
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 5/223 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + KD D D +G+ VA Y V+NVSSPNT LR LQ ++ L+ L+
Sbjct: 141 VNLGKNKDTEDAAADYERGMACLAPVAGYVVINVSSPNTPGLRALQGREPLQALVGRARR 200
Query: 170 TRNQLAVKPL--PPILVKIAPDLSLDEKKDIADVVLDSKCK---VDGLIVSNTTVDRYEY 224
+ P PP+L+KIAPDL+ D+ DIA V + +DGLI +NTT+ R E+
Sbjct: 201 ALDLACPDPAKRPPLLLKIAPDLTDDDLADIAAVARGDGTEPAPLDGLICTNTTLARPEF 260
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L + K E GGLSG PL+ + +++ +Y LT+G++P+IGVGG+ +G DA+ +++AGASL
Sbjct: 261 LKSPLKGEAGGLSGAPLQRSALDVLRRVYSLTEGRVPLIGVGGITTGADAYARLRAGASL 320
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VQ+Y++ +Y GP LV RIK +L + L+K+G+ SV++AVGA H+
Sbjct: 321 VQVYSALIYEGPGLVRRIKEDLIDCLKKDGFTSVAEAVGADHR 363
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVK 105
G+ VA Y V+NVSSPNT LR LQ ++ L+ L+ + P PP+L+K
Sbjct: 159 GMACLAPVAGYVVINVSSPNTPGLRALQGREPLQALVGRARRALDLACPDPAKRPPLLLK 218
Query: 106 IAPDLSLDEKKDIADVV 122
IAPDL+ D+ DIA V
Sbjct: 219 IAPDLTDDDLADIAAVA 235
>gi|337745908|ref|YP_004640070.1| protein PyrD [Paenibacillus mucilaginosus KNP414]
gi|379719863|ref|YP_005311994.1| protein PyrD [Paenibacillus mucilaginosus 3016]
gi|336297097|gb|AEI40200.1| PyrD [Paenibacillus mucilaginosus KNP414]
gi|378568535|gb|AFC28845.1| PyrD [Paenibacillus mucilaginosus 3016]
Length = 367
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 144/206 (69%), Gaps = 9/206 (4%)
Query: 126 VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV---VETRNQLAVKPLPPI 182
++ + +GD +FVVN+SSPNT +LR LQ D+L LL V + ++ P+
Sbjct: 167 IEALYGYGD---FFVVNISSPNTPDLRSLQHGDELSSLLVAVKDEISRQHARFGGREKPV 223
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLR 242
LVKIAPDL+ E + +A +L + V G+I SNTT+ R E L +R++ ETGGLSG PL
Sbjct: 224 LVKIAPDLTAQEVEYMAATIL--RSNVSGIIASNTTIGR-EGLQSRHRGETGGLSGRPLT 280
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ST LISE+Y+ T+GKLPIIG GG+F+ +DA+ KI+AGASLV+IYT+ +Y GP ++ RI
Sbjct: 281 ERSTALISELYRATEGKLPIIGSGGIFTAEDAYAKIRAGASLVEIYTALIYEGPAVLGRI 340
Query: 303 KSELEELLQKEGYNSVSQAVGAAHKS 328
L LL+K+G+++VS+A+GAAH+
Sbjct: 341 NQGLIRLLRKDGFSNVSEAIGAAHRG 366
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE--TRNQLALKPLP-PILVKIAP 108
+GD +FVVN+SSPNT +LR LQ D+L LL V + +R P+LVKIAP
Sbjct: 173 YGD---FFVVNISSPNTPDLRSLQHGDELSSLLVAVKDEISRQHARFGGREKPVLVKIAP 229
Query: 109 DLSLDEKKDIADVVLDS-VKGIL 130
DL+ E + +A +L S V GI+
Sbjct: 230 DLTAQEVEYMAATILRSNVSGII 252
>gi|56756086|gb|AAW26221.1| SJCHGC02326 protein [Schistosoma japonicum]
Length = 385
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 136/201 (67%), Gaps = 13/201 (6%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D V G+ KFG+VA Y V+NVSSPNT LR LQAKD+L+ LL V+ RN+L+ K
Sbjct: 178 DPTSDYVAGVRKFGEVADYLVINVSSPNTPGLRSLQAKDKLRCLLSKVLTARNELSKKT- 236
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA-------RYKEE 232
PIL+KI+PD + DI +V LDSK ++DG+IVSNTT+ YE A + E+
Sbjct: 237 -PILLKISPDENDQSLVDIVEVALDSKTRIDGIIVSNTTLATYEQAMACGAAPILKNNEQ 295
Query: 233 T----GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
GGLSG PL KST+ + ++ +LTKG +P+IGVGG+ SG+DA K+ AGASLVQ+Y
Sbjct: 296 NTNVYGGLSGRPLFEKSTDCLKKISELTKGAIPLIGVGGISSGEDALSKLNAGASLVQLY 355
Query: 289 TSFVYHGPPLVTRIKSELEEL 309
TSFVY GPP+ ++ EL EL
Sbjct: 356 TSFVYQGPPVAHKVARELNEL 376
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KFG+VA Y V+NVSSPNT LR LQAKD+L+ LL V+ RN+L+ K PIL+
Sbjct: 183 YVAGVRKFGEVADYLVINVSSPNTPGLRSLQAKDKLRCLLSKVLTARNELSKK--TPILL 240
Query: 105 KIAPDLSLDEKKDIADVVLDS---VKGIL 130
KI+PD + DI +V LDS + GI+
Sbjct: 241 KISPDENDQSLVDIVEVALDSKTRIDGII 269
>gi|154244014|ref|YP_001414972.1| dihydroorotate dehydrogenase 2 [Xanthobacter autotrophicus Py2]
gi|226710795|sp|A7IBC2.1|PYRD_XANP2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|154158099|gb|ABS65315.1| Dihydroorotate oxidase [Xanthobacter autotrophicus Py2]
Length = 357
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 142/215 (66%), Gaps = 4/215 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ + K+ D + D G+ +A Y V N+SSPNT LR LQA+ +++ LL V+
Sbjct: 141 NVGKNKESEDALEDYGAGVSATCRLADYLVCNISSPNTPGLRALQARAEMETLLAHVISV 200
Query: 171 RNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
RN P P+LVK+APDL D+A+ L VDG+I+ NTT+ R L ++
Sbjct: 201 RNASMPDPAARTPLLVKVAPDLDDAALADVAEASL--ATGVDGIIMGNTTLSRPASLQSK 258
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+K+ETGGLSG+PL STE + +Y+L G+LPIIGVGG+ SG DA+ K++AGASLVQIY
Sbjct: 259 FKDETGGLSGKPLLALSTERLGALYRLVGGRLPIIGVGGIASGADAYAKVRAGASLVQIY 318
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
++ V+HGP LVTRIK++L L+ +G+ S++ AVG
Sbjct: 319 SALVFHGPGLVTRIKTDLAARLKADGFASIADAVG 353
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 16 VFRSGEWGCTPTHNMLSSFA---RMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLR 72
VFR G+ + H ++ + + L+ + G+ +A Y V N+SSPNT LR
Sbjct: 123 VFRLGQRRASGKHGIVGANVGKNKESEDALEDYGAGVSATCRLADYLVCNISSPNTPGLR 182
Query: 73 KLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLDEKKDIADVVLDS-VKGI 129
LQA+ +++ LL V+ RN P P+LVK+APDL D+A+ L + V GI
Sbjct: 183 ALQARAEMETLLAHVISVRNASMPDPAARTPLLVKVAPDLDDAALADVAEASLATGVDGI 242
Query: 130 L 130
+
Sbjct: 243 I 243
>gi|195132127|ref|XP_002010495.1| GI15959 [Drosophila mojavensis]
gi|193908945|gb|EDW07812.1| GI15959 [Drosophila mojavensis]
Length = 403
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP- 180
+ D + G+ FG VA Y VVN S+ +K QL LL+ V R+QL
Sbjct: 186 ISDYMSGVKTFGPVADYLVVNYSNAK-GKRHSTSSKKQLIELLEAVNTARSQLRPNRYGK 244
Query: 181 -PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGE 239
PIL+K++PD++LDE KD+A V+ S C+VDGLIV+N T+ +R+ E G LSGE
Sbjct: 245 VPILLKLSPDMTLDEMKDVASVISMSTCQVDGLIVANATMVHKNVSGSRWLREKGALSGE 304
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
PLR +ST +I++MY+L +PIIGVGGV SG DAFEKI+AGAS VQIYT+FVY GP LV
Sbjct: 305 PLRQRSTAMIAQMYQLINNSVPIIGVGGVSSGHDAFEKIEAGASYVQIYTAFVYEGPELV 364
Query: 300 TRIKSELEELLQKEGYNSVSQAVGAAHK 327
RIKSEL + + GY ++ + VG+ ++
Sbjct: 365 ERIKSELSMCIAEMGYENIREVVGSNYQ 392
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ G+ FG VA Y VVN S+ +K QL LL+ V R+QL PI
Sbjct: 189 YMSGVKTFGPVADYLVVNYSNAK-GKRHSTSSKKQLIELLEAVNTARSQLRPNRYGKVPI 247
Query: 103 LVKIAPDLSLDEKKDIADVV 122
L+K++PD++LDE KD+A V+
Sbjct: 248 LLKLSPDMTLDEMKDVASVI 267
>gi|449015570|dbj|BAM78972.1| dihydroorotate oxidase [Cyanidioschyzon merolae strain 10D]
Length = 429
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 169/265 (63%), Gaps = 11/265 (4%)
Query: 69 ANLRKLQAKDQLKHLLKTVVETRNQLA-LKPLPPILVKIAPDLSLDEKKDIA--DVVLDS 125
A+L++L+ + H V RN +A P + K +++ + ++ + D + D
Sbjct: 170 AHLKRLRDR---SHEAGQVATARNSVANTTPTQTMPGKKHLGINIGKNRETSEDDALSDY 226
Query: 126 VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK-PLPPILV 184
++ + G A Y VVNVSSPNT LR LQ K++L+ L++ + R+ + P+LV
Sbjct: 227 IQVLRTLGAFADYLVVNVSSPNTPGLRLLQRKERLRDLIRQLKRERDDRGPQWQRLPLLV 286
Query: 185 KIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK--EETGGLSGEPLR 242
K+APDLS +E +DIA++V+ VDG++V+NTTV R L + ++ GGLSG PLR
Sbjct: 287 KVAPDLSDEEIRDIAEIVVSEG--VDGIVVTNTTVQRPVTLQSPVNLVQQEGGLSGTPLR 344
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ ST ++ Y+ T GK+P+IGVGG+FSG DA+ KI+AGASLVQ+YT+ +Y GP LV R+
Sbjct: 345 DLSTYVLGRFYRYTLGKVPLIGVGGIFSGADAYAKIRAGASLVQLYTALMYEGPCLVPRL 404
Query: 303 KSELEELLQKEGYNSVSQAVGAAHK 327
+ EL + LQ++GY ++ +A+GA H+
Sbjct: 405 ERELVQCLQRDGYRNIVEAIGADHR 429
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK-PLPPILVKIAPDL 110
G A Y VVNVSSPNT LR LQ K++L+ L++ + R+ + P+LVK+APDL
Sbjct: 233 LGAFADYLVVNVSSPNTPGLRLLQRKERLRDLIRQLKRERDDRGPQWQRLPLLVKVAPDL 292
Query: 111 SLDEKKDIADVVL-DSVKGIL 130
S +E +DIA++V+ + V GI+
Sbjct: 293 SDEEIRDIAEIVVSEGVDGIV 313
>gi|224010571|ref|XP_002294243.1| hypothetical protein THAPSDRAFT_264316 [Thalassiosira pseudonana
CCMP1335]
gi|220970260|gb|EED88598.1| hypothetical protein THAPSDRAFT_264316 [Thalassiosira pseudonana
CCMP1335]
Length = 371
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 152/215 (70%), Gaps = 4/215 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D + D GI + G A Y V+NVSSPNT LR LQ ++ L+HLL + ++
Sbjct: 148 VNLGKNKTSDDEIGDYTTGIRELGPYADYLVINVSSPNTPGLRSLQQREPLQHLLTSTLK 207
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
RN A P P+ VK+APDL+ +E +D+A VV+++ +DG+IVSNTT R + L +
Sbjct: 208 ARNSYA--PHAPLFVKLAPDLTEEEMEDVAQVVMETG--IDGMIVSNTTNARPDSLLSHN 263
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG P+R++STE I MY+LT G +PIIGVGGV SG+DA++K+KAGASL+Q+Y+
Sbjct: 264 KHEVGGLSGAPIRDRSTECIRTMYRLTNGSIPIIGVGGVGSGRDAYDKLKAGASLIQVYS 323
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VY GP L++RI+ EL +++++ GY SV + VGA
Sbjct: 324 MMVYEGPGLISRIRKELADIVEENGYISVDEVVGA 358
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ GI + G A Y V+NVSSPNT LR LQ ++ L+HLL + ++ RN A P P+ V
Sbjct: 163 YTTGIRELGPYADYLVINVSSPNTPGLRSLQQREPLQHLLTSTLKARNSYA--PHAPLFV 220
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
K+APDL+ +E +D+A VV+++
Sbjct: 221 KLAPDLTEEEMEDVAQVVMET 241
>gi|256085612|ref|XP_002579010.1| dihydroorotate dehydrogenase [Schistosoma mansoni]
gi|360043233|emb|CCD78646.1| dihydroorotate dehydrogenase [Schistosoma mansoni]
Length = 379
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 138/210 (65%), Gaps = 12/210 (5%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K AD D V G+ KFG+VA Y V+NVSSPNT LR LQ K++L+ LL V+
Sbjct: 168 VNLGCNKTSADPTADYVAGVRKFGEVADYLVINVSSPNTPGLRSLQTKEKLRDLLSKVLA 227
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY----- 224
RNQL+ K PIL+KI+PD + KDI +V LDSK ++DG+I+SNTT+ YE
Sbjct: 228 ARNQLSKKT--PILLKISPDENDQNLKDIVEVALDSKTRIDGMIISNTTLTTYEEAVACG 285
Query: 225 ---LDARYKEET--GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIK 279
+ K+ GGLSG PL KST+ + ++ LTKG +P+IGVGG+ G+DA K+
Sbjct: 286 AAPIPGNNKQNVVYGGLSGRPLFEKSTDCLRKVSALTKGAIPLIGVGGISCGEDALSKLN 345
Query: 280 AGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
AGASLVQ+YTSFVY GPP+ ++ E+ +L
Sbjct: 346 AGASLVQLYTSFVYQGPPVAHKVAREINKL 375
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KFG+VA Y V+NVSSPNT LR LQ K++L+ LL V+ RNQL+ K PIL+
Sbjct: 183 YVAGVRKFGEVADYLVINVSSPNTPGLRSLQTKEKLRDLLSKVLAARNQLSKK--TPILL 240
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KI+PD + KDI +V LDS
Sbjct: 241 KISPDENDQNLKDIVEVALDS 261
>gi|58698420|ref|ZP_00373331.1| dihydroorotate oxidase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630899|ref|YP_002727690.1| dihydroorotate dehydrogenase [Wolbachia sp. wRi]
gi|58535075|gb|EAL59163.1| dihydroorotate oxidase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592880|gb|ACN95899.1| dihydroorotate dehydrogenase [Wolbachia sp. wRi]
Length = 355
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 139/191 (72%), Gaps = 4/191 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK+V TR + PI++KI+PD+ K
Sbjct: 169 SNYIVLNISSPNTPNLRNLHNKQELSELLKSVTLTRKSIDNSKSIPIILKISPDVDQQTK 228
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K+DGL VSNTTV R + L + + E+GGLSG+PL STEL+ +MYK
Sbjct: 229 ENIAELALE--YKIDGLTVSNTTVSR-DNLHSHH-NESGGLSGKPLFKLSTELLGDMYKF 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TKGK+ +IG GG+ SG DA++KIKAGASLVQ+YT+ +YHGP +V +I EL EL++++G+
Sbjct: 285 TKGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPQVVNKINLELAELIRRDGF 344
Query: 316 NSVSQAVGAAH 326
+++S+ VG H
Sbjct: 345 SNISEVVGCIH 355
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK+V TR + PI++KI+PD+ K
Sbjct: 169 SNYIVLNISSPNTPNLRNLHNKQELSELLKSVTLTRKSIDNSKSIPIILKISPDVDQQTK 228
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 229 ENIAELALE 237
>gi|144900447|emb|CAM77311.1| Dihydroorotate dehydrogenase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 356
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 143/221 (64%), Gaps = 7/221 (3%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL---KTV 167
+L + KD D D KG + Y V+NVSSPNT LR LQ +DQL+ L+ +T
Sbjct: 138 NLGKNKDTEDAASDYEKGASRLAAYCDYMVINVSSPNTPGLRALQGRDQLEGLVGRTRTA 197
Query: 168 VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
++ ++ A +P P+L+KIAPDL+ ++ DIA V + +DGLIVSNTT+ R + L +
Sbjct: 198 LDLASEGAKRP--PLLLKIAPDLNDEDLADIAAVSV--AGSLDGLIVSNTTIARPDSLQS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ETGGLSG PL ST ++ MY LT+GKLP++G GG+ S DA+ KIKAGASLVQ+
Sbjct: 254 PEAKETGGLSGAPLLAPSTAVLYRMYALTEGKLPLVGAGGIASAADAYAKIKAGASLVQV 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
Y++ VY G LV RI + LL +G+ S++QA+GA H+
Sbjct: 314 YSALVYQGTGLVERINKGVIALLAADGFTSITQAIGADHRG 354
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP----LPPIL 103
G + Y V+NVSSPNT LR LQ +DQL+ L V TR L L PP+L
Sbjct: 155 GASRLAAYCDYMVINVSSPNTPGLRALQGRDQLEGL---VGRTRTALDLASEGAKRPPLL 211
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGIL 130
+KIAPDL+ DE D+AD+ SV G L
Sbjct: 212 LKIAPDLN-DE--DLADIAAVSVAGSL 235
>gi|407783811|ref|ZP_11131004.1| dihydroorotate dehydrogenase 2 [Oceanibaculum indicum P24]
gi|407199495|gb|EKE69512.1| dihydroorotate dehydrogenase 2 [Oceanibaculum indicum P24]
Length = 354
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 144/220 (65%), Gaps = 5/220 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD---QLKHLLKT 166
+++ + KD D V D V G F +A Y VVNVSSPNT LR LQ ++ +L ++
Sbjct: 135 INIGKNKDSTDAVEDYVTGATAFAPLADYLVVNVSSPNTPGLRDLQRREPFLELARAVRA 194
Query: 167 VVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ A + PP+L+KIAPDL + +D+A+V + + DGLIVSNTT+ R + L
Sbjct: 195 ARDAACAAAGRTPPPLLLKIAPDLDAAQIEDVAEVAMSAPA--DGLIVSNTTIARPDSLR 252
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ Y+ E GGLSG PL STE++ + LT+GKLP+IGVGG+ SG+ A+ KI+AGASLVQ
Sbjct: 253 SIYRAEAGGLSGAPLFEPSTEVLRRIAGLTQGKLPLIGVGGIASGEQAYAKIRAGASLVQ 312
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+Y++ VYHGP L+ RIK +L L+ +G+ SV++AVG
Sbjct: 313 LYSALVYHGPGLLGRIKRDLAARLRADGFASVAEAVGTGR 352
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKD---QLKHLLKTVVETRNQLALKPLPP 101
++ G F +A Y VVNVSSPNT LR LQ ++ +L ++ + A + PP
Sbjct: 150 YVTGATAFAPLADYLVVNVSSPNTPGLRDLQRREPFLELARAVRAARDAACAAAGRTPPP 209
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS 125
+L+KIAPDL + +D+A+V + +
Sbjct: 210 LLLKIAPDLDAAQIEDVAEVAMSA 233
>gi|412985283|emb|CCO20308.1| dihydroorotate dehydrogenase [Bathycoccus prasinos]
Length = 597
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 147/230 (63%), Gaps = 11/230 (4%)
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
+ PI V + + + E + L G + G A Y V+NVSSPNT LR LQ
Sbjct: 359 IAPIGVNLGKNKTTPESEAAKSYAL----GATELGPFADYLVINVSSPNTPGLRDLQKGS 414
Query: 159 QLKHLLKTVVETRNQLAVKPLP----PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIV 214
L +L+ VV R++L VK P+LVKIAPD+ K+IA V K K+DG+I+
Sbjct: 415 SLVKILRDVVNARDRLLVKEEKKKSLPVLVKIAPDVDEKGLKEIAKAV--KKAKIDGVII 472
Query: 215 SNTTVDRYEYLDARYK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKD 273
SNTT++R + + +E GGLSG+P+ KSTE++ Y+LT G +P++G GGVF+G+D
Sbjct: 473 SNTTIERNDRVQQHENGKEIGGLSGKPVFEKSTEVLRRFYELTDGSIPLVGCGGVFTGED 532
Query: 274 AFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
A +KIKAGASLVQ+YTSF Y GP L+ ++K EL E L++EG+ +V++AVG
Sbjct: 533 ALKKIKAGASLVQLYTSFAYAGPALIPKVKRELYEALKREGFKNVNEAVG 582
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP---- 100
+ LG + G A Y V+NVSSPNT LR LQ L +L+ VV R++L +K
Sbjct: 381 YALGATELGPFADYLVINVSSPNTPGLRDLQKGSSLVKILRDVVNARDRLLVKEEKKKSL 440
Query: 101 PILVKIAPDLSLDEKKDIADVV 122
P+LVKIAPD+ K+IA V
Sbjct: 441 PVLVKIAPDVDEKGLKEIAKAV 462
>gi|158426264|ref|YP_001527556.1| dihydroorotate dehydrogenase 2 [Azorhizobium caulinodans ORS 571]
gi|172047926|sp|A8HZX8.1|PYRD_AZOC5 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|158333153|dbj|BAF90638.1| dihydroorotate dehydrogenase 2 [Azorhizobium caulinodans ORS 571]
Length = 356
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 143/218 (65%), Gaps = 8/218 (3%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ + K+ D D V G+ +A Y V NVSSPNT LR LQA+ ++ L+ +
Sbjct: 140 NVGKNKETEDASEDYVAGVSATCRLADYIVCNVSSPNTPGLRLLQARTEMSALIGAALSA 199
Query: 171 RNQ----LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
RN A +P P+LVK+APDL + +A+V L+ VDG+I+ NTT+ R + L
Sbjct: 200 RNDSLPDAATRP--PLLVKVAPDLDDAGLEAVAEVTLE--LGVDGIIMGNTTISRPDSLR 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+R+K ETGGLSG PL STE + +Y+L +G++P++G GG+ SG DA+ KI+AGASLVQ
Sbjct: 256 SRHKGETGGLSGAPLFTLSTERLGALYRLVRGRIPLVGAGGIASGADAYAKIRAGASLVQ 315
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y++ V+HGP LV RIK++L L+ +G+ SV+ AVGA
Sbjct: 316 LYSALVFHGPALVPRIKADLAARLKADGFRSVADAVGA 353
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN----QLALKPLP 100
++ G+ +A Y V NVSSPNT LR LQA+ ++ L+ + RN A + P
Sbjct: 154 YVAGVSATCRLADYIVCNVSSPNTPGLRLLQARTEMSALIGAALSARNDSLPDAATR--P 211
Query: 101 PILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
P+LVK+APDL + +A+V L+ V GI+
Sbjct: 212 PLLVKVAPDLDDAGLEAVAEVTLELGVDGII 242
>gi|42521036|ref|NP_966951.1| dihydroorotate dehydrogenase 2 [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99035123|ref|ZP_01314907.1| hypothetical protein Wendoof_01000253 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410777|gb|AAS14885.1| dihydroorotate dehydrogenase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 355
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 139/191 (72%), Gaps = 4/191 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK+V TR + PI++KI+PD+ K
Sbjct: 169 SNYIVLNISSPNTPNLRNLHNKQELSELLKSVTLTRKSIDNSKSIPIILKISPDVDQQTK 228
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K+DGL VSNTTV R + L + + E+GGLSG+PL STEL+ +MYK
Sbjct: 229 ENIAELALE--YKIDGLTVSNTTVSR-DNLHSHH-NESGGLSGKPLFKLSTELLGDMYKF 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TKGK+ +IG GG+ SG DA++KIKAGASLVQ+YT+ +YHGP +V +I EL EL++++G+
Sbjct: 285 TKGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPQVVNKINLELAELIRRDGF 344
Query: 316 NSVSQAVGAAH 326
+++++ VG H
Sbjct: 345 SNINEVVGCIH 355
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK+V TR + PI++KI+PD+ K
Sbjct: 169 SNYIVLNISSPNTPNLRNLHNKQELSELLKSVTLTRKSIDNSKSIPIILKISPDVDQQTK 228
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 229 ENIAELALE 237
>gi|353328387|ref|ZP_08970714.1| dihydroorotate dehydrogenase 2 [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 355
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 137/191 (71%), Gaps = 7/191 (3%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 172 SNYIVLNISSPNTPNLRDLHNKQELSKLLKSITLTRKSIDSSESIPIILKISPDIDQQTK 231
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K +DGLIVSNTT+ R Y + E+GGLSG PL STEL+S+MYKL
Sbjct: 232 ENIAELTLEYK--IDGLIVSNTTISRDSYYN-----ESGGLSGRPLFQLSTELLSDMYKL 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TK ++ +IG GGV SG DA+EKIKAGASLVQ+YT+ VY G +V +I EL EL++++G+
Sbjct: 285 TKSRILLIGCGGVSSGIDAYEKIKAGASLVQLYTALVYQGHQVVNKINLELAELVKRDGF 344
Query: 316 NSVSQAVGAAH 326
+++++AVG H
Sbjct: 345 SNITEAVGCIH 355
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 172 SNYIVLNISSPNTPNLRDLHNKQELSKLLKSITLTRKSIDSSESIPIILKISPDIDQQTK 231
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 232 ENIAELTLE 240
>gi|190571468|ref|YP_001975826.1| dihydroorotate dehydrogenase 2 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018871|ref|ZP_03334679.1| dihydroorotate dehydrogenase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357740|emb|CAQ55191.1| dihydroorotate dehydrogenase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995822|gb|EEB56462.1| dihydroorotate dehydrogenase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 355
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 7/191 (3%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 172 SNYIVLNISSPNTPNLRDLHNKQELSKLLKSITLTRKSIDSSESIPIILKISPDIDQQTK 231
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K +DGLIVSNTT+ R Y + E+GGLSG PL STEL+S+MYKL
Sbjct: 232 ENIAELTLEYK--IDGLIVSNTTISRDSYYN-----ESGGLSGRPLFQLSTELLSDMYKL 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TK ++ +IG GG+ SG DA+EKIKAGASLVQ+YT+ VY G +V +I EL EL++++G+
Sbjct: 285 TKSRILLIGCGGISSGVDAYEKIKAGASLVQLYTALVYQGHQVVNKINLELAELVKRDGF 344
Query: 316 NSVSQAVGAAH 326
+++++AVG H
Sbjct: 345 SNITEAVGCIH 355
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 172 SNYIVLNISSPNTPNLRDLHNKQELSKLLKSITLTRKSIDSSESIPIILKISPDIDQQTK 231
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 232 ENIAELTLE 240
>gi|225677312|ref|ZP_03788289.1| dihydroorotate dehydrogenase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590639|gb|EEH11889.1| dihydroorotate dehydrogenase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 355
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 138/191 (72%), Gaps = 4/191 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT NLR L K +L LLK+V R + PI++KI+PD+ K
Sbjct: 169 SNYIVLNISSPNTPNLRNLHNKQELSELLKSVTLIRKSIDNSKSIPIILKISPDVDQQTK 228
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K+DGL VSNTTV R + L + + E+GGLSG+PL STEL+ +MYK
Sbjct: 229 ENIAELALE--YKIDGLTVSNTTVSR-DNLHSHH-NESGGLSGKPLFKLSTELLGDMYKF 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TKGK+ +IG GG+ SG DA++KIKAGASLVQ+YT+ +YHGP +V +I EL EL++++G+
Sbjct: 285 TKGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPQVVNKINLELAELIRRDGF 344
Query: 316 NSVSQAVGAAH 326
+++S+ VG H
Sbjct: 345 SNISEVVGCIH 355
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT NLR L K +L LLK+V R + PI++KI+PD+ K
Sbjct: 169 SNYIVLNISSPNTPNLRNLHNKQELSELLKSVTLIRKSIDNSKSIPIILKISPDVDQQTK 228
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 229 ENIAELALE 237
>gi|347757515|ref|YP_004865077.1| dihydroorotate oxidase [Micavibrio aeruginosavorus ARL-13]
gi|347590033|gb|AEP09075.1| dihydroorotate oxidase [Micavibrio aeruginosavorus ARL-13]
Length = 359
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 140/231 (60%), Gaps = 6/231 (2%)
Query: 97 KPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQA 156
+P PP LV I ++ K +D D + + G A Y VN+SSPNT LR LQ
Sbjct: 135 RPRPPGLVGI----NIGMNKGQSDPAKDYMLLVQALGPFADYLTVNISSPNTPGLRDLQE 190
Query: 157 KDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
D K L+ ++ R + PP+LVK+APDL D+ + +A V +DS VDGLI++N
Sbjct: 191 PDTFKELIGKILHERGRSCGMAPPPLLVKLAPDLPDDQLQTLARVAVDSH--VDGLILTN 248
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT+DR ++L + E GGLSG+ L KST I+ Y T G LPIIG GGV A++
Sbjct: 249 TTLDRPDHLPESFAREKGGLSGQILHKKSTRAIALAYSATNGTLPIIGAGGVHDADSAYD 308
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
KIKAGASLVQ+Y++ + GP +V IKS L E LQ +GY+ V +AVGA H+
Sbjct: 309 KIKAGASLVQLYSALAFKGPGVVKEIKSGLIERLQADGYSHVGEAVGADHR 359
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++L + G A Y VN+SSPNT LR LQ D K L+ ++ R + PP+LV
Sbjct: 159 YMLLVQALGPFADYLTVNISSPNTPGLRDLQEPDTFKELIGKILHERGRSCGMAPPPLLV 218
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
K+APDL D+ + +A V +DS V G++
Sbjct: 219 KLAPDLPDDQLQTLARVAVDSHVDGLI 245
>gi|310641375|ref|YP_003946133.1| dihydroorotate dehydrogenase [Paenibacillus polymyxa SC2]
gi|386040415|ref|YP_005959369.1| dihydroorotate dehydrogenase [Paenibacillus polymyxa M1]
gi|309246325|gb|ADO55892.1| dihydroorotate dehydrogenase 2 [Paenibacillus polymyxa SC2]
gi|343096453|emb|CCC84662.1| dihydroorotate dehydrogenase [Paenibacillus polymyxa M1]
Length = 364
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 151/229 (65%), Gaps = 11/229 (4%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
V IA ++ ++ D D K I A +FVVN+SSPNT +LRKLQ +LK L
Sbjct: 142 VPIAVNIGKNKVTPNEDAHKDYEKCISALYPYADFFVVNISSPNTPDLRKLQHGSELKSL 201
Query: 164 LKTVVETRNQLAVKPLP-----PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
L+ V R ++ V+ +LVKIAPD+S +E + + D + S VDG+I +NTT
Sbjct: 202 LEAV---RAEMGVQATKYGKAKSVLVKIAPDVSDEELEYMTDAIAASG--VDGIIATNTT 256
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ R L R ETGGLSG+PLR++STE+I +Y+ T+GKLPIIG GG+F+ +DA++KI
Sbjct: 257 ISRTG-LTHRNASETGGLSGKPLRDRSTEVIGRVYRQTEGKLPIIGSGGIFTSRDAYDKI 315
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
KAGASL++IYT+ +Y GP + I + L ELL+K+G+ +++AVGAAH+
Sbjct: 316 KAGASLIEIYTALIYEGPEVNRAIHAGLRELLRKDGFRHITEAVGAAHR 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A +FVVN+SSPNT +LRKLQ +LK LL+ V A K +LVKIAPD+S +
Sbjct: 174 ADFFVVNISSPNTPDLRKLQHGSELKSLLEAVRAEMGVQATKYGKAKSVLVKIAPDVSDE 233
Query: 114 EKKDIADVVLDS-VKGIL 130
E + + D + S V GI+
Sbjct: 234 ELEYMTDAIAASGVDGII 251
>gi|221504183|gb|EEE29858.1| dihydroorotate dehydrogenase, putative [Toxoplasma gondii VEG]
Length = 592
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 145/251 (57%), Gaps = 37/251 (14%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+SL + K D V D +G+ K G A + VVN+SSPNT LR LQ+ L ++ V E
Sbjct: 333 VSLGKNKTSEDAVADLREGVKKLGRFADFLVVNLSSPNTPGLRSLQSASHLAAIIDGVQE 392
Query: 170 T---------------------------------RNQLAVKPLPPILVKIAPDLSLDEKK 196
NQ +PL VKIAPDLS++EK+
Sbjct: 393 ELDALDRQAQAASQKQRNERRRHGGNPEETKAFYANQTGRRPL--FFVKIAPDLSMEEKE 450
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
IA V L+ +DG +VSNTT+ R E L + K ETGGLSG L++ ST +S+MYKLT
Sbjct: 451 SIAKVALEKN--LDGFVVSNTTIQRPETLKSPAKSETGGLSGRALKHLSTACVSDMYKLT 508
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+GKL II GGV SG+DA +KI+AGASLV++Y+S VY GP + R+K+EL + L ++GY
Sbjct: 509 QGKLAIIATGGVESGRDALDKIEAGASLVELYSSMVYIGPQVARRVKNELYQALNEKGYK 568
Query: 317 SVSQAVGAAHK 327
V+ AVG HK
Sbjct: 569 DVAAAVGRKHK 579
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 35/110 (31%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET----------------- 90
G+ K G A + VVN+SSPNT LR LQ+ L ++ V E
Sbjct: 351 GVKKLGRFADFLVVNLSSPNTPGLRSLQSASHLAAIIDGVQEELDALDRQAQAASQKQRN 410
Query: 91 ----------------RNQLALKPLPPILVKIAPDLSLDEKKDIADVVLD 124
NQ +PL VKIAPDLS++EK+ IA V L+
Sbjct: 411 ERRRHGGNPEETKAFYANQTGRRPL--FFVKIAPDLSMEEKESIAKVALE 458
>gi|373451000|ref|ZP_09542939.1| dihydro-orotate oxidase [Wolbachia pipientis wAlbB]
gi|371931807|emb|CCE77957.1| dihydro-orotate oxidase [Wolbachia pipientis wAlbB]
Length = 355
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 137/191 (71%), Gaps = 7/191 (3%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
++Y V+N+SSPNT +LR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 172 SNYIVLNISSPNTPSLRDLHNKQELSKLLKSITLTRKSIDSSESIPIILKISPDIDQQTK 231
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++IA++ L+ K +DGLIVSNTT+ R Y + E+GGLSG PL STEL+S+MYKL
Sbjct: 232 ENIAELTLEYK--IDGLIVSNTTISRDSYYN-----ESGGLSGRPLFQLSTELLSDMYKL 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
TK ++ +IG GGV SG DA+EKIKAGASLVQ+YT+ VY G +V +I EL EL++++G+
Sbjct: 285 TKSRILLIGCGGVSSGIDAYEKIKAGASLVQLYTALVYQGHQVVNKINLELAELVKRDGF 344
Query: 316 NSVSQAVGAAH 326
+++++AVG H
Sbjct: 345 SNITEAVGCIH 355
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
++Y V+N+SSPNT +LR L K +L LLK++ TR + PI++KI+PD+ K
Sbjct: 172 SNYIVLNISSPNTPSLRDLHNKQELSKLLKSITLTRKSIDSSESIPIILKISPDIDQQTK 231
Query: 116 KDIADVVLD 124
++IA++ L+
Sbjct: 232 ENIAELTLE 240
>gi|302381929|ref|YP_003817752.1| dihydroorotate dehydrogenase [Brevundimonas subvibrioides ATCC
15264]
gi|302192557|gb|ADL00129.1| dihydroorotate dehydrogenase [Brevundimonas subvibrioides ATCC
15264]
Length = 343
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 7/216 (3%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L KD D D V G+ + +A YF VN+SSPNT LR LQ +D L LL V E
Sbjct: 135 NLGANKDSEDRAADYVTGLRRLTGLADYFTVNISSPNTPGLRALQGRDALDDLLGRVAEA 194
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R A P+ +KIAPDL+ E I + L +VD LIVSNTT+DR + L + +
Sbjct: 195 RTTAA-----PVFLKIAPDLTAAEIAMIVEAAL--AHRVDALIVSNTTLDRPDGLRSSDR 247
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG+PL+ ++ + + + G++P+IGVGG+ SG+DA+++I+AGAS +QIY++
Sbjct: 248 TEAGGLSGDPLKARALTALRDAAAVAAGRIPLIGVGGIASGQDAWDRIRAGASAIQIYSA 307
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+Y GP LV RIK +L L+ EG++SVS AVGA+
Sbjct: 308 LIYEGPSLVGRIKRDLVARLRAEGFSSVSDAVGASR 343
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ + +A YF VN+SSPNT LR LQ +D L LL V E R A P+ +
Sbjct: 149 YVTGLRRLTGLADYFTVNISSPNTPGLRALQGRDALDDLLGRVAEARTTAA-----PVFL 203
Query: 105 KIAPDLSLDEKKDIADVVL 123
KIAPDL+ E I + L
Sbjct: 204 KIAPDLTAAEIAMIVEAAL 222
>gi|440796338|gb|ELR17447.1| dihydroorotate oxidase [Acanthamoeba castellanii str. Neff]
Length = 423
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 146/212 (68%), Gaps = 11/212 (5%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV--ETRNQLAVK---P 178
D V+ + + A Y V+N+SSPNT NLR LQ+ +L+ +L+ V+ + R + A K
Sbjct: 207 DYVELMQRLSPYADYLVINISSPNTPNLRLLQSGSELQKILEQVMAEKKRAEAASKSATA 266
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR----YEYLDARYKEETG 234
PP+L+KIAPDL+ + +DIA L K KVDG+IVSNTTV R + + +E G
Sbjct: 267 YPPVLIKIAPDLTKAQAEDIAAAAL--KYKVDGIIVSNTTVSRPLRVHNEQEETIAKEAG 324
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL ST+L+ +MY+LT+G++P+IGVGG+ SGKDA++KIKAGASLVQ+YT VY
Sbjct: 325 GLSGRPLLEMSTQLLRDMYRLTEGRIPLIGVGGISSGKDAYDKIKAGASLVQLYTGLVYE 384
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
GP LV R+K EL ELL ++G+ ++ +AVG H
Sbjct: 385 GPGLVGRVKKELVELLDRDGFRTIEEAVGHDH 416
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV--ETRNQLALK---PLPPILVKIAPDL 110
A Y V+N+SSPNT NLR LQ+ +L+ +L+ V+ + R + A K PP+L+KIAPDL
Sbjct: 219 ADYLVINISSPNTPNLRLLQSGSELQKILEQVMAEKKRAEAASKSATAYPPVLIKIAPDL 278
Query: 111 S 111
+
Sbjct: 279 T 279
>gi|237843873|ref|XP_002371234.1| dihydroorotate dehydrogenase [Toxoplasma gondii ME49]
gi|21309852|gb|AAM46067.1|AF271664_1 dihydroorotate dehydrogenase [Toxoplasma gondii]
gi|211968898|gb|EEB04094.1| dihydroorotate dehydrogenase [Toxoplasma gondii ME49]
gi|221483817|gb|EEE22129.1| dihydroorotate dehydrogenase, putative [Toxoplasma gondii GT1]
Length = 592
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 144/251 (57%), Gaps = 37/251 (14%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+SL + K D V D +G+ K G A + VVN+SSPNT LR LQ+ L ++ V E
Sbjct: 333 VSLGKNKTSEDAVADLREGVKKLGRFADFLVVNLSSPNTPGLRSLQSASHLAAIIDGVQE 392
Query: 170 T---------------------------------RNQLAVKPLPPILVKIAPDLSLDEKK 196
NQ +PL VKIAPDLS++EK+
Sbjct: 393 ELDALDRQAQAASQKQRNERRRHGGNPEETKAFYANQTGRRPL--FFVKIAPDLSMEEKE 450
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
IA V L+ +DG +VSNTT+ R E L + K ETGGLSG L++ ST +S+MYKLT
Sbjct: 451 SIAKVALEKN--LDGFVVSNTTIQRPETLKSPAKSETGGLSGRALKHLSTACVSDMYKLT 508
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+GKL II GGV SG+DA +KI+AGASLV++Y+S VY GP + R+K+EL L ++GY
Sbjct: 509 QGKLAIIATGGVESGRDALDKIEAGASLVELYSSMVYIGPQVARRVKNELYHALNEKGYK 568
Query: 317 SVSQAVGAAHK 327
V+ AVG HK
Sbjct: 569 DVAAAVGRKHK 579
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 35/110 (31%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET----------------- 90
G+ K G A + VVN+SSPNT LR LQ+ L ++ V E
Sbjct: 351 GVKKLGRFADFLVVNLSSPNTPGLRSLQSASHLAAIIDGVQEELDALDRQAQAASQKQRN 410
Query: 91 ----------------RNQLALKPLPPILVKIAPDLSLDEKKDIADVVLD 124
NQ +PL VKIAPDLS++EK+ IA V L+
Sbjct: 411 ERRRHGGNPEETKAFYANQTGRRPL--FFVKIAPDLSMEEKESIAKVALE 458
>gi|297603558|ref|NP_001054255.2| Os04g0676300 [Oryza sativa Japonica Group]
gi|255675879|dbj|BAF16169.2| Os04g0676300 [Oryza sativa Japonica Group]
Length = 601
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 133/197 (67%), Gaps = 5/197 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNT LRKLQ + QLK L+K V
Sbjct: 335 VNLGKNKISEDATADYVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQA 394
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ Q A PP+LVKIAPDLS + +DIA V L ++DGLI+SNTT+ R D
Sbjct: 395 ARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVAL--ALRLDGLIISNTTISRPSPADT 452
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E GGLSG+PL + ST ++ EMY LT+GK+P+IG GGV SG+DA++KI++GA+LVQ
Sbjct: 453 HPLAQEAGGLSGKPLFDLSTNVLREMYILTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQ 512
Query: 287 IYTSFVYHGPPLVTRIK 303
+YT+F Y GP L+ RIK
Sbjct: 513 LYTAFAYGGPALIPRIK 529
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ A Y V+NVSSPNT LRKLQ + QLK L+K V R+ Q A PP+
Sbjct: 350 YVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQAARDEMQWAEDGPPPL 409
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS + +DIA V L
Sbjct: 410 LVKIAPDLSKQDLEDIAAVAL 430
>gi|326432093|gb|EGD77663.1| dihydroorotate dehydrogenase [Salpingoeca sp. ATCC 50818]
Length = 424
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 140/220 (63%), Gaps = 7/220 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K + LD G+ A Y VVNVSSPNT LR LQ + L LL V
Sbjct: 200 VNLGKNKTQDNAALDYCAGMRALAPYADYVVVNVSSPNTPGLRALQGRAALSRLLGEVKR 259
Query: 170 TRNQL--AVKP---LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY 224
TR+ L + +P PP+LVKIAPDL+ + DI VV + +DG+IVSNTT+ R
Sbjct: 260 TRDSLDFSSRPGASPPPLLVKIAPDLTDQDIDDIVAVV--KEIGIDGIIVSNTTIARPAS 317
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L + ++EE GGLSG PLR+ ST +++++Y T G +P+IGVGGV DA+ KI++GASL
Sbjct: 318 LQSEHREEGGGLSGRPLRDASTAVLAKVYAKTGGSVPLIGVGGVSCAADAYAKIRSGASL 377
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VQ+YT+ GP +V IK +L +LL +G++SVS AVGA
Sbjct: 378 VQLYTAMAIEGPGVVHAIKRDLPQLLAADGFSSVSAAVGA 417
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KP---L 99
+ G+ A Y VVNVSSPNT LR LQ + L LL V TR+ L +P
Sbjct: 215 YCAGMRALAPYADYVVVNVSSPNTPGLRALQGRAALSRLLGEVKRTRDSLDFSSRPGASP 274
Query: 100 PPILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
PP+LVKIAPDL+ + DI VV + + GI+
Sbjct: 275 PPLLVKIAPDLTDQDIDDIVAVVKEIGIDGII 306
>gi|163796308|ref|ZP_02190269.1| Dihydroorotate dehydrogenase [alpha proteobacterium BAL199]
gi|159178450|gb|EDP62992.1| Dihydroorotate dehydrogenase [alpha proteobacterium BAL199]
Length = 357
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V G+ + +A Y +NVSSPNT LR LQ + L LL ++
Sbjct: 137 INIGANKDTADPVDDYVMGMRQLAPLADYVTINVSSPNTPGLRDLQGEGPLGRLLTAALQ 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R ++ + PP+L+KIAPDL+ + + I + + C VDGLIVSNTT+ R + L +R
Sbjct: 197 VRTEVCREAGPPVLLKIAPDLADGQLQAIVETAV--ACGVDGLIVSNTTIARPDSLQSRS 254
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PL + ST +++ +++ G+LP++GVGG+ G A+ KI+AGA LVQ+YT
Sbjct: 255 RSEPGGLSGRPLFSPSTRVLARAFRVAAGRLPLVGVGGIEDGATAYAKIRAGARLVQLYT 314
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP L RI+ +L L +G + AVG
Sbjct: 315 ALVYKGPGLFRRIRDDLAARLAADGLTRIEDAVG 348
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++G+ + +A Y +NVSSPNT LR LQ + L LL ++ R ++ + PP+L+
Sbjct: 152 YVMGMRQLAPLADYVTINVSSPNTPGLRDLQGEGPLGRLLTAALQVRTEVCREAGPPVLL 211
Query: 105 KIAPDLS 111
KIAPDL+
Sbjct: 212 KIAPDLA 218
>gi|401400343|ref|XP_003880770.1| putative dihydroorotate dehydrogenase [Neospora caninum Liverpool]
gi|325115181|emb|CBZ50737.1| putative dihydroorotate dehydrogenase [Neospora caninum Liverpool]
Length = 585
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 154/283 (54%), Gaps = 38/283 (13%)
Query: 75 QAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGD 134
+ D + L+ ETR + P + +SL + K D V D +G+ K G
Sbjct: 298 KGADYAQQQLERFAETRKK------DPFTAQGVLGVSLGKNKTSTDAVADLREGVRKLGR 351
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL------AVKP---------- 178
A + +VN+SSPNT LR LQ+ L ++ V E + L A P
Sbjct: 352 FADFLIVNLSSPNTPGLRSLQSASHLAAIIDAVHEELDALDTMAAAAGTPRGAREDAAAT 411
Query: 179 --------------LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY 224
P VKI+PDL+++EK+ IA V LD +DG +VSNTT+ R E
Sbjct: 412 AARSTAFYANQTGKCPLFFVKISPDLTMEEKESIAKVALDKN--LDGFVVSNTTIQRPET 469
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L K ETGGLSG L+N ST +S+MYKLT+GKL II GGV SG+DA +KI+AGASL
Sbjct: 470 LKDPSKTETGGLSGRALKNLSTACVSDMYKLTQGKLVIIATGGVESGRDALDKIEAGASL 529
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
V++Y+S +Y GP + R+K+EL L ++GY V+ AVG H+
Sbjct: 530 VELYSSMIYLGPQVARRVKNELYCALNEKGYKDVAAAVGRKHR 572
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 30/107 (28%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL------ALKP--- 98
G+ K G A + +VN+SSPNT LR LQ+ L ++ V E + L A P
Sbjct: 345 GVRKLGRFADFLIVNLSSPNTPGLRSLQSASHLAAIIDAVHEELDALDTMAAAAGTPRGA 404
Query: 99 ---------------------LPPILVKIAPDLSLDEKKDIADVVLD 124
P VKI+PDL+++EK+ IA V LD
Sbjct: 405 REDAAATAARSTAFYANQTGKCPLFFVKISPDLTMEEKESIAKVALD 451
>gi|291229833|ref|XP_002734875.1| PREDICTED: DiHydroOrotate Dehydrogenas family member (dhod-1)-like,
partial [Saccoglossus kowalevskii]
Length = 160
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 122/157 (77%), Gaps = 2/157 (1%)
Query: 167 VVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
V+ R+ L KP PIL+KIAPDL+ +K+DIA V+ + K KVDGLIVSNTT+ R + L
Sbjct: 1 VIAARDALNRKP--PILIKIAPDLTEKDKEDIAAVISNEKFKVDGLIVSNTTITRPDTLT 58
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ K ETGGLSG PL+ ST + +MYKLT+G++PIIGVGG+ +G+DA+EKI+AGASLVQ
Sbjct: 59 SPEKGETGGLSGPPLKELSTNTLKDMYKLTQGEIPIIGVGGISNGQDAYEKIRAGASLVQ 118
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+YTS Y GPP+V +IK EL LL+K+G+ SVS+AVG
Sbjct: 119 LYTSLTYQGPPVVKKIKQELVLLLKKDGFQSVSEAVG 155
>gi|374323254|ref|YP_005076383.1| dihydroorotate dehydrogenase 2 [Paenibacillus terrae HPL-003]
gi|357202263|gb|AET60160.1| dihydroorotate dehydrogenase 2 [Paenibacillus terrae HPL-003]
Length = 364
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 153/238 (64%), Gaps = 14/238 (5%)
Query: 95 ALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKL 154
ALK P V +A ++ ++ D D K I A +FVVN+SSPNT +LRKL
Sbjct: 136 ALKHRP---VPVAVNIGKNKNTPNEDAHKDYEKCISALYPYADFFVVNISSPNTPDLRKL 192
Query: 155 QAKDQLKHLLKTVVETRNQLAVKPLP-----PILVKIAPDLSLDEKKDIADVVLDSKCKV 209
Q +LK LL+ V R ++ V+ +LVKIAPD+S +E + + D + S V
Sbjct: 193 QHGSELKSLLEAV---RAEMGVQATKYGGAKSVLVKIAPDVSDEELEYMTDAIAASG--V 247
Query: 210 DGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVF 269
DG+I +NTT+ R L R ETGGLSG+PLR++STE+I +Y+ T GKLPIIG GG+F
Sbjct: 248 DGIIATNTTISRAG-LTHRNASETGGLSGKPLRDRSTEVIGRVYRQTDGKLPIIGSGGIF 306
Query: 270 SGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
S +DA++KIKAGASL++IYT+ +Y GP + + + L ELL+K+G+ +++AVGA H+
Sbjct: 307 SSRDAYDKIKAGASLIEIYTALIYEGPEVNRTLHAGLRELLRKDGFRHITEAVGADHR 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A +FVVN+SSPNT +LRKLQ +LK LL+ V A K +LVKIAPD+S +
Sbjct: 174 ADFFVVNISSPNTPDLRKLQHGSELKSLLEAVRAEMGVQATKYGGAKSVLVKIAPDVSDE 233
Query: 114 EKKDIADVVLDS-VKGIL 130
E + + D + S V GI+
Sbjct: 234 ELEYMTDAIAASGVDGII 251
>gi|325283483|ref|YP_004256024.1| Dihydroorotate dehydrogenase [Deinococcus proteolyticus MRP]
gi|324315292|gb|ADY26407.1| Dihydroorotate dehydrogenase [Deinococcus proteolyticus MRP]
Length = 363
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 150/237 (63%), Gaps = 10/237 (4%)
Query: 91 RNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTAN 150
R LA L P+ V I + + +D A D + + + VA FVVNVSSPNT
Sbjct: 131 RRHLAGPRLCPVWVNIGKN-KVTPNEDAAS---DYRRCVAELYPVADAFVVNVSSPNTPG 186
Query: 151 LRKLQAKDQLKHLLKTVVETRNQLAVKP---LPPILVKIAPDLSLDEKKDIADVVLDSKC 207
LR LQA L+ L++ V++ + V+ LPP+LVK+APDL + + D VL +
Sbjct: 187 LRALQAASDLEALVREVMDEAERQRVRTALRLPPVLVKLAPDLHPADFEASVDAVLAAGA 246
Query: 208 KVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGG 267
+GLI+SNTT+ R E L + ++ E GGLSG PLR +STEL+ Y+ +G++PI+GVGG
Sbjct: 247 --NGLIISNTTLSR-EGLRSEHRAEAGGLSGLPLRERSTELVRLGYQQARGRVPIVGVGG 303
Query: 268 VFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+F+ +DAFEKI AGASLV++Y+ +Y GP L I L ELL++EG+ SV++AVGA
Sbjct: 304 IFTAQDAFEKILAGASLVEVYSGLIYGGPTLPAEISRGLAELLRREGFRSVTEAVGA 360
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE----TRNQLALKPLPPILVKIAPDL 110
VA FVVNVSSPNT LR LQA L+ L++ V++ R + AL+ LPP+LVK+APDL
Sbjct: 171 VADAFVVNVSSPNTPGLRALQAASDLEALVREVMDEAERQRVRTALR-LPPVLVKLAPDL 229
Query: 111 SLDEKKDIADVVL 123
+ + D VL
Sbjct: 230 HPADFEASVDAVL 242
>gi|10177819|dbj|BAB11185.1| dihydroorotate dehydrogenase precursor [Arabidopsis thaliana]
Length = 441
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNTA LR LQ + QLK L+K V
Sbjct: 242 VNLGKNKTSEDAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQA 301
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-D 226
R+ Q + PP+LVKIAPDLS E +DIA V L +DGLI+SNTTV R + + +
Sbjct: 302 ARDEMQWGDEGPPPLLVKIAPDLSRGELEDIAAVAL--ALHLDGLIISNTTVSRPDAVSN 359
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL ST ++ +MY LT+GK+P+IG GGV SG+DA++KI+AGA+LVQ
Sbjct: 360 NPVATETGGLSGKPLFALSTNMLRDMYTLTRGKIPLIGCGGVSSGEDAYKKIRAGATLVQ 419
Query: 287 IYTSFVYHGPPLVTRIK 303
+YT F Y GP L+ +IK
Sbjct: 420 LYTGFAYGGPALIPQIK 436
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPI 102
++ G+ A Y V+NVSSPNTA LR LQ + QLK L+K V R+++ + PP+
Sbjct: 257 YVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQAARDEMQWGDEGPPPL 316
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS E +DIA V L
Sbjct: 317 LVKIAPDLSRGELEDIAAVAL 337
>gi|375308037|ref|ZP_09773324.1| dihydroorotate dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375080368|gb|EHS58589.1| dihydroorotate dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 351
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 158/248 (63%), Gaps = 16/248 (6%)
Query: 85 KTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVS 144
+++ E L +P+P +A ++ ++ D D K I A +FVVN+S
Sbjct: 115 ESMAERLAALKHRPVP-----VAVNIGKNKTTPNEDAHKDYEKCISALYPYAAFFVVNIS 169
Query: 145 SPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-----LPPILVKIAPDLSLDEKKDIA 199
SPNT +LRKLQ +LK LL+ V R ++ V+ +LVKIAPD+S +E + +
Sbjct: 170 SPNTPDLRKLQHGSELKSLLEAV---RAEMGVQAAKYGETKSVLVKIAPDVSDEELEYMT 226
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
D + S VDG+I +NTT+ R L R ETGGLSG+PLR++STE+I +Y+ T+GK
Sbjct: 227 DAIAASG--VDGIIATNTTISRAG-LTHRNASETGGLSGKPLRDRSTEVIGRVYRQTEGK 283
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
LPIIG GG+F+ +DA++KIKAGASL++IYT+ +Y GP + + + L ELL+K+G+ ++
Sbjct: 284 LPIIGSGGIFTSRDAYDKIKAGASLIEIYTALIYEGPEVNRALHAGLRELLRKDGFRRIT 343
Query: 320 QAVGAAHK 327
+AVGA H+
Sbjct: 344 EAVGADHR 351
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A +FVVN+SSPNT +LRKLQ +LK LL+ V A K +LVKIAPD+S +
Sbjct: 161 AAFFVVNISSPNTPDLRKLQHGSELKSLLEAVRAEMGVQAAKYGETKSVLVKIAPDVSDE 220
Query: 114 EKKDIADVVLDS-VKGIL 130
E + + D + S V GI+
Sbjct: 221 ELEYMTDAIAASGVDGII 238
>gi|58584359|ref|YP_197932.1| dihydroorotate dehydrogenase 2 [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418675|gb|AAW70690.1| Dihydroorotate dehydrogenase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 346
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
+ Y V+N+SSPNT NLR L + +L LLK++ TR + PI++KI+PD+ K
Sbjct: 158 SSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIMLKISPDIDQQTK 217
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
+DIA + L+ K +DGL +SNTTV R + L + + E+GGLSG PL STEL+S++YKL
Sbjct: 218 EDIAGLALEYK--IDGLTISNTTVSR-DNLHSHH-NESGGLSGRPLFKLSTELLSDIYKL 273
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T+GK+ +IG GG+ SG DA++KIKAGASLVQ+YT+ +YHGP V +I EL EL++K+G
Sbjct: 274 TQGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPRAVNKINLELAELVRKDGL 333
Query: 316 NSVSQAVGA 324
+++ +AVG
Sbjct: 334 SNIGEAVGC 342
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
+ Y V+N+SSPNT NLR L + +L LLK++ TR + PI++KI+PD+ K
Sbjct: 158 SSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIMLKISPDIDQQTK 217
Query: 116 KDIADVVLD 124
+DIA + L+
Sbjct: 218 EDIAGLALE 226
>gi|328544880|ref|YP_004304989.1| dihydroorotate dehydrogenase 2 [Polymorphum gilvum SL003B-26A1]
gi|326414622|gb|ADZ71685.1| Dihydroorotate dehydrogenase 2 [Polymorphum gilvum SL003B-26A1]
Length = 341
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 139/217 (64%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V GI +F D+A YF VNVSSPNT LR LQA+ L LL V+
Sbjct: 116 VNVGANKDSADRVADYVAGIRRFADLASYFTVNVSSPNTPGLRDLQARSSLHELLVRVIT 175
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A + P+L+KI+PD+ +DIA+ V + VDGLIVSNTTV R +
Sbjct: 176 ARDEEARRIGRAVPVLLKISPDVDQQALEDIAEEV--TATAVDGLIVSNTTVSRAGLTER 233
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ +E GGLSG PL KST +++ M KL LPIIGVGG+ S + A+ KI AGA+L+Q+
Sbjct: 234 HHAQEAGGLSGRPLFRKSTIVLARMRKLVGPSLPIIGVGGIDSPQAAWTKITAGATLLQL 293
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y++ VY GP LV RI + L L++ G +S++ A GA
Sbjct: 294 YSALVYEGPGLVGRILAHLSTELERNGLDSLADACGA 330
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI +F D+A YF VNVSSPNT LR LQA+ L LL V+ R++ A + P+
Sbjct: 131 YVAGIRRFADLASYFTVNVSSPNTPGLRDLQARSSLHELLVRVITARDEEARRIGRAVPV 190
Query: 103 LVKIAPDLSLDEKKDIA-DVVLDSVKGIL 130
L+KI+PD+ +DIA +V +V G++
Sbjct: 191 LLKISPDVDQQALEDIAEEVTATAVDGLI 219
>gi|308068493|ref|YP_003870098.1| dihydroorotate dehydrogenase [Paenibacillus polymyxa E681]
gi|305857772|gb|ADM69560.1| Dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase)
(DHODase) (DHOD) [Paenibacillus polymyxa E681]
Length = 364
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 139/197 (70%), Gaps = 11/197 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-----LPPILVKIAPDL 190
A +FVVN+SSPNT +LRKLQ +LK LL+ V R ++ V+ +LVKIAPD+
Sbjct: 174 ADFFVVNISSPNTPDLRKLQHGHELKSLLEAV---RAEMGVQAKKYGNAKSVLVKIAPDV 230
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELIS 250
S +E + + D + S VDG+I +NTT+ R L R ETGGLSG+PLR++STE+I
Sbjct: 231 SDEELEYMTDAIAASG--VDGIIATNTTISRAG-LTHRNASETGGLSGKPLRDRSTEVIG 287
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
+Y+ T+GKLPIIG GG+F+ +DA++KIKAGASL++IYT+ +Y GP + I + L E+L
Sbjct: 288 RVYRQTEGKLPIIGSGGIFTSRDAYDKIKAGASLIEIYTALIYEGPEVNRAIHAGLREML 347
Query: 311 QKEGYNSVSQAVGAAHK 327
+K+G+ +++AVGA H+
Sbjct: 348 RKDGFRHITEAVGADHR 364
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-----LPPILVKIAPDL 110
A +FVVN+SSPNT +LRKLQ +LK LL+ V R ++ ++ +LVKIAPD+
Sbjct: 174 ADFFVVNISSPNTPDLRKLQHGHELKSLLEAV---RAEMGVQAKKYGNAKSVLVKIAPDV 230
Query: 111 SLDEKKDIADVVLDS-VKGIL 130
S +E + + D + S V GI+
Sbjct: 231 SDEELEYMTDAIAASGVDGII 251
>gi|390456478|ref|ZP_10242006.1| dihydroorotate dehydrogenase 2 [Paenibacillus peoriae KCTC 3763]
Length = 364
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 139/197 (70%), Gaps = 11/197 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-----PILVKIAPDL 190
A +FVVN+SSPNT +LRKLQ +LK LL+ V R ++ V+ +LVKIAPD+
Sbjct: 174 ADFFVVNISSPNTPDLRKLQHGSELKSLLEAV---RAEMGVQAAKYGEAKSVLVKIAPDV 230
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELIS 250
S +E + + D + S VDG+I +NTT+ R L R ETGGLSG+PLR++STE+I
Sbjct: 231 SDEELEYMTDAIAASG--VDGIIATNTTISRAG-LTHRNASETGGLSGKPLRDRSTEVIG 287
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
+Y+ T+GKLPIIG GG+F+ +DA++KIKAGASL++IYT+ +Y GP + + + L ELL
Sbjct: 288 RVYRQTEGKLPIIGSGGIFTSRDAYDKIKAGASLIEIYTALIYEGPEVNRALHAGLRELL 347
Query: 311 QKEGYNSVSQAVGAAHK 327
+K+G+ +++AVGA H+
Sbjct: 348 RKDGFRHITEAVGADHR 364
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A +FVVN+SSPNT +LRKLQ +LK LL+ V A K +LVKIAPD+S +
Sbjct: 174 ADFFVVNISSPNTPDLRKLQHGSELKSLLEAVRAEMGVQAAKYGEAKSVLVKIAPDVSDE 233
Query: 114 EKKDIADVVLDS-VKGIL 130
E + + D + S V GI+
Sbjct: 234 ELEYMTDAIAASGVDGII 251
>gi|407779751|ref|ZP_11127004.1| dihydroorotate dehydrogenase 2 [Nitratireductor pacificus pht-3B]
gi|407298521|gb|EKF17660.1| dihydroorotate dehydrogenase 2 [Nitratireductor pacificus pht-3B]
Length = 364
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ FGD+A Y VN+SSPNTA LR LQ +D L LL V+
Sbjct: 140 INIGANKDSADRIADYETGVRAFGDIASYLTVNISSPNTAGLRTLQDRDNLAELLARVLA 199
Query: 170 TRNQLAVK---PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
R+++A + P+P + +KIAPDL+ + DIA VLD + +DGLIVSNTT+ R
Sbjct: 200 ARDEVAKRRRSPVP-LFLKIAPDLTDEALSDIAAEVLDQR--IDGLIVSNTTLSR-RGAT 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+R +ETGGLSG+PL +ST ++++M +L +P+IGVGG+ SG+ A EKI+AGA L+Q
Sbjct: 256 SRKAQETGGLSGQPLFERSTIVLAKMRRLVGPAMPLIGVGGIHSGETALEKIRAGADLIQ 315
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
IY+ ++ G L RI +EL Q+EG +S+ Q
Sbjct: 316 IYSGMIFGGACLPARIVTELGTYAQREGLSSLRQ 349
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK---PLPPILV 104
G+ FGD+A Y VN+SSPNTA LR LQ +D L LL V+ R+++A + P+ P+ +
Sbjct: 158 GVRAFGDIASYLTVNISSPNTAGLRTLQDRDNLAELLARVLAARDEVAKRRRSPV-PLFL 216
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDL+ + DIA VLD
Sbjct: 217 KIAPDLTDEALSDIAAEVLD 236
>gi|261408375|ref|YP_003244616.1| dihydroorotate dehydrogenase 2 [Paenibacillus sp. Y412MC10]
gi|261284838|gb|ACX66809.1| dihydroorotate dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 370
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 149/229 (65%), Gaps = 9/229 (3%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V I + + +K D ++ + +GD +FVVN+SSPNT +LR LQ +L
Sbjct: 149 PVAVNIGKNKATPNEK-ANDDYEACIQALFPYGD---FFVVNISSPNTPDLRSLQHGSEL 204
Query: 161 KHLLKTVVE--TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
LL+ V+ +R +LVKIAPD+S +E + + D + S V G+I +NTT
Sbjct: 205 SSLLEAVMNEMSRQAKIHGGEKAVLVKIAPDVSDEELEFMVDTI--SASGVSGIIATNTT 262
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ R + L +ETGGLSG+PLRN+STE++S +YK T G LPIIG GG+F+ +DA++KI
Sbjct: 263 LSR-DGLTHSNAKETGGLSGKPLRNRSTEIVSRIYKQTGGSLPIIGSGGIFTARDAYDKI 321
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+AGASLV+IYT+ +Y GP + ++ S L ELL +EG++ +S+AVGA H+
Sbjct: 322 RAGASLVEIYTALIYEGPEVNRKLHSGLRELLAREGFSHISEAVGANHR 370
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE--TRNQLALKPLPPILVKI 106
+ +GD +FVVN+SSPNT +LR LQ +L LL+ V+ +R +LVKI
Sbjct: 176 LFPYGD---FFVVNISSPNTPDLRSLQHGSELSSLLEAVMNEMSRQAKIHGGEKAVLVKI 232
Query: 107 APDLSLDEKKDIADVVLDS-VKGIL 130
APD+S +E + + D + S V GI+
Sbjct: 233 APDVSDEELEFMVDTISASGVSGII 257
>gi|307108614|gb|EFN56854.1| hypothetical protein CHLNCDRAFT_22067 [Chlorella variabilis]
Length = 409
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 141/229 (61%), Gaps = 16/229 (6%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D G+ K G A Y V+N+SSPNT + Q L LL
Sbjct: 164 VNLGKNKTSEDAAADYRVGVTKLGPFADYLVINISSPNTPGTCR-QPGTMLLILLLIPAC 222
Query: 170 TRNQL-----------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
TR+ + P PP+LVKIAPDL+ + DIA V L VDGLIVSNTT
Sbjct: 223 TRDSMRWPASDSMSWMEAGP-PPLLVKIAPDLTEADMADIAAVALQQG--VDGLIVSNTT 279
Query: 219 VDRYEYL-DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
+ R + + +E GGLSG PL + ST ++ +MY LT GKLPIIGVGGV SG+DA+ K
Sbjct: 280 ITRPGPIGEHATGKEAGGLSGRPLFDMSTRVLRDMYTLTGGKLPIIGVGGVSSGEDAYAK 339
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
I+AGASLV++Y++F + GP LV R+K EL LL+++GY SV++AVGA H
Sbjct: 340 IRAGASLVELYSAFAFEGPKLVPRVKRELAALLERDGYASVAEAVGADH 388
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP------ 98
+ +G+ K G A Y V+N+SSPNT + Q L LL TR+ +
Sbjct: 179 YRVGVTKLGPFADYLVINISSPNTPGTCR-QPGTMLLILLLIPACTRDSMRWPASDSMSW 237
Query: 99 ----LPPILVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
PP+LVKIAPDL+ + DIA V L V G++
Sbjct: 238 MEAGPPPLLVKIAPDLTEADMADIAAVALQQGVDGLI 274
>gi|85709846|ref|ZP_01040911.1| dihydroorotate dehydrogenase [Erythrobacter sp. NAP1]
gi|85688556|gb|EAQ28560.1| dihydroorotate dehydrogenase [Erythrobacter sp. NAP1]
Length = 355
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 139/215 (64%), Gaps = 3/215 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D D + A Y VNVSSPNT LR LQ + L L+ V+E
Sbjct: 143 INIGANKDSEDRTADYAEMARLMAPYASYLAVNVSSPNTPGLRALQDEAALAGLIDAVIE 202
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R Q + +PPI +K+APDL D+ IA + +D K LIVSNTT+ R + L +R+
Sbjct: 203 ARGQAETETVPPIFLKVAPDLEYDDIDAIARIAIDKKLGA--LIVSNTTISRPD-LRSRH 259
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSGEPLR + E + + K T G++P++GVGG+ + + A+++I+AGASLVQ+Y+
Sbjct: 260 ANETGGLSGEPLRAMALERVRDFRKATGGEMPLVGVGGIATAEHAWQRIRAGASLVQLYS 319
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP L ++I S LE L++++G++S+++AVG+
Sbjct: 320 AMVYEGPGLGSQIVSGLERLMKRDGFSSIAEAVGS 354
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VNVSSPNT LR LQ + L L+ V+E R Q + +PPI +K+APDL D+
Sbjct: 169 ASYLAVNVSSPNTPGLRALQDEAALAGLIDAVIEARGQAETETVPPIFLKVAPDLEYDDI 228
Query: 116 KDIADVVLDSVKGIL 130
IA + +D G L
Sbjct: 229 DAIARIAIDKKLGAL 243
>gi|291000214|ref|XP_002682674.1| predicted protein [Naegleria gruberi]
gi|284096302|gb|EFC49930.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 142/217 (65%), Gaps = 9/217 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K + + D + G+ K A + V+NVSSPNT +LR LQ K L L++ E +L
Sbjct: 152 KTSAPESIEDYLIGVRKLAKHADFLVINVSSPNTQHLRSLQEKSSLDTLIE---EVSTEL 208
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR----YEYLDARYK 230
P+L+KIAPDL+LD+++DIA + L K + G+IVSNTT++R E ++A
Sbjct: 209 KKHKNIPLLIKIAPDLTLDQQRDIASLAL--KHSIGGIIVSNTTIERPFVSSEQINAIPN 266
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
GG+SG PL N+ST+++ MYKLT+GK+ +IGVGGV+ G DA +KI+AGASLVQ+YT+
Sbjct: 267 GSAGGMSGRPLFNQSTKVLKNMYKLTEGKVTLIGVGGVWDGYDALQKIQAGASLVQVYTA 326
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
F GP +V +IK EL +LL + GY VS AVG+ K
Sbjct: 327 FTAQGPAVVGKIKRELAQLLAEGGYARVSDAVGSKAK 363
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
++ +L+G+ K A + V+NVSSPNT +LR LQ K L L++ E +L P
Sbjct: 159 IEDYLIGVRKLAKHADFLVINVSSPNTQHLRSLQEKSSLDTLIE---EVSTELKKHKNIP 215
Query: 102 ILVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+L+KIAPDL+LD+++DIA + L S+ GI+
Sbjct: 216 LLIKIAPDLTLDQQRDIASLALKHSIGGII 245
>gi|251796163|ref|YP_003010894.1| dihydroorotate dehydrogenase [Paenibacillus sp. JDR-2]
gi|247543789|gb|ACT00808.1| dihydroorotate dehydrogenase [Paenibacillus sp. JDR-2]
Length = 365
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 139/199 (69%), Gaps = 9/199 (4%)
Query: 132 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK---PLPPILVKIAP 188
+GD +FVVN+SSPNT +LR LQ D+L+ LL V+E A K P+LVKIAP
Sbjct: 173 YGD---FFVVNISSPNTPDLRALQHGDELRTLLGEVLEEIGLQASKLGSKAKPVLVKIAP 229
Query: 189 DLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTEL 248
D++ ++ + + DS V G+I SNTT+ R E L +ETGGLSG PLR +STE+
Sbjct: 230 DMTDEQLELTVSTIKDSG--VAGIIASNTTITR-EGLKHPNAKETGGLSGAPLRERSTEV 286
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+LT+GKLPIIG GG+F+ DA++KI+AGASLV+IYT+ +Y GP ++ + + L+E
Sbjct: 287 IRSVYRLTEGKLPIIGSGGIFTADDAYDKIRAGASLVEIYTALIYKGPGVLRELTNGLKE 346
Query: 309 LLQKEGYNSVSQAVGAAHK 327
L+K+GY +VS+AVGA H+
Sbjct: 347 RLRKDGYRNVSEAVGADHR 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK---PLPPILVKIAP 108
+GD +FVVN+SSPNT +LR LQ D+L+ LL V+E A K P+LVKIAP
Sbjct: 173 YGD---FFVVNISSPNTPDLRALQHGDELRTLLGEVLEEIGLQASKLGSKAKPVLVKIAP 229
Query: 109 DLSLDEKKDIADVVLDS-VKGIL 130
D++ ++ + + DS V GI+
Sbjct: 230 DMTDEQLELTVSTIKDSGVAGII 252
>gi|260433048|ref|ZP_05787019.1| dihydroorotate oxidase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416876|gb|EEX10135.1| dihydroorotate oxidase [Silicibacter lacuscaerulensis ITI-1157]
Length = 352
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 143/215 (66%), Gaps = 5/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD +D D + + G + VNVSSPNT LR LQ K+ L LL V++
Sbjct: 137 LNLGANKDSSDRARDFAQVLAHCGQWLDFATVNVSSPNTEKLRDLQGKEALSALLAGVLD 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR+ LA +P+P + +KIAPDL+ DE +DIADV D+ +DG+I +NTT+ R E L + +
Sbjct: 197 TRDALA-RPIP-VFLKIAPDLTDDELRDIADVARDTG--IDGVIATNTTLSR-EGLRSPH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K++ GGLSG PL KST +++ + +LT G++P+IGVGG+ + + A+ KI AGAS VQ YT
Sbjct: 252 KDQAGGLSGAPLFEKSTRVLARLSQLTDGQIPLIGVGGIGTAEQAYAKICAGASAVQFYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G L T I L+ LL ++G+NSV+ AVG+
Sbjct: 312 AMVYGGLSLATEIAQGLDALLARDGFNSVADAVGS 346
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K+ L LL V++TR+ LA +P+ P+ +KIAPDL+ DE +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKEALSALLAGVLDTRDALA-RPI-PVFLKIAPDLTDDELRD 222
Query: 118 IADVVLDS-VKGIL 130
IADV D+ + G++
Sbjct: 223 IADVARDTGIDGVI 236
>gi|329929382|ref|ZP_08283130.1| dihydroorotate oxidase [Paenibacillus sp. HGF5]
gi|328936469|gb|EGG32914.1| dihydroorotate oxidase [Paenibacillus sp. HGF5]
Length = 370
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 9/229 (3%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V I + + +K D ++ + +GD +FVVN+SSPNT +LR LQ +L
Sbjct: 149 PVAVNIGKNKATPNEKANDDYEA-CIQALFPYGD---FFVVNISSPNTPDLRSLQHGSEL 204
Query: 161 KHLLKTVVE--TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
LL+ V+ +R +LVKIAPD+S +E + + D + S V G+I +NTT
Sbjct: 205 SSLLEAVMNEMSRQAKIHGGEKAVLVKIAPDVSDEELEFMVDTI--SASGVSGIIATNTT 262
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ R + L +ETGGLSG+PLRN+STE++S +YK T G LPIIG GG+F+ +DA++KI
Sbjct: 263 LSR-DGLTHSNAKETGGLSGKPLRNRSTEIVSRIYKQTGGSLPIIGSGGIFTARDAYDKI 321
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+AGASLV+IYT+ +Y GP + ++ S L ELL ++G++ +S+AVGA H+
Sbjct: 322 RAGASLVEIYTALIYEGPEVNRKLHSGLRELLARDGFSHISEAVGANHR 370
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE--TRNQLALKPLPPILVKI 106
+ +GD +FVVN+SSPNT +LR LQ +L LL+ V+ +R +LVKI
Sbjct: 176 LFPYGD---FFVVNISSPNTPDLRSLQHGSELSSLLEAVMNEMSRQAKIHGGEKAVLVKI 232
Query: 107 APDLSLDEKKDIADVVLDS-VKGIL 130
APD+S +E + + D + S V GI+
Sbjct: 233 APDVSDEELEFMVDTISASGVSGII 257
>gi|315648482|ref|ZP_07901581.1| dihydroorotate dehydrogenase 2 [Paenibacillus vortex V453]
gi|315276176|gb|EFU39522.1| dihydroorotate dehydrogenase 2 [Paenibacillus vortex V453]
Length = 366
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 151/232 (65%), Gaps = 15/232 (6%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V I + + +K D ++ + +GD +FVVN+SSPNT +LR LQ +L
Sbjct: 145 PVAVNIGKNKATPNEKANGDYEA-CIQALFPYGD---FFVVNISSPNTPDLRSLQHGSEL 200
Query: 161 KHLLKTVVETRNQLAVKPL-----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
LL+ V +N+++ + +LVKIAPD+S E + + D + S V G+I +
Sbjct: 201 ASLLEAV---KNEMSRQAQIHGGDKAVLVKIAPDVSDAELEFMVDTI--STSGVSGIIAT 255
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NTT+ R E L + +ETGGLSG+PLR +STE++S +YK T G LPIIG GG+F+ +DA+
Sbjct: 256 NTTLSR-EGLTHGHAKETGGLSGKPLRERSTEIVSRIYKQTGGSLPIIGSGGIFTARDAY 314
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+KI+AGASLV+IYT+ +Y GP + ++ S L +LL ++G+N +S+AVGA H+
Sbjct: 315 DKIRAGASLVEIYTALIYEGPEVNRKLHSGLRDLLARDGFNHISEAVGANHR 366
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-----PPIL 103
+ +GD +FVVN+SSPNT +LR LQ +L LL+ V +N+++ + +L
Sbjct: 172 LFPYGD---FFVVNISSPNTPDLRSLQHGSELASLLEAV---KNEMSRQAQIHGGDKAVL 225
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGIL 130
VKIAPD+S E + + D + S V GI+
Sbjct: 226 VKIAPDVSDAELEFMVDTISTSGVSGII 253
>gi|328773685|gb|EGF83722.1| hypothetical protein BATDEDRAFT_84444 [Batrachochytrium
dendrobatidis JAM81]
Length = 498
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 134/206 (65%), Gaps = 5/206 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D + GI F A Y V+N+SSPNT LR LQ ++ ++ LL + R+ L P++
Sbjct: 295 DYIDGIATFSKYADYMVINISSPNTPGLRSLQRRESIERLLMSAKRERDALPQNHQSPLV 354
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--DARYKEETGGLSGEPL 241
VKI+PDL+ +E KDIADVV+ +DG+I+SNTT+ R L D+ KE+TGGLSG P+
Sbjct: 355 VKISPDLNAEELKDIADVVM--HVGMDGVIISNTTISRSMSLRSDSNLKEQTGGLSGVPI 412
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
S +SE YK T+G++PIIG GG+ +G+DA KAGA+++Q+YT+ Y GP LV
Sbjct: 413 LPLSLHAVSEFYKFTQGRIPIIGCGGIQTGEDAINFAKAGATVIQVYTALGYQGPGLVHD 472
Query: 302 IKSELEELLQKEGYNSVSQAVGAAHK 327
IK E E+L++EG + SQ +G+ H
Sbjct: 473 IKREATEILKREG-KTWSQMIGSNHN 497
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI 102
Q ++ GI F A Y V+N+SSPNT LR LQ ++ ++ LL + R+ L P+
Sbjct: 294 QDYIDGIATFSKYADYMVINISSPNTPGLRSLQRRESIERLLMSAKRERDALPQNHQSPL 353
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+VKI+PDL+ +E KDIADVV+
Sbjct: 354 VVKISPDLNAEELKDIADVVM 374
>gi|402814804|ref|ZP_10864397.1| dihydroorotate dehydrogenase (quinone) [Paenibacillus alvei DSM 29]
gi|402507175|gb|EJW17697.1| dihydroorotate dehydrogenase (quinone) [Paenibacillus alvei DSM 29]
Length = 364
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 150/236 (63%), Gaps = 10/236 (4%)
Query: 95 ALKPLP-PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRK 153
A+K P P+ V I + + K D + K I DVA FVVN+SSPNT NLR
Sbjct: 136 AIKERPIPVWVNIGKNKATPNDKAYEDYL----KCIQTMYDVADLFVVNISSPNTPNLRN 191
Query: 154 LQAKDQLKHLLKTVVE--TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDG 211
LQ D+L+ LL VV+ R A ILVKIAPD+S E + + + ++ S V G
Sbjct: 192 LQHGDELRALLNLVVDEMNRQNAAHGQNKSILVKIAPDVSDSELESMTETIVQSG--VSG 249
Query: 212 LIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
+I +NTT+ R ++ E GGLSG+PL +STE++S++Y++TKG +PI+G GG+F+
Sbjct: 250 IIATNTTLSRMGATHV-HRLENGGLSGKPLTERSTEVVSQVYRMTKGAIPIVGSGGIFTA 308
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+DA++KI+AGASLV+IYT +Y GP + + S L+ L++++G+ +S+A+GA H+
Sbjct: 309 EDAYQKIRAGASLVEIYTGLIYKGPGINRELASGLKRLMKQDGFKHISEAIGADHR 364
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE--TRNQLALKPLPPI 102
+L I DVA FVVN+SSPNT NLR LQ D+L+ LL VV+ R A I
Sbjct: 163 YLKCIQTMYDVADLFVVNISSPNTPNLRNLQHGDELRALLNLVVDEMNRQNAAHGQNKSI 222
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
LVKIAPD+S E + + + ++ S V GI+
Sbjct: 223 LVKIAPDVSDSELESMTETIVQSGVSGII 251
>gi|430002042|emb|CCF17822.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis) [Rhizobium
sp.]
Length = 363
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V GI +F VA YF VN+SSPNT LR LQA+D LK LL+ V+
Sbjct: 139 VNIGANKDSADRVADYVAGIRRFYPVASYFTVNISSPNTPGLRDLQARDSLKALLEAVLA 198
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + A + P+ +KIAPDL+ + D+A L +DGLI+SNTT+ R + D
Sbjct: 199 ARAEEASRIGRSLPVFLKIAPDLTEEGLDDVAAEAL--AHDLDGLIISNTTLSRDDLTDR 256
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R+ E+GGLSG PL ST ++++M + LP++GVGGV S +DA EKI+AGA LVQ+
Sbjct: 257 RHAAESGGLSGAPLFRLSTAVLAKMRQRVGAALPLVGVGGVGSAEDAMEKIRAGADLVQL 316
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ +Y GP L RI L +LL ++G S+
Sbjct: 317 YSCMIYEGPALPARILRGLSDLLDRDGAGSI 347
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI +F VA YF VN+SSPNT LR LQA+D LK LL+ V+ R + A + P+
Sbjct: 154 YVAGIRRFYPVASYFTVNISSPNTPGLRDLQARDSLKALLEAVLAARAEEASRIGRSLPV 213
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + D+A
Sbjct: 214 FLKIAPDLTEEGLDDVA 230
>gi|402819827|ref|ZP_10869394.1| dihydroorotate oxidase [alpha proteobacterium IMCC14465]
gi|402510570|gb|EJW20832.1| dihydroorotate oxidase [alpha proteobacterium IMCC14465]
Length = 481
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 143/227 (62%), Gaps = 10/227 (4%)
Query: 97 KPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQA 156
KPL P + +++ KD AD + D G F ++A Y +NVSSPNT LR LQ
Sbjct: 134 KPLLPKGFSVG--VNIGANKDSADRIDDYRLGAEAFAELADYLTINVSSPNTPGLRDLQT 191
Query: 157 KDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
+ L ++ V + + P+++K+APDL+ D+ +IA V L K K LIVSN
Sbjct: 192 SEALTQIITQVKKAAGDV------PVVLKVAPDLTEDDIAEIAKVAL--KVKPAALIVSN 243
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT++R + YK E GGLSG+PL KST+++ + Y+ T+GKL +IGVGGV DA
Sbjct: 244 TTIERDGLKSSPYKWEEGGLSGKPLMEKSTDVLQQFYRHTQGKLTLIGVGGVSDAADALA 303
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
KIK+GASL+Q+YT+ VY GP L++ +K EL +LL++EG+NS+ A+G
Sbjct: 304 KIKSGASLIQLYTALVYQGPGLISTLKRELADLLREEGFNSLEDAIG 350
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ LG F ++A Y +NVSSPNT LR LQ + L ++ V + + P+++
Sbjct: 160 YRLGAEAFAELADYLTINVSSPNTPGLRDLQTSEALTQIITQVKKAAGDV------PVVL 213
Query: 105 KIAPDLSLDEKKDIADVVL 123
K+APDL+ D+ +IA V L
Sbjct: 214 KVAPDLTEDDIAEIAKVAL 232
>gi|149201241|ref|ZP_01878216.1| dihydroorotate dehydrogenase [Roseovarius sp. TM1035]
gi|149145574|gb|EDM33600.1| dihydroorotate dehydrogenase [Roseovarius sp. TM1035]
Length = 352
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 140/218 (64%), Gaps = 7/218 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D + + G + VNVSSPNT LR+LQ + L LLK V+E
Sbjct: 137 LNLGANKDSADRADDFARVLAHCGAHLDFATVNVSSPNTEKLRELQGAEALMGLLKGVME 196
Query: 170 TRNQLAVKPLP-PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R+ L P P PI +KIAPDLS E +IADV S ++G+I +NTT+ R E L +
Sbjct: 197 ARDWL---PQPIPIFLKIAPDLSDAELSEIADVARASG--LNGIIATNTTLGR-EGLMSA 250
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
K E GGLSG+PL KST +++ + +LT G++P+IGVGG+ S + A+ KI+AGAS VQ+Y
Sbjct: 251 AKGEAGGLSGQPLFEKSTRVLARLSQLTGGEMPLIGVGGIASAEQAYAKIRAGASAVQLY 310
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
++ VY G LV I LE LLQ++G+ SV++AVGA
Sbjct: 311 SALVYQGMSLVAEIARGLERLLQRDGFGSVAEAVGAGR 348
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
+ VNVSSPNT LR+LQ + L LLK V+E R+ L P P PI +KIAPDLS E
Sbjct: 165 FATVNVSSPNTEKLRELQGAEALMGLLKGVMEARDWL---PQPIPIFLKIAPDLSDAELS 221
Query: 117 DIADVVLDS-VKGIL 130
+IADV S + GI+
Sbjct: 222 EIADVARASGLNGII 236
>gi|16449|emb|CAA44695.1| dihydroorotate dehydrogenase [Arabidopsis thaliana]
Length = 434
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 5/190 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + K D D V+G+ A Y V+NVSSPNTA LR LQ + QLK L+K V
Sbjct: 242 VNLGKNKTSEDAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQA 301
Query: 170 TRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-D 226
R+ Q + PP+LVKIAPDLS E +DIA V L +DGLI+SNTTV R + + +
Sbjct: 302 ARDEMQWGDEGPPPLLVKIAPDLSRGELEDIAAVAL--ALHLDGLIISNTTVSRPDAVSN 359
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL ST ++ +MY LT+GK+P+IG GGV SG+DA++KI+AGA+LVQ
Sbjct: 360 NPVATETGGLSGKPLFALSTNMLRDMYTLTRGKIPLIGCGGVSSGEDAYKKIRAGATLVQ 419
Query: 287 IYTSFVYHGP 296
+YT F Y GP
Sbjct: 420 LYTGFAYGGP 429
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPI 102
++ G+ A Y V+NVSSPNTA LR LQ + QLK L+K V R+++ + PP+
Sbjct: 257 YVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQAARDEMQWGDEGPPPL 316
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
LVKIAPDLS E +DIA V L
Sbjct: 317 LVKIAPDLSRGELEDIAAVAL 337
>gi|304403866|ref|ZP_07385528.1| dihydroorotate dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304346844|gb|EFM12676.1| dihydroorotate dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 365
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK---PLPPILVKIAPDL 190
D +FVVN+SSPNT +LR LQ D+L+ LL TV E A K + P LVKIAPD+
Sbjct: 172 DHGDFFVVNISSPNTPDLRALQHGDELRLLLATVTEEMAAQAAKRGQQVKPALVKIAPDM 231
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELIS 250
+ ++ D + S + G+I +NTT+ R E L E GG+SG+PLR++STE+IS
Sbjct: 232 TDEQLAYTVDTIASSG--IAGIIATNTTLSR-EGLTHANAREMGGMSGKPLRDRSTEVIS 288
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
+Y+ T GKLPIIG GG+F+ DA++KI+AGASLV+IYT+ +Y GP + + L+E L
Sbjct: 289 AIYRQTGGKLPIIGSGGIFTADDAYDKIRAGASLVEIYTALIYKGPEVFRELTDGLKERL 348
Query: 311 QKEGYNSVSQAVGAAH 326
+++GY SV +AVG++H
Sbjct: 349 RRDGYRSVKEAVGSSH 364
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK---PLPPILVKIAPDL 110
D +FVVN+SSPNT +LR LQ D+L+ LL TV E A K + P LVKIAPD+
Sbjct: 172 DHGDFFVVNISSPNTPDLRALQHGDELRLLLATVTEEMAAQAAKRGQQVKPALVKIAPDM 231
Query: 111 SLDEKKDIADVVLDS-VKGIL 130
+ ++ D + S + GI+
Sbjct: 232 TDEQLAYTVDTIASSGIAGII 252
>gi|398814073|ref|ZP_10572757.1| dihydroorotate dehydrogenase, subfamily 2 [Brevibacillus sp. BC25]
gi|398037227|gb|EJL30425.1| dihydroorotate dehydrogenase, subfamily 2 [Brevibacillus sp. BC25]
Length = 363
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 133/206 (64%), Gaps = 4/206 (1%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ +D +K + HYFV+N+SSPNT NLR LQ + L+HL++ V E ++ + +
Sbjct: 155 EAAIDYIKCMDMLYAYGHYFVINISSPNTPNLRDLQETESLRHLVRAVREKATEMEARAI 214
Query: 180 P--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLS 237
PIL+K+APD+S + +D+ ++ + G+I +NTT+ R R+ EE GGLS
Sbjct: 215 KKKPILLKVAPDMSDEHMRDVVHAAVEEG--ISGIIATNTTLSREAVSGHRFAEEAGGLS 272
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PL +S + E+Y+ K+PIIGVGG+++G+DA+ KI+AGASLVQ+YT +Y GP
Sbjct: 273 GRPLTERSAAWVKEIYQEVGDKVPIIGVGGIYNGEDAYAKIRAGASLVQVYTGMIYQGPG 332
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVG 323
+ +I +L +L+Q++G+ +S+ +G
Sbjct: 333 IAKQINKKLLKLMQRDGFKHISEVIG 358
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDLSLD 113
HYFV+N+SSPNT NLR LQ + L+HL++ V E ++ + + PIL+K+APD+S +
Sbjct: 171 GHYFVINISSPNTPNLRDLQETESLRHLVRAVREKATEMEARAIKKKPILLKVAPDMSDE 230
Query: 114 EKKDIAD-VVLDSVKGIL 130
+D+ V + + GI+
Sbjct: 231 HMRDVVHAAVEEGISGII 248
>gi|358341537|dbj|GAA49187.1| dihydroorotate dehydrogenase [Clonorchis sinensis]
Length = 390
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 137/214 (64%), Gaps = 15/214 (7%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K D V D V G+ KFG+VA Y V+N+SSPNT LR +Q K +LK LL V+
Sbjct: 169 VNLGCNKQSPDPVADFVAGVKKFGEVADYLVINLSSPNTPGLRSMQNKQKLKELLGQVLS 228
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++L + P+L+KI+PD S + KDI + ++ KVDGLIVSNT++ Y+ A +
Sbjct: 229 ARSKLTKRT--PVLLKISPDESDESLKDIVETAMNPTTKVDGLIVSNTSLASYDEALACH 286
Query: 230 KEET-------------GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
GGLSG PL ++ST ++++ LTKG+LP++GVGGV G+DA +
Sbjct: 287 AAPPPDELNTPSDGIVWGGLSGRPLFDRSTVCLTKVAALTKGQLPLVGVGGVSDGEDAAK 346
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
K+ AGASLVQ+YT +Y GPP+V R+ ELEEL+
Sbjct: 347 KLSAGASLVQLYTGLIYQGPPVVRRVTRELEELV 380
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KFG+VA Y V+N+SSPNT LR +Q K +LK LL V+ R++L + P+L+
Sbjct: 184 FVAGVKKFGEVADYLVINLSSPNTPGLRSMQNKQKLKELLGQVLSARSKLTKR--TPVLL 241
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KI+PD S + KDI + ++
Sbjct: 242 KISPDESDESLKDIVETAMN 261
>gi|226314520|ref|YP_002774416.1| dihydroorotate dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|226097470|dbj|BAH45912.1| dihydroorotate dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 363
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--PILVKIAPDLSLD 193
HYFV+N+SSPNT NLR LQ + L+HL++ V E ++ + + PIL+K+APD+S +
Sbjct: 171 GHYFVINISSPNTPNLRDLQETESLRHLVRAVKEKATEMEGRSIKKKPILLKVAPDMSDE 230
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+D+ ++ + G+I +NTT+ R R+ EE GGLSG PL +ST + E+Y
Sbjct: 231 HMRDVVHAAVEEG--ISGIIATNTTLSREAVSGHRFAEEAGGLSGRPLTERSTAWVKEIY 288
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
+ K+PIIGVGG+++G+DA+ KI+AGASLVQ+YT +Y GP + +I +L +L+Q++
Sbjct: 289 QEVGDKVPIIGVGGIYNGEDAYAKIRAGASLVQVYTGMIYQGPGIAKQINKKLLKLMQRD 348
Query: 314 GYNSVSQAVG 323
G+ +S+ +G
Sbjct: 349 GFKHISEVIG 358
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDLSLD 113
HYFV+N+SSPNT NLR LQ + L+HL++ V E ++ + + PIL+K+APD+S +
Sbjct: 171 GHYFVINISSPNTPNLRDLQETESLRHLVRAVKEKATEMEGRSIKKKPILLKVAPDMSDE 230
Query: 114 EKKDIAD-VVLDSVKGIL 130
+D+ V + + GI+
Sbjct: 231 HMRDVVHAAVEEGISGII 248
>gi|354580536|ref|ZP_08999441.1| dihydroorotate dehydrogenase [Paenibacillus lactis 154]
gi|353202967|gb|EHB68416.1| dihydroorotate dehydrogenase [Paenibacillus lactis 154]
Length = 364
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V I + +K D ++ + +GD +FVVN+SSPNT +LR LQ +L
Sbjct: 143 PVAVNIGKNKVTPNEKANGDYEA-CIQALFPYGD---FFVVNISSPNTPDLRSLQHGSEL 198
Query: 161 KHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
LL+ V+ N+ A +LVKIAPD+S E + + + + S V G+I +NTT
Sbjct: 199 SSLLEAVMNEMNRQAEIHGSRKAVLVKIAPDVSDAELEYMVETIRASG--VSGIIATNTT 256
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ R E L +ETGGLSG+PLR +STE+IS +YK T G LPIIG GG+F+ DA+EKI
Sbjct: 257 LSR-EGLTHTNAKETGGLSGKPLRERSTEIISRIYKQTGGALPIIGSGGIFTAADAYEKI 315
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+AGASLV+IYT+ +Y GP + ++ + L +LL K+G++ +S+AVGA H+
Sbjct: 316 RAGASLVEIYTALIYEGPEVNRKLHAGLRQLLAKDGFSHISEAVGANHR 364
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKI 106
+ +GD +FVVN+SSPNT +LR LQ +L LL+ V+ N+ A +LVKI
Sbjct: 170 LFPYGD---FFVVNISSPNTPDLRSLQHGSELSSLLEAVMNEMNRQAEIHGSRKAVLVKI 226
Query: 107 APDLSLDEKKDIADVVLDS-VKGIL 130
APD+S E + + + + S V GI+
Sbjct: 227 APDVSDAELEYMVETIRASGVSGII 251
>gi|421872556|ref|ZP_16304174.1| dihydroorotate oxidase [Brevibacillus laterosporus GI-9]
gi|372458529|emb|CCF13723.1| dihydroorotate oxidase [Brevibacillus laterosporus GI-9]
Length = 351
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLD 193
HYF +NVSSPNT NLR LQ D L+HLL+T+ + +QL PIL+K+APD+S +
Sbjct: 160 GHYFAINVSSPNTPNLRDLQEVDSLRHLLRTIRKKADQLEKYGAKRKPILLKVAPDMSDE 219
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
D+ V L+ +DGLI +NTT+ R D R +E GGLSG L ++TE + ++Y
Sbjct: 220 HMSDVVYVALEEG--MDGLIATNTTLSRESVSDRRLAKEAGGLSGPMLLPRATECVRDIY 277
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
K K+PIIGVGG+F+G DA+ ++AGAS+ QIYTS +Y GP T I L +L++++
Sbjct: 278 KAVGDKMPIIGVGGIFTGDDAYRMMRAGASMTQIYTSMIYVGPGAATEINKRLVQLMKRD 337
Query: 314 GYNSVSQAVGAAHK 327
G+ +S+ +G HK
Sbjct: 338 GFTHISEIIGIDHK 351
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPILVKIAPDLSLD 113
HYF +NVSSPNT NLR LQ D L+HLL+T+ + +QL PIL+K+APD+S +
Sbjct: 160 GHYFAINVSSPNTPNLRDLQEVDSLRHLLRTIRKKADQLEKYGAKRKPILLKVAPDMSDE 219
Query: 114 EKKDIADVVLD 124
D+ V L+
Sbjct: 220 HMSDVVYVALE 230
>gi|339007177|ref|ZP_08639752.1| dihydroorotate dehydrogenase [Brevibacillus laterosporus LMG 15441]
gi|338776386|gb|EGP35914.1| dihydroorotate dehydrogenase [Brevibacillus laterosporus LMG 15441]
Length = 365
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLD 193
HYF +NVSSPNT NLR LQ D L+HLL+T+ + +QL PIL+K+APD+S +
Sbjct: 174 GHYFAINVSSPNTPNLRDLQEVDSLRHLLRTIRKKADQLEKYGAKRKPILLKVAPDMSDE 233
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
D+ V L+ +DGLI +NTT+ R D R +E GGLSG L ++TE + ++Y
Sbjct: 234 HMSDVVYVALEEG--MDGLIATNTTLSRESVSDRRLAKEAGGLSGPMLLPRATECVRDIY 291
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
K K+PIIGVGG+F+G DA+ ++AGAS+ QIYTS +Y GP T I L +L++++
Sbjct: 292 KAVGDKMPIIGVGGIFTGDDAYRMMRAGASMTQIYTSMIYVGPGAATEINKRLVQLMKRD 351
Query: 314 GYNSVSQAVGAAHK 327
G+ +S+ +G HK
Sbjct: 352 GFTHISEIIGIDHK 365
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPILVKIAPDLSLD 113
HYF +NVSSPNT NLR LQ D L+HLL+T+ + +QL PIL+K+APD+S +
Sbjct: 174 GHYFAINVSSPNTPNLRDLQEVDSLRHLLRTIRKKADQLEKYGAKRKPILLKVAPDMSDE 233
Query: 114 EKKDIADVVLD 124
D+ V L+
Sbjct: 234 HMSDVVYVALE 244
>gi|399054001|ref|ZP_10742702.1| dihydroorotate dehydrogenase, subfamily 2 [Brevibacillus sp. CF112]
gi|398048171|gb|EJL40657.1| dihydroorotate dehydrogenase, subfamily 2 [Brevibacillus sp. CF112]
Length = 363
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 136/207 (65%), Gaps = 4/207 (1%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D +K + HYFV+N+SSPNT NLR LQ + ++ L++ V E ++ V+ + P
Sbjct: 159 DYIKCLDMLYSYGHYFVINISSPNTPNLRDLQETESMRLLVRAVREKAAEMEVRGIQKKP 218
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
IL+K+APD+S + +D+ ++ + G+I +NTT+ R Y EE GGLSG+PL
Sbjct: 219 ILLKVAPDMSDEHMRDVVQGAVEEG--ISGIIATNTTLSREAVQGHHYAEEAGGLSGKPL 276
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ST + E+Y+ K+PIIGVGG+F+G+DA+ KI+AGASLVQ+YT +Y GP + +
Sbjct: 277 TERSTAWVKEIYQEVGDKVPIIGVGGIFTGEDAYAKIRAGASLVQVYTGMIYQGPGISKQ 336
Query: 302 IKSELEELLQKEGYNSVSQAVGAAHKS 328
I +L +LL+++G++ +S+AVG +S
Sbjct: 337 INKKLLQLLKRDGFSHISEAVGVDARS 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
HYFV+N+SSPNT NLR LQ + ++ L++ V E ++ ++ + PIL+K+APD+S +
Sbjct: 171 GHYFVINISSPNTPNLRDLQETESMRLLVRAVREKAAEMEVRGIQKKPILLKVAPDMSDE 230
Query: 114 EKKDIAD-VVLDSVKGIL 130
+D+ V + + GI+
Sbjct: 231 HMRDVVQGAVEEGISGII 248
>gi|334136959|ref|ZP_08510409.1| dihydroorotate oxidase [Paenibacillus sp. HGF7]
gi|333605431|gb|EGL16795.1| dihydroorotate oxidase [Paenibacillus sp. HGF7]
Length = 367
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 159/246 (64%), Gaps = 11/246 (4%)
Query: 85 KTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVS 144
+ + + ++L +P+P + V I + + ++ D ++ + GD +FVVN+S
Sbjct: 128 EAMAQNLSRLGSRPIP-VAVNIGKNKTTPNEQAEEDY-RSCIRTLYGHGD---FFVVNIS 182
Query: 145 SPNTANLRKLQAKDQLKHLLKTVV-ETRNQ--LAVKPLPPILVKIAPDLSLDEKKDIADV 201
SPNT +LR LQ + L+ LL VV E +NQ P+LVKIAPDL+ E ++ V
Sbjct: 183 SPNTPDLRNLQHGNDLQRLLHAVVGEMKNQHERTGGAAKPVLVKIAPDLTDTELENTIAV 242
Query: 202 VLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLP 261
+ S V G+IVSNTT+ R + L +++ GGLSG PL ++STELIS +Y++T+G++P
Sbjct: 243 IGGSG--VSGIIVSNTTLGR-DGLSHPNRDQAGGLSGRPLTSRSTELISRVYRMTEGRIP 299
Query: 262 IIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQA 321
IIG GG+F+ +DA++KI+AGASLV++YT+ +Y GP L+ ++ L LL+K+G+ +S+A
Sbjct: 300 IIGSGGIFTAQDAYDKIRAGASLVEVYTALIYEGPGLLKKLNEGLSTLLKKDGFTHISEA 359
Query: 322 VGAAHK 327
+GA +
Sbjct: 360 IGADQR 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVV-ETRNQ--LALKPLPPILVKIAPDLSLDE 114
+FVVN+SSPNT +LR LQ + L+ LL VV E +NQ P+LVKIAPDL+ E
Sbjct: 176 FFVVNISSPNTPDLRNLQHGNDLQRLLHAVVGEMKNQHERTGGAAKPVLVKIAPDLTDTE 235
Query: 115 KKDIADVVLDS-VKGIL 130
++ V+ S V GI+
Sbjct: 236 LENTIAVIGGSGVSGII 252
>gi|340781430|ref|YP_004748037.1| dihydroorotate dehydrogenase [Acidithiobacillus caldus SM-1]
gi|340555583|gb|AEK57337.1| Dihydroorotate dehydrogenase [Acidithiobacillus caldus SM-1]
Length = 367
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V + ++ + + + V D I + G A YF +NVSSPNT +LR+LQ L
Sbjct: 138 PLAVPLGINIGKNRETPLTAAVGDYRALIQQLGPFADYFSINVSSPNTPDLRRLQDPQSL 197
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
+ LL+ + E R +L +P P+L+KIAPDL+ DE +A + + + +DG I +NTT+
Sbjct: 198 RPLLQELREARQKLQRQP--PLLLKIAPDLASDEVTALAALAQEPEPLLDGFIATNTTLG 255
Query: 221 RYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKA 280
R D + +E GGLSG PL+ ++ +I+++Y+ + G+LPIIGVGGV + +D +KI+A
Sbjct: 256 RPS--DWPHPDEAGGLSGAPLKRRANGIIAQLYRASSGRLPIIGVGGVATAQDVLDKIEA 313
Query: 281 GASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GASLVQ+YT+ +Y GP LV RI L ELL G + + VG
Sbjct: 314 GASLVQLYTALIYEGPDLVRRITDALPELLTDRGVDHLGALVG 356
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
I + G A YF +NVSSPNT +LR+LQ L+ LL+ + E R +L + PP+L+KIAP
Sbjct: 166 IQQLGPFADYFSINVSSPNTPDLRRLQDPQSLRPLLQELREARQKLQRQ--PPLLLKIAP 223
Query: 109 DLSLDEKKDIA 119
DL+ DE +A
Sbjct: 224 DLASDEVTALA 234
>gi|429221020|ref|YP_007182664.1| dihydroorotate dehydrogenase, subfamily 2 [Deinococcus
peraridilitoris DSM 19664]
gi|429131883|gb|AFZ68898.1| dihydroorotate dehydrogenase, subfamily 2 [Deinococcus
peraridilitoris DSM 19664]
Length = 364
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 140/206 (67%), Gaps = 8/206 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
+ ++ + +GD +FVVNVSSPNT LR LQ +L LL+ V++ + V+ L P
Sbjct: 165 ECLRELYAYGD---FFVVNVSSPNTPGLRSLQGGGELLGLLRAVLQEADVQRVRQLQHKP 221
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL D + + V V G+IVSNTT+ R E L + ++++ GGLSG+PL
Sbjct: 222 VLVKIAPDLDDDALQTTVNAV--RAAGVQGIIVSNTTLSR-EGLSSPHRQQAGGLSGQPL 278
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +ST L+ +Y LT+G LPI+ GGVFS +DA+EKI+AGASLV+IYT+ +Y GP ++
Sbjct: 279 RERSTALVRRVYALTQGALPIVASGGVFSAQDAYEKIRAGASLVEIYTALIYEGPEVLRS 338
Query: 302 IKSELEELLQKEGYNSVSQAVGAAHK 327
I LE LLQ+ G+++V+QAVGA H+
Sbjct: 339 INEGLEALLQRNGFDNVAQAVGADHR 364
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKI 106
+ +GD +FVVNVSSPNT LR LQ +L LL+ V++ + ++ L P+LVKI
Sbjct: 170 LYAYGD---FFVVNVSSPNTPGLRSLQGGGELLGLLRAVLQEADVQRVRQLQHKPVLVKI 226
Query: 107 APDLSLDEKKDIADVVLDS-VKGIL 130
APDL D + + V + V+GI+
Sbjct: 227 APDLDDDALQTTVNAVRAAGVQGII 251
>gi|114766285|ref|ZP_01445272.1| dihydroorotate dehydrogenase [Pelagibaca bermudensis HTCC2601]
gi|114541486|gb|EAU44531.1| dihydroorotate dehydrogenase [Pelagibaca bermudensis HTCC2601]
Length = 352
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + + G + VNVSSPNT LR LQ KD L LL V+
Sbjct: 137 LNLGANKDSDDRAADFAQVLARCGGDLDFATVNVSSPNTEKLRDLQGKDALSALLAGVLA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ LA KP+P + +KIAPDL D+A+V L S +DG+I +NTT+ R E L + +
Sbjct: 197 ARDGLA-KPIP-VFLKIAPDLDEAGLTDVAEVALASG--IDGIIATNTTLSR-EGLSSPF 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ GGLSG+PL KST +++ + +LT+G+LP+IGVGGV S + A+ KI+AGAS VQ+YT
Sbjct: 252 AAQAGGLSGQPLFEKSTRVLARLSQLTEGRLPLIGVGGVGSAEQAYAKIRAGASAVQVYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ V+ G LV I L+ LLQ++G+ SV++AVG +
Sbjct: 312 ALVFGGMSLVPEIVRGLDALLQRDGFASVAEAVGTGRE 349
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
GD+ + VNVSSPNT LR LQ KD L LL V+ R+ LA KP+ P+ +KIAPDL
Sbjct: 161 GDL-DFATVNVSSPNTEKLRDLQGKDALSALLAGVLAARDGLA-KPI-PVFLKIAPDLDE 217
Query: 113 DEKKDIADVVLDS-VKGIL 130
D+A+V L S + GI+
Sbjct: 218 AGLTDVAEVALASGIDGII 236
>gi|449687471|ref|XP_002153980.2| PREDICTED: dihydroorotate dehydrogenase (quinone),
mitochondrial-like, partial [Hydra magnipapillata]
Length = 167
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 120/158 (75%), Gaps = 2/158 (1%)
Query: 167 VVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
V++ R +L KP P+LVKI+PDLS +K+DI+ VV SK KVDGLI+SNTT+ R + L
Sbjct: 1 VLKAREKLQNKP--PLLVKISPDLSSFDKEDISAVVTSSKTKVDGLIISNTTISRPQSLI 58
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ K+E GGLSG+PL++ +T+ I +MY LT G +PIIGVGG+ +G DAF+KI GASLVQ
Sbjct: 59 SANKDEVGGLSGKPLKDLATQCIKDMYILTGGSIPIIGVGGISNGADAFDKICNGASLVQ 118
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+YTS HGPP+V ++K EL E+L++ G++SV QAVG
Sbjct: 119 LYTSLTIHGPPVVGKVKMELAEILRQNGFSSVKQAVGC 156
>gi|114769532|ref|ZP_01447158.1| dihydroorotate dehydrogenase [Rhodobacterales bacterium HTCC2255]
gi|114550449|gb|EAU53330.1| dihydroorotate dehydrogenase [Rhodobacterales bacterium HTCC2255]
Length = 352
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L K+ + +D VK + G+ + VNVSSPNT LR LQ + L LL V+E
Sbjct: 137 LNLGANKNSSHRAIDFVKVLETCGNFIDFATVNVSSPNTEKLRDLQGEKALTALLTGVIE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TRNQL + PI +KIAPDL+ +E IA V ++D +I +NTT+DR + +++
Sbjct: 197 TRNQLGRQI--PIFLKIAPDLTSEEISQIAQVA--RHTRIDAIIATNTTLDRTNLM-SKH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ +TGGLSG+PL KST +++++ +G +PIIGVGG+ S + AFEKI+AGASLVQ+YT
Sbjct: 252 QIQTGGLSGKPLFEKSTRVLAKLAYELEGNIPIIGVGGIDSAEAAFEKIRAGASLVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+ V+HG L I L+ LL+K GY+ +SQAVG+
Sbjct: 312 ALVFHGLSLGRDIAKGLDSLLEKNGYDHISQAVGSG 347
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G+ + VNVSSPNT LR LQ + L LL V+ETRNQL + PI +KIAPDL+
Sbjct: 160 GNFIDFATVNVSSPNTEKLRDLQGEKALTALLTGVIETRNQLGRQ--IPIFLKIAPDLTS 217
Query: 113 DEKKDIADVV 122
+E IA V
Sbjct: 218 EEISQIAQVA 227
>gi|221058280|ref|XP_002261648.1| Dihydroorotate dehydrogenase [Plasmodium knowlesi strain H]
gi|194247653|emb|CAQ41053.1| Dihydroorotate dehydrogenase, putative [Plasmodium knowlesi strain
H]
Length = 556
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 143/236 (60%), Gaps = 22/236 (9%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+SL + KD AD++ D I + G A Y +NVSSPNT LR Q ++L+ ++ V E
Sbjct: 322 VSLGKNKDSADILEDLSYCISRIGKYADYIAINVSSPNTPGLRDNQQSERLQRIILRVKE 381
Query: 170 TRNQL------------------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDG 211
++L K P + VK+APDL EKK IADV+L K KVDG
Sbjct: 382 EVDKLEESNVVGDDVVRGDTWVNTSKRKPLVFVKLAPDLEEGEKKKIADVLL--KTKVDG 439
Query: 212 LIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
+I+ NTT +++ + ++++ GG+SGE L++ ST+ IS+MY T K+PII GG+F+G
Sbjct: 440 MIICNTTTEKFNIKN--FQDKKGGVSGEKLKDVSTKFISQMYNYTNKKIPIIASGGIFTG 497
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
KDA EKI+AGAS+ Q+Y+ V++G RIK EL+ LL + GY + A+G AH+
Sbjct: 498 KDALEKIEAGASVCQLYSCLVFNGMKAAVRIKRELDHLLYQRGYYKLEDAIGKAHR 553
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------- 94
I + G A Y +NVSSPNT LR Q ++L+ ++ V E ++L
Sbjct: 341 ISRIGKYADYIAINVSSPNTPGLRDNQQSERLQRIILRVKEEVDKLEESNVVGDDVVRGD 400
Query: 95 ----ALKPLPPILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
K P + VK+APDL EKK IADV+L + V G++
Sbjct: 401 TWVNTSKRKPLVFVKLAPDLEEGEKKKIADVLLKTKVDGMI 441
>gi|407973114|ref|ZP_11154027.1| dihydroorotate dehydrogenase 2 [Nitratireductor indicus C115]
gi|407431885|gb|EKF44556.1| dihydroorotate dehydrogenase 2 [Nitratireductor indicus C115]
Length = 363
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ FGD+A Y VN+SSPNT LR LQ ++ L LLK V+
Sbjct: 139 VNIGANKDSADRIADYETGVRAFGDIASYLAVNISSPNTVGLRALQDRENLSELLKRVLA 198
Query: 170 TRNQLAVKPLPPI--LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A + PI +KIAPDL+ D DIA VLD + +DGLI+SNTT+ R +
Sbjct: 199 ARDEVAKQRRAPIPLFLKIAPDLTEDAMADIAVEVLDKR--IDGLIISNTTLSR-RGATS 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R ETGGLSG+PL +ST +++ M +L +P+IGVGGV S + A EKI+AGA LVQI
Sbjct: 256 RKAHETGGLSGQPLFERSTMVLARMRRLVGPAMPLIGVGGVHSTETALEKIRAGADLVQI 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YTS ++ G L +I + + Q+E S+ Q
Sbjct: 316 YTSMIFGGASLPGQIVAGMSAYAQRENLTSLRQ 348
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPI--LVK 105
G+ FGD+A Y VN+SSPNT LR LQ ++ L LLK V+ R+++A + PI +K
Sbjct: 157 GVRAFGDIASYLAVNISSPNTVGLRALQDRENLSELLKRVLAARDEVAKQRRAPIPLFLK 216
Query: 106 IAPDLSLDEKKDIADVVLD 124
IAPDL+ D DIA VLD
Sbjct: 217 IAPDLTEDAMADIAVEVLD 235
>gi|433546877|ref|ZP_20503175.1| dihydroorotate dehydrogenase [Brevibacillus agri BAB-2500]
gi|432181843|gb|ELK39446.1| dihydroorotate dehydrogenase [Brevibacillus agri BAB-2500]
Length = 363
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D +K + HYFV+N+SSPNT NLR LQ + ++ L++ V E ++ + + P
Sbjct: 159 DYIKCLDMLYSYGHYFVINISSPNTPNLRDLQETESMRLLVRAVREKAAEMEARGIQKKP 218
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
IL+K+APD+S + +D+ ++ + G+I +NTT+ R Y EE GGLSG+PL
Sbjct: 219 ILLKVAPDMSDEHMRDVVQGAVEEG--ISGIIATNTTLSREAVQGHHYAEEAGGLSGKPL 276
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ST + E+Y+ K+PIIGVGG+F+G+DA+ KI+AGASLVQ+YT +Y GP + +
Sbjct: 277 TERSTAWVKEIYQEVGDKVPIIGVGGIFTGEDAYAKIRAGASLVQVYTGMIYQGPGISKQ 336
Query: 302 IKSELEELLQKEGYNSVSQAVGAAHKS 328
I +L +LL+++G++ +S+AVG +S
Sbjct: 337 INKKLLQLLKRDGFSHISEAVGVDARS 363
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
HYFV+N+SSPNT NLR LQ + ++ L++ V E ++ + + PIL+K+APD+S +
Sbjct: 171 GHYFVINISSPNTPNLRDLQETESMRLLVRAVREKAAEMEARGIQKKPILLKVAPDMSDE 230
Query: 114 EKKDIAD-VVLDSVKGIL 130
+D+ V + + GI+
Sbjct: 231 HMRDVVQGAVEEGISGII 248
>gi|324506894|gb|ADY42931.1| Dihydroorotate dehydrogenase [Ascaris suum]
Length = 432
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 123/167 (73%)
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
K+ L TVV+ P +L+KI+PDL EKK+IA VV+D + +DG+IVSNTT+
Sbjct: 265 KNKLLTVVKAAADRISGKKPVVLLKISPDLIESEKKEIAKVVMDKRYGIDGMIVSNTTIS 324
Query: 221 RYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKA 280
R L +++ E GGLSG+PL+ ST+ + +MY+LT GK+PIIG GG+ SG DA+ KI+A
Sbjct: 325 RPVDLRSKHSHEDGGLSGKPLKELSTQCVRDMYRLTSGKVPIIGCGGISSGADAYAKIRA 384
Query: 281 GASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
GASLVQ+YT+ VY G P++ ++K EL ELL+++GY++VS+AVGA HK
Sbjct: 385 GASLVQLYTALVYQGFPVIGKVKRELAELLRRDGYSNVSEAVGADHK 431
>gi|37522649|ref|NP_926026.1| dihydroorotate dehydrogenase 2 [Gloeobacter violaceus PCC 7421]
gi|73913679|sp|Q7NC99.1|PYRD_GLOVI RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|35213650|dbj|BAC91021.1| dihydroorotate dehydrogenase [Gloeobacter violaceus PCC 7421]
Length = 353
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 12/207 (5%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
+D L S + + GD YFVVNVSSPNT LR+LQ D+L +L R Q A +
Sbjct: 157 SDDYLYSFERLYHLGD---YFVVNVSSPNTPGLRELQQADRLGEIL-----ARLQCANRE 208
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSG 238
P+LVKIAPDL D + D+ + ++ G+I +NTT+ R +ETGGLSG
Sbjct: 209 SKPLLVKIAPDLGWDAVDAVVDLC--GEHRLAGVIATNTTIARSGLRSD--LQETGGLSG 264
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
PLRN+STE+I ++ T+G+LPI+GVGG+FSG+DA+EKI GASL+Q+YT ++Y GP +
Sbjct: 265 APLRNRSTEVIGHIWGRTRGQLPIVGVGGIFSGEDAWEKIAHGASLLQVYTGWIYEGPWM 324
Query: 299 VTRIKSELEELLQKEGYNSVSQAVGAA 325
V RI + L L++ G+ + QA G A
Sbjct: 325 VRRILASLATRLERSGFEHLQQATGCA 351
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+ YFVVNVSSPNT LR+LQ D+L +L R Q A + P+LVKIAPDL D
Sbjct: 170 LGDYFVVNVSSPNTPGLRELQQADRLGEIL-----ARLQCANRESKPLLVKIAPDLGWDA 224
Query: 115 KKDIADVV 122
+ D+
Sbjct: 225 VDAVVDLC 232
>gi|390450907|ref|ZP_10236492.1| dihydroorotate dehydrogenase 2 [Nitratireductor aquibiodomus RA22]
gi|389661804|gb|EIM73399.1| dihydroorotate dehydrogenase 2 [Nitratireductor aquibiodomus RA22]
Length = 363
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 5/213 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D G+ FGD+A Y +N+SSPNTA LR LQ + L LL V+E
Sbjct: 139 VNIGANKDSTDRIADYEAGVRAFGDIASYLAINISSPNTAGLRSLQDRANLAELLHRVIE 198
Query: 170 TRNQLA-VKPLP-PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
TRN++A ++ P P+ +KIAPDL+ DIAD L + +DGLIVSNTT+ R + +
Sbjct: 199 TRNEVARLRRAPIPLFLKIAPDLTDAALADIADEALGKR--IDGLIVSNTTLSRA-GVTS 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R ETGGLSG+PL +ST ++++M L +PIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RLAHETGGLSGQPLFERSTVILAKMRLLVGPAMPIIGVGGVCSTETALEKIRAGADLVQM 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ ++ G L RI E+ Q+E +S+ Q
Sbjct: 316 YSGLIFGGTCLPGRILEEMSAFAQRENLSSLRQ 348
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 11 RILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTAN 70
RI SR R G G N S+ + + G+ FGD+A Y +N+SSPNTA
Sbjct: 126 RIRSRAGRGGIVGVNIGANKDSTDR------IADYEAGVRAFGDIASYLAINISSPNTAG 179
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLA-LKPLP-PILVKIAPDLSLDEKKDIADVVL 123
LR LQ + L LL V+ETRN++A L+ P P+ +KIAPDL+ DIAD L
Sbjct: 180 LRSLQDRANLAELLHRVIETRNEVARLRRAPIPLFLKIAPDLTDAALADIADEAL 234
>gi|442320464|ref|YP_007360485.1| dihydroorotate dehydrogenase 2 [Myxococcus stipitatus DSM 14675]
gi|441488106|gb|AGC44801.1| dihydroorotate dehydrogenase 2 [Myxococcus stipitatus DSM 14675]
Length = 364
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 10/221 (4%)
Query: 110 LSLDEKKD--IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + V D V + + Y VVN SSPNT LRKLQ +QL LL TV
Sbjct: 144 VNVGKNKDTPLEQAVDDYVACVDALAPLGDYVVVNASSPNTPGLRKLQEPEQLAALLGTV 203
Query: 168 VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYLD 226
E + AV P P+ +KIAPDL+ + ++ DV K+ GLI +NTTV R +E+
Sbjct: 204 QERLS--AVAPGKPLFLKIAPDLTPEAVDEVVDVA--RARKLAGLIATNTTVARPFEHPL 259
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
A+ E GGLSG P+R + +I Y+ + G LPIIGVGGVFS +D +EK++AGAS+VQ
Sbjct: 260 AK---EAGGLSGAPVREPANAVIRRAYQRSGGALPIIGVGGVFSAEDVYEKLRAGASVVQ 316
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT F+Y GP +V RI L LL ++G+ V+QA+GA H+
Sbjct: 317 VYTGFIYEGPGMVRRILPALARLLARDGFTHVTQAIGAEHR 357
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y VVN SSPNT LRKLQ +QL LL TV E + A+ P P+ +KIAPDL+ + +
Sbjct: 174 YVVVNASSPNTPGLRKLQEPEQLAALLGTVQERLS--AVAPGKPLFLKIAPDLTPEAVDE 231
Query: 118 IADVV 122
+ DV
Sbjct: 232 VVDVA 236
>gi|294678141|ref|YP_003578756.1| dihydroorotate oxidase [Rhodobacter capsulatus SB 1003]
gi|294476961|gb|ADE86349.1| dihydroorotate oxidase-2 [Rhodobacter capsulatus SB 1003]
Length = 352
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 138/214 (64%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D + + G + VNVSSPNT LR LQ K+ L LL+ V+
Sbjct: 137 LNLGANKDSADRAADFATVLKRAGAHIDFATVNVSSPNTEKLRDLQGKEALAALLRGVLA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +L +PLP + +KIAPDLS E +D+A+V +DG++ +NTT+ R E L +
Sbjct: 197 ARAELG-RPLP-VFLKIAPDLSPAELEDVAEVA--RAVGIDGIVATNTTLSR-EGLKSAS 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ GGLSG PL KST +++ + KLT+GKLP+IGVGG+ S ++A+EKI+AGAS VQ+Y+
Sbjct: 252 SSQAGGLSGAPLFEKSTRVLAHLSKLTEGKLPLIGVGGISSAEEAYEKIRAGASAVQLYS 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L + L+ LL ++G+ SV++AVG
Sbjct: 312 AMVYKGIGLAAEVARGLDALLARDGFASVAEAVG 345
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K+ L LL+ V+ R +L +PL P+ +KIAPDLS E +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKEALAALLRGVLAARAELG-RPL-PVFLKIAPDLSPAELED 222
Query: 118 IADVV 122
+A+V
Sbjct: 223 VAEVA 227
>gi|110632456|ref|YP_672664.1| dihydroorotate dehydrogenase 2 [Chelativorans sp. BNC1]
gi|123354074|sp|Q11M76.1|PYRD_MESSB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|110283440|gb|ABG61499.1| dihydroorotate oxidase A [Chelativorans sp. BNC1]
Length = 363
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 5/213 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ +D +D + D +G+ F VA Y +N+SSPNT LR LQ ++ L LL+ V+
Sbjct: 139 VNIGANRDSSDRMADYEEGVRTFAAVASYLTINISSPNTTGLRGLQDRENLSELLQRVMR 198
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ A +K P+ +KIAPDLS + DIA VL+ +DGLIVSNTT+ R E + A
Sbjct: 199 VRNEQAALIKRKVPVFLKIAPDLSEEALADIAQEVLEKG--LDGLIVSNTTLSR-EGVSA 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
ETGGLSGEPL +ST ++++M +L LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 PAASETGGLSGEPLFERSTIVLAKMRRLVGPALPIIGVGGVHSAETALEKMRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YT V+ GP L RI S L + G NS+++
Sbjct: 316 YTGMVFAGPGLPARIVSRLAAYAEANGLNSIAE 348
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVK 105
G+ F VA Y +N+SSPNT LR LQ ++ L LL+ V+ RN+ A +K P+ +K
Sbjct: 157 GVRTFAAVASYLTINISSPNTTGLRGLQDRENLSELLQRVMRVRNEQAALIKRKVPVFLK 216
Query: 106 IAPDLSLDEKKDIADVVLD 124
IAPDLS + DIA VL+
Sbjct: 217 IAPDLSEEALADIAQEVLE 235
>gi|452751928|ref|ZP_21951673.1| Dihydroorotate dehydrogenase [alpha proteobacterium JLT2015]
gi|451961147|gb|EMD83558.1| Dihydroorotate dehydrogenase [alpha proteobacterium JLT2015]
Length = 350
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 137/215 (63%), Gaps = 6/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D G+ + +A Y VN+SSPNT LR LQ+KD L LL+ +
Sbjct: 139 INVGANKDSEDRIADYEVGVRRAAPLADYLTVNISSPNTPGLRALQSKDALAELLERSLA 198
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R A+ P+ VK+APDLS + DIA+V L S V GLI SNTT+ R + L +
Sbjct: 199 ARGGRAI----PLFVKVAPDLSDSDVADIAEVALASG--VSGLICSNTTIARPDALRSDR 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PL+ ++ + + + T G+LP+IGVGG+ + +DA+ +I+AGASLVQ+YT
Sbjct: 253 RAEEGGLSGRPLKARALDRLIAFRQATGGRLPLIGVGGIETAEDAYARIRAGASLVQLYT 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP L R+ + L + ++ +G+ SV++AVGA
Sbjct: 313 ALVYEGPRLPRRLAAGLAKHVKADGFASVAEAVGA 347
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ +G+ + +A Y VN+SSPNT LR LQ+KD L LL+ + R A+ P+ V
Sbjct: 154 YEVGVRRAAPLADYLTVNISSPNTPGLRALQSKDALAELLERSLAARGGRAI----PLFV 209
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
K+APDLS + DIA+V L S V G++
Sbjct: 210 KVAPDLSDSDVADIAEVALASGVSGLI 236
>gi|357008073|ref|ZP_09073072.1| dihydroorotate dehydrogenase 2 [Paenibacillus elgii B69]
Length = 364
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 126 VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV---VETRNQLAVKPLPPI 182
++ + +GD +FVVN+SSPNT +LR LQ D L LL V + ++ P+
Sbjct: 167 IQALYGYGD---FFVVNISSPNTPDLRNLQHGDDLSRLLAAVKDEISKQHARFGGREKPV 223
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLR 242
LVKIAPDL+ E + + + ++ + V G+I SNTT+ R + L + ETGGLSG PL
Sbjct: 224 LVKIAPDLTPQEIEYMVETIV--RSHVSGIIASNTTIAR-DGLRHANRGETGGLSGRPLT 280
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+STELI +Y+LT GKLPIIG GG+F+ +DA+ KI+AGASLV++YT +Y GP ++ RI
Sbjct: 281 ERSTELIRTVYRLTDGKLPIIGSGGIFTAEDAYAKIRAGASLVEVYTGLIYEGPDVLRRI 340
Query: 303 KSELEELLQKEGYNSVSQAVGAAH 326
L LL+++G+ +VS+A+G+ H
Sbjct: 341 NRGLRTLLRQDGFTNVSEAIGSGH 364
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV---VETRNQLALKPLPPILVKIAP 108
+GD +FVVN+SSPNT +LR LQ D L LL V + ++ P+LVKIAP
Sbjct: 173 YGD---FFVVNISSPNTPDLRNLQHGDDLSRLLAAVKDEISKQHARFGGREKPVLVKIAP 229
Query: 109 DLSLDEKKDIADVVLDS-VKGIL 130
DL+ E + + + ++ S V GI+
Sbjct: 230 DLTPQEIEYMVETIVRSHVSGII 252
>gi|430749692|ref|YP_007212600.1| dihydroorotate dehydrogenase, subfamily 2 [Thermobacillus composti
KWC4]
gi|430733657|gb|AGA57602.1| dihydroorotate dehydrogenase, subfamily 2 [Thermobacillus composti
KWC4]
Length = 365
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 145/231 (62%), Gaps = 12/231 (5%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
PI V I + + +K D ++ + +GD +FVVN+SSPNT +LRKLQ ++L
Sbjct: 143 PIAVNIGKNKATPNEK-APDDYRACLRVLYPYGD---FFVVNISSPNTPDLRKLQHGEEL 198
Query: 161 KHLLKTV----VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
K LL V E + P P++VK+APD++ E + D++ + V G+I +N
Sbjct: 199 KALLDAVHGEIAEQAARTGGAP-KPVVVKLAPDMTEAELEQTVDIL--ASGGVSGIIATN 255
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT+ R + L + + GGLSG PLR +ST++I +Y+LT GKLPIIG GG+F +DA++
Sbjct: 256 TTLSR-DGLTHPNRTQQGGLSGRPLRERSTDVIRTIYRLTGGKLPIIGSGGIFDARDAYD 314
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
KI+AGASLV++YTS +Y GP +V I +EL LL +EG+ V AVGA H+
Sbjct: 315 KIRAGASLVEVYTSLIYKGPGVVRSIAAELSALLAREGFRRVGDAVGADHR 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV----VETRNQLALKPLPPILVKIA 107
+GD +FVVN+SSPNT +LRKLQ ++LK LL V E + P P++VK+A
Sbjct: 173 YGD---FFVVNISSPNTPDLRKLQHGEELKALLDAVHGEIAEQAARTGGAP-KPVVVKLA 228
Query: 108 PDLSLDEKKDIADVVLD-SVKGIL 130
PD++ E + D++ V GI+
Sbjct: 229 PDMTEAELEQTVDILASGGVSGII 252
>gi|440225462|ref|YP_007332553.1| dihydroorotate oxidase [Rhizobium tropici CIAT 899]
gi|440036973|gb|AGB70007.1| dihydroorotate oxidase [Rhizobium tropici CIAT 899]
Length = 362
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 131/211 (62%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRVADYVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLSALLSAVLS 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A K P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEEAAKAGKRIPVFLKIAPDLTEEGMDDIAAEALSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG+P+ KST ++++M + LPIIGVGGV S + A EKIKAGA LVQ+
Sbjct: 256 RQAKEAGGLSGKPVFEKSTVILAKMRRRVGAALPIIGVGGVSSAETALEKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L +I + + +LL +E S+
Sbjct: 316 YSCMVYEGPGLPAQIVAGMSKLLDRERAGSI 346
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R++ A K P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLSALLSAVLSARDEEAAKAGKRIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|148252376|ref|YP_001236961.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium sp. BTAi1]
gi|229485541|sp|A5EA61.1|PYRD_BRASB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|146404549|gb|ABQ33055.1| dihydroorotate oxidase A [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V+ I F VA YF VN+SSPNT LR LQ QL LL V+E
Sbjct: 138 VNVGANKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLRNLQQAAQLNELLSKVLE 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R+++ K P+L+KIAPDLSL E D+ V VDG+IVSNTT+ R L +
Sbjct: 198 ARDRVRRKAGDTPVLLKIAPDLSLAELDDVVHVA--RSRGVDGMIVSNTTLARPNSLREQ 255
Query: 229 YK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ +E GGLSG PL ST +++E + +G P+IGVGG+ SG A KI+AGASL+Q+
Sbjct: 256 LRAKEQGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDSGGAALTKIRAGASLIQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y+S VY G LV IK++L L + G +S+S+ VGA
Sbjct: 316 YSSLVYKGLGLVESIKADLTSTLLRTGRDSLSEIVGA 352
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL V+E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQAAQLNELLSKVLEARDRVRRKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL E LD V + + V V N + +LR +L+AK+Q
Sbjct: 217 PDLSLAE--------LDDVVHVARSRGVDGMIVSNTTLARPNSLREQLRAKEQ 261
>gi|428311045|ref|YP_007122022.1| dihydroorotate oxidase A [Microcoleus sp. PCC 7113]
gi|428252657|gb|AFZ18616.1| dihydroorotate oxidase A [Microcoleus sp. PCC 7113]
Length = 388
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 139/210 (66%), Gaps = 16/210 (7%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D + + D+ YFVVNVSSPNT LR LQ QL+ +L+T+ + N A KP IL
Sbjct: 182 DYLGSFRQLQDLGDYFVVNVSSPNTPGLRSLQDSAQLRVILETLQQENN--AQKP---IL 236
Query: 184 VKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR----YEYLDARYK---EETGG 235
VKIAPDL D IADV+ L ++ G++ +NTT+ R + ++A K EE GG
Sbjct: 237 VKIAPDLEWDA---IADVIQLAQTYQLAGIVATNTTIRRDGLKTQRIEATGKPVTEEAGG 293
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
+SG P+R +STE+I +Y+ T+G+LPIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y G
Sbjct: 294 ISGAPVRQRSTEVIRFIYQQTQGQLPIIGVGGIFTAEDAWEKITAGASLIQVYTGWIYEG 353
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
P ++ RI L + +++ G S+SQAVG A
Sbjct: 354 PWMIRRILQGLVDKVEERGLTSISQAVGLA 383
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ QL+ +L+T+ + N A K PILVKIAPDL D
Sbjct: 192 DLGDYFVVNVSSPNTPGLRSLQDSAQLRVILETLQQENN--AQK---PILVKIAPDLEWD 246
Query: 114 EKKDIADVV 122
IADV+
Sbjct: 247 A---IADVI 252
>gi|253573320|ref|ZP_04850663.1| dihydroorotate oxidase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846848|gb|EES74853.1| dihydroorotate oxidase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 367
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 152/235 (64%), Gaps = 14/235 (5%)
Query: 95 ALKPLP-PILVKIAPD-LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
ALK P PI V I + ++ +E + D K I + A +FVVN+SSPNT +LR
Sbjct: 139 ALKHRPIPIAVNIGKNKITPNE-----EAYRDYEKCISDLYEYADFFVVNISSPNTPDLR 193
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVK---PLPPILVKIAPDLSLDEKKDIADVVLDSKCKV 209
KLQ ++L LL T V+ R K +LVKIAPD+S DE + + D + +S V
Sbjct: 194 KLQHGNELASLL-TAVKDRMAAEAKRHGKSKAVLVKIAPDVSFDELEYMVDTIRNSG--V 250
Query: 210 DGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVF 269
G+I +NTT+ R + L + ETGGLSG+PL +STE+IS +Y+ T+G+LPIIG GG+F
Sbjct: 251 SGIIATNTTLSR-DGLTHQNARETGGLSGKPLNARSTEIISRVYRQTEGRLPIIGSGGIF 309
Query: 270 SGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ +DA+ KI+AGASLV+IYT+ +Y GP + ++ L +LL+++GY +S+AVGA
Sbjct: 310 TAEDAYAKIRAGASLVEIYTALIYEGPEINRKLHRGLRKLLRRDGYRHISEAVGA 364
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK---PLPPILVKIAPDL 110
+ A +FVVN+SSPNT +LRKLQ ++L LL T V+ R K +LVKIAPD+
Sbjct: 175 EYADFFVVNISSPNTPDLRKLQHGNELASLL-TAVKDRMAAEAKRHGKSKAVLVKIAPDV 233
Query: 111 SLDEKKDIADVVLDS-VKGIL 130
S DE + + D + +S V GI+
Sbjct: 234 SFDELEYMVDTIRNSGVSGII 254
>gi|383774902|ref|YP_005453971.1| dihydroorotate dehydrogenase [Bradyrhizobium sp. S23321]
gi|381363029|dbj|BAL79859.1| dihydroorotate dehydrogenase [Bradyrhizobium sp. S23321]
Length = 365
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSADRVADYVKLIETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLGRVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--D 226
R ++ K P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L D
Sbjct: 198 ARERVRQKAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARPSTLRED 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
R KE+ GGLSG PL ST +++E Y +G P+IGVGGV SG A KI+AGASL+Q
Sbjct: 256 TRAKEQ-GGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGVDSGGAALTKIRAGASLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G LV IK +L L + G +S+S+ VGA
Sbjct: 315 LYSSLVYKGLGLVDEIKRDLTSTLLRTGRDSLSEIVGA 352
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V++ R ++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLGRVIDARERVRQKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDLSL + D+ V
Sbjct: 217 PDLSLAQLDDVVQV 230
>gi|146279044|ref|YP_001169203.1| dihydroorotate dehydrogenase 2 [Rhodobacter sphaeroides ATCC 17025]
gi|145557285|gb|ABP71898.1| dihydroorotate oxidase A [Rhodobacter sphaeroides ATCC 17025]
Length = 355
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 144/231 (62%), Gaps = 9/231 (3%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P P+ V L+L KD D D + G + VNVSSPNT LR
Sbjct: 125 RLAMRPRGPVPV----GLNLGANKDSTDRAADFGAVLAACGPHVDFATVNVSSPNTERLR 180
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LL V+E R L++ P+ +KIAPDLS + +IA+V ++S + G+
Sbjct: 181 DLQGRQALTALLSGVMEVRATLSLAV--PVFLKIAPDLSDADLAEIAEVAMESG--IAGI 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
+ +NTT+ R E L + + E GGLSG PL +ST +++ + LT+G+LP+IGVGG+ S +
Sbjct: 237 VATNTTLSR-EGLQSAHAGEAGGLSGAPLFQRSTRVLARLSHLTEGRLPLIGVGGISSAE 295
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+A+ KI+AGAS VQ+YT+ VY G L RI +L+ LL+++G+ VS+AVG
Sbjct: 296 EAYAKIRAGASAVQLYTAMVYEGVGLAARIAKDLDRLLEQDGFGHVSEAVG 346
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V+E R L+L P+ +KIAPDLS + +
Sbjct: 166 FATVNVSSPNTERLRDLQGRQALTALLSGVMEVRATLSLA--VPVFLKIAPDLSDADLAE 223
Query: 118 IADVVLDS-VKGIL 130
IA+V ++S + GI+
Sbjct: 224 IAEVAMESGIAGIV 237
>gi|402771269|ref|YP_006590806.1| dihydroorotate dehydrogenase [Methylocystis sp. SC2]
gi|401773289|emb|CCJ06155.1| Dihydroorotate dehydrogenase [Methylocystis sp. SC2]
Length = 354
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 129/204 (63%), Gaps = 4/204 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V G F DVA YF +NVSSPNT LR LQ + L LL +E
Sbjct: 136 VNIGANKDAADRVADYVAGAHAFADVASYFTINVSSPNTPGLRDLQEPEALSDLLARAIE 195
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ ++ P+L+KIAPDLSL + + V D + +DG+IVSNTT+ R L +
Sbjct: 196 ARDAAPIRR--PMLLKIAPDLSLAQLDGVVRVARDKR--IDGMIVSNTTISRPATLRSPL 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E+GGLSG PL + ST ++++ + +G+ P+IGVGGV S + A KI+AGA+LVQ+Y+
Sbjct: 252 AKESGGLSGAPLFDLSTRMLAQTFLRVEGQFPLIGVGGVESAEAALAKIEAGATLVQLYS 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKE 313
+ VY GP LV IK L + L KE
Sbjct: 312 ALVYEGPALVAHIKRGLLDGLAKE 335
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G F DVA YF +NVSSPNT LR LQ + L LL +E R+ ++ P+L+
Sbjct: 151 YVAGAHAFADVASYFTINVSSPNTPGLRDLQEPEALSDLLARAIEARDAAPIR--RPMLL 208
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 159
KIAPDLSL + LD V + + + V N + A LR AK+
Sbjct: 209 KIAPDLSLAQ--------LDGVVRVARDKRIDGMIVSNTTISRPATLRSPLAKES 255
>gi|89055454|ref|YP_510905.1| dihydroorotate dehydrogenase 2 [Jannaschia sp. CCS1]
gi|88865003|gb|ABD55880.1| dihydroorotate oxidase A [Jannaschia sp. CCS1]
Length = 348
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD V D + + +NVSSPNT LR LQ K L+ ++ V
Sbjct: 135 LNLGANKDSADRVADFARVFQTCAPHIDFATINVSSPNTEKLRDLQGKAALRQIIAQVDA 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R V + +KIAPDL++DE DIA+V LDS + GLI +NTT+DR L +R+
Sbjct: 195 ARTDARVA----LFLKIAPDLTMDELADIAEVALDSPLQ--GLIATNTTLDRTG-LKSRH 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG+P+ KST ++ +Y+LT+GKLP+IGVGGV S + A+ KI+AGA+ VQ+YT
Sbjct: 248 GQEKGGLSGQPVFEKSTRTLARLYQLTEGKLPLIGVGGVASAEQAYTKIRAGATAVQLYT 307
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VY G +VT++ ++ LQ++G+ SVS A G
Sbjct: 308 GLVYGGLSMVTKMVKGVDARLQRDGFASVSDATG 341
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ +NVSSPNT LR LQ K L+ ++ V R + + +KIAPDL++DE D
Sbjct: 163 FATINVSSPNTEKLRDLQGKAALRQIIAQVDAARTDARVA----LFLKIAPDLTMDELAD 218
Query: 118 IADVVLDS 125
IA+V LDS
Sbjct: 219 IAEVALDS 226
>gi|222147463|ref|YP_002548420.1| dihydroorotate dehydrogenase 2 [Agrobacterium vitis S4]
gi|254788870|sp|B9JR03.1|PYRD_AGRVS RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|221734453|gb|ACM35416.1| dihydroorotate dehydrogenase [Agrobacterium vitis S4]
Length = 363
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF N+SSPNT LR LQAKD L HLL V+
Sbjct: 139 INIGANKDAEDRIADYVTGIRRFYPLASYFTANISSPNTPGLRDLQAKDSLGHLLDAVLA 198
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A K P+ +KIAPDL+ + DIA+VVL +DGLIVSNTT+ R D
Sbjct: 199 ARADEAAKAGRRVPVFLKIAPDLTEEGMDDIAEVVLARD--LDGLIVSNTTLSRDGLTDT 256
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R E GGLSG+PL KST +++ M LPIIGVGGV S + A EKIKAGA LVQ+
Sbjct: 257 RQAGEAGGLSGKPLFEKSTAVLARMRHRVGSALPIIGVGGVSSAQTALEKIKAGADLVQL 316
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L + L ++G S++Q
Sbjct: 317 YSCMVYEGPGLPAAIVKGLSQALDRDGIASIAQ 349
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 6 ESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSS 65
E+ +R+ +R R G G N + R+ +V GI +F +A YF N+SS
Sbjct: 121 EAAFARLSARASRPGVVGINIGANK-DAEDRIADYVT-----GIRRFYPLASYFTANISS 174
Query: 66 PNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLDEKKDIADVVL 123
PNT LR LQAKD L HLL V+ R A K P+ +KIAPDL+ + DIA+VVL
Sbjct: 175 PNTPGLRDLQAKDSLGHLLDAVLAARADEAAKAGRRVPVFLKIAPDLTEEGMDDIAEVVL 234
>gi|429327285|gb|AFZ79045.1| dihydroorotate dehydrogenase, putative [Babesia equi]
Length = 371
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 133/226 (58%), Gaps = 18/226 (7%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV-- 176
+++ D I K G A Y +N+SSPNT NLR Q K+ L ++ N++ +
Sbjct: 144 GEIIEDVTYCIKKIGCYADYIAINISSPNTPNLRDNQRKEPLLKIINASKTALNEIDIEA 203
Query: 177 -----------KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
K P + +KI+PD+S + KDIADV + +C VDGLI++NTTV R E +
Sbjct: 204 AANNLPYTNTTKERPLLFIKISPDVSAVQLKDIADVAM--QCSVDGLILTNTTVARPESV 261
Query: 226 D---ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGA 282
GGLSG+PL KS +I EMY LT GK+PII GG+ + +DA + I+AGA
Sbjct: 262 SDEVTSIGNPGGGLSGKPLLEKSRRIIHEMYSLTNGKIPIIACGGISTPEDALDMIEAGA 321
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
SL QIYT+ +Y GP L + +K L LL K GY ++SQA+GAAH S
Sbjct: 322 SLCQIYTAMIYEGPKLPSNMKKNLAYLLSKRGYTNISQAIGAAHVS 367
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL------------ 96
I K G A Y +N+SSPNT NLR Q K+ L ++ N++ +
Sbjct: 154 IKKIGCYADYIAINISSPNTPNLRDNQRKEPLLKIINASKTALNEIDIEAAANNLPYTNT 213
Query: 97 -KPLPPILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
K P + +KI+PD+S + KDIADV + SV G++
Sbjct: 214 TKERPLLFIKISPDVSAVQLKDIADVAMQCSVDGLI 249
>gi|365879391|ref|ZP_09418815.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. ORS 375]
gi|365292642|emb|CCD91346.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. ORS 375]
Length = 364
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD AD V D V+ I F VA YF VN+SSPNT LR LQ QL LL V+E R+++
Sbjct: 143 NKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLRNLQQASQLDELLSKVLEARDRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
K P+L+KIAPDLSL E D+ V VDG+IVSNTT+ R L + + +E
Sbjct: 203 RRKAGDTPVLLKIAPDLSLAELDDVVHVA--RSRGVDGMIVSNTTLARPNSLREQLRAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E + +G P+IGVGG+ +G A KI+AGASL+Q+Y+S V
Sbjct: 261 QGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDTGGAALTKIRAGASLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L + G S+S+ VGA
Sbjct: 321 YKGLGLVESIKADLTSTLLRTGRESLSEIVGA 352
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL V+E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQASQLDELLSKVLEARDRVRRKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL E LD V + + V V N + +LR +L+AK+Q
Sbjct: 217 PDLSLAE--------LDDVVHVARSRGVDGMIVSNTTLARPNSLREQLRAKEQ 261
>gi|315497877|ref|YP_004086681.1| dihydroorotate dehydrogenase [Asticcacaulis excentricus CB 48]
gi|315415889|gb|ADU12530.1| dihydroorotate dehydrogenase [Asticcacaulis excentricus CB 48]
Length = 358
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 128/217 (58%), Gaps = 4/217 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ KD D + D V G+ + ++ YF N+SSPNT LR LQ + L LL + T
Sbjct: 143 NIGANKDATDRMADYVTGLKRLWGLSSYFTANISSPNTPGLRALQGRAHLDELLGQIAAT 202
Query: 171 RNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R L PI +KIAPDLS +E D + + +D LIVSNTT++R E L +
Sbjct: 203 RTDLVRVTGNNYPIFLKIAPDLSEEEIADAVEATI--AHGLDALIVSNTTIERPESLRSD 260
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+TGGLSG PL ST + YK+ G+L +IG GG+ SG DA+ KI+AGASLVQ+Y
Sbjct: 261 LATQTGGLSGAPLFGLSTSALRSAYKVAAGRLTLIGAGGIASGADAYAKIRAGASLVQLY 320
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
++ VY GP L+ IK +L + L +G VSQAVG+
Sbjct: 321 SALVYKGPGLIDEIKRDLVQRLHADGLTHVSQAVGSG 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPI 102
++ G+ + ++ YF N+SSPNT LR LQ + L LL + TR L PI
Sbjct: 157 YVTGLKRLWGLSSYFTANISSPNTPGLRALQGRAHLDELLGQIAATRTDLVRVTGNNYPI 216
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDLS +E IAD V
Sbjct: 217 FLKIAPDLSEEE---IADAV 233
>gi|94984607|ref|YP_603971.1| dihydroorotate dehydrogenase 2 [Deinococcus geothermalis DSM 11300]
gi|166199348|sp|Q1J132.1|PYRD_DEIGD RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|94554888|gb|ABF44802.1| Dihydroorotate oxidase [Deinococcus geothermalis DSM 11300]
Length = 361
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 132/206 (64%), Gaps = 5/206 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D + + VA FVVNVSSPNT LR LQA L L++ V++ V+ L
Sbjct: 156 EAVQDYREAVRVLQAVADAFVVNVSSPNTPGLRALQAAGDLAALVRAVLDEVEAGRVRTL 215
Query: 180 --PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLS 237
PP+LVK+APDL + + VL++ DGLI+ NTT+ R E L + ETGGLS
Sbjct: 216 SRPPVLVKLAPDLHPADFEASVGAVLEAGA--DGLIIGNTTL-RREGLTHPRRGETGGLS 272
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PL +STEL+ Y+LT+G++PI+GVGG+F+ +DA+ KI+AGA LV++YT+ +Y GP
Sbjct: 273 GRPLTARSTELVRAAYRLTRGRMPIVGVGGIFTAEDAYAKIRAGARLVEVYTALIYEGPG 332
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVG 323
L R+ +L LL ++G +++AVG
Sbjct: 333 LPARLNRDLARLLARDGVRHLTEAVG 358
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDLSL 112
VA FVVNVSSPNT LR LQA L L++ V++ ++ L PP+LVK+APDL
Sbjct: 171 VADAFVVNVSSPNTPGLRALQAAGDLAALVRAVLDEVEAGRVRTLSRPPVLVKLAPDLHP 230
Query: 113 DEKKDIADVVLDSVKGILKFGD 134
+ + VL++ L G+
Sbjct: 231 ADFEASVGAVLEAGADGLIIGN 252
>gi|115377940|ref|ZP_01465124.1| dihydroorotate oxidase [Stigmatella aurantiaca DW4/3-1]
gi|310822299|ref|YP_003954657.1| dihydroorotate oxidase [Stigmatella aurantiaca DW4/3-1]
gi|115365045|gb|EAU64096.1| dihydroorotate oxidase [Stigmatella aurantiaca DW4/3-1]
gi|309395371|gb|ADO72830.1| Dihydroorotate oxidase [Stigmatella aurantiaca DW4/3-1]
Length = 370
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 133/221 (60%), Gaps = 8/221 (3%)
Query: 110 LSLDEKKD--IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
++L + KD + V D V + + Y VVN SSPNT LRKLQ +QL LL+ V
Sbjct: 144 VNLGKNKDTPLEQAVEDYVACVDTLAPLGDYVVVNASSPNTPGLRKLQEPEQLTALLRAV 203
Query: 168 VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
++A P P+ +KIAPDL+ + ++ DV L C + GLI +NTTV R
Sbjct: 204 KARLERVA--PGKPLFLKIAPDLTPEAVDEVVDVAL--ACGLSGLIATNTTVAR--PFAH 257
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+E GGLSG P+R + +I ++ + G LPIIGVGGVF+ +D +EK++AGAS+VQ+
Sbjct: 258 PLAQEAGGLSGAPVREPANAVIRRAWRRSGGTLPIIGVGGVFTAQDVYEKLRAGASVVQV 317
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
YT F+Y GP +V R+ EL+ LL G+ SV AVGA H +
Sbjct: 318 YTGFIYEGPGMVRRLVQELDALLASNGFRSVRDAVGADHAT 358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y VVN SSPNT LRKLQ +QL LL+ V ++A P P+ +KIAPDL+ + +
Sbjct: 174 YVVVNASSPNTPGLRKLQEPEQLTALLRAVKARLERVA--PGKPLFLKIAPDLTPEAVDE 231
Query: 118 IADVVL 123
+ DV L
Sbjct: 232 VVDVAL 237
>gi|167644360|ref|YP_001682023.1| dihydroorotate dehydrogenase 2 [Caulobacter sp. K31]
gi|167346790|gb|ABZ69525.1| Dihydroorotate oxidase [Caulobacter sp. K31]
Length = 354
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 130/217 (59%), Gaps = 4/217 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ KD D + D V G+ + ++ YF VN+SSPNT LR LQ K L+ LL + E
Sbjct: 140 NIGANKDATDRIADYVTGLTRLWGLSDYFTVNISSPNTPGLRALQTKAALEELLGRLAEA 199
Query: 171 RNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R L PI +K+APDL E + I + V ++G+IVSNTT+ R L +
Sbjct: 200 RGLLKAAGTVDYPIFLKVAPDLEDGEVEAIVETV--KSAGLNGIIVSNTTIARPADLASP 257
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+ E+GGLSG+PL ST +++ + G L +IG GG+ SG DA KI+AGA VQ+Y
Sbjct: 258 HAAESGGLSGKPLLAASTAMLARFHAANNGHLALIGAGGIASGADALAKIRAGACAVQLY 317
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
++ VY GP LV RIKS+L L+ EG+ SV+ A+GAA
Sbjct: 318 SALVYGGPGLVQRIKSDLAARLRAEGFASVTDAIGAA 354
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ G+ + ++ YF VN+SSPNT LR LQ K L+ LL + E R L PI
Sbjct: 154 YVTGLTRLWGLSDYFTVNISSPNTPGLRALQTKAALEELLGRLAEARGLLKAAGTVDYPI 213
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+K+APDL E + I + V
Sbjct: 214 FLKVAPDLEDGEVEAIVETV 233
>gi|365891836|ref|ZP_09430207.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. STM 3809]
gi|365332169|emb|CCE02738.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. STM 3809]
Length = 364
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD AD V D V+ I F VA YF VN+SSPNT LR LQ QL LL V+E R+++
Sbjct: 143 NKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLRNLQQASQLDELLSKVLEARDRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
K P+L+KIAPDLSL E D+ V VDG+IVSNTT+ R L + + +E
Sbjct: 203 RRKAGDTPVLLKIAPDLSLAELDDVVHVA--RSRGVDGMIVSNTTLARPNSLREQLRAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E + +G P+IGVGG+ +G A KI+AGASL+Q+Y+S V
Sbjct: 261 QGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDTGGAALTKIRAGASLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L + G S+S+ VGA
Sbjct: 321 YKGLGLVESIKADLTSTLLRTGRESLSEIVGA 352
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL V+E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQASQLDELLSKVLEARDRVRRKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL E LD V + + V V N + +LR +L+AK+Q
Sbjct: 217 PDLSLAE--------LDDVVHVARSRGVDGMIVSNTTLARPNSLREQLRAKEQ 261
>gi|367478109|ref|ZP_09477431.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. ORS 285]
gi|365269669|emb|CCD89899.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. ORS 285]
Length = 364
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD D V D VK I F VA YF VN+SSPNT LR LQ QL LL V+E R+++
Sbjct: 143 NKDSTDRVADYVKLIETFAPVASYFTVNISSPNTPGLRNLQQASQLDELLSKVLEARDRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
K P+L+KIAPDLSL E D+ V VDG+IVSNTT+ R L + + +E
Sbjct: 203 RRKAGDTPVLLKIAPDLSLAELDDVVHVA--RSRGVDGMIVSNTTLARPNSLREQLRAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E + +G P+IGVGG+ +G A KI+AGASL+Q+Y+S V
Sbjct: 261 QGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDTGGAALTKIRAGASLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L + G +S+S+ VGA
Sbjct: 321 YKGLGLVESIKADLTSTLLRTGRDSLSEIVGA 352
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL V+E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQASQLDELLSKVLEARDRVRRKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL E LD V + + V V N + +LR +L+AK+Q
Sbjct: 217 PDLSLAE--------LDDVVHVARSRGVDGMIVSNTTLARPNSLREQLRAKEQ 261
>gi|330813140|ref|YP_004357379.1| dihydroorotate dehydrogenase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486235|gb|AEA80640.1| dihydroorotate dehydrogenase [Candidatus Pelagibacter sp. IMCC9063]
Length = 351
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 131/200 (65%), Gaps = 4/200 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +K F ++ Y +N+SSPNT NLR L K +++ LL + + QL K IL
Sbjct: 151 DYLKCFEYFCNLCDYICINISSPNTPNLRDLHEKSKIEELLIAIKLKQKQLNNKT--KIL 208
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+KI+PD++ +++++VLD K +DG++++NTT+ R + L + E GGLSG+PL+
Sbjct: 209 LKISPDITSKNITELSNIVLDQK--IDGVVLTNTTISRDQKLQNSNQAELGGLSGKPLQQ 266
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
S +I + YK K+PIIG GGVF GK AF+KIK+GASLVQ+YTS VY GP +V +I
Sbjct: 267 SSNLIIQKFYKSLGTKIPIIGAGGVFDGKSAFDKIKSGASLVQLYTSMVYQGPYVVNKIN 326
Query: 304 SELEELLQKEGYNSVSQAVG 323
ELE LL+ EG+ S+ A+G
Sbjct: 327 KELEALLEAEGFESLKDAIG 346
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
F ++ Y +N+SSPNT NLR L K +++ LL + + QL K IL+KI+PD++
Sbjct: 159 FCNLCDYICINISSPNTPNLRDLHEKSKIEELLIAIKLKQKQLNNK--TKILLKISPDIT 216
Query: 112 LDEKKDIADVVLD 124
+++++VLD
Sbjct: 217 SKNITELSNIVLD 229
>gi|219126558|ref|XP_002183522.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405278|gb|EEC45222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 456
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 151/218 (69%), Gaps = 4/218 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ + K+ D + D V I + +A Y V+N+SSPNTA LR LQ + L+ LL T +
Sbjct: 209 VNIGKNKNSLDAIGDYVCNIRQLSSLADYMVLNISSPNTAGLRDLQQANSLRVLLTTCLT 268
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TRN++ + P+LVK+APDL+ +E IA+V L+ +DG+I++NTT R L +++
Sbjct: 269 TRNEMTHRV--PLLVKLAPDLTDEELDQIANVCLE--VGIDGIIITNTTNHRPADLLSKH 324
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+P++++STE I +++LT GK+PIIGVGGV SG DA+EK+KAGASLVQ+Y+
Sbjct: 325 RGEIGGLSGKPVKDQSTECIRRLFRLTDGKIPIIGVGGVGSGHDAYEKLKAGASLVQVYS 384
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VY GP +++RI+ +L L+ + G S+ +GA H+
Sbjct: 385 MMVYQGPGVISRIRHDLATLMLENGQRSIVDVIGADHE 422
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ I + +A Y V+N+SSPNTA LR LQ + L+ LL T + TRN++ + P+LV
Sbjct: 224 YVCNIRQLSSLADYMVLNISSPNTAGLRDLQQANSLRVLLTTCLTTRNEMTHR--VPLLV 281
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGILKFGDVAH 137
K+APDL+ +E IA+V L+ + GI+ H
Sbjct: 282 KLAPDLTDEELDQIANVCLEVGIDGIIITNTTNH 315
>gi|399075024|ref|ZP_10751333.1| dihydroorotate dehydrogenase, subfamily 2 [Caulobacter sp. AP07]
gi|398039643|gb|EJL32772.1| dihydroorotate dehydrogenase, subfamily 2 [Caulobacter sp. AP07]
Length = 358
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 130/217 (59%), Gaps = 4/217 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ KD AD + D V G+ + ++ YF VN+SSPNT LR LQ K L+ LL + E
Sbjct: 144 NIGANKDAADRIADYVTGLTRLWGLSDYFTVNISSPNTPGLRALQTKAALEDLLGRIAEA 203
Query: 171 RNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R L PI +K+APDL E + I V +DG+IVSNTT+ R L +
Sbjct: 204 RGLLKAAGTVDYPIFLKVAPDLEDGEVEAIVATV--KAAGLDGIIVSNTTIARPGDLASP 261
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+E GGLSG PL ST +++ + +KG+L +IG GGV SG A KI+AGAS VQ+Y
Sbjct: 262 QADEDGGLSGRPLLRASTAMLARFHAASKGELVLIGAGGVASGAHALAKIRAGASAVQLY 321
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
++ VY GP LV RIK +L L+ EG+ SV+ A+GAA
Sbjct: 322 SALVYGGPGLVERIKRDLAARLRAEGFASVTDAIGAA 358
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ G+ + ++ YF VN+SSPNT LR LQ K L+ LL + E R L PI
Sbjct: 158 YVTGLTRLWGLSDYFTVNISSPNTPGLRALQTKAALEDLLGRIAEARGLLKAAGTVDYPI 217
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+K+APDL E + I V
Sbjct: 218 FLKVAPDLEDGEVEAIVATV 237
>gi|398822867|ref|ZP_10581241.1| dihydroorotate dehydrogenase, subfamily 2 [Bradyrhizobium sp.
YR681]
gi|398226475|gb|EJN12723.1| dihydroorotate dehydrogenase, subfamily 2 [Bradyrhizobium sp.
YR681]
Length = 365
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSADRVADYVKLIETFAPVASYFTVNVSSPNTPGLRNLQEGALLDELLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--D 226
R ++ K P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L +
Sbjct: 198 ARERVRQKAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARPSTLREE 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
R KE+ GGLSG PL ST +++E Y +G P+IGVGGV SG A KI+AGASL+Q
Sbjct: 256 MRAKEQ-GGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGVDSGGAALTKIRAGASLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G LV IK +L L + G +S+S+ VGA
Sbjct: 315 LYSSLVYKGLGLVDEIKRDLTSTLLRTGRDSLSEIVGA 352
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V++ R ++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQEGALLDELLARVIDARERVRQKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL + LD V + + V V N + + LR +++AK+Q
Sbjct: 217 PDLSLAQ--------LDDVVQVARSRRVDGMIVSNTTIARPSTLREEMRAKEQ 261
>gi|146343510|ref|YP_001208558.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium sp. ORS 278]
gi|166199338|sp|A4Z2G7.1|PYRD_BRASO RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|146196316|emb|CAL80343.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. ORS 278]
Length = 364
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 135/217 (62%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V+ I F VA YF VN+SSPNT LR LQ QL LL V+E
Sbjct: 138 VNVGANKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLRNLQQASQLDDLLTKVLE 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R+++ K P+L+KIAPDLSL E D+ V VDG+IVSNTT+ R L +
Sbjct: 198 ARDRVRRKAGDTPVLLKIAPDLSLAELDDVVHVA--RSRGVDGMIVSNTTLARPNSLREQ 255
Query: 229 YK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ +E GGLSG PL ST +++E + +G P+IGVGG+ +G A KI+AGASL+Q+
Sbjct: 256 MRAKEQGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDTGGAALTKIRAGASLIQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y+S VY G LV IK++L L + G S+S+ VGA
Sbjct: 316 YSSLVYKGLGLVESIKADLTSTLLRTGRESLSEIVGA 352
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL V+E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQASQLDDLLTKVLEARDRVRRKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL E LD V + + V V N + +LR +++AK+Q
Sbjct: 217 PDLSLAE--------LDDVVHVARSRGVDGMIVSNTTLARPNSLREQMRAKEQ 261
>gi|428216513|ref|YP_007100978.1| dihydroorotate oxidase A [Pseudanabaena sp. PCC 7367]
gi|427988295|gb|AFY68550.1| dihydroorotate oxidase A [Pseudanabaena sp. PCC 7367]
Length = 370
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 146/237 (61%), Gaps = 19/237 (8%)
Query: 100 PPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 159
PP + I +L + + + D + +F + YFVVNVSSPNT LR LQA D
Sbjct: 144 PPTM-PIGINLGKSKVTALENASDDYLTSFRRFQALGDYFVVNVSSPNTPGLRDLQAIDS 202
Query: 160 LKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTT 218
L ++ T+ Q A + PILVKIAPDLS DI VV L ++ G+I +NTT
Sbjct: 203 LAKIITTL-----QQANQANKPILVKIAPDLS---DADIRQVVQLSMSEQIAGIIATNTT 254
Query: 219 VDRYEYLDAR--------YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFS 270
+ R + L R +ETGG+SG PLR++STE+I +++ T G+LPIIGVGG+F+
Sbjct: 255 I-RRDNLSTRKLGATGKSITDETGGISGMPLRSRSTEVIKLIWQETHGQLPIIGVGGIFT 313
Query: 271 GKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
G DA+EKI AGA++VQ+YT +VY GP ++ I +L + L+ G +++S+AVG AHK
Sbjct: 314 GTDAWEKITAGATMVQLYTGWVYGGPGVIRSILQDLVQRLETAGLSNISEAVGLAHK 370
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L +F + YFVVNVSSPNT LR LQA D L ++ T+ Q A + PILV
Sbjct: 168 YLTSFRRFQALGDYFVVNVSSPNTPGLRDLQAIDSLAKIITTL-----QQANQANKPILV 222
Query: 105 KIAPDLSLDEKKDIADVVL-DSVKGIL 130
KIAPDLS + + + + + + + GI+
Sbjct: 223 KIAPDLSDADIRQVVQLSMSEQIAGII 249
>gi|209883824|ref|YP_002287680.1| dihydroorotate dehydrogenase 2 [Oligotropha carboxidovorans OM5]
gi|337742464|ref|YP_004634192.1| dihydroorotate dehydrogenase PyrD [Oligotropha carboxidovorans OM5]
gi|386031429|ref|YP_005952204.1| dihydroorotate dehydrogenase PyrD [Oligotropha carboxidovorans OM4]
gi|209872020|gb|ACI91816.1| dihydroorotate oxidase [Oligotropha carboxidovorans OM5]
gi|336096495|gb|AEI04321.1| dihydroorotate dehydrogenase PyrD [Oligotropha carboxidovorans OM4]
gi|336100128|gb|AEI07951.1| dihydroorotate dehydrogenase PyrD [Oligotropha carboxidovorans OM5]
Length = 364
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ AD D V I F VA YF VN+SSPNT LR LQ L LL VVE
Sbjct: 138 VNLGANKNSADRTADYVTLIEAFAQVASYFTVNISSPNTPGLRNLQQASALDDLLARVVE 197
Query: 170 TRNQLAVKPLP-PILVKIAPDLSLDEKKDIADVVLDSKCK-VDGLIVSNTTVDRYEYLDA 227
RN + P P+L+KI+PDL+L E + DVV ++ + +DG+IVSNTT+ R L
Sbjct: 198 ARNSTPAEAGPVPLLLKISPDLTLGE---LDDVVHIARVRGIDGMIVSNTTLARPASLRE 254
Query: 228 R-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
R E GGLSG PL+ ST +++E Y +G P+IGVGG+ SG A KI+AGASL+Q
Sbjct: 255 RGLALEQGGLSGRPLQRLSTRMVAETYVRVEGAFPLIGVGGIDSGGAALMKIRAGASLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G LV IK++L L++ G +S+S+ VGA
Sbjct: 315 VYSSLVYKGLGLVEAIKTDLLSTLRRTGRDSLSEIVGA 352
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIA 107
I F VA YF VN+SSPNT LR LQ L LL VVE RN + P P+L+KI+
Sbjct: 157 IEAFAQVASYFTVNISSPNTPGLRNLQQASALDDLLARVVEARNSTPAEAGPVPLLLKIS 216
Query: 108 PDLSLDEKKDIADVVLDSVKGI 129
PDL+L E D+ + V+GI
Sbjct: 217 PDLTLGELDDVVHIA--RVRGI 236
>gi|222084799|ref|YP_002543328.1| dihydroorotate dehydrogenase 2 [Agrobacterium radiobacter K84]
gi|398379750|ref|ZP_10537870.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium sp. AP16]
gi|254788869|sp|B9J901.1|PYRD_AGRRK RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|221722247|gb|ACM25403.1| dihydroorotate oxidase [Agrobacterium radiobacter K84]
gi|397722382|gb|EJK82926.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium sp. AP16]
Length = 362
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 139/231 (60%), Gaps = 4/231 (1%)
Query: 92 NQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANL 151
++ AL+ L PI +++ KD AD + D V GI +F VA YF N+SSPNT L
Sbjct: 120 HEAALRRLQPIRGNGIIGVNIGANKDSADRIADYVAGIRRFYSVARYFTANISSPNTPGL 179
Query: 152 RKLQAKDQLKHLLKTVVETRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKV 209
R LQA++ L LL V+ R+ A K P+ +KIAPDL+ + DIA VL +
Sbjct: 180 RDLQARESLSALLSAVLAARDDEAAKAGKKIPVFLKIAPDLTEEGMDDIAAEVL--AHAL 237
Query: 210 DGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVF 269
DGLIVSNTT+ R D +E GGLSG+P+ +ST ++++M + LPIIGVGGV
Sbjct: 238 DGLIVSNTTLSRDGLKDQVQAKEAGGLSGKPVFERSTVVLAKMRRRVGAALPIIGVGGVS 297
Query: 270 SGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
S + A EKI+AGA LVQ+Y+ VY GP L R+ + L +LL +E S+ +
Sbjct: 298 SAETALEKIRAGADLVQLYSCMVYEGPGLPGRVVAGLSKLLDRERVASIRE 348
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R+ A K P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLSALLSAVLAARDDEAAKAGKKIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|57238912|ref|YP_180048.1| dihydroorotate dehydrogenase 2 [Ehrlichia ruminantium str.
Welgevonden]
gi|58578844|ref|YP_197056.1| dihydroorotate dehydrogenase 2 [Ehrlichia ruminantium str.
Welgevonden]
gi|58616902|ref|YP_196101.1| dihydroorotate dehydrogenase 2 [Ehrlichia ruminantium str. Gardel]
gi|57160991|emb|CAH57897.1| dihydroorotate dehydrogenase [Ehrlichia ruminantium str.
Welgevonden]
gi|58416514|emb|CAI27627.1| Conserved hypothetical protein (similar to eukaryotic
dihydroorotate dehydrogenase) [Ehrlichia ruminantium
str. Gardel]
gi|58417470|emb|CAI26674.1| Conserved hypothetical protein (similar to eukaryotic
dihydroorotate dehydrogenase) [Ehrlichia ruminantium
str. Welgevonden]
Length = 346
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 135/202 (66%), Gaps = 2/202 (0%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPP 181
V D + + K +++Y +N+SSPNT LR Q ++ L LL + + R P
Sbjct: 144 VQDYFELVKKIYGLSNYITLNISSPNTPGLRNFQKQELLSELLTAISQVRKLTDYAESVP 203
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
I++KI+PD+S +EK+DI D+ L K KV GLI+SNT+ + ++ L+ Y GGLSG+P+
Sbjct: 204 IMLKISPDISDNEKQDIVDLSL--KYKVSGLIISNTSSEYHKLLENSYTNIQGGLSGKPI 261
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ ST+++SE+YK+T+ KL +IG GGV SG A+EKIKAGASL+Q+YT+ VYHG + +
Sbjct: 262 FDLSTKVLSEVYKITQQKLLLIGCGGVSSGYHAYEKIKAGASLIQLYTAIVYHGFNIANK 321
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
I EL ELL +G+ +VS A+G
Sbjct: 322 ISLELAELLSADGFPTVSHAIG 343
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
K +++Y +N+SSPNT LR Q ++ L LL + + R PI++KI+PD+
Sbjct: 153 KIYGLSNYITLNISSPNTPGLRNFQKQELLSELLTAISQVRKLTDYAESVPIMLKISPDI 212
Query: 111 SLDEKKDIADVVL 123
S +EK+DI D+ L
Sbjct: 213 SDNEKQDIVDLSL 225
>gi|56697745|ref|YP_168115.1| dihydroorotate dehydrogenase 2 [Ruegeria pomeroyi DSS-3]
gi|56679482|gb|AAV96148.1| dihydroorotate dehydrogenase [Ruegeria pomeroyi DSS-3]
Length = 350
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 136/214 (63%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD +D D + + + VNVSSPNT LR LQ + L LL V+E
Sbjct: 135 LNLGANKDSSDRPGDFARVLAHCAAHLDFATVNVSSPNTEKLRDLQGRAALTALLSGVIE 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR+ LA +P+P + +KIAPDLS DE DIA V D+ VD +I +NTT+ R E L + +
Sbjct: 195 TRDALA-RPIP-VFLKIAPDLSKDEIADIAAVARDTG--VDAVIATNTTLSR-EGLHSAH 249
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K+E GGLSG PL +KST +++ + LT G +P+IGVGG+ + + A+ KI+AGAS VQ YT
Sbjct: 250 KDEAGGLSGAPLFDKSTRVLARLSALTDGAIPLIGVGGISNAEQAYAKIRAGASAVQFYT 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L I L+ LL ++G+ SV++AVG
Sbjct: 310 AMVYGGLALAAEIARGLDALLARDGFASVAEAVG 343
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V+ETR+ LA +P+ P+ +KIAPDLS DE D
Sbjct: 163 FATVNVSSPNTEKLRDLQGRAALTALLSGVIETRDALA-RPI-PVFLKIAPDLSKDEIAD 220
Query: 118 IADVVLDS 125
IA V D+
Sbjct: 221 IAAVARDT 228
>gi|300021949|ref|YP_003754560.1| dihydroorotate dehydrogenase [Hyphomicrobium denitrificans ATCC
51888]
gi|299523770|gb|ADJ22239.1| dihydroorotate dehydrogenase [Hyphomicrobium denitrificans ATCC
51888]
Length = 362
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 137/220 (62%), Gaps = 5/220 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D D KGI F +VA YF VN+SSPNT LR LQA L LL V+
Sbjct: 139 VNIGANKDSTDRPGDYAKGIETFSNVASYFTVNISSPNTPGLRDLQAPAALDELLSRVMN 198
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ + +P PI+VKIAPD++ D+ I D ++ VDG+ VSNTT+ R DA
Sbjct: 199 ARDRAVSQGVPRRPIVVKIAPDVAQDDIAPICDRLV--AHAVDGIAVSNTTLSRDGLTDA 256
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ ++GGLSG PL +ST +++ +++ T G++P+IG+GG+ SG+ A EKI+AGA+L+Q+
Sbjct: 257 Q-STKSGGLSGRPLFRRSTVMLARVFEQTGGRIPLIGIGGIDSGETALEKIEAGATLLQV 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
YT VY GP L+ IKS L ++ GY+ + G K
Sbjct: 316 YTGLVYAGPGLIGEIKSHLARDARRRGYSDIGALRGTKAK 355
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
+ GI F +VA YF VN+SSPNT LR LQA L LL V+ R++ + +P PI
Sbjct: 154 YAKGIETFSNVASYFTVNISSPNTPGLRDLQAPAALDELLSRVMNARDRAVSQGVPRRPI 213
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGI 129
+VKIAPD++ D+ I D +V +V GI
Sbjct: 214 VVKIAPDVAQDDIAPICDRLVAHAVDGI 241
>gi|456352277|dbj|BAM86722.1| dihydroorotate dehydrogenase 2 [Agromonas oligotrophica S58]
Length = 364
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD AD V D V+ I F VA YF VN+SSPNT LR LQ QL LL V+E R+++
Sbjct: 143 NKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLRNLQQAAQLDDLLAKVLEARDRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
K P+L+KIAPDLSL E D V VDG+IVSNTT+ R L + + +E
Sbjct: 203 RRKSGDTPVLLKIAPDLSLAELDDAVHVA--RSRGVDGMIVSNTTLARPNTLREQMRAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E + +G P+IGVGG+ SG A KI+AGASL+Q+Y+S V
Sbjct: 261 QGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDSGGAALTKIRAGASLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L + G +S+S+ VGA
Sbjct: 321 YKGLGLVESIKADLTSTLLRTGRDSLSEIVGA 352
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL V+E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQAAQLDDLLAKVLEARDRVRRKSGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVN--VSSPNTANLRKLQAKDQ 159
PDLSL E LD + + V V N ++ PNT +++AK+Q
Sbjct: 217 PDLSLAE--------LDDAVHVARSRGVDGMIVSNTTLARPNTLR-EQMRAKEQ 261
>gi|115522747|ref|YP_779658.1| dihydroorotate dehydrogenase 2 [Rhodopseudomonas palustris BisA53]
gi|122297634|sp|Q07TQ6.1|PYRD_RHOP5 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|115516694|gb|ABJ04678.1| dihydroorotate oxidase A [Rhodopseudomonas palustris BisA53]
Length = 364
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D V+ I F VA YF VNVSSPNT LR LQ L LL V+E
Sbjct: 138 VNVGANKDSEDRVADYVRLIEMFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLAKVIE 197
Query: 170 TRNQL-AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--D 226
R ++ A+ P+L+KIAPDL+L+E D+ + KVDG+IV+NTT+ R L
Sbjct: 198 ARERVRAIAGDTPVLLKIAPDLTLNELDDVVHIA--RSRKVDGMIVANTTLSRTHTLREQ 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
AR KE+ GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGASL+Q
Sbjct: 256 ARAKEQ-GGLSGRPLFRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALTKIRAGASLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y++ +Y G LV IK +L L + G + +S+ VGA
Sbjct: 315 LYSALIYKGLGLVESIKQDLASTLLRTGRDQLSEIVGA 352
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKPLPPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V+E R ++ A+ P+L+KIA
Sbjct: 157 IEMFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLAKVIEARERVRAIAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDL+L+E LD V I + V V N + T LR + +AK+Q
Sbjct: 217 PDLTLNE--------LDDVVHIARSRKVDGMIVANTTLSRTHTLREQARAKEQ 261
>gi|320334617|ref|YP_004171328.1| Dihydroorotate dehydrogenase [Deinococcus maricopensis DSM 21211]
gi|319755906|gb|ADV67663.1| Dihydroorotate dehydrogenase [Deinococcus maricopensis DSM 21211]
Length = 356
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 134/202 (66%), Gaps = 5/202 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL--PP 181
D G+ DVA FVVNVSSPNT LR LQ D L+ LL V+ V+ P
Sbjct: 155 DYRAGVRALWDVADAFVVNVSSPNTPGLRALQHGDDLRALLTEVMHEAEMQRVRTALRRP 214
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVK+APDL+ +E + + L ++GLI++NTT+ R E L ++E+TGGLSG PL
Sbjct: 215 VLVKLAPDLTGEELEVSVEAAL--TAGIEGLILTNTTLSR-EGLTHAHREQTGGLSGRPL 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ST+L+ + Y+LT+G++PI+GVGGVF+ +DA +KI AGA+LV++YT+ +Y GP +V
Sbjct: 272 TARSTQLVRDAYRLTRGRVPIVGVGGVFTAQDALDKITAGANLVELYTALIYRGPGVVRA 331
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
+ + L L++ G+ +V++A+G
Sbjct: 332 LNAGLTRRLRERGFRNVAEAIG 353
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE----TRNQLALKP 98
Q + G+ DVA FVVNVSSPNT LR LQ D L+ LL V+ R + AL+
Sbjct: 154 QDYRAGVRALWDVADAFVVNVSSPNTPGLRALQHGDDLRALLTEVMHEAEMQRVRTALR- 212
Query: 99 LPPILVKIAPDLSLDE 114
P+LVK+APDL+ +E
Sbjct: 213 -RPVLVKLAPDLTGEE 227
>gi|197103908|ref|YP_002129285.1| dihydroorotate dehydrogenase 2 [Phenylobacterium zucineum HLK1]
gi|196477328|gb|ACG76856.1| dihydroorotate oxidase [Phenylobacterium zucineum HLK1]
Length = 349
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 3/214 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ KD D D V + + +A YF VN+SSPNT LR LQ K L+ LL + E
Sbjct: 138 NIGANKDSEDRAADYVACLKRLWGLASYFTVNISSPNTPGLRALQTKAALEDLLGRLAEA 197
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R+ L P+ +K+APDL E + I +VV + + G+IVSNTT+ R L +R++
Sbjct: 198 RDSLPPAGRVPMFLKVAPDLEDAEVEAITEVV--AAHGLSGIIVSNTTIGR-PALRSRFR 254
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+E GGLSG PL+ + E + + +G+L +IG GG+ SG DA+ +I+AGAS VQ+Y++
Sbjct: 255 DEAGGLSGAPLKGLAAERLERFAEAAQGRLTLIGAGGIASGADAYARIRAGASAVQLYSA 314
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
V+ GP L TRIK EL + L+ +G+ S+ AVGA
Sbjct: 315 LVFEGPGLATRIKRELAQRLRADGFASLGDAVGA 348
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+A YF VN+SSPNT LR LQ K L+ LL + E R+ L P+ +K+APDL E
Sbjct: 162 LASYFTVNISSPNTPGLRALQTKAALEDLLGRLAEARDSLPPAGRVPMFLKVAPDLEDAE 221
Query: 115 KKDIADVV 122
+ I +VV
Sbjct: 222 VEAITEVV 229
>gi|86751720|ref|YP_488216.1| dihydroorotate dehydrogenase 2 [Rhodopseudomonas palustris HaA2]
gi|123003591|sp|Q2IR55.1|PYRD_RHOP2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|86574748|gb|ABD09305.1| dihydroorotate oxidase A [Rhodopseudomonas palustris HaA2]
Length = 364
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 129/212 (60%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD D V D V I F VA YF VNVSSPNT LR LQ L LL V+E R ++
Sbjct: 143 NKDSTDRVADYVSLIETFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIEARERV 202
Query: 175 -AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
A P+L+KIAPDL+L E D+ + +VDG+IV+NTT+ R L R + E
Sbjct: 203 RASAGDTPVLLKIAPDLTLSELDDVVHIA--RSRRVDGMIVANTTLSRSPMLRERTRLNE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGASLVQ+Y++ +
Sbjct: 261 QGGLSGRPLFRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALTKIRAGASLVQLYSALI 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L + G +S+S+ VGA
Sbjct: 321 YKGLGLVDSIKADLASTLLRTGRDSLSEIVGA 352
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKPLPPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V+E R ++ A P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIEARERVRASAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDL+L E D+ +
Sbjct: 217 PDLTLSELDDVVHI 230
>gi|254511461|ref|ZP_05123528.1| dihydroorotate oxidase [Rhodobacteraceae bacterium KLH11]
gi|221535172|gb|EEE38160.1| dihydroorotate oxidase [Rhodobacteraceae bacterium KLH11]
Length = 352
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 137/215 (63%), Gaps = 5/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + + VNVSSPNT LR LQ K L LL V+E
Sbjct: 137 LNLGANKDSDDRPGDFARVLAHCAAHLDFATVNVSSPNTEKLRDLQGKAALNALLSGVIE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TRN L +PLP + +KIAPDLS E +DIA+V ++ VD +I +NTT+ R + L +
Sbjct: 197 TRNALP-RPLP-VFLKIAPDLSEAELQDIAEVA--TETGVDAVIATNTTLSR-DGLRSAD 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K++ GGLSG PL KST +++++ KLT G +P+IGVGG+ + + A+ KI AGAS VQ YT
Sbjct: 252 KDQAGGLSGAPLFEKSTRVLAQLSKLTNGDIPLIGVGGISTAEQAYAKICAGASAVQFYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G L I L+ELL ++G+NSV+QAVG+
Sbjct: 312 AMVYGGISLAADIAHGLDELLARDGFNSVAQAVGS 346
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ETRN L +PL P+ +KIAPDLS E +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALNALLSGVIETRNALP-RPL-PVFLKIAPDLSEAELQD 222
Query: 118 IADVVLDS 125
IA+V ++
Sbjct: 223 IAEVATET 230
>gi|91975268|ref|YP_567927.1| dihydroorotate dehydrogenase 2 [Rhodopseudomonas palustris BisB5]
gi|123763054|sp|Q13D13.1|PYRD_RHOPS RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|91681724|gb|ABE38026.1| dihydroorotate oxidase A [Rhodopseudomonas palustris BisB5]
Length = 364
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 134/219 (61%), Gaps = 8/219 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD +D V D V I F VA YF VNVSSPNT LR LQ L LL V+E
Sbjct: 138 VNVGANKDSSDRVADYVALIETFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIE 197
Query: 170 TRNQLAVKPLP---PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
R + V+P P+L+KIAPDL+L E D+ + KVDG+IV+NTT+ R L
Sbjct: 198 ARER--VRPSAGDTPVLLKIAPDLTLGELDDVVHIA--RSRKVDGMIVANTTLSRSPLLR 253
Query: 227 ARYK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
R + E GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGASLV
Sbjct: 254 ERTRMNEQGGLSGRPLFRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALTKIRAGASLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Q+Y++ +Y G LV IK++L L + G +S+++ VGA
Sbjct: 314 QLYSALIYKGLGLVESIKTDLASTLLRTGRDSLAEIVGA 352
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 6 ESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSS 65
E+ R+ +R + G G N SS R+ +V I F VA YF VNVSS
Sbjct: 120 EAVLRRLAARAQQGGILGVNVGANKDSS-DRVADYVAL-----IETFAPVASYFTVNVSS 173
Query: 66 PNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP---PILVKIAPDLSLDEKKDIADV 121
PNT LR LQ L LL V+E R + ++P P+L+KIAPDL+L E D+ +
Sbjct: 174 PNTPGLRNLQQAAALDDLLARVIEARER--VRPSAGDTPVLLKIAPDLTLGELDDVVHI 230
>gi|408379864|ref|ZP_11177455.1| dihydroorotate dehydrogenase 2 [Agrobacterium albertimagni AOL15]
gi|407746241|gb|EKF57766.1| dihydroorotate dehydrogenase 2 [Agrobacterium albertimagni AOL15]
Length = 362
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQAK+ L LL V+
Sbjct: 138 VNIGANKDATDRIADYVAGIRRFYPVATYFTANISSPNTPGLRDLQAKESLDALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ +++ P+ +KIAPDL+ + DIA+V + +DGLIVSNTT+ R D
Sbjct: 198 ARSEESLRAGKRLPVFLKIAPDLTDEGMDDIAEVA--AAHDLDGLIVSNTTLSRDGLTDP 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL +KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 TLAGEAGGLSGAPLFDKSTAVLARMRKRVGPALPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L RI L LL +E +VS+
Sbjct: 316 YSFMVYEGPALPGRILRGLSSLLDREQVANVSE 348
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQAK+ L LL V+ R++ +L+ P+
Sbjct: 153 YVAGIRRFYPVATYFTANISSPNTPGLRDLQAKESLDALLSAVLAARSEESLRAGKRLPV 212
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDL+ + DIA+V
Sbjct: 213 FLKIAPDLTDEGMDDIAEVA 232
>gi|406922586|gb|EKD60024.1| hypothetical protein ACD_54C00986G0001, partial [uncultured
bacterium]
Length = 204
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 126/186 (67%), Gaps = 5/186 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
+ VNVSSPNT LR LQ + L LL V+ETR LA P+P + +KIAPDL+ DE +
Sbjct: 17 FATVNVSSPNTEKLRDLQGRAALSALLAGVMETRAALA-NPIP-VFLKIAPDLTADELAE 74
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
IA+V L S + G+I +NTT+ R L A K +TGGLSG PL KST +++++ +LT
Sbjct: 75 IAEVALASG--LAGIIATNTTLSREGLLSAN-KSQTGGLSGAPLFEKSTRVLAQLSQLTA 131
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNS 317
GKLP+IGVGG+ S ++A+ KI GAS VQ YT+ VY G L +I L+ LLQ++GY +
Sbjct: 132 GKLPLIGVGGISSAEEAYVKILVGASAVQFYTAMVYQGISLAAKIARGLDALLQRDGYAN 191
Query: 318 VSQAVG 323
V++AVG
Sbjct: 192 VAEAVG 197
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V+ETR LA P+ P+ +KIAPDL+ DE +
Sbjct: 17 FATVNVSSPNTEKLRDLQGRAALSALLAGVMETRAALA-NPI-PVFLKIAPDLTADELAE 74
Query: 118 IADVVLDS-VKGIL 130
IA+V L S + GI+
Sbjct: 75 IAEVALASGLAGII 88
>gi|153007749|ref|YP_001368964.1| dihydroorotate dehydrogenase 2 [Ochrobactrum anthropi ATCC 49188]
gi|166199372|sp|A6WVY1.1|PYRD_OCHA4 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|151559637|gb|ABS13135.1| Dihydroorotate oxidase [Ochrobactrum anthropi ATCC 49188]
Length = 364
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA+D L+ LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQARDSLRELLSRVLE 197
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ P+ +KIAPDL+ +E DIA ++ K+DG+I+SNTT+ R A
Sbjct: 198 ARNEEGKMCTLKRPVFLKIAPDLANEELDDIAAEA--TEQKLDGIIISNTTLSRAGLKSA 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
++ETGGLSG PL ++ST +++ M + +P+IGVGGV S + A KIKAGA LVQ+
Sbjct: 256 ENRDETGGLSGAPLFDRSTIVLARMRERVGPDMPLIGVGGVDSAETALTKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
YT +Y GP L I L +++EG +++
Sbjct: 316 YTGLIYRGPNLPAEIVRGLSAAVKREGVTNIA 347
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 20/153 (13%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA+D L+ LL V+E RN+ LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQARDSLRELLSRVLEARNEEGKMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDI-ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 159
P+ +KIAPDL+ +E DI A+ + GI +++ ++ + A L+ + +D+
Sbjct: 211 PVFLKIAPDLANEELDDIAAEATEQKLDGI----------IISNTTLSRAGLKSAENRDE 260
Query: 160 LKHLLKTVVETRNQLAVKPLPPILVKIAPDLSL 192
L + R+ + L + ++ PD+ L
Sbjct: 261 TGGLSGAPLFDRSTIV---LARMRERVGPDMPL 290
>gi|403221753|dbj|BAM39885.1| dihydroorotate dehydrogenase, mitochondrial precursor [Theileria
orientalis strain Shintoku]
Length = 433
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 135/224 (60%), Gaps = 18/224 (8%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL---- 174
D++ D V I K G A Y VNVSSPNT NLR Q ++ L L++T E N+L
Sbjct: 209 GDILSDVVCCIRKIGAYADYVAVNVSSPNTPNLRDNQRREPLIKLVETSKEALNELDKRV 268
Query: 175 ---------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR---Y 222
K P +L KI+PD++ +E +D+A++ L K ++DGLIV+NTTV R
Sbjct: 269 ASGDVSYINTTKTKPLLLFKISPDMTKEEMEDVAEIAL--KHRLDGLIVTNTTVSRPEEI 326
Query: 223 EYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGA 282
+ + GGLSG+PL+ S + EMYK+T GK+PII GG+ + DA E I+AGA
Sbjct: 327 KEELEKIGNPGGGLSGKPLKELSKRAVFEMYKMTSGKVPIIACGGISTADDALEMIEAGA 386
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
S QI+T+ VY GP L + +K L LLQK+GY S+ +A+GAAH
Sbjct: 387 SACQIFTALVYKGPGLPSAMKKNLASLLQKKGYKSIREAIGAAH 430
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------A 95
I K G A Y VNVSSPNT NLR Q ++ L L++T E N+L
Sbjct: 219 IRKIGAYADYVAVNVSSPNTPNLRDNQRREPLIKLVETSKEALNELDKRVASGDVSYINT 278
Query: 96 LKPLPPILVKIAPDLSLDEKKDIADVVL 123
K P +L KI+PD++ +E +D+A++ L
Sbjct: 279 TKTKPLLLFKISPDMTKEEMEDVAEIAL 306
>gi|255020861|ref|ZP_05292917.1| Dihydroorotate dehydrogenase [Acidithiobacillus caldus ATCC 51756]
gi|254969652|gb|EET27158.1| Dihydroorotate dehydrogenase [Acidithiobacillus caldus ATCC 51756]
Length = 367
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V + ++ + + + V D I + G A Y +NVSSPNT LR+LQ L
Sbjct: 138 PLTVPLGINIGKNRETPLTAAVGDYRALIQQLGPFADYISINVSSPNTPELRRLQDPQSL 197
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
+ LL+ + E R +L +P P+L+KIAPDL+ DE +A + + + +DG I +NTT+
Sbjct: 198 RPLLQELREARQKLQRQP--PLLLKIAPDLAPDEVTALAALAQEPQPLLDGFIATNTTLG 255
Query: 221 RYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKA 280
R D + E GGLSG PL+ ++ +I+++Y+ + G+LPIIGVGGV + +D +KI+A
Sbjct: 256 RPS--DWPHPAEAGGLSGAPLKRRANGIIAQLYRASSGRLPIIGVGGVATAQDVLDKIEA 313
Query: 281 GASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GASLVQ+YT+ +Y GP LV +I L ELL G + + VG
Sbjct: 314 GASLVQLYTALIYEGPDLVQQITDALPELLTDRGVDHLGALVG 356
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
I + G A Y +NVSSPNT LR+LQ L+ LL+ + E R +L + PP+L+KIAP
Sbjct: 166 IQQLGPFADYISINVSSPNTPELRRLQDPQSLRPLLQELREARQKLQRQ--PPLLLKIAP 223
Query: 109 DLSLDEKKDIA 119
DL+ DE +A
Sbjct: 224 DLAPDEVTALA 234
>gi|399155862|ref|ZP_10755929.1| dihydroorotate dehydrogenase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 385
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 133/190 (70%), Gaps = 5/190 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL--PPILVKIAPDLSLD 193
A YF +N+SSPNT +LR LQ KD L+ LL +V R++L P+LVK++PD+ D
Sbjct: 196 ADYFTLNISSPNTEDLRNLQEKDALRVLLDSVCACRDKLDQNHSRKTPLLVKLSPDM--D 253
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E + + + + + G+IV+NTTV R E L ++ + E+GGLSG+PL+ +STE+I ++
Sbjct: 254 ETALESSIHVMKEFSIQGVIVANTTVKRPE-LKSKQRNESGGLSGKPLQKRSTEMIRTVF 312
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
+ ++PIIGVGG+FSG DA++KI+AGAS VQIYT+ +Y GP V ++K EL +LL ++
Sbjct: 313 QKLGTEIPIIGVGGIFSGADAYDKIRAGASAVQIYTALIYEGPGQVRKVKRELAKLLNED 372
Query: 314 GYNSVSQAVG 323
G+ SVS AVG
Sbjct: 373 GFTSVSVAVG 382
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDL 110
A YF +N+SSPNT +LR LQ KD L+ LL +V R++L P+LVK++PD+
Sbjct: 196 ADYFTLNISSPNTEDLRNLQEKDALRVLLDSVCACRDKLDQNHSRKTPLLVKLSPDM 252
>gi|404317278|ref|ZP_10965211.1| dihydroorotate dehydrogenase 2 [Ochrobactrum anthropi CTS-325]
Length = 364
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA+D L+ LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQARDSLRELLSRVLE 197
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ P+ +KIAPDL+ +E DIA ++ K+DG+I+SNTT+ R A
Sbjct: 198 ARNEEGKMCTLKRPVFLKIAPDLTNEELDDIAAEA--TEQKLDGIIISNTTLSRAGLKSA 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
++ETGGLSG PL ++ST +++ M + +P+IGVGGV S + A KIKAGA LVQ+
Sbjct: 256 ENRDETGGLSGAPLFDRSTIVLARMRERVGPDMPLIGVGGVDSAETALTKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
YT +Y GP L I L +++EG +++
Sbjct: 316 YTGLIYRGPNLPAEIVRGLSAAVKREGVTNIA 347
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 20/153 (13%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA+D L+ LL V+E RN+ LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQARDSLRELLSRVLEARNEEGKMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDI-ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 159
P+ +KIAPDL+ +E DI A+ + GI +++ ++ + A L+ + +D+
Sbjct: 211 PVFLKIAPDLTNEELDDIAAEATEQKLDGI----------IISNTTLSRAGLKSAENRDE 260
Query: 160 LKHLLKTVVETRNQLAVKPLPPILVKIAPDLSL 192
L + R+ + L + ++ PD+ L
Sbjct: 261 TGGLSGAPLFDRSTIV---LARMRERVGPDMPL 290
>gi|421596280|ref|ZP_16040137.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium sp. CCGE-LA001]
gi|404271611|gb|EJZ35434.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium sp. CCGE-LA001]
Length = 365
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSPDRVADYVKLIETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DA 227
R ++ K P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L +
Sbjct: 198 ARERVRQKAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARNSTLRET 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+E GGLSG PL ST +++E Y +G P+IGVGGV SG A KI+AGASL+Q+
Sbjct: 256 TRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGVDSGGAALTKIRAGASLIQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y+S VY G LV IK +L L + G +S+S+ VGA
Sbjct: 316 YSSLVYKGLGLVDEIKRDLASTLLRTGRDSLSEIVGA 352
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V++ R ++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVIDARERVRQKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDLSL + D+ V
Sbjct: 217 PDLSLAQLDDVVQV 230
>gi|298491252|ref|YP_003721429.1| dihydroorotate dehydrogenase ['Nostoc azollae' 0708]
gi|298233170|gb|ADI64306.1| dihydroorotate dehydrogenase ['Nostoc azollae' 0708]
Length = 377
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 152/265 (57%), Gaps = 19/265 (7%)
Query: 69 ANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKG 128
A L ++ + + + + + NQ + +P I +L + +A D ++
Sbjct: 124 AALNRMGFNNSGAYAMAARLTSSNQEESRSIP-----IGINLGKSKITPLAAAAQDYLES 178
Query: 129 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAP 188
D+ YFVVNVSSPNT LR LQ L H+L +++T N+L P+ VKIAP
Sbjct: 179 FRLLKDLGDYFVVNVSSPNTPGLRALQNAAVLGHILD-LLQTENKLQ----KPLFVKIAP 233
Query: 189 DLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPL 241
DL D DI + L K+ GLI +NTT+ R E +EE GG+SG PL
Sbjct: 234 DLEWDAITDIIN--LAQTYKLAGLIATNTTISREGLKTQIIEKTGKTPQEEAGGISGAPL 291
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
++STE+I +Y+ T+G++PIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y GP +V R
Sbjct: 292 CDRSTEVIRFIYQQTQGQIPIIGVGGIFTPEDAWEKITAGASLIQVYTGWIYEGPMMVRR 351
Query: 302 IKSELEELLQKEGYNSVSQAVGAAH 326
I S L L++ G S+S+AVG +
Sbjct: 352 ILSGLLTKLEENGLTSISEAVGTVN 376
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ L H+L +++T N+L P+ VKIAPDL D
Sbjct: 184 DLGDYFVVNVSSPNTPGLRALQNAAVLGHILD-LLQTENKLQ----KPLFVKIAPDLEWD 238
Query: 114 EKKDIADVV 122
DI ++
Sbjct: 239 AITDIINLA 247
>gi|365901876|ref|ZP_09439700.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. STM 3843]
gi|365417343|emb|CCE12242.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis)
[Bradyrhizobium sp. STM 3843]
Length = 364
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD D V D V+ I F VA YF VN+SSPNT LR LQ QL LL +E R+++
Sbjct: 143 NKDSTDRVADYVRLIETFAPVASYFTVNISSPNTPGLRNLQQAAQLDDLLAKALEARDRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
K P+L+KIAPDLSL E D+ V +VDG+IV+NTT+ R L + + +E
Sbjct: 203 KQKSGDTPVLLKIAPDLSLAELDDVVHVA--RSRRVDGMIVANTTLARPRTLREQTRAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E + +G P++GVGG+ SG A KI+AGASL+Q+Y+S V
Sbjct: 261 QGGLSGRPLFRLSTRMVAETFVRVEGAFPLVGVGGIDSGGAALTKIRAGASLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L + G +S+S+ VGA
Sbjct: 321 YKGLGLVESIKTDLASTLLRTGRDSLSEIVGA 352
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VN+SSPNT LR LQ QL LL +E R+++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNISSPNTPGLRNLQQAAQLDDLLAKALEARDRVKQKSGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDLSL E D+ V
Sbjct: 217 PDLSLAELDDVVHV 230
>gi|19114229|ref|NP_593317.1| dihydroorotate dehydrogenase Ura3 [Schizosaccharomyces pombe 972h-]
gi|417572|sp|P32747.1|PYRD_SCHPO RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOD; Short=DHODase;
Short=DHOdehase; AltName: Full=Dihydroorotate oxidase;
Flags: Precursor
gi|5132|emb|CAA46230.1| dihydroorotate oxidase [Schizosaccharomyces pombe]
gi|2058379|emb|CAB08175.1| dihydroorotate dehydrogenase Ura3 [Schizosaccharomyces pombe]
Length = 443
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 121/184 (65%), Gaps = 4/184 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D V+G+ FG+ A V+NVSSPNT LR LQ K L LL VV RN+L P PP+L
Sbjct: 246 DYVEGVRTFGNFADILVINVSSPNTPGLRNLQKKSALSTLLTAVVSERNKLN-SPHPPVL 304
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA-RYKEETGGLSGEPLR 242
VKIAPDL+ +E DIADV+ KCK+DG+IV NTTV R + L + + EETGGLSG PL+
Sbjct: 305 VKIAPDLNEEELTDIADVL--KKCKIDGVIVGNTTVQRPKTLKSTSHVEETGGLSGPPLK 362
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ + + K +PIIG GG+ SGKDA E +AGA++VQ+YT+ Y GP + +I
Sbjct: 363 PIALNTLRTLRKHLSSDIPIIGCGGISSGKDAIEYARAGATMVQVYTALGYDGPVIAHKI 422
Query: 303 KSEL 306
K E+
Sbjct: 423 KQEI 426
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
++ ++ G+ FG+ A V+NVSSPNT LR LQ K L LL VV RN+L P PP
Sbjct: 244 IEDYVEGVRTFGNFADILVINVSSPNTPGLRNLQKKSALSTLLTAVVSERNKLN-SPHPP 302
Query: 102 ILVKIAPDLSLDEKKDIADVV 122
+LVKIAPDL+ +E DIADV+
Sbjct: 303 VLVKIAPDLNEEELTDIADVL 323
>gi|262277631|ref|ZP_06055424.1| dihydroorotate oxidase [alpha proteobacterium HIMB114]
gi|262224734|gb|EEY75193.1| dihydroorotate oxidase [alpha proteobacterium HIMB114]
Length = 350
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 141/220 (64%), Gaps = 10/220 (4%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I P+ K D D + + KF D A Y +N+SSPNT NLR L K+++ +L
Sbjct: 137 INIGPNKENATKND------DYLTCLEKFYDQADYIAINISSPNTPNLRSLHDKEKIINL 190
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
+ ++ RNQ + + PI+ K++P++ + E +++++ LD + +DGLI++NT+V+ E
Sbjct: 191 IDAILNFRNQ--KEKIKPIIFKLSPNIDISEINNLSEIFLDKQ--IDGLILTNTSVEGKE 246
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
L K E+GGLSG P+ S ++I YK +GK+PIIGVGGV GK A+EKIK GA+
Sbjct: 247 DLLDENKRESGGLSGSPINLVSNKVILNFYKKLRGKIPIIGVGGVNDGKTAYEKIKCGAN 306
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
LVQ+YTS V+ GP + + I EL ELL ++G ++S+AVG
Sbjct: 307 LVQLYTSMVFKGPYVASNINKELVELLNQDGLKNISEAVG 346
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + KF D A Y +N+SSPNT NLR L K+++ +L+ ++ RNQ + + PI+
Sbjct: 152 YLTCLEKFYDQADYIAINISSPNTPNLRSLHDKEKIINLIDAILNFRNQ--KEKIKPIIF 209
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++P++ + E +++++ LD
Sbjct: 210 KLSPNIDISEINNLSEIFLD 229
>gi|330752418|emb|CBL87369.1| Dihydroorotate dehydrogenase, class 2 [uncultured Flavobacteriia
bacterium]
Length = 339
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 5/184 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +K + DV YFVVNVSSPNT LR LQ+K K LL + T +Q + + PIL
Sbjct: 158 DYIKSFNQLFDVVDYFVVNVSSPNTPKLRSLQSKKPFKKLLTAIQSTNDQKSKRK--PIL 215
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY-LDARYKEETGGLSGEPLR 242
VKI+PDLS +E KDI DV+L+ K+DG+I +NTT++R + + GGLSG PL+
Sbjct: 216 VKISPDLSFNEIKDIIDVILE--IKIDGVIATNTTLNRQNLKSENSIINQEGGLSGVPLK 273
Query: 243 NKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+S ++I + K T GKLPIIGVGG+ S +DA EKIK+GA+LVQIYT F+Y GP +V +I
Sbjct: 274 QRSNDVIQYISKYTDGKLPIIGVGGINSAEDAIEKIKSGATLVQIYTGFIYQGPGIVKKI 333
Query: 303 KSEL 306
L
Sbjct: 334 NKAL 337
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT LR LQ+K K LL + T +Q + + PILVKI+PDLS +
Sbjct: 168 DVVDYFVVNVSSPNTPKLRSLQSKKPFKKLLTAIQSTNDQKSKR--KPILVKISPDLSFN 225
Query: 114 EKKDIADVVLD 124
E KDI DV+L+
Sbjct: 226 EIKDIIDVILE 236
>gi|424915640|ref|ZP_18339004.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392851816|gb|EJB04337.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 362
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL +V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSSVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEVAAASGRKVPVFLKIAPDLTEEGMDDIAAEALSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +ETGGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKETGGLSGVPLFEKSTAVLARMRKRVGAALPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKE 313
Y+ VY GP L I L +L+ +E
Sbjct: 316 YSCMVYEGPGLPGDIVRGLSKLMDRE 341
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL +V+ R+++A P+
Sbjct: 153 YVAGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSSVLAARDEVAAASGRKVPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|414164187|ref|ZP_11420434.1| dihydroorotate dehydrogenase [Afipia felis ATCC 53690]
gi|410881967|gb|EKS29807.1| dihydroorotate dehydrogenase [Afipia felis ATCC 53690]
Length = 364
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L KD D D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNLGANKDSEDRTGDYVKLIGLFAPVASYFTVNVSSPNTPGLRNLQQASALDDLLARVID 197
Query: 170 TRNQLAVKP-LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
RN+ + L P+L+KI+PDL+L E D+ V VDG+IVSNTT+ R + L R
Sbjct: 198 ARNRARTEAGLVPLLLKISPDLTLSELDDVVHVA--RARGVDGMIVSNTTLARPDTLRER 255
Query: 229 -YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGASL+Q+
Sbjct: 256 GLALEQGGLSGRPLLRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALMKIRAGASLIQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y+S VY G LV IK++L L++ G S+S+ VGA
Sbjct: 316 YSSLVYKGLGLVEAIKTDLLSTLRRTGRESLSEIVGA 352
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPILVKIAPDL 110
F VA YF VNVSSPNT LR LQ L LL V++ RN+ + L P+L+KI+PDL
Sbjct: 160 FAPVASYFTVNVSSPNTPGLRNLQQASALDDLLARVIDARNRARTEAGLVPLLLKISPDL 219
Query: 111 SLDEKKDIADVV 122
+L E D+ V
Sbjct: 220 TLSELDDVVHVA 231
>gi|85706236|ref|ZP_01037331.1| dihydroorotate dehydrogenase [Roseovarius sp. 217]
gi|85669400|gb|EAQ24266.1| dihydroorotate dehydrogenase [Roseovarius sp. 217]
Length = 352
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 138/215 (64%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D + + G + VNVSSPNT LR LQ + L LLK V+E
Sbjct: 137 LNLGANKDSADRAEDFARVLAHCGAHLDFATVNVSSPNTEKLRDLQGAEALMGLLKGVME 196
Query: 170 TRNQLAVKPLP-PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R+ L P P P+ +KIAPDLS + +IADV S ++G+I +NTT+ R E L +
Sbjct: 197 ARDWL---PQPIPVFLKIAPDLSDVDLSEIADVARASG--LNGIIATNTTLGR-EGLVSA 250
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
K E GGLSG+PL KST +++ + +LT G++P+IGVGG+ S + A+ KI+AGAS VQ+Y
Sbjct: 251 AKGEAGGLSGQPLFEKSTRVLARLSQLTAGEMPLIGVGGIASAEQAYAKIRAGASAVQLY 310
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
++ VY G LV+ I L+ LL ++G+ SV++AVG
Sbjct: 311 SALVYQGMSLVSEIARGLDRLLARDGFGSVAEAVG 345
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
+ VNVSSPNT LR LQ + L LLK V+E R+ L P P P+ +KIAPDLS +
Sbjct: 165 FATVNVSSPNTEKLRDLQGAEALMGLLKGVMEARDWL---PQPIPVFLKIAPDLSDVDLS 221
Query: 117 DIADVVLDS-VKGIL 130
+IADV S + GI+
Sbjct: 222 EIADVARASGLNGII 236
>gi|334314958|ref|YP_004547577.1| dihydroorotate dehydrogenase [Sinorhizobium meliloti AK83]
gi|407719392|ref|YP_006839054.1| dihydroorotate dehydrogenase (quinone) [Sinorhizobium meliloti
Rm41]
gi|418401730|ref|ZP_12975254.1| dihydroorotate dehydrogenase 2 [Sinorhizobium meliloti CCNWSX0020]
gi|334093952|gb|AEG51963.1| dihydroorotate dehydrogenase [Sinorhizobium meliloti AK83]
gi|359504269|gb|EHK76807.1| dihydroorotate dehydrogenase 2 [Sinorhizobium meliloti CCNWSX0020]
gi|407317624|emb|CCM66228.1| Dihydroorotate dehydrogenase (quinone) [Sinorhizobium meliloti
Rm41]
Length = 362
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRIADYVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ A K P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 ARDDEARKGGRQVPVFLKIAPDLTEEGMDDIAAEVLAHG--LDGLIVSNTTLSREGLKDR 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R E GGLSG+PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQANEAGGLSGKPLFEKSTAVLARMRKRVGPHLPIIGVGGVCSAETAAEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L RI L L ++E S+
Sbjct: 316 YSCMVYEGPGLPGRIVRGLSALCEREKLASI 346
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R+ A K P+
Sbjct: 153 YVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALLSAVLAARDDEARKGGRQVPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|384528268|ref|YP_005712356.1| dihydroorotate dehydrogenase [Sinorhizobium meliloti BL225C]
gi|333810444|gb|AEG03113.1| dihydroorotate dehydrogenase [Sinorhizobium meliloti BL225C]
Length = 362
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRIADYVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ A K P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 ARDDEARKGGRQVPVFLKIAPDLTEEGMDDIAAEVLAHG--LDGLIVSNTTLSREGLKDR 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R E GGLSG+PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQANEAGGLSGKPLFEKSTAVLARMRKRVGPHLPIIGVGGVCSAETAAEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ +Y GP L RI L L ++E S+
Sbjct: 316 YSCMIYEGPGLPGRIVRGLSALCEREKLASI 346
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R+ A K P+
Sbjct: 153 YVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALLSAVLAARDDEARKGGRQVPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|209547802|ref|YP_002279719.1| dihydroorotate dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226710776|sp|B5ZPH6.1|PYRD_RHILW RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|209533558|gb|ACI53493.1| Dihydroorotate oxidase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 362
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL +V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSSVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEVAAASGRKVPVFLKIAPDLTEEGMDDIAAEALAHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +ETGGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKETGGLSGVPLFEKSTAVLARMRKRVGAALPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKE 313
Y+ VY GP L I L +L+ +E
Sbjct: 316 YSCMVYEGPGLPGDIVRGLSKLMDRE 341
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL +V+ R+++A P+
Sbjct: 153 YVAGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSSVLAARDEVAAASGRKVPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|15964302|ref|NP_384655.1| dihydroorotate dehydrogenase 2 [Sinorhizobium meliloti 1021]
gi|384534636|ref|YP_005718721.1| Dihydroorotate dehydrogenase [Sinorhizobium meliloti SM11]
gi|433612318|ref|YP_007189116.1| dihydroorotate dehydrogenase, subfamily 2 [Sinorhizobium meliloti
GR4]
gi|81635151|sp|Q92S77.1|PYRD_RHIME RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|15073479|emb|CAC45121.1| Probable dihydroorotate dehydrogenase (dihydroorotate oxidase)
[Sinorhizobium meliloti 1021]
gi|336031528|gb|AEH77460.1| Dihydroorotate dehydrogenase [Sinorhizobium meliloti SM11]
gi|429550508|gb|AGA05517.1| dihydroorotate dehydrogenase, subfamily 2 [Sinorhizobium meliloti
GR4]
Length = 362
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRIADYVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ A K P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 ARDDEARKGGRQVPVFLKIAPDLTEEGMDDIAAEVLAHG--LDGLIVSNTTLSREGLKDR 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R E GGLSG+PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQANEAGGLSGKPLFEKSTAVLARMRKRVGPHLPIIGVGGVCSAETAAEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ +Y GP L RI L L ++E S+
Sbjct: 316 YSCMIYEGPGLPGRIVRGLSALCEREKLASI 346
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R+ A K P+
Sbjct: 153 YVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLSALLSAVLAARDDEARKGGRQVPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|149915953|ref|ZP_01904477.1| dihydroorotate dehydrogenase [Roseobacter sp. AzwK-3b]
gi|149810276|gb|EDM70122.1| dihydroorotate dehydrogenase [Roseobacter sp. AzwK-3b]
Length = 352
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 141/233 (60%), Gaps = 14/233 (6%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P ++ L+L KD AD D + + G + VNVSSPNT LR
Sbjct: 125 RLAMRPRNAVI-----GLNLGANKDSADRAEDFARVLAHCGRHLDFATVNVSSPNTEKLR 179
Query: 153 KLQAKDQLKHLLKTVVETRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVD 210
LQ + L LL V+ R+ L A+ PI +KIAPDLS E +IADV + K +
Sbjct: 180 DLQGAEALAGLLAGVMAARDGLPRAI----PIFLKIAPDLSDAELSEIADVAI--KAGLA 233
Query: 211 GLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFS 270
G+I +NTT+DR E L + E GGLSG PL KST +++ + LT G LP+IGVGGV S
Sbjct: 234 GIIATNTTLDR-EGLHGPHAAEKGGLSGAPLFEKSTRVLARLSVLTGGALPLIGVGGVAS 292
Query: 271 GKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ A+ KI+AGAS VQ+Y+ VY G LV RI LE LL+++G+ +V++AVG
Sbjct: 293 AEAAYAKIRAGASAVQLYSGLVYEGLSLVPRISRGLEALLERDGFANVAEAVG 345
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V+ R+ L PI +KIAPDLS E +
Sbjct: 165 FATVNVSSPNTEKLRDLQGAEALAGLLAGVMAARD--GLPRAIPIFLKIAPDLSDAELSE 222
Query: 118 IADVVLDS-VKGIL 130
IADV + + + GI+
Sbjct: 223 IADVAIKAGLAGII 236
>gi|443325517|ref|ZP_21054209.1| dihydroorotate oxidase A [Xenococcus sp. PCC 7305]
gi|442794884|gb|ELS04279.1| dihydroorotate oxidase A [Xenococcus sp. PCC 7305]
Length = 381
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 142/233 (60%), Gaps = 18/233 (7%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I +L + ++ D D V D A YFV+NVSSPNT LR LQ+ +QL+ +
Sbjct: 154 IPIGINLCKSKIANLEDAAQDYVDSFKLLQDTADYFVINVSSPNTPGLRSLQSGEQLEPI 213
Query: 164 LKTVVE--TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
L + E T+ Q PIL+KIAPDL +E KDI D+ L K ++DG I +NTT+ R
Sbjct: 214 LAALQEANTKKQ-------PILIKIAPDLDWEEIKDILDLAL--KYQLDGAIATNTTIRR 264
Query: 222 -------YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDA 274
+ EE GG+SG+P++ +STE+I +Y+ T GKLPIIGVGG+F+ +DA
Sbjct: 265 DGLKTQILKETGNSITEEAGGISGKPVKERSTEVIGFIYQETGGKLPIIGVGGIFNAQDA 324
Query: 275 FEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
++KI AGASL+Q+YT +VY GP +V + S + + ++ G ++ AVG ++
Sbjct: 325 WDKIVAGASLLQVYTGWVYQGPWMVKDVLSGVLQRVESAGLEHINDAVGLKYR 377
>gi|298290082|ref|YP_003692021.1| dihydroorotate dehydrogenase [Starkeya novella DSM 506]
gi|296926593|gb|ADH87402.1| dihydroorotate dehydrogenase [Starkeya novella DSM 506]
Length = 363
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K+ D D V GI F + YF VNVSSPNT LR LQ + L LL VE
Sbjct: 141 VNVGANKETVDRAADYVAGIEAFAGLGDYFTVNVSSPNTPGLRDLQEETALDDLLARCVE 200
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++ A P P+L+KIAPDL+L + +V + +VDGLIVSNTT+ R L + +
Sbjct: 201 ARDRHA--PGVPLLLKIAPDLALPHLDGVVEVA--HRRRVDGLIVSNTTISRPPGLRSPH 256
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K ETGGLSG PL ST +++E Y G PIIGVGG+ S + AF KI+AGASL+Q+Y+
Sbjct: 257 KGETGGLSGRPLFALSTRMLAETYVRADGAFPIIGVGGIDSAETAFAKIEAGASLIQLYS 316
Query: 290 SFVYHGPPLVTRIKSELEELLQKE 313
VY G LV RIK+ L L KE
Sbjct: 317 GLVYEGLGLVPRIKAGLLARLAKE 340
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI F + YF VNVSSPNT LR LQ + L LL VE R++ A P P+L+
Sbjct: 156 YVAGIEAFAGLGDYFTVNVSSPNTPGLRDLQEETALDDLLARCVEARDRHA--PGVPLLL 213
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+L + +V
Sbjct: 214 KIAPDLALPHLDGVVEVA 231
>gi|384214884|ref|YP_005606048.1| dihydroorotate dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354953781|dbj|BAL06460.1| dihydroorotate dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 365
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 134/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSPDRVGDYVKLIETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--D 226
R ++ K P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L +
Sbjct: 198 ARERVRQKAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARPSTLREE 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
R KE+ GGLSG PL ST +++E Y +G P+IGVGGV SG A KI+AGASL+Q
Sbjct: 256 MRAKEQ-GGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGVDSGGAALTKIRAGASLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G LV IK +L L + G +S+S+ VGA
Sbjct: 315 LYSSLVYKGLGLVDEIKRDLTSTLLRTGRDSLSEIVGA 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V++ R ++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVIDARERVRQKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL + LD V + + V V N + + LR +++AK+Q
Sbjct: 217 PDLSLAQ--------LDDVVQVARSRRVDGMIVSNTTIARPSTLREEMRAKEQ 261
>gi|346992145|ref|ZP_08860217.1| dihydroorotate dehydrogenase 2 [Ruegeria sp. TW15]
Length = 352
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 125/188 (66%), Gaps = 7/188 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
+ VNVSSPNT LR LQ K L LL V+ETRN L P P PI +KIAPDL+ E +
Sbjct: 165 FATVNVSSPNTERLRDLQGKAALTALLSGVIETRNAL---PRPIPIFLKIAPDLTEAELQ 221
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DIADV + VD +I +NTT+ R + L + +K++ GGLSG PL KST +++++ +LT
Sbjct: 222 DIADVA--GETSVDAVIATNTTLSR-DGLRSAHKDQAGGLSGAPLFEKSTRVLAQLSQLT 278
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+P+IGVGG+ S + A+ KI AGAS VQ YT+ VY G L I L++LL ++GY
Sbjct: 279 GADIPLIGVGGISSAEQAYAKICAGASAVQFYTAMVYGGISLAAEIAQGLDDLLARDGYT 338
Query: 317 SVSQAVGA 324
SV+QAVG+
Sbjct: 339 SVAQAVGS 346
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
+ VNVSSPNT LR LQ K L LL V+ETRN L P P PI +KIAPDL+ E +
Sbjct: 165 FATVNVSSPNTERLRDLQGKAALTALLSGVIETRNAL---PRPIPIFLKIAPDLTEAELQ 221
Query: 117 DIADVV 122
DIADV
Sbjct: 222 DIADVA 227
>gi|424879907|ref|ZP_18303539.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392516270|gb|EIW41002.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 362
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQ ++ L LL +V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSSVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+ +KIAPDL+ + +DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAAASGRKIPVFLKIAPDLTEEGMEDIAAEALSHA--LDGLIVSNTTLSRDGLRDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTAVLARMRKRVGSDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L +LL +E S+ +
Sbjct: 316 YSCMVYEGPGLAGDIVRGLSKLLDREKAASIRE 348
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQ ++ L LL +V+ R+++A P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSSVLAARDEMAAASGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + +DIA
Sbjct: 213 FLKIAPDLTEEGMEDIA 229
>gi|402490441|ref|ZP_10837230.1| dihydroorotate dehydrogenase 2 [Rhizobium sp. CCGE 510]
gi|401810467|gb|EJT02840.1| dihydroorotate dehydrogenase 2 [Rhizobium sp. CCGE 510]
Length = 362
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQ ++ L LL +V+
Sbjct: 138 VNIGANKDSDDRIADYVAGIRRFHSVARYFTANISSPNTPGLRDLQGRESLAALLSSVLT 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEAAATSGRKVPVFLKIAPDLTEEGMDDIAAEAL--AHALDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +ETGGLSG PL KST +++ M K LPIIGVGG+ S + A EKI+AGA LVQ+
Sbjct: 256 RQAQETGGLSGVPLFEKSTAVLARMRKRVGPALPIIGVGGISSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L +L+ +E S+ +
Sbjct: 316 YSCMVYEGPGLAGDIVRGLSKLMDREKAGSIGE 348
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQ ++ L LL +V+ R++ A P+
Sbjct: 153 YVAGIRRFHSVARYFTANISSPNTPGLRDLQGRESLAALLSSVLTARDEAAATSGRKVPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|254420435|ref|ZP_05034159.1| dihydroorotate oxidase [Brevundimonas sp. BAL3]
gi|196186612|gb|EDX81588.1| dihydroorotate oxidase [Brevundimonas sp. BAL3]
Length = 349
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 133/216 (61%), Gaps = 3/216 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L KD D D V G+ + A YF VN+SSPNT LR LQ ++QL LL +
Sbjct: 137 NLGANKDTEDKAADYVAGLQRLAGRASYFTVNISSPNTPGLRALQGREQLDDLLGRIDAA 196
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R +P + +KIAPDL DE I + L ++DGLIVSNTT++R E L +
Sbjct: 197 RPADPAARVP-VFLKIAPDLIADEIGMIVEASL--AHRIDGLIVSNTTLERPETLRSPDA 253
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
ETGGLSG P+R + + + + +G+LP+I VGG+ SG +A+ +I+ GAS VQ+Y++
Sbjct: 254 HETGGLSGAPIRPFAEKALRAAAEAAQGRLPLIAVGGIDSGAEAYARIRLGASAVQVYSA 313
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+Y GP L+TRIK +L L+ +G++S+S A+GA+
Sbjct: 314 LIYDGPGLITRIKRDLAARLRADGFSSISAAIGASR 349
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ + A YF VN+SSPNT LR LQ ++QL LL + R + P+ +
Sbjct: 151 YVAGLQRLAGRASYFTVNISSPNTPGLRALQGREQLDDLLGRIDAARPADPAARV-PVFL 209
Query: 105 KIAPDLSLDEKKDIADVVL 123
KIAPDL DE I + L
Sbjct: 210 KIAPDLIADEIGMIVEASL 228
>gi|403381217|ref|ZP_10923274.1| dihydroorotate dehydrogenase 2 [Paenibacillus sp. JC66]
Length = 364
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 135/195 (69%), Gaps = 8/195 (4%)
Query: 132 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR--NQLAVKPLPPILVKIAPD 189
+GD +FVVN+SSPNT +LR LQ D+LK LL V++ R ++ + P+LVKIAPD
Sbjct: 173 YGD---FFVVNISSPNTPDLRNLQHGDELKRLLAAVMDEREIQSRKLQAVKPVLVKIAPD 229
Query: 190 LSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELI 249
+S E + I D +L S V G+I +NTTV R E L E GGLSG PL KS+E+I
Sbjct: 230 ISGSELEYIMDTILASG--VSGVIATNTTVSR-EGLRGAAAAEAGGLSGRPLSGKSSEVI 286
Query: 250 SEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
+Y+L++GKLPIIG GG+FS +DA++KI+AGASLV+IYT+ +Y GP L+ I L EL
Sbjct: 287 RSVYRLSQGKLPIIGCGGIFSAQDAYDKIRAGASLVEIYTALIYEGPELIKEINEGLLEL 346
Query: 310 LQKEGYNSVSQAVGA 324
L+K+G+ +S AVGA
Sbjct: 347 LRKDGFKRLSDAVGA 361
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR--NQLALKPLPPILVKIAPD 109
+GD +FVVN+SSPNT +LR LQ D+LK LL V++ R L+ + P+LVKIAPD
Sbjct: 173 YGD---FFVVNISSPNTPDLRNLQHGDELKRLLAAVMDEREIQSRKLQAVKPVLVKIAPD 229
Query: 110 LSLDEKKDIADVVLDS-VKGIL 130
+S E + I D +L S V G++
Sbjct: 230 ISGSELEYIMDTILASGVSGVI 251
>gi|395786908|ref|ZP_10466635.1| dihydroorotate oxidase [Bartonella tamiae Th239]
gi|423718173|ref|ZP_17692363.1| dihydroorotate oxidase [Bartonella tamiae Th307]
gi|395423206|gb|EJF89402.1| dihydroorotate oxidase [Bartonella tamiae Th239]
gi|395426606|gb|EJF92733.1| dihydroorotate oxidase [Bartonella tamiae Th307]
Length = 362
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D V GI KF DVA YF VN+SSPNT LR LQA+D LK LL +
Sbjct: 136 VNIGANKDSHDRVADYVCGIHKFYDVADYFTVNISSPNTPGLRDLQARDSLKELLTAIST 195
Query: 170 TR--NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + + PI +KIAPDL+ DIA +L S DG+IVSNTT+ R +
Sbjct: 196 ARLLEKEKFRKQIPIFLKIAPDLTQQALDDIAQELLSSD--FDGVIVSNTTLSRKGLKNQ 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
ETGGLSG+PL +ST ++++M K+ +PIIGVGGV A EKIKAGA LVQ+
Sbjct: 254 NLAHETGGLSGKPLFERSTIILAKMRKILGKTMPIIGVGGVHDADTALEKIKAGADLVQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
Y++ VY GP L + I +E+ ++++G ++
Sbjct: 314 YSAMVYQGPLLASMILKSIEQKMKEDGVKRIA 345
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR--NQLALKPLPPI 102
++ GI KF DVA YF VN+SSPNT LR LQA+D LK LL + R + + PI
Sbjct: 151 YVCGIHKFYDVADYFTVNISSPNTPGLRDLQARDSLKELLTAISTARLLEKEKFRKQIPI 210
Query: 103 LVKIAPDLSLDEKKDIADVVLDS 125
+KIAPDL+ DIA +L S
Sbjct: 211 FLKIAPDLTQQALDDIAQELLSS 233
>gi|319406715|emb|CBI80348.1| Dihydroorotate dehydrogenase [Bartonella sp. 1-1C]
Length = 362
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D V GI F DVA YF +NVSSPNT LR LQ +D L+ L++ + +
Sbjct: 136 VNIGANKDTVNRIDDYVSGIACFYDVADYFALNVSSPNTPGLRNLQIRDSLRFLIQEISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
+R++ K PI +KIAPDL+ E D+A + S DGLIVSNTT+ R D+
Sbjct: 196 SRSKQKEKHGFSIPIFLKIAPDLTEKELDDVAQEI--SASDFDGLIVSNTTLSRRGLTDS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R+ +E GGLSG PL +ST ++++M K + IIGVGGV + A EK+KAGA LVQI
Sbjct: 254 RWIDEKGGLSGRPLFERSTIVLAKMRKKLGKDIAIIGVGGVSDAQTALEKVKAGADLVQI 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
Y+ +Y GP + I E+ +L+Q+EG ++++
Sbjct: 314 YSGMIYEGPNIAVTIMKEILKLMQQEGVDNIT 345
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F DVA YF +NVSSPNT LR LQ +D L+ L++ + ++R++ K PI
Sbjct: 151 YVSGIACFYDVADYFALNVSSPNTPGLRNLQIRDSLRFLIQEISQSRSKQKEKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ E D+A
Sbjct: 211 FLKIAPDLTEKELDDVA 227
>gi|307155145|ref|YP_003890529.1| dihydroorotate dehydrogenase [Cyanothece sp. PCC 7822]
gi|306985373|gb|ADN17254.1| dihydroorotate dehydrogenase [Cyanothece sp. PCC 7822]
Length = 407
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 167/297 (56%), Gaps = 30/297 (10%)
Query: 47 LGILKFGDVAHYFVVNVSSP-------NTANLRKLQAKDQ-LKHLLKTVVETRNQLALKP 98
G+ + G V H+ P + A L ++ A +Q K + KT+ ET +
Sbjct: 118 FGLAELGAVTHHPQPGNPRPRLFRLPQDRAGLNRMGANNQGAKVMAKTLQETWARH---- 173
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
P + I +L + + LD V+ D A YFVVNVSSPNT LR LQA +
Sbjct: 174 --PRTIPIGINLCKSKITPLDAAALDYVESFRYLKDWADYFVVNVSSPNTPGLRDLQATE 231
Query: 159 QLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKC-KVDGLIVSNT 217
QL+ ++ + Q PILVKI+PDL+ D+AD+V +K ++ G+I +NT
Sbjct: 232 QLEPIIAAL-----QAENGGTKPILVKISPDLNWS---DLADLVQLAKTYQLAGIIATNT 283
Query: 218 TVDR----YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFS 270
T+ R + L A K EE GG+SG PL+ +STE+I +++ T G+LPIIGVGG+F+
Sbjct: 284 TISREGLKTQILKATGKDIREEAGGISGMPLQKRSTEIIRFIWQQTGGQLPIIGVGGIFT 343
Query: 271 GKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
DA+EKI AGASL+Q+YT ++Y GP +V I L L++ G +S+S+AVG +K
Sbjct: 344 PLDAWEKIAAGASLLQVYTGWIYEGPWMVPNILQGLVAKLEEHGLSSLSEAVGCENK 400
>gi|296448473|ref|ZP_06890355.1| dihydroorotate dehydrogenase [Methylosinus trichosporium OB3b]
gi|296254025|gb|EFH01170.1| dihydroorotate dehydrogenase [Methylosinus trichosporium OB3b]
Length = 356
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K+ AD V D V GI F DVA YF VNVSSPNT LR LQ K L LL +V+
Sbjct: 138 VNIGANKETADRVGDYVAGIEAFADVASYFCVNVSSPNTPGLRDLQEKSALDELLSSVLA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + P P+L+KIAPDLSL DI V D VDGL+VSNTT+ R + L +
Sbjct: 198 ARER--AHPRRPVLLKIAPDLSLSALDDIVLVARDRG--VDGLVVSNTTLARPQTLVSPL 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E+GGLSG PL + ST +++ + + + PIIGVGG+ S + A KI+AGASLVQ+Y+
Sbjct: 254 AKESGGLSGAPLFDLSTRMLAAAFVRVEDQFPIIGVGGIDSLETALAKIEAGASLVQLYS 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEG 314
VY GP LV + L L++EG
Sbjct: 314 GLVYAGPGLVGDVARGLVATLEREG 338
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI F DVA YF VNVSSPNT LR LQ K L LL +V+ R + P P+L+
Sbjct: 153 YVAGIEAFADVASYFCVNVSSPNTPGLRDLQEKSALDELLSSVLAARER--AHPRRPVLL 210
Query: 105 KIAPDLSLDEKKDIADVVLD 124
KIAPDLSL DI V D
Sbjct: 211 KIAPDLSLSALDDIVLVARD 230
>gi|159900872|ref|YP_001547119.1| dihydroorotate dehydrogenase [Herpetosiphon aurantiacus DSM 785]
gi|159893911|gb|ABX06991.1| dihydroorotate dehydrogenase [Herpetosiphon aurantiacus DSM 785]
Length = 356
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +GI G+ A Y V+N+SSPNT LR+L ++ L LL+ V R QL + P+
Sbjct: 159 DYRQGINLLGEYADYIVINISSPNTPGLRELSRREPLTELLQVVKTARQQL--RHQAPLF 216
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
VK++PD D + A + VDG+I +NTTV R E L + + ETGGLSG PL+
Sbjct: 217 VKLSPDE--DREGLEAALGAALDAGVDGIIATNTTVSR-ENLRSAQQTETGGLSGAPLKT 273
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
K+ + +Y+ T GKLP+IGVGG+ +G+DA+E+I AGAS VQ+YTS +Y GP LV I
Sbjct: 274 KALATLKYIYQTTNGKLPLIGVGGIANGQDAYERILAGASAVQLYTSLIYAGPQLVGTIN 333
Query: 304 SELEELLQKEGYNSVSQAVGAA 325
EL LL+++G++S+ AVG+A
Sbjct: 334 RELAALLRRDGFDSIQTAVGSA 355
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
GI G+ A Y V+N+SSPNT LR+L ++ L LL+ V R Q L+ P+ VK++
Sbjct: 163 GINLLGEYADYIVINISSPNTPGLRELSRREPLTELLQVVKTARQQ--LRHQAPLFVKLS 220
Query: 108 PD 109
PD
Sbjct: 221 PD 222
>gi|444321194|ref|XP_004181253.1| hypothetical protein TBLA_0F01920 [Tetrapisispora blattae CBS 6284]
gi|387514297|emb|CCH61734.1| hypothetical protein TBLA_0F01920 [Tetrapisispora blattae CBS 6284]
Length = 451
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 14/212 (6%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D +KGI KF +A V+NVSSPNT LR LQ +++L +LL +V RN L
Sbjct: 230 KNKNGDEVQDYLKGIEKFQSLADVLVINVSSPNTPGLRDLQQEEKLTNLLSQIVAKRNDL 289
Query: 175 --------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL- 225
A+ PPILVKIAPDLS++E K I + S +DG+I+SNTT+ R + L
Sbjct: 290 ISTGNALGAISHNPPILVKIAPDLSVNELKSIVESAKTSN--IDGIIISNTTIQRPKTLT 347
Query: 226 --DARYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGA 282
D E GGLSG+PL+ S + + K +K KL ++G GG+ SGKDA E KAGA
Sbjct: 348 TEDEILINENGGLSGKPLKPLSLAALRTVSKYSKDSKLVLVGCGGISSGKDAIEFAKAGA 407
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
S V++YTSF Y GP L+ RIK E++E L+KEG
Sbjct: 408 SFVELYTSFAYRGPGLIARIKDEIKEELEKEG 439
>gi|334136027|ref|ZP_08509506.1| dihydroorotate oxidase [Paenibacillus sp. HGF7]
gi|333606640|gb|EGL17975.1| dihydroorotate oxidase [Paenibacillus sp. HGF7]
Length = 369
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 131/195 (67%), Gaps = 5/195 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL--PPILVKIAPDLSLD 193
A +F++N+SSPNT +LRKLQ +L LL + +L + P+ VKIAPD+
Sbjct: 174 ADFFIINISSPNTPDLRKLQHGSELDELLIRITAEAERLNARHRRDKPVFVKIAPDMGGG 233
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +++ ++ K + G+I +NTTV R + ++E+TGGLSG+PL +STE+I +Y
Sbjct: 234 ELENMIGKIM--KHGIPGVIAANTTVTRSGLIHP-HREQTGGLSGKPLHRRSTEIIRSIY 290
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
K + G L IIG GG+F+ +D +EKI+AGASLV+IYTSF+Y GP + SEL +LL+++
Sbjct: 291 KQSGGTLKIIGSGGIFTARDVYEKIRAGASLVEIYTSFIYKGPGINRACSSELLDLLKRD 350
Query: 314 GYNSVSQAVGAAHKS 328
G+ S+S+AVGA H +
Sbjct: 351 GFASLSEAVGADHAA 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDLSLD 113
A +F++N+SSPNT +LRKLQ +L LL + +L + P+ VKIAPD+
Sbjct: 174 ADFFIINISSPNTPDLRKLQHGSELDELLIRITAEAERLNARHRRDKPVFVKIAPDMGGG 233
Query: 114 EKKD-IADVVLDSVKGIL 130
E ++ I ++ + G++
Sbjct: 234 ELENMIGKIMKHGIPGVI 251
>gi|192289293|ref|YP_001989898.1| dihydroorotate dehydrogenase 2 [Rhodopseudomonas palustris TIE-1]
gi|226710777|sp|B3QEE3.1|PYRD_RHOPT RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|192283042|gb|ACE99422.1| Dihydroorotate oxidase [Rhodopseudomonas palustris TIE-1]
Length = 364
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 133/217 (61%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D VK I F +A YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSDDRVADYVKLIETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVID 197
Query: 170 TRNQL-AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R ++ A P+L+KIAPDLSL E D+ + +VDG+IV+NTT+ R L R
Sbjct: 198 ARERVRAAAGDTPVLLKIAPDLSLGELDDVVHIA--RSRRVDGMIVANTTLSRSPTLRER 255
Query: 229 YK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K E GGLSG PL ST +++E + +G P+IGVGG+ SG A KI+AGA+LVQ+
Sbjct: 256 TKMNEQGGLSGRPLFRLSTRMVAETFVRAEGAFPLIGVGGIDSGGAALTKIRAGATLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y++ VY G LV IK++L L + G +S+++ VGA
Sbjct: 316 YSALVYKGLGLVESIKADLASTLLRTGRDSLAEIVGA 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKPLPPILVKIA 107
I F +A YF VNVSSPNT LR LQ L LL V++ R ++ A P+L+KIA
Sbjct: 157 IETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIDARERVRAAAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDLSL E D+ +
Sbjct: 217 PDLSLGELDDVVHI 230
>gi|13474728|ref|NP_106297.1| dihydroorotate dehydrogenase 2 [Mesorhizobium loti MAFF303099]
gi|81855351|sp|Q98B89.1|PYRD_RHILO RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|14025483|dbj|BAB52083.1| dihydroorotate dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 359
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D +G+ +F A Y VN+SSPNT LR +QA++QL LL V+
Sbjct: 138 VNIGANKDSADRIGDYERGVGRFARHASYLTVNISSPNTPGLRNMQAREQLGELLSRVMA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R A +P PI +KIAPDL E +DIA V++ + +DG+IVSNTT+ R
Sbjct: 198 ARASAATQP--PIFLKIAPDLVEAELEDIAAEVVEKR--IDGIIVSNTTISRPPLRSGDV 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG+PL +ST ++++M KL + IIGVGGV S + A EKI+AGA LVQ+YT
Sbjct: 254 GRETGGLSGKPLFERSTIVLAKMRKLLGPGIAIIGVGGVDSAETALEKIRAGADLVQLYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
+Y GP L RI + + + E S+ +
Sbjct: 314 GMIYAGPALPGRIVAGMARFCETERLKSIGE 344
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ +F A Y VN+SSPNT LR +QA++QL LL V+ R A + PPI +KIA
Sbjct: 156 GVGRFARHASYLTVNISSPNTPGLRNMQAREQLGELLSRVMAARASAATQ--PPIFLKIA 213
Query: 108 PDLSLDEKKDI-ADVVLDSVKGIL 130
PDL E +DI A+VV + GI+
Sbjct: 214 PDLVEAELEDIAAEVVEKRIDGII 237
>gi|389879185|ref|YP_006372750.1| Dihydroorotate dehydrogenase [Tistrella mobilis KA081020-065]
gi|388529969|gb|AFK55166.1| Dihydroorotate dehydrogenase [Tistrella mobilis KA081020-065]
Length = 360
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 128/216 (59%), Gaps = 3/216 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L + K D + D G+ K G + VVNVSSPNT LR LQ + L LL +
Sbjct: 146 NLGKNKTSEDALADYTAGLAKLGPLVDAVVVNVSSPNTPGLRDLQGRAHLSGLLGGLKAA 205
Query: 171 RNQ-LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+Q +A K PPILVKIAPDL D D D +DG++V+NTT+ R + L + +
Sbjct: 206 RDQGIAGKARPPILVKIAPDLDEAGLADTVDAARD--AGIDGMVVANTTIARPDTLQSPH 263
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ +TGGLSG PL+ ++ L E+++ G +PIIGVGG+ + DA++++ AGA L+Q+Y+
Sbjct: 264 RGQTGGLSGRPLKARALALTREVFRALDGTMPIIGVGGIETADDAWDRLAAGADLLQLYS 323
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+ VY GP LV RI L + EG V + VG A
Sbjct: 324 ALVYEGPGLVGRIVEGLNRRIAAEGVRDVGEIVGRA 359
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ-LALKPL 99
L + G+ K G + VVNVSSPNT LR LQ + L LL + R+Q +A K
Sbjct: 156 ALADYTAGLAKLGPLVDAVVVNVSSPNTPGLRDLQGRAHLSGLLGGLKAARDQGIAGKAR 215
Query: 100 PPILVKIAPDLSLDEKKDIADVVLDS 125
PPILVKIAPDL D D D+
Sbjct: 216 PPILVKIAPDLDEAGLADTVDAARDA 241
>gi|386399927|ref|ZP_10084705.1| dihydroorotate dehydrogenase, subfamily 2 [Bradyrhizobium sp.
WSM1253]
gi|385740553|gb|EIG60749.1| dihydroorotate dehydrogenase, subfamily 2 [Bradyrhizobium sp.
WSM1253]
Length = 365
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 134/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSPDRVNDYVKLIETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--D 226
R ++ K P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L +
Sbjct: 198 ARERVRQKAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARPSTLREE 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
R KE+ GGLSG PL ST +++E Y +G P+IGVGGV SG A KI+AGASL+Q
Sbjct: 256 MRAKEQ-GGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGVDSGGAALTKIRAGASLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G LV IK +L L + G +S+S+ VG+
Sbjct: 315 LYSSLVYKGLGLVDEIKRDLASTLLRTGRDSLSEIVGS 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V++ R ++ K P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVIDARERVRQKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL + LD V + + V V N + + LR +++AK+Q
Sbjct: 217 PDLSLAQ--------LDDVVQVARSRRVDGMIVSNTTIARPSTLREEMRAKEQ 261
>gi|395766548|ref|ZP_10447088.1| dihydroorotate dehydrogenase [Bartonella doshiae NCTC 12862]
gi|395415882|gb|EJF82306.1| dihydroorotate dehydrogenase [Bartonella doshiae NCTC 12862]
Length = 362
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 136/226 (60%), Gaps = 10/226 (4%)
Query: 95 ALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKL 154
A KPL + V I + KD + + D + GI F DVA YF VN+SSPNT LR L
Sbjct: 127 ACKPLGIVGVNIGAN------KDTVNKIDDYIAGIACFYDVADYFTVNISSPNTPGLRDL 180
Query: 155 QAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
QA+D L L+ + + RN+ K P+ +KIAPDLS E D+A+ V S DGL
Sbjct: 181 QARDSLHLLINALSQARNEQKKKHGFSIPLFLKIAPDLSEKELDDVAEEVKHSD--FDGL 238
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I+SNTT+ R D +E GGLSG PL +ST ++++M + ++ IIGVGGV G+
Sbjct: 239 IISNTTLSRQGLTDRVLCDEKGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVNDGQ 298
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
A EK+KAGA L+Q+Y+ VY GP L I E+ +L+QKEG +++
Sbjct: 299 TALEKVKAGADLIQLYSGMVYEGPDLAITILREILQLMQKEGVDTI 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F DVA YF VN+SSPNT LR LQA+D L L+ + + RN+ K P+
Sbjct: 151 YIAGIACFYDVADYFTVNISSPNTPGLRDLQARDSLHLLINALSQARNEQKKKHGFSIPL 210
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDLS E D+A+ V
Sbjct: 211 FLKIAPDLSEKELDDVAEEV 230
>gi|218439322|ref|YP_002377651.1| dihydroorotate dehydrogenase 2 [Cyanothece sp. PCC 7424]
gi|254788883|sp|B7KIU7.1|PYRD_CYAP7 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|218172050|gb|ACK70783.1| dihydroorotate dehydrogenase [Cyanothece sp. PCC 7424]
Length = 377
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 166/292 (56%), Gaps = 28/292 (9%)
Query: 47 LGILKFGDVAHYFVVNVSSP-------NTANLRKLQAKDQLKHLL-KTVVETRNQLALKP 98
G+ + G V H+ P + A L ++ A +Q +L KT+ ET ++
Sbjct: 95 FGLAELGAVTHHPQPGNPRPRLFRLPLDKAGLNRMGANNQGATILAKTLQETWDRH---- 150
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
P + I +L + + + D V+ D A YFVVNVSSPNT LR LQA
Sbjct: 151 --PRTIPIGINLCKSKITPLEEAASDYVESFRALKDWADYFVVNVSSPNTPGLRDLQATA 208
Query: 159 QLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
QL+ +L + N L P+L+KI+PDL + KDI V L ++ G+I +NTT
Sbjct: 209 QLEPIL-AALHRENALNQ----PLLLKISPDLDWGDLKDI--VNLAKTYELAGIIATNTT 261
Query: 219 VDRY----EYLDARYK---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
+ R + L A K EE GG+SG+PL+ +STE+I +Y+ T+G++PIIGVGG+F+
Sbjct: 262 ISRQGLKTQTLPATGKDIREEAGGISGKPLQQRSTEIIRFIYQQTQGQIPIIGVGGIFTL 321
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+DA+EKI AGASL+Q+YT ++Y GP +V I L L+++G + +SQAVG
Sbjct: 322 EDAWEKITAGASLLQVYTGWIYEGPWMVRNILQGLVAKLEQQGLSHLSQAVG 373
>gi|239831163|ref|ZP_04679492.1| dihydroorotate oxidase [Ochrobactrum intermedium LMG 3301]
gi|444309486|ref|ZP_21145123.1| dihydroorotate dehydrogenase 2 [Ochrobactrum intermedium M86]
gi|239823430|gb|EEQ94998.1| dihydroorotate oxidase [Ochrobactrum intermedium LMG 3301]
gi|443487153|gb|ELT49918.1| dihydroorotate dehydrogenase 2 [Ochrobactrum intermedium M86]
Length = 364
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA+D L+ LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQARDSLRELLSRVLE 197
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ P+ +KIAPDL+ +E DIA ++ K+DG+I+SNTT+ R A
Sbjct: 198 ARNEEGKMCTLKRPVFLKIAPDLADEELDDIAAEA--TEQKLDGIIISNTTLSRAGLKSA 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
++ETGGLSG PL +ST ++++M + +P+IGVGGV S + A KIKAGA LVQ+
Sbjct: 256 DNRDETGGLSGVPLFERSTIILAKMRERVGPDMPLIGVGGVDSAETALTKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
YT +Y GP L I L +++EG +++
Sbjct: 316 YTGLIYRGPNLPAEIVRGLSAAVKREGVANIA 347
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA+D L+ LL V+E RN+ LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQARDSLRELLSRVLEARNEEGKMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLADEELDDIA 229
>gi|254414939|ref|ZP_05028703.1| dihydroorotate oxidase [Coleofasciculus chthonoplastes PCC 7420]
gi|196178428|gb|EDX73428.1| dihydroorotate oxidase [Coleofasciculus chthonoplastes PCC 7420]
Length = 381
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 157/253 (62%), Gaps = 20/253 (7%)
Query: 85 KTVVETRNQLALKPLPPILVKIAPDLS-LDEKKDIADVVLDSVKGILKFGDVAHYFVVNV 143
K + + +A +P PI V I S + +D A L S + + +GD YFVVNV
Sbjct: 138 KALADRLGAIAHQPFEPIPVGINLGKSKVTPLEDAATDYLTSFRLLKPWGD---YFVVNV 194
Query: 144 SSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVL 203
SSPNT LR LQ +QL+ +L+T+ + NQ KPL LVKIAPDL E + IADVV+
Sbjct: 195 SSPNTPGLRSLQDAEQLRIILETL-QQDNQ-GQKPL---LVKIAPDL---EWEAIADVVM 246
Query: 204 DSKC-KVDGLIVSNTTVDR----YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKL 255
++ ++ G++ +NTT+ R + + K EE GG+SG PLR +STE+I +++
Sbjct: 247 LAQTYQLAGIVATNTTIRRDILKTQVITTTGKPVTEEAGGISGAPLRERSTEVIRFIHQQ 306
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T+GKLPIIGVGG+F+ +DA+EK+ AGASL+Q+YT VY GP + RI L L+++G
Sbjct: 307 TQGKLPIIGVGGIFTAEDAWEKLTAGASLIQVYTGLVYSGPWMARRIMQGLLRKLEQQGL 366
Query: 316 NSVSQAVGAAHKS 328
+S++Q V A S
Sbjct: 367 SSITQVVKQAQAS 379
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 23/95 (24%)
Query: 29 NMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 88
+ L+SF ++ W GD YFVVNVSSPNT LR LQ +QL+ +L+T +
Sbjct: 175 DYLTSFRLLKPW------------GD---YFVVNVSSPNTPGLRSLQDAEQLRIILET-L 218
Query: 89 ETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVL 123
+ NQ KPL LVKIAPDL E + IADVV+
Sbjct: 219 QQDNQ-GQKPL---LVKIAPDL---EWEAIADVVM 246
>gi|190345671|gb|EDK37597.2| hypothetical protein PGUG_01695 [Meyerozyma guilliermondii ATCC
6260]
Length = 412
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 133/208 (63%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ RN +
Sbjct: 196 KNKFGDEVEDYVKGVSRLGPYADVLVVNVSSPNTPGLRDLQSEGKLTNLLSTVVQERNAV 255
Query: 175 A---VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY----LDA 227
V +P +LVK+APDL+ E + IA+ + + KVDG+I+SNTT+ R D+
Sbjct: 256 GKNMVGKVPSVLVKVAPDLTEPEIESIANSAI--QAKVDGIIISNTTIQRPTQSLLTTDS 313
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+TGGLSG+PL+ S + + ++K TK L ++G GGV SGKD E KAGAS+VQ
Sbjct: 314 NLINQTGGLSGKPLKPLSLKALRTLHKYTKDSNLVLVGCGGVSSGKDVLEFGKAGASIVQ 373
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP L ++IK EL E LQKEG
Sbjct: 374 LYTAFAYRGPGLPSKIKDELVEELQKEG 401
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---LKPLPP 101
++ G+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ RN + + +P
Sbjct: 206 YVKGVSRLGPYADVLVVNVSSPNTPGLRDLQSEGKLTNLLSTVVQERNAVGKNMVGKVPS 265
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+LVK+APDL+ E + IA+ + + V GI+
Sbjct: 266 VLVKVAPDLTEPEIESIANSAIQAKVDGII 295
>gi|254424616|ref|ZP_05038334.1| dihydroorotate oxidase [Synechococcus sp. PCC 7335]
gi|196192105|gb|EDX87069.1| dihydroorotate oxidase [Synechococcus sp. PCC 7335]
Length = 384
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 124/200 (62%), Gaps = 20/200 (10%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLAVKPLPPILVKIAPDLSLDEK 195
YFVVNVSSPNT LR LQA +QL +L+T+ T N+ P+LVKI+PDL+ +
Sbjct: 194 YFVVNVSSPNTPGLRSLQATEQLAPILETLQNANTENK-------PLLVKISPDLATE-- 244
Query: 196 KDIADVV-LDSKCKVDGLIVSNTTVDRYEY-------LDARYKEETGGLSGEPLRNKSTE 247
DI D+V L C + G+I +NTTVDR + +E GG+SG P++ +STE
Sbjct: 245 -DIVDIVQLAQDCNLAGIIATNTTVDRSALTTRTITTIGKSVTDEAGGISGAPVQQRSTE 303
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+I ++Y TKG LPIIGVGG+F+ DA+ KI AGASL+Q YT +VY GP ++ I S L
Sbjct: 304 VIRQIYAQTKGTLPIIGVGGIFNADDAWAKITAGASLLQTYTGWVYEGPTMIKNITSGLV 363
Query: 308 ELLQKEGYNSVSQAVGAAHK 327
E L +S A+G H+
Sbjct: 364 ERLHNNNLEHISNAIGLDHR 383
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLALKPLPPILVKIAPDLSLDEK 115
YFVVNVSSPNT LR LQA +QL +L+T+ T N+ P+LVKI+PDL+ ++
Sbjct: 194 YFVVNVSSPNTPGLRSLQATEQLAPILETLQNANTENK-------PLLVKISPDLATEDI 246
Query: 116 KDIADVVLD-SVKGIL 130
DI + D ++ GI+
Sbjct: 247 VDIVQLAQDCNLAGII 262
>gi|299134041|ref|ZP_07027234.1| dihydroorotate dehydrogenase [Afipia sp. 1NLS2]
gi|298590788|gb|EFI50990.1| dihydroorotate dehydrogenase [Afipia sp. 1NLS2]
Length = 364
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K+ D D VK I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNLGANKESEDRTGDYVKLIGMFAPVASYFTVNVSSPNTPGLRNLQQASALDDLLARVID 197
Query: 170 TRNQLAVKPLP-PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
RN+ + P+L+KI+PDL+L E D+ + VDG+IVSNTT+ R + L R
Sbjct: 198 ARNRARTEAGAVPLLLKISPDLTLSELDDVVHIA--RARGVDGMIVSNTTLARPDTLRER 255
Query: 229 -YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST +++E Y T+G P+IGVGG+ SG A KI+AGASL+Q+
Sbjct: 256 GLALEQGGLSGRPLLRLSTRMVAETYVRTEGAFPLIGVGGIDSGGAALMKIRAGASLIQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y+S VY G LV IK++L L++ G S+S+ VGA
Sbjct: 316 YSSLVYKGLGLVEAIKTDLLSTLRRTGRESLSEIVGA 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDL 110
F VA YF VNVSSPNT LR LQ L LL V++ RN+ + P+L+KI+PDL
Sbjct: 160 FAPVASYFTVNVSSPNTPGLRNLQQASALDDLLARVIDARNRARTEAGAVPLLLKISPDL 219
Query: 111 SLDEKKDIADVV 122
+L E D+ +
Sbjct: 220 TLSELDDVVHIA 231
>gi|448510280|ref|XP_003866320.1| Ura1 dihydroorotate dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380350658|emb|CCG20880.1| Ura1 dihydroorotate dehydrogenase [Candida orthopsilosis Co 90-125]
Length = 439
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 130/208 (62%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ + +L +LL TVV+ R+ L
Sbjct: 223 KNKTGDEVEDYVKGVSRLGPFADVLVVNVSSPNTPGLRDLQNESKLTNLLTTVVKERDIL 282
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV----DRYEYLDA 227
L PPILVK+APDL+ E IA+ + KVDG+I+SNTT+ DR D
Sbjct: 283 RTNLLGAKPPILVKVAPDLTEPEIMSIANSA--KEAKVDGIIISNTTIQRPKDRMLTTDE 340
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGK-LPIIGVGGVFSGKDAFEKIKAGASLVQ 286
ETGGLSG+PL+ S + + + K TKG L ++G GG+ SGKDA E KAGA+ V+
Sbjct: 341 TLINETGGLSGKPLKPLSLQALKLLNKHTKGSGLVLVGCGGISSGKDALEFAKAGATFVE 400
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP LV RI+ EL E L+KEG
Sbjct: 401 LYTAFAYKGPGLVARIRDELAEELRKEG 428
>gi|384086575|ref|ZP_09997750.1| dihydroorotate dehydrogenase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 368
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 140/241 (58%), Gaps = 20/241 (8%)
Query: 96 LKPLP-PILVKIAPDLSLDEKKDIADVVLDSVKGI---LKFGDVAHYFVVNVSSPNTANL 151
L+ LP P V I +L ++ + D V + +GD Y VNVSSPNT L
Sbjct: 132 LRALPHPHCVPIGINLGKNKDTPLEHAAEDYVFALEVLFPYGD---YLTVNVSSPNTPGL 188
Query: 152 RKLQAKDQLKHLLKTVVETRNQLAV---KPLPPILVKIAPDLSLDEKKDIADVVLDSKCK 208
R LQ D L LL V +LA +P P+LVKIAPDL ++ IA + +
Sbjct: 189 RLLQGADALPELLAAVAAANQRLAAEYQRPALPLLVKIAPDLDPEDISAIAQLAKGDQPL 248
Query: 209 VDGLIVSNTTVDRY----EYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIG 264
VDG I +NTT+DR EY+ A GGLSG PLR+++ +I+++Y+ GK+PIIG
Sbjct: 249 VDGFIATNTTIDRPAGHPEYVQA------GGLSGMPLRSRANAVIAQLYQDCAGKVPIIG 302
Query: 265 VGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VGG+ DA+EKI+AGASL+Q+YT V+ GP LV I EL +L +++G+ +S A+G
Sbjct: 303 VGGISCAADAYEKIRAGASLLQVYTGLVFKGPELVREILLELPDLFEQDGFCHISAALGT 362
Query: 325 A 325
A
Sbjct: 363 A 363
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 44 FWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL---KPLP 100
F L + +GD Y VNVSSPNT LR LQ D L LL V +LA +P
Sbjct: 164 FALEVLFPYGD---YLTVNVSSPNTPGLRLLQGADALPELLAAVAAANQRLAAEYQRPAL 220
Query: 101 PILVKIAPDLSLDEKKDIADVV 122
P+LVKIAPDL ++ IA +
Sbjct: 221 PLLVKIAPDLDPEDISAIAQLA 242
>gi|409990059|ref|ZP_11273497.1| dihydroorotate dehydrogenase 2 [Arthrospira platensis str. Paraca]
gi|291569105|dbj|BAI91377.1| dihydroorotate dehydrogenase [Arthrospira platensis NIES-39]
gi|409939082|gb|EKN80308.1| dihydroorotate dehydrogenase 2 [Arthrospira platensis str. Paraca]
Length = 382
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 129/201 (64%), Gaps = 15/201 (7%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQA +L +L TV++ N + P P+LVKIAPDL +
Sbjct: 185 DLGDYFVVNVSSPNTPGLRSLQASTELNQIL-TVLQQEN---IAPSKPLLVKIAPDLEWE 240
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY--------KEETGGLSGEPLRNKS 245
DI + L + G+I +NTT+ R ++L ++ E GG+SG PLR +S
Sbjct: 241 AIDDI--IKLARTHNLAGIIATNTTISR-DHLKTQWLPQTGNPITSEAGGISGAPLRERS 297
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
T +I +++ T G++PIIGVGG+F+ DA+EKI AGASL+Q+YT +VY GP +V R+ +
Sbjct: 298 TAVIRHIWEQTNGEIPIIGVGGIFTADDAWEKITAGASLLQVYTGWVYEGPLMVRRLLTG 357
Query: 306 LEELLQKEGYNSVSQAVGAAH 326
L L+ G N +SQA+G A+
Sbjct: 358 LLHKLEDHGLNHISQAIGLAN 378
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQA +L +L TV++ N + P P+LVKIAPDL +
Sbjct: 185 DLGDYFVVNVSSPNTPGLRSLQASTELNQIL-TVLQQEN---IAPSKPLLVKIAPDLEWE 240
Query: 114 EKKDI 118
DI
Sbjct: 241 AIDDI 245
>gi|424873553|ref|ZP_18297215.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393169254|gb|EJC69301.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 362
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQ ++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAGTSGRKIPVFLKIAPDLTEEGMDDIAAEVLSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L +LL +E S+ +
Sbjct: 316 YSCMVYEGPGLAGDIVRGLSKLLDREKAGSIRE 348
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQ ++ L LL V+ R+++A P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLAARDEMAGTSGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|429770757|ref|ZP_19302808.1| dihydroorotate oxidase [Brevundimonas diminuta 470-4]
gi|429183617|gb|EKY24661.1| dihydroorotate oxidase [Brevundimonas diminuta 470-4]
Length = 345
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 137/232 (59%), Gaps = 11/232 (4%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA +P + A +L KD D D V G+ + +A YF +N+SSPNT LR
Sbjct: 123 RLARRP-----TRTAIGANLGANKDTEDKAADYVSGLKRLAGLADYFTINISSPNTPGLR 177
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ ++ L LL + E R P+ +KIAPDL +E I + + ++D L
Sbjct: 178 ALQGREALDDLLGRINEARPADGA----PVFLKIAPDLIGEEIGMIVEASI--AHRIDAL 231
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
IVSNTT++R L + + E+GGLSG PL+ + + + + G+LP+I VGG+ SG+
Sbjct: 232 IVSNTTLERPASLRSAFAGESGGLSGAPLKPFALKALEAASEAAGGRLPLIAVGGIASGE 291
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
DAF +I+AGAS VQ+Y++ +Y GP L+ RIK +L L+ EG++S+++A A
Sbjct: 292 DAFARIRAGASAVQLYSALIYEGPGLIGRIKRDLAARLRAEGFSSMAEATAA 343
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ + +A YF +N+SSPNT LR LQ ++ L LL + E R P+ +
Sbjct: 150 YVSGLKRLAGLADYFTINISSPNTPGLRALQGREALDDLLGRINEARPADGA----PVFL 205
Query: 105 KIAPDLSLDE 114
KIAPDL +E
Sbjct: 206 KIAPDLIGEE 215
>gi|255263124|ref|ZP_05342466.1| dihydroorotate oxidase [Thalassiobium sp. R2A62]
gi|255105459|gb|EET48133.1| dihydroorotate oxidase [Thalassiobium sp. R2A62]
Length = 350
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 138/214 (64%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D K ++ G + VNVSSPNT LR LQ +D L LL V+E
Sbjct: 137 LNLGANKDSDDRASDYSKVLMTVGGHVDFATVNVSSPNTEKLRDLQGRDALAMLLGQVME 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
T + +A KPLP I +KIAPDL+ +E D+A+V + G+I +NTT+ R + L + +
Sbjct: 197 TNDTIA-KPLP-IFLKIAPDLNTNELADVAEVA--QAAGLTGIIATNTTLAR-DGLASAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K + GGLSG+PL KST +++++ +T LP+IGVGG+ S + A+ KIKAGAS VQ+Y+
Sbjct: 252 KGQAGGLSGQPLFEKSTRVLAQLSTMTD--LPLIGVGGIGSAQQAYAKIKAGASAVQLYS 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L +I EL+ LL+ +GY++V+ AVG
Sbjct: 310 AMVYSGVSLAGKIAKELDTLLEADGYSNVADAVG 343
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
++ G + VNVSSPNT LR LQ +D L LL V+ET + +A KPL PI +KIAP
Sbjct: 156 LMTVGGHVDFATVNVSSPNTEKLRDLQGRDALAMLLGQVMETNDTIA-KPL-PIFLKIAP 213
Query: 109 DLSLDEKKDIADVV 122
DL+ +E D+A+V
Sbjct: 214 DLNTNELADVAEVA 227
>gi|388583700|gb|EIM24001.1| dihydroorotate oxidase [Wallemia sebi CBS 633.66]
Length = 480
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 4/205 (1%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
AD V D VKG+ G A V+NVSSPNT LR +Q + L++LL +VV+ R +L+ K
Sbjct: 216 ADDVSDYVKGVKTLGPFADMLVINVSSPNTPGLRGMQRRSVLENLLSSVVDERQKLSNKL 275
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSG 238
PILVK+APDL DE +D+ + +DG++VSNTT+DR L + K + GGLSG
Sbjct: 276 --PILVKVAPDLGSDELEDVG--LAAKNVGIDGVVVSNTTIDRPSSLTSENKTQVGGLSG 331
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+PL KS + + E+Y T G++P++G GG+ SGKDA + AGASLVQ+YT+ Y G L
Sbjct: 332 KPLLEKSVKALKELYISTDGQVPLVGCGGISSGKDALKFAGAGASLVQLYTALGYQGVGL 391
Query: 299 VTRIKSELEELLQKEGYNSVSQAVG 323
RIK E+ + L+ G S VG
Sbjct: 392 PRRIKDEIADELKNNGIASWQAFVG 416
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G A V+NVSSPNT LR +Q + L++LL +VV+ R +L+ K PILV
Sbjct: 222 YVKGVKTLGPFADMLVINVSSPNTPGLRGMQRRSVLENLLSSVVDERQKLSNK--LPILV 279
Query: 105 KIAPDLSLDEKKDIA 119
K+APDL DE +D+
Sbjct: 280 KVAPDLGSDELEDVG 294
>gi|405374435|ref|ZP_11028899.1| Dihydroorotate dehydrogenase [Chondromyces apiculatus DSM 436]
gi|397086940|gb|EJJ18018.1| Dihydroorotate dehydrogenase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 360
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D V + + Y VVN SSPNT LRKLQ +QL LL V E +V P
Sbjct: 157 AVEDYVACVDALAALGDYVVVNASSPNTPGLRKLQEPEQLTQLLGAVQE--RLASVAPGK 214
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYLDARYKEETGGLSGE 239
P+ +KIAPDL+ + ++ DV CK+ GLI +NTT+ R +E+ A+ E GGLSG
Sbjct: 215 PLFLKIAPDLTPEAVDEVVDVA--RACKLAGLIATNTTLARPFEHPLAK---EAGGLSGA 269
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
P+R + +I Y G LPIIGVGGVF+ +D +EK++AGAS+VQ+YT F+Y GP +V
Sbjct: 270 PVREPANAVIRRAYLRGDGALPIIGVGGVFTAQDVYEKLRAGASVVQVYTGFIYEGPGMV 329
Query: 300 TRIKSELEELLQKEGYNSVSQAVGAAHKS 328
I L LL ++G+ V A+GA H+
Sbjct: 330 GHILPALATLLARDGFKQVRDAIGAEHRG 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y VVN SSPNT LRKLQ +QL LL V E +A P P+ +KIAPDL+ + +
Sbjct: 174 YVVVNASSPNTPGLRKLQEPEQLTQLLGAVQERLASVA--PGKPLFLKIAPDLTPEAVDE 231
Query: 118 IADVV 122
+ DV
Sbjct: 232 VVDVA 236
>gi|421861494|ref|ZP_16293496.1| dihydroorotate dehydrogenase [Paenibacillus popilliae ATCC 14706]
gi|410828920|dbj|GAC43933.1| dihydroorotate dehydrogenase [Paenibacillus popilliae ATCC 14706]
Length = 351
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 151/240 (62%), Gaps = 10/240 (4%)
Query: 91 RNQLALKPLP-PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTA 149
R+ AL+ P P+ V I + + ++ AD L ++ + VA FV+N+SSPNT
Sbjct: 119 RSLAALRKRPIPVWVNIGKNKATPNEQAQADY-LSCLRTLYP---VADLFVINISSPNTP 174
Query: 150 NLRKLQAKDQLKHLLKTVVETRNQLAVKPL--PPILVKIAPDLSLDEKKDIADVVLDSKC 207
+LR LQ D+LK LL+ V +L K +LVKIAPD+S E + + + ++ S
Sbjct: 175 DLRNLQHGDELKSLLQAAVSEMKRLNAKHGRNKAVLVKIAPDVSDAELEQMTNTIMASG- 233
Query: 208 KVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGG 267
V G+I +NTTV R + + E GGLSG PL +ST+++S++Y+LT G LPIIG GG
Sbjct: 234 -VQGIIATNTTVSRMGAGHSS-RLEAGGLSGRPLEERSTQVVSQLYRLTNGSLPIIGSGG 291
Query: 268 VFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VFS +DA+ KI+AGASLV+IYT+F+Y GP + + + L LL ++GY +S+AVGA H+
Sbjct: 292 VFSAEDAYRKIRAGASLVEIYTAFIYRGPGVNRDLAAGLARLLARDGYRHISEAVGADHR 351
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDLSL 112
VA FV+N+SSPNT +LR LQ D+LK LL+ V +L K +LVKIAPD+S
Sbjct: 160 VADLFVINISSPNTPDLRNLQHGDELKSLLQAAVSEMKRLNAKHGRNKAVLVKIAPDVSD 219
Query: 113 DEKKDIADVVLDS-VKGIL 130
E + + + ++ S V+GI+
Sbjct: 220 AELEQMTNTIMASGVQGII 238
>gi|333372583|ref|ZP_08464508.1| dihydroorotate oxidase [Desmospora sp. 8437]
gi|332972948|gb|EGK10890.1| dihydroorotate oxidase [Desmospora sp. 8437]
Length = 349
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 144/235 (61%), Gaps = 5/235 (2%)
Query: 91 RNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTAN 150
R +L LP ++ I +L + K + D G+ YFV+N+SSPNT
Sbjct: 115 RASTSLATLPRPVIPIGINLGKNRKTPGEEAAGDYRTGLRALYRHGDYFVINISSPNTQG 174
Query: 151 LRKLQAKDQLKHLLKTVVETRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCK 208
LR LQ D L LL ++E R +L + P+ VK+APDLS D + + L+
Sbjct: 175 LRDLQQADSLAKLLSILIEEREELRDETGEIRPLFVKLAPDLSRDALSEAVRIGLEQG-- 232
Query: 209 VDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGV 268
+DG I NTT+ R E L + ++ E+GGLSG PL+++S + I +++++++GK+PIIGVGG+
Sbjct: 233 IDGFIAVNTTLAREE-LTSPHRTESGGLSGRPLQHRSIQWIRQIHRVSEGKVPIIGVGGI 291
Query: 269 FSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
F GKDA+ I+AGASLVQ+YT +Y GP + I EL +LL+++G +S++ AVG
Sbjct: 292 FDGKDAYRTIRAGASLVQVYTGMIYRGPSIARAINLELLQLLEQDGLSSITDAVG 346
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 46 LLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPIL 103
L + + GD YFV+N+SSPNT LR LQ D L LL ++E R +L + P+
Sbjct: 153 LRALYRHGD---YFVINISSPNTQGLRDLQQADSLAKLLSILIEEREELRDETGEIRPLF 209
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKF 132
VK+APDLS D + + L+ +GI F
Sbjct: 210 VKLAPDLSRDALSEAVRIGLE--QGIDGF 236
>gi|316932336|ref|YP_004107318.1| dihydroorotate dehydrogenase [Rhodopseudomonas palustris DX-1]
gi|315600050|gb|ADU42585.1| dihydroorotate dehydrogenase [Rhodopseudomonas palustris DX-1]
Length = 364
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D VK I F +A YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSDDRVADYVKLIETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVID 197
Query: 170 TRNQL-AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R ++ A P+L+KIAPDLSL E D+ + +VDG+IV+NTT+ R L R
Sbjct: 198 ARERVRAAAGDTPVLLKIAPDLSLGELDDVVHIA--RSRRVDGMIVANTTLSRSPTLRDR 255
Query: 229 YK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGA+LVQ+
Sbjct: 256 TRIGEQGGLSGRPLFRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALTKIRAGATLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y++ VY G LV IK++L L + G S+++ VGA
Sbjct: 316 YSALVYKGLGLVESIKADLASTLLRTGRESLAEIVGA 352
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKPLPPILVKIA 107
I F +A YF VNVSSPNT LR LQ L LL V++ R ++ A P+L+KIA
Sbjct: 157 IETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIDARERVRAAAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDLSL E D+ +
Sbjct: 217 PDLSLGELDDVVHI 230
>gi|71018263|ref|XP_759362.1| hypothetical protein UM03215.1 [Ustilago maydis 521]
gi|46099087|gb|EAK84320.1| hypothetical protein UM03215.1 [Ustilago maydis 521]
Length = 799
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 175/309 (56%), Gaps = 26/309 (8%)
Query: 28 HNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTA--NLRKLQAKDQLKHLLK 85
HN++ S R R ++ WLL VA+ ++SP++A N R+L A K
Sbjct: 215 HNVILSRLRDR---IRRWLL---HSSSVANLQDALLASPDSASVNARQLIAT-HPKSTSA 267
Query: 86 TVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSS 145
V T +L+P + + + + + +E+ V D VKG+ + G A +VNVSS
Sbjct: 268 FVDATDLPRSLRPAKMLGINLGKNKTSNEES-----VDDYVKGVERLGPYADMIIVNVSS 322
Query: 146 PNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--------PILVKIAPDLSLDEKKD 197
PNT LR+LQ + L+ LL VV R+ + L P+LVKIAPDLS +E D
Sbjct: 323 PNTPGLRRLQRRGVLEDLLTQVVRARDGMVESHLRFSDKKVAVPLLVKIAPDLSEEELHD 382
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETGGLSGEPLRNKSTELISEMYKLT 256
+AD L K +DGL++SNTT+ R L + + ETGGLSG P++ + + ++ ++K
Sbjct: 383 VADAAL--KSGIDGLVISNTTISRPASLRSSEHVRETGGLSGAPVKPLALKALTTVHKRL 440
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+GKLPIIG GG+ +G+DA + KAGAS +++YTSF Y G L R+K EL ELL+ EG
Sbjct: 441 QGKLPIIGCGGISNGQDALDYAKAGASAIELYTSFGYQGVGLPRRLKDELVELLKAEG-K 499
Query: 317 SVSQAVGAA 325
+ Q VG+
Sbjct: 500 TWQQVVGSG 508
>gi|440684967|ref|YP_007159762.1| dihydroorotate oxidase A [Anabaena cylindrica PCC 7122]
gi|428682086|gb|AFZ60852.1| dihydroorotate oxidase A [Anabaena cylindrica PCC 7122]
Length = 377
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 131/201 (65%), Gaps = 16/201 (7%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ L +L V++T N K PI VKIAPDL
Sbjct: 184 DLGDYFVVNVSSPNTPGLRSLQDASMLSQILD-VLQTEN----KSQKPIFVKIAPDL--- 235
Query: 194 EKKDIADVVLDSKC-KVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKS 245
E IAD++ +K K+ G+I +NTT+ R E +EE GG+SG+PL ++S
Sbjct: 236 EWSAIADIITLAKTYKLAGIIATNTTISREGLKTQLIEKTGKSPQEEAGGISGKPLCDRS 295
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
T +I +Y+ T+G++PIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y GP +V RI +
Sbjct: 296 TAVIRFIYQQTQGEIPIIGVGGIFTPEDAWEKITAGASLIQVYTGWIYEGPMMVNRILAG 355
Query: 306 LEELLQKEGYNSVSQAVGAAH 326
L L++ G NS+S+AVG +
Sbjct: 356 LLTKLEENGLNSISEAVGIGN 376
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ L +L V++T N K PI VKIAPDL
Sbjct: 184 DLGDYFVVNVSSPNTPGLRSLQDASMLSQILD-VLQTEN----KSQKPIFVKIAPDL--- 235
Query: 114 EKKDIADVV 122
E IAD++
Sbjct: 236 EWSAIADII 244
>gi|295687850|ref|YP_003591543.1| dihydroorotate dehydrogenase [Caulobacter segnis ATCC 21756]
gi|295429753|gb|ADG08925.1| dihydroorotate dehydrogenase [Caulobacter segnis ATCC 21756]
Length = 352
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 4/217 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ KD D + D V G+ + ++ YF N+SSPNT LR LQ K L+ LL + E
Sbjct: 138 NIGANKDATDRIQDYVTGLTRLWGLSDYFTANISSPNTPGLRALQTKAALEELLGRLAEA 197
Query: 171 RNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R L + PI +K+APDL E + I + V+ + +D +IVSNTT+ R + L +
Sbjct: 198 RATLKAQSGRDYPIFLKVAPDLEDGEVEAIVETVVGAS--LDAIIVSNTTIARPDTLKSP 255
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E+GGLSG PL ST ++ + G++ +IG GG+ SG DA+ KI+AGA VQ+Y
Sbjct: 256 LAGESGGLSGAPLLEASTAVLKRFHAAAGGRVALIGAGGIASGADAYAKIRAGAQAVQLY 315
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
++ VY GP LV RIK EL L+ +G+ +V AVGAA
Sbjct: 316 SALVYGGPGLVVRIKRELAARLRADGFAAVQDAVGAA 352
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP- 100
+Q ++ G+ + ++ YF N+SSPNT LR LQ K L+ LL + E R L +
Sbjct: 149 IQDYVTGLTRLWGLSDYFTANISSPNTPGLRALQTKAALEELLGRLAEARATLKAQSGRD 208
Query: 101 -PILVKIAPDLSLDEKKDIADVVLDS 125
PI +K+APDL E + I + V+ +
Sbjct: 209 YPIFLKVAPDLEDGEVEAIVETVVGA 234
>gi|428306076|ref|YP_007142901.1| dihydroorotate oxidase A [Crinalium epipsammum PCC 9333]
gi|428247611|gb|AFZ13391.1| dihydroorotate oxidase A [Crinalium epipsammum PCC 9333]
Length = 395
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 135/199 (67%), Gaps = 18/199 (9%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ+ +QL +L T+ ++ NQ PILVKIAPDL D
Sbjct: 201 DLGDYFVVNVSSPNTPGLRSLQSSEQLAVILDTL-QSENQ----GHKPILVKIAPDLEFD 255
Query: 194 EKKDIADVV-LDSKCKVDGLIVSNTTVDRYEYLDAR--------YKEETGGLSGEPLRNK 244
IADV+ + + + G+I +NTT+ R E L+ + +EE GG+SG PLR++
Sbjct: 256 A---IADVLTIAQRYNLAGIIATNTTISR-ENLNTQVLKATGNNIREEAGGISGLPLRDR 311
Query: 245 STELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKS 304
STE+I +++ T+GKLPIIGVGG+F+ +DA++KI AGASL+Q+YT ++Y GP +V RI
Sbjct: 312 STEVIRFIWQQTQGKLPIIGVGGIFTPEDAWQKITAGASLLQLYTGWIYQGPWIVRRIME 371
Query: 305 ELEELLQKEGYNSVSQAVG 323
L + L++ S+S+A+G
Sbjct: 372 GLLQKLEEHKLASISEAIG 390
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ+ +QL +L T +++ NQ PILVKIAPDL D
Sbjct: 201 DLGDYFVVNVSSPNTPGLRSLQSSEQLAVILDT-LQSENQ----GHKPILVKIAPDLEFD 255
Query: 114 EKKDIADVV 122
IADV+
Sbjct: 256 A---IADVL 261
>gi|77464537|ref|YP_354041.1| dihydroorotate dehydrogenase 2 [Rhodobacter sphaeroides 2.4.1]
gi|123590992|sp|Q3IZ94.1|PYRD_RHOS4 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|77388955|gb|ABA80140.1| dihydroorotate oxidase A [Rhodobacter sphaeroides 2.4.1]
Length = 354
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 146/231 (63%), Gaps = 9/231 (3%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P + V L+L KD D D + G A + VNVSSPNT LR
Sbjct: 125 RLAMRPRGAVPV----GLNLGANKDSPDRAADFAAVLAACGPHADFATVNVSSPNTERLR 180
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LL+ V++ + A +P+P + +KIAPDLS + +IA+V L S + G+
Sbjct: 181 DLQGRQALTALLEGVMQVQAGFA-RPVP-VFLKIAPDLSDADLAEIAEVALASG--IAGI 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
+ +NTT+ R + L + + ETGGLSG PL +ST +++ + +LT+G+LP+IGVGGV S +
Sbjct: 237 VATNTTLAR-DGLRSAHARETGGLSGAPLFERSTRVLARLSELTEGRLPLIGVGGVASAE 295
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+A+ KI+AGAS VQ+YT+ VY G L RI L+ LL ++G+ SV++AVG
Sbjct: 296 EAYAKIRAGASAVQLYTAMVYQGIGLAARIARGLDALLLRDGFGSVAEAVG 346
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G A + VNVSSPNT LR LQ + L LL+ V++ + A +P+ P+ +KIAPDLS
Sbjct: 161 GPHADFATVNVSSPNTERLRDLQGRQALTALLEGVMQVQAGFA-RPV-PVFLKIAPDLSD 218
Query: 113 DEKKDIADVVLDS-VKGIL 130
+ +IA+V L S + GI+
Sbjct: 219 ADLAEIAEVALASGIAGIV 237
>gi|221640447|ref|YP_002526709.1| dihydroorotate dehydrogenase 2 [Rhodobacter sphaeroides KD131]
gi|254788899|sp|B9KNA2.1|PYRD_RHOSK RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|221161228|gb|ACM02208.1| Dihydroorotate oxidase A [Rhodobacter sphaeroides KD131]
Length = 354
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 146/231 (63%), Gaps = 9/231 (3%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P + V L+L KD D D + G A + VNVSSPNT LR
Sbjct: 125 RLAMRPRGAVPV----GLNLGANKDSPDRAADFAAVLAACGPHADFATVNVSSPNTERLR 180
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LL+ V++ + A +P+P + +KIAPDLS + +IA+V L S + G+
Sbjct: 181 DLQGRQALTALLEGVMQVQAGFA-RPVP-VFLKIAPDLSDADLAEIAEVALASG--IAGI 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
+ +NTT+ R + L + + ETGGLSG PL +ST +++ + +LT+G+LP+IGVGGV S +
Sbjct: 237 VATNTTLAR-DGLRSAHARETGGLSGAPLFERSTRVLARLSELTEGRLPLIGVGGVASAE 295
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+A+ KI+AGAS VQ+YT+ VY G L RI L+ LL ++G+ SV++AVG
Sbjct: 296 EAYAKIRAGASAVQLYTAMVYQGIGLAARIARGLDALLLRDGFGSVAEAVG 346
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G A + VNVSSPNT LR LQ + L LL+ V++ + A +P+ P+ +KIAPDLS
Sbjct: 161 GPHADFATVNVSSPNTERLRDLQGRQALTALLEGVMQVQAGFA-RPV-PVFLKIAPDLSD 218
Query: 113 DEKKDIADVVLDS-VKGIL 130
+ +IA+V L S + GI+
Sbjct: 219 ADLAEIAEVALASGIAGIV 237
>gi|150395388|ref|YP_001325855.1| dihydroorotate dehydrogenase 2 [Sinorhizobium medicae WSM419]
gi|166215965|sp|A6U5U0.1|PYRD_SINMW RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|150026903|gb|ABR59020.1| Dihydroorotate oxidase [Sinorhizobium medicae WSM419]
Length = 362
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRIADYVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLATLLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A K P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 AREDEAGKCGRRVPVFLKIAPDLTEEGMDDIAAEVLAQG--LDGLIVSNTTLARARLRDR 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG+PL KST +++ M + LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 KQASEVGGLSGKPLFEKSTAVLARMRRRVGPDLPIIGVGGVSSAETAAEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L RI L L +E S+ +
Sbjct: 316 YSCMVYEGPSLPGRIVRGLSALCDREKLASIRE 348
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R A K P+
Sbjct: 153 YVTGIRTFYAVARYFTANISSPNTPGLRDLQARESLATLLSAVLAAREDEAGKCGRRVPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|126463377|ref|YP_001044491.1| dihydroorotate dehydrogenase 2 [Rhodobacter sphaeroides ATCC 17029]
gi|189038445|sp|A3PN03.1|PYRD_RHOS1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|126105041|gb|ABN77719.1| dihydroorotate oxidase A [Rhodobacter sphaeroides ATCC 17029]
Length = 354
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 146/231 (63%), Gaps = 9/231 (3%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P + V L+L KD D D + G A + VNVSSPNT LR
Sbjct: 125 RLAMRPRGAVPV----GLNLGANKDSPDRAADFAAVLAACGPHADFATVNVSSPNTERLR 180
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LL+ V++ + A +P+P + +KIAPDLS + +IA+V L S + G+
Sbjct: 181 DLQGRQALTALLEGVMQVQAGFA-RPVP-VFLKIAPDLSDADLAEIAEVALASG--IAGI 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
+ +NTT+ R + L + + ETGGLSG PL +ST +++ + +LT+G+LP+IGVGGV S +
Sbjct: 237 VATNTTLAR-DGLRSAHARETGGLSGAPLFERSTRVLARLSELTEGRLPLIGVGGVASAE 295
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+A+ KI+AGAS VQ+YT+ VY G L RI L+ LL ++G+ SV++AVG
Sbjct: 296 EAYAKIRAGASAVQLYTAMVYQGIGLAARIARGLDALLLRDGFGSVAEAVG 346
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G A + VNVSSPNT LR LQ + L LL+ V++ + A +P+ P+ +KIAPDLS
Sbjct: 161 GPHADFATVNVSSPNTERLRDLQGRQALTALLEGVMQVQAGFA-RPV-PVFLKIAPDLSD 218
Query: 113 DEKKDIADVVLDS-VKGIL 130
+ +IA+V L S + GI+
Sbjct: 219 ADLAEIAEVALASGIAGIV 237
>gi|443316452|ref|ZP_21045895.1| dihydroorotate oxidase A [Leptolyngbya sp. PCC 6406]
gi|442783952|gb|ELR93849.1| dihydroorotate oxidase A [Leptolyngbya sp. PCC 6406]
Length = 404
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 18/207 (8%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
+S + + +GD YFVVNVSSPNT LR LQ + QL +L ++ N A P+L
Sbjct: 206 ESFRWLKTWGD---YFVVNVSSPNTPGLRSLQGRAQLAPIL-AALQAENTEAK----PLL 257
Query: 184 VKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDRYEYLDARYK------EETGGL 236
VKIAPDL+ + DIAD+V L + + G+I +NTT+DR R EE GG+
Sbjct: 258 VKIAPDLAWE---DIADIVDLAQEQGLAGIIATNTTIDRTGLSTPRLSTGLTPAEEAGGI 314
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG PLR +STE+I +Y+ ++G LPIIGVGG+F+ DA++KI AGASLVQIYT ++Y GP
Sbjct: 315 SGAPLRQRSTEVIRFIYRHSQGALPIIGVGGIFTADDAWDKITAGASLVQIYTGWIYEGP 374
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVG 323
+V R+ + L + L +G ++ A+G
Sbjct: 375 WMVPRLLAGLVDKLDDQGLTQITDAIG 401
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
+GD YFVVNVSSPNT LR LQ + QL +L ++ N A P+LVKIAPDL+
Sbjct: 214 WGD---YFVVNVSSPNTPGLRSLQGRAQLAPIL-AALQAENTEA----KPLLVKIAPDLA 265
Query: 112 LDEKKDIADVV 122
++ DI D+
Sbjct: 266 WEDIADIVDLA 276
>gi|71082915|ref|YP_265634.1| dihydroorotate dehydrogenase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062028|gb|AAZ21031.1| Dihydroorotate dehydrogenase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 350
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 138/214 (64%), Gaps = 4/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D + G+ F D+A Y VN+SSPNT NLR + + LL +
Sbjct: 136 INIGPNKDSEDRLNDYLIGLRNFYDIADYIAVNISSPNTENLRAFHDETKFDELLNAI-- 193
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ ++ +K PI+VKI+PD+S ++ + I+ +++ K KV +IVSNTT E L+
Sbjct: 194 EKEKVKLKSKIPIVVKISPDISDEQIELISKILI--KHKVSAIIVSNTTAKNREKLNNIL 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K + GGLSG+PL ++ +LIS+ YKL KGK+ IIGVGGV SG+ A++K +AGAS VQ+YT
Sbjct: 252 KHQKGGLSGKPLEEEANKLISKFYKLLKGKIEIIGVGGVDSGESAYKKFQAGASYVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
V+ GP +V +IK EL+E+L EG + + +G
Sbjct: 312 GMVFQGPNIVGKIKKELKEILIDEGIKNFKEIIG 345
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
L +L+G+ F D+A Y VN+SSPNT NLR + + LL + + ++ LK P
Sbjct: 148 LNDYLIGLRNFYDIADYIAVNISSPNTENLRAFHDETKFDELLNAI--EKEKVKLKSKIP 205
Query: 102 ILVKIAPDLSLDEKKDIADVVL 123
I+VKI+PD+S DE+ ++ +L
Sbjct: 206 IVVKISPDIS-DEQIELISKIL 226
>gi|90422275|ref|YP_530645.1| dihydroorotate dehydrogenase 2 [Rhodopseudomonas palustris BisB18]
gi|90104289|gb|ABD86326.1| dihydroorotate oxidase A [Rhodopseudomonas palustris BisB18]
Length = 364
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD D V D V+ I F VA YF VNVSSPNT LR LQ L LL V+E R+++
Sbjct: 143 NKDSLDRVADYVRLIETFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIEARDRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEE 232
P+L+KIAPDL+L+E D+ + +VDG+IV+NTT+ R + L D +E
Sbjct: 203 QQNAGDSPVLLKIAPDLTLNELDDVVHIA--RSRRVDGMIVANTTLSRSQALRDKARAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E + +G P+IGVGG+ SG A KI+AGA+L+Q+Y+S +
Sbjct: 261 PGGLSGRPLFRLSTRMVAETFVRAEGAFPLIGVGGIDSGGAALTKIRAGATLIQLYSSLI 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G L+ IK++L L + G +S+ + VGA
Sbjct: 321 YKGLGLLDAIKTDLASTLLRTGRDSLGEIVGA 352
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V+E R+++ P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIEARDRVQQNAGDSPVLLKIA 216
Query: 108 PDLSLDEKKDIADVV 122
PDL+L+E D+ +
Sbjct: 217 PDLTLNELDDVVHIA 231
>gi|91762662|ref|ZP_01264627.1| Dihydroorotate dehydrogenase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718464|gb|EAS85114.1| Dihydroorotate dehydrogenase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 350
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 138/214 (64%), Gaps = 4/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D + G+ F D+A Y VN+SSPNT NLR + + LL +
Sbjct: 136 INIGPNKDSEDRLNDYLIGLRNFYDIADYITVNISSPNTENLRAFHDETKFDELLNAI-- 193
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ ++ +K PI+VKI+PD+S ++ + I+ +++ K KV +IVSNTT E L+
Sbjct: 194 EKEKVKLKSKIPIVVKISPDISDEQIELISKILI--KHKVSAIIVSNTTAKNREKLNNIL 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K + GGLSG+PL ++ +LIS+ YKL KGK+ IIGVGGV SG+ A++K +AGAS VQ+YT
Sbjct: 252 KHQKGGLSGKPLEEEANKLISKFYKLLKGKIEIIGVGGVDSGESAYKKFQAGASYVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
V+ GP +V +IK EL+E+L EG + + +G
Sbjct: 312 GMVFQGPNIVGKIKKELKEILIDEGIKNFKEIIG 345
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
L +L+G+ F D+A Y VN+SSPNT NLR + + LL + + ++ LK P
Sbjct: 148 LNDYLIGLRNFYDIADYITVNISSPNTENLRAFHDETKFDELLNAI--EKEKVKLKSKIP 205
Query: 102 ILVKIAPDLSLDEKKDIADVVL 123
I+VKI+PD+S DE+ ++ +L
Sbjct: 206 IVVKISPDIS-DEQIELISKIL 226
>gi|319403709|emb|CBI77294.1| Dihydroorotate dehydrogenase [Bartonella rochalimae ATCC BAA-1498]
Length = 362
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 132/212 (62%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D V GI F DVA YF +NVSSPNT LR LQ +D L L++ + +
Sbjct: 136 VNIGANKDAVNRIDDYVSGIACFYDVADYFALNVSSPNTPGLRNLQIRDSLHFLIQAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K PI +KIAPDL+ E D+A + S DGLI+SNTT+ R D+
Sbjct: 196 ARSEQKEKHGFSIPIFLKIAPDLTEKELDDVAQEI--SASDFDGLIISNTTLSRRGLTDS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R+ +E GGLSG PL +ST ++++M K + IIGVGGV + A EK+KAGA L+QI
Sbjct: 254 RWIDEEGGLSGRPLFERSTIVLAKMRKKLGKDIAIIGVGGVRDAQTALEKVKAGADLIQI 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
Y+ +Y GP + I E+ +L+Q+EG ++++
Sbjct: 314 YSGMIYEGPNIAVTIMEEILKLMQQEGVDNIT 345
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F DVA YF +NVSSPNT LR LQ +D L L++ + + R++ K PI
Sbjct: 151 YVSGIACFYDVADYFALNVSSPNTPGLRNLQIRDSLHFLIQAISQARSEQKEKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ E D+A
Sbjct: 211 FLKIAPDLTEKELDDVA 227
>gi|434388171|ref|YP_007098782.1| dihydroorotate dehydrogenase, subfamily 2 [Chamaesiphon minutus PCC
6605]
gi|428019161|gb|AFY95255.1| dihydroorotate dehydrogenase, subfamily 2 [Chamaesiphon minutus PCC
6605]
Length = 376
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 140/228 (61%), Gaps = 16/228 (7%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I +L + ++ D D + + D+ YFV+NVSSPNT LR LQ + L+ +
Sbjct: 153 IPIGINLGKSKITELEDAATDYLGSFQRLKDLGDYFVINVSSPNTPGLRTLQEIEPLRII 212
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDRY 222
T+ + NQ PILVKIAPDL+ + DI+ VV L K+ G+I +NTT+DR
Sbjct: 213 FDTL-QQENQ----GRKPILVKIAPDLAWE---DISAVVELSQASKLAGIIATNTTLDRS 264
Query: 223 EY---LDAR----YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
+ + AR EE GG+SG P+R KSTE+I +++ T G LPIIGVGG+F+ DA+
Sbjct: 265 QLTTKIIARTGKTVTEEAGGISGAPVRQKSTEVIRFIHQQTGGSLPIIGVGGIFTADDAW 324
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
EKI AGASL+Q+YT + Y+GP +V RI + L L+ G S+S+AVG
Sbjct: 325 EKITAGASLIQVYTGWTYNGPWMVDRILTGLLAKLEARGLRSISEAVG 372
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFV+NVSSPNT LR LQ + L+ + T ++ NQ PILVKIAPDL+ +
Sbjct: 183 DLGDYFVINVSSPNTPGLRTLQEIEPLRIIFDT-LQQENQ----GRKPILVKIAPDLAWE 237
Query: 114 EKKDIADVV 122
DI+ VV
Sbjct: 238 ---DISAVV 243
>gi|393772861|ref|ZP_10361261.1| dihydroorotate oxidase [Novosphingobium sp. Rr 2-17]
gi|392721600|gb|EIZ79065.1| dihydroorotate oxidase [Novosphingobium sp. Rr 2-17]
Length = 347
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 133/215 (61%), Gaps = 3/215 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D K A Y VN+SSPNT LR LQ + L LL V+E
Sbjct: 135 VNIGANKDSADRVADYGKMARIMAPYASYLAVNISSPNTPGLRALQDESALTGLLDAVIE 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ + PPI +K+APDL + IA + +D + + LIV+NTT+ R L + +
Sbjct: 195 ARDAVCPAAAPPIFLKVAPDLEPADIDAIARIAIDKR--LGALIVANTTISR-PSLASAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E+GGLSG PLRN + + + + T G +P++GVGG+ + +DA+ +I+AGASLVQ+Y+
Sbjct: 252 AGESGGLSGAPLRNMAHQRLRDFRSATGGAVPLVGVGGITTAEDAWARIRAGASLVQLYS 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP + I + L +L+Q++G+ S+++AVG+
Sbjct: 312 AMVYEGPGIAKAICAGLVKLMQRDGFTSIAEAVGS 346
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VN+SSPNT LR LQ + L LL V+E R+ + PPI +K+APDL +
Sbjct: 161 ASYLAVNISSPNTPGLRALQDESALTGLLDAVIEARDAVCPAAAPPIFLKVAPDLEPADI 220
Query: 116 KDIADVVLDSVKGIL 130
IA + +D G L
Sbjct: 221 DAIARIAIDKRLGAL 235
>gi|112950051|gb|ABI26629.1| dihydroorotate dehydrogenase [Ustilago maydis]
Length = 677
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 175/309 (56%), Gaps = 26/309 (8%)
Query: 28 HNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTA--NLRKLQAKDQLKHLLK 85
HN++ S R R ++ WLL VA+ ++SP++A N R+L A K
Sbjct: 215 HNVILSRLRDR---IRRWLL---HSSSVANLQDALLASPDSASVNARQLIAT-HPKSTSA 267
Query: 86 TVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSS 145
V T +L+P + + + + + +E+ V D VKG+ + G A +VNVSS
Sbjct: 268 FVDATDLPRSLRPAKMLGINLGKNKTSNEES-----VDDYVKGVERLGPYADMIIVNVSS 322
Query: 146 PNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--------PILVKIAPDLSLDEKKD 197
PNT LR+LQ + L+ LL VV R+ + L P+LVKIAPDLS +E D
Sbjct: 323 PNTPGLRRLQRRGVLEDLLTQVVRARDGMVESHLRFSDKKVAVPLLVKIAPDLSEEELHD 382
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETGGLSGEPLRNKSTELISEMYKLT 256
+AD L K +DGL++SNTT+ R L + + ETGGLSG P++ + + ++ ++K
Sbjct: 383 VADAAL--KSGIDGLVISNTTISRPASLRSSEHVRETGGLSGAPVKPLALKALTTVHKRL 440
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
+GKLPIIG GG+ +G+DA + KAGAS +++YTSF Y G L R+K EL ELL+ EG
Sbjct: 441 QGKLPIIGCGGISNGQDALDYAKAGASAIELYTSFGYQGVGLPRRLKDELVELLKAEG-K 499
Query: 317 SVSQAVGAA 325
+ Q VG+
Sbjct: 500 TWQQVVGSG 508
>gi|149185222|ref|ZP_01863539.1| dihydroorotate dehydrogenase [Erythrobacter sp. SD-21]
gi|148831333|gb|EDL49767.1| dihydroorotate dehydrogenase [Erythrobacter sp. SD-21]
Length = 288
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 131/215 (60%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D +A Y VN+SSPNT LR LQ + L LL V E
Sbjct: 80 VNIGANKDSEDRIADYATMARVLAPLATYLAVNISSPNTPGLRALQDESALTGLLDAVFE 139
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + PP+ +K+APDL + IA + ++ K+ LIVSNTT+ R L +RY
Sbjct: 140 ARGEDG----PPVFLKVAPDLEPADIDAIARIA--AEKKLGALIVSNTTITRPP-LRSRY 192
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG PLR+ + + + + T G +P++GVGG+ S +DA+ +IKAGASLVQ+Y+
Sbjct: 193 AKEAGGLSGAPLRDLALQRVRDFRTATGGAIPLVGVGGIASAEDAWARIKAGASLVQLYS 252
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP L RI LE+L+++EGY S+ QAVG+
Sbjct: 253 AMVYKGPGLPRRITRGLEKLMRREGYASIEQAVGS 287
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G E R+++R R G G N S R+ + +L L A Y VN
Sbjct: 59 GGAEIAARRLVARQGRPGVVGVNIGANK-DSEDRIADYATMARVLAPL-----ATYLAVN 112
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ + L LL V E R + PP+ +K+APDL + IA +
Sbjct: 113 ISSPNTPGLRALQDESALTGLLDAVFEARGEDG----PPVFLKVAPDLEPADIDAIARIA 168
Query: 123 LDSVKGIL 130
+ G L
Sbjct: 169 AEKKLGAL 176
>gi|146420132|ref|XP_001486024.1| hypothetical protein PGUG_01695 [Meyerozyma guilliermondii ATCC
6260]
Length = 412
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 132/208 (63%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ RN +
Sbjct: 196 KNKFGDEVEDYVKGVSRLGPYADVLVVNVSSPNTPGLRDLQSEGKLTNLLSTVVQERNAV 255
Query: 175 A---VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY----LDA 227
V +P +LVK+APDL+ E + IA+ + + KVDG+I+SNTT+ R D+
Sbjct: 256 GKNMVGKVPSVLVKVAPDLTEPEIESIANSAI--QAKVDGIIISNTTIQRPTQSLLTTDS 313
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+TGGLSG+PL+ S + + ++K TK L ++G GGV SGKD E KAGAS+VQ
Sbjct: 314 NLINQTGGLSGKPLKPLSLKALRTLHKYTKDSNLVLVGCGGVSSGKDVLEFGKAGASIVQ 373
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP L +IK EL E LQKEG
Sbjct: 374 LYTAFAYRGPGLPLKIKDELVEELQKEG 401
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---LKPLPP 101
++ G+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ RN + + +P
Sbjct: 206 YVKGVSRLGPYADVLVVNVSSPNTPGLRDLQSEGKLTNLLSTVVQERNAVGKNMVGKVPS 265
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+LVK+APDL+ E + IA+ + + V GI+
Sbjct: 266 VLVKVAPDLTEPEIESIANSAIQAKVDGII 295
>gi|374572573|ref|ZP_09645669.1| dihydroorotate dehydrogenase, subfamily 2 [Bradyrhizobium sp.
WSM471]
gi|374420894|gb|EHR00427.1| dihydroorotate dehydrogenase, subfamily 2 [Bradyrhizobium sp.
WSM471]
Length = 365
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 130/213 (61%), Gaps = 6/213 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD D V D VK I F VA YF VNVSSPNT LR LQ L LL V++ R ++
Sbjct: 143 NKDSPDRVNDYVKLIETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVIDARQRV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--DARYKE 231
P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L + R KE
Sbjct: 203 RESAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARPSTLREETRAKE 260
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
+ GGLSG PL ST +++E Y +G P+IGVGGV SG A KI+AGASL+Q+Y+S
Sbjct: 261 Q-GGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGVDSGGAALTKIRAGASLIQLYSSL 319
Query: 292 VYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VY G LV IK +L L + G +S+S+ VG+
Sbjct: 320 VYKGLGLVDEIKRDLASTLLRTGRDSLSEIVGS 352
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF VNVSSPNT LR LQ L LL V++ R ++ P+L+KIA
Sbjct: 157 IETFAPVASYFTVNVSSPNTPGLRNLQEGALLDDLLARVIDARQRVRESAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVV 122
PDLSL + D+ V
Sbjct: 217 PDLSLAQLDDVVQVA 231
>gi|182678054|ref|YP_001832200.1| dihydroorotate oxidase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633937|gb|ACB94711.1| Dihydroorotate oxidase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 361
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 129/219 (58%), Gaps = 7/219 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D D VKGI F D A YF +N+SSPNT LR LQ L L+ +
Sbjct: 138 INIGANKDSLDRAEDYVKGIHAFADCADYFTINISSPNTPALRDLQQPLALDDLVVRALA 197
Query: 170 TRNQLAVK-PLPPILVKIAPDLSLDEKKDIADVVLDSKC--KVDGLIVSNTTVDRYEYLD 226
R+ A + P+LVKIAPDL+L E D ++ C KVDGLIVSNTT+ R L
Sbjct: 198 ARDAEAERHGRKPVLVKIAPDLTLSE----LDAIVKITCARKVDGLIVSNTTLSRPSDLQ 253
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E GGLSG+PL + ST +++E + + + P+IGVGG+ S + A KI+AGA+LVQ
Sbjct: 254 DPQAREAGGLSGKPLFDLSTRMLAETFVRVENQFPLIGVGGIDSAETALAKIEAGATLVQ 313
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+Y+ V+ GP LV RI EL LL Y + AVGAA
Sbjct: 314 LYSGLVFQGPGLVRRILGELPRLLTARNYPRLVDAVGAA 352
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK-PLPPIL 103
++ GI F D A YF +N+SSPNT LR LQ L L+ + R+ A + P+L
Sbjct: 153 YVKGIHAFADCADYFTINISSPNTPALRDLQQPLALDDLVVRALAARDAEAERHGRKPVL 212
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD----- 158
VKIAPDL+L E LD++ I V V N + ++L+ QA++
Sbjct: 213 VKIAPDLTLSE--------LDAIVKITCARKVDGLIVSNTTLSRPSDLQDPQAREAGGLS 264
Query: 159 -------QLKHLLKTVVETRNQL 174
+ L +T V NQ
Sbjct: 265 GKPLFDLSTRMLAETFVRVENQF 287
>gi|119486600|ref|ZP_01620650.1| dihydroorotate dehydrogenase [Lyngbya sp. PCC 8106]
gi|119456217|gb|EAW37349.1| dihydroorotate dehydrogenase [Lyngbya sp. PCC 8106]
Length = 379
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 144/221 (65%), Gaps = 21/221 (9%)
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+D ++ L S + + GD YFVVNVSSPNT LR LQ +QL +L ++ + NQ A
Sbjct: 169 EDASNDYLGSFRDLKACGD---YFVVNVSSPNTPGLRSLQDAEQLSKILHSL-QQENQ-A 223
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDRYEYLDARY----- 229
KPL LVKIAPDL E + I D++ L ++ G+I +NTT+ R E L +
Sbjct: 224 KKPL---LVKIAPDL---EDEAIYDILELAKTYQLAGIIATNTTISR-EGLRTQTIAKTG 276
Query: 230 ---KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
EE GG+SG+PL+ +STE+I +++ T+G+LPIIGVGGVF+ DA+EKI AGASL+Q
Sbjct: 277 KSPTEEAGGISGKPLQKRSTEVIRLIWEKTQGQLPIIGVGGVFTADDAWEKITAGASLIQ 336
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT +VY GP ++ I + L + L+++G S+SQAVG HK
Sbjct: 337 VYTGWVYEGPGMIRNILTGLLQKLEEQGLESISQAVGLQHK 377
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT LR LQ +QL +L + ++ NQ A KPL LVKIAPDL + D
Sbjct: 188 YFVVNVSSPNTPGLRSLQDAEQLSKILHS-LQQENQ-AKKPL---LVKIAPDLEDEAIYD 242
Query: 118 IADVV 122
I ++
Sbjct: 243 ILELA 247
>gi|241202976|ref|YP_002974072.1| dihydroorotate dehydrogenase 2 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856866|gb|ACS54533.1| dihydroorotate dehydrogenase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 362
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQ ++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAAASGRTIPVFLKIAPDLTEEGMDDIAAEALSHG--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I L +LL +E S+
Sbjct: 316 YSCMVYEGPGLAGDIVRGLSKLLDREKAASI 346
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI +F VA YF N+SSPNT LR LQ ++ L LL V+ R+++A P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLAARDEMAAASGRTIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|156085655|ref|XP_001610237.1| dihydroorotate dehydrogenase [Babesia bovis]
gi|154797489|gb|EDO06669.1| dihydroorotate dehydrogenase [Babesia bovis]
Length = 415
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 140/229 (61%), Gaps = 18/229 (7%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL---KTVVETR 171
K D++ D+V + A Y +NVSSPNT NLR Q ++ L ++ ++ +E
Sbjct: 168 KNRTGDILADTVNAVKGVAPYADYIAINVSSPNTPNLRDNQKREPLIAVISAARSALEIV 227
Query: 172 N----------QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
N K +P +L+KI+PD+S E +DIAD+ L VDG+I +NTT+ R
Sbjct: 228 NTEIKSKGAEFNNTTKKVPLLLIKISPDVSRQELEDIADISLTHH--VDGIIATNTTITR 285
Query: 222 YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ + K GGLSG PL+ S +++ ++Y+LT+GK+PII GG+ + +DA E I
Sbjct: 286 DNVVPSDLKTAGNPKGGLSGRPLKTMSKKIVYDLYELTEGKIPIIACGGISTAQDALEMI 345
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+AGASL QIYT+ VY GP + +R+K+ L +LL K+GY +VS+A+GA H+
Sbjct: 346 EAGASLCQIYTALVYEGPGIPSRMKNGLADLLMKKGYLNVSEAIGAEHR 394
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLL---KTVVETRN----------QLALKPLPPI 102
A Y +NVSSPNT NLR Q ++ L ++ ++ +E N K +P +
Sbjct: 189 ADYIAINVSSPNTPNLRDNQKREPLIAVISAARSALEIVNTEIKSKGAEFNNTTKKVPLL 248
Query: 103 LVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
L+KI+PD+S E +DIAD+ L V GI+
Sbjct: 249 LIKISPDVSRQELEDIADISLTHHVDGII 277
>gi|116250343|ref|YP_766181.1| dihydroorotate dehydrogenase 2 [Rhizobium leguminosarum bv. viciae
3841]
gi|166215644|sp|Q1MLT8.1|PYRD_RHIL3 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|115254991|emb|CAK06065.1| putative dihydroorotate dehydrogenase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 362
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQ ++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++ P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEMGAASGRKIPVFLKIAPDLTEEGMDDIAAEALSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +ETGGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKETGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L + L +LL +E S+ +
Sbjct: 316 YSCMVYEGPGLAGDVVRGLSKLLDREKAASIRE 348
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQ ++ L LL V+ R+++ P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQGRESLAVLLSAVLAARDEMGAASGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|428320677|ref|YP_007118559.1| dihydroorotate oxidase A [Oscillatoria nigro-viridis PCC 7112]
gi|428244357|gb|AFZ10143.1| dihydroorotate oxidase A [Oscillatoria nigro-viridis PCC 7112]
Length = 387
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 17/211 (8%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L+S K + +GD YFVVNVSSPNT LR LQ L +L+ +++ N + + PI
Sbjct: 185 LESFKLLKDWGD---YFVVNVSSPNTPGLRSLQDAAGLSTILE-ILQQEN----RGIKPI 236
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR----YEYLDARYK---EETGG 235
LVKIAPDL + I D+ ++ G+I +NTT+ R + L K EE GG
Sbjct: 237 LVKIAPDLESEAIASILDIA--KTYQLAGIIATNTTIRRDGLKTQILRETGKPIAEEAGG 294
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
+SG P+R +STE+I +++ TKG+LPIIGVGG+F+ +DA+EKI AGASL+Q+YT +VY G
Sbjct: 295 ISGLPVRERSTEVIRFIWQYTKGELPIIGVGGIFTAEDAWEKIAAGASLIQVYTGWVYEG 354
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
P +V RI L + L+++G+NS+S+AVG+ +
Sbjct: 355 PWMVRRILQGLLQKLEEKGFNSISEAVGSEN 385
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ L +L+ +++ N + + PILVKIAPDL +
Sbjct: 193 DWGDYFVVNVSSPNTPGLRSLQDAAGLSTILE-ILQQEN----RGIKPILVKIAPDLESE 247
Query: 114 EKKDIADVV 122
I D+
Sbjct: 248 AIASILDIA 256
>gi|329849719|ref|ZP_08264565.1| dihydroorotate oxidase [Asticcacaulis biprosthecum C19]
gi|328841630|gb|EGF91200.1| dihydroorotate oxidase [Asticcacaulis biprosthecum C19]
Length = 351
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 130/216 (60%), Gaps = 5/216 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L++ KD AD + D V G+ + + YF +N+SSPNT LR LQ + L LL + E
Sbjct: 137 LNIGANKDAADRMADYVTGLKRLWGLGSYFTINISSPNTPGLRALQGRSHLDDLLGRIAE 196
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
TR LA PI +KIAPDL E +D LD ++GLIVSNTT+ R E L +
Sbjct: 197 TRRALAAATGQNMPIFLKIAPDLDDGEIEDTVSAALDHG--LEGLIVSNTTLSR-EGLRS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GG+SG+PL + ST + G+L +IG GG+ SG +A+ KI+AGASLVQ+
Sbjct: 254 SFASEAGGMSGKPLFDLSTRALKVAATAAAGRLVLIGAGGISSGAEAYAKIRAGASLVQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
Y++ VY GP L ++ +L L+ +G+ +VS+AVG
Sbjct: 314 YSALVYKGPGLADAVRLDLVARLKADGFATVSEAVG 349
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ G+ + + YF +N+SSPNT LR LQ + L LL + ETR LA PI
Sbjct: 152 YVTGLKRLWGLGSYFTINISSPNTPGLRALQGRSHLDDLLGRIAETRRALAAATGQNMPI 211
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
+KIAPDL E +D LD
Sbjct: 212 FLKIAPDLDDGEIEDTVSAALD 233
>gi|428203372|ref|YP_007081961.1| dihydroorotate dehydrogenase, subfamily 2 [Pleurocapsa sp. PCC
7327]
gi|427980804|gb|AFY78404.1| dihydroorotate dehydrogenase, subfamily 2 [Pleurocapsa sp. PCC
7327]
Length = 387
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 135/234 (57%), Gaps = 16/234 (6%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P + I +L + + + D V+ D A YFV NVSSPNT LR LQA +QL
Sbjct: 151 PRRIPIGINLCKSKITPLEEAAEDYVESFRYLRDWADYFVANVSSPNTPGLRSLQAGEQL 210
Query: 161 KHLLKTVV-ETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV 219
+ +L +V E R P+L+KI+PDL D I D L + G+I +NTT
Sbjct: 211 EPILAALVAENRGS------KPLLIKISPDLDGDAIATILD--LAKAYNLAGIIATNTTT 262
Query: 220 DR-------YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
R E K+E GG+SG P+R +STE+I ++ T+GKLPIIGVGG+F+
Sbjct: 263 RRDGLKTQILEATGKDIKDEAGGISGTPVRQRSTEIIRFIWHKTQGKLPIIGVGGIFTPD 322
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
DA+EKI AGASL+Q+YT ++Y GP +V RI L L+ +G+ +SQAVG+A
Sbjct: 323 DAWEKITAGASLLQVYTGWIYEGPWMVRRILEGLVTRLEAQGFTHLSQAVGSAE 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV-ETRNQLALKPLPPILVKIAPDLSL 112
D A YFV NVSSPNT LR LQA +QL+ +L +V E R P+L+KI+PDL
Sbjct: 184 DWADYFVANVSSPNTPGLRSLQAGEQLEPILAALVAENRGS------KPLLIKISPDLDG 237
Query: 113 DEKKDIADVV 122
D I D+
Sbjct: 238 DAIATILDLA 247
>gi|428777492|ref|YP_007169279.1| dihydroorotate oxidase A [Halothece sp. PCC 7418]
gi|428691771|gb|AFZ45065.1| dihydroorotate oxidase A [Halothece sp. PCC 7418]
Length = 381
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 136/218 (62%), Gaps = 16/218 (7%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
+ + D L+ D YFVVNVSSPNT LR LQ QL +L+ + Q
Sbjct: 165 LEEAASDYRTSFLRLRDWGDYFVVNVSSPNTPGLRSLQDSAQLSLILEAI-----QSNNP 219
Query: 178 PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY-------- 229
PILVKIAPDL+ D +++ + + ++ ++ G+I +NTT+ R E L +
Sbjct: 220 DQKPILVKIAPDLTWDAIREV--LTIATQYQLAGMIATNTTIAR-EGLKTKVLAKTGKPV 276
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EE GGLSG+PLR+++TE+I +Y T+GKLPIIGVGG+F+ +DA+EKI AGA+L+Q+YT
Sbjct: 277 TEEAGGLSGKPLRDRATEIIRFIYDETEGKLPIIGVGGIFTAEDAWEKITAGATLLQVYT 336
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
++Y GP + R+ + L + L + G S+S AVG +H+
Sbjct: 337 GWIYEGPLMPRRVMAGLTQKLDEHGLLSLSDAVGLSHR 374
>gi|428225973|ref|YP_007110070.1| dihydroorotate oxidase A [Geitlerinema sp. PCC 7407]
gi|427985874|gb|AFY67018.1| dihydroorotate oxidase A [Geitlerinema sp. PCC 7407]
Length = 378
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 19/211 (9%)
Query: 125 SVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILV 184
S + + + GD YFVVNVSSPNT LR LQA DQL +L+ + Q A P+LV
Sbjct: 178 SFRQLQELGD---YFVVNVSSPNTPGLRSLQATDQLAPILEAL-----QQANTTRKPLLV 229
Query: 185 KIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGL 236
KIAPDL E + IADV+ L + ++ G+I +NTT+ R E EE GG+
Sbjct: 230 KIAPDL---EWEAIADVIALAQRYQLAGIIATNTTIRRDNLRTQIIEQTGNPVTEEAGGI 286
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG P+R +STE+I +Y+ T+G LPIIGVGG+F+ +DA+ KI AGA+L+Q+YT ++Y GP
Sbjct: 287 SGAPVRQRSTEVIRFIYQQTQGSLPIIGVGGIFTAEDAWAKITAGATLIQVYTGWIYEGP 346
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+V RI L L G + +AVG H+
Sbjct: 347 WMVRRILEGLVRQLDAHGLTHLHEAVGLDHR 377
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQA DQL +L+ + Q A P+LVKIAPDL
Sbjct: 184 ELGDYFVVNVSSPNTPGLRSLQATDQLAPILEAL-----QQANTTRKPLLVKIAPDL--- 235
Query: 114 EKKDIADVV 122
E + IADV+
Sbjct: 236 EWEAIADVI 244
>gi|428772940|ref|YP_007164728.1| dihydroorotate oxidase A [Cyanobacterium stanieri PCC 7202]
gi|428687219|gb|AFZ47079.1| dihydroorotate oxidase A [Cyanobacterium stanieri PCC 7202]
Length = 376
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 133/196 (67%), Gaps = 16/196 (8%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFV+NVSSPNT LR LQ +QL+ +L+T+ E A + PIL+KIAPDLS D+
Sbjct: 186 ADYFVINVSSPNTPGLRSLQGGEQLEPILRTLQE-----ANQGEKPILIKIAPDLSWDDI 240
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG--------GLSGEPLRNKSTE 247
K I D L + G++ +NTT+ + E L+ + +ETG G+SG PL+ +STE
Sbjct: 241 KGILD--LSRNYDLSGIVATNTTIKK-EQLETKILKETGNLLVDEAGGISGLPLKQRSTE 297
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+I +Y+ TKG+LPIIGVGG+F+ +DA+EKI AGA+L+Q Y+ +VY GP V I + L+
Sbjct: 298 VIRFIYQQTKGELPIIGVGGIFNAQDAWEKITAGATLLQFYSGWVYEGPWAVRDILTGLQ 357
Query: 308 ELLQKEGYNSVSQAVG 323
LQ++G +++S+A+G
Sbjct: 358 TRLQQKGLSNISEAIG 373
>gi|169849353|ref|XP_001831380.1| dihydroorotate dehydrogenase [Coprinopsis cinerea okayama7#130]
gi|116507648|gb|EAU90543.1| dihydroorotate dehydrogenase [Coprinopsis cinerea okayama7#130]
Length = 499
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 132/204 (64%), Gaps = 6/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ AD + D VKG+ FG + V+NVSSPNT LR LQ +D L+ LL+ V + R+ L
Sbjct: 222 KESPADSIDDFVKGVNTFGPYSDVLVINVSSPNTPGLRGLQNRDSLEELLQGVTKARDAL 281
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
A P+ P +L+K+APDL+ + +IA+V+ SK +DG+IVSNTT+ R ++L K
Sbjct: 282 APSPITSKRPKLLLKLAPDLNESQLVEIAEVIRQSK--IDGVIVSNTTIQRPKHLINASK 339
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+E GGLSG P++ S + + + +P+IG GG+++GKDA + KAGASLVQ+YTS
Sbjct: 340 QEAGGLSGPPVKPYSLLALKTLREQLPASIPLIGCGGIWTGKDALDFAKAGASLVQLYTS 399
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y G RIK EL E L+KEG
Sbjct: 400 FGYDGVGTPRRIKDELVEELKKEG 423
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----PPIL 103
G+ FG + V+NVSSPNT LR LQ +D L+ LL+ V + R+ LA P+ P +L
Sbjct: 235 GVNTFGPYSDVLVINVSSPNTPGLRGLQNRDSLEELLQGVTKARDALAPSPITSKRPKLL 294
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+K+APDL+ + +IA+V+ S + G++
Sbjct: 295 LKLAPDLNESQLVEIAEVIRQSKIDGVI 322
>gi|407787480|ref|ZP_11134621.1| dihydroorotate dehydrogenase 2 [Celeribacter baekdonensis B30]
gi|407199758|gb|EKE69773.1| dihydroorotate dehydrogenase 2 [Celeribacter baekdonensis B30]
Length = 357
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
KI L+L KD D D K + G+ + VNVSSPNT LR LQ + L+ L
Sbjct: 136 AKIPVGLNLGANKDSEDRAGDFAKVLTHCGNAIDFATVNVSSPNTERLRDLQGPEALEAL 195
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
L+ V+E R L K P+ +KIAPDL E ++A+V K +D +I +NTT+ R E
Sbjct: 196 LRGVLEARTDLDHKV--PVFLKIAPDLEASELAELAEVA--RKSGIDAVIATNTTLSR-E 250
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
L + +K+E GGLSG PL KST +++++ + +P+IGVGG+ S DA+ KI+AGAS
Sbjct: 251 GLKSAHKDEMGGLSGRPLFEKSTRVLAQLSRDLGDDMPLIGVGGIASALDAYTKIRAGAS 310
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+VQ+Y++ VY G L RI L++LL+++G+++V++AVG
Sbjct: 311 VVQLYSAMVYQGLSLAPRIARGLDDLLKQDGFDTVAEAVG 350
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G+ + VNVSSPNT LR LQ + L+ LL+ V+E R L K P+ +KIAPDL
Sbjct: 165 GNAIDFATVNVSSPNTERLRDLQGPEALEALLRGVLEARTDLDHK--VPVFLKIAPDLEA 222
Query: 113 DEKKDIADVVLDS 125
E ++A+V S
Sbjct: 223 SELAELAEVARKS 235
>gi|113475667|ref|YP_721728.1| dihydroorotate dehydrogenase 2 [Trichodesmium erythraeum IMS101]
gi|123160908|sp|Q113R9.1|PYRD_TRIEI RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|110166715|gb|ABG51255.1| dihydroorotate oxidase A [Trichodesmium erythraeum IMS101]
Length = 378
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 139/213 (65%), Gaps = 19/213 (8%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L+S + + GD YFVVNVSSPNT LR LQ D L +L+ V+ N+ PI
Sbjct: 177 LESFRLLKNCGD---YFVVNVSSPNTPGLRSLQNTDSLSKILE-VLPRENERK----KPI 228
Query: 183 LVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR----YEYLDARYK---EETG 234
LVKIAPDL E + IA ++ L + K+ G+I +NTT++R + L A K EE G
Sbjct: 229 LVKIAPDL---ENEAIAAIIDLIKEYKISGIIATNTTINREKLTTKILPATGKPIIEEAG 285
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
G+SG+PL +STE+I +++ TKGKLPIIGVGG+F+ +DA+ KI AGASL+QIYT VY
Sbjct: 286 GISGKPLTKRSTEIIKFIWQETKGKLPIIGVGGIFTSEDAWNKITAGASLIQIYTGLVYQ 345
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
GP +V +I L + L + G NS+S+AVG A+K
Sbjct: 346 GPGIVKQILQGLLKKLDEHGLNSISEAVGLANK 378
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
+ YFVVNVSSPNT LR LQ D L +L+ V+ N+ PILVKIAPDL
Sbjct: 185 NCGDYFVVNVSSPNTPGLRSLQNTDSLSKILE-VLPRENERK----KPILVKIAPDL--- 236
Query: 114 EKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ 173
E + IA ++D +K Y + + + NT R+ L K ++E
Sbjct: 237 ENEAIA-AIIDLIK---------EYKISGIIATNTTINREKLTTKILPATGKPIIEEAGG 286
Query: 174 LAVKPL 179
++ KPL
Sbjct: 287 ISGKPL 292
>gi|56416554|ref|YP_153628.1| dihydroorotate dehydrogenase 2 [Anaplasma marginale str. St.
Maries]
gi|222474922|ref|YP_002563337.1| dihydroorotate dehydrogenase [Anaplasma marginale str. Florida]
gi|56387786|gb|AAV86373.1| dihydroorotate dehydrogenase [Anaplasma marginale str. St. Maries]
gi|222419058|gb|ACM49081.1| dihydroorotate dehydrogenase (pyrD) [Anaplasma marginale str.
Florida]
Length = 389
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 198 LSSYITINVSSPNTAGLRDLQNRGPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 257
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET-GGLSGEPLRNKSTELISEMY 253
K+DIA+ ++ K K+ GLIVSNTT D R K T GGLSG PL + ST ++SEMY
Sbjct: 258 KQDIAEEIV--KHKISGLIVSNTTTDLSLLGKDRNKSITQGGLSGRPLFDLSTTVLSEMY 315
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
L + K+ +IG GGV SG A +KIKAGASLVQ+YT+ VY G +V +I EL ELL +E
Sbjct: 316 SLLRDKVILIGCGGVSSGAQALQKIKAGASLVQLYTALVYEGFGVVKKINMELAELLTQE 375
Query: 314 GYNSVSQAVG 323
G++ V QAVG
Sbjct: 376 GFSKVEQAVG 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 198 LSSYITINVSSPNTAGLRDLQNRGPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 257
Query: 115 KKDIA-DVVLDSVKGIL 130
K+DIA ++V + G++
Sbjct: 258 KQDIAEEIVKHKISGLI 274
>gi|254994773|ref|ZP_05276963.1| dihydroorotate dehydrogenase 2 [Anaplasma marginale str.
Mississippi]
Length = 356
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 165 LSSYITINVSSPNTAGLRDLQNRGPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 224
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET-GGLSGEPLRNKSTELISEMY 253
K+DIA+ ++ K K+ GLIVSNTT D R K T GGLSG PL + ST ++SEMY
Sbjct: 225 KQDIAEEIV--KHKISGLIVSNTTTDLSLLGKDRNKSITQGGLSGRPLFDLSTTVLSEMY 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
L + K+ +IG GGV SG A +KIKAGASLVQ+YT+ VY G +V +I EL ELL +E
Sbjct: 283 SLLRDKVILIGCGGVSSGAQALQKIKAGASLVQLYTALVYEGFGVVKKINMELAELLTQE 342
Query: 314 GYNSVSQAVG 323
G++ V QAVG
Sbjct: 343 GFSKVEQAVG 352
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 165 LSSYITINVSSPNTAGLRDLQNRGPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 224
Query: 115 KKDIA-DVVLDSVKGIL 130
K+DIA ++V + G++
Sbjct: 225 KQDIAEEIVKHKISGLI 241
>gi|118589340|ref|ZP_01546746.1| dihydroorotate dehydrogenase [Stappia aggregata IAM 12614]
gi|118438040|gb|EAV44675.1| dihydroorotate dehydrogenase [Labrenzia aggregata IAM 12614]
Length = 364
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 133/216 (61%), Gaps = 8/216 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F D+A YF VN+SSPNT LR LQA+ L LL V+
Sbjct: 140 INVGANKDAADRIADYVAGITAFADLASYFTVNISSPNTPGLRDLQARSALADLLTAVIT 199
Query: 170 TRN----QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
R+ +L K P+L+KIAPD++ ++ +DI + VL KVDGLIVSNTT+ R
Sbjct: 200 ARDASTQKLGRKV--PVLLKIAPDVADEDLRDIVEEVL--AKKVDGLIVSNTTIGREGLS 255
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ETGGLSG+PL KST +++ KL LPIIGVGG+ S + A+ KI AGA L+
Sbjct: 256 GKGPAQETGGLSGKPLFRKSTIMLARARKLAGPDLPIIGVGGIDSAETAWTKITAGADLL 315
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQA 321
Q+Y++ V+ G L+ I S L L + G S+ +A
Sbjct: 316 QLYSALVFKGAGLIDEILSGLSAKLDQHGLASLREA 351
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F D+A YF VN+SSPNT LR LQA+ L LL V+ R+ L P+
Sbjct: 155 YVAGITAFADLASYFTVNISSPNTPGLRDLQARSALADLLTAVITARDASTQKLGRKVPV 214
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
L+KIAPD++ ++ +DI + VL
Sbjct: 215 LLKIAPDVADEDLRDIVEEVL 235
>gi|325104218|ref|YP_004273872.1| dihydroorotate dehydrogenase [Pedobacter saltans DSM 12145]
gi|324973066|gb|ADY52050.1| dihydroorotate dehydrogenase [Pedobacter saltans DSM 12145]
Length = 340
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D +K + +V YFVVNVSSPNT NLR LQ K+ LK++L T+ E N+ +
Sbjct: 155 EAVSDYIKCFDRLFNVVDYFVVNVSSPNTPNLRALQEKEPLKNILNTLQERNNKDGISK- 213
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY-KEETGGLSG 238
PIL+KIAPDL+ + DI ++V ++K + G+I +NTT+ R Y K ETGGLSG
Sbjct: 214 -PILLKIAPDLTDSQLDDIVEIVQETK--IAGVIATNTTISRENLNSPEYLKNETGGLSG 270
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+P++++STE+I + + + PIIGVGG+ S KDA EK+ AGA+LVQIYT F+Y GP L
Sbjct: 271 KPVKDRSTEVIRYLSEKSNKAFPIIGVGGIHSAKDAKEKLDAGAALVQIYTGFIYEGPAL 330
Query: 299 VTRIKSELE 307
+ RI L+
Sbjct: 331 IKRINKSLK 339
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
+V YFVVNVSSPNT NLR LQ K+ LK++L T+ E N+ + PIL+KIAPDL+
Sbjct: 169 NVVDYFVVNVSSPNTPNLRALQEKEPLKNILNTLQERNNKDGIS--KPILLKIAPDLTDS 226
Query: 114 EKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSP-----NTANLRKLQAKDQLKHLLKTV 167
+ DI ++V ++ + G++ N++SP T L KD+ +++ +
Sbjct: 227 QLDDIVEIVQETKIAGVIATNTTISR--ENLNSPEYLKNETGGLSGKPVKDRSTEVIRYL 284
Query: 168 VETRNQ 173
E N+
Sbjct: 285 SEKSNK 290
>gi|260425537|ref|ZP_05779517.1| dihydroorotate oxidase [Citreicella sp. SE45]
gi|260423477|gb|EEX16727.1| dihydroorotate oxidase [Citreicella sp. SE45]
Length = 352
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 138/218 (63%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD +D D + + + G+ + VNVSSPNT LR LQ KD L LL V++
Sbjct: 137 LNLGANKDSSDRAADFAQVLSRCGEELDFATVNVSSPNTERLRDLQGKDALAGLLAGVMQ 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R L P+P + +KIAPDL D+A+V L S V G+I +NTT+ R E L +
Sbjct: 197 ARAALE-HPIP-VFLKIAPDLDEAGLADVAEVALSSG--VSGVIATNTTLSR-EGLVSPL 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+++ GG+SG PL KST +++ + LT+GKLP+IGVGGV + + A+ KI+AGAS VQ+YT
Sbjct: 252 RDQAGGVSGAPLFEKSTRVLARLSVLTEGKLPLIGVGGVSNAEQAYAKIRAGASAVQVYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY G LV I + L+ LL ++G+ +V++AVG +
Sbjct: 312 ALVYGGMSLVPEIVTGLDALLARDGFANVAEAVGTGRE 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ G+ + VNVSSPNT LR LQ KD L LL V++ R L P+ P+ +KIAPDL
Sbjct: 158 RCGEELDFATVNVSSPNTERLRDLQGKDALAGLLAGVMQARAALE-HPI-PVFLKIAPDL 215
Query: 111 SLDEKKDIADVVLDS-VKGIL 130
D+A+V L S V G++
Sbjct: 216 DEAGLADVAEVALSSGVSGVI 236
>gi|92116176|ref|YP_575905.1| dihydroorotate dehydrogenase 2 [Nitrobacter hamburgensis X14]
gi|91799070|gb|ABE61445.1| dihydroorotate oxidase A [Nitrobacter hamburgensis X14]
Length = 364
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 131/217 (60%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + V D V+ I F VA YF VNVSSPNT LR LQ D L LL V++
Sbjct: 138 VNVGANKDSGNRVADYVRLIEIFAPVASYFTVNVSSPNTPALRNLQQADALNELLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DA 227
R ++ P+L+KIAPDL+L E D+ + ++DG+IV NTT+ R L D
Sbjct: 198 ARERVRQNAGDTPVLLKIAPDLTLAELDDVVHIA--RSRRIDGMIVGNTTLARPSSLRDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+E GGLSG PL ST +++E Y T+G P++G GG+ SG A KI+AGA+L+Q+
Sbjct: 256 SRAKEQGGLSGRPLFRLSTRMVAETYVRTEGAFPLVGAGGIDSGGAALTKIRAGATLIQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y+S VY G LV IK +L L + G++S+S VGA
Sbjct: 316 YSSLVYKGLGLVDDIKRDLMSTLLRTGHDSLSDIVGA 352
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIAPDL 110
F VA YF VNVSSPNT LR LQ D L LL V++ R ++ P+L+KIAPDL
Sbjct: 160 FAPVASYFTVNVSSPNTPALRNLQQADALNELLARVIDARERVRQNAGDTPVLLKIAPDL 219
Query: 111 SLDEKKDIADVV 122
+L E D+ +
Sbjct: 220 TLAELDDVVHIA 231
>gi|388854538|emb|CCF51925.1| related to dihydroorotate dehydrogenase, mitochondrial precursor
[Ustilago hordei]
Length = 663
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 131/209 (62%), Gaps = 11/209 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ + V D +KG+ + G A +VNVSSPNT LR+LQ +D L+ LL VV R+ +
Sbjct: 290 KESPEESVQDYIKGVQRLGPYADMIIVNVSSPNTPGLRRLQRRDVLQDLLTKVVNARDGM 349
Query: 175 AVKPLP--------PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
L P+LVKIAPDLS +E +D+AD L K +DGL++SNTT+ R L
Sbjct: 350 EQSHLGFSNKKVSVPLLVKIAPDLSEEELQDVADAAL--KSGIDGLVISNTTISRPATLR 407
Query: 227 ARYK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG PL+ + + ++ + + +GKLPIIG GG+ SG+DA + KAGAS +
Sbjct: 408 SSENVRETGGLSGPPLKPLALKALTIVNQRLQGKLPIIGCGGIASGQDALDYAKAGASAI 467
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEG 314
++YTSF Y G L RIK EL ELL+ +G
Sbjct: 468 ELYTSFGYQGVGLPRRIKDELVELLKAQG 496
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP- 100
+Q ++ G+ + G A +VNVSSPNT LR+LQ +D L+ LL VV R+ + L
Sbjct: 297 VQDYIKGVQRLGPYADMIIVNVSSPNTPGLRRLQRRDVLQDLLTKVVNARDGMEQSHLGF 356
Query: 101 -------PILVKIAPDLSLDEKKDIADVVLDS 125
P+LVKIAPDLS +E +D+AD L S
Sbjct: 357 SNKKVSVPLLVKIAPDLSEEELQDVADAALKS 388
>gi|429209013|ref|ZP_19200254.1| Dihydroorotate dehydrogenase [Rhodobacter sp. AKP1]
gi|428188080|gb|EKX56651.1| Dihydroorotate dehydrogenase [Rhodobacter sp. AKP1]
Length = 354
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 145/231 (62%), Gaps = 9/231 (3%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P + V L+L KD D D + G A + VNVSSPNT LR
Sbjct: 125 RLAMRPRGAVPV----GLNLGANKDSPDRAADFAAVLAACGPHADFATVNVSSPNTERLR 180
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LL+ V++ + A +P+P + +KIAPDLS + +IA+V L S + G+
Sbjct: 181 DLQGRQALTALLEGVMQVQAGFA-RPVP-VFLKIAPDLSEADLAEIAEVALASG--IAGI 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
+ +NTT+ R + L + + E GGLSG PL +ST +++ + +LT+G+LP+IGVGGV S +
Sbjct: 237 VATNTTLAR-DGLRSAHAREAGGLSGAPLFERSTRVLARLSELTEGRLPLIGVGGVASAE 295
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+A+ KI+AGAS VQ+YT+ VY G L RI L+ LL ++G+ SV++AVG
Sbjct: 296 EAYAKIRAGASAVQLYTAMVYQGIGLAARIARGLDALLLRDGFGSVAEAVG 346
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G A + VNVSSPNT LR LQ + L LL+ V++ + A +P+ P+ +KIAPDLS
Sbjct: 161 GPHADFATVNVSSPNTERLRDLQGRQALTALLEGVMQVQAGFA-RPV-PVFLKIAPDLSE 218
Query: 113 DEKKDIADVVLDS-VKGIL 130
+ +IA+V L S + GI+
Sbjct: 219 ADLAEIAEVALASGIAGIV 237
>gi|237808302|ref|YP_002892742.1| dihydroorotate dehydrogenase 2 [Tolumonas auensis DSM 9187]
gi|237500563|gb|ACQ93156.1| dihydroorotate dehydrogenase [Tolumonas auensis DSM 9187]
Length = 337
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 126/196 (64%), Gaps = 10/196 (5%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
D ++ KD + +D V A Y VN+SSPNT NLR+LQ + L LLK +
Sbjct: 146 DTPIENGKDDYLICMDKVYA------YAGYIAVNISSPNTPNLRQLQYGEALDDLLKALK 199
Query: 169 ETRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
E + +LA K P+ VKIAPDLS +E K +A+ +L + +DG+I +NTT+DR D
Sbjct: 200 ERQKELAAKHNKYVPVAVKIAPDLSQEELKQVAESLL--RYGIDGVIATNTTLDRELIHD 257
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ ETGGLSG PL+NKSTE+I +++ KG++PIIGVGG+ S A EK++AGA LVQ
Sbjct: 258 MPHAAETGGLSGRPLQNKSTEIIRSLHEYLKGQIPIIGVGGIDSAMAAREKMQAGAQLVQ 317
Query: 287 IYTSFVYHGPPLVTRI 302
IY+ F+YHGP LV I
Sbjct: 318 IYSGFIYHGPDLVKNI 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT NLR+LQ + L LLK + E + +LA K P+
Sbjct: 156 YLICMDKVYAYAGYIAVNISSPNTPNLRQLQYGEALDDLLKALKERQKELAAKHNKYVPV 215
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDLS +E K +A+ +L
Sbjct: 216 AVKIAPDLSQEELKQVAESLL 236
>gi|420242142|ref|ZP_14746216.1| dihydroorotate dehydrogenase, subfamily 2, partial [Rhizobium sp.
CF080]
gi|398068431|gb|EJL59858.1| dihydroorotate dehydrogenase, subfamily 2, partial [Rhizobium sp.
CF080]
Length = 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD V D V GI KF +A YF VN+SSPNT LR LQA+D LK LL+ V+
Sbjct: 100 VNIGANKDAADRVADYVAGIAKFYALATYFTVNISSPNTPGLRDLQARDSLKALLEAVLA 159
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + ++ P+ +KIAPDL+ + DIA + +DGLIVSNTT+ R D
Sbjct: 160 ARAEETLRHGRTVPVFLKIAPDLTEEGLDDIAAEA--TSHPLDGLIVSNTTLARDGLKDQ 217
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+E GGLSG PL +ST +++++ K L +IGVGGV S DA EKI+AGA LVQ+
Sbjct: 218 VQAKEAGGLSGAPLFRRSTAVLAKVRKRVGPDLAVIGVGGVSSAADALEKIRAGADLVQL 277
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L ELL +E +S+ +
Sbjct: 278 YSCMVYEGPGLPAAIVQGLSELLDREKVSSIHE 310
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
++ GI KF +A YF VN+SSPNT LR LQA+D LK LL+ V+ R + L+ P+
Sbjct: 115 YVAGIAKFYALATYFTVNISSPNTPGLRDLQARDSLKALLEAVLAARAEETLRHGRTVPV 174
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 175 FLKIAPDLTEEGLDDIA 191
>gi|255002895|ref|ZP_05277859.1| dihydroorotate dehydrogenase 2 [Anaplasma marginale str. Puerto
Rico]
gi|255004026|ref|ZP_05278827.1| dihydroorotate dehydrogenase 2 [Anaplasma marginale str. Virginia]
Length = 383
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 192 LSSYITINVSSPNTAGLRDLQNRGPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 251
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET-GGLSGEPLRNKSTELISEMY 253
K+DIA+ ++ K K+ GLIVSNTT D R K T GGLSG PL + ST ++SEMY
Sbjct: 252 KQDIAEEIV--KHKISGLIVSNTTTDLSLLGKDRNKSITQGGLSGRPLFDLSTTVLSEMY 309
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
L + K+ +IG GGV SG A +KIKAGASLVQ+YT+ VY G +V +I EL ELL +E
Sbjct: 310 SLLRDKVILIGCGGVSSGAQALQKIKAGASLVQLYTALVYEGFGVVKKINMELAELLTQE 369
Query: 314 GYNSVSQAVG 323
G++ V QAVG
Sbjct: 370 GFSKVEQAVG 379
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 192 LSSYITINVSSPNTAGLRDLQNRGPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 251
Query: 115 KKDIA-DVVLDSVKGIL 130
K+DIA ++V + G++
Sbjct: 252 KQDIAEEIVKHKISGLI 268
>gi|39933874|ref|NP_946150.1| dihydroorotate dehydrogenase 2 [Rhodopseudomonas palustris CGA009]
gi|81829745|sp|Q6NBN1.1|PYRD_RHOPA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|39647721|emb|CAE26241.1| dihydroorotate dehydrogenase [Rhodopseudomonas palustris CGA009]
Length = 364
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D VK I F +A YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSDDRVADYVKLIETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVID 197
Query: 170 TRNQL-AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R ++ A P+L+KIAPDLSL E D+ + +VDG+IV+NTT+ R L R
Sbjct: 198 ARERVRAAAGDTPVLLKIAPDLSLGELDDVVHIA--RSRRVDGMIVANTTLSRSPTLRER 255
Query: 229 YK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K E GGLSG PL ST +++E + +G P+IGVGG+ SG A KI+AGA+LVQ+
Sbjct: 256 TKMNEQGGLSGRPLFRLSTRMVAETFVRAEGAFPLIGVGGIDSGGAALTKIRAGATLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y++ VY G LV IK++L L + +S+++ VGA
Sbjct: 316 YSALVYKGLGLVESIKADLASTLLRTDRDSLAEIVGA 352
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKPLPPILVKIA 107
I F +A YF VNVSSPNT LR LQ L LL V++ R ++ A P+L+KIA
Sbjct: 157 IETFAPLASYFTVNVSSPNTPGLRNLQQAAALDDLLARVIDARERVRAAAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADV 121
PDLSL E D+ +
Sbjct: 217 PDLSLGELDDVVHI 230
>gi|300865455|ref|ZP_07110249.1| Dihydroorotate dehydrogenase (fragment) [Oscillatoria sp. PCC 6506]
gi|300336547|emb|CBN55399.1| Dihydroorotate dehydrogenase (fragment) [Oscillatoria sp. PCC 6506]
Length = 213
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 134/209 (64%), Gaps = 19/209 (9%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L S K + +GD YFVVNVSSPNT LR LQ DQL +L+ + Q + L PI
Sbjct: 12 LGSFKLLKDWGD---YFVVNVSSPNTPGLRSLQDADQLSTILEGL-----QQENRALKPI 63
Query: 183 LVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETG 234
LVKIAPDL E + IA V+ L ++ G++ +NTT+ R EE G
Sbjct: 64 LVKIAPDL---EWEAIASVIKLAQTYELAGIVATNTTIRRDGLKTQILPQTGKHISEEAG 120
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
G+SG P+R++STE+I +++ T+G+LPIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y
Sbjct: 121 GISGTPVRDRSTEVIRFIWQQTQGQLPIIGVGGIFTAEDAWEKIAAGASLIQVYTGWIYE 180
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GP +V RI L + L++ G + +S+A+G
Sbjct: 181 GPWMVRRILEGLLQKLEERGLSCISEAIG 209
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ DQL +L+ + Q + L PILVKIAPDL
Sbjct: 20 DWGDYFVVNVSSPNTPGLRSLQDADQLSTILEGL-----QQENRALKPILVKIAPDL--- 71
Query: 114 EKKDIADVV 122
E + IA V+
Sbjct: 72 EWEAIASVI 80
>gi|254476398|ref|ZP_05089784.1| dihydroorotate oxidase [Ruegeria sp. R11]
gi|214030641|gb|EEB71476.1| dihydroorotate oxidase [Ruegeria sp. R11]
Length = 352
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 134/215 (62%), Gaps = 5/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D K + G + VNVSSPNT LR LQ K L LL V+
Sbjct: 137 LNLGANKDSEDRSADFAKVLAHCGAHLDFATVNVSSPNTEKLRDLQGKAALSALLNGVIA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR ++A + P+ +KIAPDL +DIA+V ++ C +D +I +NTT+ R + L + +
Sbjct: 197 TREEMATRV--PVFLKIAPDLDRAGIEDIAEVAVE--CGIDAVIATNTTLAR-DGLQSAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++E GGLSG PL KST +++++ +L G++P+IGVGG+ + + A+ KI AGAS VQ YT
Sbjct: 252 RDEAGGLSGAPLFEKSTRVLAQLSELLDGRVPLIGVGGISNAEQAYAKICAGASAVQFYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G L I L+ LL ++G+ +V+QAVG+
Sbjct: 312 AMVYGGLSLAGEIARGLDALLARDGFGNVAQAVGS 346
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ TR ++A + P+ +KIAPDL +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALSALLNGVIATREEMATR--VPVFLKIAPDLDRAGIED 222
Query: 118 IADVVLD 124
IA+V ++
Sbjct: 223 IAEVAVE 229
>gi|359789860|ref|ZP_09292789.1| dihydroorotate dehydrogenase 2 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254224|gb|EHK57255.1| dihydroorotate dehydrogenase 2 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 362
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ +F A Y VN+SSPNT LR +QA+ +L LL +
Sbjct: 138 VNIGANKDSADRIADYELGVKRFARHASYLTVNISSPNTPGLRNMQARAELAELLSRITA 197
Query: 170 TRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R L P+ +KIAPDL+ E +DIA V D VDG+IVSNTT+ R +
Sbjct: 198 ARAALPDGAGRKTPLFLKIAPDLAEAELQDIAAEVADKA--VDGVIVSNTTISRPNLQPS 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG+PL +ST ++++M +L L +IGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 AFLGEAGGLSGKPLFERSTTVLAKMRRLVGPDLALIGVGGVDSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YT +Y GP L RI SE+ ++EG +S++
Sbjct: 316 YTGMIYAGPALPGRIVSEMARFAEREGLSSITS 348
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 11 RILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTAN 70
R+ +R R G G N S A + + LG+ +F A Y VN+SSPNT
Sbjct: 125 RLAARAGRPGVVGVNIGANKDS------ADRIADYELGVKRFARHASYLTVNISSPNTPG 178
Query: 71 LRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPILVKIAPDLSLDEKKDIADVVLD-SVK 127
LR +QA+ +L LL + R L P+ +KIAPDL+ E +DIA V D +V
Sbjct: 179 LRNMQARAELAELLSRITAARAALPDGAGRKTPLFLKIAPDLAEAELQDIAAEVADKAVD 238
Query: 128 GIL 130
G++
Sbjct: 239 GVI 241
>gi|332559429|ref|ZP_08413751.1| dihydroorotate dehydrogenase 2 [Rhodobacter sphaeroides WS8N]
gi|332277141|gb|EGJ22456.1| dihydroorotate dehydrogenase 2 [Rhodobacter sphaeroides WS8N]
Length = 354
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 145/231 (62%), Gaps = 9/231 (3%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P + V L+L KD D D + G A + VNVSSPNT LR
Sbjct: 125 RLAMRPRGAVPV----GLNLGANKDSPDRAADFAAVLAACGPHADFATVNVSSPNTERLR 180
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LL+ V++ + A +P+P + +KIAPDLS + +IA+V L S + G+
Sbjct: 181 DLQGRQALTALLEGVMQVQAGFA-RPVP-VFLKIAPDLSDADLAEIAEVALASG--IAGI 236
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
+ +NTT+ R + L + + E GGLSG PL +ST +++ + +LT+G+LP+IGVGGV S +
Sbjct: 237 VATNTTLAR-DGLRSAHAREAGGLSGAPLFERSTRVLARLSELTEGRLPLIGVGGVASAE 295
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+A+ KI+AGAS VQ+YT+ VY G L RI L+ LL ++G+ SV++AVG
Sbjct: 296 EAYAKIRAGASAVQLYTAMVYQGIGLAARIARGLDALLLRDGFGSVAEAVG 346
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G A + VNVSSPNT LR LQ + L LL+ V++ + A +P+ P+ +KIAPDLS
Sbjct: 161 GPHADFATVNVSSPNTERLRDLQGRQALTALLEGVMQVQAGFA-RPV-PVFLKIAPDLSD 218
Query: 113 DEKKDIADVVLDS-VKGIL 130
+ +IA+V L S + GI+
Sbjct: 219 ADLAEIAEVALASGIAGIV 237
>gi|51701775|sp|Q6V3W9.1|PYRD_LACK1 RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOD; Short=DHODase;
Short=DHOdehase; AltName: Full=Dihydroorotate oxidase;
Flags: Precursor
gi|33317311|gb|AAQ04682.1|AF452108_1 mitochondrial dihydroorotate dehydrogenase [Lachancea kluyveri]
gi|34099825|gb|AAQ57201.1| dihydroorotate dehydrogenase 2 [Lachancea kluyveri]
Length = 446
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 14/212 (6%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D +KG+ KF A V+NVSSPNT LR LQ + +L LL +V+ RN L
Sbjct: 225 KNKTGDEVKDYLKGVEKFQSHADVLVINVSSPNTPGLRDLQNESKLTDLLSQIVQKRNSL 284
Query: 175 --------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL- 225
A PP+LVKIAPDL+ E + IA V K KVDG+IVSNTT+ R + L
Sbjct: 285 IQNGNVLGAKTHKPPVLVKIAPDLTEPELESIA--VAAKKSKVDGIIVSNTTIQRPDSLV 342
Query: 226 --DARYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGA 282
D K +TGGLSG+PL+ + + + +YK TK +L ++G GG+ SG+DA E KAGA
Sbjct: 343 TRDEALKSQTGGLSGKPLKPFALKALKTVYKYTKDSELVLVGCGGISSGQDAIEFAKAGA 402
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
+ VQ+YTS+ Y GP L+ IK E+ E L+KEG
Sbjct: 403 TFVQLYTSYAYKGPGLIAHIKDEVTEELKKEG 434
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--------AL 96
+L G+ KF A V+NVSSPNT LR LQ + +L LL +V+ RN L A
Sbjct: 235 YLKGVEKFQSHADVLVINVSSPNTPGLRDLQNESKLTDLLSQIVQKRNSLIQNGNVLGAK 294
Query: 97 KPLPPILVKIAPDLSLDEKKDIA 119
PP+LVKIAPDL+ E + IA
Sbjct: 295 THKPPVLVKIAPDLTEPELESIA 317
>gi|373956104|ref|ZP_09616064.1| Dihydroorotate dehydrogenase [Mucilaginibacter paludis DSM 18603]
gi|373892704|gb|EHQ28601.1| Dihydroorotate dehydrogenase [Mucilaginibacter paludis DSM 18603]
Length = 344
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 125/187 (66%), Gaps = 5/187 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V D VK + DV YFVVNVSSPNT NLR LQ K+ LK +L T+ + RN L K
Sbjct: 160 DAVSDYVKCFDRLFDVVDYFVVNVSSPNTPNLRALQEKEPLKQILNTL-QQRN-LKNKIS 217
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGE 239
PIL+KIAPDL+ + DI ++V + + G++ +NTT+ R E L + +K ETGGLSG+
Sbjct: 218 RPILLKIAPDLTNGQLDDIIEIV--QETGIAGVVATNTTISR-EGLTSVHKNETGGLSGK 274
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
PL +STE+I + + PIIGVGG+ S +DA EK+ AGASL+Q+YT F+Y GP LV
Sbjct: 275 PLTKRSTEVIQYLADKSNRSFPIIGVGGIHSPEDALEKLNAGASLIQLYTGFIYEGPGLV 334
Query: 300 TRIKSEL 306
+RI ++
Sbjct: 335 SRINKKI 341
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT NLR LQ K+ LK +L T ++ RN L K PIL+KIAPDL+
Sbjct: 174 DVVDYFVVNVSSPNTPNLRALQEKEPLKQILNT-LQQRN-LKNKISRPILLKIAPDLTNG 231
Query: 114 EKKDIADVVLDS 125
+ DI ++V ++
Sbjct: 232 QLDDIIEIVQET 243
>gi|443475347|ref|ZP_21065299.1| dihydroorotate oxidase A [Pseudanabaena biceps PCC 7429]
gi|443019794|gb|ELS33832.1| dihydroorotate oxidase A [Pseudanabaena biceps PCC 7429]
Length = 374
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 151/255 (59%), Gaps = 29/255 (11%)
Query: 86 TVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLD---SVKGILKFGDVAHYFVVN 142
T ++ +N LA L + + +L + ++A+ D S++ + +FGD YFVVN
Sbjct: 136 TAIDLKNYLANHRLG---IPLGINLGKSKVTELAEAKFDYAESLRSLYEFGD---YFVVN 189
Query: 143 VSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLAVKPLPPILVKIAPDLSLDEKKDIAD 200
VSSPNT NLR LQA +QL +L + + T N+ PILVKIAPDL+ DI
Sbjct: 190 VSSPNTPNLRDLQATEQLCGILAELKPINTVNK-------PILVKIAPDLN---DADIIA 239
Query: 201 VVLDSKC-KVDGLIVSNTTVDRYEYLDARYK-------EETGGLSGEPLRNKSTELISEM 252
VV S+ V G++ +NTT+ R EE GG+SG+P+R++S +I+ +
Sbjct: 240 VVKASQSYGVAGIVATNTTISRQNLTTTHLAITGKLVTEEAGGISGQPVRDRSLAVINLI 299
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
++ T G LPI+GVGG+F+ +DA++KI AGASLVQIYT +Y GP +V +I L L
Sbjct: 300 WQTTNGSLPIVGVGGIFTAEDAWQKITAGASLVQIYTGLIYEGPLVVKQILQGLVTKLDA 359
Query: 313 EGYNSVSQAVGAAHK 327
G +++ QA+G AHK
Sbjct: 360 HGLDNIQQAIGLAHK 374
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 66/136 (48%), Gaps = 25/136 (18%)
Query: 46 LLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLALKPLPPIL 103
L + +FGD YFVVNVSSPNT NLR LQA +QL +L + + T N+ PIL
Sbjct: 176 LRSLYEFGD---YFVVNVSSPNTPNLRDLQATEQLCGILAELKPINTVNK-------PIL 225
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
VKIAPDL+ DI VV S Y V + + NT R+ L
Sbjct: 226 VKIAPDLN---DADIIAVVKAS----------QSYGVAGIVATNTTISRQNLTTTHLAIT 272
Query: 164 LKTVVETRNQLAVKPL 179
K V E ++ +P+
Sbjct: 273 GKLVTEEAGGISGQPV 288
>gi|85713693|ref|ZP_01044683.1| dihydroorotate dehydrogenase [Nitrobacter sp. Nb-311A]
gi|85699597|gb|EAQ37464.1| dihydroorotate dehydrogenase [Nitrobacter sp. Nb-311A]
Length = 364
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 133/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD A+ + D V+ I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNIGANKDSANHIADYVRLIEIFAPVASYFTVNVSSPNTPGLRNLQQAAALDELLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--D 226
R ++ P+L+KIAPDL+L E D+ + + DG+IV NTT+ R L
Sbjct: 198 ARERVRQNAGDTPVLLKIAPDLTLAELDDVVHIA--RSRRTDGMIVGNTTLTRPSTLRDQ 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
AR KE+ GGLSG PL ST +++E Y T+G P++GVGG+ SG A KI+AGA+L+Q
Sbjct: 256 ARAKEQ-GGLSGRPLFRLSTRMVAETYVRTEGAFPLVGVGGIDSGGAALTKIRAGATLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G L+ IKS+L L + G +S++ +GA
Sbjct: 315 LYSSLVYKGLGLIDNIKSDLTSTLLRTGRDSLADVIGA 352
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIAPDL 110
F VA YF VNVSSPNT LR LQ L LL V++ R ++ P+L+KIAPDL
Sbjct: 160 FAPVASYFTVNVSSPNTPGLRNLQQAAALDELLARVIDARERVRQNAGDTPVLLKIAPDL 219
Query: 111 SLDEKKDIADVV 122
+L E D+ +
Sbjct: 220 TLAELDDVVHIA 231
>gi|398828166|ref|ZP_10586368.1| dihydroorotate dehydrogenase, subfamily 2 [Phyllobacterium sp.
YR531]
gi|398218884|gb|EJN05386.1| dihydroorotate dehydrogenase, subfamily 2 [Phyllobacterium sp.
YR531]
Length = 365
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D V GI KF ++A YF VN+SSPNT LR LQA++ LK LL V+E
Sbjct: 139 VNIGANKDSTDRVADYVAGIRKFYELASYFTVNISSPNTPGLRDLQARESLKELLGQVLE 198
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
TR+ LA P+ +KIAPDL DIA + + +DGLI+SNTT+ R
Sbjct: 199 TRDGLAETAGTRRPVFLKIAPDLPDSSLDDIAAEI--ALHPLDGLIISNTTLARSGLKSI 256
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG P+ +ST ++++M + LPIIGVGGV S A KI+AGA LVQ+
Sbjct: 257 NHTAEAGGLSGRPVFERSTIVLAKMRQRVGVNLPIIGVGGVDSAATAIAKIRAGADLVQL 316
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YTS +Y GP L +I +L L+++G +++
Sbjct: 317 YTSMIYRGPGLPGQIVKDLSAALRRDGIKHIAE 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI KF ++A YF VN+SSPNT LR LQA++ LK LL V+ETR+ LA P+
Sbjct: 154 YVAGIRKFYELASYFTVNISSPNTPGLRDLQARESLKELLGQVLETRDGLAETAGTRRPV 213
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
+KIAPDL DI A++ L + G++
Sbjct: 214 FLKIAPDLPDSSLDDIAAEIALHPLDGLI 242
>gi|332881929|ref|ZP_08449571.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680164|gb|EGJ53119.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 341
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ NQ A + PIL+KIAPDL+ D+ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKALLTTLQTANNQKAKQK--PILLKIAPDLTDDQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V + + G+I +NTT+ R E+L + ++ETGGLSG+PL+ +STE+I +++ +
Sbjct: 230 IIEIV--QQTHIAGVIATNTTITR-EHLISANRQETGGLSGKPLKQRSTEVIRFLHEKSG 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
G PIIGVGG+FS +DA EK+ AGASL+Q+Y+ F+Y G L+ RI L
Sbjct: 287 GTFPIIGVGGIFSEEDALEKLAAGASLIQLYSGFIYEGAGLIKRINKAL 335
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ LK LL T+ NQ A + PIL+KIAPDL+ D+ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKALLTTLQTANNQKAKQ--KPILLKIAPDLTDDQLLD 229
Query: 118 IADVV 122
I ++V
Sbjct: 230 IIEIV 234
>gi|84683810|ref|ZP_01011713.1| dihydroorotate dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
gi|84668553|gb|EAQ15020.1| dihydroorotate dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
Length = 354
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D V+ + + G V + VNVSSPNT LR LQ + L+ LL V++
Sbjct: 139 LNLGANKDSADRARDYVEVLKRCGPVVDFVTVNVSSPNTEKLRDLQGAEALRALLSGVMD 198
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + + P+ +KIAPDL+ E +IA V + K+D +I +NTT+DR E L +
Sbjct: 199 ARQGM--DKIIPVFLKIAPDLTEAEIAEIAQVA--QEVKLDAIIATNTTLDR-EGLKSAS 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++E GGLSG PL KST ++ + KLT G LP+IGVGG+ S +DA+ KIKAGA +Q+Y+
Sbjct: 254 RDEKGGLSGAPLFEKSTRTLARLAKLTGGHLPLIGVGGISSPEDAYAKIKAGAHAIQLYS 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ Y G LV I L+ +L +G++ +S A+G
Sbjct: 314 ALAYQGLSLVDDIARGLDRMLAADGHDHISTAIG 347
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ G V + VNVSSPNT LR LQ + L+ LL V++ R + + P+ +KIAPDL
Sbjct: 160 RCGPVVDFVTVNVSSPNTEKLRDLQGAEALRALLSGVMDARQ--GMDKIIPVFLKIAPDL 217
Query: 111 SLDEKKDIADVV 122
+ E +IA V
Sbjct: 218 TEAEIAEIAQVA 229
>gi|422302272|ref|ZP_16389635.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9806]
gi|389788566|emb|CCI15715.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9806]
Length = 382
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 126/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 RTIIDLAFS--YQLSGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEANGLTNINQAVG 376
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVL 123
+ I D+
Sbjct: 244 RTIIDLAF 251
>gi|259416843|ref|ZP_05740763.1| dihydroorotate oxidase [Silicibacter sp. TrichCH4B]
gi|259348282|gb|EEW60059.1| dihydroorotate oxidase [Silicibacter sp. TrichCH4B]
Length = 352
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + G ++ VNVSSPNT LR LQ K L LL V++
Sbjct: 137 LNLGANKDSDDRAQDFARVLSHCGAHLNFATVNVSSPNTEKLRDLQGKAALSALLAGVMD 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R L +P+P + +KIAPDL DIADV +S+ +D +I +NTT+ R + L + +
Sbjct: 197 AREGLD-RPIP-VFLKIAPDLDEAGLDDIADVARESR--IDAVIATNTTLAR-DGLKSAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++ETGGLSG PL KST +++++ G +PIIGVGG+ S +DA+ KI+AGAS VQ YT
Sbjct: 252 RDETGGLSGAPLFEKSTRVLAQLSTRLDGAVPIIGVGGISSAEDAYAKIRAGASAVQFYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L I + L+ LL ++G++SV+QAVG
Sbjct: 312 ALVYGGLSLAAEIANGLDALLARDGHDSVAQAVG 345
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 57 HYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKK 116
++ VNVSSPNT LR LQ K L LL V++ R L +P+ P+ +KIAPDL
Sbjct: 164 NFATVNVSSPNTEKLRDLQGKAALSALLAGVMDAREGLD-RPI-PVFLKIAPDLDEAGLD 221
Query: 117 DIADVVLDS 125
DIADV +S
Sbjct: 222 DIADVARES 230
>gi|418407966|ref|ZP_12981283.1| dihydroorotate dehydrogenase 2 [Agrobacterium tumefaciens 5A]
gi|358005952|gb|EHJ98277.1| dihydroorotate dehydrogenase 2 [Agrobacterium tumefaciens 5A]
Length = 363
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDSEDRIADYVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLGAVLE 197
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A + PI +KIAPDL+ + D+A+ L +DGLIVSNTT+ R
Sbjct: 198 RRRAEAERFSKRIPIFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSREGLRPG 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+K E GGLSG+PL ST ++++M + LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 PHKGEAGGLSGKPLFELSTTVLAKMRRRVGSNLPIIGVGGVSSPETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L + I L +L+ +EG S+
Sbjct: 316 YSCMVYEGPGLPSSIVKGLSKLVSREGVQSI 346
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E R A PI
Sbjct: 153 YVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLGAVLERRRAEAERFSKRIPI 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + D+A+ L
Sbjct: 213 FLKIAPDLTEEGLDDVAEEAL 233
>gi|325291877|ref|YP_004277741.1| Dihydroorotate dehydrogenase [Agrobacterium sp. H13-3]
gi|325059730|gb|ADY63421.1| Dihydroorotate dehydrogenase [Agrobacterium sp. H13-3]
Length = 363
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDSEDRIADYVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLGAVLE 197
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A + PI +KIAPDL+ + D+A+ L +DGLIVSNTT+ R
Sbjct: 198 RRRAEAERFGKRIPIFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSREGLRPG 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+K E GGLSG+PL ST ++++M + LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 PHKGEAGGLSGKPLFELSTTVLAKMRRRVGSNLPIIGVGGVSSPETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L + I L +L+ +EG S+
Sbjct: 316 YSCMVYEGPGLPSSIVKGLSKLVSREGVQSI 346
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E R A PI
Sbjct: 153 YVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLGAVLERRRAEAERFGKRIPI 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + D+A+ L
Sbjct: 213 FLKIAPDLTEEGLDDVAEEAL 233
>gi|254503101|ref|ZP_05115252.1| dihydroorotate oxidase [Labrenzia alexandrii DFL-11]
gi|222439172|gb|EEE45851.1| dihydroorotate oxidase [Labrenzia alexandrii DFL-11]
Length = 364
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 4/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D D V GI +F + A YF VN+SSPNT LR LQA+ L LL V+
Sbjct: 140 INVGANKDSEDRNADYVAGIREFAEFASYFTVNISSPNTPGLRDLQARSALADLLTRVMA 199
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K P+L+KIAPD+ + KDI + VLD K VDGLIVSNTT+ R
Sbjct: 200 ARDEATAKTGRQVPVLLKIAPDIVEGDLKDIVEEVLDKK--VDGLIVSNTTISREGLSGE 257
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
ETGGLSG PL +ST ++++ K+ LPIIGVGG+ S + A+EKI+AGA L+Q+
Sbjct: 258 GPFRETGGLSGRPLFQRSTIMLAKARKMAGADLPIIGVGGIDSAETAWEKIQAGADLLQL 317
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQA 321
Y++ V+ GP L+ I + L L ++G S+ A
Sbjct: 318 YSALVFKGPSLIDEILTGLTAKLDEKGLPSLRAA 351
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI +F + A YF VN+SSPNT LR LQA+ L LL V+ R++ K P+
Sbjct: 155 YVAGIREFAEFASYFTVNISSPNTPGLRDLQARSALADLLTRVMAARDEATAKTGRQVPV 214
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
L+KIAPD+ + KDI + VLD
Sbjct: 215 LLKIAPDIVEGDLKDIVEEVLD 236
>gi|357974007|ref|ZP_09137978.1| dihydroorotate dehydrogenase 2 [Sphingomonas sp. KC8]
Length = 344
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 127/214 (59%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D KG++ DVA Y VN+SSPNT LR LQ++ L LL V+E
Sbjct: 136 VNIGANKDAADRIADYAKGVIVMKDVADYLTVNISSPNTPGLRALQSRAALDELLAGVME 195
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R PP+ +K+APDL + DIA V D +D LIV+NTT+ R L + +
Sbjct: 196 ARGSQ----RPPVFLKVAPDLEPADIDDIAAVAADRG--LDALIVANTTITRPP-LRSAH 248
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL + + + + + T G +P+I GG+ S + A+ +I+AGASL+Q+Y+
Sbjct: 249 AGEAGGLSGAPLHDLALQRLRDFRTATGGTIPLIAAGGIASAEQAYARIRAGASLIQLYS 308
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP L RI L L+ ++G+ + QA+G
Sbjct: 309 ALVYGGPGLARRIVQGLPALMTRDGFARIEQAIG 342
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G + R+L R R G G N + A + + G++ DVA Y VN
Sbjct: 115 GGQAAALERLLKRRHRPGIVGVNIGAN------KDAADRIADYAKGVIVMKDVADYLTVN 168
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ++ L LL V+E R PP+ +K+APDL + DIA V
Sbjct: 169 ISSPNTPGLRALQSRAALDELLAGVMEARGSQ----RPPVFLKVAPDLEPADIDDIAAVA 224
Query: 123 LD 124
D
Sbjct: 225 AD 226
>gi|156100729|ref|XP_001616058.1| dihydroorotate dehydrogenase, mitochondrial precursor [Plasmodium
vivax Sal-1]
gi|148804932|gb|EDL46331.1| dihydroorotate dehydrogenase, mitochondrial precursor, putative
[Plasmodium vivax]
Length = 572
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 141/262 (53%), Gaps = 48/262 (18%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+SL + KD D++ D I K G A Y +NVSSPNT LR Q ++L +++ V E
Sbjct: 312 VSLGKNKDSPDILQDLSYCIGKIGRYADYIAINVSSPNTPGLRDHQKGERLHGIIQRVKE 371
Query: 170 -------------------------TRNQLAVKPLPP-------------------ILVK 185
T + V PP I VK
Sbjct: 372 EVAKLDGGGAPLGGATTGGAAMGGATTGEAVVGKAPPDEAATGGEPWANTTKRRPLIFVK 431
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKS 245
+APDL E+K IA+V+L+++ VDG+I+ NTT ++ ++++ GG+SGE L+ S
Sbjct: 432 LAPDLEEGERKSIANVLLNAE--VDGMIICNTTTQKFNI--KSFEDKKGGVSGEKLKGVS 487
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
T +IS+MY T GK+PII GG+F+G+DA EKI+AGAS+ Q+Y+ V++G RIK E
Sbjct: 488 THMISQMYNYTNGKIPIIASGGIFTGEDALEKIEAGASVCQLYSCLVFNGMKAAVRIKRE 547
Query: 306 LEELLQKEGYNSVSQAVGAAHK 327
L+ LL + GY + AVG AH+
Sbjct: 548 LDHLLYQRGYYKLGDAVGRAHR 569
>gi|334121437|ref|ZP_08495506.1| Dihydroorotate dehydrogenase [Microcoleus vaginatus FGP-2]
gi|333455055|gb|EGK83719.1| Dihydroorotate dehydrogenase [Microcoleus vaginatus FGP-2]
Length = 388
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 14/240 (5%)
Query: 95 ALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKL 154
A +P+P + +L + + D ++ D YFVVNVSSPNT LR L
Sbjct: 154 ASRPMPQSRFPLGINLGKSKVTPLEQAAADYLESFKLLKDWGDYFVVNVSSPNTPGLRSL 213
Query: 155 QAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIV 214
Q L +L+ +++ NQ + PILVKIAPDL + I D L ++ G+I
Sbjct: 214 QDAAGLSTILE-ILQQENQGS----KPILVKIAPDLESEAIVSILD--LAKTYQLAGIIA 266
Query: 215 SNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGG 267
+NTT+ R EE GG+SG P+R +STE+I +++ TKG+LPIIGVGG
Sbjct: 267 TNTTIRRDGLKTQILRETGQPIAEEAGGISGLPVRERSTEVIRFIWQYTKGELPIIGVGG 326
Query: 268 VFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+F+ +DA+EKI AGASL+Q+YT +VY GP +V RI L + L++ G++S+S+AVG+ ++
Sbjct: 327 IFTAEDAWEKIAAGASLIQVYTGWVYEGPWMVRRILQGLLQKLEEGGFSSISEAVGSDNQ 386
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ L +L+ +++ NQ + PILVKIAPDL +
Sbjct: 193 DWGDYFVVNVSSPNTPGLRSLQDAAGLSTILE-ILQQENQGS----KPILVKIAPDLESE 247
Query: 114 EKKDIADVV 122
I D+
Sbjct: 248 AIVSILDLA 256
>gi|126731025|ref|ZP_01746833.1| dihydroorotate dehydrogenase [Sagittula stellata E-37]
gi|126708327|gb|EBA07385.1| dihydroorotate dehydrogenase [Sagittula stellata E-37]
Length = 352
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 133/214 (62%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D K + + G + VNVSSPNT LR LQ K+ L LL V+
Sbjct: 137 LNLGANKDSDDRAADFAKVLSRCGAHLDFATVNVSSPNTEKLRDLQGKEALSALLAGVMA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L KPLP + +KIAPDL +D+ADV L S V G+I +NTT+ R + L + +
Sbjct: 197 ARDALP-KPLP-VFLKIAPDLDPQGLEDVADVALSSG--VAGVIATNTTLSR-DGLRSAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG+PL KST +++ + LT G+LP+IGVGGV + + A+ KI+AGAS VQ+YT
Sbjct: 252 KGEAGGLSGQPLFEKSTRVLARLSHLTDGRLPLIGVGGVSTAEQAYAKIRAGASAVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L I L+ LL ++ + +V+ AVG
Sbjct: 312 ALVYGGLGLGAEIARGLDALLARDNFKTVADAVG 345
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K+ L LL V+ R+ L KPL P+ +KIAPDL +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKEALSALLAGVMAARDALP-KPL-PVFLKIAPDLDPQGLED 222
Query: 118 IADVVLDS-VKGIL 130
+ADV L S V G++
Sbjct: 223 VADVALSSGVAGVI 236
>gi|223940627|ref|ZP_03632470.1| Dihydroorotate oxidase [bacterium Ellin514]
gi|223890708|gb|EEF57226.1| Dihydroorotate oxidase [bacterium Ellin514]
Length = 375
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 126/197 (63%), Gaps = 11/197 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP------PILVKIAPD 189
A +FVVNVSSPNT NLR+LQ K L +L + + + +P PILVK+APD
Sbjct: 177 ADFFVVNVSSPNTPNLRQLQDKTALNEILSALQQVNREQLAQPFAQGRSPKPILVKVAPD 236
Query: 190 LSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA---RYKEETGGLSGEPLRNKST 246
L+ + +I ++V ++ G++ +NTT+ R A R ETGGLSG PL +ST
Sbjct: 237 LTYEALDEILELV--GPRELSGIVATNTTIARPPTRHAQSSRTYAETGGLSGRPLAKRST 294
Query: 247 ELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
E+I +Y+ T GK+PIIGVGG+F+ DA++KI AGASL+Q+Y+ VY GP + I S L
Sbjct: 295 EIIRHLYRQTSGKVPIIGVGGIFNADDAWDKITAGASLIQVYSGMVYEGPGIAKNINSGL 354
Query: 307 EELLQKEGYNSVSQAVG 323
+ L+ +G +S+++AVG
Sbjct: 355 LKKLENKGISSIAEAVG 371
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE-TRNQLALKPLP------PILVKIAP 108
A +FVVNVSSPNT NLR+LQ K L +L + + R QLA +P PILVK+AP
Sbjct: 177 ADFFVVNVSSPNTPNLRQLQDKTALNEILSALQQVNREQLA-QPFAQGRSPKPILVKVAP 235
Query: 109 DLSLDEKKDIADVV 122
DL+ + +I ++V
Sbjct: 236 DLTYEALDEILELV 249
>gi|418296714|ref|ZP_12908557.1| dihydroorotate dehydrogenase 2 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355538889|gb|EHH08131.1| dihydroorotate dehydrogenase 2 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 363
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDSEDRIADYVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLTAVLE 197
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A + P+ +KIAPDL+ + D+A+ L +DGLIVSNTT+ R
Sbjct: 198 RRKAEAERFGKRIPVFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSREGLRPG 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+K E GGLSG+PL ST ++++M + LPIIGVGG+ S + A EK++AGA LVQ+
Sbjct: 256 PHKGEAGGLSGKPLFELSTTVLAKMRRRVGANLPIIGVGGISSAETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ +Y GP L + I L +L+ +EG S+ +
Sbjct: 316 YSCMIYEGPGLPSAIVKGLSKLVAREGVESIRE 348
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E R A P+
Sbjct: 153 YVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLTAVLERRKAEAERFGKRIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + D+A+ L
Sbjct: 213 FLKIAPDLTEEGLDDVAEEAL 233
>gi|359398936|ref|ZP_09191948.1| dihydroorotate oxidase [Novosphingobium pentaromativorans US6-1]
gi|357599690|gb|EHJ61397.1| dihydroorotate oxidase [Novosphingobium pentaromativorans US6-1]
Length = 351
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 130/214 (60%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D +A Y VN+SSPNT LR LQ + L LL V+E
Sbjct: 139 INIGANKDSPDRVADYATMARLMAPLAGYLAVNISSPNTPGLRALQDESALTGLLDAVIE 198
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + + PPI +K+APDL + I+ + +D K LIVSNTT+ R L + +
Sbjct: 199 ARGAVCGEDGPPIFLKVAPDLEPADVDAISRIAMDRKLGA--LIVSNTTISRPP-LSSPH 255
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E+GGLSG PLR+ + + + + K T G +P++GVGG+ + +DA+ +I+AGASLVQ+Y+
Sbjct: 256 AGESGGLSGAPLRDLAQQRLRDFRKATGGAMPLVGVGGIATAEDAWARIRAGASLVQLYS 315
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP + I LE L++++G+ +V++AVG
Sbjct: 316 AMVYEGPGIAKAIAKGLERLMKRDGFATVAEAVG 349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G ++ R+ +R+ R G G N S R+ + L+ L A Y VN
Sbjct: 118 GGAQAAVDRLEARLGRPGVVGINIGANK-DSPDRVADYATMARLMAPL-----AGYLAVN 171
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ + L LL V+E R + + PPI +K+APDL + I+ +
Sbjct: 172 ISSPNTPGLRALQDESALTGLLDAVIEARGAVCGEDGPPIFLKVAPDLEPADVDAISRIA 231
Query: 123 LDSVKGIL 130
+D G L
Sbjct: 232 MDRKLGAL 239
>gi|338972847|ref|ZP_08628218.1| dihydroorotate dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234008|gb|EGP09127.1| dihydroorotate dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
Length = 364
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 4/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD D V+ I F VA YF +N+SSPNT LR LQ L LL V++
Sbjct: 138 VNVGANKDSADRTADYVRLIELFAPVASYFTINISSPNTPGLRNLQQAAALDDLLARVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R ++ P+L+KIAPDL+L E D+ + +VDG+IV+NTT+ R L +
Sbjct: 198 ARERVRKNAGDSPLLLKIAPDLTLQELDDVVHIA--RSRRVDGMIVANTTLSRPATLREQ 255
Query: 229 YK-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
K +E GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGA+L+QI
Sbjct: 256 AKAKEQGGLSGRPLLRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALMKIRAGATLIQI 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y++ VY G LV IK++L L++ G +S+++ VGA
Sbjct: 316 YSALVYKGLGLVEDIKADLVSTLRRTGRDSLTEIVGA 352
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIAPDL 110
F VA YF +N+SSPNT LR LQ L LL V++ R ++ P+L+KIAPDL
Sbjct: 160 FAPVASYFTINISSPNTPGLRNLQQAAALDDLLARVIDARERVRKNAGDSPLLLKIAPDL 219
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
+L E LD V I + V V N + A LR + +AK+Q
Sbjct: 220 TLQE--------LDDVVHIARSRRVDGMIVANTTLSRPATLREQAKAKEQ 261
>gi|217979904|ref|YP_002364051.1| dihydroorotate dehydrogenase [Methylocella silvestris BL2]
gi|217505280|gb|ACK52689.1| dihydroorotate dehydrogenase [Methylocella silvestris BL2]
Length = 374
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 131/216 (60%), Gaps = 4/216 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD D V+ I + A Y VN+SSPNT LR LQ L LL +++
Sbjct: 146 VNVGANKDSADRTADYVRAIAQLAAPADYLTVNISSPNTPGLRDLQHAAALDDLLARILD 205
Query: 170 TRNQL-AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DA 227
R++L + P+L+KIAPDL+LDE I +V + +DGLIVSNTT+ R L +A
Sbjct: 206 ARDELISACGRKPVLLKIAPDLTLDELDAI--IVCARRRAIDGLIVSNTTLSRPSGLREA 263
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL + ST +++ + +G P++G GGV S + AF KI+AGASLVQ+
Sbjct: 264 ALAREQGGLSGRPLFDLSTRMLAAAFLRAEGAFPLVGAGGVDSAERAFAKIEAGASLVQL 323
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
Y++ V+ GP L IK L L++ G ++S+A+G
Sbjct: 324 YSALVFKGPGLADAIKRGLVATLERRGLPAISEAIG 359
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-ALKPLPPIL 103
++ I + A Y VN+SSPNT LR LQ L LL +++ R++L + P+L
Sbjct: 161 YVRAIAQLAAPADYLTVNISSPNTPGLRDLQHAAALDDLLARILDARDELISACGRKPVL 220
Query: 104 VKIAPDLSLDE 114
+KIAPDL+LDE
Sbjct: 221 LKIAPDLTLDE 231
>gi|425440285|ref|ZP_18820590.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9717]
gi|389719314|emb|CCH96828.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9717]
Length = 382
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 126/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILH-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 RTIIDLAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEANGLTNINQAVG 376
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILH-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+ I D+ Y + + + NT R L K + E ++
Sbjct: 244 RTIIDLAFS-------------YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
+PL
Sbjct: 291 GQPL 294
>gi|383456988|ref|YP_005370977.1| dihydroorotate dehydrogenase 2 [Corallococcus coralloides DSM 2259]
gi|380734054|gb|AFE10056.1| dihydroorotate dehydrogenase 2 [Corallococcus coralloides DSM 2259]
Length = 362
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 12/224 (5%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V I + ++ + D V V + GD Y VVN SSPNT LRKLQ + L
Sbjct: 141 PLGVNIGKNKDTPLERAVDDYVA-CVDALAPLGD---YVVVNASSPNTPGLRKLQEPEAL 196
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
LL V E +Q+A P P+ +KIAPDL+ + ++ DV + + GLI +NTT+
Sbjct: 197 SALLLAVRERMDQVA--PGTPLFLKIAPDLTPEAVDEVVDVAMARG--LSGLIATNTTLT 252
Query: 221 R-YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIK 279
R +E+ ++ +E GGLSG P+R S +I Y+ ++G LP+IGVGGVF+ +D +EK++
Sbjct: 253 RPFEH---KHSKEAGGLSGAPVRELSNAVIRRAYQRSQGALPLIGVGGVFTAQDVYEKLR 309
Query: 280 AGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
AGA++VQ+YT F+Y GP +V RI EL LL ++G+ SV +G
Sbjct: 310 AGATVVQVYTGFIYEGPGMVDRILPELGALLARDGFASVRDVIG 353
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 7 STCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSP 66
+ R+ +R ++ G G N + R + ++ + + Y VVN SSP
Sbjct: 127 TAAERLKAREWKPGPLGVNIGKNKDTPLER----AVDDYVACVDALAPLGDYVVVNASSP 182
Query: 67 NTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVL 123
NT LRKLQ + L LL V E +Q+A P P+ +KIAPDL+ + ++ DV +
Sbjct: 183 NTPGLRKLQEPEALSALLLAVRERMDQVA--PGTPLFLKIAPDLTPEAVDEVVDVAM 237
>gi|405380555|ref|ZP_11034393.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium sp. CF142]
gi|397322967|gb|EJJ27367.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium sp. CF142]
Length = 362
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLT 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A K P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEEAEKAGRKIPVFLKIAPDLTEEGMDDIAAEALSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+E GGLSG PL KST ++++M K LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 LQAKEAGGLSGAPLFEKSTVVLAKMRKRVGAALPIIGVGGVSSAETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I L +LL +E S+
Sbjct: 316 YSCMVYEGPGLPGTIVRGLSKLLDREKVASI 346
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 11 RILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTAN 70
R LS++ R+G G N S R+ +V GI +F VA YF N+SSPNT
Sbjct: 125 RRLSQIGRAGIVGVNIGANK-DSEDRIADYVA-----GIRRFYSVARYFTANISSPNTPG 178
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLDEKKDIA 119
LR LQA++ L LL V+ R++ A K P+ +KIAPDL+ + DIA
Sbjct: 179 LRDLQARESLAALLSAVLTARDEEAEKAGRKIPVFLKIAPDLTEEGMDDIA 229
>gi|49475187|ref|YP_033228.1| dihydroorotate dehydrogenase 2 [Bartonella henselae str. Houston-1]
gi|81827740|sp|Q6G4F7.1|PYRD_BARHE RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|49237992|emb|CAF27197.1| Dihydroorotate dehydrogenase [Bartonella henselae str. Houston-1]
Length = 362
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D + I F DVA YF VN+SSPNT LR LQ +D L L+ + +
Sbjct: 136 INIGANKDTVDKIDDYITSIAYFYDVADYFTVNISSPNTPGLRDLQVRDSLHLLMNAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS E D+A+ + S DGLIVSNTT+ R +
Sbjct: 196 ARNEQKKKHGFFVPIFLKIAPDLSEKELDDVAEEMKLSD--FDGLIVSNTTLSRQGLREC 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + K+ IIGVGG+ K A EK+KAGA LVQ+
Sbjct: 254 TLRNEEGGLSGRPLFERSTIVLAKMRQKLGKKIAIIGVGGIRDAKTALEKVKAGADLVQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ + +QK+G S+
Sbjct: 314 YSGMVYEGPDLAITILKEILQFMQKDGVESI 344
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ I F DVA YF VN+SSPNT LR LQ +D L L+ + + RN+ K PI
Sbjct: 151 YITSIAYFYDVADYFTVNISSPNTPGLRDLQVRDSLHLLMNAISQARNEQKKKHGFFVPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDLS E D+A+
Sbjct: 211 FLKIAPDLSEKELDDVAE 228
>gi|15791265|ref|NP_281089.1| dihydroorotate dehydrogenase 2 [Halobacterium sp. NRC-1]
gi|169237023|ref|YP_001690223.1| dihydroorotate dehydrogenase 2 [Halobacterium salinarum R1]
gi|73913681|sp|Q9HMK2.1|PYRD_HALSA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|229470317|sp|B0R808.1|PYRD_HALS3 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|10581898|gb|AAG20569.1| dihydroorotate dehydrogenase [Halobacterium sp. NRC-1]
gi|167728089|emb|CAP14877.1| dihydroorotate dehydrogenase (quinone) [Halobacterium salinarum R1]
Length = 349
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 141/233 (60%), Gaps = 15/233 (6%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L +PLP + V + ++ + +AD D + GD Y VVNVSSPNT LR
Sbjct: 129 RLDAEPLPDVPVGV--NIGKSKTTPLADAPDDYTYTFSRVGDAVDYVVVNVSSPNTPGLR 186
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDG 211
+LQ +DQL +L+ + + P+LVK++PDL D +AD V L + +DG
Sbjct: 187 ELQGRDQLAAILEALQDAGAS-------PLLVKLSPDLHQDA---VADAVELANDLGLDG 236
Query: 212 LIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
++ +NTT +R E L + E GGLSG P+R ++TE + + + T P++GVGGV +
Sbjct: 237 IVATNTTTERPESLSHPHAGEQGGLSGAPIRERATEQVRFVAERTD--QPVVGVGGVATA 294
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+DA+EKI+AGAS+VQ+YT+ VY GP + RI L LL+++G++SV AVGA
Sbjct: 295 EDAYEKIRAGASVVQLYTALVYEGPWVAKRINEGLVSLLERDGFDSVEDAVGA 347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ GD Y VVNVSSPNT LR+LQ +DQL +L+ + + P+LVK++PDL
Sbjct: 165 RVGDAVDYVVVNVSSPNTPGLRELQGRDQLAAILEALQDAGAS-------PLLVKLSPDL 217
Query: 111 SLDEKKDIADVVLD 124
D D ++ D
Sbjct: 218 HQDAVADAVELAND 231
>gi|334142988|ref|YP_004536200.1| dihydroorotate oxidase [Novosphingobium sp. PP1Y]
gi|333941024|emb|CCA94382.1| dihydroorotate oxidase [Novosphingobium sp. PP1Y]
Length = 351
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D +A Y VN+SSPNT LR LQ + L LL V+E
Sbjct: 139 INIGANKDSVDRVADYATMARLMAPLASYLAVNISSPNTPGLRALQDESSLTGLLDAVIE 198
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + + PPI +K+APDL + I+ + +D K + LIVSNTT+ R L +
Sbjct: 199 ARGAVCGEDGPPIFLKVAPDLEPADVDAISRIAIDRK--LGALIVSNTTISRPP-LSSPQ 255
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E+GGLSG PLR+ + + + + K T G +P++GVGG+ + +DA+ +I+AGASLVQ+Y+
Sbjct: 256 AGESGGLSGAPLRDLAQQRLRDFRKATGGAMPLVGVGGIATAEDAWARIRAGASLVQLYS 315
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP + I LE+L++++G+ +V++AVG
Sbjct: 316 AMVYEGPGIAKAIAKGLEQLMKRDGFATVAEAVG 349
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G ++ R+ +R+ R G G N S R+ + L+ L A Y VN
Sbjct: 118 GGAQAAVERLEARLGRPGVVGINIGANK-DSVDRVADYATMARLMAPL-----ASYLAVN 171
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ + L LL V+E R + + PPI +K+APDL + I+ +
Sbjct: 172 ISSPNTPGLRALQDESSLTGLLDAVIEARGAVCGEDGPPIFLKVAPDLEPADVDAISRIA 231
Query: 123 LDSVKGIL 130
+D G L
Sbjct: 232 IDRKLGAL 239
>gi|312113889|ref|YP_004011485.1| dihydroorotate dehydrogenase [Rhodomicrobium vannielii ATCC 17100]
gi|311219018|gb|ADP70386.1| dihydroorotate dehydrogenase [Rhodomicrobium vannielii ATCC 17100]
Length = 350
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 124/201 (61%), Gaps = 13/201 (6%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K D + D V G++ FG VA Y +N+SSPNT LR LQA DQL LL V++
Sbjct: 135 VNIGANKTSEDRIADYVAGVVAFGPVAAYLTINISSPNTPGLRDLQAPDQLAALLDAVMD 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKC----KVDGLIVSNTTVDRYEYL 225
R +L + P+LVK+APDL D D+ +C VDG I++NTT+ R E L
Sbjct: 195 ARAKLTR--VVPVLVKLAPDLHDD------DIAPTMRCLTDHGVDGAILTNTTLSR-EGL 245
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
R + ETGGLSG PL +ST ++ + T G+LP+IGVGGV SGK A KI+AGASLV
Sbjct: 246 TDRRRGETGGLSGRPLFARSTRFLARCFIETGGRLPLIGVGGVDSGKTAVAKIRAGASLV 305
Query: 286 QIYTSFVYHGPPLVTRIKSEL 306
Q+YT VY G L+ IK+ L
Sbjct: 306 QLYTGLVYEGAGLLPAIKAAL 326
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G++ FG VA Y +N+SSPNT LR LQA DQL LL V++ R +L + P+LV
Sbjct: 150 YVAGVVAFGPVAAYLTINISSPNTPGLRDLQAPDQLAALLDAVMDARAKLTR--VVPVLV 207
Query: 105 KIAPDLSLDE 114
K+APDL D+
Sbjct: 208 KLAPDLHDDD 217
>gi|427719968|ref|YP_007067962.1| dihydroorotate oxidase A [Calothrix sp. PCC 7507]
gi|427352404|gb|AFY35128.1| dihydroorotate oxidase A [Calothrix sp. PCC 7507]
Length = 379
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 14/201 (6%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ L +L + Q+ K PI VKIAPDL+ +
Sbjct: 184 DLGDYFVVNVSSPNTPGLRSLQDATMLGTILDVL-----QIENKTQKPIFVKIAPDLAWE 238
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKST 246
DI + L + G+I +NTT+ R E +EE GG+SG PLR++ST
Sbjct: 239 AIADI--IALAQTYHLAGIIATNTTISRDGLQTQIIEQTGKTVQEEAGGISGAPLRSRST 296
Query: 247 ELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
E+I +++ T+G+LPIIGVGGVFS +DA+EKI AGASL+Q+YT ++Y GP +V RI L
Sbjct: 297 EVIRFIWQQTQGQLPIIGVGGVFSPEDAWEKITAGASLIQVYTGWIYEGPMMVRRILLGL 356
Query: 307 EELLQKEGYNSVSQAVGAAHK 327
L++ S+S+AVG K
Sbjct: 357 LAKLEQNKLTSISEAVGLEAK 377
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ L +L + Q+ K PI VKIAPDL+ +
Sbjct: 184 DLGDYFVVNVSSPNTPGLRSLQDATMLGTILDVL-----QIENKTQKPIFVKIAPDLAWE 238
Query: 114 EKKDI 118
DI
Sbjct: 239 AIADI 243
>gi|124003584|ref|ZP_01688433.1| dihydroorotate oxidase [Microscilla marina ATCC 23134]
gi|123991153|gb|EAY30605.1| dihydroorotate oxidase [Microscilla marina ATCC 23134]
Length = 356
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 127/185 (68%), Gaps = 9/185 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-LPPILVKIAPDLSL 192
D YFVVNVSSPNT NLR LQ K+ L LL T+ +N+ KP PIL+KIAPDLS
Sbjct: 169 DYVDYFVVNVSSPNTPNLRALQDKEPLTKLLVTL---QNKNKQKPQTKPILLKIAPDLSN 225
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGLSGEPLRNKSTELI 249
++ ++ +V+LD+K +DGLI +NTT+DR + + ET GGLSG+PL+++STE+I
Sbjct: 226 EQLDEVVEVLLDTK--IDGLIATNTTIDRGGLQADKTEIETIGAGGLSGKPLKDRSTEVI 283
Query: 250 SEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
+++ + G PIIGVGG+ S DA EK++AGASLVQ+Y+ F+Y GP L+ IK L ++
Sbjct: 284 RYIHQKSNGAFPIIGVGGIASAADAIEKLEAGASLVQVYSGFIYEGPALIKNIKKALIKM 343
Query: 310 LQKEG 314
+G
Sbjct: 344 QSNKG 348
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPILVKIAPDLSL 112
D YFVVNVSSPNT NLR LQ K+ L LL T+ +N+ KP PIL+KIAPDLS
Sbjct: 169 DYVDYFVVNVSSPNTPNLRALQDKEPLTKLLVTL---QNKNKQKPQTKPILLKIAPDLSN 225
Query: 113 DEKKDIADVVLDS 125
++ ++ +V+LD+
Sbjct: 226 EQLDEVVEVLLDT 238
>gi|425469482|ref|ZP_18848415.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9701]
gi|389880750|emb|CCI38568.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9701]
Length = 402
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 126/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 RTIIDLAFS--YELAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEANGLTNINQAVG 376
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+ I D+ Y + + + NT R L K + E ++
Sbjct: 244 RTIIDLAFS-------------YELAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
+PL
Sbjct: 291 GQPL 294
>gi|404449590|ref|ZP_11014579.1| dihydroorotate dehydrogenase 2 [Indibacter alkaliphilus LW1]
gi|403764854|gb|EJZ25743.1| dihydroorotate dehydrogenase 2 [Indibacter alkaliphilus LW1]
Length = 349
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR+LQ K+ LK LL T V+ N+ KP PIL+KIAPDL++ + D
Sbjct: 173 YFVVNVSSPNTPNLRELQEKEPLKKLL-TAVKEANEEHQKP-KPILLKIAPDLTVGQLDD 230
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGLSGEPLRNKSTELISEMYK 254
I ++V+D+K +DG+I +NTT+DR + ++ K E+ GGLSG+ L +STE+I ++K
Sbjct: 231 IIEIVIDTK--IDGVIATNTTIDRSQLRTSKEKIESIGAGGLSGKVLAKRSTEVIRYLHK 288
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
+ PIIGVGG++S +DA EK++AGASL+QIY+ +Y GP LV IK L +K+
Sbjct: 289 QSNDAFPIIGVGGIYSAQDAIEKLEAGASLIQIYSGMIYEGPALVKNIKKGLVAYYEKQ 347
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR+LQ K+ LK LL T V+ N+ KP PIL+KIAPDL++ + D
Sbjct: 173 YFVVNVSSPNTPNLRELQEKEPLKKLL-TAVKEANEEHQKP-KPILLKIAPDLTVGQLDD 230
Query: 118 IADVVLDS 125
I ++V+D+
Sbjct: 231 IIEIVIDT 238
>gi|443313751|ref|ZP_21043361.1| dihydroorotate oxidase A [Synechocystis sp. PCC 7509]
gi|442776164|gb|ELR86447.1| dihydroorotate oxidase A [Synechocystis sp. PCC 7509]
Length = 377
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 134/229 (58%), Gaps = 16/229 (6%)
Query: 103 LVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKH 162
L+ I +L + + D D + D+ YFVVNVSSPNT LR LQ L
Sbjct: 152 LIPIGINLGKSKVTALEDAPADYLGSFRALQDLGDYFVVNVSSPNTPGLRTLQDAGSLNA 211
Query: 163 LLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCK-VDGLIVSNTTVDR 221
+L ++ NQ PILVKIAPDL D IAD++ +K + + G+I +NTT+ R
Sbjct: 212 ILD-ALQQENQ----GRKPILVKIAPDLEWDA---IADIIKVAKIQQLAGIIATNTTIRR 263
Query: 222 -------YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDA 274
EE GG+SG P++N+STE+I +Y TKG+LPIIGVGG+F+ DA
Sbjct: 264 DNLQTQVIATTGKSIHEEAGGISGLPIKNRSTEVIRFIYSETKGQLPIIGVGGIFTATDA 323
Query: 275 FEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+EKI AGASL+Q+YT ++Y GP +V RI L+E L + SVSQA+G
Sbjct: 324 WEKITAGASLLQVYTGWIYEGPLMVRRILIGLQEKLLEHQLTSVSQAIG 372
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ L +L ++ NQ PILVKIAPDL D
Sbjct: 183 DLGDYFVVNVSSPNTPGLRTLQDAGSLNAILD-ALQQENQ----GRKPILVKIAPDLEWD 237
Query: 114 EKKDIADVV-LDSVKGIL 130
DI V + + GI+
Sbjct: 238 AIADIIKVAKIQQLAGII 255
>gi|75674662|ref|YP_317083.1| dihydroorotate dehydrogenase 2 [Nitrobacter winogradskyi Nb-255]
gi|74419532|gb|ABA03731.1| dihydroorotate oxidase A [Nitrobacter winogradskyi Nb-255]
Length = 364
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 134/218 (61%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD A+ + D V+ I F VA YF VNVSSPNT LR LQ L LL V++
Sbjct: 138 VNIGANKDSANRIADYVRLIEIFAPVASYFTVNVSSPNTPGLRNLQQAAALDELLAKVID 197
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCK-VDGLIVSNTTVDRYEYL-D 226
R ++ P+L+KIAPDL+L E + DVV ++ + +DG+IV NTT+ R L D
Sbjct: 198 ARERVRQNAGDTPVLLKIAPDLTLGE---LDDVVHTARSRRIDGMIVGNTTLARPSTLRD 254
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGA+L+Q
Sbjct: 255 QSRAKEQGGLSGRPLFQLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALTKIRAGATLIQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S VY G LV IK +L L + G +S+S+ +GA
Sbjct: 315 LYSSLVYKGLGLVDAIKRDLTSTLLRTGRDSLSEIIGA 352
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIAPDL 110
F VA YF VNVSSPNT LR LQ L LL V++ R ++ P+L+KIAPDL
Sbjct: 160 FAPVASYFTVNVSSPNTPGLRNLQQAAALDELLAKVIDARERVRQNAGDTPVLLKIAPDL 219
Query: 111 SLDEKKDI 118
+L E D+
Sbjct: 220 TLGELDDV 227
>gi|434402349|ref|YP_007145234.1| dihydroorotate oxidase A [Cylindrospermum stagnale PCC 7417]
gi|428256604|gb|AFZ22554.1| dihydroorotate oxidase A [Cylindrospermum stagnale PCC 7417]
Length = 378
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 128/198 (64%), Gaps = 16/198 (8%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ L +L + + N PI VKIAPDL
Sbjct: 184 DLGDYFVVNVSSPNTPGLRSLQDAAMLGAILDLLQQANNSQK-----PIFVKIAPDL--- 235
Query: 194 EKKDIADVVLDSKC-KVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKS 245
E IAD++ +K K+ G+I +NTT+ R E ++E GG+SG PLR++S
Sbjct: 236 EWVAIADIITLAKTYKLAGIIATNTTIRRDQLKTQVIEQTGKSPEDEAGGISGAPLRDRS 295
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
TE+I +++ T+G++PIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y GP +V+RI +
Sbjct: 296 TEVIRFIWQQTQGQMPIIGVGGIFNPEDAWEKITAGASLIQVYTGWIYEGPLMVSRILAG 355
Query: 306 LEELLQKEGYNSVSQAVG 323
L L++ G S+S+AVG
Sbjct: 356 LLAKLEENGLTSISEAVG 373
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ L +L + + N PI VKIAPDL
Sbjct: 184 DLGDYFVVNVSSPNTPGLRSLQDAAMLGAILDLLQQANNSQK-----PIFVKIAPDL--- 235
Query: 114 EKKDIADVV 122
E IAD++
Sbjct: 236 EWVAIADII 244
>gi|406661170|ref|ZP_11069293.1| Dihydroorotate dehydrogenase (quinone) [Cecembia lonarensis LW9]
gi|405554957|gb|EKB50023.1| Dihydroorotate dehydrogenase (quinone) [Cecembia lonarensis LW9]
Length = 349
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 129/197 (65%), Gaps = 7/197 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D VLD + + YFVVNVSSPNT NLR+LQ K+ LK LL + V+ N KP
Sbjct: 155 DAVLDYLYCLEVLHPYVDYFVVNVSSPNTPNLRELQEKEPLKKLL-SAVKNANTKKSKP- 212
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGL 236
PIL+KIAPDL++ + DI D+VL++K +DG+I +NTT+DR + + E GG+
Sbjct: 213 KPILLKIAPDLTVGQLDDIIDIVLETK--IDGVIATNTTIDRNQLKSPKALIENIGAGGV 270
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG+ L +ST++I + + PIIGVGG+F+ KDA EK++AGASLVQIYT +Y GP
Sbjct: 271 SGKVLSKRSTDVIKYLSIQSNQAFPIIGVGGIFTAKDAIEKLEAGASLVQIYTGMIYEGP 330
Query: 297 PLVTRIKSELEELLQKE 313
+V RIK L E L+K+
Sbjct: 331 GIVKRIKKGLAEYLEKQ 347
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR+LQ K+ LK LL + V+ N KP PIL+KIAPDL++ + D
Sbjct: 173 YFVVNVSSPNTPNLRELQEKEPLKKLL-SAVKNANTKKSKP-KPILLKIAPDLTVGQLDD 230
Query: 118 IADVVLDS 125
I D+VL++
Sbjct: 231 IIDIVLET 238
>gi|423066263|ref|ZP_17055053.1| dihydroorotate oxidase [Arthrospira platensis C1]
gi|406712305|gb|EKD07494.1| dihydroorotate oxidase [Arthrospira platensis C1]
Length = 388
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 128/201 (63%), Gaps = 17/201 (8%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ +L +L TV++ N A KPL +KIAPDL
Sbjct: 185 DLGDYFVVNVSSPNTPGLRSLQGSTELNEIL-TVLQQENIAASKPL---FIKIAPDL--- 237
Query: 194 EKKDIADVV-LDSKCKVDGLIVSNTTVDRYEYLDARY--------KEETGGLSGEPLRNK 244
E K I D++ L + G+I +NTT+ R + L ++ E GG+SG PLR +
Sbjct: 238 EWKAIDDIIELARTHNLAGIIATNTTISR-DNLKTQWLPQTGNPITSEAGGISGAPLRER 296
Query: 245 STELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKS 304
ST +I +++ T G++PIIGVGG+F+ +DA+EKI AGA L+Q+YT +VY GP +V R+ +
Sbjct: 297 STAVIRHIWEQTNGEIPIIGVGGIFTAEDAWEKITAGACLLQVYTGWVYEGPLMVHRLLT 356
Query: 305 ELEELLQKEGYNSVSQAVGAA 325
L + L+ G N +SQA+G A
Sbjct: 357 GLLQKLEHHGLNHISQAIGVA 377
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ +L +L TV++ N A KPL +KIAPDL
Sbjct: 185 DLGDYFVVNVSSPNTPGLRSLQGSTELNEIL-TVLQQENIAASKPL---FIKIAPDL--- 237
Query: 114 EKKDIADVV 122
E K I D++
Sbjct: 238 EWKAIDDII 246
>gi|398350054|ref|YP_006395518.1| dihydroorotate dehydrogenase (quinone) [Sinorhizobium fredii USDA
257]
gi|390125380|gb|AFL48761.1| dihydroorotate dehydrogenase (quinone) [Sinorhizobium fredii USDA
257]
Length = 362
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRIADYVAGIRTFHAVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A K P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 ARDEEAAKGGRRIPVFLKIAPDLTEEGMDDIAAEVLAHD--LDGLIVSNTTLSREGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG+PL KST +++ M K K+PIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGKPLFEKSTAVLARMRKRLGPKVPIIGVGGVSSAETAAEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L RI L +L +E S+ +
Sbjct: 316 YSCMVYEGPGLPGRIVRGLSQLCDREKLASIRE 348
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R++ A K P+
Sbjct: 153 YVAGIRTFHAVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEEAAKGGRRIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|414169791|ref|ZP_11425524.1| dihydroorotate dehydrogenase [Afipia clevelandensis ATCC 49720]
gi|410885523|gb|EKS33338.1| dihydroorotate dehydrogenase [Afipia clevelandensis ATCC 49720]
Length = 364
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 4/212 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD AD D V+ I F VA YF +N+SSPNT LR LQ L LL V++ R ++
Sbjct: 143 NKDSADRTADYVRLIELFAPVASYFTINISSPNTPGLRNLQQAAALDDLLARVIDARERV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EE 232
P+L+KIAPDL+L E D+ + +VDG+IV+NTT+ R L K +E
Sbjct: 203 RKNAGDSPLLLKIAPDLTLQELDDVVHIA--RSRRVDGMIVANTTLSRPASLRETVKAKE 260
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGA+L+Q+Y+S V
Sbjct: 261 QGGLSGRPLLRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALMKIRAGATLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK++L L++ G +S+++ VGA
Sbjct: 321 YKGLGLVEDIKADLVSTLRRTGRDSLTEIVGA 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIAPDL 110
F VA YF +N+SSPNT LR LQ L LL V++ R ++ P+L+KIAPDL
Sbjct: 160 FAPVASYFTINISSPNTPGLRNLQQAAALDDLLARVIDARERVRKNAGDSPLLLKIAPDL 219
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRK-LQAKDQ 159
+L E LD V I + V V N + A+LR+ ++AK+Q
Sbjct: 220 TLQE--------LDDVVHIARSRRVDGMIVANTTLSRPASLRETVKAKEQ 261
>gi|428779887|ref|YP_007171673.1| dihydroorotate dehydrogenase, subfamily 2 [Dactylococcopsis salina
PCC 8305]
gi|428694166|gb|AFZ50316.1| dihydroorotate dehydrogenase, subfamily 2 [Dactylococcopsis salina
PCC 8305]
Length = 373
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 136/212 (64%), Gaps = 14/212 (6%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
+ D D + L+ + YFV+NVSSPNT LR LQ QL +L+ + Q
Sbjct: 165 LEDAANDYLTSFLRLREWGDYFVINVSSPNTPGLRSLQDSAQLSLILEAIQSNNPQRK-- 222
Query: 178 PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR------YKE 231
PILVKIAPDL+ + + + +V+ ++ ++ G+I +NTT+++ + L R E
Sbjct: 223 ---PILVKIAPDLTWEAIEQV--LVIANQYQLAGIIATNTTIEK-QSLKTRTINGYPITE 276
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
E GG+SG+PLR+++T +I +Y+ T+GKLPIIGVGG+F+ DA+EKI AGA+L+Q+YT +
Sbjct: 277 EAGGISGKPLRDRATAIIRFIYQQTEGKLPIIGVGGIFTAADAWEKITAGATLLQVYTGW 336
Query: 292 VYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+Y GP + + + L E L+++G + +S+AVG
Sbjct: 337 IYEGPMMARNVLTGLTEKLEEQGLSHLSEAVG 368
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 20/86 (23%)
Query: 28 HNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 87
++ L+SF R+R W GD YFV+NVSSPNT LR LQ QL +L+ +
Sbjct: 170 NDYLTSFLRLREW------------GD---YFVINVSSPNTPGLRSLQDSAQLSLILEAI 214
Query: 88 VETRNQLALKPLPPILVKIAPDLSLD 113
Q PILVKIAPDL+ +
Sbjct: 215 QSNNPQRK-----PILVKIAPDLTWE 235
>gi|298208257|ref|YP_003716436.1| dihydroorotate dehydrogenase [Croceibacter atlanticus HTCC2559]
gi|83848178|gb|EAP86048.1| dihydroorotate dehydrogenase [Croceibacter atlanticus HTCC2559]
Length = 339
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 122/178 (68%), Gaps = 7/178 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
+V YFVVNVSSPNT LR+LQ K+ L LL T+ + Q + PIL+KIAPDL+ D
Sbjct: 168 NVVDYFVVNVSSPNTPGLRELQDKEPLTKLLATLQDLNAQKEKRK--PILLKIAPDLTED 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI D+V + K+DG+I +NTT+ R E L + KEE GGLSG+PL +STE+I +
Sbjct: 226 QLLDIIDIV--ATTKIDGVIATNTTISR-EGLTSVNKEEIGGLSGKPLTKRSTEVIRFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
+ + PIIGVGG+ S +DA EKI+AGASLVQ+YT F+Y GP L+ I +EL LLQ
Sbjct: 283 ERSNKAFPIIGVGGIHSAQDALEKIEAGASLVQLYTGFIYEGPQLIKDINTEL--LLQ 338
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++L +V YFVVNVSSPNT LR+LQ K+ L LL T+ + Q + PIL+
Sbjct: 159 YILCFNALFNVVDYFVVNVSSPNTPGLRELQDKEPLTKLLATLQDLNAQKEKR--KPILL 216
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL+ D+ DI D+V
Sbjct: 217 KIAPDLTEDQLLDIIDIV 234
>gi|99081391|ref|YP_613545.1| dihydroorotate dehydrogenase 2 [Ruegeria sp. TM1040]
gi|99037671|gb|ABF64283.1| dihydroorotate oxidase A [Ruegeria sp. TM1040]
Length = 352
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 136/214 (63%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + G + VNVSSPNT LR LQ KD L LL V++
Sbjct: 137 LNLGANKDSEDRAQDFARVLSHCGAHLDFATVNVSSPNTEKLRDLQGKDALASLLAGVID 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R L +P+P + +KIAPDL + DIA+V DS +D +I +NTT+ R + L + +
Sbjct: 197 AREALQ-RPIP-VFLKIAPDLDISGLDDIAEVARDSG--IDAVIATNTTLSR-DGLKSTH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++E GGLSG PL +ST +++++ + G +PIIGVGG+ + + A+ KI+AGAS VQ+YT
Sbjct: 252 RDEMGGLSGAPLFERSTRVLAQLSQRLDGAVPIIGVGGISTAEGAYAKIRAGASAVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L + + S L+ LL ++G+++V++AVG
Sbjct: 312 ALVYGGLSLASEVASGLDALLARDGFSNVAEAVG 345
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ KD L LL V++ R L +P+ P+ +KIAPDL + D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKDALASLLAGVIDAREALQ-RPI-PVFLKIAPDLDISGLDD 222
Query: 118 IADVVLDS 125
IA+V DS
Sbjct: 223 IAEVARDS 230
>gi|389584779|dbj|GAB67511.1| dihydroorotate dehydrogenase mitochondrial precursor, partial
[Plasmodium cynomolgi strain B]
Length = 385
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 157/316 (49%), Gaps = 63/316 (19%)
Query: 52 FGDVAHYFVVNVSSPN-------TANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
F DV ++N N T NLR+ + K + LL+ R+ + +
Sbjct: 91 FRDVGTRSIINSCGFNNIGCDEVTENLRRFREKQKTDKLLQ-----RHLVGV-------- 137
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL 164
SL + KD AD++ D I + G A Y +NVSSPNT LR Q ++L ++
Sbjct: 138 ------SLGKNKDSADILEDLSYCIARVGRYADYIAINVSSPNTPGLRDNQQSERLHGII 191
Query: 165 KTVVETRNQL---------------------------------AVKPLPPILVKIAPDLS 191
V E +L K P I VK+APDL
Sbjct: 192 LRVKEEVAKLDGGKAAVGKEVGKAASGKAAVEKPYVGGEPWENTTKRRPLIFVKLAPDLE 251
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
EKK IA+V+L K +VDG+I+ NTT ++ ++ + GG+SGE L++ ST IS+
Sbjct: 252 ESEKKKIANVLL--KTEVDGMIICNTTTQKFNI--KSFQNKKGGVSGEKLKDISTNFISQ 307
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
MY T +PII GG+F+GKDA EKI+AGAS+ Q+Y+ V++G RIK EL+ LL
Sbjct: 308 MYNYTNKNIPIIASGGIFTGKDALEKIEAGASVCQLYSCLVFNGMKAAVRIKRELDHLLY 367
Query: 312 KEGYNSVSQAVGAAHK 327
+ GY + A+G AH+
Sbjct: 368 QRGYYKLEDAIGKAHR 383
>gi|384921134|ref|ZP_10021123.1| dihydroorotate dehydrogenase 2 [Citreicella sp. 357]
gi|384464934|gb|EIE49490.1| dihydroorotate dehydrogenase 2 [Citreicella sp. 357]
Length = 352
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 130/218 (59%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + G + VNVSSPNT LR LQ K L LL V+
Sbjct: 137 LNLGANKDSDDRAEDFARVLAACGAHLDFATVNVSSPNTEKLRDLQGKAALTALLARVMA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + P+ VKIAPDL D+A+V L V G+I +NTT+ R + L +
Sbjct: 197 ARAGAGLTL--PVFVKIAPDLDDAGLADVAEVAL--AAGVAGVIATNTTLAR-DGLRSPN 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PL +ST +++ + +LT G LP+IGVGGV SG DA+ KI+AGAS VQ+Y+
Sbjct: 252 RHEAGGLSGAPLFLRSTRVLARLSQLTDGALPLIGVGGVASGADAYAKIRAGASAVQLYS 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY G LV RI ++L+ LL ++G+ SVS AVG +
Sbjct: 312 ALVYQGLSLVPRILTDLDALLARDGFASVSDAVGTGRE 349
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ R L P+ VKIAPDL D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALTALLARVMAARAGAGLT--LPVFVKIAPDLDDAGLAD 222
Query: 118 IADVVLDS-VKGIL 130
+A+V L + V G++
Sbjct: 223 VAEVALAAGVAGVI 236
>gi|150863928|ref|XP_001382579.2| dihydroorotate dehydrogenase [Scheffersomyces stipitis CBS 6054]
gi|149385184|gb|ABN64550.2| dihydroorotate dehydrogenase [Scheffersomyces stipitis CBS 6054]
Length = 445
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 131/208 (62%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ + +L HLL +VV+ RN L
Sbjct: 228 KNKTGDEVEDYVKGVNRLGPYADVLVVNVSSPNTPGLRDLQNEKKLTHLLTSVVKERNVL 287
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYLDARYK 230
L PP+LVK+APDL+ E + IA+ D+K VDG+I+SNTT+ R E + K
Sbjct: 288 GTNLLGKKPPVLVKVAPDLTEPEIESIANSAKDAK--VDGIIISNTTIQRPAESMLTTDK 345
Query: 231 E---ETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E +TGGLSG+PL+ S + + + K TK L +IG GG+ SGKDA E KAGA+ +Q
Sbjct: 346 ELINQTGGLSGKPLKPFSLKALRILRKYTKDSDLVLIGCGGISSGKDALEFGKAGATFIQ 405
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
YTSF Y GP L +I+ EL + L+KEG
Sbjct: 406 FYTSFAYKGPGLPAKIRDELADELKKEG 433
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL---PP 101
++ G+ + G A VVNVSSPNT LR LQ + +L HLL +VV+ RN L L PP
Sbjct: 238 YVKGVNRLGPYADVLVVNVSSPNTPGLRDLQNEKKLTHLLTSVVKERNVLGTNLLGKKPP 297
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+LVK+APDL+ E + IA+ D+ V GI+
Sbjct: 298 VLVKVAPDLTEPEIESIANSAKDAKVDGII 327
>gi|209528039|ref|ZP_03276519.1| Dihydroorotate oxidase [Arthrospira maxima CS-328]
gi|209491525|gb|EDZ91900.1| Dihydroorotate oxidase [Arthrospira maxima CS-328]
Length = 388
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 128/201 (63%), Gaps = 17/201 (8%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ +L +L TV++ N A KPL +KIAPDL
Sbjct: 185 DLGDYFVVNVSSPNTPGLRSLQGSTELNEIL-TVLQQENIAASKPL---FIKIAPDL--- 237
Query: 194 EKKDIADVV-LDSKCKVDGLIVSNTTVDRYEYLDARY--------KEETGGLSGEPLRNK 244
E K I D++ L + G+I +NTT+ R + L ++ E GG+SG PLR +
Sbjct: 238 EWKAIDDIIELARTHNLAGIIATNTTISR-DNLKTQWLPQTGNPITSEAGGISGAPLRER 296
Query: 245 STELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKS 304
ST +I +++ T G++PIIGVGG+F+ +DA+EKI AGA L+Q+YT +VY GP +V R+ +
Sbjct: 297 STAVIRHIWEQTNGEIPIIGVGGIFTAEDAWEKITAGACLLQVYTGWVYEGPLMVHRLLT 356
Query: 305 ELEELLQKEGYNSVSQAVGAA 325
L + L+ G N +SQA+G A
Sbjct: 357 GLLQKLEHHGLNHISQAIGVA 377
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ +L +L TV++ N A KPL +KIAPDL
Sbjct: 185 DLGDYFVVNVSSPNTPGLRSLQGSTELNEIL-TVLQQENIAASKPL---FIKIAPDL--- 237
Query: 114 EKKDIADVV 122
E K I D++
Sbjct: 238 EWKAIDDII 246
>gi|411118766|ref|ZP_11391146.1| dihydroorotate oxidase A [Oscillatoriales cyanobacterium JSC-12]
gi|410710629|gb|EKQ68136.1| dihydroorotate oxidase A [Oscillatoriales cyanobacterium JSC-12]
Length = 386
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 16/233 (6%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
PI + +L + + D V D YFVVNVSSPNT LR LQ K QL
Sbjct: 157 PIPYPLGINLGKSKTTPLEKAAEDYVNSFRLLKDWGDYFVVNVSSPNTPGLRSLQDKAQL 216
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTV 219
+ +L+ ++ N + P+LVKIAPDL E + IADV+ L ++ G+I +NTT+
Sbjct: 217 EPILQ-ALQQENTVH----KPLLVKIAPDL---EWEAIADVLALAQAHQLAGIIATNTTI 268
Query: 220 DR-------YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
R + EETGG+SG PLR +STE+I +Y+ T+GKLPIIGVGG+F+
Sbjct: 269 RREGLKTHIVQKTGKPVTEETGGISGAPLRARSTEVIRFIYQETQGKLPIIGVGGIFTAD 328
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
DA+EKI AGASLVQ YT ++Y GP +V ++ L + L++ G S+ AVG
Sbjct: 329 DAWEKITAGASLVQTYTGWIYQGPMMVRQVLEGLLQKLEQAGLKSIQDAVGTG 381
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ K QL+ +L+ ++ N + P+LVKIAPDL
Sbjct: 190 DWGDYFVVNVSSPNTPGLRSLQDKAQLEPILQ-ALQQENTVH----KPLLVKIAPDL--- 241
Query: 114 EKKDIADVV 122
E + IADV+
Sbjct: 242 EWEAIADVL 250
>gi|260939948|ref|XP_002614274.1| hypothetical protein CLUG_05760 [Clavispora lusitaniae ATCC 42720]
gi|238852168|gb|EEQ41632.1| hypothetical protein CLUG_05760 [Clavispora lusitaniae ATCC 42720]
Length = 424
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ + +L +LL TVV R ++
Sbjct: 208 KNKTGDEVEDYVKGVQRLGPYADVLVVNVSSPNTPGLRDLQNESKLTNLLTTVVSEREKM 267
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL---DAR 228
L PP+LVK+APDLS E + IA+ KVDG+I+SNTT+ R + L D +
Sbjct: 268 GANKLGKKPPVLVKVAPDLSEPEIESIANSA--KSAKVDGIIISNTTIQRPQGLLTTDQK 325
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+TGGLSG+PL+ S + + + K TK L ++G GG+ SG+DA E KAGA+ V++
Sbjct: 326 LISQTGGLSGKPLKPLSLKALRTLRKYTKDSDLVLVGCGGISSGQDALEFGKAGATFVEL 385
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEG 314
YT+F Y GP L +I+ EL LL+KEG
Sbjct: 386 YTAFAYKGPGLPAKIRDELAVLLKKEG 412
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL---PP 101
++ G+ + G A VVNVSSPNT LR LQ + +L +LL TVV R ++ L PP
Sbjct: 218 YVKGVQRLGPYADVLVVNVSSPNTPGLRDLQNESKLTNLLTTVVSEREKMGANKLGKKPP 277
Query: 102 ILVKIAPDLSLDEKKDIAD 120
+LVK+APDLS E + IA+
Sbjct: 278 VLVKVAPDLSEPEIESIAN 296
>gi|307941485|ref|ZP_07656840.1| dihydroorotate oxidase [Roseibium sp. TrichSKD4]
gi|307775093|gb|EFO34299.1| dihydroorotate oxidase [Roseibium sp. TrichSKD4]
Length = 364
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 6/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D VKGI F A YF VN+SSPNT LR LQA+ L+ LL V++
Sbjct: 140 INVGANKDATDRIADYVKGIETFASYASYFTVNISSPNTPGLRDLQARSSLEELLSGVMD 199
Query: 170 TR---NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
R N A + +P +L+KIAPD+ DI +VVLD + VDG+IVSNTT+ R
Sbjct: 200 ARDAANGRAGRKVP-VLLKIAPDVDDIALDDICEVVLDKR--VDGMIVSNTTISRDGLKS 256
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
EE GGLSG+P+ K+T +++ K LP+IGVGG+ S + A+ KI AGA L+Q
Sbjct: 257 GAVAEEAGGLSGKPVFRKATIALAKTRKRVGADLPLIGVGGIDSAETAWTKITAGADLLQ 316
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQA 321
+Y+S VY GP L I + L + +EG S+ +A
Sbjct: 317 LYSSMVYKGPRLARDIVAGLSAKMDREGLRSLCEA 351
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR---NQLALKPLPP 101
++ GI F A YF VN+SSPNT LR LQA+ L+ LL V++ R N A + + P
Sbjct: 155 YVKGIETFASYASYFTVNISSPNTPGLRDLQARSSLEELLSGVMDARDAANGRAGRKV-P 213
Query: 102 ILVKIAPDLSLDEKKDIADVVLD 124
+L+KIAPD+ DI +VVLD
Sbjct: 214 VLLKIAPDVDDIALDDICEVVLD 236
>gi|269959029|ref|YP_003328818.1| dihydroorotate dehydrogenase [Anaplasma centrale str. Israel]
gi|269848860|gb|ACZ49504.1| dihydroorotate dehydrogenase [Anaplasma centrale str. Israel]
Length = 365
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 124/190 (65%), Gaps = 3/190 (1%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 174 LSSYITINVSSPNTAGLRDLQNRAPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 233
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET-GGLSGEPLRNKSTELISEMY 253
K DIA+ ++ K K+ GLIVSNTT D R T GGLSG PL + ST ++SEMY
Sbjct: 234 KHDIAEEIV--KHKISGLIVSNTTTDLSLLGKNRNTSITRGGLSGRPLFDLSTTVLSEMY 291
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
L K K+ +IG GGV +G A +KIKAGASLVQ+YT+ VY G +V +I EL ELL +E
Sbjct: 292 SLLKDKVVLIGCGGVSNGAQALQKIKAGASLVQLYTALVYEGFGVVKKINMELAELLTQE 351
Query: 314 GYNSVSQAVG 323
G+++V QAVG
Sbjct: 352 GFSNVEQAVG 361
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y +NVSSPNTA LR LQ + L +L +V + R + PI +KIAPD+S +
Sbjct: 174 LSSYITINVSSPNTAGLRDLQNRAPLSEILSSVRDARRSVDQAESVPIFLKIAPDISDEL 233
Query: 115 KKDIA-DVVLDSVKGIL 130
K DIA ++V + G++
Sbjct: 234 KHDIAEEIVKHKISGLI 250
>gi|354545214|emb|CCE41941.1| hypothetical protein CPAR2_804900 [Candida parapsilosis]
Length = 439
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A V+NVSSPNT LR LQ + +L +LL TVV+ RN L
Sbjct: 223 KNKTGDEVEDYVKGVSRLGPYADVLVINVSSPNTPGLRDLQNESKLTNLLTTVVKERNTL 282
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV----DRYEYLDA 227
L PPILVKIAPDL+ E IA+ + KVDG+I+SNTT+ D+ D
Sbjct: 283 QTNLLGTKPPILVKIAPDLTEPEIMSIANSA--KEAKVDGIIISNTTIQRPKDKLLTTDE 340
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGK-LPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+TGGLSG+PL+ S + + K TKG L ++G GG+ +GKDA E KAGA+ V+
Sbjct: 341 SLINQTGGLSGKPLKPLSLNALKLLNKYTKGSGLVLVGCGGISNGKDALEFAKAGATFVE 400
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP LV +I+ EL L+KEG
Sbjct: 401 LYTAFAYKGPGLVAKIRDELAAELRKEG 428
>gi|344199235|ref|YP_004783561.1| dihydroorotate dehydrogenase [Acidithiobacillus ferrivorans SS3]
gi|343774679|gb|AEM47235.1| Dihydroorotate dehydrogenase [Acidithiobacillus ferrivorans SS3]
Length = 363
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 131/210 (62%), Gaps = 10/210 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK-- 177
D + +++ + +GD Y +NVSSPNT LR LQ ++ L+ LL V +LAV+
Sbjct: 159 DDYIAALELLFHYGD---YLCINVSSPNTPGLRLLQGEEALRGLLCAVAAANQRLAVQYQ 215
Query: 178 --PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
PLP +L+KIAPDL + I + L ++ VDG I +NTT+ R E+GG
Sbjct: 216 RAPLP-LLLKIAPDLDNADLNAIGGLALGAEPLVDGFIATNTTIKRPTSQPG--LSESGG 272
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PLR +S +I+++Y+ T+G++PIIGVGG+ S DA+ KI+AGASL+Q+Y+ ++ G
Sbjct: 273 LSGAPLREQSNAVIAQLYRATQGQVPIIGVGGILSAADAYAKIQAGASLLQVYSGLIFRG 332
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
P LV I L EL K+GY ++ A G+A
Sbjct: 333 PELVREILETLPELWLKDGYPDLAHARGSA 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK----PLPPILV 104
+ +GD Y +NVSSPNT LR LQ ++ L+ LL V +LA++ PL P+L+
Sbjct: 168 LFHYGD---YLCINVSSPNTPGLRLLQGEEALRGLLCAVAAANQRLAVQYQRAPL-PLLL 223
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL + I + L +
Sbjct: 224 KIAPDLDNADLNAIGGLALGA 244
>gi|300709387|ref|YP_003735201.1| dihydroorotate dehydrogenase 2 [Halalkalicoccus jeotgali B3]
gi|448297845|ref|ZP_21487887.1| dihydroorotate dehydrogenase 2 [Halalkalicoccus jeotgali B3]
gi|299123070|gb|ADJ13409.1| dihydroorotate dehydrogenase 2 [Halalkalicoccus jeotgali B3]
gi|445578353|gb|ELY32759.1| dihydroorotate dehydrogenase 2 [Halalkalicoccus jeotgali B3]
Length = 352
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 125/196 (63%), Gaps = 14/196 (7%)
Query: 129 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAP 188
+ ++GD +FVVNVSSPNT LR LQ + L+ +L + E P+LVK++P
Sbjct: 168 LAEYGD---FFVVNVSSPNTPGLRDLQGEAHLRGILTALREAGAN-------PLLVKLSP 217
Query: 189 DLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTEL 248
DLS D VV D +DG++ +NT+ +R E L R++ ETGGLSG P+ +ST++
Sbjct: 218 DLSSGAIADAIGVVSD--LNLDGIVATNTSAERPESLRGRHRNETGGLSGRPIEPRSTDV 275
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I + T+ +PI+GVGGVF+ DA+ KI+AGASLVQ+YT VY GP + I L
Sbjct: 276 I--RFIATRTDVPIVGVGGVFTAADAYRKIRAGASLVQLYTGLVYRGPSIAKEISEGLLT 333
Query: 309 LLQKEGYNSVSQAVGA 324
LL+++G++SV +AVGA
Sbjct: 334 LLERDGFDSVEKAVGA 349
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
+ ++GD +FVVNVSSPNT LR LQ + L+ +L + E P+LVK++P
Sbjct: 168 LAEYGD---FFVVNVSSPNTPGLRDLQGEAHLRGILTALREAGAN-------PLLVKLSP 217
Query: 109 DLSLDEKKDIADVVLD-SVKGIL 130
DLS D VV D ++ GI+
Sbjct: 218 DLSSGAIADAIGVVSDLNLDGIV 240
>gi|265983474|ref|ZP_06096209.1| dihydroorotate dehydrogenase [Brucella sp. 83/13]
gi|306838312|ref|ZP_07471158.1| dihydroorotate oxidase [Brucella sp. NF 2653]
gi|264662066|gb|EEZ32327.1| dihydroorotate dehydrogenase [Brucella sp. 83/13]
gi|306406603|gb|EFM62836.1| dihydroorotate oxidase [Brucella sp. NF 2653]
Length = 364
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R +
Sbjct: 198 ARDEEGKMCTLKRPVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLKNL 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
ETGGLSG PL +ST +++ M + +P+IGVGG+ S K A KIKAGA LVQ+
Sbjct: 256 ENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAKTALAKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YT +Y GP L I L ++ EG +S+++
Sbjct: 316 YTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R++ LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGKMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|414077923|ref|YP_006997241.1| dihydroorotate dehydrogenase 2 [Anabaena sp. 90]
gi|413971339|gb|AFW95428.1| dihydroorotate dehydrogenase 2 [Anabaena sp. 90]
Length = 379
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 124/197 (62%), Gaps = 14/197 (7%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D+ YFVVNVSSPNT LR LQ L +L + + +A KP I VKIAPDL +
Sbjct: 187 DLGDYFVVNVSSPNTPGLRSLQDAAMLSQILDML--QQENIAQKP---IFVKIAPDLEWE 241
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKST 246
DI + L ++ GLI +NTT+ R E +EE GG+SG+P+R++ST
Sbjct: 242 AISDI--IALVKTYRIAGLIATNTTISREGLKTQIIEKTGKSPQEEAGGISGKPVRDRST 299
Query: 247 ELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
E+I +Y+ T+G++PIIGVGG+F+ +DA+EKI AGA L+Q YT ++Y GP +V RI L
Sbjct: 300 EVIRFIYQQTQGQMPIIGVGGIFTAEDAWEKITAGACLIQTYTGWIYEGPIMVRRILVGL 359
Query: 307 EELLQKEGYNSVSQAVG 323
L++ G S+SQA+G
Sbjct: 360 LTKLEESGLTSISQAIG 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D+ YFVVNVSSPNT LR LQ L +L + + +A K PI VKIAPDL +
Sbjct: 187 DLGDYFVVNVSSPNTPGLRSLQDAAMLSQILDML--QQENIAQK---PIFVKIAPDLEWE 241
Query: 114 EKKDIADVV 122
DI +V
Sbjct: 242 AISDIIALV 250
>gi|81299101|ref|YP_399309.1| dihydroorotate dehydrogenase 2 [Synechococcus elongatus PCC 7942]
gi|123557512|sp|Q31RJ7.1|PYRD_SYNE7 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|81167982|gb|ABB56322.1| dihydroorotate oxidase A [Synechococcus elongatus PCC 7942]
Length = 378
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 140/230 (60%), Gaps = 16/230 (6%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I +L + ++ V D V + YFVVNVSSPNT LR LQA +L+ +
Sbjct: 153 IPIGINLGKSKLTPLSGAVSDYVSSFRSLRSLGDYFVVNVSSPNTPGLRSLQAVTELEPI 212
Query: 164 LKTV-VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR- 221
L + E Q P+L+KIAPDL +E IA L + ++ G+I +NTT+D+
Sbjct: 213 LAALQAENTEQR------PLLLKIAPDLVDEEVVAIAH--LAQRQQLAGIIATNTTIDKS 264
Query: 222 ---YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
E+L R + E GG+SG PLR++STE+I +++ T+G+LPIIGVGG+FS +DA+
Sbjct: 265 LLSVEHLPGRREPLATEAGGISGAPLRSRSTEVIRLLHRTTQGQLPIIGVGGIFSAEDAW 324
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+KI AGASLVQ+YT +VY GP LV I+ L E L G +++ AVG+A
Sbjct: 325 QKIVAGASLVQVYTGWVYEGPLLVKTIQQGLLERLDSAGLPNLAAAVGSA 374
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETRNQLALKPLPPILVKIAPDLSLD 113
+ YFVVNVSSPNT LR LQA +L+ +L + E Q P+L+KIAPDL +
Sbjct: 184 LGDYFVVNVSSPNTPGLRSLQAVTELEPILAALQAENTEQR------PLLLKIAPDLVDE 237
Query: 114 EKKDIA 119
E IA
Sbjct: 238 EVVAIA 243
>gi|319405176|emb|CBI78781.1| Dihydroorotate dehydrogenase [Bartonella sp. AR 15-3]
Length = 362
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D V GI F +VA YF +NVSSPNT LR LQ +D L+ L++ + +
Sbjct: 136 VNIGANKDTVNRIDDYVSGISYFYNVADYFALNVSSPNTPGLRNLQIRDSLRFLIQAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K PI +KI+PDL+ E D+A + S DGLI+SNTT+ R D
Sbjct: 196 ARSEQKEKHGFSIPIFLKISPDLTEKELDDVAQEI--SASDFDGLIISNTTLSRRGLTDN 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R+ E GGLSG PL +ST ++++M K + IIGVGGV + A EK+KAGA L+QI
Sbjct: 254 RWATEEGGLSGHPLFERSTIVLAKMRKKLGKNIAIIGVGGVRDAQTALEKVKAGADLIQI 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ +Y GP + I E+ +L+Q++G +++
Sbjct: 314 YSGMIYEGPNIAVTIMKEILQLMQQDGTDNI 344
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F +VA YF +NVSSPNT LR LQ +D L+ L++ + + R++ K PI
Sbjct: 151 YVSGISYFYNVADYFALNVSSPNTPGLRNLQIRDSLRFLIQAISQARSEQKEKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIA 119
+KI+PDL+ E D+A
Sbjct: 211 FLKISPDLTEKELDDVA 227
>gi|126733235|ref|ZP_01748982.1| dihydroorotate dehydrogenase [Roseobacter sp. CCS2]
gi|126716101|gb|EBA12965.1| dihydroorotate dehydrogenase [Roseobacter sp. CCS2]
Length = 350
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 7/217 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D +D + + G V + VNVSSPNT LR LQ K L LL V++
Sbjct: 137 LNLGANKDSTDKAMDFATVLTRCGPVVDFATVNVSSPNTEKLRDLQGKAALAALLTGVMD 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R LA +P+P + +KIAPDL+ E ++A+V +D +I +NTT+DR E L +
Sbjct: 197 ARAALA-RPIP-VFLKIAPDLTEAEIGEVAEVA--DASGIDAIIATNTTLDR-EGLHGPH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG+PL KST +++++ T LPIIGVGGV S A++KI+AGAS VQ+YT
Sbjct: 252 QAEMGGLSGQPLFEKSTRVLTQLAGHTT--LPIIGVGGVGSADQAYQKIRAGASAVQLYT 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ VY G L I L+ LL+++G+ +V+ AVG+
Sbjct: 310 ALVYGGMSLAREIAQGLDALLKRDGFANVADAVGSGR 346
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
+ + G V + VNVSSPNT LR LQ K L LL V++ R LA +P+ P+ +KIAP
Sbjct: 156 LTRCGPVVDFATVNVSSPNTEKLRDLQGKAALAALLTGVMDARAALA-RPI-PVFLKIAP 213
Query: 109 DLSLDEKKDIADVV 122
DL+ E ++A+V
Sbjct: 214 DLTEAEIGEVAEVA 227
>gi|418054792|ref|ZP_12692848.1| Dihydroorotate dehydrogenase [Hyphomicrobium denitrificans 1NES1]
gi|353212417|gb|EHB77817.1| Dihydroorotate dehydrogenase [Hyphomicrobium denitrificans 1NES1]
Length = 362
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 136/222 (61%), Gaps = 17/222 (7%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D D +GI F VA YF VN+SSPNT LR LQA L LL V+E
Sbjct: 139 VNIGANKDSTDRPGDYARGIETFSAVASYFTVNISSPNTPGLRDLQAPAALDELLARVME 198
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCK------VDGLIVSNTTVDR 221
R ++ + PI+VKIAPD++ ++DI + C+ VDG+ VSNTT+ R
Sbjct: 199 ARTRIVSQGGSRRPIIVKIAPDIA---EQDIVPI-----CERLIVHAVDGIAVSNTTLAR 250
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
DA+ ++GGLSG PL +ST +++ +++ T GK+P+IG+GG+ +G A EKI+AG
Sbjct: 251 DGLTDAQ-ATKSGGLSGRPLFRRSTIMLARVFEATGGKIPLIGIGGIDNGDAALEKIEAG 309
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
A+L+Q+YT VY GP L++ IKS L +++ GY+ V G
Sbjct: 310 ATLLQLYTGLVYAGPGLISEIKSHLAREVRRRGYSDVGALRG 351
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+ GI F VA YF VN+SSPNT LR LQA L LL V+E R ++ + PI
Sbjct: 154 YARGIETFSAVASYFTVNISSPNTPGLRDLQAPAALDELLARVMEARTRIVSQGGSRRPI 213
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGI 129
+VKIAPD++ + I + +++ +V GI
Sbjct: 214 IVKIAPDIAEQDIVPICERLIVHAVDGI 241
>gi|83949824|ref|ZP_00958557.1| dihydroorotate dehydrogenase [Roseovarius nubinhibens ISM]
gi|83837723|gb|EAP77019.1| dihydroorotate dehydrogenase [Roseovarius nubinhibens ISM]
Length = 352
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 138/219 (63%), Gaps = 5/219 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D + + + G + VNVSSPNT LR LQ + L LL V+E
Sbjct: 137 LNLGANKDSADRADDFAQVLRRCGVHLDFATVNVSSPNTEKLRDLQGAEALARLLAGVME 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + LP + +KIAPDLS E ++A+V V +I +NTT+ R + L + +
Sbjct: 197 ARDSLG-RALP-VFLKIAPDLSDGELTELAEVA--QAGGVAAIIATNTTLGR-DGLKSAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++E GGLSG PL KST +++ + +LT+GK+P++GVGG+ S ++A+ KI+AGAS VQ+Y+
Sbjct: 252 RDEAGGLSGAPLFEKSTRILARLSQLTEGKMPLVGVGGISSAEEAYAKIRAGASAVQLYS 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ VY G L R+ L++LL K+G+ V+ AVG ++
Sbjct: 312 ALVYEGLSLAGRVAQGLDDLLAKDGFAHVADAVGTGREA 350
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V+E R+ L + L P+ +KIAPDLS E +
Sbjct: 165 FATVNVSSPNTEKLRDLQGAEALARLLAGVMEARDSLG-RAL-PVFLKIAPDLSDGELTE 222
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVS 144
+A+V + G VA N +
Sbjct: 223 LAEVA--------QAGGVAAIIATNTT 241
>gi|261315439|ref|ZP_05954636.1| dihydroorotate dehydrogenase [Brucella pinnipedialis M163/99/10]
gi|261304465|gb|EEY07962.1| dihydroorotate dehydrogenase [Brucella pinnipedialis M163/99/10]
Length = 364
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 8/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TR----NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
R N +K P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R
Sbjct: 198 ARDEEGNMCTLKR--PVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLK 253
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LV
Sbjct: 254 NPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Q+YT +Y GP L I L ++ EG +S+++
Sbjct: 314 QLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR----NQLALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R N LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|329890617|ref|ZP_08268960.1| dihydroorotate oxidase [Brevundimonas diminuta ATCC 11568]
gi|328845918|gb|EGF95482.1| dihydroorotate oxidase [Brevundimonas diminuta ATCC 11568]
Length = 345
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 133/230 (57%), Gaps = 11/230 (4%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA +P + A +L KD D D V G+ + +A YF VN+SSPNT LR
Sbjct: 123 RLARRP-----TRTAIGANLGANKDTEDKAADYVAGLRRLAGLADYFTVNISSPNTPGLR 177
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ ++ L LL + E R P+ +KIAPDL +E I + + ++D L
Sbjct: 178 ALQGREALDDLLGRIHEARPADGA----PVFLKIAPDLIGEEIGMIVEASI--AHRIDAL 231
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
IVSNTT++R L + YK E GGLSG PL+ + + + + G+LP+I VGG+ G
Sbjct: 232 IVSNTTLERPASLRSAYKGEAGGLSGAPLKPFAQKAVEAAAEAAGGRLPLIAVGGIADGA 291
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAV 322
DA+ +I+AGAS VQ+Y++ +Y GP +V RIK +L L+ +G+ S+++A
Sbjct: 292 DAYARIRAGASAVQVYSALIYEGPGMVGRIKRDLAARLRADGFASMAEAT 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ + +A YF VN+SSPNT LR LQ ++ L LL + E R P+ +
Sbjct: 150 YVAGLRRLAGLADYFTVNISSPNTPGLRALQGREALDDLLGRIHEARPADGA----PVFL 205
Query: 105 KIAPDLSLDE 114
KIAPDL +E
Sbjct: 206 KIAPDLIGEE 215
>gi|23501218|ref|NP_697345.1| dihydroorotate dehydrogenase 2 [Brucella suis 1330]
gi|148560177|ref|YP_001258348.1| dihydroorotate dehydrogenase 2 [Brucella ovis ATCC 25840]
gi|161618293|ref|YP_001592180.1| dihydroorotate dehydrogenase 2 [Brucella canis ATCC 23365]
gi|163842597|ref|YP_001627001.1| dihydroorotate dehydrogenase 2 [Brucella suis ATCC 23445]
gi|225626838|ref|ZP_03784877.1| dihydroorotate oxidase [Brucella ceti str. Cudo]
gi|256368771|ref|YP_003106277.1| dihydroorotate dehydrogenase 2 [Brucella microti CCM 4915]
gi|260567069|ref|ZP_05837539.1| dihydroorotate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261221533|ref|ZP_05935814.1| dihydroorotate dehydrogenase [Brucella ceti B1/94]
gi|261316996|ref|ZP_05956193.1| dihydroorotate dehydrogenase [Brucella pinnipedialis B2/94]
gi|261324450|ref|ZP_05963647.1| dihydroorotate dehydrogenase [Brucella neotomae 5K33]
gi|261751664|ref|ZP_05995373.1| dihydroorotate dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261754318|ref|ZP_05998027.1| dihydroorotate dehydrogenase [Brucella suis bv. 3 str. 686]
gi|261757553|ref|ZP_06001262.1| dihydroorotate dehydrogenase [Brucella sp. F5/99]
gi|265988033|ref|ZP_06100590.1| dihydroorotate dehydrogenase [Brucella pinnipedialis M292/94/1]
gi|265997496|ref|ZP_06110053.1| dihydroorotate dehydrogenase [Brucella ceti M490/95/1]
gi|294851699|ref|ZP_06792372.1| dihydroorotate oxidase [Brucella sp. NVSL 07-0026]
gi|340789957|ref|YP_004755421.1| dihydroorotate dehydrogenase 2 [Brucella pinnipedialis B2/94]
gi|376274923|ref|YP_005115362.1| dihydroorotate oxidase [Brucella canis HSK A52141]
gi|376280007|ref|YP_005154013.1| dihydroorotate dehydrogenase 2 [Brucella suis VBI22]
gi|384224001|ref|YP_005615165.1| dihydroorotate dehydrogenase 2 [Brucella suis 1330]
gi|81847184|sp|Q8G2K8.1|PYRD_BRUSU RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|166199339|sp|A5VNQ1.1|PYRD_BRUO2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|189038418|sp|A9M7Z9.1|PYRD_BRUC2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|189038419|sp|B0CJU0.1|PYRD_BRUSI RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|23347099|gb|AAN29260.1| dihydroorotate dehydrogenase [Brucella suis 1330]
gi|148371434|gb|ABQ61413.1| dihydroorotate oxidase [Brucella ovis ATCC 25840]
gi|161335104|gb|ABX61409.1| dihydroorotate oxidase [Brucella canis ATCC 23365]
gi|163673320|gb|ABY37431.1| dihydroorotate oxidase [Brucella suis ATCC 23445]
gi|225618495|gb|EEH15538.1| dihydroorotate oxidase [Brucella ceti str. Cudo]
gi|255998929|gb|ACU47328.1| dihydroorotate dehydrogenase [Brucella microti CCM 4915]
gi|260156587|gb|EEW91667.1| dihydroorotate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260920117|gb|EEX86770.1| dihydroorotate dehydrogenase [Brucella ceti B1/94]
gi|261296219|gb|EEX99715.1| dihydroorotate dehydrogenase [Brucella pinnipedialis B2/94]
gi|261300430|gb|EEY03927.1| dihydroorotate dehydrogenase [Brucella neotomae 5K33]
gi|261737537|gb|EEY25533.1| dihydroorotate dehydrogenase [Brucella sp. F5/99]
gi|261741417|gb|EEY29343.1| dihydroorotate dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261744071|gb|EEY31997.1| dihydroorotate dehydrogenase [Brucella suis bv. 3 str. 686]
gi|262551964|gb|EEZ07954.1| dihydroorotate dehydrogenase [Brucella ceti M490/95/1]
gi|264660230|gb|EEZ30491.1| dihydroorotate dehydrogenase [Brucella pinnipedialis M292/94/1]
gi|294820288|gb|EFG37287.1| dihydroorotate oxidase [Brucella sp. NVSL 07-0026]
gi|340558415|gb|AEK53653.1| dihydroorotate dehydrogenase 2 [Brucella pinnipedialis B2/94]
gi|343382181|gb|AEM17673.1| dihydroorotate dehydrogenase 2 [Brucella suis 1330]
gi|358257606|gb|AEU05341.1| dihydroorotate dehydrogenase 2 [Brucella suis VBI22]
gi|363403490|gb|AEW13785.1| dihydroorotate oxidase [Brucella canis HSK A52141]
Length = 364
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 8/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TR----NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
R N +K P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R
Sbjct: 198 ARDEEGNMCTLKR--PVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLK 253
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LV
Sbjct: 254 NPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Q+YT +Y GP L I L ++ EG +S+++
Sbjct: 314 QLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR----NQLALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R N LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|159184334|ref|NP_353514.2| dihydroorotate dehydrogenase [Agrobacterium fabrum str. C58]
gi|167011965|sp|A9CK85.1|PYRD_AGRT5 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|159139650|gb|AAK86299.2| dihydroorotate dehydrogenase [Agrobacterium fabrum str. C58]
Length = 363
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDSEDRIADYVQGIEAFYAVASYFTVNISSPNTPGLRDLQARESLAALLTAVLE 197
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A + PI +KIAPDL+ + D+A+ L +DGLIVSNTT+ R
Sbjct: 198 RRKTEAERLGKRIPIFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSREGLRPG 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
++ E GGLSG+PL ST ++++M + LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 PHRGEAGGLSGKPLFELSTTVLAKMRRRVGANLPIIGVGGVSSAETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L + I + +L+ +EG ++
Sbjct: 316 YSCMVYEGPGLPSAIVKGMSKLVAREGVETI 346
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E R A L PI
Sbjct: 153 YVQGIEAFYAVASYFTVNISSPNTPGLRDLQARESLAALLTAVLERRKTEAERLGKRIPI 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + D+A+ L
Sbjct: 213 FLKIAPDLTEEGLDDVAEEAL 233
>gi|433777115|ref|YP_007307582.1| dihydroorotate dehydrogenase, subfamily 2 [Mesorhizobium
australicum WSM2073]
gi|433669130|gb|AGB48206.1| dihydroorotate dehydrogenase, subfamily 2 [Mesorhizobium
australicum WSM2073]
Length = 359
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D G+ +F A Y VN+SSPNT LR +QA++QL LL V
Sbjct: 138 VNIGANKDSTDRVGDYESGVSRFAPYASYLTVNISSPNTPGLRTMQAREQLGELLSRVRA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + +P PI +KIAPDL E +DIA V++ + +DG+IVSNTT+ R
Sbjct: 198 ARTAASAQP--PIFLKIAPDLVEAELEDIAAEVIEKQ--IDGIIVSNTTISRPALRSDDA 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG+PL +ST +++ M KL ++ IIGVGGV S + A EKI+AGA LVQ+YT
Sbjct: 254 ARETGGLSGKPLFERSTIVLARMRKLLGPEMAIIGVGGVNSMETALEKIRAGADLVQLYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
+Y GP L RI + + + E S+ +
Sbjct: 314 GMIYGGPALPGRIVAGMARFAETEKLKSMRE 344
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ +F A Y VN+SSPNT LR +QA++QL LL V R + + PPI +KIA
Sbjct: 156 GVSRFAPYASYLTVNISSPNTPGLRTMQAREQLGELLSRVRAARTAASAQ--PPIFLKIA 213
Query: 108 PDLSLDEKKDI-ADVVLDSVKGIL 130
PDL E +DI A+V+ + GI+
Sbjct: 214 PDLVEAELEDIAAEVIEKQIDGII 237
>gi|56751231|ref|YP_171932.1| dihydroorotate dehydrogenase 2 [Synechococcus elongatus PCC 6301]
gi|73913701|sp|Q5N2Q8.1|PYRD_SYNP6 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|56686190|dbj|BAD79412.1| dihydroorotate dehydrogenase [Synechococcus elongatus PCC 6301]
Length = 378
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 140/230 (60%), Gaps = 16/230 (6%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I +L + ++ V D V + YFVVNVSSPNT LR LQA +L+ +
Sbjct: 153 IPIGINLGKSKLTPLSGAVSDYVSSFRSLRSLGDYFVVNVSSPNTPGLRSLQAVTELEPI 212
Query: 164 LKTV-VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR- 221
L + E Q P+L+KIAPDL +E IA L + ++ G+I +NTT+D+
Sbjct: 213 LAALQAENTEQR------PLLLKIAPDLVDEEVVAIAH--LAQRQQLAGIIATNTTIDKS 264
Query: 222 ---YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
E+L R + E GG+SG PLR++STE+I +++ T+G+LPIIGVGG+FS +DA+
Sbjct: 265 LLSVEHLPGRREPLATEAGGISGAPLRSRSTEVIRLLHRTTQGQLPIIGVGGIFSAEDAW 324
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+KI AGASLVQ+YT +VY GP LV I+ L E L G +++ AVG+A
Sbjct: 325 QKIVAGASLVQVYTGWVYEGPLLVKTIQQGLLERLDSAGLPNLAAAVGSA 374
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETRNQLALKPLPPILVKIAPDLSLD 113
+ YFVVNVSSPNT LR LQA +L+ +L + E Q P+L+KIAPDL +
Sbjct: 184 LGDYFVVNVSSPNTPGLRSLQAVTELEPILAALQAENTEQR------PLLLKIAPDLVDE 237
Query: 114 EKKDIA 119
E IA
Sbjct: 238 EVVAIA 243
>gi|108763431|ref|YP_631237.1| dihydroorotate dehydrogenase 2 [Myxococcus xanthus DK 1622]
gi|123247813|sp|Q1D7Y6.1|PYRD_MYXXD RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|108467311|gb|ABF92496.1| dihydroorotate oxidase [Myxococcus xanthus DK 1622]
Length = 363
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 133/222 (59%), Gaps = 12/222 (5%)
Query: 110 LSLDEKKD--IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + V D V + + Y VVN SSPNT LRKLQ +QL LL V
Sbjct: 144 VNIGKNKDTPLEQAVDDYVACVDALAPLGDYVVVNASSPNTPGLRKLQEPEQLGQLLGAV 203
Query: 168 VETRNQLA-VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYL 225
E +LA V P P+ +KIAPDLS + ++ DV K+ GLI +NTTV R +E+
Sbjct: 204 QE---RLATVAPGKPLFLKIAPDLSPEAVDEVVDVA--RAQKLAGLIATNTTVARPFEHP 258
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
A+ E GGLSG P+R + +I + + G LPIIGVGGVF+ +D +EK++AGAS+V
Sbjct: 259 LAK---EAGGLSGAPVREPANAVIRRAWLRSGGALPIIGVGGVFTAQDVYEKLRAGASVV 315
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Q+YT F+Y GP +V I L LL ++GY V +GA H+
Sbjct: 316 QVYTGFIYEGPGMVGNILPTLATLLARDGYKQVRDVIGAEHR 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y VVN SSPNT LRKLQ +QL LL V E +A P P+ +KIAPDLS + +
Sbjct: 174 YVVVNASSPNTPGLRKLQEPEQLGQLLGAVQERLATVA--PGKPLFLKIAPDLSPEAVDE 231
Query: 118 IADVV 122
+ DV
Sbjct: 232 VVDVA 236
>gi|395782128|ref|ZP_10462533.1| dihydroorotate dehydrogenase [Bartonella rattimassiliensis 15908]
gi|395419618|gb|EJF85916.1| dihydroorotate dehydrogenase [Bartonella rattimassiliensis 15908]
Length = 360
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D GI F D+A YF VN+SSPNT LR LQA++ L LL ++ +
Sbjct: 136 VNIGANKDTVNKIDDYTVGIAHFYDIADYFTVNISSPNTPGLRDLQARNNLHLLLSSISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS E D+A+ + S DGLIVSNTT+ R + +
Sbjct: 196 ARNEQKKKHGFSIPIFLKIAPDLSEQELDDVAEEIKLSD--FDGLIVSNTTLSRQDLNNN 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R+ E GGLSG PL +ST ++++M + ++ IIGVGGV + + A EKIKAGA L+Q+
Sbjct: 254 RFSNEEGGLSGYPLFKRSTIVLAKMRQKLGKEIAIIGVGGVKNAQTALEKIKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ +++Q+ G +++
Sbjct: 314 YSGMVYEGPNLAITILKEILQMMQQAGVDNI 344
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ +GI F D+A YF VN+SSPNT LR LQA++ L LL ++ + RN+ K PI
Sbjct: 151 YTVGIAHFYDIADYFTVNISSPNTPGLRDLQARNNLHLLLSSISQARNEQKKKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDLS E D+A+ +
Sbjct: 211 FLKIAPDLSEQELDDVAEEI 230
>gi|15805528|ref|NP_294224.1| dihydroorotate dehydrogenase 2 [Deinococcus radiodurans R1]
gi|9297053|sp|Q9RX14.1|PYRD_DEIRA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|6458191|gb|AAF10081.1|AE001909_3 dihydroorotate dehydrogenase [Deinococcus radiodurans R1]
Length = 369
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 135/206 (65%), Gaps = 5/206 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D K + GD+A FVVNVSSPNT LR LQA D L L++ V++ V+ L
Sbjct: 165 DAAEDYRKCVRALGDLADAFVVNVSSPNTPGLRALQAADDLAALVRAVLDEVEAGRVRTL 224
Query: 180 --PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLS 237
PP+LVK+APDL + + VLD+ GLI+SNTT+ R L +E+ GGLS
Sbjct: 225 RRPPVLVKLAPDLHPADFEASVGAVLDAGAS--GLIISNTTLSRGG-LSHPNREQAGGLS 281
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PL ++STEL+ + Y+LT+G++PI+GVGGVFS +DA+ K+ AGA LV++Y++ +Y GP
Sbjct: 282 GRPLTDRSTELVRDAYRLTRGQVPIVGVGGVFSAEDAYAKLLAGADLVEVYSALIYRGPG 341
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVG 323
LV I + L +LL+++G +++ VG
Sbjct: 342 LVREINAGLVKLLERDGVRNIADVVG 367
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKI 106
+ GD+A FVVNVSSPNT LR LQA D L L++ V++ ++ L PP+LVK+
Sbjct: 174 VRALGDLADAFVVNVSSPNTPGLRALQAADDLAALVRAVLDEVEAGRVRTLRRPPVLVKL 233
Query: 107 APDLSLDEKKDIADVVLDS 125
APDL + + VLD+
Sbjct: 234 APDLHPADFEASVGAVLDA 252
>gi|164657532|ref|XP_001729892.1| hypothetical protein MGL_2878 [Malassezia globosa CBS 7966]
gi|159103786|gb|EDP42678.1| hypothetical protein MGL_2878 [Malassezia globosa CBS 7966]
Length = 665
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 5/198 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V+D VKG+ G A V+NVSSPNT LR+LQ + L+ +L+ VV R+ +A + +
Sbjct: 274 DSVVDYVKGVQALGAYADMLVINVSSPNTPGLRRLQRRSVLEGVLRDVVTARDDVAKQRI 333
Query: 180 P--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYLDARYKEETGGL 236
P++VK+APDLS E +D+AD SK +DG+IVSNTTV R L ++ E GGL
Sbjct: 334 DSLPLVVKVAPDLSDAELEDVADAARASK--IDGIIVSNTTVSRPAGLLSTQHVHEAGGL 391
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG P++ + + +YK ++GK+P+IG GG+ + +DA E +AGAS VQ+YT+ Y GP
Sbjct: 392 SGPPVKPLALHALQVIYKRSEGKIPLIGCGGIMTAEDALEFARAGASAVQLYTALAYRGP 451
Query: 297 PLVTRIKSELEELLQKEG 314
L RIK +L L+ EG
Sbjct: 452 GLPRRIKDDLAARLRAEG 469
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ G+ G A V+NVSSPNT LR+LQ + L+ +L+ VV R+ +A + + P+
Sbjct: 279 YVKGVQALGAYADMLVINVSSPNTPGLRRLQRRSVLEGVLRDVVTARDDVAKQRIDSLPL 338
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+VK+APDLS E +D+AD S + GI+
Sbjct: 339 VVKVAPDLSDAELEDVADAARASKIDGII 367
>gi|427709196|ref|YP_007051573.1| dihydroorotate oxidase A [Nostoc sp. PCC 7107]
gi|427361701|gb|AFY44423.1| dihydroorotate oxidase A [Nostoc sp. PCC 7107]
Length = 402
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 140/213 (65%), Gaps = 19/213 (8%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ L+S + + + GD YFVVNVSSPNT LR LQ L +L V++T N
Sbjct: 198 AEDYLNSFRLLKELGD---YFVVNVSSPNTPGLRSLQDAAMLSSILD-VLQTENTTH--- 250
Query: 179 LPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR----YEYLDARYK--- 230
P+ VKIAPDL E + IAD++ L ++ G+I +NTT+ R + +D K
Sbjct: 251 -KPVFVKIAPDL---EWEAIADIIGLAKTYQLAGIIATNTTISRDGLKTQLIDQTGKPPQ 306
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+E GG+SG PLR++STE+I +++ T+G++PIIGVGG+FS +DA+EKI AGASL+Q+YT
Sbjct: 307 DEAGGISGAPLRDRSTEVIKFIWQQTQGQIPIIGVGGIFSPEDAWEKITAGASLIQVYTG 366
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
++Y GP +V+RI + L L++ NS+++AVG
Sbjct: 367 WIYEGPMMVSRILNGLLSKLEQNKLNSITEAVG 399
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ L +L V++T N P+ VKIAPDL
Sbjct: 210 ELGDYFVVNVSSPNTPGLRSLQDAAMLSSILD-VLQTENTTH----KPVFVKIAPDL--- 261
Query: 114 EKKDIADVV 122
E + IAD++
Sbjct: 262 EWEAIADII 270
>gi|282899610|ref|ZP_06307574.1| Dihydroorotate dehydrogenase 2 [Cylindrospermopsis raciborskii
CS-505]
gi|281195489|gb|EFA70422.1| Dihydroorotate dehydrogenase 2 [Cylindrospermopsis raciborskii
CS-505]
Length = 379
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 18/210 (8%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L S + + GD YFVVNVSSPNT LR LQ + L +L+ V++T N +P P+
Sbjct: 176 LQSFRLLKSLGD---YFVVNVSSPNTPGLRSLQDRPMLSQILE-VIQTENSTQNQP-KPL 230
Query: 183 LVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDRYEYLDARYKEETG------- 234
VKIAPDL E + I D++ L K+ G+I +NTT+ R E L + E+TG
Sbjct: 231 FVKIAPDL---EWEAIVDIINLAKTYKLAGIIATNTTISR-EGLKTQVIEKTGNPPQAEP 286
Query: 235 -GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
G+SG PLR STE+I +YK ++G++PIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y
Sbjct: 287 GGISGLPLRQPSTEIIRFIYKQSQGQIPIIGVGGIFTAEDAWEKITAGASLIQVYTGWIY 346
Query: 294 HGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GP + +R+ + L LQ G S+ AVG
Sbjct: 347 EGPMMASRVLTGLLAKLQNHGLGSIGDAVG 376
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+ YFVVNVSSPNT LR LQ + L +L+ V++T N +P P+ VKIAPDL +
Sbjct: 185 LGDYFVVNVSSPNTPGLRSLQDRPMLSQILE-VIQTENSTQNQP-KPLFVKIAPDLEWEA 242
Query: 115 KKDIADVV 122
DI ++
Sbjct: 243 IVDIINLA 250
>gi|425454269|ref|ZP_18834015.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9807]
gi|389805106|emb|CCI15327.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9807]
Length = 382
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 126/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I ++ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 RTIIELAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYQQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEANGLTNINQAVG 376
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+ I ++ Y + + + NT R L K + E ++
Sbjct: 244 RTIIELAFS-------------YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
+PL
Sbjct: 291 GQPL 294
>gi|68464889|ref|XP_723522.1| hypothetical protein CaO19.4836 [Candida albicans SC5314]
gi|68465266|ref|XP_723332.1| hypothetical protein CaO19.12299 [Candida albicans SC5314]
gi|51701806|sp|Q874I4.1|PYRD_CANAL RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOD; Short=DHODase;
Short=DHOdehase; AltName: Full=Dihydroorotate oxidase;
Flags: Precursor
gi|29469902|gb|AAO74621.1| dihydroorotate dehydrogenase precursor [Candida albicans]
gi|30959413|gb|AAP39962.1| dihydroorotate dehydrogenase [Candida albicans]
gi|46445359|gb|EAL04628.1| hypothetical protein CaO19.12299 [Candida albicans SC5314]
gi|46445556|gb|EAL04824.1| hypothetical protein CaO19.4836 [Candida albicans SC5314]
gi|238878616|gb|EEQ42254.1| dihydroorotate dehydrogenase, mitochondrial precursor [Candida
albicans WO-1]
Length = 444
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 137/221 (61%), Gaps = 11/221 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A V+NVSSPNT LR LQ++ +L +LL TVV+ RN L
Sbjct: 227 KNKFGDEVNDYVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLTTVVKERNVL 286
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT----VDRYEYLDA 227
L PP+LVK+APDL+ E + IA+ + KVDG+I+SNTT VDR D
Sbjct: 287 GKNLLGNKPPVLVKVAPDLTEPEIESIANSA--KEAKVDGIIISNTTIQRPVDRLLTTDK 344
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ + GGLSG+PL+ S + + + K TK L +IG GG+ +GKDA E KAGA+ ++
Sbjct: 345 QLINQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFIE 404
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT+F Y GP LV +I+ EL E L+KEG + Q +G+ K
Sbjct: 405 LYTAFAYKGPGLVGKIRDELAEELRKEG-KTWEQIIGSDDK 444
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 21/145 (14%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---LKPLPP 101
++ G+ + G A V+NVSSPNT LR LQ++ +L +LL TVV+ RN L L PP
Sbjct: 237 YVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLTTVVKERNVLGKNLLGNKPP 296
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
+LVK+APDL+ E + IA+ ++ V GI+ +N + D+L
Sbjct: 297 VLVKVAPDLTEPEIESIANSAKEAKVDGII-----------------ISNTTIQRPVDRL 339
Query: 161 KHLLKTVVETRNQLAVKPLPPILVK 185
K ++ L+ KPL P+ +K
Sbjct: 340 LTTDKQLINQAGGLSGKPLKPLSLK 364
>gi|306842421|ref|ZP_07475073.1| dihydroorotate oxidase [Brucella sp. BO2]
gi|306287443|gb|EFM58920.1| dihydroorotate oxidase [Brucella sp. BO2]
Length = 364
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R +
Sbjct: 198 ARDEEGKMCTLKRPVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLKNP 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LVQ+
Sbjct: 256 ENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YT +Y GP L I L ++ EG +SV++
Sbjct: 316 YTGLIYRGPGLPGEILRGLSTAIKHEGVSSVAE 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R++ LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGKMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|434397908|ref|YP_007131912.1| dihydroorotate oxidase A [Stanieria cyanosphaera PCC 7437]
gi|428269005|gb|AFZ34946.1| dihydroorotate oxidase A [Stanieria cyanosphaera PCC 7437]
Length = 377
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 14/211 (6%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D ++ L ++A YFVVNVSSPNT LR+LQA +QL+ +L T+ Q A + PIL
Sbjct: 174 DYLESFLMLNELADYFVVNVSSPNTPGLRQLQASEQLEPILSTL-----QTANESQKPIL 228
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGL 236
+KIAPDL + + D+V ++ G++ SNTT+ R K+E GG+
Sbjct: 229 IKIAPDLDWEAVTKVIDLV--KTYRLAGIVASNTTIRRDGLKTSIVPATGNHIKDEAGGI 286
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG P++ +STE+I +++ T G +PIIGVGG+F+ +DA+EKI AGASL+Q+YT +VY GP
Sbjct: 287 SGAPVKQRSTEIIRFIWQQTNGSIPIIGVGGIFNAEDAWEKIIAGASLLQVYTGWVYEGP 346
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
LV + + L L + +S AVG H+
Sbjct: 347 WLVPNVLNGLLTKLNRYNLPDISAAVGLEHR 377
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L L ++A YFVVNVSSPNT LR+LQA +QL+ +L T+ Q A + PIL+
Sbjct: 175 YLESFLMLNELADYFVVNVSSPNTPGLRQLQASEQLEPILSTL-----QTANESQKPILI 229
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDL + + D+V
Sbjct: 230 KIAPDLDWEAVTKVIDLV 247
>gi|255710791|ref|XP_002551679.1| KLTH0A05104p [Lachancea thermotolerans]
gi|238933056|emb|CAR21237.1| KLTH0A05104p [Lachancea thermotolerans CBS 6340]
Length = 439
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 14/208 (6%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN------ 172
D V D +KG+ F +A V+NVSSPNT LR LQ + +L LL+ VV+ RN
Sbjct: 222 GDEVQDYLKGVETFQSLADVLVINVSSPNTPGLRDLQNESKLADLLQKVVDKRNSLVDAG 281
Query: 173 -QLAVKP-LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL---DA 227
QL K PP+LVKIAPDL+ E IA+ K KVDG+IVSNTT+ R L D
Sbjct: 282 NQLGAKAHKPPVLVKIAPDLTEPELLSIAEAA--KKSKVDGIIVSNTTIQRPNSLITQDP 339
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
K +TGGLSG+PL+ S + + +YK TK L +IG GG+ S +DA E +AGA+ VQ
Sbjct: 340 EVKFQTGGLSGKPLKQYSLKALRTIYKYTKDSDLVLIGCGGISSAQDALEYARAGATFVQ 399
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YTSF Y GP +V++IK L E L++EG
Sbjct: 400 LYTSFAYKGPGVVSKIKDGLTEELKREG 427
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL------- 94
+Q +L G+ F +A V+NVSSPNT LR LQ + +L LL+ VV+ RN L
Sbjct: 225 VQDYLKGVETFQSLADVLVINVSSPNTPGLRDLQNESKLADLLQKVVDKRNSLVDAGNQL 284
Query: 95 -ALKPLPPILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
A PP+LVKIAPDL+ E IA+ S V GI+
Sbjct: 285 GAKAHKPPVLVKIAPDLTEPELLSIAEAAKKSKVDGII 322
>gi|397631085|gb|EJK70020.1| hypothetical protein THAOC_08660 [Thalassiosira oceanica]
Length = 465
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 8/188 (4%)
Query: 141 VNVSSPNTANL----RKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKK 196
VN+ T N+ R LQ KD L++LL+ ++ R+ A P + VKIAPDLS DE K
Sbjct: 251 VNLGKNKTPNISEAVRSLQQKDPLQNLLEATIKARDDFA--PHAHLFVKIAPDLSKDEMK 308
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
D+A VVL++ +DG+IV NTT R E L ++ K E+GGLSG PL++ ST+ I +MYKLT
Sbjct: 309 DVAAVVLETG--IDGMIVCNTTNSRPESLLSQNKVESGGLSGAPLKDISTQCIRQMYKLT 366
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
G++PIIGVGGV SG+DA+EK+KAGASLVQIY+ VY GP +V+RI+ EL LL + GY
Sbjct: 367 NGQVPIIGVGGVGSGRDAYEKLKAGASLVQIYSMMVYEGPGVVSRIRHELATLLAENGYK 426
Query: 317 SVSQAVGA 324
+V VGA
Sbjct: 427 NVDDVVGA 434
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 61 VNVSSPNTANL----RKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKK 116
VN+ T N+ R LQ KD L++LL+ ++ R+ A P + VKIAPDLS DE K
Sbjct: 251 VNLGKNKTPNISEAVRSLQQKDPLQNLLEATIKARDDFA--PHAHLFVKIAPDLSKDEMK 308
Query: 117 DIADVVLDS 125
D+A VVL++
Sbjct: 309 DVAAVVLET 317
>gi|198284018|ref|YP_002220339.1| dihydroorotate oxidase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665995|ref|YP_002426662.1| dihydroorotate dehydrogenase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226724726|sp|B7J5Q1.1|PYRD_ACIF2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|226724727|sp|B5EL46.1|PYRD_ACIF5 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|198248539|gb|ACH84132.1| Dihydroorotate oxidase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518208|gb|ACK78794.1| dihydroorotate dehydrogenase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 363
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 8/199 (4%)
Query: 129 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV---KPLPPILVK 185
+ +GD Y +NVSSPNT LR LQ ++ L+ LLK V +LA+ +P P+L+K
Sbjct: 168 LFHYGD---YLCINVSSPNTPGLRLLQGEEALRGLLKAVAAANQRLALQHQRPPLPLLLK 224
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKS 245
IAPDL D+ I + L + V+G I +NTT++R E+GGLSG PL +S
Sbjct: 225 IAPDLDNDDLNAIGSLALGTAPLVNGFIATNTTIERPASQPG--LSESGGLSGAPLLQQS 282
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
+I+++Y+ T+G++PIIGVGG+ S DA+ KI AGASLVQ+Y+ ++ GP LV I E
Sbjct: 283 NAVIAQLYRATQGQVPIIGVGGILSAADAYAKILAGASLVQVYSGLIFRGPGLVREILEE 342
Query: 306 LEELLQKEGYNSVSQAVGA 324
L L K+GY ++ A G+
Sbjct: 343 LPGLWLKDGYPDLAHARGS 361
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL---KPLPPILVK 105
+ +GD Y +NVSSPNT LR LQ ++ L+ LLK V +LAL +P P+L+K
Sbjct: 168 LFHYGD---YLCINVSSPNTPGLRLLQGEEALRGLLKAVAAANQRLALQHQRPPLPLLLK 224
Query: 106 IAPDLSLDEKKDIADVVLDSVKGILKF 132
IAPDL D+ I + L + + F
Sbjct: 225 IAPDLDNDDLNAIGSLALGTAPLVNGF 251
>gi|296532362|ref|ZP_06895095.1| dihydroorotate oxidase [Roseomonas cervicalis ATCC 49957]
gi|296267312|gb|EFH13204.1| dihydroorotate oxidase [Roseomonas cervicalis ATCC 49957]
Length = 353
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A Y +NVSSPNT LR LQ + +L +L V TR + +P P+LVKIAPDL+ +
Sbjct: 166 ADYVTINVSSPNTPGLRDLQGEAKLAAILAAVAATRAEQPRQP--PVLVKIAPDLAEEAV 223
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
+ + + + V GLIVSNTT+ R L + +K ETGGLSG+PL ST L+ +Y L
Sbjct: 224 PSLVETCVANG--VAGLIVSNTTIARPASLRSAHKGETGGLSGQPLFEPSTALLRRVYGL 281
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
G+L +IG GGV +G A+ KI+AGA+LVQ+Y +F Y GP LV RIK EL LL+++G+
Sbjct: 282 AAGRLVLIGCGGVSNGAQAYAKIRAGAALVQMYAAFAYAGPVLVPRIKRELAALLRRDGF 341
Query: 316 NSVSQAVGA 324
V +AVGA
Sbjct: 342 AHVHEAVGA 350
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +NVSSPNT LR LQ + +L +L V TR + + PP+LVKIAPDL+ +
Sbjct: 166 ADYVTINVSSPNTPGLRDLQGEAKLAAILAAVAATRAEQPRQ--PPVLVKIAPDLAEEAV 223
Query: 116 KDIADV-VLDSVKGIL 130
+ + V + V G++
Sbjct: 224 PSLVETCVANGVAGLI 239
>gi|414176351|ref|ZP_11430580.1| dihydroorotate dehydrogenase [Afipia broomeae ATCC 49717]
gi|410886504|gb|EKS34316.1| dihydroorotate dehydrogenase [Afipia broomeae ATCC 49717]
Length = 364
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 130/213 (61%), Gaps = 6/213 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD D D V+ I F VA YF VNVSSPNT LR LQ L LL VV+ R ++
Sbjct: 143 NKDSMDRTADYVRLIELFAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVVDARERV 202
Query: 175 AVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--DARYKE 231
P+L+KIAPDL+L E D+ + +VDG+IV+NTT+ R L AR KE
Sbjct: 203 RKNAGDSPLLLKIAPDLTLQELDDVVHIA--RSRRVDGMIVANTTLARPASLREQARAKE 260
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
+ GGLSG PL ST +++E Y +G P+IGVGG+ SG A KI+AGA+L+Q+Y+S
Sbjct: 261 Q-GGLSGRPLLRLSTRMVAETYVRAEGAFPLIGVGGIDSGGAALMKIRAGATLIQLYSSL 319
Query: 292 VYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y G LV IK++L L++ +S+S+ VGA
Sbjct: 320 IYKGLGLVEDIKADLVSTLRRTSRDSLSEIVGA 352
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIAPDL 110
F VA YF VNVSSPNT LR LQ L LL VV+ R ++ P+L+KIAPDL
Sbjct: 160 FAPVASYFTVNVSSPNTPGLRNLQQAAALDDLLARVVDARERVRKNAGDSPLLLKIAPDL 219
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
+L E LD V I + V V N + A+LR + +AK+Q
Sbjct: 220 TLQE--------LDDVVHIARSRRVDGMIVANTTLARPASLREQARAKEQ 261
>gi|427420555|ref|ZP_18910738.1| dihydroorotate oxidase A [Leptolyngbya sp. PCC 7375]
gi|425756432|gb|EKU97286.1| dihydroorotate oxidase A [Leptolyngbya sp. PCC 7375]
Length = 387
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 129/207 (62%), Gaps = 14/207 (6%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D ++ + + +YFVVNVSSPNT LR LQAK QL+ +L T+ Q P+L
Sbjct: 180 DYLQSFQRLQEHGNYFVVNVSSPNTPGLRSLQAKSQLEPILATLQTANTQQK-----PLL 234
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE-------ETGGL 236
+KIAPDL+ + DI D L + ++ G+I +NTT+ + + + + E GG+
Sbjct: 235 IKIAPDLAWADIDDILD--LAQQHQLAGIIATNTTIAKDQLVTKHLNQTGNLVVDEAGGI 292
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG P+R ++T++I +Y+ T G+LPI+GVGG+F+ DA+EKI AGASL+Q+YT ++Y GP
Sbjct: 293 SGVPVRQRATDVIRYIYQKTNGQLPIVGVGGIFTADDAWEKITAGASLLQVYTGWIYEGP 352
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVG 323
+V I L L + G NS+ +A+G
Sbjct: 353 WMVKNILQGLLTKLDEHGLNSIQEAIG 379
>gi|163867814|ref|YP_001609018.1| dihydroorotate dehydrogenase 2 [Bartonella tribocorum CIP 105476]
gi|189038417|sp|A9IQ81.1|PYRD_BART1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|161017465|emb|CAK01023.1| Dihydroorotate dehydrogenase [Bartonella tribocorum CIP 105476]
Length = 360
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D GI F DVA YF VN+SSPNT LR LQA+D L LL + +
Sbjct: 136 VNIGANKDTVDKIDDYTVGIAHFYDVADYFTVNISSPNTPGLRDLQARDSLHLLLNAISK 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K PI +KIAPDLS E DIA+ + S DGLIVSNTT+ R ++
Sbjct: 196 ARKEQEKKHGFSIPIFLKIAPDLSEKELDDIAEEIKLSD--FDGLIVSNTTLSRQGLNNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + ++ IIGVGGV + A EK+KAGA L+Q+
Sbjct: 254 HFSNEEGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVKDAQTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP LV I E+ +++Q++G +++
Sbjct: 314 YSGMVYEGPNLVITILKEILQMMQQDGVDNI 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ +GI F DVA YF VN+SSPNT LR LQA+D L LL + + R + K PI
Sbjct: 151 YTVGIAHFYDVADYFTVNISSPNTPGLRDLQARDSLHLLLNAISKARKEQEKKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDLS E DIA+ +
Sbjct: 211 FLKIAPDLSEKELDDIAEEI 230
>gi|425467201|ref|ZP_18846485.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9809]
gi|389830082|emb|CCI28152.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9809]
Length = 382
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 ITIIDLAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
IS +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 ISFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++Q VG
Sbjct: 362 KLEVNGLTNINQGVG 376
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
I D+ Y + + + NT R L K + E ++
Sbjct: 244 ITIIDLAF-------------SYQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
+PL
Sbjct: 291 GQPL 294
>gi|297539533|ref|YP_003675302.1| dihydroorotate dehydrogenase [Methylotenera versatilis 301]
gi|297258880|gb|ADI30725.1| dihydroorotate dehydrogenase [Methylotenera versatilis 301]
Length = 338
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK-- 177
+ V D + G+ K A Y VN+SSPNT NLR LQ K+ L HLL T+ + +LA +
Sbjct: 151 NAVDDYLIGMQKVYAYASYITVNISSPNTKNLRALQEKEALSHLLATLKLEQTKLADQHG 210
Query: 178 PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLS 237
PI +KIAPDL L++ +IAD+++ K +DG+I +NTT+ R + + EETGGLS
Sbjct: 211 KYVPITLKIAPDLELEQVNEIADLLMQHK--IDGVIAANTTLSREKVQGMEHAEETGGLS 268
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G P+R+KST +I ++ + +G LPIIGVGG+ SG DA EK+ GA LVQ+Y+ +Y GP
Sbjct: 269 GAPVRSKSTLVIQQLSQRLQGALPIIGVGGILSGADAVEKVAVGADLVQVYSGLIYKGPK 328
Query: 298 LVTRIKSEL 306
LV I L
Sbjct: 329 LVHDICKTL 337
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 29 NMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 88
N+ +F + + +L+G+ K A Y VN+SSPNT NLR LQ K+ L HLL T+
Sbjct: 140 NIGKNFDTLMENAVDDYLIGMQKVYAYASYITVNISSPNTKNLRALQEKEALSHLLATLK 199
Query: 89 ETRNQLALK--PLPPILVKIAPDLSLDEKKDIADVVL 123
+ +LA + PI +KIAPDL L++ +IAD+++
Sbjct: 200 LEQTKLADQHGKYVPITLKIAPDLELEQVNEIADLLM 236
>gi|402823113|ref|ZP_10872553.1| dihydroorotate dehydrogenase 2 [Sphingomonas sp. LH128]
gi|402263371|gb|EJU13294.1| dihydroorotate dehydrogenase 2 [Sphingomonas sp. LH128]
Length = 352
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D +A Y VN+SSPNT LR LQ + L LL V+E
Sbjct: 139 INIGANKDSTDRVNDYAIMARLMAPLAGYLAVNISSPNTPGLRALQDESALTGLLDAVIE 198
Query: 170 TRNQ-LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+R++ PP+ +K+APDL + IA + +D + LIVSNTT+ R L ++
Sbjct: 199 SRDEACGAGHRPPVFLKVAPDLEPADVDAIARIAIDKQLGA--LIVSNTTISRPP-LASQ 255
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+K ETGGLSG PLR+ + + + + K T G +P++GVGG+ + DA+ +I+AGASLVQ+Y
Sbjct: 256 HKGETGGLSGAPLRDLAQQRLRDFRKATGGAMPLVGVGGIANAADAWARIRAGASLVQLY 315
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
++ VY GP + I L EL++++G+ S+++AVG
Sbjct: 316 SAMVYEGPGIAKAINKGLLELMRRDGFASIAEAVG 350
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G + R+ +RV R G G N S R+ + + L+ L A Y VN
Sbjct: 118 GGAQDAVYRLEARVRRPGVVGINIGANK-DSTDRVNDYAIMARLMAPL-----AGYLAVN 171
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQ-LALKPLPPILVKIAPDLSLDEKKDIADV 121
+SSPNT LR LQ + L LL V+E+R++ PP+ +K+APDL + IA +
Sbjct: 172 ISSPNTPGLRALQDESALTGLLDAVIESRDEACGAGHRPPVFLKVAPDLEPADVDAIARI 231
Query: 122 VLDSVKGIL 130
+D G L
Sbjct: 232 AIDKQLGAL 240
>gi|425444869|ref|ZP_18824910.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|389735283|emb|CCI01181.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9443]
Length = 382
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 127/196 (64%), Gaps = 16/196 (8%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL E
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDL---EW 240
Query: 196 KDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTE 247
+DI ++ L ++ G++ +NTT R EE GG+SG+PLR +STE
Sbjct: 241 EDIITIIELAFSYQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTE 300
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L
Sbjct: 301 VIRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLT 360
Query: 308 ELLQKEGYNSVSQAVG 323
E L+ G +++QAVG
Sbjct: 361 EKLEANGLTNINQAVG 376
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 8/67 (11%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL E
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDL---EW 240
Query: 116 KDIADVV 122
+DI ++
Sbjct: 241 EDIITII 247
>gi|319898411|ref|YP_004158504.1| Dihydroorotate dehydrogenase [Bartonella clarridgeiae 73]
gi|319402375|emb|CBI75914.1| Dihydroorotate dehydrogenase [Bartonella clarridgeiae 73]
Length = 362
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 4/212 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D + GI+ F D A YF +N+SSPNT LR LQ ++ L+ L++ + +
Sbjct: 136 VNIGANKDTVNRIDDYISGIVCFYDAADYFALNISSPNTPGLRNLQIRNSLRFLIQAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
TR++ K PI +KIAPDL+ E D+A + S DGLI+SNTT+ R D
Sbjct: 196 TRSEQKEKHGFSVPIFLKIAPDLTEKELDDVAQEI--SVSDFDGLIISNTTLSRQGLTDN 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
++ E GGLSG PL +ST ++++M K + IIGVGGV + A EKIKAGA L+QI
Sbjct: 254 KWIAEEGGLSGRPLFERSTIVLAKMRKKLGKNIAIIGVGGVKDAQTALEKIKAGADLIQI 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
Y+ +Y GP + I E+ L+Q++G ++++
Sbjct: 314 YSGMIYEGPNIAVTIMKEILRLMQQDGIDTIT 345
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI+ F D A YF +N+SSPNT LR LQ ++ L+ L++ + +TR++ K PI
Sbjct: 151 YISGIVCFYDAADYFALNISSPNTPGLRNLQIRNSLRFLIQAISQTRSEQKEKHGFSVPI 210
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ E D+A
Sbjct: 211 FLKIAPDLTEKELDDVA 227
>gi|426401055|ref|YP_007020027.1| dihydroorotate oxidase [Candidatus Endolissoclinum patella L2]
gi|425857723|gb|AFX98759.1| dihydroorotate oxidase [Candidatus Endolissoclinum patella L2]
Length = 357
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 132/219 (60%), Gaps = 2/219 (0%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K+ +++ D + KF +A Y +NVSSPNT LR LQ K L LL TV++
Sbjct: 137 INIGANKNTLNLIDDYDFCVRKFAQLADYITINVSSPNTPGLRDLQEKKSLSKLLDTVIK 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ + PPIL+KI+PDL + + I D + S + GLI+SNTTV R +L ++
Sbjct: 197 ARDIAGYENTPPILLKISPDLREGQLEAIVDTAVRSG--ITGLIISNTTVTRPAFLRSKL 254
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ETGGLSG PL ST ++++ + L +IG GGV S + A+ KI+AGASLVQ+Y+
Sbjct: 255 SKETGGLSGRPLFELSTRILAQAKLMAGNSLVLIGAGGVESTETAYTKIRAGASLVQLYS 314
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
+ VY+G L RI++EL + GY ++ VG K+
Sbjct: 315 ALVYNGLSLFMRIRNELSARITASGYPTIRSVVGIDAKT 353
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
+ KF +A Y +NVSSPNT LR LQ K L LL TV++ R+ + PPIL+KI+P
Sbjct: 156 VRKFAQLADYITINVSSPNTPGLRDLQEKKSLSKLLDTVIKARDIAGYENTPPILLKISP 215
Query: 109 DLSLDEKKDIADVVLDS 125
DL + + I D + S
Sbjct: 216 DLREGQLEAIVDTAVRS 232
>gi|395326933|gb|EJF59337.1| hypothetical protein DICSQDRAFT_89420 [Dichomitus squalens LYAD-421
SS1]
Length = 515
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 5/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D V G+ FG A VVNVSSPNT LR +Q++ L+ LL VV TR+++
Sbjct: 234 KSSPPDSIADFVAGVRTFGPYADALVVNVSSPNTPGLRGMQSRALLQELLSGVVATRDEV 293
Query: 175 AVKP----LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
P +LVKIAPDL+ E D+A VL + +DG+IVSNTT+ R L K
Sbjct: 294 TATSSHSHRPRLLVKIAPDLTEPEITDVAAAVL-ATGGIDGVIVSNTTIQRPPSLSDPNK 352
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL+ S + + L +P+IG GG+ SG DA E +AGA+ VQ+YT+
Sbjct: 353 VEVGGLSGPPLKPLSLTTLRTLRGLLPASVPLIGCGGISSGVDALEFARAGAAAVQLYTA 412
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y GP +IK EL ELL+KEG
Sbjct: 413 FGYQGPGTARQIKDELTELLRKEG 436
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP----LP 100
++ G+ FG A VVNVSSPNT LR +Q++ L+ LL VV TR+++ P
Sbjct: 244 FVAGVRTFGPYADALVVNVSSPNTPGLRGMQSRALLQELLSGVVATRDEVTATSSHSHRP 303
Query: 101 PILVKIAPDLSLDEKKDIADVVL 123
+LVKIAPDL+ E D+A VL
Sbjct: 304 RLLVKIAPDLTEPEITDVAAAVL 326
>gi|339717693|pdb|3SFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Dihydroorotate
Dehydrogenase Bound With Inhibitor Dsm267
Length = 400
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 138/231 (59%), Gaps = 18/231 (7%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+S+ + KD ++V D I K G A Y +NVSSPNT LR Q +LK+++ +V E
Sbjct: 171 VSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 230
Query: 170 TRNQL--------------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ L K P + VK+APDL+ ++KK+IADV+L++ +DG+I+S
Sbjct: 231 EIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETN--IDGMIIS 288
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NTT + ++ + GG+SG L++ ST+ I EMY T ++PII GG+FSG DA
Sbjct: 289 NTTTQINDI--KSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDAL 346
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
EKI+AGAS+ Q+Y+ V++G +IK EL LL + GY ++ +A+G H
Sbjct: 347 EKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKH 397
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------- 94
I K G A Y +NVSSPNT LR Q +LK+++ +V E + L
Sbjct: 190 INKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFN 249
Query: 95 ALKPLPPILVKIAPDLSLDEKKDIADVVLDS 125
K P + VK+APDL+ ++KK+IADV+L++
Sbjct: 250 TTKKKPLVFVKLAPDLNQEQKKEIADVLLET 280
>gi|306844951|ref|ZP_07477532.1| dihydroorotate oxidase [Brucella inopinata BO1]
gi|306274583|gb|EFM56372.1| dihydroorotate oxidase [Brucella inopinata BO1]
Length = 364
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TRNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R +
Sbjct: 198 ARDEEGKMCTLKRPVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLKNP 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LVQ+
Sbjct: 256 ENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
YT +Y GP L I L ++ EG +S+++
Sbjct: 316 YTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R++ LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGKMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|254839643|pdb|3I65|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase Bound
With Triazolopyrimidine-Based Inhibitor Dsm1
gi|254839644|pdb|3I68|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase Bound
With Triazolopyrimidine-Based Inhibitor Dsm2
gi|254839645|pdb|3I6R|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase Bound
With Triazolopyrimidine-Based Inhibitor Dsm74
gi|303325171|pdb|3O8A|A Chain A, Crystal Structure Of Plasmodium Falciparum Dihydroorotate
Dehydrogenase Bound With Novel Inhibitor Genz667348
Length = 415
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 138/231 (59%), Gaps = 18/231 (7%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+S+ + KD ++V D I K G A Y +NVSSPNT LR Q +LK+++ +V E
Sbjct: 186 VSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 245
Query: 170 TRNQL--------------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ L K P + VK+APDL+ ++KK+IADV+L++ +DG+I+S
Sbjct: 246 EIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETN--IDGMIIS 303
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NTT + ++ + GG+SG L++ ST+ I EMY T ++PII GG+FSG DA
Sbjct: 304 NTTTQINDI--KSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDAL 361
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
EKI+AGAS+ Q+Y+ V++G +IK EL LL + GY ++ +A+G H
Sbjct: 362 EKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKH 412
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------- 94
I K G A Y +NVSSPNT LR Q +LK+++ +V E + L
Sbjct: 205 INKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFN 264
Query: 95 ALKPLPPILVKIAPDLSLDEKKDIADVVLDS 125
K P + VK+APDL+ ++KK+IADV+L++
Sbjct: 265 TTKKKPLVFVKLAPDLNQEQKKEIADVLLET 295
>gi|390596958|gb|EIN06358.1| hypothetical protein PUNSTDRAFT_53841 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 460
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 4/202 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ + + D V+G+ FG A VVNVSSPNT LR LQ + QLK LL VV RN L
Sbjct: 218 KESALESIDDFVRGVQVFGPHADVLVVNVSSPNTPGLRDLQRRSQLKDLLSGVVRARNDL 277
Query: 175 --AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE 232
+ P +++K++PDL ++ ++IAD+V S VDG+IVSNTT+ R L K E
Sbjct: 278 HATFQRKPKLMLKLSPDLEAEDVREIADIVRSSG--VDGVIVSNTTISRPRGLTHPNKTE 335
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL++ S ++ + +PIIG GG+ SG DA E +AGAS+VQIYT F
Sbjct: 336 AGGLSGPPLKHLSLAVLRTLRSNLPESIPIIGCGGITSGADALEFARAGASMVQIYTHFG 395
Query: 293 YHGPPLVTRIKSELEELLQKEG 314
Y G RIK+EL E L++EG
Sbjct: 396 YDGVGACRRIKNELSEDLRREG 417
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPI 102
++ G+ FG A VVNVSSPNT LR LQ + QLK LL VV RN L + P +
Sbjct: 228 FVRGVQVFGPHADVLVVNVSSPNTPGLRDLQRRSQLKDLLSGVVRARNDLHATFQRKPKL 287
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
++K++PDL ++ ++IAD+V S V G++
Sbjct: 288 MLKLSPDLEAEDVREIADIVRSSGVDGVI 316
>gi|392589966|gb|EIW79296.1| hypothetical protein CONPUDRAFT_138438 [Coniophora puteana
RWD-64-598 SS2]
Length = 499
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 133/233 (57%), Gaps = 11/233 (4%)
Query: 86 TVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSS 145
T V+ + AL+P + V + + K AD V D V G+ FG VA VVNVSS
Sbjct: 200 TQVDESSTAALRPGAILAVNLGKN-----KTSPADSVDDFVSGVWTFGPVADVLVVNVSS 254
Query: 146 PNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL----PPILVKIAPDLSLDEKKDIADV 201
PNT LR LQ ++ L LLK V E R+ L P+ P +++K+APDL + +IA+V
Sbjct: 255 PNTPGLRGLQNRELLDELLKQVTEARDALPPSPITSRRPRLVLKLAPDLEEFQTIEIAEV 314
Query: 202 VLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLP 261
+ S VDG+IVSNTTV R L K E GGLSG PL++ + + + +P
Sbjct: 315 IRHSG--VDGVIVSNTTVARPSNLLDANKVEVGGLSGVPLKSFALRTLKTLRSNLPANIP 372
Query: 262 IIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
IIG GG+ SG DA E +AGASLVQ+YTSF Y G + RIK EL LL EG
Sbjct: 373 IIGCGGISSGADALEYARAGASLVQVYTSFGYDGAGMCRRIKDELAGLLATEG 425
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----P 100
++ G+ FG VA VVNVSSPNT LR LQ ++ L LLK V E R+ L P+ P
Sbjct: 234 FVSGVWTFGPVADVLVVNVSSPNTPGLRGLQNRELLDELLKQVTEARDALPPSPITSRRP 293
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+++K+APDL + +IA+V+ S V G++
Sbjct: 294 RLVLKLAPDLEEFQTIEIAEVIRHSGVDGVI 324
>gi|392968636|ref|ZP_10334052.1| dihydroorotate dehydrogenase [Fibrisoma limi BUZ 3]
gi|387842998|emb|CCH56106.1| dihydroorotate dehydrogenase [Fibrisoma limi BUZ 3]
Length = 361
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 118/176 (67%), Gaps = 7/176 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
DV YFVVNVSSPNT LR LQ K+ L LL + ++ NQ P PIL+KIAPDL+
Sbjct: 178 DVVDYFVVNVSSPNTPGLRDLQEKEPLTRLL-SALQQENQQHAAP-KPILLKIAPDLTDG 235
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEE--TGGLSGEPLRNKSTELIS 250
+ DI +V ++ ++ G+I +NTT+ R + DA E+ GG+SG PLR +STE+I
Sbjct: 236 QLDDIIAIV--AETRIAGVIATNTTISRADLTTDAAVVEQMGAGGVSGYPLRKRSTEVIR 293
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
++ + G PIIGVGG+FS +DA EK++AGASLVQ+YTSF+Y GP L RI EL
Sbjct: 294 YLHDRSGGAFPIIGVGGIFSAEDALEKLQAGASLVQVYTSFIYEGPALAKRINQEL 349
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + DV YFVVNVSSPNT LR LQ K+ L LL + ++ NQ P PIL+
Sbjct: 169 YLICFRELFDVVDYFVVNVSSPNTPGLRDLQEKEPLTRLL-SALQQENQQHAAP-KPILL 226
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ + DI +V ++ + G++
Sbjct: 227 KIAPDLTDGQLDDIIAIVAETRIAGVI 253
>gi|374606287|ref|ZP_09679170.1| dihydroorotate dehydrogenase 2 [Paenibacillus dendritiformis C454]
gi|374388101|gb|EHQ59540.1| dihydroorotate dehydrogenase 2 [Paenibacillus dendritiformis C454]
Length = 370
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 131/197 (66%), Gaps = 9/197 (4%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL--PPILVKIAPDLSL 192
VA FV+N+SSPNT +LR LQ D+LK LL+ V +L + +LVKIAPD+S
Sbjct: 179 VADLFVINISSPNTPDLRNLQHGDELKSLLQAAVSDMKRLNAEHGRNKAVLVKIAPDVSD 238
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE--ETGGLSGEPLRNKSTELIS 250
E + + + ++ S V G+I +NTT+ R + A + E GGLSG PL +ST+++S
Sbjct: 239 AELEQMTNTIMASG--VSGIIATNTTLSR---MGAEHSNRLEAGGLSGRPLEERSTQVVS 293
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
++Y+LT G +PIIG GGVFS +DA+ KI+AGASLV+IYT F+Y GP + + + L LL
Sbjct: 294 QLYRLTNGSIPIIGSGGVFSAEDAYRKIRAGASLVEIYTGFIYRGPGVNRDLAAGLARLL 353
Query: 311 QKEGYNSVSQAVGAAHK 327
++G+ +S+AVGA H+
Sbjct: 354 ARDGFRHISEAVGADHR 370
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPILVKIAPDLSL 112
VA FV+N+SSPNT +LR LQ D+LK LL+ V +L + +LVKIAPD+S
Sbjct: 179 VADLFVINISSPNTPDLRNLQHGDELKSLLQAAVSDMKRLNAEHGRNKAVLVKIAPDVSD 238
Query: 113 DEKKDIADVVLDS-VKGIL 130
E + + + ++ S V GI+
Sbjct: 239 AELEQMTNTIMASGVSGII 257
>gi|410031024|ref|ZP_11280854.1| dihydroorotate dehydrogenase 2 [Marinilabilia sp. AK2]
Length = 349
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 7/197 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D VLD + + YFVVNVSSPNT NLR+LQ K+ LK LL T V+ N KP
Sbjct: 155 DAVLDYLYCLEVLHPYVDYFVVNVSSPNTPNLRELQEKEPLKKLL-TAVKNANTNKRKP- 212
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL---DARYKEETGGL 236
PIL+KIAPDL++ + DI ++V+++K +DG+I +NTT+DR + + K GG+
Sbjct: 213 KPILLKIAPDLTVGQLDDIIEIVMETK--IDGVIATNTTIDREQLTTPAELVEKIGAGGV 270
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG+ L +ST++I + + PIIGVGG+F+ +DA EKIKAGASLVQIYT +Y GP
Sbjct: 271 SGKVLSKRSTDVIRYLSTQSNQAFPIIGVGGIFTAEDAIEKIKAGASLVQIYTGMIYEGP 330
Query: 297 PLVTRIKSELEELLQKE 313
+V RIK L E L+ +
Sbjct: 331 SIVKRIKKGLAEYLENQ 347
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR+LQ K+ LK LL T V+ N KP PIL+KIAPDL++ + D
Sbjct: 173 YFVVNVSSPNTPNLRELQEKEPLKKLL-TAVKNANTNKRKP-KPILLKIAPDLTVGQLDD 230
Query: 118 IADVVLDS 125
I ++V+++
Sbjct: 231 IIEIVMET 238
>gi|326386608|ref|ZP_08208230.1| dihydroorotate dehydrogenase 2 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208923|gb|EGD59718.1| dihydroorotate dehydrogenase 2 [Novosphingobium nitrogenifigens DSM
19370]
Length = 343
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 137/232 (59%), Gaps = 11/232 (4%)
Query: 92 NQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANL 151
+L +P P +V + ++ KD D + D + +A+Y VN+SSPNT L
Sbjct: 121 QRLLQRPASPGIVGV----NIGANKDSPDRIADYAQMTRMMAPLANYLTVNISSPNTPGL 176
Query: 152 RKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDG 211
R LQ + L LL V+ R PI +K+APDL + I + LD + +D
Sbjct: 177 RALQDEGALAALLDAVMAARGVSQT----PIFLKLAPDLETSDIDAICRIALDKR--LDA 230
Query: 212 LIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
LIVSNTT+ R L +R+ E+GGLSGEPLR+ + + + + K + G +P+IGVGG+ +
Sbjct: 231 LIVSNTTISRPP-LRSRHAGESGGLSGEPLRDLALQRLRDFRKASGGAIPLIGVGGIATV 289
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+DA+++I+AGASL+Q+Y++ VY GP LV RI L E + EG S+++AVG
Sbjct: 290 EDAWQRIRAGASLIQLYSALVYEGPGLVRRIVHGLAERARAEGMGSIAEAVG 341
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+A+Y VN+SSPNT LR LQ + L LL V+ R PI +K+APDL +
Sbjct: 160 LANYLTVNISSPNTPGLRALQDEGALAALLDAVMAARGVSQT----PIFLKLAPDLETSD 215
Query: 115 KKDIADVVLD 124
I + LD
Sbjct: 216 IDAICRIALD 225
>gi|335035628|ref|ZP_08528963.1| dihydroorotate dehydrogenase [Agrobacterium sp. ATCC 31749]
gi|333792959|gb|EGL64321.1| dihydroorotate dehydrogenase [Agrobacterium sp. ATCC 31749]
Length = 363
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDSEDRIADYVQGIEAFYAVASYFTVNISSPNTPGLRDLQARESLAALLTAVLE 197
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
+R A + PI +KIAPDL+ + D+A+ L +DGLIVSNTT+ R
Sbjct: 198 SRKTEAERLGKRIPIFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSREGLRPG 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
++ E GGLSG+PL ST +++++ + LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 PHRGEAGGLSGKPLFELSTTVLAKIRRRVGANLPIIGVGGVSSAETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L + I + +L+ +EG ++
Sbjct: 316 YSCMVYEGPGLPSAIVKGMSKLVAREGVETI 346
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E+R A L PI
Sbjct: 153 YVQGIEAFYAVASYFTVNISSPNTPGLRDLQARESLAALLTAVLESRKTEAERLGKRIPI 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + D+A+ L
Sbjct: 213 FLKIAPDLTEEGLDDVAEEAL 233
>gi|73666811|ref|YP_302827.1| dihydroorotate dehydrogenase 2 [Ehrlichia canis str. Jake]
gi|72393952|gb|AAZ68229.1| dihydroorotate oxidase A [Ehrlichia canis str. Jake]
Length = 350
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 128/192 (66%), Gaps = 3/192 (1%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
+++Y +N+SSPNT L + Q KD L LL + + R PI++KI+PD++ ++
Sbjct: 162 LSNYITLNISSPNTPGLHEFQKKDLLLELLTAISQVRKSADYAESIPIMLKISPDINDNK 221
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYK 254
K+DI D+ L + K+ GLI+SNT++ L+ GGLSG+PL + ST+++SE+Y+
Sbjct: 222 KQDIVDLAL--QYKISGLIISNTSLQHKTLLNTDINIR-GGLSGKPLFDLSTQVLSEIYQ 278
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
+++GKL +IG GGV SG A+EKIKAGASL+Q+YT+ VY+G + +I EL ELL +G
Sbjct: 279 VSQGKLLLIGCGGVSSGYHAYEKIKAGASLIQLYTAIVYNGFNIANKISLELAELLAADG 338
Query: 315 YNSVSQAVGAAH 326
+ VS A+G H
Sbjct: 339 FTKVSDAIGCNH 350
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 21/125 (16%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+++Y +N+SSPNT L + Q KD L LL + + R PI++KI+PD++ ++
Sbjct: 162 LSNYITLNISSPNTPGLHEFQKKDLLLELLTAISQVRKSADYAESIPIMLKISPDINDNK 221
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+DI D+ L Y + + NT+ Q K LL T + R L
Sbjct: 222 KQDIVDLAL-------------QYKISGLIISNTS--------LQHKTLLNTDINIRGGL 260
Query: 175 AVKPL 179
+ KPL
Sbjct: 261 SGKPL 265
>gi|406705645|ref|YP_006755998.1| dihydroorotate oxidase A [alpha proteobacterium HIMB5]
gi|406651421|gb|AFS46821.1| dihydroorotate oxidase A [alpha proteobacterium HIMB5]
Length = 348
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 136/214 (63%), Gaps = 4/214 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D + F + A Y +N+SSPNT NLR + +LK LL+ +
Sbjct: 136 INIGPNKDTKDRLNDYLINFETFHEYADYITINISSPNTENLRNFHDQTKLKELLEKINL 195
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ +L K PI+VKI+PD+ + +I++++L++K +D I+SNT+ E L+
Sbjct: 196 RKKELNSKT--PIVVKISPDIIDKQINEISEILLENK--IDVAIISNTSDSTRENLNDIQ 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K + GGLSG+P+ KS +I + YKL KG++ IIGVGGV SGK AFEK +GA +Q+YT
Sbjct: 252 KHQKGGLSGKPIEVKSNIVIKKFYKLLKGEIKIIGVGGVDSGKSAFEKFLSGADYIQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VY GP +V++IK EL+E+L KEG + S+ VG
Sbjct: 312 GMVYQGPNIVSKIKKELKEILIKEGVKNYSEIVG 345
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
L +L+ F + A Y +N+SSPNT NLR + +LK LL+ + + +L K P
Sbjct: 148 LNDYLINFETFHEYADYITINISSPNTENLRNFHDQTKLKELLEKINLRKKELNSK--TP 205
Query: 102 ILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
I+VKI+PD+ + +I++++L++ DVA + N S NL +Q K Q
Sbjct: 206 IVVKISPDIIDKQINEISEILLENKI------DVA--IISNTSDSTRENLNDIQ-KHQKG 256
Query: 162 HLLKTVVETRNQLAVKPLPPIL 183
L +E ++ + +K +L
Sbjct: 257 GLSGKPIEVKSNIVIKKFYKLL 278
>gi|70949475|ref|XP_744144.1| dihydroorotate dehydrogenase, mitochondrial precursor, [Plasmodium
chabaudi chabaudi]
gi|56523974|emb|CAH79395.1| dihydroorotate dehydrogenase, mitochondrial precursor, putative
[Plasmodium chabaudi chabaudi]
Length = 415
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 153/279 (54%), Gaps = 43/279 (15%)
Query: 65 SPNTANLRKLQAKDQL--KHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+ N N RK Q +D+L KH++ +SL + KD ++V
Sbjct: 162 TENLINFRKKQQEDKLLSKHIV------------------------GVSLGKNKDTENMV 197
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------- 174
D I K A Y +NVSSPNT LR Q ++LK+++ V + N++
Sbjct: 198 DDLKYSIYKIARYADYIAINVSSPNTPGLRDNQESNKLKNIILFVKDEINRIEQRAHTSG 257
Query: 175 -----AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
K P + VK+APDL EKK IA V+LD+ VDG+I+SNTT+++ +
Sbjct: 258 NFWVNTTKKKPLVFVKLAPDLENSEKKKIAQVLLDTG--VDGMIISNTTINKMNI--KSF 313
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ + GG+SGE L++ ST+LIS+MY T ++PII GG+F+G DA EKI+AGAS+ Q+Y+
Sbjct: 314 EGKKGGVSGERLKDLSTDLISDMYIYTNKQIPIIASGGIFTGADALEKIEAGASVCQLYS 373
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
V++G +IK E L ++GY ++ +A+G H +
Sbjct: 374 CLVFNGVKSAIQIKREFNNALYQKGYYNLREAIGKKHSN 412
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------A 95
I K A Y +NVSSPNT LR Q ++LK+++ V + N++
Sbjct: 204 IYKIARYADYIAINVSSPNTPGLRDNQESNKLKNIILFVKDEINRIEQRAHTSGNFWVNT 263
Query: 96 LKPLPPILVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKL 154
K P + VK+APDL EKK IA V+LD+ V G+ +++ ++ N N++
Sbjct: 264 TKKKPLVFVKLAPDLENSEKKKIAQVLLDTGVDGM----------IISNTTINKMNIKSF 313
Query: 155 QAK 157
+ K
Sbjct: 314 EGK 316
>gi|186681397|ref|YP_001864593.1| dihydroorotate dehydrogenase 2 [Nostoc punctiforme PCC 73102]
gi|226710771|sp|B2IU79.1|PYRD_NOSP7 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|186463849|gb|ACC79650.1| dihydroorotate dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 376
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 136/221 (61%), Gaps = 19/221 (8%)
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
++ A LDS + +LK D+ YFVVNVSSPNT LR LQ L +L + +
Sbjct: 165 EEAAQDYLDSFR-LLK--DLGDYFVVNVSSPNTPGLRSLQDASMLSAILNLLQQENTTHK 221
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDA 227
PI VKIAPDL + IA+++ L + G+I +NTT+ R
Sbjct: 222 -----PIFVKIAPDL---DWVAIAEIISLAKTYNLAGIIATNTTIRRDGLKTQVINQTGK 273
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+EE GG+SGEPLR++STE+I +++ T+G++PIIGVGG+FS +DA+EKI AGASL+Q+
Sbjct: 274 SPQEEAGGISGEPLRDRSTEVIRFIWQQTQGEIPIIGVGGIFSPEDAWEKITAGASLIQV 333
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
YT ++Y GP +V RI L L++ G+NS+ +AVG KS
Sbjct: 334 YTGWIYEGPLMVRRILEGLLSKLEQNGFNSIREAVGLEIKS 374
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
D+ YFVVNVSSPNT LR LQ L +L + + PI VKIAPDL
Sbjct: 180 DLGDYFVVNVSSPNTPGLRSLQDASMLSAILNLLQQENTTHK-----PIFVKIAPDL 231
>gi|295132731|ref|YP_003583407.1| dihydroorotate dehydrogenase 2 [Zunongwangia profunda SM-A87]
gi|294980746|gb|ADF51211.1| dihydroorotate dehydrogenase 2 [Zunongwangia profunda SM-A87]
Length = 342
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 120/174 (68%), Gaps = 7/174 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-LPPILVKIAPDLSL 192
D YFVVNVSSPNT NLR LQ K+ L HLLKT++E N KP PIL+KIAPDL+
Sbjct: 168 DYVDYFVVNVSSPNTPNLRALQDKEPLTHLLKTLMELNN---AKPKQKPILLKIAPDLTD 224
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
+ DI ++V + K+DG+I +NTT+ R E L + K+ETGGLSG+PL ++T++I +
Sbjct: 225 TQLLDIINIV--KETKIDGVIATNTTISR-EGLQSDNKKETGGLSGKPLTKRATQVIKFL 281
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + PIIGVGG+ + DA EK++AGASLVQ+YT F+Y GP L+ I ++
Sbjct: 282 SEKSNRSFPIIGVGGIHTADDAIEKLEAGASLVQLYTGFIYEGPALIKAINKKI 335
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K+ L HLLKT++E N A PIL+KIAPDL+
Sbjct: 168 DYVDYFVVNVSSPNTPNLRALQDKEPLTHLLKTLMELNN--AKPKQKPILLKIAPDLTDT 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V ++ + G++
Sbjct: 226 QLLDIINIVKETKIDGVI 243
>gi|62289305|ref|YP_221098.1| dihydroorotate dehydrogenase 2 [Brucella abortus bv. 1 str. 9-941]
gi|82699235|ref|YP_413809.1| dihydroorotate dehydrogenase 2 [Brucella melitensis biovar Abortus
2308]
gi|189023558|ref|YP_001934326.1| dihydroorotate dehydrogenase 2 [Brucella abortus S19]
gi|237814796|ref|ZP_04593794.1| dihydroorotate oxidase [Brucella abortus str. 2308 A]
gi|260545940|ref|ZP_05821681.1| dihydroorotate dehydrogenase [Brucella abortus NCTC 8038]
gi|260754095|ref|ZP_05866443.1| DHOdehase [Brucella abortus bv. 6 str. 870]
gi|260757316|ref|ZP_05869664.1| dihydroorotate dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|260761140|ref|ZP_05873483.1| dihydroorotate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883122|ref|ZP_05894736.1| dihydroorotate dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|261213342|ref|ZP_05927623.1| dihydroorotate dehydrogenase [Brucella abortus bv. 3 str. Tulya]
gi|297247722|ref|ZP_06931440.1| dihydroorotate oxidase [Brucella abortus bv. 5 str. B3196]
gi|376273938|ref|YP_005152516.1| dihydroorotate oxidase [Brucella abortus A13334]
gi|423167520|ref|ZP_17154223.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI435a]
gi|423170104|ref|ZP_17156779.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI474]
gi|423173816|ref|ZP_17160487.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI486]
gi|423176899|ref|ZP_17163545.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI488]
gi|423179537|ref|ZP_17166178.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI010]
gi|423182667|ref|ZP_17169304.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI016]
gi|423186390|ref|ZP_17173004.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI021]
gi|423191172|ref|ZP_17177780.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI259]
gi|81309463|sp|Q57F47.1|PYRD_BRUAB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|109892886|sp|Q2YPG3.1|PYRD_BRUA2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|226710749|sp|B2S953.1|PYRD_BRUA1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|62195437|gb|AAX73737.1| PyrD, dihydroorotate dehydrogenase [Brucella abortus bv. 1 str.
9-941]
gi|82615336|emb|CAJ10297.1| Dihydroorotate dehydrogenase:FMN/related compound-binding
core:Dihydroorotate dehydrogenase 2 [Brucella melitensis
biovar Abortus 2308]
gi|189019130|gb|ACD71852.1| Dihydroorotate dehydrogenase [Brucella abortus S19]
gi|237789633|gb|EEP63843.1| dihydroorotate oxidase [Brucella abortus str. 2308 A]
gi|260097347|gb|EEW81222.1| dihydroorotate dehydrogenase [Brucella abortus NCTC 8038]
gi|260667634|gb|EEX54574.1| dihydroorotate dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|260671572|gb|EEX58393.1| dihydroorotate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674203|gb|EEX61024.1| DHOdehase [Brucella abortus bv. 6 str. 870]
gi|260872650|gb|EEX79719.1| dihydroorotate dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|260914949|gb|EEX81810.1| dihydroorotate dehydrogenase [Brucella abortus bv. 3 str. Tulya]
gi|297174891|gb|EFH34238.1| dihydroorotate oxidase [Brucella abortus bv. 5 str. B3196]
gi|363401544|gb|AEW18514.1| dihydroorotate oxidase [Brucella abortus A13334]
gi|374540954|gb|EHR12453.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI435a]
gi|374541562|gb|EHR13057.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI486]
gi|374542340|gb|EHR13829.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI474]
gi|374551056|gb|EHR22491.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI010]
gi|374551513|gb|EHR22947.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI016]
gi|374552649|gb|EHR24072.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI488]
gi|374553862|gb|EHR25276.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI259]
gi|374558069|gb|EHR29463.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI021]
Length = 364
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 8/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYLLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TR----NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
R N +K P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R
Sbjct: 198 ARDEEGNMCTLKR--PVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLK 253
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LV
Sbjct: 254 NPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Q+YT +Y GP L I L ++ EG +S+++
Sbjct: 314 QLYTGLIYRGPGLPGEILRGLSTAIKHEGVSSIAE 348
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR----NQLALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R N LK
Sbjct: 153 YVAGIRRFYLLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|443897859|dbj|GAC75198.1| dihydroorotate dehydrogenase [Pseudozyma antarctica T-34]
Length = 756
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 169/307 (55%), Gaps = 22/307 (7%)
Query: 28 HNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 87
HN++ S R R ++ WLL + V + S +A+ R+L A K V
Sbjct: 217 HNVILSRLRDR---IRRWLLHSSSIASLQDALVASPDS-ASADARQLVAT-HPKSTSAFV 271
Query: 88 VETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPN 147
T +L+P + + + + + E+ V D VKG+ + G A +VNVSSPN
Sbjct: 272 DATDLPRSLRPAKMLGINLGKNKTSKEES-----VDDYVKGVERLGPYADMIIVNVSSPN 326
Query: 148 TANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--------PILVKIAPDLSLDEKKDIA 199
T LR+LQ + L+ LL VV+ R+ + L P+LVKIAPDLS +E D+A
Sbjct: 327 TPGLRRLQRRGVLEDLLTQVVKARDGMVESHLRFSDKKVQVPLLVKIAPDLSEEELHDVA 386
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETGGLSGEPLRNKSTELISEMYKLTKG 258
D L K +DGL++SNTT+ R L + + ETGGLSG P++ + ++ ++K +G
Sbjct: 387 DAAL--KSGIDGLVISNTTISRPASLRSSEHVRETGGLSGPPVKPLALRALTTVHKRLEG 444
Query: 259 KLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
KLPIIG GG+ + +DA + KAGAS V++YTSF Y G L R+K EL LL+ EG +
Sbjct: 445 KLPIIGCGGIATAQDALDFAKAGASAVELYTSFGYQGVGLPRRLKDELVSLLKAEG-TTW 503
Query: 319 SQAVGAA 325
+AVG+
Sbjct: 504 KEAVGSG 510
>gi|337270972|ref|YP_004615027.1| dihydroorotate dehydrogenase [Mesorhizobium opportunistum WSM2075]
gi|336031282|gb|AEH90933.1| dihydroorotate dehydrogenase [Mesorhizobium opportunistum WSM2075]
Length = 359
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D +G+ +F A Y VN+SSPNT LR +QA++QL LL V+
Sbjct: 138 VNIGANKDTADRIGDYERGVARFAPYASYLTVNISSPNTPGLRNMQAREQLGELLSRVMA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + +P P+ +KIAPDL E +DIA V ++ ++DG+IVSNTT+ R
Sbjct: 198 ARAAASAQP--PVFLKIAPDLVEAELEDIAAEV--TEKRIDGVIVSNTTISRPALRSGDV 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG+PL +ST ++++M +L + IIGVGGV + A EKI+AGA LVQ+YT
Sbjct: 254 ARETGGLSGKPLFERSTIVLAKMRRLLGPERTIIGVGGVDTTDAALEKIRAGADLVQLYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
S +Y GP L RI + + ++K S+ +
Sbjct: 314 SMIYAGPALPARIIAGMASFMEKGRLKSIRE 344
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ +F A Y VN+SSPNT LR +QA++QL LL V+ R + + PP+ +KIA
Sbjct: 156 GVARFAPYASYLTVNISSPNTPGLRNMQAREQLGELLSRVMAARAAASAQ--PPVFLKIA 213
Query: 108 PDLSLDEKKDI-ADVVLDSVKGI-----------LKFGDVAH 137
PDL E +DI A+V + G+ L+ GDVA
Sbjct: 214 PDLVEAELEDIAAEVTEKRIDGVIVSNTTISRPALRSGDVAR 255
>gi|126725197|ref|ZP_01741040.1| dihydroorotate dehydrogenase [Rhodobacterales bacterium HTCC2150]
gi|126706361|gb|EBA05451.1| dihydroorotate dehydrogenase [Rhodobacteraceae bacterium HTCC2150]
Length = 352
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 140/231 (60%), Gaps = 10/231 (4%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA +P I+ L+L KD D D + + G + VNVSSPNT LR
Sbjct: 125 RLAQRPQDAII-----GLNLGANKDSQDRADDFSRVLATCGAHLDFATVNVSSPNTEKLR 179
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ + L LLK V+ TR+ A PI +KIAPDLS E DIA V LD ++DG+
Sbjct: 180 DLQGAEALSALLKGVLATRD--AQSKRIPIFLKIAPDLSDAEISDIAGVALD--LELDGI 235
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT+ R + L +++++ GGLSG PL KST +++ + T GK+P+IGVGGV + +
Sbjct: 236 IATNTTLSR-DGLKNKHRDQMGGLSGAPLFEKSTRVLARLSHETNGKVPLIGVGGVATAE 294
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
A+ KIKAGAS VQ+YT+ VY G + +I L+ ++ +G +++S+AVG
Sbjct: 295 QAYAKIKAGASAVQLYTAMVYQGLSIGAKIARGLDTMVNADGLSNISEAVG 345
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LLK V+ TR+ A PI +KIAPDLS E D
Sbjct: 165 FATVNVSSPNTEKLRDLQGAEALSALLKGVLATRD--AQSKRIPIFLKIAPDLSDAEISD 222
Query: 118 IADVVLD 124
IA V LD
Sbjct: 223 IAGVALD 229
>gi|424898172|ref|ZP_18321746.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393182399|gb|EJC82438.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 362
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+L+KIAPDL+ + DIA L + +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAETSGRRVPVLLKIAPDLTEEGMDDIAAEALSHE--LDGLIVSNTTLSREGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L +LL +E S+ +
Sbjct: 316 YSCMVYEGPGLAGDIVRGLSKLLDREKVRSIRE 348
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R+++A P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEMAETSGRRVPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
L+KIAPDL+ + DIA
Sbjct: 213 LLKIAPDLTEEGMDDIA 229
>gi|319785542|ref|YP_004145018.1| dihydroorotate dehydrogenase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171430|gb|ADV14968.1| dihydroorotate dehydrogenase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 358
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD +D + D +G+ +F A Y VN+SSPNT LR +QA++QL LL V+
Sbjct: 138 VNIGANKDSSDRIGDYERGVARFAQYASYLTVNISSPNTPGLRNMQAREQLGELLSRVMA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + +P P+ +KIAPDL E +DIA V + + VDG+IVSNTT+ R
Sbjct: 198 ARAAASAQP--PVFLKIAPDLVEAELEDIAAEVTEKR--VDGVIVSNTTISRPPLRSGDT 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E+GGLSG+PL +ST ++++M L +L I+GVGGV S A +KI+AGA LVQ+YT
Sbjct: 254 ARESGGLSGKPLFERSTIVLAKMRNLLGPELAIVGVGGVDSADTALDKIRAGADLVQLYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
+Y GP L RI S + ++KE S+ +
Sbjct: 314 GMIYAGPSLPGRILSGMARFVEKERLKSICE 344
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ +F A Y VN+SSPNT LR +QA++QL LL V+ R + + PP+ +KIA
Sbjct: 156 GVARFAQYASYLTVNISSPNTPGLRNMQAREQLGELLSRVMAARAAASAQ--PPVFLKIA 213
Query: 108 PDLSLDEKKDI-ADVVLDSVKGIL 130
PDL E +DI A+V V G++
Sbjct: 214 PDLVEAELEDIAAEVTEKRVDGVI 237
>gi|443668746|ref|ZP_21134238.1| dihydroorotate oxidase [Microcystis aeruginosa DIANCHI905]
gi|159029334|emb|CAO90200.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330708|gb|ELS45403.1| dihydroorotate oxidase [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I ++ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 RTIIELAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++Q VG
Sbjct: 362 KLEANGLTNINQGVG 376
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+ I ++ Y + + + NT R L K + E ++
Sbjct: 244 RTIIELAFS-------------YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
+PL
Sbjct: 291 GQPL 294
>gi|344300672|gb|EGW30993.1| hypothetical protein SPAPADRAFT_72880 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 139/221 (62%), Gaps = 11/221 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D KG+ + G A V+NVSSPNT LR LQ++++L +LL TVV+ R+ L
Sbjct: 197 KNKFGDEISDYTKGVERLGPYADVLVINVSSPNTPGLRDLQSEEKLTNLLTTVVKQRDTL 256
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYL---DA 227
L PP+LVK+APDL+ E + IA+ + +VDG+I+SNTT+ R E L D+
Sbjct: 257 GTNLLGKKPPVLVKVAPDLTEPEIESIANSA--KEARVDGIIISNTTIQRPVEKLLTTDS 314
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ +TGGLSG+PL+ + + + + K TK L ++G GG+ SGKDA E KAGA+ ++
Sbjct: 315 QLINQTGGLSGKPLKPIALQALRTLRKYTKDSNLVLVGCGGISSGKDALEFGKAGATFIE 374
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT+F Y GP LV +I+ EL L+KEG + Q +G +K
Sbjct: 375 LYTAFAYKGPGLVAKIRDELAAELRKEG-KTWEQIIGEENK 414
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL---PPILV 104
G+ + G A V+NVSSPNT LR LQ++++L +LL TVV+ R+ L L PP+LV
Sbjct: 210 GVERLGPYADVLVINVSSPNTPGLRDLQSEEKLTNLLTTVVKQRDTLGTNLLGKKPPVLV 269
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
K+APDL+ E + IA+ ++ V GI+
Sbjct: 270 KVAPDLTEPEIESIANSAKEARVDGII 296
>gi|254465439|ref|ZP_05078850.1| dihydroorotate oxidase [Rhodobacterales bacterium Y4I]
gi|206686347|gb|EDZ46829.1| dihydroorotate oxidase [Rhodobacterales bacterium Y4I]
Length = 352
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 134/218 (61%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D K + G + VNVSSPNT LR LQ K L LL V+E
Sbjct: 137 LNLGANKDSADRAADFAKVLAHCGAHLDFATVNVSSPNTEKLRDLQGKAALSALLAGVIE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR+ L+ + P+ +KIAPDL +DIA V +++ +D +I +NTT+ R + L + +
Sbjct: 197 TRDGLSRRV--PVFLKIAPDLDRAGIEDIAAVAVETG--IDAVIATNTTLSR-DGLHSAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PL KST +++++ L G++P++GVGG+ + + A+ KI AGAS VQ YT
Sbjct: 252 KGEAGGLSGAPLFEKSTRVLAQLSDLLDGQVPLVGVGGISTAEQAYVKICAGASAVQFYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ VY G L I L++LL ++G+ +V+QAVG K
Sbjct: 312 AMVYGGLSLAGDIARGLDDLLARDGFENVAQAVGTKRK 349
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ETR+ L+ + P+ +KIAPDL +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALSALLAGVIETRDGLSRR--VPVFLKIAPDLDRAGIED 222
Query: 118 IADVVLDS 125
IA V +++
Sbjct: 223 IAAVAVET 230
>gi|153005331|ref|YP_001379656.1| dihydroorotate dehydrogenase 2 [Anaeromyxobacter sp. Fw109-5]
gi|166234200|sp|A7HD76.1|PYRD_ANADF RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|152028904|gb|ABS26672.1| Dihydroorotate oxidase [Anaeromyxobacter sp. Fw109-5]
Length = 363
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D + I + A Y VVN+SSPNT LR+LQ +DQL LL+ + A P
Sbjct: 153 DAAADYLACIDRLHPYADYLVVNISSPNTPGLRQLQERDQLDALLRACAGRLRERA--PG 210
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGE 239
P+LVK+APDLS + DV +D+ V G++ +NTT+ R E GGLSG
Sbjct: 211 KPLLVKLAPDLSPTALDEAVDVAIDAG--VSGIVATNTTLSRAGVERHPRAREAGGLSGA 268
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
PL +T ++ Y G++PI+G GGV + + A+ KI+AGA+LVQ+YT VY GP V
Sbjct: 269 PLEALATSVVRRCYIRAAGRVPIVGCGGVMNAEGAYAKIRAGATLVQVYTGLVYGGPGFV 328
Query: 300 TRIKSELEELLQKEGYNSVSQAVGA 324
R+ L LL ++G+ +V++AVGA
Sbjct: 329 RRLNDGLARLLARDGFRTVAEAVGA 353
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L I + A Y VVN+SSPNT LR+LQ +DQL LL+ + A P P+LV
Sbjct: 158 YLACIDRLHPYADYLVVNISSPNTPGLRQLQERDQLDALLRACAGRLRERA--PGKPLLV 215
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
K+APDLS + DV +D+ V GI+
Sbjct: 216 KLAPDLSPTALDEAVDVAIDAGVSGIV 242
>gi|256820992|ref|YP_003142271.1| dihydroorotate dehydrogenase 2 [Capnocytophaga ochracea DSM 7271]
gi|256582575|gb|ACU93710.1| dihydroorotate dehydrogenase [Capnocytophaga ochracea DSM 7271]
Length = 348
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILLKIAPDLTDEQLSD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V ++ + G+I +NTT+ R E L + ++ETGGLSG+PL+N+STE+I + + +
Sbjct: 230 IIEIVQETH--IAGVIATNTTIGR-EGLVSNNQKETGGLSGKPLKNRSTEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+FS DA EK++AGASL+Q+YT F+Y G L+ RI +L
Sbjct: 287 HAFPIIGVGGIFSETDALEKLEAGASLIQLYTGFIYEGAGLIKRINKQL 335
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + + YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+
Sbjct: 159 YLICFKQLFNYVDYFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL+ ++ DI ++V ++
Sbjct: 217 KIAPDLTDEQLSDIIEIVQET 237
>gi|75907445|ref|YP_321741.1| dihydroorotate dehydrogenase 2 [Anabaena variabilis ATCC 29413]
gi|123610220|sp|Q3MDU0.1|PYRD_ANAVT RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|75701170|gb|ABA20846.1| dihydroorotate oxidase A [Anabaena variabilis ATCC 29413]
Length = 376
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 19/218 (8%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ L+S + + + GD YFVVNVSSPNT LR LQ L +L V++ NQ
Sbjct: 170 AEDYLNSFRLLKELGD---YFVVNVSSPNTPGLRSLQDASMLSSILD-VLQKENQ----S 221
Query: 179 LPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYK 230
PI VKIAPDL E + IAD++ L ++ G+I +NTT+ R E +
Sbjct: 222 HKPIFVKIAPDL---EWEAIADIIGLAKTYQLAGIIATNTTIRRDGLKTQVIEQTGKAPQ 278
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
EE GG+SG P+R++STE+I +++ T+G++PIIGVGG+F+ +DA+ KI AGASL+Q+YT
Sbjct: 279 EEAGGISGAPVRDRSTEIIRFIWQQTQGEIPIIGVGGIFTPEDAWAKITAGASLIQVYTG 338
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
++Y GP +V++I + L L++ NS+S+A+G KS
Sbjct: 339 WIYQGPMMVSQILTGLLAKLEEHELNSISEAIGLEFKS 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ L +L V++ NQ PI VKIAPDL
Sbjct: 182 ELGDYFVVNVSSPNTPGLRSLQDASMLSSILD-VLQKENQ----SHKPIFVKIAPDL--- 233
Query: 114 EKKDIADVV 122
E + IAD++
Sbjct: 234 EWEAIADII 242
>gi|17987894|ref|NP_540528.1| dihydroorotate dehydrogenase 2 [Brucella melitensis bv. 1 str. 16M]
gi|225851857|ref|YP_002732090.1| dihydroorotate dehydrogenase 2 [Brucella melitensis ATCC 23457]
gi|256264627|ref|ZP_05467159.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|260563398|ref|ZP_05833884.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|265990450|ref|ZP_06103007.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994278|ref|ZP_06106835.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 3 str. Ether]
gi|384407806|ref|YP_005596427.1| dihydroorotate dehydrogenase 2 [Brucella melitensis M28]
gi|384444427|ref|YP_005603146.1| dihydroorotate oxidase [Brucella melitensis NI]
gi|81851345|sp|Q8YFB1.1|PYRD_BRUME RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|254788880|sp|C0RH28.1|PYRD_BRUMB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|17983628|gb|AAL52792.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|225640222|gb|ACO00136.1| dihydroorotate oxidase [Brucella melitensis ATCC 23457]
gi|260153414|gb|EEW88506.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|262765391|gb|EEZ11180.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 3 str. Ether]
gi|263001234|gb|EEZ13809.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094995|gb|EEZ18703.1| dihydroorotate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|326408353|gb|ADZ65418.1| dihydroorotate dehydrogenase 2 [Brucella melitensis M28]
gi|349742423|gb|AEQ07966.1| dihydroorotate oxidase [Brucella melitensis NI]
Length = 364
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 131/215 (60%), Gaps = 8/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TR----NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
R N +K P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R
Sbjct: 198 ARDEEGNMCTLKR--PVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLK 253
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LV
Sbjct: 254 NPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Q+Y+ +Y GP L I L ++ EG +S+++
Sbjct: 314 QLYSGLIYRGPGLPGEILRGLSTAIKYEGVSSIAE 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR----NQLALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R N LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|84499499|ref|ZP_00997787.1| dihydroorotate dehydrogenase [Oceanicola batsensis HTCC2597]
gi|84392643|gb|EAQ04854.1| dihydroorotate dehydrogenase [Oceanicola batsensis HTCC2597]
Length = 352
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 134/218 (61%), Gaps = 5/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD AD D + + + G + +NVSSPNT NLR LQ L+ LL V E
Sbjct: 137 LNLGANKDSADRSEDYARVLARCGPHVDFATINVSSPNTENLRDLQGAAALEALLLKVTE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L + P+ +KIAPDL+ E D+A +V+ +DG++ +NTT+ R DA +
Sbjct: 197 ARDWLPRRI--PLFLKIAPDLTEAELADVARIVIYRG--IDGIVATNTTLSRRGLTDA-H 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ E GGLSG PL ST +++ ++ LT G +P+IGVGG+ S +DA+ KI+AGAS +Q+YT
Sbjct: 252 RTEKGGLSGAPLFAPSTRVLARLHDLTGGNVPLIGVGGIASAEDAYAKIRAGASALQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ Y G L I L+ LLQ++GY +V++AVG K
Sbjct: 312 ALAYQGLSLAAGILRGLDALLQRDGYANVAEAVGTGRK 349
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
+ + G + +NVSSPNT NLR LQ L+ LL V E R+ L + P+ +KIAP
Sbjct: 156 LARCGPHVDFATINVSSPNTENLRDLQGAAALEALLLKVTEARDWLPRR--IPLFLKIAP 213
Query: 109 DLSLDEKKDIADVVL 123
DL+ E D+A +V+
Sbjct: 214 DLTEAELADVARIVI 228
>gi|400754098|ref|YP_006562466.1| dihydroorotate dehydrogenase PyrD [Phaeobacter gallaeciensis 2.10]
gi|398653251|gb|AFO87221.1| dihydroorotate dehydrogenase PyrD [Phaeobacter gallaeciensis 2.10]
Length = 352
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 143/230 (62%), Gaps = 10/230 (4%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P ++ L+L KD D D K + G+ + VNVSSPNT LR
Sbjct: 125 RLAVRPQDAVI-----GLNLGANKDSGDRAADFAKVLAHCGEHLDFATVNVSSPNTEKLR 179
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ K L LL V++TRN L + P+ +KIAPDL +DIA+V +++ +D +
Sbjct: 180 DLQGKAALSALLNGVIDTRNGLDRRV--PVFLKIAPDLDRAGIEDIAEVAVETG--IDAV 235
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT++R L++ +++E GGLSG PL KST +++++ +L G++P++GVGG+ + +
Sbjct: 236 IATNTTLERTG-LNSSHRDEAGGLSGAPLFEKSTRVLAQLSELLNGRVPLVGVGGISNAE 294
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAV 322
A+ KI AGAS VQ YT+ VY G LV I L++LL ++G+ +V+ AV
Sbjct: 295 QAYAKICAGASAVQFYTAMVYGGLSLVGDIARGLDDLLARDGHANVADAV 344
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G+ + VNVSSPNT LR LQ K L LL V++TRN L + P+ +KIAPDL
Sbjct: 160 GEHLDFATVNVSSPNTEKLRDLQGKAALSALLNGVIDTRNGLDRR--VPVFLKIAPDLDR 217
Query: 113 DEKKDIADVVLDS 125
+DIA+V +++
Sbjct: 218 AGIEDIAEVAVET 230
>gi|395792036|ref|ZP_10471475.1| dihydroorotate dehydrogenase [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423714084|ref|ZP_17688343.1| dihydroorotate dehydrogenase [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421231|gb|EJF87487.1| dihydroorotate dehydrogenase [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395432955|gb|EJF98929.1| dihydroorotate dehydrogenase [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 362
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D GI F DV+ YF +N+SSPNT LR LQA+D L L+ + +
Sbjct: 136 INIGANKDTVDKINDYTAGIAHFYDVSDYFTINISSPNTPGLRALQARDSLHLLMNAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS E DIA+ + S DGLIVSNTT+ R ++
Sbjct: 196 ARNEQKKKHGFSVPIFLKIAPDLSEKELDDIAEEMKFSD--FDGLIVSNTTLSRQGLHNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL +ST ++++M + K+ IIG GGV + A EK+KAGA L+Q+
Sbjct: 254 FLSSEEGGLSGRPLFERSTIVLAKMRQKLGKKIAIIGAGGVRDAQTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ + +Q++G S+
Sbjct: 314 YSGMVYEGPELAITILKEILQCMQQDGVESI 344
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F DV+ YF +N+SSPNT LR LQA+D L L+ + + RN+ K PI
Sbjct: 151 YTAGIAHFYDVSDYFTINISSPNTPGLRALQARDSLHLLMNAISQARNEQKKKHGFSVPI 210
Query: 103 LVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVS 144
+KIAPDLS E DIA+ +KF D V N +
Sbjct: 211 FLKIAPDLSEKELDDIAEE--------MKFSDFDGLIVSNTT 244
>gi|384098792|ref|ZP_09999904.1| dihydroorotate dehydrogenase 2 [Imtechella halotolerans K1]
gi|383834935|gb|EID74366.1| dihydroorotate dehydrogenase 2 [Imtechella halotolerans K1]
Length = 338
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR+LQ K+ L LLKT+ + RN++ +KP PIL+KIAPDL+ D+ D
Sbjct: 172 YFVVNVSSPNTPNLRELQDKEPLTALLKTL-QQRNEMQIKP-KPILLKIAPDLTNDQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I D+V + ++ G+I +NTT+ R L + ++E GGLSG+PL+++STE+I + + +
Sbjct: 230 IIDIV--KQTQIAGVIATNTTIARGG-LHSLNQKEMGGLSGKPLKSRSTEVIRFLSEQSG 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ S +DA EK+ AGASLVQ+YT F+Y GP L+ I L
Sbjct: 287 KAFPIIGVGGIHSAEDALEKLDAGASLVQLYTGFIYEGPKLIKNINQAL 335
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR+LQ K+ L LLKT ++ RN++ +KP PIL+KIAPDL+ D+ D
Sbjct: 172 YFVVNVSSPNTPNLRELQDKEPLTALLKT-LQQRNEMQIKP-KPILLKIAPDLTNDQLLD 229
Query: 118 IADVV 122
I D+V
Sbjct: 230 IIDIV 234
>gi|395778614|ref|ZP_10459126.1| dihydroorotate dehydrogenase [Bartonella elizabethae Re6043vi]
gi|423715073|ref|ZP_17689297.1| dihydroorotate dehydrogenase [Bartonella elizabethae F9251]
gi|395417822|gb|EJF84159.1| dihydroorotate dehydrogenase [Bartonella elizabethae Re6043vi]
gi|395430557|gb|EJF96599.1| dihydroorotate dehydrogenase [Bartonella elizabethae F9251]
Length = 360
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D GI F DVA YF VN+SSPNT LR LQA+D L LL + +
Sbjct: 136 VNIGANKDTVNKIDDYTVGIAHFYDVADYFTVNISSPNTPGLRDLQARDSLHLLLNAISK 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K PI +KIAPDLS E DIA+ + S DGLIVSNTT+ R ++
Sbjct: 196 ARKEQEKKRGFSIPIFLKIAPDLSEKELDDIAEEIKLSD--FDGLIVSNTTLSRQGLTNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + ++ IIGVGGV K A EK+KAGA L+Q+
Sbjct: 254 PFSNEEGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVKDAKTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP LV I E+ ++Q++G +++
Sbjct: 314 YSGMVYEGPNLVVTILKEILRMMQQDGVDNI 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ +GI F DVA YF VN+SSPNT LR LQA+D L LL + + R + K PI
Sbjct: 151 YTVGIAHFYDVADYFTVNISSPNTPGLRDLQARDSLHLLLNAISKARKEQEKKRGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDLS E DIA+ +
Sbjct: 211 FLKIAPDLSEKELDDIAEEI 230
>gi|172036040|ref|YP_001802541.1| dihydroorotate dehydrogenase 2 [Cyanothece sp. ATCC 51142]
gi|226710757|sp|B1WUM4.1|PYRD_CYAA5 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|171697494|gb|ACB50475.1| dihydroorotate dehydrogenase [Cyanothece sp. ATCC 51142]
Length = 379
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 153/268 (57%), Gaps = 21/268 (7%)
Query: 69 ANLRKLQAKDQ-LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVK 127
A L +L A +Q + + +T+ ET + P + I +L + + +D V
Sbjct: 125 AALNRLGANNQGAQKVAQTLKETWQR------QPRQIPIGINLCKSKITPLEQAAMDYVG 178
Query: 128 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIA 187
+ A YFVVNVSSPNT LR LQ +QL +L+ + ++ N L PILVKI+
Sbjct: 179 SFRYLEEDADYFVVNVSSPNTPGLRSLQEGEQLNVILQEL-QSVNSLT----KPILVKIS 233
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEP 240
PDLS + K I + L ++ G+I +NTT+ R E +EE GG+SG+P
Sbjct: 234 PDLSWESIKLI--IKLAKTYQLAGIIATNTTIKREGLKTNILEKTGNSIQEEAGGISGQP 291
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
+R +STE+I +Y+ T+G LPIIGVGG+F+ +DA+EKI +GASL+Q+YT ++Y GP ++
Sbjct: 292 IRQRSTEVIRFIYEQTQGTLPIIGVGGIFTAEDAWEKITSGASLLQLYTGWIYQGPWCIS 351
Query: 301 RIKSELEELLQKEGYNSVSQAVGAAHKS 328
I L L+K + +S+AVG S
Sbjct: 352 NINRGLVRKLEKYKLSHISEAVGMDFNS 379
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ +QL +L+ +++ N L PILVKI+PDLS +
Sbjct: 187 ADYFVVNVSSPNTPGLRSLQEGEQLNVILQE-LQSVNSLT----KPILVKISPDLSWESI 241
Query: 116 KDI 118
K I
Sbjct: 242 KLI 244
>gi|443244081|ref|YP_007377306.1| dihydroorotate dehydrogenase [Nonlabens dokdonensis DSW-6]
gi|442801480|gb|AGC77285.1| dihydroorotate dehydrogenase [Nonlabens dokdonensis DSW-6]
Length = 348
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 125/190 (65%), Gaps = 9/190 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP- 178
D V D + K D YF VNVSSPNT LR+LQ + L H+L+T+ + ++ KP
Sbjct: 160 DAVNDYIICFEKLFDHVDYFTVNVSSPNTPGLRELQDRKPLTHILQTLQDLNDK---KPQ 216
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK--EETGGL 236
PIL+KIAPDL+ D+ DI +V D+K +DG+I SNTT+ R E L + + GGL
Sbjct: 217 RKPILLKIAPDLTDDQLLDIIGIVADTK--IDGVIASNTTISR-EGLQSEESLVNQAGGL 273
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG PL N++TE+IS +++ + G PIIGVGG+ + +DA +K+ AGASLVQ+YT FVY GP
Sbjct: 274 SGAPLTNRATEVISFLHQKSNGAFPIIGVGGIMTAQDAIDKLNAGASLVQLYTGFVYEGP 333
Query: 297 PLVTRIKSEL 306
L+ +I E+
Sbjct: 334 ALIKKINEEI 343
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPIL 103
+++ K D YF VNVSSPNT LR+LQ + L H+L+T+ + ++ KP PIL
Sbjct: 165 YIICFEKLFDHVDYFTVNVSSPNTPGLRELQDRKPLTHILQTLQDLNDK---KPQRKPIL 221
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+KIAPDL+ D+ DI +V D+ + G++
Sbjct: 222 LKIAPDLTDDQLLDIIGIVADTKIDGVI 249
>gi|423711111|ref|ZP_17685431.1| dihydroorotate dehydrogenase [Bartonella washoensis Sb944nv]
gi|395415025|gb|EJF81460.1| dihydroorotate dehydrogenase [Bartonella washoensis Sb944nv]
Length = 363
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 131/211 (62%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D GI F DVA+YF +N+SSPNT LR LQ +D L+ LL + +
Sbjct: 136 INVGANKDTVNRIDDYTAGIACFYDVANYFTINISSPNTPGLRDLQVRDSLRLLLNAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K L PI +KIAPDLS +E D+A+ + S DGLI+SNTT+ R ++
Sbjct: 196 ARSEQKEKCGFLVPIFLKIAPDLSEEELDDVAEEIKFSD--FDGLIISNTTLSRKGLTNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL +ST ++++M + ++ IIGVGGV A EK+KAGA L+Q+
Sbjct: 254 LLASEEGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVRDAYTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ +L+Q++G +++
Sbjct: 314 YSGMVYEGPHLAVTILKEVLQLMQQDGVDTI 344
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F DVA+YF +N+SSPNT LR LQ +D L+ LL + + R++ K L PI
Sbjct: 151 YTAGIACFYDVANYFTINISSPNTPGLRDLQVRDSLRLLLNAISQARSEQKEKCGFLVPI 210
Query: 103 LVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVS 144
+KIAPDLS +E D+A+ + KF D + N +
Sbjct: 211 FLKIAPDLSEEELDDVAEEI--------KFSDFDGLIISNTT 244
>gi|86137369|ref|ZP_01055946.1| dihydroorotate dehydrogenase [Roseobacter sp. MED193]
gi|85825704|gb|EAQ45902.1| dihydroorotate dehydrogenase [Roseobacter sp. MED193]
Length = 352
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + G + VNVSSPNT LR LQ K L LL V+
Sbjct: 137 LNLGANKDSDDRAADFARVLAHCGAHLDFATVNVSSPNTEKLRDLQGKAALSALLSGVIA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR+ L + P+ +KIAPDL +DIA V L++ +D +I +NTT+ R E L + +
Sbjct: 197 TRDGLQKRV--PVFLKIAPDLDRAGIEDIAAVALETG--IDAVIATNTTLSR-EGLQSAH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++E GGLSG PL KST +++++ +L G++P++GVGG+ + A+ KI AGAS VQ+YT
Sbjct: 252 RDEAGGLSGAPLFEKSTRVLAQLSELLDGRVPLVGVGGISDAQQAYAKICAGASAVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G L + I L++LL K+G+ SV+ AVG+
Sbjct: 312 AMVYQGLSLGSEIAQGLDQLLAKDGHESVAAAVGS 346
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ TR+ L+ P+ +KIAPDL +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALSALLSGVIATRD--GLQKRVPVFLKIAPDLDRAGIED 222
Query: 118 IADVVLDS 125
IA V L++
Sbjct: 223 IAAVALET 230
>gi|17231764|ref|NP_488312.1| dihydroorotate dehydrogenase 2 [Nostoc sp. PCC 7120]
gi|30173351|sp|Q8YPC6.1|PYRD_NOSS1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|17133407|dbj|BAB75971.1| dihydroorotate oxidase [Nostoc sp. PCC 7120]
Length = 376
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 137/218 (62%), Gaps = 19/218 (8%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ L+S + + + GD YFVVNVSSPNT LR LQ L +L + + N
Sbjct: 170 AEDYLNSFRLLKELGD---YFVVNVSSPNTPGLRSLQDASMLSSILDVLQKENNSHK--- 223
Query: 179 LPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYK 230
PI VKIAPDL E + IAD++ L ++ G+I +NTT+ R E +
Sbjct: 224 --PIFVKIAPDL---EWEAIADIIGLAKTYQLAGIIATNTTIRRDGLKTQVIEQTGKAPQ 278
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
EE GG+SG P+R++STE+I +++ T+G++PIIGVGG+F+ +DA+ KI AGASL+Q+YT
Sbjct: 279 EEAGGISGAPVRDRSTEIIRFIWQQTQGEIPIIGVGGIFTPEDAWAKITAGASLIQVYTG 338
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
++Y GP +V++I + L L++ NS+S+A+G KS
Sbjct: 339 WIYQGPMMVSQILTGLLSKLEEHELNSISEAIGLEFKS 376
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ L +L + + N PI VKIAPDL
Sbjct: 182 ELGDYFVVNVSSPNTPGLRSLQDASMLSSILDVLQKENNSHK-----PIFVKIAPDL--- 233
Query: 114 EKKDIADVV 122
E + IAD++
Sbjct: 234 EWEAIADII 242
>gi|444914906|ref|ZP_21235045.1| Dihydroorotate dehydrogenase [Cystobacter fuscus DSM 2262]
gi|444714183|gb|ELW55070.1| Dihydroorotate dehydrogenase [Cystobacter fuscus DSM 2262]
Length = 360
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 12/228 (5%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P+ V I + ++ + D V V + GD Y VVN SSPNT LR+LQ + L
Sbjct: 141 PVGVNIGKNKDTPLERAVDDYVA-CVDALAPLGD---YVVVNASSPNTPGLRQLQEPELL 196
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
LL+ V Q+A P P+ +KIAPDL+ + ++ DV C + GLI +NTT+
Sbjct: 197 TALLQAVQARLAQVA--PGKPLFLKIAPDLTPEAVDEVVDVA--RACGLAGLIATNTTIA 252
Query: 221 R-YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIK 279
R +E+ A+ E GGLSG P+R + +I Y + G LPIIGVGGVF+ +D +EK++
Sbjct: 253 RPFEHPVAK---EAGGLSGAPVREAANAVIRRAYARSGGTLPIIGVGGVFTAEDVYEKLR 309
Query: 280 AGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
AGAS+VQ+YT F+Y GP +V R+ + L LL ++G SV +A+GA H+
Sbjct: 310 AGASVVQVYTGFIYEGPGMVRRLLAGLGPLLARDGLGSVREAIGAEHR 357
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y VVN SSPNT LR+LQ + L LL+ V Q+A P P+ +KIAPDL+ + +
Sbjct: 174 YVVVNASSPNTPGLRQLQEPELLTALLQAVQARLAQVA--PGKPLFLKIAPDLTPEAVDE 231
Query: 118 IADVV 122
+ DV
Sbjct: 232 VVDVA 236
>gi|294655293|ref|XP_457412.2| DEHA2B10560p [Debaryomyces hansenii CBS767]
gi|199429841|emb|CAG85416.2| DEHA2B10560p [Debaryomyces hansenii CBS767]
Length = 447
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 131/208 (62%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A +VNVSSPNT LR LQ++ +L +LL TVV+ RN L
Sbjct: 230 KNKFGDEVTDYVKGVSRLGPYADVLIVNVSSPNTPGLRDLQSESKLTNLLATVVKERNTL 289
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYL---DA 227
V L PP+LVK+APDL+ E + IA+ KVDG+I+SNTT+ R E L +
Sbjct: 290 GVNLLNKKPPVLVKVAPDLTEPEIESIANSA--KAAKVDGIIISNTTIQRPTENLLTTNT 347
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+TGGLSG+PL+ S + + + K TK L ++G GG+ SGKDA E KAGA+ ++
Sbjct: 348 NLINQTGGLSGKPLKPLSLKALKTLRKYTKDSDLVLVGCGGISSGKDALEFGKAGATFIE 407
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP L ++I+ EL L+KEG
Sbjct: 408 LYTAFAYKGPALPSKIRDELVVELKKEG 435
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL---PP 101
++ G+ + G A +VNVSSPNT LR LQ++ +L +LL TVV+ RN L + L PP
Sbjct: 240 YVKGVSRLGPYADVLIVNVSSPNTPGLRDLQSESKLTNLLATVVKERNTLGVNLLNKKPP 299
Query: 102 ILVKIAPDLSLDEKKDIAD 120
+LVK+APDL+ E + IA+
Sbjct: 300 VLVKVAPDLTEPEIESIAN 318
>gi|354552846|ref|ZP_08972153.1| Dihydroorotate dehydrogenase [Cyanothece sp. ATCC 51472]
gi|353554676|gb|EHC24065.1| Dihydroorotate dehydrogenase [Cyanothece sp. ATCC 51472]
Length = 378
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 153/268 (57%), Gaps = 21/268 (7%)
Query: 69 ANLRKLQAKDQ-LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVK 127
A L +L A +Q + + +T+ ET + P + I +L + + +D V
Sbjct: 124 AALNRLGANNQGAQKVAQTLKETWQR------QPRQIPIGINLCKSKITPLEQAAMDYVG 177
Query: 128 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIA 187
+ A YFVVNVSSPNT LR LQ +QL +L+ + ++ N L PILVKI+
Sbjct: 178 SFRYLEEDADYFVVNVSSPNTPGLRSLQEGEQLNVILQEL-QSVNSLT----KPILVKIS 232
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEP 240
PDLS + K I + L ++ G+I +NTT+ R E +EE GG+SG+P
Sbjct: 233 PDLSWESIKLI--IKLAKTYQLAGIIATNTTIKREGLKTNILEKTGNSIQEEAGGISGQP 290
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
+R +STE+I +Y+ T+G LPIIGVGG+F+ +DA+EKI +GASL+Q+YT ++Y GP ++
Sbjct: 291 IRQRSTEVIRFIYEQTQGTLPIIGVGGIFTAEDAWEKITSGASLLQLYTGWIYQGPWCIS 350
Query: 301 RIKSELEELLQKEGYNSVSQAVGAAHKS 328
I L L+K + +S+AVG S
Sbjct: 351 NINRGLVRKLEKYKLSHISEAVGMDFNS 378
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ +QL +L+ +++ N L PILVKI+PDLS +
Sbjct: 186 ADYFVVNVSSPNTPGLRSLQEGEQLNVILQE-LQSVNSLT----KPILVKISPDLSWESI 240
Query: 116 KDI 118
K I
Sbjct: 241 KLI 243
>gi|425458959|ref|ZP_18838445.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9808]
gi|389823446|emb|CCI28344.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9808]
Length = 382
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I ++ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 RTIIELAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYQQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++Q VG
Sbjct: 362 KLEVNGLTNINQGVG 376
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+ I ++ Y + + + NT R L K + E ++
Sbjct: 244 RTIIELAFS-------------YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
+PL
Sbjct: 291 GQPL 294
>gi|83859574|ref|ZP_00953094.1| dihydroorotate dehydrogenase [Oceanicaulis sp. HTCC2633]
gi|83851933|gb|EAP89787.1| dihydroorotate dehydrogenase [Oceanicaulis sp. HTCC2633]
Length = 347
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 138/240 (57%), Gaps = 14/240 (5%)
Query: 84 LKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNV 143
+K +E R K P+ V + + +++ ++L ++ G+ A +F VN+
Sbjct: 119 VKARLEARQDRPSKAEGPVGVNLGANKDSEDRASDYAILLKALSGL------ADFFTVNI 172
Query: 144 SSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVL 203
SSPNT LR LQ+ D L LLK V + R P+ +K+APDL + I V
Sbjct: 173 SSPNTPGLRTLQSGDALDELLKKVNDARWA------EPVFLKVAPDLDEAGIETIVKAV- 225
Query: 204 DSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPII 263
+ GLIVSNTT++R E L +R+K E GGLSG PL+ +STE++ + +L LPII
Sbjct: 226 -ETHALSGLIVSNTTLERPESLQSRHKGEAGGLSGLPLKTRSTEVLRQFRRLAGPDLPII 284
Query: 264 GVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GVGG+ A+ +I+AGA+ VQ+YT+ VY GP L RI+ L + L+ +G+ VS+AVG
Sbjct: 285 GVGGIDGPDAAYARIRAGANAVQLYTALVYQGPGLALRIREGLAQRLKADGFEHVSEAVG 344
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+A +F VN+SSPNT LR LQ+ D L LLK V + R P+ +K+APDL
Sbjct: 164 LADFFTVNISSPNTPGLRTLQSGDALDELLKKVNDARWA------EPVFLKVAPDL 213
>gi|190890237|ref|YP_001976779.1| dihydroorotate dehydrogenase 2 [Rhizobium etli CIAT 652]
gi|226710775|sp|B3PNN8.1|PYRD_RHIE6 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|190695516|gb|ACE89601.1| dihydroorotate dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 362
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRITDYVAGIRCFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A + P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAERSGRKIPVFLKIAPDLTEEGMDDIAAEALAHP--LDGLIVSNTTLSREGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +ETGGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKETGGLSGVPLFEKSTAVLARMRKRVGAALPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L LL +E S+ +
Sbjct: 316 YSCMVYEGPGLPGNIVRGLSGLLDREKAGSIRE 348
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R+++A + P+
Sbjct: 153 YVAGIRCFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEMAERSGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|357383441|ref|YP_004898165.1| dihydroorotate dehydrogenase [Pelagibacterium halotolerans B2]
gi|351592078|gb|AEQ50415.1| dihydroorotate dehydrogenase [Pelagibacterium halotolerans B2]
Length = 366
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 128/217 (58%), Gaps = 6/217 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D + G+ F +A Y N+SSPNT LR LQA+D LK LL ++E
Sbjct: 144 VNIGANKDSEDFVADYIAGVKAFSPLADYLTANISSPNTPGLRNLQAEDALKRLLDALIE 203
Query: 170 TRNQLAVKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
TR A +P PIL+KIAPDL E IA VL+S +DGLIVSNTT+ R
Sbjct: 204 TR---AAQPRQTPILLKIAPDLEQAEMDSIARTVLESG--IDGLIVSNTTISRDTVSGLE 258
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+ GGLSG+PL N +T +++M PIIGVGG+ S + A K++AGA++VQ+Y
Sbjct: 259 NAGQAGGLSGKPLFNLATRRLAQMRLRLGPDFPIIGVGGIHSAQSAVAKLEAGANVVQLY 318
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
++ VY G ++ IKS L + + G +V+ G A
Sbjct: 319 SALVYGGLEMIEEIKSGLSQEIAARGLANVAGLTGTA 355
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPIL 103
++ G+ F +A Y N+SSPNT LR LQA+D LK LL ++ETR A +P PIL
Sbjct: 159 YIAGVKAFSPLADYLTANISSPNTPGLRNLQAEDALKRLLDALIETR---AAQPRQTPIL 215
Query: 104 VKIAPDLSLDEKKDIADVVLDS 125
+KIAPDL E IA VL+S
Sbjct: 216 LKIAPDLEQAEMDSIARTVLES 237
>gi|390440698|ref|ZP_10228909.1| Dihydroorotate dehydrogenase [Microcystis sp. T1-4]
gi|389835986|emb|CCI33035.1| Dihydroorotate dehydrogenase [Microcystis sp. T1-4]
Length = 382
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 126/196 (64%), Gaps = 16/196 (8%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL E
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDL---EW 240
Query: 196 KDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTE 247
+DI ++ L ++ G++ +NTT R EE GG+SG+PLR +STE
Sbjct: 241 EDITMIIELAFSYQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTE 300
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L
Sbjct: 301 VIRFIYQQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLT 360
Query: 308 ELLQKEGYNSVSQAVG 323
E L+ G +++Q VG
Sbjct: 361 EKLEANGLTNINQGVG 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 8/67 (11%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL E
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDL---EW 240
Query: 116 KDIADVV 122
+DI ++
Sbjct: 241 EDITMII 247
>gi|417104338|ref|ZP_11961436.1| dihydroorotate dehydrogenase protein [Rhizobium etli CNPAF512]
gi|327190887|gb|EGE57945.1| dihydroorotate dehydrogenase protein [Rhizobium etli CNPAF512]
Length = 362
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRITDYVAGIRCFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A + P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAERSGRKIPVFLKIAPDLTEEGMDDIAAEALAHP--LDGLIVSNTTLSREGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +ETGGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKETGGLSGVPLFEKSTAVLARMRKRVGATLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L LL +E S+ +
Sbjct: 316 YSCMVYEGPGLPGNIVRGLSGLLDREKAGSIRE 348
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R+++A + P+
Sbjct: 153 YVAGIRCFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEMAERSGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|367005264|ref|XP_003687364.1| hypothetical protein TPHA_0J01080 [Tetrapisispora phaffii CBS 4417]
gi|357525668|emb|CCE64930.1| hypothetical protein TPHA_0J01080 [Tetrapisispora phaffii CBS 4417]
Length = 430
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 137/231 (59%), Gaps = 23/231 (9%)
Query: 105 KIAPDLSLDEKK---------DIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
K A +LSL+E K D V D +KG+ +F +A V+NVSSPNT LR LQ
Sbjct: 190 KQASNLSLNENKLLGINLGKNKTGDEVQDYLKGVERFQSLADVLVINVSSPNTPGLRDLQ 249
Query: 156 AKDQLKHLLKTVVETRNQL--------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKC 207
+ +L +LL +V+ R+ L A + PPILVKIAPDL+ + I + SK
Sbjct: 250 NEKKLTNLLTQIVKKRDSLIDQGNALGAKEHKPPILVKIAPDLAEPALQSIVEAAKTSK- 308
Query: 208 KVDGLIVSNTTVDRYEYL---DARYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPII 263
+DG+IVSNTT++R E L D + + GGLSG+PL+ S + + K TK L ++
Sbjct: 309 -IDGIIVSNTTIERPETLKTTDNQLINQPGGLSGKPLKIYSLNALRNVAKYTKDSNLVLV 367
Query: 264 GVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
G GG+ SGKDA E KAGA+ VQ+YT++ Y GP L+ IK E+ E LQKEG
Sbjct: 368 GCGGISSGKDAIEFAKAGATFVQVYTAYAYKGPGLIANIKDEITEELQKEG 418
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL------- 94
+Q +L G+ +F +A V+NVSSPNT LR LQ + +L +LL +V+ R+ L
Sbjct: 216 VQDYLKGVERFQSLADVLVINVSSPNTPGLRDLQNEKKLTNLLTQIVKKRDSLIDQGNAL 275
Query: 95 -ALKPLPPILVKIAPDLS 111
A + PPILVKIAPDL+
Sbjct: 276 GAKEHKPPILVKIAPDLA 293
>gi|103486173|ref|YP_615734.1| dihydroorotate dehydrogenase 2 [Sphingopyxis alaskensis RB2256]
gi|123078545|sp|Q1GVC1.1|PYRD_SPHAL RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|98976250|gb|ABF52401.1| dihydroorotate oxidase A [Sphingopyxis alaskensis RB2256]
Length = 356
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 6/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D KG +A Y VN+SSPNT LR LQ + L+ LL V
Sbjct: 146 INIGANKDSADRIADYAKGTAAMAPLADYLTVNISSPNTPGLRALQDRGALEALLDGVAA 205
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ A KP + +K+APDL + DI V LD +IVSNTTV R L +R+
Sbjct: 206 AQPAGAAKP---VFLKVAPDLEPADIDDIVAVALDRGLAA--VIVSNTTVARPP-LASRH 259
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL + + + + + G+LP+I GG+ S + A+E+I+AGASLVQ+Y+
Sbjct: 260 AVEAGGLSGAPLAQLALQCVQDFRAASGGRLPLIAAGGIASAEQAWERIRAGASLVQVYS 319
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ V+ GP L +RI LE L ++G+ VS AVGA
Sbjct: 320 AMVFEGPGLASRIARGLETLAARDGFARVSDAVGA 354
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G +A Y VN+SSPNT LR LQ + L+ LL V + A K P+ +K+A
Sbjct: 164 GTAAMAPLADYLTVNISSPNTPGLRALQDRGALEALLDGVAAAQPAGAAK---PVFLKVA 220
Query: 108 PDLSLDEKKDIADVVLD 124
PDL + DI V LD
Sbjct: 221 PDLEPADIDDIVAVALD 237
>gi|403746076|ref|ZP_10954733.1| dihydroorotate dehydrogenase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120960|gb|EJY55298.1| dihydroorotate dehydrogenase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 353
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 6/206 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ + D VK + DVA Y VN+SSPNT LR LQ+ L LL + R +
Sbjct: 151 EAISDYVKALKAVADVADYIAVNISSPNTPGLRDLQSVSFLLDLLAAIEPVRASHNL--- 207
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVD-GLIVSNTTVDRYEYLDARYKEETGGLSG 238
P+ VKI+PDL+ + I + +S ++ GLI +NTTV+R L ++ + E GGLSG
Sbjct: 208 -PVFVKISPDLADESVIAIGQALANSPYALNLGLIATNTTVERGG-LRSKERSEGGGLSG 265
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+PL ++ST ++ + KLPIIG GGVF+ DA+ KI+AGASLVQIYTSF+Y GP +
Sbjct: 266 KPLADRSTAVVRLLAGAVARKLPIIGCGGVFTAADAYAKIRAGASLVQIYTSFIYRGPQV 325
Query: 299 VTRIKSELEELLQKEGYNSVSQAVGA 324
V I L++LL+ +G++ V +A+GA
Sbjct: 326 VREIAEGLDKLLEADGFHHVREAIGA 351
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
DVA Y VN+SSPNT LR LQ+ L LL + R L P+ VKI+PDL+
Sbjct: 165 DVADYIAVNISSPNTPGLRDLQSVSFLLDLLAAIEPVRASHNL----PVFVKISPDLA 218
>gi|261218334|ref|ZP_05932615.1| dihydroorotate dehydrogenase [Brucella ceti M13/05/1]
gi|261320817|ref|ZP_05960014.1| dihydroorotate dehydrogenase 2 [Brucella ceti M644/93/1]
gi|260923423|gb|EEX89991.1| dihydroorotate dehydrogenase [Brucella ceti M13/05/1]
gi|261293507|gb|EEX97003.1| dihydroorotate dehydrogenase 2 [Brucella ceti M644/93/1]
Length = 364
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 8/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F +A YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLE 197
Query: 170 TR----NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
R N +K P+ +KIAPDL+ +E DIA D++ K+DG+IVSNTT+ R
Sbjct: 198 ARDEEGNMCTLKR--PVFLKIAPDLTDEELDDIA-AEADAQ-KLDGIIVSNTTLSRSGLK 253
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG PL +ST +++ M + +P+IGVGG+ S + A KIKAGA LV
Sbjct: 254 NPENSNETGGLSGAPLFERSTVVLARMRERVGPDMPLIGVGGIDSAETALAKIKAGADLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Q+YT +Y P L I L ++ EG +S+++
Sbjct: 314 QLYTGLIYRSPGLPGEILRGLSTAIKHEGVSSIAE 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR----NQLALKPLP 100
++ GI +F +A YF VN+SSPNT LR LQA++ L LL V+E R N LK
Sbjct: 153 YVAGIRRFYQLARYFTVNISSPNTPGLRNLQAREALHELLSRVLEARDEEGNMCTLK--R 210
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+ +KIAPDL+ +E DIA
Sbjct: 211 PVFLKIAPDLTDEELDDIA 229
>gi|82621721|gb|ABB86537.1| dihydroorotate dehydrogenase [uncultured Bacteroidetes bacterium
'SBI2-18 P41A3']
Length = 344
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 8/196 (4%)
Query: 112 LDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR 171
L + KD A L K + + D YF +NVSSPNT NLR LQ KD L+ LL+++ E +
Sbjct: 149 LTDNKDAASDYLICFKKLFPYVD---YFAINVSSPNTENLRDLQYKDNLQLLLRSIQE-K 204
Query: 172 NQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA-RYK 230
N +KP PIL+KIAPDLS D+ D+ DVV +DG+I +NTT+ R +
Sbjct: 205 NNTYLKP-KPILLKIAPDLSNDQLLDVIDVV--KLTLIDGIIATNTTLSRKNLKSSIDLT 261
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+ GGLSG P+R KST++I +++ + G +PIIGVGG+ S +DA +KIKAGASL+Q+YT
Sbjct: 262 TQKGGLSGAPVREKSTQVIKFLHEKSNGTIPIIGVGGIMSPEDALDKIKAGASLIQLYTG 321
Query: 291 FVYHGPPLVTRIKSEL 306
FVY GP LV +I +
Sbjct: 322 FVYSGPRLVKQINKSI 337
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ K YF +NVSSPNT NLR LQ KD L+ LL+++ E +N LKP PIL+
Sbjct: 159 YLICFKKLFPYVDYFAINVSSPNTENLRDLQYKDNLQLLLRSIQE-KNNTYLKP-KPILL 216
Query: 105 KIAPDLSLDEKKDIADVV-LDSVKGIL 130
KIAPDLS D+ D+ DVV L + GI+
Sbjct: 217 KIAPDLSNDQLLDVIDVVKLTLIDGII 243
>gi|429751930|ref|ZP_19284819.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429178365|gb|EKY19644.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 342
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ LK LL T+ E +N P PIL+KIAPDL+ +
Sbjct: 168 DYVDYFVVNVSSPNTPNLRSLQEKEPLKQLLNTLQE-KNSSKENP-KPILLKIAPDLTDE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI ++V + + G+I +NTT+ R E L + K+ETGGLSG+PLR ++TE+I +
Sbjct: 226 QLLDIIEIV--KETHIAGVIATNTTISR-EGLHSDNKKETGGLSGKPLRERATEVIRFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + PIIGVGG+FS +DA EK++AGASLVQ+YT F+Y G L+ RI +L
Sbjct: 283 EKSGKAFPIIGVGGIFSEEDALEKLEAGASLVQLYTGFIYEGAGLIKRINKKL 335
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + D YFVVNVSSPNT NLR LQ K+ LK LL T+ E +N P PIL+
Sbjct: 159 YLICFEQLFDYVDYFVVNVSSPNTPNLRSLQEKEPLKQLLNTLQE-KNSSKENP-KPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL+ ++ DI ++V ++
Sbjct: 217 KIAPDLTDEQLLDIIEIVKET 237
>gi|88607083|ref|YP_505574.1| dihydroorotate dehydrogenase 2 [Anaplasma phagocytophilum HZ]
gi|88598146|gb|ABD43616.1| dihydroorotate dehydrogenase [Anaplasma phagocytophilum HZ]
Length = 350
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 129/189 (68%), Gaps = 3/189 (1%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y +N+SSPNTA LR+LQ ++ L +L +V + R + PIL+KI PDLS +
Sbjct: 161 LSSYITINLSSPNTAGLRELQKRNSLNEILASVRKARYAVDHAESVPILLKIDPDLSDEV 220
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYK 254
+D+ D VL + K++G+IVSNTT + ++ L + GGLSG+PL + ST +++++Y
Sbjct: 221 LQDVVDEVL--RHKINGIIVSNTTTN-FKLLGTKAPISRGGLSGQPLFSLSTRVLADVYS 277
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
T+G++ ++G GGV SG A EKI+AGASLVQ+YT+ VY G ++ +I EL +LL ++G
Sbjct: 278 QTRGRVVLVGCGGVSSGAQALEKIRAGASLVQLYTAIVYGGFGIIDKINMELADLLTRDG 337
Query: 315 YNSVSQAVG 323
+N V QAVG
Sbjct: 338 FNKVEQAVG 346
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y +N+SSPNTA LR+LQ ++ L +L +V + R + PIL+KI PDLS +
Sbjct: 161 LSSYITINLSSPNTAGLRELQKRNSLNEILASVRKARYAVDHAESVPILLKIDPDLSDEV 220
Query: 115 KKDIADVVL-DSVKGILKFGDVAHYFVVNVSSP 146
+D+ D VL + GI+ ++ ++ +P
Sbjct: 221 LQDVVDEVLRHKINGIIVSNTTTNFKLLGTKAP 253
>gi|114799261|ref|YP_762159.1| dihydroorotate oxidase [Hyphomonas neptunium ATCC 15444]
gi|114739435|gb|ABI77560.1| dihydroorotate oxidase [Hyphomonas neptunium ATCC 15444]
Length = 349
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 119/210 (56%), Gaps = 7/210 (3%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET-RNQ 173
KD D + D V GI A+Y +N+SSPNT LR LQ K L LL E R
Sbjct: 143 NKDTEDRIADYVTGIEAVAPYANYITINISSPNTPGLRGLQDKASLTELLSRCGEADRKD 202
Query: 174 LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET 233
L P+ +K+APDL D DI VV + GLIVSNTT+ R L + K E
Sbjct: 203 L------PVFLKVAPDLDEDAIADICGVVGAQGAWLSGLIVSNTTLARPPSLRSDDKSEA 256
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GGLSG PL STE++ + + G +IG GG+ +G+DA+ KI+AGAS VQ+Y+ VY
Sbjct: 257 GGLSGVPLLQPSTEVLRQFARKLDGAFDLIGAGGIGTGRDAYAKIRAGASAVQLYSLMVY 316
Query: 294 HGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GP + R+ EL L ++G++S++ AVG
Sbjct: 317 DGPGIAARVARELSHCLAEDGFSSIADAVG 346
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET-RNQLALKPLPPIL 103
++ GI A+Y +N+SSPNT LR LQ K L LL E R L P+
Sbjct: 153 YVTGIEAVAPYANYITINISSPNTPGLRGLQDKASLTELLSRCGEADRKDL------PVF 206
Query: 104 VKIAPDLSLDEKKDIADVV 122
+K+APDL D DI VV
Sbjct: 207 LKVAPDLDEDAIADICGVV 225
>gi|393245375|gb|EJD52885.1| hypothetical protein AURDEDRAFT_80968 [Auricularia delicata
TFB-10046 SS5]
Length = 455
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 121/201 (60%), Gaps = 6/201 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K AD D V+G+ KF A VVNVSSPNT LR LQ ++ L+ LL +VV R+
Sbjct: 204 KSSPADSPDDYVEGVRKFAPWADVLVVNVSSPNTPGLRNLQKREALEKLLGSVVAARDAT 263
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSK-CKVDGLIVSNTTVDRYEYLDARYKEET 233
KP +++KIAPDLS + D+ DV + K C VDG+IVSNTT+ R L + K ET
Sbjct: 264 ETKPR--LVLKIAPDLS---ESDLVDVAIAVKSCGVDGVIVSNTTIQRPRNLSSGNKTET 318
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GGLSG PL S + + +P+IG GG+ SG DA ++GAS VQ+YT+F Y
Sbjct: 319 GGLSGSPLLPLSLTALRILRTHLPPSIPLIGCGGISSGADALAFAQSGASAVQLYTAFAY 378
Query: 294 HGPPLVTRIKSELEELLQKEG 314
GP RIK EL ELL++EG
Sbjct: 379 DGPGAPRRIKDELAELLRREG 399
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ KF A VVNVSSPNT LR LQ ++ L+ LL +VV R+ KP +++
Sbjct: 214 YVEGVRKFAPWADVLVVNVSSPNTPGLRNLQKREALEKLLGSVVAARDATETKPR--LVL 271
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDLS + D+A V
Sbjct: 272 KIAPDLSESDLVDVAIAV 289
>gi|408787302|ref|ZP_11199033.1| dihydroorotate dehydrogenase 2 [Rhizobium lupini HPC(L)]
gi|424909382|ref|ZP_18332759.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392845413|gb|EJA97935.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|408486933|gb|EKJ95256.1| dihydroorotate dehydrogenase 2 [Rhizobium lupini HPC(L)]
Length = 363
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 138 VNIGANKDSEDRIADYVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLSAVLE 197
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R A + P+ +KIAPDL+ + D+A+ L +DGLIVSNTT+ R +
Sbjct: 198 RRRAEAERFGRRIPVFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSRDGLRAS 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+K E GGLSG+PL ST +++++ + LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 256 PHKGEAGGLSGKPLFELSTTVLAKVRRRVGVNLPIIGVGGVSSPETALEKVRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L + I L +L+ +EG S+
Sbjct: 316 YSCMVYEGPGLPSAIVKGLSKLVAREGVESI 346
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E R A P+
Sbjct: 153 YVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLSAVLERRRAEAERFGRRIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVS--------SPNTANLRKL 154
+KIAPDL+ + D+A+ L D+ V N + SP+ L
Sbjct: 213 FLKIAPDLTEEGLDDVAEEALAH--------DLDGLIVSNTTLSRDGLRASPHKGEAGGL 264
Query: 155 QAKDQLKHLLKTVVETRNQLAVKPLPPILVK--IAPDLSLDEKKDIADVVLDSKCKV 209
K + + + R ++ V LP I V +P+ +L++ + AD+V C V
Sbjct: 265 SGKPLFELSTTVLAKVRRRVGVN-LPIIGVGGVSSPETALEKVRAGADLVQLYSCMV 320
>gi|417858829|ref|ZP_12503886.1| dihydroorotate dehydrogenase 2 [Agrobacterium tumefaciens F2]
gi|338824833|gb|EGP58800.1| dihydroorotate dehydrogenase 2 [Agrobacterium tumefaciens F2]
Length = 364
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 131/211 (62%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V+GI F VA YF VN+SSPNT LR LQA++ L LL V+E
Sbjct: 139 VNIGANKDSEDRIADYVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLAAVLE 198
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN A + PI +KIAPDL+ + D+A+ L +DGLIVSNTT+ R
Sbjct: 199 RRNVEAERFGKRIPIFLKIAPDLTEEGLDDVAEEAL--AHDLDGLIVSNTTLSREGLRPG 256
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+K E GGLSG+PL ST ++++M + G LPIIGVGGV S + A EK++AGA LVQ+
Sbjct: 257 PHKGEAGGLSGKPLFELSTTVLAKMRRRLGGNLPIIGVGGVSSPETALEKVRAGADLVQL 316
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L + I L +L+ +EG S+
Sbjct: 317 YSCMVYEGPGLPSSIVKGLSKLVAREGVESI 347
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ GI F VA YF VN+SSPNT LR LQA++ L LL V+E RN A PI
Sbjct: 154 YVQGIEAFYSVASYFTVNISSPNTPGLRDLQARESLAALLAAVLERRNVEAERFGKRIPI 213
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + D+A+ L
Sbjct: 214 FLKIAPDLTEEGLDDVAEEAL 234
>gi|319408116|emb|CBI81769.1| Dihydroorotate dehydrogenase [Bartonella schoenbuchensis R1]
Length = 368
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D + GI F DVA YF +NVSSPNT LR LQA+ L L+K V +
Sbjct: 141 INIGANKDTVNKIDDYIAGITCFYDVADYFTINVSSPNTPGLRDLQARSNLNLLMKAVSQ 200
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDL+ E DIA+ + S DGLIVSNTT+ R ++
Sbjct: 201 ARNEKKEKHGVSVPIFLKIAPDLTEQELDDIAEEMKLSD--FDGLIVSNTTLSRQGLKNS 258
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST ++++M K + IIGVGGV + + A EKIKAGA LVQ+
Sbjct: 259 TLISEEGGLSGRPLFEHSTVVLAKMRKRLGKDIAIIGVGGVRNAQTALEKIKAGADLVQL 318
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I ++ +++Q++G +++
Sbjct: 319 YSGMVYEGPELAVTIMRDVLQIMQQDGVDTI 349
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F DVA YF +NVSSPNT LR LQA+ L L+K V + RN+ K PI
Sbjct: 156 YIAGITCFYDVADYFTINVSSPNTPGLRDLQARSNLNLLMKAVSQARNEKKEKHGVSVPI 215
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDL+ E DIA+
Sbjct: 216 FLKIAPDLTEQELDDIAE 233
>gi|227820764|ref|YP_002824734.1| dihydroorotate dehydrogenase 2 [Sinorhizobium fredii NGR234]
gi|254788897|sp|C3MFT0.1|PYRD_RHISN RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|227339763|gb|ACP23981.1| dihydroorotate dehydrogenase [Sinorhizobium fredii NGR234]
Length = 362
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSADRIADYVAGIRTFYAVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A K P+ +KIAPDL+ + DIA VL +DGLIVSNTT+ R D
Sbjct: 198 ARDEEAAKTGRRVPVFLKIAPDLTEEGMDDIAAEVLAHN--LDGLIVSNTTLARDGLRDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K +PIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGRPLFEKSTAVLARMRKRLGPDVPIIGVGGVSSAETAAEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L RI L +L ++ S+ +
Sbjct: 316 YSCMVYEGPGLPGRIVRGLSQLCDRDKLASIRE 348
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R++ A K P+
Sbjct: 153 YVAGIRTFYAVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEEAAKTGRRVPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA VL
Sbjct: 213 FLKIAPDLTEEGMDDIAAEVL 233
>gi|451941580|ref|YP_007462217.1| dihydroorotate oxidase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451900967|gb|AGF75429.1| dihydroorotate oxidase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 362
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D GI F DV+ YF +N+SSPNT LR LQA+D L L+ + +
Sbjct: 136 INIGANKDTVDKINDYTAGIAYFYDVSDYFTINISSPNTPGLRALQARDSLHLLMNAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS E DIA+ + S DGLI+SNTT+ R ++
Sbjct: 196 ARNEQKKKHGFSVPIFLKIAPDLSEKELDDIAEEMKFSD--FDGLIISNTTLSRQGLNNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + ++ IIGVGGV + A EK+KAGA L+Q+
Sbjct: 254 FFSGEEGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVKDTQTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ + +Q++G S+
Sbjct: 314 YSGMVYEGPDLAVTILKEILQCMQQDGVESI 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F DV+ YF +N+SSPNT LR LQA+D L L+ + + RN+ K PI
Sbjct: 151 YTAGIAYFYDVSDYFTINISSPNTPGLRALQARDSLHLLMNAISQARNEQKKKHGFSVPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDLS E DIA+
Sbjct: 211 FLKIAPDLSEKELDDIAE 228
>gi|427730709|ref|YP_007076946.1| dihydroorotate oxidase A [Nostoc sp. PCC 7524]
gi|427366628|gb|AFY49349.1| dihydroorotate oxidase A [Nostoc sp. PCC 7524]
Length = 382
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 148/247 (59%), Gaps = 20/247 (8%)
Query: 90 TRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTA 149
++ +L L P PI + + + + A+ L+S + + GD YFVVNVSSPNT
Sbjct: 143 SQEKLELTPSIPIGINLGKS-KVTPLEAAAEDYLNSFRLLKNLGD---YFVVNVSSPNTP 198
Query: 150 NLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCK 208
LR LQ L +L + + N P P+ VKIAPDL E + IAD++ L +
Sbjct: 199 GLRSLQDATMLSSILDLLQKENN-----PYKPLFVKIAPDL---EWEAIADIINLAKTYQ 250
Query: 209 VDGLIVSNTTVDR----YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKLTKGKLP 261
+ G+I +NTT+ R + +D K +E GG+SG P+R++STE+I +++ T+G++P
Sbjct: 251 LAGIIATNTTISREGLKTQVIDKTGKSPEQEAGGISGVPVRDRSTEVIRFIWQQTQGQIP 310
Query: 262 IIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQA 321
IIGVGG+FS DA+ KI AGASL+Q+YT ++Y GP +V RI L L++ +S+S+A
Sbjct: 311 IIGVGGIFSPDDAWAKITAGASLIQVYTGWIYEGPMMVRRILQGLLAKLEQNSLSSISEA 370
Query: 322 VGAAHKS 328
VG KS
Sbjct: 371 VGFEFKS 377
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ L +L + + N P P+ VKIAPDL
Sbjct: 183 NLGDYFVVNVSSPNTPGLRSLQDATMLSSILDLLQKENN-----PYKPLFVKIAPDL--- 234
Query: 114 EKKDIADVV 122
E + IAD++
Sbjct: 235 EWEAIADII 243
>gi|241949675|ref|XP_002417560.1| dhodase, putative; dhodehase, putative; dihydroorotate
dehydrogenase, mitochondrial precursor, putative;
dihydroorotate oxidase, putative [Candida dubliniensis
CD36]
gi|223640898|emb|CAX45215.1| dhodase, putative [Candida dubliniensis CD36]
Length = 444
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 136/221 (61%), Gaps = 11/221 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D VKG+ + G A V+NVSSPNT LR LQ + +L +LL TVV+ R+ L
Sbjct: 227 KNKFGDEINDYVKGVERLGPYADVLVINVSSPNTPGLRDLQNEAKLTNLLTTVVKERDVL 286
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT----VDRYEYLDA 227
L PPILVK+APDL+ E + IA+ + KVDG+I+SNTT VDR D
Sbjct: 287 GKNLLGNKPPILVKVAPDLTEPEIESIANSA--KEAKVDGIIISNTTIQRPVDRLLTTDK 344
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ + GGLSG+PL+ S + + + K TK L +IG GG+ +GKDA E KAGA+ ++
Sbjct: 345 QLINQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFIE 404
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+YT+F Y GP LV +I+ EL E L+KEG + Q +G+ K
Sbjct: 405 LYTAFAYKGPGLVGKIRDELAEELRKEG-KTWEQIIGSDDK 444
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---LKPLPP 101
++ G+ + G A V+NVSSPNT LR LQ + +L +LL TVV+ R+ L L PP
Sbjct: 237 YVKGVERLGPYADVLVINVSSPNTPGLRDLQNEAKLTNLLTTVVKERDVLGKNLLGNKPP 296
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
ILVK+APDL+ E + IA+ ++ V GI+ +N + D+L
Sbjct: 297 ILVKVAPDLTEPEIESIANSAKEAKVDGII-----------------ISNTTIQRPVDRL 339
Query: 161 KHLLKTVVETRNQLAVKPLPPILVK 185
K ++ L+ KPL P+ +K
Sbjct: 340 LTTDKQLINQAGGLSGKPLKPLSLK 364
>gi|86356193|ref|YP_468085.1| dihydroorotate dehydrogenase 2 [Rhizobium etli CFN 42]
gi|123513123|sp|Q2KCS8.1|PYRD_RHIEC RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|86280295|gb|ABC89358.1| dihydroorotate dehydrogenase protein [Rhizobium etli CFN 42]
Length = 362
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A K P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 VRDEMAEKSGRKIPVFLKIAPDLTEEGMDDIAAEAL--AHPLDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I L LL +E S+
Sbjct: 316 YSCMVYEGPGLPGTIVRGLSALLDREKAGSI 346
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R+++A K P+
Sbjct: 153 YVAGIRRFHSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAVRDEMAEKSGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|395791379|ref|ZP_10470837.1| dihydroorotate dehydrogenase [Bartonella alsatica IBS 382]
gi|395408742|gb|EJF75352.1| dihydroorotate dehydrogenase [Bartonella alsatica IBS 382]
Length = 362
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + V D GI F DVA YF VN+SSPNT LR LQ +D L L+ + +
Sbjct: 136 INIGANKDTINKVNDYTSGIAYFYDVADYFTVNISSPNTPGLRDLQVRDSLHLLINAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS +E DIA+ V S DGLIVSNTT+ R ++
Sbjct: 196 MRNEQKKKYGFSVPIFLKIAPDLSEEELDDIAEEVKISD--FDGLIVSNTTLSRQGLNNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST ++++M + ++ IIGVGGV + A EK+KAGA L+Q+
Sbjct: 254 SLNSEEGGLSGRPLFECSTIVLAKMRQKLGKEIAIIGVGGVKDAQTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ +Y GP L I E+ ++++++G NS+
Sbjct: 314 YSGMIYEGPDLAVTILEEILQIMEQDGINSI 344
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVK 105
GI F DVA YF VN+SSPNT LR LQ +D L L+ + + RN+ K PI +K
Sbjct: 154 GIAYFYDVADYFTVNISSPNTPGLRDLQVRDSLHLLINAISQMRNEQKKKYGFSVPIFLK 213
Query: 106 IAPDLSLDEKKDIADVV 122
IAPDLS +E DIA+ V
Sbjct: 214 IAPDLSEEELDDIAEEV 230
>gi|409401973|ref|ZP_11251603.1| dihydroorotate dehydrogenase 2 [Acidocella sp. MX-AZ02]
gi|409129408|gb|EKM99265.1| dihydroorotate dehydrogenase 2 [Acidocella sp. MX-AZ02]
Length = 335
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 11/211 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
KD AD D + A Y +N+SSPNT LR LQ++++L +L + +
Sbjct: 135 NKDGADPERDYPALVKAVAPHADYITINISSPNTPGLRDLQSEERLAGILAGIDSPK--- 191
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG 234
P+ VKIAPDLS + + + +V + + KV GLI++NTT+ R + L + + E G
Sbjct: 192 ------PVYVKIAPDLSEEGLEAVIEVAI--QHKVSGLIIANTTIARPDTLKSPLRREAG 243
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL N ST +++ Y+L +L IG GGVF+ +DA K+ AGASLVQIYT F Y
Sbjct: 244 GLSGAPLFNASTAMLARAYRLAGRQLTFIGAGGVFTAEDALAKLLAGASLVQIYTGFAYQ 303
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
GP ++ ++K L LL+ G+++VS AVGA
Sbjct: 304 GPAMLPKLKHRLAALLKDRGFSTVSDAVGAG 334
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +N+SSPNT LR LQ++++L +L + + P+ VKIAPDLS +
Sbjct: 156 ADYITINISSPNTPGLRDLQSEERLAGILAGIDSPK---------PVYVKIAPDLSEEGL 206
Query: 116 KDIADVVL 123
+ + +V +
Sbjct: 207 EAVIEVAI 214
>gi|88657936|ref|YP_507729.1| dihydroorotate dehydrogenase 2 [Ehrlichia chaffeensis str.
Arkansas]
gi|88599393|gb|ABD44862.1| dihydroorotate dehydrogenase [Ehrlichia chaffeensis str. Arkansas]
Length = 350
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 137/217 (63%), Gaps = 3/217 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K +D + D + K +++Y +N+SSPNT L + Q KD L LL + +
Sbjct: 137 INIGFNKKSSDPIQDYFDSVKKVYGLSNYITINISSPNTPGLDEFQKKDLLSELLTAISQ 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R PI++KI+PD++ ++K+DI D+ + K K+ GLI+SNT+ + L+
Sbjct: 197 VRKLADYAESVPIMLKISPDINDNKKQDIVDLAI--KYKISGLIISNTSSQHNKLLNMNT 254
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
GGLSG+PL + ST+++SE+Y+ ++GKL +IG GGV +G A+EKIKAGASLVQ+YT
Sbjct: 255 NIH-GGLSGKPLFDLSTQVLSEIYQASQGKLLLIGCGGVSTGYHAYEKIKAGASLVQLYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ VY+G + +I EL +LL +G+ +V A+G H
Sbjct: 314 AIVYNGFNIANKISLELADLLAADGFPTVRHAIGHNH 350
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 34 FARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ 93
F + + +Q + + K +++Y +N+SSPNT L + Q KD L LL + + R
Sbjct: 141 FNKKSSDPIQDYFDSVKKVYGLSNYITINISSPNTPGLDEFQKKDLLSELLTAISQVRKL 200
Query: 94 LALKPLPPILVKIAPDLSLDEKKDIADVVL 123
PI++KI+PD++ ++K+DI D+ +
Sbjct: 201 ADYAESVPIMLKISPDINDNKKQDIVDLAI 230
>gi|213963747|ref|ZP_03391997.1| dihydroorotate oxidase [Capnocytophaga sputigena Capno]
gi|213953627|gb|EEB64959.1| dihydroorotate oxidase [Capnocytophaga sputigena Capno]
Length = 342
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 122/173 (70%), Gaps = 5/173 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ LK LL T+ + LA + PIL+KIAPDL+ +
Sbjct: 168 DYVDYFVVNVSSPNTPNLRSLQEKEPLKQLLNTLQDK--NLAKENSKPILLKIAPDLTDE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI ++V + + G+I +NTT++R + L + K+ETGGLSG+PL+N++TE+I +
Sbjct: 226 QLLDIIEIV--KETNIAGVIATNTTINR-DGLLSNNKKETGGLSGKPLKNRATEVIRFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + PIIGVGG+FS +DA EK++AGASLVQ+YT F+Y G L+ RI +L
Sbjct: 283 EKSGKAFPIIGVGGIFSEEDAIEKLEAGASLVQLYTGFIYEGAGLIKRINKKL 335
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + D YFVVNVSSPNT NLR LQ K+ LK LL T+ + LA + PIL+
Sbjct: 159 YLICFEQLFDYVDYFVVNVSSPNTPNLRSLQEKEPLKQLLNTLQDK--NLAKENSKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
KIAPDL+ ++ DI ++V ++
Sbjct: 217 KIAPDLTDEQLLDIIEIVKET 237
>gi|255728327|ref|XP_002549089.1| dihydroorotate dehydrogenase, mitochondrial precursor [Candida
tropicalis MYA-3404]
gi|240133405|gb|EER32961.1| dihydroorotate dehydrogenase, mitochondrial precursor [Candida
tropicalis MYA-3404]
Length = 441
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 132/208 (63%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A V+NVSSPNT LR LQ++ +L +LL TVV+ R+ L
Sbjct: 224 KNKFGDEVSDFVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLSTVVKERDIL 283
Query: 175 AVKPL---PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT----VDRYEYLDA 227
L PP+LVK+APDL+ E + IA+ + KVDG+I+SNTT VD+ D
Sbjct: 284 GKNLLGEKPPVLVKVAPDLTEPEIESIANSA--KEAKVDGIIISNTTIQRPVDKLLTTDQ 341
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ ETGGLSG+PL+ + + + + K TK L +IG GG+ +GKDA E KAGA+ ++
Sbjct: 342 KLINETGGLSGKPLKPFALKALRTLRKYTKDSNLVLIGCGGISTGKDALEFGKAGATFIE 401
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP LV +I+ EL + L++EG
Sbjct: 402 LYTAFAYKGPGLVAKIRDELAQELRQEG 429
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---LKPLPP 101
++ G+ + G A V+NVSSPNT LR LQ++ +L +LL TVV+ R+ L L PP
Sbjct: 234 FVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLSTVVKERDILGKNLLGEKPP 293
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+LVK+APDL+ E + IA+ ++ V GI+
Sbjct: 294 VLVKVAPDLTEPEIESIANSAKEAKVDGII 323
>gi|332705709|ref|ZP_08425785.1| dihydroorotate oxidase A [Moorea producens 3L]
gi|332355501|gb|EGJ34965.1| dihydroorotate oxidase A [Moorea producens 3L]
Length = 447
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 136/206 (66%), Gaps = 18/206 (8%)
Query: 128 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIA 187
G+L+ ++ YFVVNVSSPNT LR LQ QL +L + + ++ K PILVKIA
Sbjct: 250 GLLR--ELGDYFVVNVSSPNTPGLRSLQDATQLSLILDAL--QQENVSQK---PILVKIA 302
Query: 188 PDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR----YEYLDARYK---EETGGLSGE 239
PDL E IADV+ L + G+I +NTT+ R + + A K EE GG+SG
Sbjct: 303 PDL---EWNAIADVLELAQTYGLAGIIATNTTIRRDLLKTQRIAATGKPVTEEAGGISGA 359
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
PLR +ST++I +++ T+G LPIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y+GP +V
Sbjct: 360 PLRQRSTDVIRFIWQETQGTLPIIGVGGIFTAEDAWEKITAGASLIQVYTGWIYNGPWMV 419
Query: 300 TRIKSELEELLQKEGYNSVSQAVGAA 325
+I L + L++ G +S+S+AVG+
Sbjct: 420 RQILQGLLQKLEERGMSSISEAVGSG 445
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKI 106
G+L+ ++ YFVVNVSSPNT LR LQ QL +L + + ++ K PILVKI
Sbjct: 249 FGLLR--ELGDYFVVNVSSPNTPGLRSLQDATQLSLILDAL--QQENVSQK---PILVKI 301
Query: 107 APDLSLDEKKDIADVVLDSVKGILKFGDVAH-YFVVNVSSPNTANLRKLQAKDQLKHLLK 165
APDL E IADV+ ++A Y + + + NT R L ++ K
Sbjct: 302 APDL---EWNAIADVL-----------ELAQTYGLAGIIATNTTIRRDLLKTQRIAATGK 347
Query: 166 TVVETRNQLAVKPL 179
V E ++ PL
Sbjct: 348 PVTEEAGGISGAPL 361
>gi|323137924|ref|ZP_08072999.1| dihydroorotate dehydrogenase [Methylocystis sp. ATCC 49242]
gi|322396927|gb|EFX99453.1| dihydroorotate dehydrogenase [Methylocystis sp. ATCC 49242]
Length = 381
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 116/176 (65%), Gaps = 4/176 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YF +NVSSPNT LR LQ L LL V++ R+ L + P+L+KIAPDL+LD+
Sbjct: 186 YFTINVSSPNTPGLRDLQEPAALADLLARVIDARDALPTRR--PVLLKIAPDLALDQLDG 243
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I V D VDG+IVSNTT+ R + L + +ETGGLSG+PL ST ++++ +
Sbjct: 244 IVRVARDRG--VDGMIVSNTTISRPDTLRSPLSKETGGLSGKPLFLLSTRMLAQTCLRVE 301
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
G+ P+IG GGV S + A KI+AGA+LVQ+Y++ VY GP LVTRIK L E LQ+E
Sbjct: 302 GQFPLIGAGGVDSAEAALAKIEAGATLVQLYSALVYEGPGLVTRIKRGLVEALQRE 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YF +NVSSPNT LR LQ L LL V++ R+ L + P+L+KIAPDL+LD+
Sbjct: 186 YFTINVSSPNTPGLRDLQEPAALADLLARVIDARDALPTR--RPVLLKIAPDLALDQLDG 243
Query: 118 IADVVLD-SVKGIL 130
I V D V G++
Sbjct: 244 IVRVARDRGVDGMI 257
>gi|166364338|ref|YP_001656611.1| dihydroorotate dehydrogenase 2 [Microcystis aeruginosa NIES-843]
gi|166086711|dbj|BAG01419.1| dihydroorotate dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 382
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
+ I D+ ++ G++ +NTT R EE GG+SG+PL ++TE+
Sbjct: 244 RTIIDLAFS--YELAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGKPLGERATEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEANGLTNINQAVG 376
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
+ I D+ Y + + + NT R L K + E ++
Sbjct: 244 RTIIDLAF-------------SYELAGIVATNTTTKRTGLKTTILPETGKPITEEAGGIS 290
Query: 176 VKPL 179
KPL
Sbjct: 291 GKPL 294
>gi|89890499|ref|ZP_01202009.1| dihydroorotate dehydrogenase [Flavobacteria bacterium BBFL7]
gi|89517414|gb|EAS20071.1| dihydroorotate dehydrogenase [Flavobacteria bacterium BBFL7]
Length = 354
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 7/189 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V D + K + YF VNVSSPNT LR+LQ + L H+L+T+ + N+ A +
Sbjct: 166 DAVNDYIICFEKLFEHVDYFTVNVSSPNTPGLRELQDRKPLTHILQTLQDLNNKKAQRK- 224
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK--EETGGLS 237
PIL+KIAPDL+ D+ DI +V D+K +DG+I SNTT+ R E L ++ + GGLS
Sbjct: 225 -PILLKIAPDLTDDQLMDIIGIVEDTK--IDGIISSNTTISR-EGLQSKESLINQAGGLS 280
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PL N++TE+IS +++ + G PIIGVGG+ + +DA +K+ AGASLVQ+YT FVY GP
Sbjct: 281 GAPLTNRATEVISFLHQKSNGAFPIIGVGGIMTAQDAIDKMNAGASLVQLYTGFVYEGPA 340
Query: 298 LVTRIKSEL 306
L+ I +
Sbjct: 341 LIRDINKAI 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 16/117 (13%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++ K + YF VNVSSPNT LR+LQ + L H+L+T+ + N+ A + PIL+
Sbjct: 171 YIICFEKLFEHVDYFTVNVSSPNTPGLRELQDRKPLTHILQTLQDLNNKKAQR--KPILL 228
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
KIAPDL+ D+ DI +V D+ + GI +SS T + LQ+K+ L
Sbjct: 229 KIAPDLTDDQLMDIIGIVEDTKIDGI-------------ISSNTTISREGLQSKESL 272
>gi|399022382|ref|ZP_10724459.1| dihydroorotate dehydrogenase, subfamily 2 [Chryseobacterium sp.
CF314]
gi|398084991|gb|EJL75660.1| dihydroorotate dehydrogenase, subfamily 2 [Chryseobacterium sp.
CF314]
Length = 340
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 115/169 (68%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR+LQ K+ L +LL T+ + N P PIL+KIAPDLS D+ D
Sbjct: 168 YFVVNVSSPNTPNLRELQDKEPLTYLLGTL-QQMNIEKANP-KPILLKIAPDLSDDQLLD 225
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I D+V + K+ G+I +NTT+ R E L + K E GGLSG+PL +STE+I + + +
Sbjct: 226 IIDIV--KETKIAGVIATNTTLSR-EGLSSENKSEMGGLSGKPLTKRSTEVIRFLSEKSN 282
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ S KDA EK+ AGASLVQ+YT F+Y GP L+ I EL
Sbjct: 283 RAFPIIGVGGIHSAKDAIEKLDAGASLVQLYTGFIYEGPQLINEINQEL 331
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR+LQ K+ L +LL T+ + + A P PIL+KIAPDLS D+ D
Sbjct: 168 YFVVNVSSPNTPNLRELQDKEPLTYLLGTLQQMNIEKA-NP-KPILLKIAPDLSDDQLLD 225
Query: 118 IADVVLDS-VKGIL 130
I D+V ++ + G++
Sbjct: 226 IIDIVKETKIAGVI 239
>gi|336366679|gb|EGN95025.1| hypothetical protein SERLA73DRAFT_113756 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379364|gb|EGO20519.1| hypothetical protein SERLADRAFT_363420 [Serpula lacrymans var.
lacrymans S7.9]
Length = 498
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 124/215 (57%), Gaps = 9/215 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K A+ V D V G+ FG + VVNVSSPNT LR LQ +D L+ LL + R++L
Sbjct: 224 KTSAAESVDDFVTGVKTFGSYSDVLVVNVSSPNTPGLRGLQNRDLLESLLSEAAKARDEL 283
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
PL P +++K+APDL + DIADV+ SK +DG+IVSNTT+ R L K
Sbjct: 284 PPSPLTLRRPKLVLKLAPDLEESQIIDIADVIRHSK--IDGVIVSNTTIQRPSSLTDPNK 341
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
ETGGLSG PL+ S + + +P+IG GG+ SG DA E +AGASLVQ+YT
Sbjct: 342 LETGGLSGVPLKPHSLRALRTLRTHLPASVPLIGCGGISSGADALEFAQAGASLVQVYTG 401
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYN---SVSQAV 322
F Y G RIK EL L+ EG V+QAV
Sbjct: 402 FGYDGAGACRRIKDELSRALEAEGKTWGEVVNQAV 436
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----P 100
++ G+ FG + VVNVSSPNT LR LQ +D L+ LL + R++L PL P
Sbjct: 234 FVTGVKTFGSYSDVLVVNVSSPNTPGLRGLQNRDLLESLLSEAAKARDELPPSPLTLRRP 293
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+++K+APDL + DIADV+ S + G++
Sbjct: 294 KLVLKLAPDLEESQIIDIADVIRHSKIDGVI 324
>gi|86143076|ref|ZP_01061498.1| dihydroorotate dehydrogenase [Leeuwenhoekiella blandensis MED217]
gi|85830521|gb|EAQ48980.1| dihydroorotate dehydrogenase [Leeuwenhoekiella blandensis MED217]
Length = 337
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 118/173 (68%), Gaps = 6/173 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ L LL + E N+L K PIL+KIAPDL+ +
Sbjct: 167 DYVDYFVVNVSSPNTPNLRALQDKEPLTKLLAGLQEL-NKL--KGGKPILLKIAPDLTDE 223
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI D+V ++ G+I +NTT+ R E L + KEETGGLSG+PL+++STE+I +
Sbjct: 224 QLLDIIDIV--KTTQIAGVIATNTTISR-EGLKSENKEETGGLSGKPLKDRSTEVIRFLS 280
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ PIIGVGG+ S DA EK++AGASL+Q+YT F+Y GP L+ RI E+
Sbjct: 281 VKSNKAFPIIGVGGIHSAADALEKLEAGASLIQLYTGFIYEGPELIKRINQEI 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K+ L LL + E LK PIL+KIAPDL+ +
Sbjct: 167 DYVDYFVVNVSSPNTPNLRALQDKEPLTKLLAGLQELNK---LKGGKPILLKIAPDLTDE 223
Query: 114 EKKDIADVV 122
+ DI D+V
Sbjct: 224 QLLDIIDIV 232
>gi|319411567|emb|CBQ73611.1| related to dihydroorotate dehydrogenase, mitochondrial precursor
[Sporisorium reilianum SRZ2]
Length = 687
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 173/313 (55%), Gaps = 34/313 (10%)
Query: 28 HNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTA--NLRKLQAKDQLKHLLK 85
HN++ S R R ++ WLL VA V+SP++A + R+L A K
Sbjct: 220 HNVILSRLRDR---IRRWLL---HSSSVASLQDALVASPDSATQDARQLIAT-HPKSTSA 272
Query: 86 TVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSS 145
V T +L+P + + + + + E+ V D VKG+ + G A +VNVSS
Sbjct: 273 FVDATDLPRSLRPAKLLGINLGKNKTSKEES-----VDDYVKGVERLGPYADMIIVNVSS 327
Query: 146 PNTANLRKLQAKDQLKHLLKTVVETR------------NQLAVKPLPPILVKIAPDLSLD 193
PNT LR+LQ + L+ LL VV+ R N++AV P+LVKIAPDLS +
Sbjct: 328 PNTPGLRRLQRRGVLEDLLTQVVKARDGMVESHLRFSDNKVAV----PLLVKIAPDLSEE 383
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETGGLSGEPLRNKSTELISEM 252
E D+AD L K +DGL++SNTT+ R L + + ETGGLSG P++ + + ++ +
Sbjct: 384 ELHDVADAAL--KSGIDGLVISNTTISRPASLRSSEHVRETGGLSGPPVKPLALKALTTV 441
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
K +GKLPIIG GG+ + +DA + KAGAS V++YTSF Y G L R+K EL LL+
Sbjct: 442 NKRLEGKLPIIGCGGIATAQDALDFAKAGASAVELYTSFGYQGVGLPRRLKDELVALLKA 501
Query: 313 EGYNSVSQAVGAA 325
EG + Q VG+
Sbjct: 502 EG-KTWKQVVGSG 513
>gi|296282948|ref|ZP_06860946.1| dihydroorotate dehydrogenase 2 [Citromicrobium bathyomarinum JL354]
Length = 344
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D +A Y +N+SSPNT LR LQ D LKHLL V E
Sbjct: 135 INIGANKDSDDRIADYALMTELMAPLASYLTINISSPNTPGLRDLQTGDALKHLLDGVFE 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + A P+ +K+APDL E IA V LDS LI+SNTT+ R + L + +
Sbjct: 195 ARGERAT----PVFLKLAPDLEPSEIDAIAKVALDSPLAA--LIISNTTLARPD-LKSSH 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG PL + + + + K T G++P+I GG+ S A+E+I AGASLVQ+Y+
Sbjct: 248 ADEAGGLSGAPLAPLALQRLKDFRKATGGQIPLIAAGGIDSADAAWERIVAGASLVQLYS 307
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VYHGP L RI L + L+ EG+ S+ A+G+
Sbjct: 308 AMVYHGPMLGRRIAKGLSQRLRAEGFASIEDAIGS 342
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G E+ R+ R R G G N S R+ + L L+ L A Y +N
Sbjct: 114 GGAEAAHRRLRKRAGRPGIVGINIGANK-DSDDRIADYALMTELMAPL-----ASYLTIN 167
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ D LKHLL V E R + A P+ +K+APDL E IA V
Sbjct: 168 ISSPNTPGLRDLQTGDALKHLLDGVFEARGERAT----PVFLKLAPDLEPSEIDAIAKVA 223
Query: 123 LDS 125
LDS
Sbjct: 224 LDS 226
>gi|254460503|ref|ZP_05073919.1| dihydroorotate oxidase [Rhodobacterales bacterium HTCC2083]
gi|206677092|gb|EDZ41579.1| dihydroorotate oxidase [Rhodobacteraceae bacterium HTCC2083]
Length = 353
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D K ++ G + VNVSSPNT LR LQ L LL V++
Sbjct: 138 LNLGANKDSDDRAADFAKVLVHCGAHVDFATVNVSSPNTEKLRDLQGAAALSALLSGVMD 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R LA P+P + +KIAPDL+ E +IA V L + V G+I +NTT+DR + L +++
Sbjct: 198 ARATLAT-PIP-VFLKIAPDLTDGEIAEIAQVALSTG--VQGVITTNTTLDR-DGLQSQH 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PL KST +++++ T G++P+IGVGGV + + A+ KI AGAS VQ+YT
Sbjct: 253 KGEMGGLSGAPLFEKSTRILAKLSAQTDGRIPLIGVGGVSTPEQAYAKICAGASAVQLYT 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G L I L+ LLQ +G+ +V+ AVG+
Sbjct: 313 ALVYGGLGLAADIVHGLDNLLQADGHANVADAVGS 347
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ L LL V++ R LA P+ P+ +KIAPDL+ E +
Sbjct: 166 FATVNVSSPNTEKLRDLQGAAALSALLSGVMDARATLA-TPI-PVFLKIAPDLTDGEIAE 223
Query: 118 IADVVLDS-VKGIL 130
IA V L + V+G++
Sbjct: 224 IAQVALSTGVQGVI 237
>gi|429755292|ref|ZP_19287957.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429175179|gb|EKY16631.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 348
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILLKIAPDLTDEQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V ++ + G+I +NTT+ R E L + ++ETGGLSG+PL+N+STE+I + + +
Sbjct: 230 IIEIVQETH--IAGVIATNTTIGR-EGLVSDNQKETGGLSGKPLKNRSTEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+FS DA EK++AGASL+Q+YT F+Y G L+ RI +L
Sbjct: 287 HAFPIIGVGGIFSETDALEKLEAGASLIQLYTGFIYEGADLIKRINKQL 335
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + + YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+
Sbjct: 159 YLICFEQLFNYVDYFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ ++ DI ++V ++ + G++
Sbjct: 217 KIAPDLTDEQLLDIIEIVQETHIAGVI 243
>gi|315224192|ref|ZP_07866032.1| dihydroorotate oxidase [Capnocytophaga ochracea F0287]
gi|420158383|ref|ZP_14665201.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga ochracea
str. Holt 25]
gi|314945925|gb|EFS97934.1| dihydroorotate oxidase [Capnocytophaga ochracea F0287]
gi|394763732|gb|EJF45802.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga ochracea
str. Holt 25]
Length = 348
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILLKIAPDLTDEQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V ++ + G+I +NTT+ R E L + ++ETGGLSG+PL+N+STE+I + + +
Sbjct: 230 IIEIVQETH--IAGVIATNTTIGR-EGLVSDNQKETGGLSGKPLKNRSTEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+FS DA EK++AGASL+Q+YT F+Y G L+ RI +L
Sbjct: 287 HAFPIIGVGGIFSETDALEKLEAGASLIQLYTGFIYEGAGLIKRINKQL 335
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + + YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+
Sbjct: 159 YLICFEQLFNYVDYFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ ++ DI ++V ++ + G++
Sbjct: 217 KIAPDLTDEQLLDIIEIVQETHIAGVI 243
>gi|156837633|ref|XP_001642837.1| hypothetical protein Kpol_387p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113411|gb|EDO14979.1| hypothetical protein Kpol_387p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 440
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 14/212 (6%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D +KG+ KF +A V+NVSSPNT LR LQ + +L +LL VV R+ L
Sbjct: 219 KNKTGDEVQDYIKGVEKFQSLADVLVINVSSPNTPGLRDLQEESKLTNLLTQVVAKRDSL 278
Query: 175 AVKP--------LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ PPILVKIAPDL+ E + I + SK +DG+IVSNTT+ R + L
Sbjct: 279 VNRGDALGEKTHRPPILVKIAPDLTEPEFQSIVESAKASK--IDGIIVSNTTIQRPDSLK 336
Query: 227 ARYK---EETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGA 282
+ K +TGGLSG PL+ + + + K +K L ++G GG+++GKDA E KAGA
Sbjct: 337 TKDKTLVNQTGGLSGRPLKPFALRALKTVAKYSKDSDLVLVGCGGIYTGKDAIEFAKAGA 396
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
+ VQIYTS+ Y GP +V RIK E+ + L+KEG
Sbjct: 397 TFVQIYTSYGYSGPTIVARIKDEIADELKKEG 428
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--- 98
+Q ++ G+ KF +A V+NVSSPNT LR LQ + +L +LL VV R+ L +
Sbjct: 226 VQDYIKGVEKFQSLADVLVINVSSPNTPGLRDLQEESKLTNLLTQVVAKRDSLVNRGDAL 285
Query: 99 -----LPPILVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLR 152
PPILVKIAPDL+ E + I + S + GI+ V N +
Sbjct: 286 GEKTHRPPILVKIAPDLTEPEFQSIVESAKASKIDGII---------VSNTT-------- 328
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVK 185
+Q D LK KT+V L+ +PL P ++
Sbjct: 329 -IQRPDSLKTKDKTLVNQTGGLSGRPLKPFALR 360
>gi|315122118|ref|YP_004062607.1| dihydroorotate dehydrogenase 2 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495520|gb|ADR52119.1| dihydroorotate dehydrogenase 2 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 339
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 133/226 (58%), Gaps = 10/226 (4%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
PI V I + KD D ++D V GI +F +A YF +N+SSPNT LR LQ + L
Sbjct: 112 PIGVNIGAN------KDSKDFIMDYVYGIRQFFTIASYFTINISSPNTPGLRHLQKRQNL 165
Query: 161 KHLLKTVVETRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
+ LL V++TR + +K PI +KI+PDLS +E DIA + K V+GL+VSNTT
Sbjct: 166 EKLLTRVMQTREEEIIKTGKSVPIFLKISPDLSEEELDDIATEAISHK--VEGLVVSNTT 223
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ R D+ KE+ GGLSG PL KST ++++M + K+ IIG GGV S +DA EKI
Sbjct: 224 LSREGLQDSLNKEKIGGLSGSPLFLKSTIILAKMRQRVGSKMVIIGTGGVSSTEDALEKI 283
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
AGA+L+Q+Y++ VY G L I L KE S+ G+
Sbjct: 284 MAGANLIQLYSAMVYGGISLPKSIIKGFSHFLDKEKKKSLEDIRGS 329
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F +A YF +N+SSPNT LR LQ + L+ LL V++TR + +K PI
Sbjct: 130 YVYGIRQFFTIASYFTINISSPNTPGLRHLQKRQNLEKLLTRVMQTREEEIIKTGKSVPI 189
Query: 103 LVKIAPDLSLDEKKDIA-DVVLDSVKGIL 130
+KI+PDLS +E DIA + + V+G++
Sbjct: 190 FLKISPDLSEEELDDIATEAISHKVEGLV 218
>gi|260574819|ref|ZP_05842821.1| dihydroorotate dehydrogenase [Rhodobacter sp. SW2]
gi|259022824|gb|EEW26118.1| dihydroorotate dehydrogenase [Rhodobacter sp. SW2]
Length = 353
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 138/231 (59%), Gaps = 11/231 (4%)
Query: 100 PPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 159
PP V + L+L KD D D + G + VNVSSPNT LR LQ +
Sbjct: 130 PPGPVPVG--LNLGANKDSPDRAADFAAVLAACGPHVDFATVNVSSPNTEKLRDLQGRAA 187
Query: 160 LKHLLKTVVETRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNT 217
L LL V++TR +L A+ PI +KIAPDL D+ DIA+V L + + G+I +NT
Sbjct: 188 LTALLSGVMDTRARLPRAI----PIFLKIAPDLHDDDLADIAEVALATG--ISGIIATNT 241
Query: 218 TVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
T+ R E L + ++E GGLSG PL KST +++ + +LT G LP++GVGG+ + + A+ K
Sbjct: 242 TLSR-EGLKSADRDEKGGLSGAPLFEKSTRVLARLSQLTDGALPLVGVGGIGNAEQAYAK 300
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
I+AGA VQIYT+ VY G L+ +I L+ LL ++G+ ++S A+G S
Sbjct: 301 IRAGACAVQIYTAMVYEGLSLIPKIAQGLDALLARDGHATLSAAIGTDRAS 351
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V++TR +L PI +KIAPDL D+ D
Sbjct: 166 FATVNVSSPNTEKLRDLQGRAALTALLSGVMDTRARLPRA--IPIFLKIAPDLHDDDLAD 223
Query: 118 IADVVLDS-VKGIL 130
IA+V L + + GI+
Sbjct: 224 IAEVALATGISGII 237
>gi|448399608|ref|ZP_21570868.1| dihydroorotate dehydrogenase 2 [Haloterrigena limicola JCM 13563]
gi|445668625|gb|ELZ21252.1| dihydroorotate dehydrogenase 2 [Haloterrigena limicola JCM 13563]
Length = 356
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 150/284 (52%), Gaps = 19/284 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQA---KDQLKHLLKTVVETRNQLALKPLPPIL 103
G ++ G V Y P LR+ +A + VV++R + P P+
Sbjct: 85 FGFVEIGTVTPYAQTGNDRPRLFRLREDRAMVNRMGFNGQGMEVVKSRLEADGTPEIPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V I S E++ I D V D + A Y VVNVS PNT + D L+
Sbjct: 145 VNIGKMNSSSEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPEEFDEGSPDHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E N V P+LVKI PD D D+ D+V + +DG++ +NTT R
Sbjct: 199 AIFETL-EAENDADV----PLLVKIGPDSPTDSVFDLVDIV--QEFGLDGIVATNTTTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
+ A K+E GGLSG+PL +ST +I + + T G+LPIIGVGGV S A+ KI+AG
Sbjct: 252 DGLVSAN-KQEWGGLSGKPLERRSTAMIRSIAEYTDGELPIIGVGGVDSAASAYAKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
ASLVQ+YT FVY GP +I L ELL+++G++SV AVGA
Sbjct: 311 ASLVQLYTGFVYQGPSTAKQINQGLVELLERDGFSSVEDAVGAG 354
>gi|257059739|ref|YP_003137627.1| dihydroorotate dehydrogenase 2 [Cyanothece sp. PCC 8802]
gi|256589905|gb|ACV00792.1| dihydroorotate dehydrogenase [Cyanothece sp. PCC 8802]
Length = 377
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 151/266 (56%), Gaps = 19/266 (7%)
Query: 69 ANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKG 128
A L +L A +Q ++ + Q + + +P I +L + + + D V
Sbjct: 124 AVLNRLGANNQGAEIMAQTLAEIWQRSPRNIP-----IGINLCKSKITPLDEADQDYVGS 178
Query: 129 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAP 188
+ A YFVVNVSSPNT LR LQ +QL +L+ + Q A + P+ VKI+P
Sbjct: 179 FSYLENQADYFVVNVSSPNTPGLRSLQEGEQLNSILQAL-----QAANQHQKPLFVKISP 233
Query: 189 DLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA-------RYKEETGGLSGEPL 241
DL +E+ + + L + G+I +NTT+ R + +EE GG+SG P+
Sbjct: 234 DL--EEEAILTIIELAQTHCLAGIIATNTTIKRDRLTTQILPETGNKIQEEAGGISGLPI 291
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R++STE+I +Y+ T+GKLPIIGVGG+F+ DA+ KI AGASL+Q+YT ++Y GP ++
Sbjct: 292 RDRSTEIIGFIYQKTQGKLPIIGVGGIFTPDDAWNKITAGASLLQLYTGWIYQGPWIIPD 351
Query: 302 IKSELEELLQKEGYNSVSQAVGAAHK 327
I EL + L++ G + +SQAVG HK
Sbjct: 352 IVRELGDKLKQLGLSHISQAVGINHK 377
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
A YFVVNVSSPNT LR LQ +QL +L+ + Q A + P+ VKI+PDL
Sbjct: 186 ADYFVVNVSSPNTPGLRSLQEGEQLNSILQAL-----QAANQHQKPLFVKISPDL 235
>gi|422293648|gb|EKU20948.1| dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526]
gi|422295683|gb|EKU22982.1| dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526]
Length = 560
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 141/243 (58%), Gaps = 46/243 (18%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV---------------V 168
D V G+ + A Y VVNVSSPNT LR LQ K + L++ V
Sbjct: 287 DYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFAT 346
Query: 169 ETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R + P+L+K+APDL+ +EKKDIA V L++ +DGLIVSNTTV R L +R
Sbjct: 347 NVRGRRV-----PLLIKVAPDLTEEEKKDIAAVALETG--IDGLIVSNTTVTRPPILRSR 399
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ- 286
+ ETGGLSG PL+ +T+ + + Y+LT G+LPIIGVGG+ SG+DA++KI+AGASLVQ
Sbjct: 400 HAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQV 459
Query: 287 ----------------------IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+ VY GP V RI EL LL+++GY +S AVGA
Sbjct: 460 RKILDKGEGAAGNAREASVLRRVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGA 519
Query: 325 AHK 327
AH+
Sbjct: 520 AHR 522
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 20/96 (20%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP---- 100
++LG+ + A Y VVNVSSPNT LR LQ K + L++ V Q LK
Sbjct: 288 YVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAV-----QRELKGPSGHAR 342
Query: 101 -----------PILVKIAPDLSLDEKKDIADVVLDS 125
P+L+K+APDL+ +EKKDIA V L++
Sbjct: 343 GFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALET 378
>gi|390595648|gb|EIN05052.1| dihydroorotate dehydrogenase [Punctularia strigosozonata HHB-11173
SS5]
Length = 469
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 128/216 (59%), Gaps = 4/216 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ + V D V+G+ FG A V+NVSSPNT LR LQ + L LL VV+ RN L
Sbjct: 221 KESPLESVDDFVRGVQVFGPHADVLVINVSSPNTPGLRNLQKRSHLGDLLAGVVQARNDL 280
Query: 175 AVKPL--PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE 232
P +++K++PDL+ D+ ++IA+VV S VDG+IVSNTT+ R L K E
Sbjct: 281 QASSSRKPKLMLKLSPDLTADDVREIAEVVRSSG--VDGVIVSNTTISRPRGLTHPNKTE 338
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL++ S ++ + +PIIG GG+ SG DA + +AGAS+VQIYT F
Sbjct: 339 AGGLSGPPLKHLSLAVLRTLRSNLPESIPIIGCGGITSGADALDYARAGASMVQIYTHFG 398
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
Y G RIK EL ++L++EG GAA ++
Sbjct: 399 YDGVGACRRIKDELSDILRREGTTWKEVVSGAASEA 434
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ FG A V+NVSSPNT LR LQ + L LL VV+ RN Q + P +
Sbjct: 231 FVRGVQVFGPHADVLVINVSSPNTPGLRNLQKRSHLGDLLAGVVQARNDLQASSSRKPKL 290
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
++K++PDL+ D+ ++IA+VV S V G++ + ++ PN L LK
Sbjct: 291 MLKLSPDLTADDVREIAEVVRSSGVDGVI-VSNTTISRPRGLTHPNKTEAGGLSGP-PLK 348
Query: 162 HLLKTVVET 170
HL V+ T
Sbjct: 349 HLSLAVLRT 357
>gi|365854332|ref|ZP_09394415.1| dihydroorotate oxidase [Acetobacteraceae bacterium AT-5844]
gi|363720241|gb|EHM03522.1| dihydroorotate oxidase [Acetobacteraceae bacterium AT-5844]
Length = 352
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 136/227 (59%), Gaps = 9/227 (3%)
Query: 97 KPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQA 156
+PLP +L ++ KD AD D L A Y +NVSSPNT LR LQ
Sbjct: 132 RPLPAVL-----GANIGINKDGADPERDYPALYLGVAPHAAYVTINVSSPNTPGLRDLQG 186
Query: 157 KDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
+ +L +L V R +P P+LVKIAPDL+ D + + + + + V GLIVSN
Sbjct: 187 EAKLAAILAAVASARAGAPKQP--PVLVKIAPDLAPDAVEPLVETCIAND--VAGLIVSN 242
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT+ R L + +K ETGGLSG PL ST L+ ++Y+L G+L +IG GG+ S + A+
Sbjct: 243 TTIARPASLRSAHKGETGGLSGAPLFEPSTALLRQVYRLAGGRLTLIGCGGISSPEQAYA 302
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
KI+AGASLVQ+Y +F Y GP L+ +K L LL+++G+ SV++AVG
Sbjct: 303 KIRAGASLVQLYAAFAYAGPRLIPELKRGLAALLKRDGFASVAEAVG 349
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +NVSSPNT LR LQ + +L +L V R + PP+LVKIAPDL+ D
Sbjct: 166 AAYVTINVSSPNTPGLRDLQGEAKLAAILAAVASARAGAPKQ--PPVLVKIAPDLAPDAV 223
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRK 153
+ + + + + DVA V N + A+LR
Sbjct: 224 EPLVETCIAN--------DVAGLIVSNTTIARPASLRS 253
>gi|427734137|ref|YP_007053681.1| dihydroorotate oxidase A [Rivularia sp. PCC 7116]
gi|427369178|gb|AFY53134.1| dihydroorotate oxidase A [Rivularia sp. PCC 7116]
Length = 379
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 140/243 (57%), Gaps = 18/243 (7%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L LKP P L+ I +L + + + D + YFVVNVSSPNT LR
Sbjct: 145 KLTLKPNP--LIPIGINLGKSKVTPLEEAANDYRHSFNLLKNYGDYFVVNVSSPNTPGLR 202
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
KLQ L +L + + N PI VKI+PDL + +I V L K+ G+
Sbjct: 203 KLQDAAMLSSILDALQQENNLQK-----PIFVKISPDLEWEAITEI--VSLAQSYKLAGI 255
Query: 213 IVSNTTVDRYEYLDAR--------YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIG 264
I +NTT+ R E L+ + EE GG+SG+P+R STE+I +++ ++G++PIIG
Sbjct: 256 IATNTTIKR-EGLNTKILAQTGKSLSEEAGGISGKPVRKTSTEVIKYIWQQSQGEIPIIG 314
Query: 265 VGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VGG+F+ +DA++KI AGA LVQIYT +VY GP ++ I L L++ G NS+S+AVG
Sbjct: 315 VGGIFTAEDAWDKITAGACLVQIYTGWVYQGPGIIRSILQGLLLKLEQNGLNSISEAVGL 374
Query: 325 AHK 327
A K
Sbjct: 375 AVK 377
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+GD YFVVNVSSPNT LRKLQ L +L + + N PI VKI+PDL
Sbjct: 184 NYGD---YFVVNVSSPNTPGLRKLQDAAMLSSILDALQQENNLQK-----PIFVKISPDL 235
Query: 111 SLDEKKDIADVV 122
+ +I +
Sbjct: 236 EWEAITEIVSLA 247
>gi|448329848|ref|ZP_21519144.1| dihydroorotate dehydrogenase 2 [Natrinema versiforme JCM 10478]
gi|445613467|gb|ELY67168.1| dihydroorotate dehydrogenase 2 [Natrinema versiforme JCM 10478]
Length = 356
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 156/283 (55%), Gaps = 19/283 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPLP--PIL 103
G ++ G V Y P LR+ +A +++ + + +++L P P+
Sbjct: 85 FGFVEIGTVTPYPQSGNDRPRLFRLREDEAMVNRMGFNGQGMERVKSRLEADGTPSIPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V + S DE++ I D V D + A Y VVNVS PNT + + L+
Sbjct: 145 VNVGKMNSSDEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPEEFDEGSPEHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E N V PILVKI PD + D+ D+V + +DG++ +NT+ R
Sbjct: 199 AIFETL-EAENDRDV----PILVKIGPDEPEESVFDLVDIV--REFDLDGIVATNTSTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
E LD+ +EE GGLSG+PL ++ST +I + + T G+LPIIGVGGV S + A+ KI+AG
Sbjct: 252 -EGLDSPRQEEWGGLSGKPLEDRSTAVIRSLAEYTDGELPIIGVGGVDSAESAYAKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
ASLVQ+YT FVY GP RI L LL+++G++SV AVGA
Sbjct: 311 ASLVQLYTGFVYEGPSTAKRINRGLSALLERDGFSSVEDAVGA 353
>gi|407451143|ref|YP_006722867.1| Dihydroorotate dehydrogenase [Riemerella anatipestifer RA-CH-1]
gi|403312127|gb|AFR34968.1| Dihydroorotate dehydrogenase [Riemerella anatipestifer RA-CH-1]
Length = 340
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 118/174 (67%), Gaps = 7/174 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETRNQLAVKPLPPILVKIAPDLSL 192
D YFVVNVSSPNT NLR LQ K+ L LL + +E +N++ KP IL+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRDLQEKEPLTKLLNLLQIENQNKVKRKP---ILLKIAPDLTD 225
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
+ D+ D+V + + G+I +NTT+ R E + + K E GGLSG+PLR ++TE+I +
Sbjct: 226 SQLLDVIDIV--KETNIAGVIATNTTISR-EGVKSITKNEVGGLSGKPLRERATEVIRFL 282
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + G PIIGVGG+ S +DA EK+KAGASLVQ+YT FVY GP LV RI +
Sbjct: 283 SEKSGGAFPIIGVGGIHSEEDALEKLKAGASLVQLYTGFVYEGPALVKRINKRI 336
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETRNQLALKPLPPILVKIAPDLSL 112
D YFVVNVSSPNT NLR LQ K+ L LL + +E +N++ K PIL+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRDLQEKEPLTKLLNLLQIENQNKVKRK---PILLKIAPDLTD 225
Query: 113 DEKKDIADVVLDS-VKGIL 130
+ D+ D+V ++ + G++
Sbjct: 226 SQLLDVIDIVKETNIAGVI 244
>gi|120436856|ref|YP_862542.1| dihydroorotate dehydrogenase 2 [Gramella forsetii KT0803]
gi|189038423|sp|A0M4D0.1|PYRD_GRAFK RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|117579006|emb|CAL67475.1| dihydroorotate dehydrogenase [Gramella forsetii KT0803]
Length = 340
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 123/175 (70%), Gaps = 5/175 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D +YFVVNVSSPNT NLR+LQ K+ LK LL T+ + +N+ +P PIL+KIAPDL+ +
Sbjct: 168 DYVNYFVVNVSSPNTPNLRELQDKEPLKDLLNTL-QKKNEQKKRP-KPILLKIAPDLTDE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI ++V ++K + G+I +NTT+ R E L + K E GGLSG+PL +STE+I +
Sbjct: 226 QLMDIIEIVQETK--IAGVIATNTTISR-EGLKSENKNEMGGLSGKPLTKRSTEVIRFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
+ + PIIGVGG+ + +DA EK++AGASLVQ+YT F+Y GP L+ I ++ E
Sbjct: 283 EKSNKAFPIIGVGGIHTAEDAIEKLEAGASLVQLYTGFIYEGPALIKDINQKILE 337
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D +YFVVNVSSPNT NLR+LQ K+ LK LL T ++ +N+ +P PIL+KIAPDL+ +
Sbjct: 168 DYVNYFVVNVSSPNTPNLRELQDKEPLKDLLNT-LQKKNEQKKRP-KPILLKIAPDLTDE 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V ++ + G++
Sbjct: 226 QLMDIIEIVQETKIAGVI 243
>gi|443320883|ref|ZP_21049957.1| dihydroorotate oxidase A [Gloeocapsa sp. PCC 73106]
gi|442789388|gb|ELR99047.1| dihydroorotate oxidase A [Gloeocapsa sp. PCC 73106]
Length = 371
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 137/225 (60%), Gaps = 12/225 (5%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I +L + + + D ++ F + A YFVVNVSSPNT LR LQ ++QL+ +
Sbjct: 150 IPIGINLCKSKITPLENAAQDYLESFRYFKNCADYFVVNVSSPNTPGLRSLQGEEQLEGI 209
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
++T+ + NQ PILVKI+PDL + I + L +K ++ GL+ +NTT ++
Sbjct: 210 IETL-QQENQGQH----PILVKISPDLDWNAIASI--IALATKHQLAGLVATNTTTEKTG 262
Query: 224 YLDARYK-----EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ EE GG+SGEPL+ +ST +I +++ T+GKLPIIGVGG+F+ +DA+ KI
Sbjct: 263 LKTKKLNGNPLLEEAGGISGEPLKERSTAIIRFIWQQTQGKLPIIGVGGIFTPEDAWSKI 322
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
AGASL+Q+YT ++Y GP +V I L L+ G +S+A+G
Sbjct: 323 TAGASLLQVYTGWIYQGPWMVKTILQGLVGRLEATGLTHLSEAIG 367
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
F + A YFVVNVSSPNT LR LQ ++QL+ +++T ++ NQ PILVKI+PDL
Sbjct: 178 FKNCADYFVVNVSSPNTPGLRSLQGEEQLEGIIET-LQQENQGQH----PILVKISPDLD 232
Query: 112 LDEKKDIADVVLDSVK 127
+ IA ++ + K
Sbjct: 233 WNA---IASIIALATK 245
>gi|424888751|ref|ZP_18312354.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393174300|gb|EJC74344.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 362
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+++A P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEMAATSGRRIPVFLKIAPDLTEEGMDDIAAEALSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTAVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L I L +L+ +E +S+ +
Sbjct: 316 YSCMVYEGPGLPGDIVRGLSKLMDREKVSSIRE 348
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R+++A P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEMAATSGRRIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|375011581|ref|YP_004988569.1| dihydroorotate dehydrogenase, subfamily 2 [Owenweeksia
hongkongensis DSM 17368]
gi|359347505|gb|AEV31924.1| dihydroorotate dehydrogenase, subfamily 2 [Owenweeksia
hongkongensis DSM 17368]
Length = 346
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ LK LL + ++ N P PIL+KIAPDL+
Sbjct: 170 DYVDYFVVNVSSPNTPNLRALQEKEPLKKLL-SALKNENMAQAHP-KPILLKIAPDLTDS 227
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE---TGGLSGEPLRNKSTELIS 250
+ DI ++V D+K +DG+I +NTT+ R + + E GGLSG P+R ++TE+IS
Sbjct: 228 QLDDIIEIVRDTK--IDGIIATNTTISRADLKTHSTEVEKIGAGGLSGMPVRQRATEVIS 285
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
++ + G PII VGG+F+ +DA EK+KAGASLVQ+Y+ F+Y GP ++ RI
Sbjct: 286 YLHTKSNGAFPIIAVGGIFTAEDALEKLKAGASLVQVYSGFIYEGPAMIKRI 337
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K+ LK LL + ++ N P PIL+KIAPDL+
Sbjct: 170 DYVDYFVVNVSSPNTPNLRALQEKEPLKKLL-SALKNENMAQAHP-KPILLKIAPDLTDS 227
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V D+ + GI+
Sbjct: 228 QLDDIIEIVRDTKIDGII 245
>gi|406695368|gb|EKC98676.1| dihydroorotate dehydrogenase [Trichosporon asahii var. asahii CBS
8904]
Length = 1201
Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats.
Identities = 91/197 (46%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K AD D +KG+ G A VVNVSSPNT LR LQ++D L LL VV+ RN +
Sbjct: 236 KTSAADSDDDYIKGVQLLGPYADVLVVNVSSPNTPGLRALQSRDSLTRLLSAVVKERNAI 295
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG 234
AV LP + VK+ DLS DE D+A V K VDG+I+SNTT+ R L + ETG
Sbjct: 296 AVDGLPKVAVKVTCDLSEDELADVAASV--RKAGVDGVIISNTTIRRDLGLKSENANETG 353
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG+PL + + ++ L +PIIG GG+F+G+DA + AGAS+VQ+YTSF Y
Sbjct: 354 GLSGKPLFPYALNGVRQLRPLLPPNIPIIGCGGIFTGQDALDFAHAGASMVQLYTSFGYR 413
Query: 295 GPPLVTRIKSELEELLQ 311
G IK+E+ LL+
Sbjct: 414 GVGTPRLIKNEISSLLE 430
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G A VVNVSSPNT LR LQ++D L LL VV+ RN +A+ LP + V
Sbjct: 246 YIKGVQLLGPYADVLVVNVSSPNTPGLRALQSRDSLTRLLSAVVKERNAIAVDGLPKVAV 305
Query: 105 KIAPDLSLDEKKDIADVV 122
K+ DLS DE D+A V
Sbjct: 306 KVTCDLSEDELADVAASV 323
>gi|401886927|gb|EJT50938.1| dihydroorotate dehydrogenase, precursor [Trichosporon asahii var.
asahii CBS 2479]
Length = 1201
Score = 157 bits (398), Expect = 5e-36, Method: Composition-based stats.
Identities = 91/197 (46%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K AD D +KG+ G A VVNVSSPNT LR LQ++D L LL VV+ RN +
Sbjct: 236 KTSAADSDDDYIKGVQLLGPYADVLVVNVSSPNTPGLRALQSRDSLTRLLSAVVKERNAI 295
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG 234
AV LP + VK+ DLS DE D+A V K VDG+I+SNTT+ R L + ETG
Sbjct: 296 AVDGLPKVAVKVTCDLSEDELADVAASV--RKAGVDGVIISNTTIRRDLGLKSENANETG 353
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG+PL + + ++ L +PIIG GG+F+G+DA + AGAS+VQ+YTSF Y
Sbjct: 354 GLSGKPLFPYALNGVRQLRPLLPPNIPIIGCGGIFTGQDALDFAHAGASMVQLYTSFGYR 413
Query: 295 GPPLVTRIKSELEELLQ 311
G IK+E+ LL+
Sbjct: 414 GVGTPRLIKNEISSLLE 430
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ G A VVNVSSPNT LR LQ++D L LL VV+ RN +A+ LP + V
Sbjct: 246 YIKGVQLLGPYADVLVVNVSSPNTPGLRALQSRDSLTRLLSAVVKERNAIAVDGLPKVAV 305
Query: 105 KIAPDLSLDEKKDIADVV 122
K+ DLS DE D+A V
Sbjct: 306 KVTCDLSEDELADVAASV 323
>gi|254780434|ref|YP_003064847.1| dihydroorotate dehydrogenase 2 [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040111|gb|ACT56907.1| dihydroorotate dehydrogenase 2 [Candidatus Liberibacter asiaticus
str. psy62]
Length = 362
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 131/217 (60%), Gaps = 8/217 (3%)
Query: 103 LVKIAP----DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
L KI P ++L KD D +LD V GI F +A YF +N+SSPNT LR LQ K
Sbjct: 127 LSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKK 186
Query: 159 QLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
L+ LL V++TR + +K PI +KI+PDLS +E DIA VL K V+G+IVSN
Sbjct: 187 NLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHK--VEGIIVSN 244
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT+ R + E+ GGLSG PL KST ++++ + K+ IIG GG+ S KDA +
Sbjct: 245 TTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALD 304
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
KI AGA+L+Q+Y++ +Y G L RI L + L KE
Sbjct: 305 KIMAGANLIQLYSAMIYEGISLPKRIIQGLSDFLNKE 341
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F +A YF +N+SSPNT LR LQ K L+ LL V++TR + +K PI
Sbjct: 153 YVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPI 212
Query: 103 LVKIAPDLSLDEKKDIA-DVVLDSVKGIL 130
+KI+PDLS +E DIA +V+ V+GI+
Sbjct: 213 FLKISPDLSEEELDDIAVEVLSHKVEGII 241
>gi|126660479|ref|ZP_01731587.1| dihydroorotate dehydrogenase [Cyanothece sp. CCY0110]
gi|126618238|gb|EAZ88999.1| dihydroorotate dehydrogenase [Cyanothece sp. CCY0110]
Length = 385
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 148/267 (55%), Gaps = 25/267 (9%)
Query: 67 NTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSV 126
+ A L +L A +Q + ++ Q + +P I +L + + +D V
Sbjct: 122 DQAALNRLGANNQGAQQVAQTLQKAWQRQPRQIP-----IGINLCKSKSTPLDQAAMDYV 176
Query: 127 KGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK---HLLKTVVETRNQLAVKPLPPIL 183
A YFVVNVSSPNT LR LQ +QL H L++V + + PIL
Sbjct: 177 GSFRYLEKDADYFVVNVSSPNTPGLRSLQEGEQLNVILHELQSVNQGKK--------PIL 228
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGL 236
VKI+PDL+ + K I + L ++ G+I +NTT+ R E +EE GG+
Sbjct: 229 VKISPDLNWEAIKLI--IKLAKTYELAGIIATNTTIKREGLKTNILEKTGNPIQEEAGGI 286
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG+P+R +STE+I +Y+ T+G LPIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y GP
Sbjct: 287 SGQPIRKRSTEVIRFIYEQTQGTLPIIGVGGIFTAEDAWEKITAGASLLQLYTGWIYQGP 346
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVG 323
+T I L + L K + +S+AVG
Sbjct: 347 WCITNINQGLVKKLNKYKLSHISEAVG 373
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 11/66 (16%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLK---HLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
A YFVVNVSSPNT LR LQ +QL H L++V + + PILVKI+PDL+
Sbjct: 186 ADYFVVNVSSPNTPGLRSLQEGEQLNVILHELQSVNQGKK--------PILVKISPDLNW 237
Query: 113 DEKKDI 118
+ K I
Sbjct: 238 EAIKLI 243
>gi|448336924|ref|ZP_21526011.1| dihydroorotate dehydrogenase 2 [Natrinema pallidum DSM 3751]
gi|445627262|gb|ELY80587.1| dihydroorotate dehydrogenase 2 [Natrinema pallidum DSM 3751]
Length = 356
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 151/284 (53%), Gaps = 19/284 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQA---KDQLKHLLKTVVETRNQLALKPLPPIL 103
G ++ G V Y P LR+ +A + V++R + P P+
Sbjct: 85 FGFVEIGTVTPYPQAGNDRPRLFRLREDEAMINRMGFNGQGMDRVKSRLEADGTPTMPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V + S E++ I D V D + A Y VVNVS PNT + + + L+
Sbjct: 145 VNVGKMNSSSEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEGSPEHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E N V PILVKI PD + D+ D+V + +DG++ +NT+ R
Sbjct: 199 AIFETL-EAENDRNV----PILVKIGPDEPAESVFDLVDIV--QEFDLDGIVATNTSTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
E L + +EE GGLSG+PL + ST +I + T G LPIIGVGGV S + A+EKI+AG
Sbjct: 252 -EGLTSPRREEWGGLSGKPLADPSTAVIRSLADYTDGDLPIIGVGGVDSAESAYEKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
ASLVQ+YT FVY GP TRI L LL+++G++SV AVGA
Sbjct: 311 ASLVQLYTGFVYQGPSTATRINRGLAALLERDGFSSVEDAVGAG 354
>gi|395780270|ref|ZP_10460737.1| dihydroorotate dehydrogenase [Bartonella washoensis 085-0475]
gi|395419537|gb|EJF85837.1| dihydroorotate dehydrogenase [Bartonella washoensis 085-0475]
Length = 363
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D GI F DVA+YF +N+SSPNT LR LQ +D L+ LL + +
Sbjct: 136 INIGANKDTVNRIDDYTAGIACFYDVANYFTINISSPNTPGLRDLQVRDSLRLLLNAISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K L PI +KIAPDLS +E D+A+ + S DGLI+SNTT+ R ++
Sbjct: 196 ARSEQKEKCGFLVPIFLKIAPDLSEEELDDVAEEIKFSD--FDGLIISNTTLSRKGLTNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL +ST ++++M + ++ IIGVGGV A EK+KAGA L+Q+
Sbjct: 254 LLASEEGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVRDAYTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ +L+Q++ +++
Sbjct: 314 YSGMVYEGPHLAVTILKEVLQLMQQDSVDTI 344
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F DVA+YF +N+SSPNT LR LQ +D L+ LL + + R++ K L PI
Sbjct: 151 YTAGIACFYDVANYFTINISSPNTPGLRDLQVRDSLRLLLNAISQARSEQKEKCGFLVPI 210
Query: 103 LVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVS 144
+KIAPDLS +E D+A+ + KF D + N +
Sbjct: 211 FLKIAPDLSEEELDDVAEEI--------KFSDFDGLIISNTT 244
>gi|121601702|ref|YP_988616.1| dihydroorotate dehydrogenase 2 [Bartonella bacilliformis KC583]
gi|421760427|ref|ZP_16197244.1| dihydroorotate dehydrogenase 2 [Bartonella bacilliformis INS]
gi|226710747|sp|A1URL3.1|PYRD_BARBK RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|120613879|gb|ABM44480.1| dihydroorotate oxidase [Bartonella bacilliformis KC583]
gi|411175711|gb|EKS45736.1| dihydroorotate dehydrogenase 2 [Bartonella bacilliformis INS]
Length = 362
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D V GI F DVA YF VN+SSPNT LR LQA+D L+ L+K + +
Sbjct: 136 VNIGANKDTLNRIGDYVAGITCFYDVADYFTVNISSPNTPGLRDLQARDNLRLLIKEISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K PI +K+APDL+ E D+A + S DGL+VSNTT+ R +
Sbjct: 196 ARSENKKKHGFSIPIFLKLAPDLTEQELDDVAAEL--SLSDFDGLVVSNTTLFRQGLKKS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + + IIGVGGV+ + A EKIKAGA LVQ
Sbjct: 254 AFMNEGGGLSGRPLFERSTIVLAKMRQKLGKDIAIIGVGGVWDAQTALEKIKAGADLVQF 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I ++ +++Q++G +++
Sbjct: 314 YSGMVYEGPDLAKNITKDVLQMMQQDGVDTI 344
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F DVA YF VN+SSPNT LR LQA+D L+ L+K + + R++ K PI
Sbjct: 151 YVAGITCFYDVADYFTVNISSPNTPGLRDLQARDNLRLLIKEISQARSENKKKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIA 119
+K+APDL+ E D+A
Sbjct: 211 FLKLAPDLTEQELDDVA 227
>gi|421588012|ref|ZP_16033347.1| dihydroorotate dehydrogenase 2 [Rhizobium sp. Pop5]
gi|403707358|gb|EJZ22380.1| dihydroorotate dehydrogenase 2 [Rhizobium sp. Pop5]
Length = 362
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRIADYVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ A K P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDEEAAKSGRKIPVFLKIAPDLTEEGMDDIAAEALSHA--LDGLIVSNTTLSRDGLKDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG PL KST +++ M K LPIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 RQAKEAGGLSGVPLFEKSTSVLARMRKRVGPDLPIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I L LL +E S+
Sbjct: 316 YSCMVYEGPGLPGDIVRGLSALLDREKAGSI 346
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R++ A K P+
Sbjct: 153 YVAGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEEAAKSGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ + DIA
Sbjct: 213 FLKIAPDLTEEGMDDIA 229
>gi|416389331|ref|ZP_11685330.1| Dihydroorotate dehydrogenase [Crocosphaera watsonii WH 0003]
gi|357264240|gb|EHJ13153.1| Dihydroorotate dehydrogenase [Crocosphaera watsonii WH 0003]
Length = 377
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 145/263 (55%), Gaps = 25/263 (9%)
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGIL 130
L +L A +Q ++ + Q + +P I +L + + D V
Sbjct: 126 LNRLGANNQGSEIITQTLAQTWQRQPRQIP-----IGINLCKSKITPLDKAASDYVGSFS 180
Query: 131 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLK---HLLKTVVETRNQLAVKPLPPILVKIA 187
D A YFVVNVSSPNT LR LQA +QL H L++V + + P+ VKI+
Sbjct: 181 YLVDYADYFVVNVSSPNTPGLRSLQAGEQLNVILHELQSVNQGKK--------PLFVKIS 232
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEP 240
PDL+ + K I D L + G+I +NTT+ R E +EE GG+SG+P
Sbjct: 233 PDLNWEAIKLIID--LAKTYDLAGIIATNTTIKREGLKTKILEKTGHPMEEEAGGISGQP 290
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
LR +STE+I +Y+ T+G LPIIGVGG+FS +DA+EKI AGASL+Q+YT ++Y GP +
Sbjct: 291 LRQRSTEVIRFIYEQTQGSLPIIGVGGIFSPEDAWEKITAGASLLQLYTGWIYGGPWCIP 350
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
I L + L+K + +SQAVG
Sbjct: 351 TIGQGLIKQLEKYKLSHISQAVG 373
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLK---HLLKTVVETRNQLALKPLPPILVKIAPDL 110
D A YFVVNVSSPNT LR LQA +QL H L++V + + P+ VKI+PDL
Sbjct: 184 DYADYFVVNVSSPNTPGLRSLQAGEQLNVILHELQSVNQGKK--------PLFVKISPDL 235
Query: 111 SLDEKKDIADVV 122
+ + K I D+
Sbjct: 236 NWEAIKLIIDLA 247
>gi|49473938|ref|YP_031980.1| dihydroorotate dehydrogenase 2 [Bartonella quintana str. Toulouse]
gi|81827652|sp|Q6G159.1|PYRD_BARQU RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|49239441|emb|CAF25790.1| dihydroorotate dehydrogenase [Bartonella quintana str. Toulouse]
Length = 362
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D GI F D+A YF VN+SSPNT LR LQA+D L L+ + +
Sbjct: 136 INIGANKDTVDKIDDYATGIACFYDIADYFTVNISSPNTPGLRDLQARDSLHLLMNALSQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K PI +KIAPDLS E D+A+ + S DGLIVSNTT+ R D+
Sbjct: 196 ARREQKKKHGFSVPIFLKIAPDLSEKELDDVAEEMKLSD--FDGLIVSNTTLSRQGLRDS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + ++ IIGVGG+ + A EKIKAGA L+Q+
Sbjct: 254 KLSGEKGGLSGCPLFERSTIVLAKMRQKLGKEIAIIGVGGIKDAQTALEKIKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ + +Q++G +++
Sbjct: 314 YSGIVYEGPDLAITILKEILQFMQQDGVDTI 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F D+A YF VN+SSPNT LR LQA+D L L+ + + R + K PI
Sbjct: 151 YATGIACFYDIADYFTVNISSPNTPGLRDLQARDSLHLLMNALSQARREQKKKHGFSVPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDLS E D+A+
Sbjct: 211 FLKIAPDLSEKELDDVAE 228
>gi|354564913|ref|ZP_08984089.1| Dihydroorotate dehydrogenase [Fischerella sp. JSC-11]
gi|353550039|gb|EHC19478.1| Dihydroorotate dehydrogenase [Fischerella sp. JSC-11]
Length = 379
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 134/213 (62%), Gaps = 19/213 (8%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ L+S + + + GD YFVVNVSSPNT LR LQ L +L ++T N K
Sbjct: 172 AEDYLNSFRLLKELGD---YFVVNVSSPNTPGLRSLQDATMLSSIL-AALKTEN----KS 223
Query: 179 LPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR-------YEYLDARYK 230
PI VKIAPDL E + IAD++ L ++ G+I +NTT+ R +
Sbjct: 224 QKPIFVKIAPDL---EWEAIADIISLAQTYQLAGIIATNTTIRRDGLKTQVIAKTGKSPQ 280
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
EE GG+SG P+R+++TE+I +++ T+GK+PIIGVGG+F+ +DA+EKI AGA LVQ+YT
Sbjct: 281 EEAGGISGMPVRDRATEIIRFIWQQTQGKIPIIGVGGIFTPEDAWEKITAGACLVQVYTG 340
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
++Y GP ++ I L L++ G NS+SQAVG
Sbjct: 341 WIYSGPLMIRGILEGLLAKLEQTGLNSISQAVG 373
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ L +L ++T N K PI VKIAPDL
Sbjct: 184 ELGDYFVVNVSSPNTPGLRSLQDATMLSSIL-AALKTEN----KSQKPIFVKIAPDL--- 235
Query: 114 EKKDIADVV 122
E + IAD++
Sbjct: 236 EWEAIADII 244
>gi|163761316|ref|ZP_02168391.1| dihydroorotate dehydrogenase [Hoeflea phototrophica DFL-43]
gi|162281473|gb|EDQ31769.1| dihydroorotate dehydrogenase [Hoeflea phototrophica DFL-43]
Length = 360
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K+ D V D V GI F D+A YF VNVSSPNT LR LQ ++ L LL V+
Sbjct: 138 INIGANKEAEDRVGDYVAGIAAFADIASYFTVNVSSPNTPGLRNLQTREALSELLTRVLA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R++ A P+ +KIAPDLS + DIA L K +DGLIVSNTT+ R +
Sbjct: 198 ERDRCAGNI--PVFLKIAPDLSEPDLDDIAAECLAQK--LDGLIVSNTTLSREGLGNDAS 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG + +ST ++++M + +P+IGVGG+ S + A EK++AGA LVQIYT
Sbjct: 254 KSEAGGLSGRLVFERSTIVLAKMRERLGPDMPLIGVGGIDSAETAAEKMRAGADLVQIYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKE 313
F+Y GP L RI L ++ +E
Sbjct: 314 GFIYGGPLLPGRILRGLSKICDRE 337
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ GI F D+A YF VNVSSPNT LR LQ ++ L LL V+ R++ A P+ +
Sbjct: 153 YVAGIAAFADIASYFTVNVSSPNTPGLRNLQTREALSELLTRVLAERDRCAGN--IPVFL 210
Query: 105 KIAPDLSLDEKKDIA 119
KIAPDLS + DIA
Sbjct: 211 KIAPDLSEPDLDDIA 225
>gi|403530194|ref|YP_006664723.1| dihydroorotate dehydrogenase 2 [Bartonella quintana RM-11]
gi|403232266|gb|AFR26009.1| dihydroorotate dehydrogenase 2 [Bartonella quintana RM-11]
Length = 362
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D GI F D+A YF VN+SSPNT LR LQA+D L L+ + +
Sbjct: 136 INIGANKDTVDKIDDYATGITCFYDIADYFTVNISSPNTPGLRDLQARDSLHLLMNALSQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K PI +KIAPDLS E D+A+ + S DGLIVSNTT+ R D+
Sbjct: 196 ARREQKKKHGFSVPIFLKIAPDLSEKELDDVAEEMKLSD--FDGLIVSNTTLSRQGLRDS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+ E GGLSG PL +ST ++++M + ++ IIGVGG+ + A EKIKAGA L+Q+
Sbjct: 254 KLSGEKGGLSGCPLFERSTIVLAKMRQKLGKEIAIIGVGGIKDAQTALEKIKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ + +Q++G +++
Sbjct: 314 YSGIVYEGPDLAITILKEILQFMQQDGVDTI 344
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F D+A YF VN+SSPNT LR LQA+D L L+ + + R + K PI
Sbjct: 151 YATGITCFYDIADYFTVNISSPNTPGLRDLQARDSLHLLMNALSQARREQKKKHGFSVPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDLS E D+A+
Sbjct: 211 FLKIAPDLSEKELDDVAE 228
>gi|399928008|ref|ZP_10785366.1| dihydroorotate dehydrogenase 2 [Myroides injenensis M09-0166]
Length = 339
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ L LL ++ +N K PIL+KIAPDL+ D+ D
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALL-NALQLKNNAKAK-TKPILLKIAPDLTDDQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I D+V D+K + G+I +NTT+ R E L + +K+ETGGLSG+PL +STE+I + + +
Sbjct: 230 IIDIVNDTK--IAGVIATNTTIGR-EGLHSSHKDETGGLSGKPLTKRSTEVIRFLAQKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ S +DA EK++AGASL+Q+YT F+Y GP L+ I +L
Sbjct: 287 NAFPIIGVGGIHSPEDALEKLEAGASLIQLYTGFIYEGPGLIKAINKKL 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ L LL ++ +N K PIL+KIAPDL+ D+ D
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALL-NALQLKNNAKAK-TKPILLKIAPDLTDDQLLD 229
Query: 118 IADVVLDS-VKGIL 130
I D+V D+ + G++
Sbjct: 230 IIDIVNDTKIAGVI 243
>gi|390594119|gb|EIN03533.1| dihydroorotate dehydrogenase [Punctularia strigosozonata HHB-11173
SS5]
Length = 469
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 123/202 (60%), Gaps = 4/202 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ + V D V+G+ FG A V+NVSSPNT LR LQ + L LL VV+ RN L
Sbjct: 221 KESPLESVDDFVRGVQVFGPHADVLVINVSSPNTPGLRNLQKRSHLGDLLAGVVQARNDL 280
Query: 175 AVKPL--PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE 232
P +++K++PDL+ D+ ++IA+VV S VDG+IVSNTT+ R L K E
Sbjct: 281 QASSSRKPKLMLKLSPDLTADDVREIAEVVRSSG--VDGVIVSNTTISRPRGLTHPNKTE 338
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL++ S ++ + +PIIG GG+ SG DA + +AGAS+VQIYT F
Sbjct: 339 AGGLSGPPLKHLSLAVLRTLRSNLPESIPIIGCGGITSGADALDYARAGASMVQIYTHFG 398
Query: 293 YHGPPLVTRIKSELEELLQKEG 314
Y G RIK EL ++L++EG
Sbjct: 399 YDGVGACRRIKDELSDILRREG 420
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPI 102
++ G+ FG A V+NVSSPNT LR LQ + L LL VV+ RN Q + P +
Sbjct: 231 FVRGVQVFGPHADVLVINVSSPNTPGLRNLQKRSHLGDLLAGVVQARNDLQASSSRKPKL 290
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
++K++PDL+ D+ ++IA+VV S V G++ + ++ PN L LK
Sbjct: 291 MLKLSPDLTADDVREIAEVVRSSGVDGVI-VSNTTISRPRGLTHPNKTEAGGLSGP-PLK 348
Query: 162 HLLKTVVET 170
HL V+ T
Sbjct: 349 HLSLAVLRT 357
>gi|158334803|ref|YP_001515975.1| dihydroorotate oxidase [Acaryochloris marina MBIC11017]
gi|189038412|sp|B0CA74.1|PYRD_ACAM1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|158305044|gb|ABW26661.1| dihydroorotate oxidase [Acaryochloris marina MBIC11017]
Length = 374
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 139/216 (64%), Gaps = 19/216 (8%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
++ +AD V S + + +GD YFVVNVSSPNT LR LQA +QL +L + +
Sbjct: 169 EQAVADYV-GSFQLLKTYGD---YFVVNVSSPNTPGLRSLQAVEQLAPILAGLQAENTEG 224
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR---YEYLDARYK 230
P+LVKIAPDL E KDIA +V L ++ G+I +NTT+ R E + A
Sbjct: 225 K-----PLLVKIAPDL---EWKDIAAIVDLAQVHQLAGIIATNTTIRRDLKTERIAATGN 276
Query: 231 ---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
EE GG+SG P+R++ST++I ++K T+G+LPIIGVGG+F+ +DA+EK+ AGASL+Q+
Sbjct: 277 VPSEEAGGISGAPVRSRSTDVIRFIHKQTQGQLPIIGVGGIFTAEDAWEKLCAGASLLQV 336
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
YT +VY GP +V RI L +Q+EG +S+ VG
Sbjct: 337 YTGWVYEGPWMVRRILEGLLVKMQEEGIQQLSEIVG 372
>gi|67922252|ref|ZP_00515766.1| Dihydroorotate dehydrogenase 2 [Crocosphaera watsonii WH 8501]
gi|67855955|gb|EAM51200.1| Dihydroorotate dehydrogenase 2 [Crocosphaera watsonii WH 8501]
Length = 377
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 145/263 (55%), Gaps = 25/263 (9%)
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGIL 130
L +L A +Q ++ + Q + +P I +L + + D V
Sbjct: 126 LNRLGANNQGSEIITQTLAQTWQRQPRQIP-----IGINLCKSKITPLDKAASDYVGSFS 180
Query: 131 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLK---HLLKTVVETRNQLAVKPLPPILVKIA 187
D A YFVVNVSSPNT LR LQA +QL H L++V + + P+ VKI+
Sbjct: 181 YLVDYADYFVVNVSSPNTPGLRSLQAGEQLNVILHELQSVNQGKK--------PLFVKIS 232
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEP 240
PDL+ + K I D L + G+I +NTT+ R E +EE GG+SG+P
Sbjct: 233 PDLNWEGIKLIID--LAKTYDLAGIIATNTTIKREGLKTKILEKTGHPMEEEAGGISGQP 290
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
LR +STE+I +Y+ T+G LPIIGVGG+FS +DA+EKI AGASL+Q+YT ++Y GP +
Sbjct: 291 LRQRSTEVIRFIYEQTQGSLPIIGVGGIFSPEDAWEKITAGASLLQLYTGWIYGGPWCIP 350
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
I L + L+K + +SQAVG
Sbjct: 351 TIGQGLIKQLEKYKLSHISQAVG 373
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLK---HLLKTVVETRNQLALKPLPPILVKIAPDL 110
D A YFVVNVSSPNT LR LQA +QL H L++V + + P+ VKI+PDL
Sbjct: 184 DYADYFVVNVSSPNTPGLRSLQAGEQLNVILHELQSVNQGKK--------PLFVKISPDL 235
Query: 111 SLDEKKDIADVV 122
+ + K I D+
Sbjct: 236 NWEGIKLIIDLA 247
>gi|357027931|ref|ZP_09089986.1| dihydroorotate dehydrogenase 2 [Mesorhizobium amorphae CCNWGS0123]
gi|355540176|gb|EHH09397.1| dihydroorotate dehydrogenase 2 [Mesorhizobium amorphae CCNWGS0123]
Length = 358
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D +G+ +F A Y VN+SSPNT LR +QA++QL LL V+
Sbjct: 138 VNIGANKDSADRIGDYERGVARFARYASYLTVNISSPNTPGLRNMQAREQLGELLSRVIA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + KP P+ +KIAPDL E +DIA V + + +DG+IVSNTT+ R A
Sbjct: 198 ARAAASAKP--PVFLKIAPDLVEAELEDIAAEVTEKQ--LDGVIVSNTTISRPALRSASV 253
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG+PL +ST ++++M KL IIGVGGV S A EKI+AGA LVQ+YT
Sbjct: 254 TGEAGGLSGKPLFERSTIVLAKMRKLLGPDRAIIGVGGVDSTDAALEKIRAGADLVQLYT 313
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSV 318
+Y GP L RI + + KE S+
Sbjct: 314 GMIYAGPALPGRILTGMVGFADKERLKSI 342
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ +F A Y VN+SSPNT LR +QA++QL LL V+ R + K PP+ +KIA
Sbjct: 156 GVARFARYASYLTVNISSPNTPGLRNMQAREQLGELLSRVIAARAAASAK--PPVFLKIA 213
Query: 108 PDLSLDEKKDIA 119
PDL E +DIA
Sbjct: 214 PDLVEAELEDIA 225
>gi|418940468|ref|ZP_13493833.1| Dihydroorotate dehydrogenase [Rhizobium sp. PDO1-076]
gi|375052882|gb|EHS49284.1| Dihydroorotate dehydrogenase [Rhizobium sp. PDO1-076]
Length = 362
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDAEDRIADYVAGIRRFYPVASYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + A++ P+ +KIAPDL+ + DIA+V L +DGLIVSNTT+ R D
Sbjct: 198 ARQEEALRAGRRIPVFLKIAPDLTEEGMDDIAEVAL--AHDLDGLIVSNTTLARDGLSDP 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
+E GGLSG+PL +KST +++ M K L IIGVGGV S + A EKI+AGA LVQ+
Sbjct: 256 AVAKEAGGLSGKPLFDKSTAVLARMRKRVGRDLAIIGVGGVSSAETALEKIRAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L RI L L+ +E ++ +
Sbjct: 316 YSCMVYEGPGLPARIVRGLSSLIDREEVGNIRE 348
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI +F VA YF N+SSPNT LR LQA++ L LL V+ R + AL+ P+
Sbjct: 153 YVAGIRRFYPVASYFTANISSPNTPGLRDLQARESLAALLSAVLAARQEEALRAGRRIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA+V L
Sbjct: 213 FLKIAPDLTEEGMDDIAEVAL 233
>gi|363755832|ref|XP_003648132.1| hypothetical protein Ecym_8019 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891332|gb|AET41315.1| Hypothetical protein Ecym_8019 [Eremothecium cymbalariae
DBVPG#7215]
Length = 444
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 134/219 (61%), Gaps = 19/219 (8%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L + KD D V D VKG+ KF +A V+NVSSPNT LR LQ + +L LL VV
Sbjct: 219 INLGKNKD-GDEVKDFVKGVEKFQALADVLVINVSSPNTPGLRDLQHEGKLVELLSQVVA 277
Query: 170 TRNQL--------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
R+ L A PP+LVKIAPDL+ E + +A+ K KVDG+IVSNTT+ R
Sbjct: 278 KRDSLIDQGNALGAKTHKPPVLVKIAPDLTEPELQSVAEAA--KKSKVDGIIVSNTTIQR 335
Query: 222 YEYLDARYKEET-----GGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAF 275
+ L KEET GGLSG+PL+ S + + + K TK L ++G GG+ SG+DA
Sbjct: 336 PDTLYT--KEETINNQAGGLSGKPLKPFSLQALRTISKYTKDSGLILVGCGGISSGQDAI 393
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
E KAGA+ VQ+YTS+ Y GP +V RIK E+ E L+ EG
Sbjct: 394 EFAKAGATFVQLYTSYAYRGPGVVARIKDEVTEQLKMEG 432
>gi|399040488|ref|ZP_10735826.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium sp. CF122]
gi|398061275|gb|EJL53071.1| dihydroorotate dehydrogenase, subfamily 2 [Rhizobium sp. CF122]
Length = 362
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 138 VNIGANKDSEDRIGDYVLGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ A K P+ +KIAPDL+ + DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDAEAEKAGRKIPVFLKIAPDLTAEGLDDIATEALSHA--LDGLIVSNTTLSRDGLRDQ 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG+PL +KST ++++M K LPIIGVGGV S + A EKIKAGA LVQ+
Sbjct: 256 RQAKEAGGLSGKPLFDKSTVVLAKMRKRVGPALPIIGVGGVSSAETALEKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I L +LL +E S+
Sbjct: 316 YSCMVYEGPGLPGTIVRGLSKLLDREQVRSI 346
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++LGI +F VA YF N+SSPNT LR LQA++ L LL V+ R+ A K P+
Sbjct: 153 YVLGIRRFYSVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDAEAEKAGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ + DIA L
Sbjct: 213 FLKIAPDLTAEGLDDIATEAL 233
>gi|399992411|ref|YP_006572651.1| dihydroorotate dehydrogenase PyrD [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656966|gb|AFO90932.1| dihydroorotate dehydrogenase PyrD [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 352
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA++P ++ L+L KD D D K + G+ + VNVSSPNT LR
Sbjct: 125 RLAVRPQDAVI-----GLNLGANKDSGDRAADFAKVLAHCGEHLDFATVNVSSPNTEKLR 179
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ K L LL V++TR+ L + P+ +KIAPDL +DIA+V +++ +D +
Sbjct: 180 DLQGKAALSALLNGVIDTRDGLDRRV--PVFLKIAPDLDRAGIEDIAEVAVETG--IDAV 235
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT+ R L++ +++E GGLSG PL KST +++++ +L G++P++GVGG+ + +
Sbjct: 236 IATNTTLKRTG-LNSSHRDEAGGLSGAPLFEKSTRVLAQLSELLNGRVPLVGVGGISNAE 294
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAV 322
A+ KI AGAS VQ YT+ VY G LV I L++LL ++G+ +V+ AV
Sbjct: 295 QAYAKICAGASAVQFYTAMVYGGLSLVGDIARGLDDLLARDGHANVADAV 344
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSL 112
G+ + VNVSSPNT LR LQ K L LL V++TR+ L + P+ +KIAPDL
Sbjct: 160 GEHLDFATVNVSSPNTEKLRDLQGKAALSALLNGVIDTRDGLDRR--VPVFLKIAPDLDR 217
Query: 113 DEKKDIADVVLDS 125
+DIA+V +++
Sbjct: 218 AGIEDIAEVAVET 230
>gi|50294984|ref|XP_449903.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701768|sp|Q6SZS5.1|PYRD_CANGA RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOD; Short=DHODase;
Short=DHOdehase; AltName: Full=Dihydroorotate oxidase;
Flags: Precursor
gi|38326785|gb|AAR17523.1| dihydroorotate dehydrogenase 2 [Candida glabrata]
gi|49529217|emb|CAG62883.1| unnamed protein product [Candida glabrata]
Length = 439
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 14/208 (6%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
D V D +KG+ KF +A V+NVSSPNT LR LQ + +L +LL ++ R+ + KP
Sbjct: 222 GDEVKDYLKGVEKFQSLADVLVINVSSPNTPGLRDLQNEAKLTNLLSEIITKRDSQSNKP 281
Query: 179 --------LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL---DA 227
PP+LVKIAPDL+ E + I + K KVDG+IVSNTT+ R L D
Sbjct: 282 NALGKQNHKPPVLVKIAPDLTEPELQSIVEAA--KKSKVDGIIVSNTTIQRPNTLKTQDE 339
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ + GGLSG+PL+ + + + + K K L ++G GG+ SGKDA E KAGA+ VQ
Sbjct: 340 TLRNQVGGLSGKPLKPFALKAMKAVSKYAKDSDLVLVGCGGISSGKDAIEFAKAGATFVQ 399
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YTS+ Y GP L+ RIK E+ E L+KEG
Sbjct: 400 LYTSYAYVGPALIARIKDEVAEELKKEG 427
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 35/154 (22%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP------ 98
+L G+ KF +A V+NVSSPNT LR LQ + +L +LL ++ R+ + KP
Sbjct: 228 YLKGVEKFQSLADVLVINVSSPNTPGLRDLQNEAKLTNLLSEIITKRDSQSNKPNALGKQ 287
Query: 99 --LPPILVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
PP+LVKIAPDL+ E + I + S V GI+ V++ + PNT
Sbjct: 288 NHKPPVLVKIAPDLTEPELQSIVEAAKKSKVDGII----VSN---TTIQRPNT------- 333
Query: 156 AKDQLKHLLKTVVET-RNQ---LAVKPLPPILVK 185
LKT ET RNQ L+ KPL P +K
Sbjct: 334 --------LKTQDETLRNQVGGLSGKPLKPFALK 359
>gi|429747840|ref|ZP_19281084.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429162283|gb|EKY04615.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 342
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILLKIAPDLTDEQLSD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I +++ + + G+I +NTT+ R E L + ++ETGGLSG+PL+++STE+I + + +
Sbjct: 230 IIEII--QETHIAGVIATNTTIGR-EGLVSYNQKETGGLSGKPLKSRSTEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+FS DA EK++AGASL+Q+YT F+Y G L+ RI +L
Sbjct: 287 HAFPIIGVGGIFSETDALEKLEAGASLIQLYTGFIYEGAGLIKRINKQL 335
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + + YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+
Sbjct: 159 YLICFKQLFNYVDYFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ ++ DI +++ ++ + G++
Sbjct: 217 KIAPDLTDEQLSDIIEIIQETHIAGVI 243
>gi|425434933|ref|ZP_18815397.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9432]
gi|389675410|emb|CCH95467.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 9432]
Length = 382
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 IIIIDLAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYRQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEVNGLTNINQAVG 376
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL +
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWE 241
>gi|327405369|ref|YP_004346207.1| dihydroorotate dehydrogenase [Fluviicola taffensis DSM 16823]
gi|327320877|gb|AEA45369.1| Dihydroorotate dehydrogenase [Fluviicola taffensis DSM 16823]
Length = 359
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 121/168 (72%), Gaps = 7/168 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR+LQ K+ L LL+T+++ R++ + PI +KIAPDL+ + D
Sbjct: 182 YFVVNVSSPNTPNLRELQDKEPLTKLLQTLMDKRSE--INSSKPIFLKIAPDLTDSQLDD 239
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGLSGEPLRNKSTELISEMYK 254
I +V +++ + G+I +NTT++R + + + E GG+SG+PL+N+STE++ +YK
Sbjct: 240 IIAIVKETE--IAGIIATNTTIERGNLVTSSAQVEAIGMGGVSGKPLKNRSTEVVRYLYK 297
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ G PIIGVGG++S +DA EK++AGASL+Q+Y+ F+Y GP LV +I
Sbjct: 298 NSNGSFPIIGVGGIYSAEDALEKLEAGASLIQLYSGFIYEGPGLVKKI 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR+LQ K+ L LL+T+++ R++ + PI +KIAPDL+ + D
Sbjct: 182 YFVVNVSSPNTPNLRELQDKEPLTKLLQTLMDKRSE--INSSKPIFLKIAPDLTDSQLDD 239
Query: 118 IADVVLDS-VKGIL 130
I +V ++ + GI+
Sbjct: 240 IIAIVKETEIAGII 253
>gi|310816596|ref|YP_003964560.1| dihydroorotate dehydrogenase 2 [Ketogulonicigenium vulgare Y25]
gi|385234209|ref|YP_005795551.1| dihydroorotate oxidase A [Ketogulonicigenium vulgare WSH-001]
gi|308755331|gb|ADO43260.1| dihydroorotate dehydrogenase 2 [Ketogulonicigenium vulgare Y25]
gi|343463120|gb|AEM41555.1| Dihydroorotate oxidase A [Ketogulonicigenium vulgare WSH-001]
Length = 350
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 129/214 (60%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + G + VNVSSPNT LR LQ + L LL V+
Sbjct: 137 LNLGANKDSDDRASDFARVLTHCGAHLDFATVNVSSPNTEKLRDLQGRAALSALLHGVMA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
LA +PLP I +KIAPDL+ DE DIA V + + +I +NTT+ R E L +R+
Sbjct: 197 ANAGLA-RPLP-IFLKIAPDLTEDELADIATVA--GEVGLSAIIATNTTLSR-EGLKSRH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL KST +++ + +T LP+IGVGGV +G A+ KI+AGAS VQ+YT
Sbjct: 252 AAEKGGLSGAPLFEKSTRVLARLSTMTD--LPLIGVGGVATGAQAYAKIRAGASAVQLYT 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G +V I +L+ LL ++G+ +V+ AVG
Sbjct: 310 ALVYGGISMVADIARDLDALLARDGFANVADAVG 343
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL V+ LA +PL PI +KIAPDL+ DE D
Sbjct: 165 FATVNVSSPNTEKLRDLQGRAALSALLHGVMAANAGLA-RPL-PIFLKIAPDLTEDELAD 222
Query: 118 IADVV 122
IA V
Sbjct: 223 IATVA 227
>gi|452819009|gb|EME26123.1| dihydroorotate oxidase, partial [Galdieria sulphuraria]
Length = 180
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
Query: 158 DQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNT 217
D L+H++ T +L+ K PPILVKI+PDL+ +E DI + + VDG+++SNT
Sbjct: 2 DLLEHVIAIRDATLKELSPKGRPPILVKISPDLTDEELADIVTTCM--RLSVDGIVISNT 59
Query: 218 TVDR-YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
T+ R + L+ + + GGLSG PL+N ST +I ++Y++T G+L I+GVGGV S +DA++
Sbjct: 60 TIQRPHGLLEQQVAMQEGGLSGPPLKNISTSIIQKVYRMTNGRLVIVGVGGVSSAEDAYD 119
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
KI+AGASL+++YT+ Y GP L+ +IK L ELLQ++G+ SV +A+G
Sbjct: 120 KIRAGASLIELYTALAYEGPALIRKIKIGLSELLQRDGFQSVQEAIG 166
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 78 DQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
D L+H++ T +L+ K PPILVKI+PDL+ +E DI + SV GI+
Sbjct: 2 DLLEHVIAIRDATLKELSPKGRPPILVKISPDLTDEELADIVTTCMRLSVDGIV 55
>gi|420150005|ref|ZP_14657167.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga sp. oral
taxon 335 str. F0486]
gi|394752543|gb|EJF36223.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga sp. oral
taxon 335 str. F0486]
Length = 342
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILLKIAPDLTDEQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V + + G+I +NTT+ R E L + ++ETGGLSG+PL+N+STE+I + + +
Sbjct: 230 IIEIV--QETHIAGVIATNTTIGR-EGLVSDNQKETGGLSGKPLKNRSTEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+FS D EK++AGASL+Q+YT F+Y G L+ RI +L
Sbjct: 287 HAFPIIGVGGIFSETDVLEKLEAGASLIQLYTGFIYEGAGLIKRINKQL 335
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + + YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+
Sbjct: 159 YLICFKQLFNYVDYFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ ++ DI ++V ++ + G++
Sbjct: 217 KIAPDLTDEQLLDIIEIVQETHIAGVI 243
>gi|163755264|ref|ZP_02162384.1| aconitate hydratase [Kordia algicida OT-1]
gi|161324684|gb|EDP96013.1| aconitate hydratase [Kordia algicida OT-1]
Length = 339
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 117/170 (68%), Gaps = 7/170 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
YFVVNVSSPNT LR+LQ K+ L LL T+ N+ K +P PIL+KIAPDL+ ++ +
Sbjct: 172 YFVVNVSSPNTPGLRELQDKEPLTKLLMTLQTMNNE---KDVPKPILLKIAPDLTNEQLE 228
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DI +V D+K + G+I +NTT+ R E L + KEE GGLSG+PL N+STE+I + + +
Sbjct: 229 DIIQIVADTK--IAGVIATNTTISR-EGLQSEDKEEMGGLSGKPLTNRSTEVIRFLAEKS 285
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ S +DA EK+ AGA LVQ+YT F+Y GP L+ I +L
Sbjct: 286 NKAFPIIGVGGIHSAEDALEKLNAGADLVQLYTGFIYEGPKLIKNINKKL 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
YFVVNVSSPNT LR+LQ K+ L LL T+ N+ K +P PIL+KIAPDL+ ++ +
Sbjct: 172 YFVVNVSSPNTPGLRELQDKEPLTKLLMTLQTMNNE---KDVPKPILLKIAPDLTNEQLE 228
Query: 117 DIADVVLDS 125
DI +V D+
Sbjct: 229 DIIQIVADT 237
>gi|386856373|ref|YP_006260550.1| dihydroorotate dehydrogenase 2 [Deinococcus gobiensis I-0]
gi|379999902|gb|AFD25092.1| dihydroorotate dehydrogenase 2 [Deinococcus gobiensis I-0]
Length = 361
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 136/202 (67%), Gaps = 5/202 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL--PP 181
D +K + +VA FVVNVSSPNT LR LQA D L L++ VV V L PP
Sbjct: 160 DYLKCVRAVQEVADAFVVNVSSPNTPGLRALQAADDLGALVRAVVAEVEAGRVSRLSRPP 219
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVK+APDL + + VLD+ GLIVSNTT+ R + L ++E+TGGLSG PL
Sbjct: 220 VLVKLAPDLHPADFEASVGAVLDAGAH--GLIVSNTTLAR-DGLTHPHREQTGGLSGRPL 276
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+STEL+ E Y+L++G++P++GVGG+F+ +DA+ K++AGASLV++Y++ +Y GP LV R
Sbjct: 277 TERSTELVREAYRLSRGRVPVVGVGGIFTAEDAYAKLRAGASLVEVYSALIYEGPGLVGR 336
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
I L LL+++G SV++ VG
Sbjct: 337 INRGLSALLERDGARSVAEIVG 358
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE--TRNQLALKPLPPILVKIAPDLS 111
+VA FVVNVSSPNT LR LQA D L L++ VV +++ PP+LVK+APDL
Sbjct: 170 EVADAFVVNVSSPNTPGLRALQAADDLGALVRAVVAEVEAGRVSRLSRPPVLVKLAPDLH 229
Query: 112 LDEKKDIADVVLDS 125
+ + VLD+
Sbjct: 230 PADFEASVGAVLDA 243
>gi|365959645|ref|YP_004941212.1| dihydroorotate dehydrogenase 2 [Flavobacterium columnare ATCC
49512]
gi|365736326|gb|AEW85419.1| dihydroorotate dehydrogenase 2 [Flavobacterium columnare ATCC
49512]
Length = 347
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 123/181 (67%), Gaps = 9/181 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET--RNQLAVKPLP----PILVKIA 187
D YFVVNVSSPNT LR+LQ K+ L +LL+++ E + + V+ + PIL+KIA
Sbjct: 168 DYVDYFVVNVSSPNTPGLRELQDKEPLTNLLRSLQELNFKKYVGVEAMQGQVKPILLKIA 227
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTE 247
PDL+ ++ DI D+V DSK + G+I +NTT+ R E L + YK E GGLSG+PL ++STE
Sbjct: 228 PDLTNEQLLDIIDIVKDSK--IAGVIATNTTISR-EGLQSAYKNEIGGLSGKPLTDRSTE 284
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+I + + + PIIGVGG+ S +DA +K+ AGASLVQ+YT F+Y GP L+ I ++
Sbjct: 285 VIRFLSENSNQAFPIIGVGGIHSAQDAIDKLSAGASLVQLYTGFIYEGPALIKSINKKIL 344
Query: 308 E 308
E
Sbjct: 345 E 345
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET--RNQLALKPLP----PILVKIA 107
D YFVVNVSSPNT LR+LQ K+ L +LL+++ E + + ++ + PIL+KIA
Sbjct: 168 DYVDYFVVNVSSPNTPGLRELQDKEPLTNLLRSLQELNFKKYVGVEAMQGQVKPILLKIA 227
Query: 108 PDLSLDEKKDIADVVLDS-VKGIL 130
PDL+ ++ DI D+V DS + G++
Sbjct: 228 PDLTNEQLLDIIDIVKDSKIAGVI 251
>gi|374724700|gb|EHR76780.1| Dihydroorotate dehydrogenase/oxidase [uncultured marine group II
euryarchaeote]
Length = 379
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 125/198 (63%), Gaps = 14/198 (7%)
Query: 139 FVVNVSSPNTANLRKLQAKDQLKHLLKTV------VETRNQLAVKPLPPILVKIAPDLSL 192
FV+NVSSPNT NLR+LQ D L ++K + ++Q +VKPL LVKIAPDLS
Sbjct: 180 FVINVSSPNTPNLRELQHDDALASIVKACNAVNMTMSQQHQTSVKPL---LVKIAPDLSD 236
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL---DARYKEETGGLSGEPLRNKSTELI 249
D+ + + ++ C DG++ +NTT+ R + D + E+TGG+SG P+ +ST +I
Sbjct: 237 DQLVAVVNTAREAGC--DGIVATNTTIQRPQATTDKDKKIFEQTGGMSGAPVNVRSTAMI 294
Query: 250 SEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
+Y+LT G+ PI+GVGG+ + +DA+ KI AGA L+Q Y+ FV+ GP L + + +
Sbjct: 295 HRIYELTNGEWPIVGVGGISNAEDAWAKIGAGACLLQAYSGFVFEGPALTKSVVNGVRMK 354
Query: 310 LQKEGYNSVSQAVGAAHK 327
LQ+ Y S +A+G AH+
Sbjct: 355 LQQSPYESFDEAIGFAHR 372
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 59 FVVNVSSPNTANLRKLQAKDQLKHLLK---TVVETRNQLALKPLPPILVKIAPDLSLDE 114
FV+NVSSPNT NLR+LQ D L ++K V T +Q + P+LVKIAPDLS D+
Sbjct: 180 FVINVSSPNTPNLRELQHDDALASIVKACNAVNMTMSQQHQTSVKPLLVKIAPDLSDDQ 238
>gi|228471564|ref|ZP_04056339.1| dihydroorotate oxidase [Capnocytophaga gingivalis ATCC 33624]
gi|228277140|gb|EEK15820.1| dihydroorotate oxidase [Capnocytophaga gingivalis ATCC 33624]
Length = 343
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 120/176 (68%), Gaps = 5/176 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ L+ LL + E +L PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRSLQEKEPLQKLLTLLQEANGKLPKSK--PILLKIAPDLTDEQLMD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I D+V + ++ G+I +NTT+ R E L + K ETGGLSG PL +STE+I + + ++
Sbjct: 230 IIDIV--EQTRIAGVIATNTTITR-EGLTSEKKVETGGLSGRPLTQRSTEVIRFLAEKSQ 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
+ PIIGVGG+ + +DA EK++AGASLVQI+T F+Y GP L+ RI + + ++ E
Sbjct: 287 HRFPIIGVGGIHTPEDALEKLRAGASLVQIFTGFIYEGPSLIKRINKAIIKRMKSE 342
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ L+ LL + E +L PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRSLQEKEPLQKLLTLLQEANGKLPKS--KPILLKIAPDLTDEQLMD 229
Query: 118 IADVV 122
I D+V
Sbjct: 230 IIDIV 234
>gi|329894009|ref|ZP_08270017.1| Dihydroorotate dehydrogenase [gamma proteobacterium IMCC3088]
gi|328923352|gb|EGG30671.1| Dihydroorotate dehydrogenase [gamma proteobacterium IMCC3088]
Length = 341
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 121/175 (69%), Gaps = 10/175 (5%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLP 180
LD+V G A Y VVN+SSPNT NLR+LQ + LKHL+ ++ E +L +
Sbjct: 157 LDAVHG------YADYIVVNLSSPNTPNLRQLQFGEPLKHLVSSLREQCYRLDAVNEKRV 210
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P++VKIAPD+S D+ +AD ++++ VDG+I +NTT++R L Y +E GGLSG P
Sbjct: 211 PLVVKIAPDMSHDDLLSVADTLMEAS--VDGIIATNTTIERDAVLGHPYAQEAGGLSGVP 268
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
+R++STE+++ +Y+ KG+LPIIGVGG+F + A EK +AGASL+Q+YT F+Y G
Sbjct: 269 VRSRSTEVVTALYQHLKGELPIIGVGGIFDERSAAEKREAGASLLQLYTGFIYRG 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 20 GEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 79
G+ TP N L + + V + A Y VVN+SSPNT NLR+LQ +
Sbjct: 139 GKNATTPLENALDDYRQCLDAVHGY-----------ADYIVVNLSSPNTPNLRQLQFGEP 187
Query: 80 LKHLLKTVVETRNQLAL--KPLPPILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
LKHL+ ++ E +L + P++VKIAPD+S D+ +AD +++ SV GI+
Sbjct: 188 LKHLVSSLREQCYRLDAVNEKRVPLVVKIAPDMSHDDLLSVADTLMEASVDGII 241
>gi|170078793|ref|YP_001735431.1| dihydroorotate dehydrogenase 2 [Synechococcus sp. PCC 7002]
gi|169886462|gb|ACB00176.1| dihydroorotate dehydrogenase [Synechococcus sp. PCC 7002]
Length = 381
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 14/200 (7%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
VA YFVVNVSSPNT LR LQ +Q++ +L+T+ + ++ PI +KI+PDL +
Sbjct: 187 VADYFVVNVSSPNTPGLRSLQGGEQIQPILETLQQANHKQQ-----PIFIKISPDLDWEA 241
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTE 247
+I + D ++ G+I +NTT R E EE GG+SG P+R +STE
Sbjct: 242 IANIVKIAQD--YQLAGIIATNTTTRRDGLKTQILEKTGNPVTEEAGGISGAPVRQRSTE 299
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+I +Y T+G LPIIGVGG+F+ A+EK+ AGASL+Q+YT ++Y GP ++ I L
Sbjct: 300 VIRFIYGQTQGSLPIIGVGGIFTADHAWEKMTAGASLLQLYTGWIYKGPWIIPNILRGLL 359
Query: 308 ELLQKEGYNSVSQAVGAAHK 327
E L+ N +S+A+G A+K
Sbjct: 360 EKLETHNLNHISEAIGMANK 379
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
VA YFVVNVSSPNT LR LQ +Q++ +L+T+ + ++ PI +KI+PDL +
Sbjct: 187 VADYFVVNVSSPNTPGLRSLQGGEQIQPILETLQQANHKQQ-----PIFIKISPDLDWEA 241
Query: 115 KKDIADVVLD-SVKGIL 130
+I + D + GI+
Sbjct: 242 IANIVKIAQDYQLAGII 258
>gi|393779317|ref|ZP_10367562.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga sp. oral
taxon 412 str. F0487]
gi|392610591|gb|EIW93368.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga sp. oral
taxon 412 str. F0487]
Length = 348
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILLKIAPDLTDEQLSD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V ++ + G+I +NTT+ R E L + ++ETGGLSG+PL+ +STE+I + + +
Sbjct: 230 IIEIVQETH--IAGVIATNTTIGR-EGLVSDNQKETGGLSGKPLKGRSTEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+FS DA EK++AGASL+Q+YT F+Y G L+ RI +L
Sbjct: 287 HAFPIIGVGGIFSETDALEKLEAGASLIQLYTGFIYEGAGLIKRINKQL 335
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + + YFVVNVSSPNT NLR LQ K+ LK LL T+ T L K PIL+
Sbjct: 159 YLICFEQLFNYVDYFVVNVSSPNTPNLRTLQEKEPLKQLLSTLQNT--NLTHKNPKPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ ++ DI ++V ++ + G++
Sbjct: 217 KIAPDLTDEQLSDIIEIVQETHIAGVI 243
>gi|340621476|ref|YP_004739927.1| DHOdehase [Capnocytophaga canimorsus Cc5]
gi|339901741|gb|AEK22820.1| DHOdehase [Capnocytophaga canimorsus Cc5]
Length = 341
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 124/179 (69%), Gaps = 5/179 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ L LL T+ + RN VKP PIL+KIAPDL+ +
Sbjct: 168 DYVDYFVVNVSSPNTPNLRTLQEKEPLTQLLNTL-QQRNVQKVKP-KPILLKIAPDLTDE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI D+V +++ + G+I +NTT+ R E L + +E GGLSG+PL+++STE+I +
Sbjct: 226 QLLDIIDIVKETQ--IAGVIATNTTIAR-EGLKSSESQEIGGLSGKPLKHRSTEVIRFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
+ ++ PIIGVGG+ S DA EK++AGASLVQ+YT F+Y G L+ +I + ++ +K
Sbjct: 283 EKSQKAFPIIGVGGIHSAADAIEKLEAGASLVQLYTGFIYEGAGLIKQINRHIIQMNKK 341
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K+ L LL T ++ RN +KP PIL+KIAPDL+ +
Sbjct: 168 DYVDYFVVNVSSPNTPNLRTLQEKEPLTQLLNT-LQQRNVQKVKP-KPILLKIAPDLTDE 225
Query: 114 EKKDIADVVLDS 125
+ DI D+V ++
Sbjct: 226 QLLDIIDIVKET 237
>gi|448346072|ref|ZP_21534960.1| dihydroorotate dehydrogenase 2 [Natrinema altunense JCM 12890]
gi|445633082|gb|ELY86282.1| dihydroorotate dehydrogenase 2 [Natrinema altunense JCM 12890]
Length = 356
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 155/283 (54%), Gaps = 19/283 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPLP--PIL 103
G ++ G V Y P LR+ +A +++ + + + +L P P+
Sbjct: 85 FGFVEIGTVTPYPQAGNDRPRLFRLREDEAMINRMGFNGQGMERVKARLEADGTPDIPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V + S E++ I D V D + A Y VVNVS PNT + + + L+
Sbjct: 145 VNVGKMNSSSEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEGSPEHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E N V P+LVKI PD + D+ D+V + +DG++ +NT+ R
Sbjct: 199 TIFETL-EAENDRNV----PLLVKIGPDEPEESVFDLVDIV--QEFDLDGIVATNTSTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
E L + +EE GGLSG+PL ++ST +I + T G LPIIGVGGV S + A+EKI+AG
Sbjct: 252 -EGLTSPRREEWGGLSGQPLADRSTAVIRSLADYTDGDLPIIGVGGVDSAESAYEKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
ASLVQ+YT+FVY GP TRI L LL+++G++SV AVGA
Sbjct: 311 ASLVQLYTAFVYQGPSTATRINRGLAALLERDGFSSVEDAVGA 353
>gi|448340797|ref|ZP_21529767.1| dihydroorotate dehydrogenase 2 [Natrinema gari JCM 14663]
gi|445629737|gb|ELY83013.1| dihydroorotate dehydrogenase 2 [Natrinema gari JCM 14663]
Length = 356
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 155/283 (54%), Gaps = 19/283 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPLP--PIL 103
G ++ G V Y P LR+ +A +++ + + +++L P P+
Sbjct: 85 FGFVEIGTVTPYPQAGNDRPRLFRLREDEAMINRMGFNGQGMERVKSRLEADGTPDIPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V + S E++ I D V D + A Y VVNVS PNT + + + L+
Sbjct: 145 VNVGKMNSSSEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEGSPEHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E N V PILVKI PD + D+ D+V + +DG++ +NT+ R
Sbjct: 199 TIFETL-EAENDRNV----PILVKIGPDEPAESVFDLVDIV--QEFDLDGIVATNTSTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
+ L + +EE GGLSG+PL ++ST +I + T G LPIIGVGGV S + A+EKI+AG
Sbjct: 252 -DGLASPRREEWGGLSGKPLADRSTAVIRSLADYTDGDLPIIGVGGVDSAESAYEKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
ASLVQ+YT FVY GP TRI L LL+++G++SV AVGA
Sbjct: 311 ASLVQLYTGFVYQGPSTATRINRGLAALLERDGFSSVEDAVGA 353
>gi|425452937|ref|ZP_18832752.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 7941]
gi|389765086|emb|CCI08975.1| Dihydroorotate dehydrogenase [Microcystis aeruginosa PCC 7941]
Length = 380
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 IIIIDLAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYQQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEVNGLTNINQAVG 376
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL +
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWE 241
>gi|218246697|ref|YP_002372068.1| dihydroorotate dehydrogenase 2 [Cyanothece sp. PCC 8801]
gi|254788884|sp|B7JXU8.1|PYRD_CYAP8 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|218167175|gb|ACK65912.1| Dihydroorotate oxidase [Cyanothece sp. PCC 8801]
Length = 377
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 150/266 (56%), Gaps = 19/266 (7%)
Query: 69 ANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKG 128
A L +L A +Q ++ + Q + + +P I +L + + + D V
Sbjct: 124 AVLNRLGANNQGAEIMAQTLAEIWQRSPRNIP-----IGINLCKSKITPLDEAAQDYVGS 178
Query: 129 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAP 188
+ A YFVVNVSSPNT LR LQ +QL +L+ + Q A + P+ VKI+P
Sbjct: 179 FSYLENQADYFVVNVSSPNTPGLRSLQEGEQLNSILQAL-----QAANQHQKPLFVKISP 233
Query: 189 DLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA-------RYKEETGGLSGEPL 241
DL +E+ + + L + G+I +NTT+ R + +EE GG+SG P+
Sbjct: 234 DL--EEEAILTIIELAQTHCLAGIIATNTTIKRDRLTTQILPETGNKIQEEAGGISGLPI 291
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R++STE+I +Y+ T+GKLPIIGVGG+F+ DA+ KI AGASL+Q+YT ++Y GP ++
Sbjct: 292 RDRSTEIIGFIYQKTQGKLPIIGVGGIFTPDDAWNKIIAGASLLQLYTGWIYQGPWIIPD 351
Query: 302 IKSELEELLQKEGYNSVSQAVGAAHK 327
I L + L++ G + +SQAVG HK
Sbjct: 352 IVRGLGDKLKQLGLSHISQAVGINHK 377
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
A YFVVNVSSPNT LR LQ +QL +L+ + Q A + P+ VKI+PDL
Sbjct: 186 ADYFVVNVSSPNTPGLRSLQEGEQLNSILQAL-----QAANQHQKPLFVKISPDL 235
>gi|440756084|ref|ZP_20935285.1| dihydroorotate oxidase [Microcystis aeruginosa TAIHU98]
gi|440173306|gb|ELP52764.1| dihydroorotate oxidase [Microcystis aeruginosa TAIHU98]
Length = 380
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL ++
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWEDI 243
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGLSGEPLRNKSTEL 248
I D+ ++ G++ +NTT R EE GG+SG+PLR +STE+
Sbjct: 244 IIIIDLAFS--YQLAGIVATNTTTKRTGLKTTILPETGKPITEEAGGISGQPLRERSTEV 301
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I +Y+ T+G LPIIGVGG+FS DA+EKI AGASL+QIYT ++Y GP LV+ I L E
Sbjct: 302 IRFIYQQTQGNLPIIGVGGIFSLDDAWEKITAGASLLQIYTGWLYRGPWLVSNILQGLTE 361
Query: 309 LLQKEGYNSVSQAVG 323
L+ G +++QAVG
Sbjct: 362 KLEVNGLTNINQAVG 376
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
A YFVVNVSSPNT LR LQ+ +QL +L +++T NQ KPL LVKI+PDL +
Sbjct: 189 ADYFVVNVSSPNTPGLRSLQSGEQLDKILD-ILQTENQ-GRKPL---LVKISPDLEWE 241
>gi|328859082|gb|EGG08192.1| hypothetical protein MELLADRAFT_47830 [Melampsora larici-populina
98AG31]
Length = 643
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 8/205 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--- 176
D + D GI +FG +A VVNVSSPNT LR LQ+K + LL +V++R+ LA
Sbjct: 291 DSIEDFTIGIQRFGPLADVLVVNVSSPNTPGLRSLQSKSIFQQLLFEIVKSRDGLASTKE 350
Query: 177 --KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EET 233
K P +LVK+APDLS E D+ + + +DG+IVSNTT+ R + E
Sbjct: 351 GKKVRPALLVKVAPDLSYQELVDVGEAA--REAGIDGIIVSNTTIARPPQAGSDLSVNEV 408
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GGLSG PL+ + +S +Y T+GK+P+IG GG+ +G+DA + KAGASLVQ+YTS Y
Sbjct: 409 GGLSGPPLKPLAIRALSTIYTTTEGKVPLIGCGGISNGQDAIDFAKAGASLVQLYTSLTY 468
Query: 294 HGPPLVTRIKSELEELLQKEGYNSV 318
G L +IK E++ELL + +N +
Sbjct: 469 EGIGLPRKIKDEVKELLNGKHWNEI 493
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 16/141 (11%)
Query: 1 MVGLDESTCSRI----LSRVFRSGE-WGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDV 55
+V LD+ C+ + L R R G+ G N S+ + + + GI +FG +
Sbjct: 252 VVPLDDRLCALVDDLDLPRSLRDGKVLGVNLGKNKWSAPDSIEDFTI-----GIQRFGPL 306
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL-----KPLPPILVKIAPDL 110
A VVNVSSPNT LR LQ+K + LL +V++R+ LA K P +LVK+APDL
Sbjct: 307 ADVLVVNVSSPNTPGLRSLQSKSIFQQLLFEIVKSRDGLASTKEGKKVRPALLVKVAPDL 366
Query: 111 SLDEKKDIADVVLDS-VKGIL 130
S E D+ + ++ + GI+
Sbjct: 367 SYQELVDVGEAAREAGIDGII 387
>gi|448714983|ref|ZP_21702242.1| dihydroorotate dehydrogenase 2 [Halobiforma nitratireducens JCM
10879]
gi|445788216|gb|EMA38936.1| dihydroorotate dehydrogenase 2 [Halobiforma nitratireducens JCM
10879]
Length = 358
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 122/189 (64%), Gaps = 8/189 (4%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A Y VVNVS PNT + + + L+ + +T+ ++ PILVKI PD D
Sbjct: 173 ADYVVVNVSCPNTPDEFDETSAEHLERIFETLAAENDRDL-----PILVKIGPDSPEDAI 227
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
++ DVV D VDG++ +NT+ R E L++ +EE GGLSG+P+ ++ST +I +
Sbjct: 228 LELVDVVRD--LGVDGIVATNTSTSR-EGLESPAREEWGGLSGKPIEDRSTAVIRTIADH 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T G+LPI+GVGGV S + A+EKI+AGASLVQ+YT FVYHGP RI L LL+++G+
Sbjct: 285 TDGELPIVGVGGVDSAESAYEKIRAGASLVQLYTGFVYHGPSTAKRINRGLAALLERDGF 344
Query: 316 NSVSQAVGA 324
+SV +AVGA
Sbjct: 345 SSVEEAVGA 353
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVS PNT + + + L+ + +T+ N L PILVKI PD D
Sbjct: 173 ADYVVVNVSCPNTPDEFDETSAEHLERIFETLA-AENDRDL----PILVKIGPDSPEDAI 227
Query: 116 KDIADVVLD-SVKGIL 130
++ DVV D V GI+
Sbjct: 228 LELVDVVRDLGVDGIV 243
>gi|367017480|ref|XP_003683238.1| hypothetical protein TDEL_0H01680 [Torulaspora delbrueckii]
gi|359750902|emb|CCE94027.1| hypothetical protein TDEL_0H01680 [Torulaspora delbrueckii]
Length = 439
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 126/208 (60%), Gaps = 14/208 (6%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
D V D +KG+ +F +A V+NVSSPNT LRKLQ L +LL VV R+ L
Sbjct: 222 GDTVKDYLKGVERFQSLADVLVINVSSPNTPGLRKLQDSSTLTNLLTQVVAKRDSLVNNG 281
Query: 179 --------LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL---DA 227
PPILVK+APDL+ E + I D K KVDG+IV NTT+ R + L +
Sbjct: 282 NALGQSAHKPPILVKVAPDLTKTELQSIVDSA--KKSKVDGIIVCNTTIQRPKCLITQEK 339
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
K++ GGLSG+PL+ + + + + K +K L +IG GG+ +GKDA E KAGA+ VQ
Sbjct: 340 STKDQVGGLSGKPLKPIALDALRTVAKYSKDSDLVLIGCGGISNGKDAIEFAKAGATFVQ 399
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP LV +IK E+ E L+KEG
Sbjct: 400 LYTAFAYAGPGLVAKIKDEVAEELKKEG 427
>gi|126740744|ref|ZP_01756430.1| dihydroorotate dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126718259|gb|EBA14975.1| dihydroorotate dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 352
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D K + + G + VNVSSPNT LR LQ K L LL V+E
Sbjct: 137 LNLGANKDSEDRAADFAKVLAQCGKHLDFATVNVSSPNTEKLRDLQGKAALSALLHGVLE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR L + P+ +KIAPDL + +DIA V L++ +D +I +NTT+ R E L + +
Sbjct: 197 TRAGLDRRI--PVFLKIAPDLDREGIEDIAAVALETG--IDAVIATNTTLSR-EGLHSPH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+++ GGLSG PL KST +++++ +L G +P+IGVGG+ + + A+ KI AGAS VQ YT
Sbjct: 252 RDQAGGLSGAPLFEKSTRVLAQLSELLNGAVPLIGVGGISNAEQAYAKICAGASAVQFYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G L + I L+ LL ++G+ +V+ AVG+
Sbjct: 312 AMVYGGISLASDIAKGLDTLLARDGHANVAAAVGS 346
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ETR L + P+ +KIAPDL + +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALSALLHGVLETRAGLDRR--IPVFLKIAPDLDREGIED 222
Query: 118 IADVVLDS 125
IA V L++
Sbjct: 223 IAAVALET 230
>gi|334704985|ref|ZP_08520851.1| dihydroorotate dehydrogenase 2 [Aeromonas caviae Ae398]
Length = 336
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 133/227 (58%), Gaps = 14/227 (6%)
Query: 82 HLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVV 141
HL+ V E + Q + I + D +++ KD + +D V D A Y V
Sbjct: 122 HLVAKVKEAKYQGVIG----INIGKNKDTPIEQGKDDYLLCMDKVY------DHAGYIAV 171
Query: 142 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLDEKKDIA 199
N+SSPNT LR+LQ D L LL + + + +LA K P+ VKIAPDLSLDE +A
Sbjct: 172 NISSPNTPGLRQLQYGDALDELLAALKQRQQELAEKYKKYVPLAVKIAPDLSLDEIDQVA 231
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
++ K ++DG+I +NTT++R D + E GGLSG PL++KSTE+I + K G
Sbjct: 232 ASLI--KNRIDGVIATNTTLEREMIYDMPHAAEAGGLSGRPLQHKSTEVIRHLAKALDGA 289
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
LPIIGVGG+ S A EK+ AGASLVQIY+ F+Y GP LV I + +
Sbjct: 290 LPIIGVGGIDSAMAAREKLAAGASLVQIYSGFIYKGPSLVKEIVTHI 336
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+LL + K D A Y VN+SSPNT LR+LQ D L LL + + + +LA K P+
Sbjct: 155 YLLCMDKVYDHAGYIAVNISSPNTPGLRQLQYGDALDELLAALKQRQQELAEKYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDLSLDE + A ++ + + G++
Sbjct: 215 AVKIAPDLSLDEIDQVAASLIKNRIDGVI 243
>gi|302687194|ref|XP_003033277.1| hypothetical protein SCHCODRAFT_54820 [Schizophyllum commune H4-8]
gi|300106971|gb|EFI98374.1| hypothetical protein SCHCODRAFT_54820 [Schizophyllum commune H4-8]
Length = 477
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 129/215 (60%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIA-DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
++L + KD + V D V G+ FG A VVNVSSPNT LR LQ +D LK LL V
Sbjct: 216 VNLGKNKDSPQEAVDDFVAGVRTFGTSADVLVVNVSSPNTPGLRGLQERDLLKKLLSGVS 275
Query: 169 ETRNQLAVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY 224
+ R +L P +L+KI+PDL+ ++ K++A VV S VDG+IVSNTT+ R +
Sbjct: 276 QARKKLPASDFVPKGPKLLLKISPDLTPEQIKEVAQVVRASH--VDGVIVSNTTIQRPKG 333
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L ++E GGLSG PL+ + + + ++PIIG GG+ SG DA E + GA++
Sbjct: 334 LRDPKRDEAGGLSGPPLKPIALAALRTLRGQLPAEIPIIGCGGIASGADALEYAREGAAM 393
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
VQ+YT+F Y G V RIK E+ ELL KEG +S
Sbjct: 394 VQLYTAFGYDGVGTVRRIKDEITELLAKEGRTWMS 428
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----P 100
++ G+ FG A VVNVSSPNT LR LQ +D LK LL V + R +L P
Sbjct: 232 FVAGVRTFGTSADVLVVNVSSPNTPGLRGLQERDLLKKLLSGVSQARKKLPASDFVPKGP 291
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+L+KI+PDL+ ++ K++A VV S V G++
Sbjct: 292 KLLLKISPDLTPEQIKEVAQVVRASHVDGVI 322
>gi|448104941|ref|XP_004200376.1| Piso0_002962 [Millerozyma farinosa CBS 7064]
gi|448108093|ref|XP_004201007.1| Piso0_002962 [Millerozyma farinosa CBS 7064]
gi|359381798|emb|CCE80635.1| Piso0_002962 [Millerozyma farinosa CBS 7064]
gi|359382563|emb|CCE79870.1| Piso0_002962 [Millerozyma farinosa CBS 7064]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D V GI + A VVNVSSPNT LR LQ + +L LL T+VE RN+
Sbjct: 216 KNKYGDEVQDYVNGIRRMHSYADVLVVNVSSPNTPGLRDLQHESKLTSLLSTIVEERNKC 275
Query: 175 A---VKPLPPILVKIAPDLSLDEKKDIADVVLDSK-CKVDGLIVSNTTVDRYEYLDARYK 230
+ LPP+LVK+APDL E+ +A V +K KVDG+IVSNTT+ R L +
Sbjct: 276 GKNILGKLPPVLVKVAPDL---EEVGLASVATSAKTAKVDGIIVSNTTIQRPSTLKTKNP 332
Query: 231 ---EETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ GGLSG+PL+ S + + +YK TK L ++G GG+ SGKD E KAGA+ VQ
Sbjct: 333 ALVSQQGGLSGKPLKPLSLKALRTLYKYTKDSNLVLVGCGGISSGKDVLEFGKAGATFVQ 392
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKE 313
+YTSF Y GP L +I+ EL + L KE
Sbjct: 393 LYTSFAYKGPGLPAKIRDELSQELAKE 419
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA---LKP 98
+Q ++ GI + A VVNVSSPNT LR LQ + +L LL T+VE RN+ L
Sbjct: 223 VQDYVNGIRRMHSYADVLVVNVSSPNTPGLRDLQHESKLTSLLSTIVEERNKCGKNILGK 282
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
LPP+LVK+APDL +V L SV K V V N + +Q
Sbjct: 283 LPPVLVKVAPDLE--------EVGLASVATSAKTAKVDGIIVSNTT---------IQRPS 325
Query: 159 QLKHLLKTVVETRNQLAVKPLPPILVK 185
LK +V + L+ KPL P+ +K
Sbjct: 326 TLKTKNPALVSQQGGLSGKPLKPLSLK 352
>gi|428769704|ref|YP_007161494.1| dihydroorotate oxidase A [Cyanobacterium aponinum PCC 10605]
gi|428683983|gb|AFZ53450.1| dihydroorotate oxidase A [Cyanobacterium aponinum PCC 10605]
Length = 379
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 138/228 (60%), Gaps = 16/228 (7%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ I +L + ++ D D +K A YFV+NVSSPNT LR LQ +QL+ +
Sbjct: 154 IPIGINLCKSKITELNDAKEDYLKSFQVLKAHADYFVINVSSPNTPGLRSLQGGEQLEPI 213
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
L T+ ++ NQ PILVKIAPDL ++ + I V + ++ GLI +NTT+ + E
Sbjct: 214 LDTL-QSHNQGE----KPILVKIAPDLENEQIRSIIKV--SQQYQLSGLIATNTTIKK-E 265
Query: 224 YLDARY--------KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
L + EE GG+SG PLR +STE+I +Y+ T+GKLPIIGVGG+F + A+
Sbjct: 266 GLHTKILNETGKPITEEAGGISGLPLRQRSTEVIRFIYRETEGKLPIIGVGGIFDTESAW 325
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
EKI AGA+L+Q Y+ +VY GP +V I L + L++ +++SQAVG
Sbjct: 326 EKITAGATLLQFYSGWVYQGPWIVPDILQGLSQKLEENNLDNLSQAVG 373
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFV+NVSSPNT LR LQ +QL+ +L T +++ NQ PILVKIAPDL ++
Sbjct: 186 ADYFVINVSSPNTPGLRSLQGGEQLEPILDT-LQSHNQGE----KPILVKIAPDLENEQI 240
Query: 116 KDIADV 121
+ I V
Sbjct: 241 RSIIKV 246
>gi|254455863|ref|ZP_05069292.1| dihydroorotate oxidase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082865|gb|EDZ60291.1| dihydroorotate oxidase [Candidatus Pelagibacter sp. HTCC7211]
Length = 350
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 149/236 (63%), Gaps = 15/236 (6%)
Query: 88 VETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPN 147
++++++L L + V I P+ KD D + D + G+ F +VA Y VN+SSPN
Sbjct: 125 IKSKDKLGL-----VGVNIGPN------KDSNDRLNDYLIGLKTFHEVADYVTVNISSPN 173
Query: 148 TANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKC 207
T NLR +++L+ LLK++++ +N L P+ VKI+PD+ + I++++L++K
Sbjct: 174 TENLRTFHEENKLQELLKSILKEKNDLNSDI--PVAVKISPDIDESQINLISEILLENK- 230
Query: 208 KVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGG 267
+D +I+SNT+ + L + + GGLSG+P+ KS LI++ YKL KGK+ IIGVGG
Sbjct: 231 -IDAIIISNTSEASRDILIDIQRHQKGGLSGKPIETKSNILINKFYKLLKGKIKIIGVGG 289
Query: 268 VFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
V SG+ A++K AGA L+Q+YT V+ GP + IK +L++LL ++G + ++ +G
Sbjct: 290 VDSGQAAYDKFIAGADLIQLYTGMVFKGPNVAGIIKKDLKDLLLRDGVKNFTEIIG 345
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
L +L+G+ F +VA Y VN+SSPNT NLR +++L+ LLK++++ +N L P
Sbjct: 148 LNDYLIGLKTFHEVADYVTVNISSPNTENLRTFHEENKLQELLKSILKEKND--LNSDIP 205
Query: 102 ILVKIAPDLSLDEKKDIADVVLDS 125
+ VKI+PD+ + I++++L++
Sbjct: 206 VAVKISPDIDESQINLISEILLEN 229
>gi|373109817|ref|ZP_09524092.1| dihydroorotate dehydrogenase [Myroides odoratimimus CCUG 10230]
gi|423135216|ref|ZP_17122862.1| dihydroorotate dehydrogenase [Myroides odoratimimus CIP 101113]
gi|371643297|gb|EHO08853.1| dihydroorotate dehydrogenase [Myroides odoratimimus CIP 101113]
gi|371644163|gb|EHO09703.1| dihydroorotate dehydrogenase [Myroides odoratimimus CCUG 10230]
Length = 339
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 118/166 (71%), Gaps = 7/166 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
YFVVNVSSPNT NLR LQ K+ LK LL + NQ K P PIL+KIAPDL+ D+
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLKALLHGLQVKNNQ---KEAPKPILLKIAPDLTDDQLL 228
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DI ++V ++ K+ G+I +NTT+DR L + +++ETGGLSG+PL +STE+I + + +
Sbjct: 229 DIIEIV--TETKIAGVIATNTTIDRSN-LKSIHQQETGGLSGKPLTKRSTEVIRFLSEKS 285
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
PIIGVGG+ S +DA EK++AGASL+Q+YT F+Y GP L+ +I
Sbjct: 286 NKAFPIIGVGGIHSAEDAIEKLEAGASLIQLYTGFIYEGPGLIKKI 331
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
YFVVNVSSPNT NLR LQ K+ LK LL + NQ K P PIL+KIAPDL+ D+
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLKALLHGLQVKNNQ---KEAPKPILLKIAPDLTDDQLL 228
Query: 117 DIADVVLDS-VKGIL 130
DI ++V ++ + G++
Sbjct: 229 DIIEIVTETKIAGVI 243
>gi|423131470|ref|ZP_17119145.1| dihydroorotate dehydrogenase [Myroides odoratimimus CCUG 12901]
gi|423327883|ref|ZP_17305691.1| dihydroorotate dehydrogenase [Myroides odoratimimus CCUG 3837]
gi|371641886|gb|EHO07465.1| dihydroorotate dehydrogenase [Myroides odoratimimus CCUG 12901]
gi|404605884|gb|EKB05455.1| dihydroorotate dehydrogenase [Myroides odoratimimus CCUG 3837]
Length = 339
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 118/166 (71%), Gaps = 7/166 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
YFVVNVSSPNT NLR LQ K+ LK LL + NQ K P PIL+KIAPDL+ D+
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLKALLHGLQVKNNQ---KEAPKPILLKIAPDLTDDQLL 228
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DI ++V ++ K+ G+I +NTT+DR L + +++ETGGLSG+PL +STE+I + + +
Sbjct: 229 DIIEIV--TETKIAGVIATNTTIDRSN-LKSIHQQETGGLSGKPLTKRSTEVIRFLSEKS 285
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
PIIGVGG+ S +DA EK++AGASL+Q+YT F+Y GP L+ +I
Sbjct: 286 NKAFPIIGVGGIHSAEDAIEKLEAGASLIQLYTGFIYEGPGLIKKI 331
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
YFVVNVSSPNT NLR LQ K+ LK LL + NQ K P PIL+KIAPDL+ D+
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLKALLHGLQVKNNQ---KEAPKPILLKIAPDLTDDQLL 228
Query: 117 DIADVVLDS 125
DI ++V ++
Sbjct: 229 DIIEIVTET 237
>gi|226356820|ref|YP_002786560.1| dihydroorotate dehydrogenase 2 [Deinococcus deserti VCD115]
gi|259547490|sp|C1CX89.1|PYRD_DEIDV RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|226318810|gb|ACO46806.1| putative bifunctional protein: dihydroorotate oxidase
(dihydroorotate dehydrogenase)/dihydropyrimidine
dehydrogenase (NADP(+)) [Deinococcus deserti VCD115]
Length = 360
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV- 168
+++ + K + D V + + DVA FVVNVSSPNT LR LQA +L+ LL+ V+
Sbjct: 144 VNIGKNKLTEEAAQDYVACVQELYDVADAFVVNVSSPNTPGLRALQASAELEALLRAVLN 203
Query: 169 --ETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
E + + PP+LVK+APDL + + L++ V GLIVSNTT+ R + L
Sbjct: 204 ETEAQRLRTARRAPPVLVKLAPDLHPADFEASVQGALNAG--VQGLIVSNTTLSR-DGLT 260
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
++E+ GGLSG PL +ST L+ + Y+LT+G +P++GVGG+FS DA+ KI+AGASLV+
Sbjct: 261 HAHREQAGGLSGRPLTGRSTALVQDAYRLTRGAVPVVGVGGIFSADDAYAKIRAGASLVE 320
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+Y+S +Y GP L RI L +LL+++G + V AVGA
Sbjct: 321 VYSSLIYEGPGLPARIHRGLGQLLERDGISHVRDAVGA 358
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV---ETRNQLALKPL 99
Q ++ + + DVA FVVNVSSPNT LR LQA +L+ LL+ V+ E + +
Sbjct: 157 QDYVACVQELYDVADAFVVNVSSPNTPGLRALQASAELEALLRAVLNETEAQRLRTARRA 216
Query: 100 PPILVKIAPDL-SLDEKKDIADVVLDSVKGIL 130
PP+LVK+APDL D + + + V+G++
Sbjct: 217 PPVLVKLAPDLHPADFEASVQGALNAGVQGLI 248
>gi|395765665|ref|ZP_10446259.1| dihydroorotate dehydrogenase [Bartonella sp. DB5-6]
gi|395411219|gb|EJF77753.1| dihydroorotate dehydrogenase [Bartonella sp. DB5-6]
Length = 391
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D G+ F D+A YF VN+SSPNT +LR LQA+D L L+ + +
Sbjct: 165 INIGANKDTVDKIDDYTAGVAYFYDIADYFTVNISSPNTPSLRDLQARDNLHLLMNEISQ 224
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS E DIA+ + S DGL+VSNTT+ R D+
Sbjct: 225 VRNEQKKKHGFSVPIFLKIAPDLSEKELDDIAEEMKISD--FDGLVVSNTTLSRQGLKDS 282
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST ++++M + ++ IIGVGGV + A EK+KAGA L+Q+
Sbjct: 283 LLSGEEGGLSGSPLFELSTIVLAKMRQKLGKEIAIIGVGGVKDAQTALEKVKAGADLIQL 342
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I + + +Q++G +S+
Sbjct: 343 YSGMVYEGPDLAVTILEGILQFMQQDGIDSI 373
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ G+ F D+A YF VN+SSPNT +LR LQA+D L L+ + + RN+ K PI
Sbjct: 180 YTAGVAYFYDIADYFTVNISSPNTPSLRDLQARDNLHLLMNEISQVRNEQKKKHGFSVPI 239
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDLS E DIA+
Sbjct: 240 FLKIAPDLSEKELDDIAE 257
>gi|254293271|ref|YP_003059294.1| dihydroorotate dehydrogenase [Hirschia baltica ATCC 49814]
gi|254041802|gb|ACT58597.1| dihydroorotate dehydrogenase [Hirschia baltica ATCC 49814]
Length = 362
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 137/214 (64%), Gaps = 11/214 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL----KTVVET 170
+K + D V D +K + ++ Y +N+SSPNT LR LQ K L LL +T++E
Sbjct: 154 EKRVGDYV-DGIKAVWQY---CAYITLNISSPNTPGLRGLQNKSDLSALLTAASETILEM 209
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
++ K P+ +KIAPD+ + +DI D VL +K + GLIVSNTT++R +L +
Sbjct: 210 EDRHKTKR--PVFLKIAPDIDEEAIRDIVDTVLLAK-GMTGLIVSNTTIERPSFLQSENA 266
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
++TGGLSG+PL KST+++ ++ ++ G+L IIG GG+ K A+ KI+AGA Q+Y++
Sbjct: 267 KQTGGLSGKPLFEKSTQVLKQVARIADGQLDIIGAGGIHDAKSAYLKIRAGAHCFQLYSA 326
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
VY G L+ I + L++LL+ +G++ +S+AVGA
Sbjct: 327 LVYEGAALIPEILNGLDQLLEADGFSQLSEAVGA 360
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLDEK 115
Y +N+SSPNT LR LQ K L LL ET ++ K P+ +KIAPD+ +
Sbjct: 173 YITLNISSPNTPGLRGLQNKSDLSALLTAASETILEMEDRHKTKRPVFLKIAPDIDEEAI 232
Query: 116 KDIADVVL 123
+DI D VL
Sbjct: 233 RDIVDTVL 240
>gi|354609644|ref|ZP_09027600.1| Dihydroorotate dehydrogenase [Halobacterium sp. DL1]
gi|353194464|gb|EHB59966.1| Dihydroorotate dehydrogenase [Halobacterium sp. DL1]
Length = 349
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 125/194 (64%), Gaps = 11/194 (5%)
Query: 131 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDL 190
+ D YFVVNVSSPNT LR+LQ ++QL +L + + P+LVK++PDL
Sbjct: 165 RVADAGDYFVVNVSSPNTPGLRELQNREQLAAILDALQDAGAA-------PLLVKLSPDL 217
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELIS 250
+ D D+V ++ +DG++ +NTT +R + L + E GGLSG P+R+++T+ +
Sbjct: 218 HREAVTDAIDLV--NELGLDGIVATNTTTERPDSLRSPNAAEGGGLSGRPIRDRATDQVR 275
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
+ + T P++GVGGVF+ +DA+EKI+AGAS+VQ+YT VY GP + I L +LL
Sbjct: 276 FVAERTD--RPVVGVGGVFTAEDAYEKIRAGASVVQLYTGLVYRGPSVARSINEGLLDLL 333
Query: 311 QKEGYNSVSQAVGA 324
+++G++SV AVGA
Sbjct: 334 ERDGFDSVEDAVGA 347
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ D YFVVNVSSPNT LR+LQ ++QL +L + + P+LVK++PDL
Sbjct: 165 RVADAGDYFVVNVSSPNTPGLRELQNREQLAAILDALQDAGAA-------PLLVKLSPDL 217
Query: 111 SLDEKKDIADVV 122
+ D D+V
Sbjct: 218 HREAVTDAIDLV 229
>gi|322371498|ref|ZP_08046047.1| dihydroorotate dehydrogenase 2 [Haladaptatus paucihalophilus DX253]
gi|320549030|gb|EFW90695.1| dihydroorotate dehydrogenase 2 [Haladaptatus paucihalophilus DX253]
Length = 352
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 124/189 (65%), Gaps = 11/189 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LVK++PDL
Sbjct: 172 ADYFVVNVSSPNTPGLRELQNRENLERILTTLQDAGAS-------PLLVKLSPDLPEPAV 224
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
D D+V++ +DG+I +NT+ +R + L + + E GGLSG P++ ++TE+I +
Sbjct: 225 TDALDLVIE--LGLDGVIATNTSTERPDSLRSENRREEGGLSGIPIQGRATEMIR--FAA 280
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
+ +PI+GVGG+F+ +DA+ KI+AGA +VQ+YT F+Y GP + I L ELL ++GY
Sbjct: 281 ERVDVPIVGVGGIFTAEDAYRKIRAGAHVVQLYTGFIYRGPSIARDINEGLLELLDRDGY 340
Query: 316 NSVSQAVGA 324
+S+ +A+GA
Sbjct: 341 DSIEEAIGA 349
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LVK++PDL
Sbjct: 172 ADYFVVNVSSPNTPGLRELQNRENLERILTTLQDAGAS-------PLLVKLSPDLPEPAV 224
Query: 116 KDIADVVLD 124
D D+V++
Sbjct: 225 TDALDLVIE 233
>gi|448514094|ref|ZP_21616846.1| dihydroorotate dehydrogenase 2 [Halorubrum distributum JCM 9100]
gi|448526390|ref|ZP_21619844.1| dihydroorotate dehydrogenase 2 [Halorubrum distributum JCM 10118]
gi|445692762|gb|ELZ44931.1| dihydroorotate dehydrogenase 2 [Halorubrum distributum JCM 9100]
gi|445699050|gb|ELZ51085.1| dihydroorotate dehydrogenase 2 [Halorubrum distributum JCM 10118]
Length = 351
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 134/232 (57%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V I ++ + + D D + + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPEVPVGI--NIGKSKSTPLEDAPDDYLYTYERVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ L+ +L T+ + P+LVK++PDL D VV D +VDG+
Sbjct: 189 ELQNREALEGILGTLADAGAD-------PLLVKLSPDLPEPAVDDALGVVDD--ARVDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + + E GGLSG+P+ + +TE + Y + +P+IGVGG+
Sbjct: 240 IATNTTTSRPDSLRSHNRAERGGLSGKPIESLATERVR--YVAERTDVPVIGVGGISDAA 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLVQ+YT VY GP L I L ELL+++G++SV AVGA
Sbjct: 298 GAYEKIRAGASLVQLYTGLVYEGPGLARDINEGLVELLERDGFDSVEDAVGA 349
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LV
Sbjct: 161 YLYTYERVADAGDYFVVNVSSPNTPGLRELQNREALEGILGTLADAGAD-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
K++PDL D VV D+ V G++
Sbjct: 214 KLSPDLPEPAVDDALGVVDDARVDGVI 240
>gi|16332087|ref|NP_442815.1| dihydroorotate dehydrogenase 2 [Synechocystis sp. PCC 6803]
gi|383323830|ref|YP_005384684.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383326999|ref|YP_005387853.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383492883|ref|YP_005410560.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384438151|ref|YP_005652876.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803]
gi|451816239|ref|YP_007452691.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803]
gi|2500040|sp|P74782.2|PYRD_SYNY3 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|14595183|dbj|BAA18627.2| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803]
gi|339275184|dbj|BAK51671.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803]
gi|359273150|dbj|BAL30669.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359276320|dbj|BAL33838.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359279490|dbj|BAL37007.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407960273|dbj|BAM53513.1| dihydroorotate dehydrogenase 2 [Bacillus subtilis BEST7613]
gi|451782208|gb|AGF53177.1| dihydroorotate dehydrogenase [Synechocystis sp. PCC 6803]
Length = 381
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 133/230 (57%), Gaps = 14/230 (6%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
P + I +L + + V D V VA YFVVNVSSPNT LR LQ D+L
Sbjct: 150 PRTIPIGINLCKSKITPLDQAVEDYVFSFQTLAPVADYFVVNVSSPNTPGLRSLQESDEL 209
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
+ + Q A P+LVKI+PDLS + I D+V + + G++ +NT+
Sbjct: 210 PRIFAGL-----QSANHWQKPLLVKISPDLSWEAIAVIIDLVKEHN--LSGIVATNTSTR 262
Query: 221 R-------YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKD 273
R ++E GGLSG+P+R+++TE+I +Y+ T G +PIIGVGG+F+ +D
Sbjct: 263 RSGLKTKILPQTGQPIEQEAGGLSGQPIRDRATEVIRYIYQQTGGTIPIIGVGGIFTAED 322
Query: 274 AFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
A+EKI+AGAS +QIYT ++Y GP +V+ I L E L G++ +S+AVG
Sbjct: 323 AWEKIQAGASFLQIYTGWIYGGPWVVSDILQGLGEKLAAGGFSHISEAVG 372
>gi|392565634|gb|EIW58811.1| dihydroorotate dehydrogenase [Trametes versicolor FP-101664 SS1]
Length = 511
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 119/204 (58%), Gaps = 5/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D V G+ FG A VVNVSSPNT LR +Q++ L+ LL V R+++
Sbjct: 230 KSSPPDSIADFVTGVRTFGPYADALVVNVSSPNTPGLRGMQSRSLLQELLAGVTAARDEV 289
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
P IL+KIAPDL+ E DIA VL + VDG+IVSNTTV R + K
Sbjct: 290 TTASAHSRRPKILLKIAPDLTETEVADIAAAVL-ATSGVDGVIVSNTTVRRPTGVSDPNK 348
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL+ + + + L +P+IG GG+ SG DA E +AGAS VQ+YTS
Sbjct: 349 FEQGGLSGPPLKPYALATLRTLRALLPASVPLIGCGGIASGADALEYARAGASAVQLYTS 408
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y GP + ++K EL LL+++G
Sbjct: 409 FGYGGPGVCRQVKDELTALLRQQG 432
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL----ALKPLP 100
++ G+ FG A VVNVSSPNT LR +Q++ L+ LL V R+++ A P
Sbjct: 240 FVTGVRTFGPYADALVVNVSSPNTPGLRGMQSRSLLQELLAGVTAARDEVTTASAHSRRP 299
Query: 101 PILVKIAPDLSLDEKKDIADVVL--DSVKGIL 130
IL+KIAPDL+ E DIA VL V G++
Sbjct: 300 KILLKIAPDLTETEVADIAAAVLATSGVDGVI 331
>gi|347530254|ref|YP_004837002.1| dihydroorotate dehydrogenase [Sphingobium sp. SYK-6]
gi|345138936|dbj|BAK68545.1| dihydroorotate dehydrogenase [Sphingobium sp. SYK-6]
Length = 344
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 126/214 (58%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ A Y VN+SSPNT LR LQ + L LL V+
Sbjct: 134 VNIGANKDSADRIADYEAGVRAMAPHAAYLTVNISSPNTPGLRALQDRGALDALLGRVMA 193
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R PPIL+K+APDL + DIA++ L ++DGLI+SNTT+ R L +R+
Sbjct: 194 ARAGDG----PPILLKVAPDLEPADIDDIAELSL--HHRIDGLIISNTTISRPP-LRSRH 246
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG PL + + E + + + +LP++G GG+ A+ +I+AGASLVQ+Y+
Sbjct: 247 ADEAGGLSGAPLHDLALERLRDFRRRLGDRLPLVGAGGIGDADQAYARIRAGASLVQLYS 306
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ +Y GP L RI L L ++G+ SV+ AVG
Sbjct: 307 ALLYEGPWLPARIGRGLAARLWRDGFASVADAVG 340
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ A Y VN+SSPNT LR LQ + L LL V+ R PPIL+K+A
Sbjct: 152 GVRAMAPHAAYLTVNISSPNTPGLRALQDRGALDALLGRVMAARAGDG----PPILLKVA 207
Query: 108 PDLSLDEKKDIADVVL 123
PDL + DIA++ L
Sbjct: 208 PDLEPADIDDIAELSL 223
>gi|313206992|ref|YP_004046169.1| dihydroorotate dehydrogenase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|383486304|ref|YP_005395216.1| dihydroorotate dehydrogenase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|312446308|gb|ADQ82663.1| dihydroorotate dehydrogenase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|380460989|gb|AFD56673.1| dihydroorotate dehydrogenase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 340
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 119/174 (68%), Gaps = 7/174 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETRNQLAVKPLPPILVKIAPDLSL 192
D YFVVNVSSPNT NLR LQ K+ L LL + +E +N++ KP IL+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRDLQEKEPLTKLLNLLQIENQNKVKRKP---ILLKIAPDLTD 225
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
+ D+ D+V ++ G+I +NTT+ R E + + K E GGLSG+PLR ++TE+I +
Sbjct: 226 SQLLDVIDIVKETNTA--GVIATNTTISR-EGVKSITKNEVGGLSGKPLRERATEVIRFL 282
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + G PIIGVGG+ S +DA EK+KAGASLVQ+YT FVY GP LV +I ++
Sbjct: 283 SEKSGGAFPIIGVGGIHSEEDALEKLKAGASLVQLYTGFVYEGPALVKKINKKI 336
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETRNQLALKPLPPILVKIAPDLSL 112
D YFVVNVSSPNT NLR LQ K+ L LL + +E +N++ K PIL+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRDLQEKEPLTKLLNLLQIENQNKVKRK---PILLKIAPDLTD 225
Query: 113 DEKKDIADVVLDS 125
+ D+ D+V ++
Sbjct: 226 SQLLDVIDIVKET 238
>gi|119513092|ref|ZP_01632146.1| dihydroorotate dehydrogenase [Nodularia spumigena CCY9414]
gi|119462265|gb|EAW43248.1| dihydroorotate dehydrogenase [Nodularia spumigena CCY9414]
Length = 377
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 134/213 (62%), Gaps = 19/213 (8%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L+S + + + GD YFVVNVSSPNT LR LQ L +L + + A KP I
Sbjct: 175 LNSFRLLKELGD---YFVVNVSSPNTPGLRSLQDASMLSAILDLL--HQENPAQKP---I 226
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKC-KVDGLIVSNTTVDRYEYLDARYKE-------ETG 234
VKIAPDL E + IAD++ +K ++ G+I +NTT+ R K+ E G
Sbjct: 227 FVKIAPDL---EWEAIADIIALAKTYQLAGIIATNTTIRRDGLKTQVIKQTGKSPLDEAG 283
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
G+SG P+R++STE+I +++ T+GK+PIIGVGG+F+ +DA+EKI AGASL+Q+YT ++Y
Sbjct: 284 GISGAPVRDRSTEVIRFIWQQTQGKIPIIGVGGIFTPEDAWEKITAGASLIQVYTGWIYQ 343
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
GP +V RI L L+K NS+++AVG K
Sbjct: 344 GPMMVRRILEGLLLYLEKNKLNSITEAVGTCEK 376
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ L +L + + A K PI VKIAPDL
Sbjct: 183 ELGDYFVVNVSSPNTPGLRSLQDASMLSAILDLL--HQENPAQK---PIFVKIAPDL--- 234
Query: 114 EKKDIADVV 122
E + IAD++
Sbjct: 235 EWEAIADII 243
>gi|240850022|ref|YP_002971415.1| dihydroorotate dehydrogenase [Bartonella grahamii as4aup]
gi|240267145|gb|ACS50733.1| dihydroorotate dehydrogenase [Bartonella grahamii as4aup]
Length = 360
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D GI F +VA YF VN+SSPNT LR LQA+D L LL V +
Sbjct: 136 VNIGANKDTVDKIDDYTVGIAHFYNVADYFTVNISSPNTPGLRDLQARDSLHLLLSAVSK 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K PI +KIAPDLS E DIA+ + S +GLIVSNTT+ R ++
Sbjct: 196 ARKEQEKKHGFSIPIFLKIAPDLSEKELDDIAEEIKLSD--FNGLIVSNTTLSRQGLSNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL +ST ++++M + ++ IIGVGGV + A EK+KAGA L+Q+
Sbjct: 254 HLSNEEGGLSGRPLFERSTIVLAKMRQKLGKEIAIIGVGGVKDAQTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ +++Q++G +++
Sbjct: 314 YSGMVYEGPHLAITILQEILQMMQQDGVDNI 344
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ +GI F +VA YF VN+SSPNT LR LQA+D L LL V + R + K PI
Sbjct: 151 YTVGIAHFYNVADYFTVNISSPNTPGLRDLQARDSLHLLLSAVSKARKEQEKKHGFSIPI 210
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDLS E DIA+ +
Sbjct: 211 FLKIAPDLSEKELDDIAEEI 230
>gi|414069394|ref|ZP_11405388.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. Bsw20308]
gi|410808197|gb|EKS14169.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. Bsw20308]
Length = 336
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + LA K P
Sbjct: 154 DYIYCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKSEQLDLAAKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+L+KIAPDL + K +++ +L++K +DG+I +NTT++R + +Y EE GGLSG P+
Sbjct: 214 MLIKIAPDLDQIQIKQVSESLLNNK--IDGVIATNTTLERAAVMGQQYAEEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LT+GKLPIIGVGG+ A EK+ AGA+LVQ+YT F+Y GP LV
Sbjct: 272 RMRSTEVVSELKRLTQGKLPIIGVGGIDDATSAKEKLDAGANLVQVYTGFIYKGPQLVKT 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + LA K P+L+KIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKSEQLDLAAKHNKQVPMLIKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ K +++ +L++ + G++
Sbjct: 226 QIKQVSESLLNNKIDGVI 243
>gi|294013389|ref|YP_003546849.1| dihydroorotate oxidase [Sphingobium japonicum UT26S]
gi|292676719|dbj|BAI98237.1| dihydroorotate oxidase [Sphingobium japonicum UT26S]
Length = 349
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ +A Y VN+SSPNT LR LQ + L LL V+
Sbjct: 140 INIGANKDAADRIADYATGVACMAPLADYLTVNISSPNTPGLRALQDRAALDQLLAAVMA 199
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R PI +K+APDL + +DIA +D + +D LIVSNTT+ R L +
Sbjct: 200 ARGTDRT----PIFLKVAPDLEPADVEDIAAACIDHR--IDALIVSNTTISR-PSLRSPL 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG PL + + + + + K +LP+IGVGG+ + A+ +++AGASL+Q+Y+
Sbjct: 253 AKEAGGLSGAPLHDPALQRLRDFRKALGTRLPLIGVGGIADAEQAYARLRAGASLIQLYS 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP L RI + L+ L+ ++G ++S+ VG
Sbjct: 313 ALVYEGPYLAKRINAGLKALMARDGVKNISEIVG 346
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G + RI +R R+G G TP + + A + + G+ +A Y VN
Sbjct: 114 GGQAAAAERIATR-RRAGSNGQTPVIGINIGANKDAADRIADYATGVACMAPLADYLTVN 172
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ + L LL V+ R PI +K+APDL + +DIA
Sbjct: 173 ISSPNTPGLRALQDRAALDQLLAAVMAARG----TDRTPIFLKVAPDLEPADVEDIAAAC 228
Query: 123 LD 124
+D
Sbjct: 229 ID 230
>gi|374335895|ref|YP_005092582.1| dihydroorotate dehydrogenase 2 [Oceanimonas sp. GK1]
gi|372985582|gb|AEY01832.1| dihydroorotate dehydrogenase 2 [Oceanimonas sp. GK1]
Length = 335
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 118/173 (68%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT +LR LQ D L LL ++ E + QLA K P++VKIAPDL
Sbjct: 165 ASYITVNISSPNTPDLRSLQYGDALDDLLGSLKEKQAQLAEKYHKQVPLVVKIAPDLDEA 224
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E + IAD ++ + ++DG+I +NTT+DR + + +E GGLSG P++NKST++I+E+
Sbjct: 225 EIEQIADSLV--RFRLDGVIATNTTLDRELVFELPHAQEAGGLSGRPVQNKSTQVIAELS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ GKLPIIGVGG+ S A EK+ AGASLVQ+Y+ F+YHGP LV + + L
Sbjct: 283 RRLDGKLPIIGVGGIDSLTAAREKMAAGASLVQVYSGFIYHGPKLVQNLATYL 335
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K + A Y VN+SSPNT +LR LQ D L LL ++ E + QLA K P+
Sbjct: 154 YLICMEKSYEHASYITVNISSPNTPDLRSLQYGDALDDLLGSLKEKQAQLAEKYHKQVPL 213
Query: 103 LVKIAPDLSLDEKKDIAD 120
+VKIAPDL E + IAD
Sbjct: 214 VVKIAPDLDEAEIEQIAD 231
>gi|110681094|ref|YP_684101.1| dihydroorotate dehydrogenase 2 [Roseobacter denitrificans OCh 114]
gi|109457210|gb|ABG33415.1| dihydroorotate oxidase, putative [Roseobacter denitrificans OCh
114]
Length = 350
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 127/213 (59%), Gaps = 18/213 (8%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
S D D A VV+ KG + F VNVSSPNT LR LQ L LL V++
Sbjct: 146 SEDRAADFA-VVMQRFKGHVSFA------TVNVSSPNTEKLRDLQGPAALAALLDGVMQV 198
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R P+ +KIAPDL+L E DIA V VDG+I +NTT+DR + L +K
Sbjct: 199 RGNT------PVFLKIAPDLTLPEISDIATVA--QNAGVDGIIATNTTLDR-DGLHGPHK 249
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+ GGLSG+PL KST +++++ T LP+IGVGGV SG A+ KI+AGA+ VQ+YT
Sbjct: 250 TQAGGLSGQPLFEKSTRVLAQLSAATD--LPLIGVGGVASGAQAYAKIRAGATAVQLYTG 307
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VY G LV I +L +LL+++G+ SV++A G
Sbjct: 308 LVYGGLSLVGDIIRDLGDLLERDGFASVAEACG 340
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+F + VNVSSPNT LR LQ L LL V++ R P+ +KIAPDL
Sbjct: 159 RFKGHVSFATVNVSSPNTEKLRDLQGPAALAALLDGVMQVRGNT------PVFLKIAPDL 212
Query: 111 SLDEKKDIADVVLDS-VKGIL 130
+L E DIA V ++ V GI+
Sbjct: 213 TLPEISDIATVAQNAGVDGII 233
>gi|145298971|ref|YP_001141812.1| dihydroorotate dehydrogenase 2 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418361125|ref|ZP_12961782.1| dihydroorotate dehydrogenase 2 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|166234199|sp|A4SME2.1|PYRD_AERS4 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|142851743|gb|ABO90064.1| dihydroorotate dehydrogenase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356687710|gb|EHI52290.1| dihydroorotate dehydrogenase 2 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 336
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 121/200 (60%), Gaps = 10/200 (5%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
D +++ KD + +D V D A Y VN+SSPNT LR LQ D L LL +
Sbjct: 145 DTPIEQGKDDYLICMDKVY------DHAGYIAVNISSPNTPGLRSLQYGDALDELLAALK 198
Query: 169 ETRNQLAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ +LA K P+ VKIAPDLSLDE +A ++ K +DG+I +NTT+DR D
Sbjct: 199 VRQQELAAQYKKYVPLAVKIAPDLSLDEINQVAASLI--KNGIDGVIATNTTLDREMIYD 256
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ E GGLSG PL++KSTE+I ++ K G LPIIGVGG+ S A EK+ AGASLVQ
Sbjct: 257 MPHAGEAGGLSGRPLQHKSTEVIRQLAKALDGALPIIGVGGIDSAMAAREKLAAGASLVQ 316
Query: 287 IYTSFVYHGPPLVTRIKSEL 306
IY+ F+Y GP LV I + +
Sbjct: 317 IYSGFIYKGPSLVKEIVTHI 336
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ D L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGDALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDLSLDE + A ++ + + G++
Sbjct: 215 AVKIAPDLSLDEINQVAASLIKNGIDGVI 243
>gi|68074653|ref|XP_679243.1| dihydroorotate dehydrogenase, mitochondrial precursor, [Plasmodium
berghei strain ANKA]
gi|56499944|emb|CAH98566.1| dihydroorotate dehydrogenase, mitochondrial precursor, putative
[Plasmodium berghei]
Length = 418
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 153/279 (54%), Gaps = 43/279 (15%)
Query: 65 SPNTANLRKLQAKDQL--KHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+ N N RK Q +D+L KH++ +S+ + K ++V
Sbjct: 162 TENLINFRKKQEEDKLLSKHIV------------------------GVSIGKNKHTENIV 197
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------- 174
D I K A Y +NVSSPNT LR Q ++LK+++ V + N++
Sbjct: 198 DDLKYSIYKIARYADYIAINVSSPNTPGLRDNQESNKLKNIILFVKQEINKIEQIGHNGE 257
Query: 175 -----AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+K P + VK+APDL EKK IA V+LD+ +DG+I+SNTT+++ + +
Sbjct: 258 TFWMNTIKKKPLVFVKLAPDLENSEKKKIAQVLLDTG--IDGMIISNTTINKMDI--KSF 313
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+++ GG+SG+ L++ ST LIS+MY T ++PII GG+ +G DA EKI+AGAS+ Q+Y+
Sbjct: 314 EDKKGGVSGKKLKDLSTNLISDMYIYTNKQIPIIASGGILTGADALEKIEAGASVCQLYS 373
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
V++G +IK E L ++GY ++ +A+G H +
Sbjct: 374 CLVFNGVKSAIQIKREFNNALYQKGYYNLREAIGKKHSN 412
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------A 95
I K A Y +NVSSPNT LR Q ++LK+++ V + N++
Sbjct: 204 IYKIARYADYIAINVSSPNTPGLRDNQESNKLKNIILFVKQEINKIEQIGHNGETFWMNT 263
Query: 96 LKPLPPILVKIAPDLSLDEKKDIADVVLDS 125
+K P + VK+APDL EKK IA V+LD+
Sbjct: 264 IKKKPLVFVKLAPDLENSEKKKIAQVLLDT 293
>gi|399066978|ref|ZP_10748658.1| dihydroorotate dehydrogenase, subfamily 2 [Novosphingobium sp.
AP12]
gi|398027393|gb|EJL20944.1| dihydroorotate dehydrogenase, subfamily 2 [Novosphingobium sp.
AP12]
Length = 352
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 130/217 (59%), Gaps = 8/217 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D +A+Y VN+SSPNT LR LQ + L LL V+E
Sbjct: 139 INIGANKDSNDRVADYAIMARLMAPLANYLAVNISSPNTPGLRALQDESALTGLLDAVIE 198
Query: 170 TRNQLAVKP---LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
R+ A P PP+ +K+APDL + IA + +D + LIVSNTT+ R +
Sbjct: 199 ARD--AACPEGKRPPVFLKVAPDLEPADIDAIARIAIDKG--LGALIVSNTTISRPTLVS 254
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ ETGGLSG PLR+ + + + + K T G +P++GVGG+ + +DA+ +I+AGASLVQ
Sbjct: 255 V-HGGETGGLSGAPLRDLAQQRLRDFRKATGGAVPLVGVGGIATAQDAWARIRAGASLVQ 313
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+Y++ VY GP + I L EL++++G+ S++ AVG
Sbjct: 314 LYSAMVYEGPTIARVICKGLSELMKRDGFASIADAVG 350
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G ++ R+ +R+ + G G N S R+ + + L+ L A+Y VN
Sbjct: 118 GGAQAAVDRLEARLGKPGVLGINIGANK-DSNDRVADYAIMARLMAPL-----ANYLAVN 171
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK-PLPPILVKIAPDLSLDEKKDIADV 121
+SSPNT LR LQ + L LL V+E R+ + PP+ +K+APDL + IA +
Sbjct: 172 ISSPNTPGLRALQDESALTGLLDAVIEARDAACPEGKRPPVFLKVAPDLEPADIDAIARI 231
Query: 122 VLDSVKGILKFGD--VAHYFVVNVSSPNTANLRKLQAKDQLKHLLK 165
+D G L + ++ +V+V T L +D + L+
Sbjct: 232 AIDKGLGALIVSNTTISRPTLVSVHGGETGGLSGAPLRDLAQQRLR 277
>gi|395787288|ref|ZP_10466889.1| dihydroorotate dehydrogenase [Bartonella birtlesii LL-WM9]
gi|395411712|gb|EJF78233.1| dihydroorotate dehydrogenase [Bartonella birtlesii LL-WM9]
Length = 362
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D GI F +A YF VN+SSPNT LR LQA+D L L+ V +
Sbjct: 136 INIGANKDTVNKIDDYTAGIAHFYAIADYFTVNISSPNTPGLRDLQARDSLHLLMNAVSQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN+ K PI +KIAPDLS E DIA+ + S DGLIVSNTT+ R +
Sbjct: 196 ARNKQKKKHGFSTPIFLKIAPDLSEKELDDIAEEMKISD--FDGLIVSNTTLSRKGLNNK 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST ++++M K ++ IIGVGG+ K A EKIKAGA L+Q+
Sbjct: 254 LLSGEDGGLSGRPLFELSTIMLAKMRKKLGKEIVIIGVGGIRDAKTALEKIKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I E+ + +QK+G +++
Sbjct: 314 YSGMVYEGPDLAVTILEEILQFMQKDGIDNI 344
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+ GI F +A YF VN+SSPNT LR LQA+D L L+ V + RN+ K PI
Sbjct: 151 YTAGIAHFYAIADYFTVNISSPNTPGLRDLQARDSLHLLMNAVSQARNKQKKKHGFSTPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDLS E DIA+
Sbjct: 211 FLKIAPDLSEKELDDIAE 228
>gi|159043399|ref|YP_001532193.1| dihydroorotate dehydrogenase 2 [Dinoroseobacter shibae DFL 12]
gi|157911159|gb|ABV92592.1| dihydroorotate oxidase [Dinoroseobacter shibae DFL 12]
Length = 352
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L K AD D + + G + VNVSSPNT LR LQ L+ LL+ V+
Sbjct: 137 LNLGANKTSADRAGDFARVLATCGAHVDFATVNVSSPNTEKLRDLQGAAALRALLEGVMA 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R L V+P+P + +KIAPD+ DIA VV ++ + G+I +NTT+ R + A +
Sbjct: 197 ARAAL-VRPIP-VFLKIAPDMDDAALDDIAGVV--TEAGLHGIIATNTTLARDGLVSA-H 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K E GGLSG PL ST +++ + + T+G +P+IGVGGV S A+ KI+AGAS VQ+YT
Sbjct: 252 KGEAGGLSGAPLFEASTRVLARLSQATEGTVPLIGVGGVDSAGAAYAKIRAGASAVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L I + L+ LL+++G+++V+ AVG
Sbjct: 312 ALVYGGISLAAEIATGLDTLLERDGFSTVADAVG 345
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ L+ LL+ V+ R L ++P+ P+ +KIAPD+ D
Sbjct: 165 FATVNVSSPNTEKLRDLQGAAALRALLEGVMAARAAL-VRPI-PVFLKIAPDMDDAALDD 222
Query: 118 IADVVLDS 125
IA VV ++
Sbjct: 223 IAGVVTEA 230
>gi|434393149|ref|YP_007128096.1| dihydroorotate oxidase A [Gloeocapsa sp. PCC 7428]
gi|428264990|gb|AFZ30936.1| dihydroorotate oxidase A [Gloeocapsa sp. PCC 7428]
Length = 387
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 130/208 (62%), Gaps = 17/208 (8%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L+S + + + GD YFVVNVSSPNT LR LQ +L +L ++ NQ + PI
Sbjct: 183 LESFRLLKELGD---YFVVNVSSPNTPGLRSLQNTTELSSILD-ALQQENQAS----KPI 234
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGG 235
VKIAPDL +E I ++ + K+ G+I +NTT+ R EE GG
Sbjct: 235 CVKIAPDLEWEEIAAIVEIA--QRYKLAGMIATNTTISRDRITTKILAQTGKPVTEEAGG 292
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
+SG P+R+++TE+I +Y+ T+G+LPIIGVGG+F+ +DA+EKI AGASLVQ+YT ++Y G
Sbjct: 293 ISGLPVRDRATEIIRFIYQQTQGQLPIIGVGGIFTAQDAWEKIIAGASLVQVYTGWIYEG 352
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVG 323
P +V+RI L L++ NS+ AVG
Sbjct: 353 PLMVSRILQGLLLKLEEHKLNSIVDAVG 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ +L +L ++ NQ + PI VKIAPDL +
Sbjct: 191 ELGDYFVVNVSSPNTPGLRSLQNTTELSSILD-ALQQENQAS----KPICVKIAPDLEWE 245
Query: 114 EKKDIADV 121
E I ++
Sbjct: 246 EIAAIVEI 253
>gi|45185653|ref|NP_983369.1| ACL035Cp [Ashbya gossypii ATCC 10895]
gi|51701790|sp|Q75CE1.1|PYRD_ASHGO RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOD; Short=DHODase;
Short=DHOdehase; AltName: Full=Dihydroorotate oxidase;
Flags: Precursor
gi|44981408|gb|AAS51193.1| ACL035Cp [Ashbya gossypii ATCC 10895]
gi|374106575|gb|AEY95484.1| FACL035Cp [Ashbya gossypii FDAG1]
Length = 444
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 14/212 (6%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D ++G+ KF +A V+NVSSPNT LR LQ + +L LL +V RN L
Sbjct: 223 KNKNGDEVEDYLRGVEKFQSLADVLVINVSSPNTPGLRDLQQEGRLTELLSMIVAKRNSL 282
Query: 175 --------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL- 225
A PP+LVKIAPDL+ E + IA+ K +DG+IVSNTT+ R + L
Sbjct: 283 INEGNVLGASTHKPPVLVKIAPDLTEPELQSIAEAA--KKSSIDGIIVSNTTIQRPDSLY 340
Query: 226 --DARYKEETGGLSGEPLRNKSTELISEMYKLTKG-KLPIIGVGGVFSGKDAFEKIKAGA 282
D K + GGLSG+P++ + + + +++ TK L ++G GG+ SG+DA E KAGA
Sbjct: 341 TVDEELKNQAGGLSGKPVKPFALKALRTIHQYTKDTNLVLVGCGGISSGQDAIEFAKAGA 400
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
VQ+YT++ Y GP L+ RIK E+ E L+ EG
Sbjct: 401 HFVQLYTAYAYRGPGLIARIKDEVTEELRNEG 432
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--------AL 96
+L G+ KF +A V+NVSSPNT LR LQ + +L LL +V RN L A
Sbjct: 233 YLRGVEKFQSLADVLVINVSSPNTPGLRDLQQEGRLTELLSMIVAKRNSLINEGNVLGAS 292
Query: 97 KPLPPILVKIAPDLSLDEKKDIADVV-LDSVKGIL 130
PP+LVKIAPDL+ E + IA+ S+ GI+
Sbjct: 293 THKPPVLVKIAPDLTEPELQSIAEAAKKSSIDGII 327
>gi|110639085|ref|YP_679294.1| dihydroorotate dehydrogenase 2 [Cytophaga hutchinsonii ATCC 33406]
gi|110281766|gb|ABG59952.1| dihydroorotate dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
Length = 361
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 7/186 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +K + D YFVVNVSSPNT LR LQ K L LL + E NQ +V PIL
Sbjct: 174 DYIKAFNELFDCVDYFVVNVSSPNTPGLRALQEKGPLTELLNRLQEVNNQKSVPK--PIL 231
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE---TGGLSGEP 240
+KIAPDL+ ++ DI +++ ++ K+ G+I +NTT+ R + K E GGLSG+P
Sbjct: 232 LKIAPDLTNEQLDDIVEII--TETKLSGIIATNTTISRDGLTTEKEKVEKIGMGGLSGKP 289
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L +STE+I + K + G +P+IGVGG+ S KDA EK++AGASL+Q+Y+ F+Y GP LV
Sbjct: 290 LTVRSTEVIRYLVKKSNGSIPVIGVGGIHSPKDALEKLEAGASLIQLYSGFIYEGPALVG 349
Query: 301 RIKSEL 306
I E+
Sbjct: 350 AINKEI 355
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 18/116 (15%)
Query: 14 SRVFRSGEWG---CTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTAN 70
SRV G G TP L+ + ++A+ F D YFVVNVSSPNT
Sbjct: 152 SRVLIGGNIGKNKVTPNEEALNDY--IKAFNELF---------DCVDYFVVNVSSPNTPG 200
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKKDIADVVLDS 125
LR LQ K L LL + E NQ K +P PIL+KIAPDL+ ++ DI +++ ++
Sbjct: 201 LRALQEKGPLTELLNRLQEVNNQ---KSVPKPILLKIAPDLTNEQLDDIVEIITET 253
>gi|448393680|ref|ZP_21567739.1| dihydroorotate dehydrogenase 2 [Haloterrigena salina JCM 13891]
gi|445663283|gb|ELZ16035.1| dihydroorotate dehydrogenase 2 [Haloterrigena salina JCM 13891]
Length = 356
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 136/226 (60%), Gaps = 16/226 (7%)
Query: 101 PILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
P+ V I S E++ I D V D + A Y VVNVS PNT + + +
Sbjct: 142 PLGVNIGKMNSSTEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEASPE 195
Query: 159 QLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
L+ + +T+ ET N V P+LVKI PD D D+ D+V + +DG++ +NT+
Sbjct: 196 HLRAIFETL-ETENDENV----PMLVKIGPDEPEDAILDLVDIV--REFGLDGIVATNTS 248
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
R E L++ +EE GGLSG P+ ++ST++I + K T G+LPI+GVGGV S A+EKI
Sbjct: 249 TSR-EGLESPAREEWGGLSGAPIEDRSTDVIRTIAKHTDGELPIVGVGGVDSAASAYEKI 307
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+AGASLVQ+YT FVY GP RI L +LL+++G++SV AVGA
Sbjct: 308 RAGASLVQLYTGFVYQGPSTAERINRGLVDLLERDGFSSVEAAVGA 353
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVS PNT + + + L+ + +T +ET N + P+LVKI PD D
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLRAIFET-LETENDENV----PMLVKIGPDEPEDAI 227
Query: 116 KDIADVV 122
D+ D+V
Sbjct: 228 LDLVDIV 234
>gi|399216468|emb|CCF73156.1| unnamed protein product [Babesia microti strain RI]
Length = 409
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 131/230 (56%), Gaps = 16/230 (6%)
Query: 112 LDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR 171
L K+ V D + K A Y +NVSSPNT NLR Q+ L+ L+ T
Sbjct: 180 LGRNKESTTFVKDLSICVSKVAAYADYIAINVSSPNTKNLRDSQSNQALRELITTAQRIL 239
Query: 172 NQL-------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR--- 221
N+L + P + VKI+PDL+ D+ +DIA V L+ CK+D LIV NTTV R
Sbjct: 240 NELNPDSFCNTYRRKPLLCVKISPDLTDDQIQDIAKVALE--CKLDALIVCNTTVSRPRI 297
Query: 222 --YEYLDARY--KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
E L Y E GGLSG LR+ ST+L+ ++YK T G++PII GG+FSG D K
Sbjct: 298 LVEEKLPGEYTANELPGGLSGLLLRDISTKLVHKVYKYTGGRVPIIASGGIFSGHDVLTK 357
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
I+AGAS QI+T +Y GP +IK +L ++L GY S+S AVG AH+
Sbjct: 358 IEAGASACQIFTGMIYQGPKTANKIKKDLCQILSARGYTSISDAVGRAHR 407
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------ALKPL 99
+ + K A Y +NVSSPNT NLR Q+ L+ L+ T N+L +
Sbjct: 195 ICVSKVAAYADYIAINVSSPNTKNLRDSQSNQALRELITTAQRILNELNPDSFCNTYRRK 254
Query: 100 PPILVKIAPDLSLDEKKDIADVVLDS 125
P + VKI+PDL+ D+ +DIA V L+
Sbjct: 255 PLLCVKISPDLTDDQIQDIAKVALEC 280
>gi|256426178|ref|YP_003126831.1| dihydroorotate dehydrogenase 2 [Chitinophaga pinensis DSM 2588]
gi|256041086|gb|ACU64630.1| dihydroorotate dehydrogenase [Chitinophaga pinensis DSM 2588]
Length = 340
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
DV YFVVNVSSPNT NLR LQ K+ LK LL + +T N KP PIL+KIAPDL+
Sbjct: 168 DVVDYFVVNVSSPNTPNLRALQEKEPLKQLLHHL-QTLNNQKSKP-KPILLKIAPDLTTS 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGLSGEPLRNKSTELIS 250
+ DI ++V ++K + G++ +NTT+DR + E GGLSG P++ K+TE+I
Sbjct: 226 QLDDIIEIVQETK--LAGIVATNTTIDRSNLETPAAEVEAIGAGGLSGLPVKEKATEVIR 283
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
++K T G +PII VGG+F+ DA EK+ AGASLVQ+YT FVY GP +V +I
Sbjct: 284 YIHKNTNGAVPIIAVGGIFTAADAQEKLDAGASLVQVYTGFVYEGPAIVKKI 335
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT NLR LQ K+ LK LL + NQ + KP PIL+KIAPDL+
Sbjct: 168 DVVDYFVVNVSSPNTPNLRALQEKEPLKQLLHHLQTLNNQKS-KP-KPILLKIAPDLTTS 225
Query: 114 EKKDIADVVLDS 125
+ DI ++V ++
Sbjct: 226 QLDDIIEIVQET 237
>gi|392537689|ref|ZP_10284826.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas marina
mano4]
Length = 336
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLISKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + + +Y EE GGLSG P+
Sbjct: 214 MLVKIAPDLDPIQIEQVSESLLNNK--IDGVIATNTTLERSDVIGQQYAEEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LTKG+LPIIGVGG+ A EK+ AGASLVQ+YT F+Y GP LV
Sbjct: 272 RTRSTEVVSELKRLTKGQLPIIGVGGIDDANSAKEKLNAGASLVQVYTGFIYKGPELVKS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLISKHNKQVPMLVKIAPDLDPI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|334345665|ref|YP_004554217.1| dihydroorotate dehydrogenase [Sphingobium chlorophenolicum L-1]
gi|334102287|gb|AEG49711.1| Dihydroorotate dehydrogenase [Sphingobium chlorophenolicum L-1]
Length = 352
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ +A Y VN+SSPNT LR LQ + L LL V+
Sbjct: 143 INIGANKDAADRIADYATGVTCMAPLADYLTVNISSPNTPGLRALQDRAALDQLLGAVMA 202
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R PI +K+APDL + DIA +D + +D LIVSNTT+ R L +
Sbjct: 203 ARGANRT----PIFLKVAPDLEPADVDDIAAACIDHR--IDALIVSNTTISR-PALRSAL 255
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL + + + + + K +LP+IGVGG+ + A+ +I+AGASL+Q Y+
Sbjct: 256 AGEAGGLSGAPLHDPALQRLRDFRKALGTRLPLIGVGGIADAEQAYARIRAGASLIQFYS 315
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP L RI + L+ L+ ++G ++S+ VG
Sbjct: 316 ALVYEGPYLAKRINAGLKRLMARDGVKNISEIVG 349
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ +A Y VN+SSPNT LR LQ + L LL V+ R PI +
Sbjct: 158 YATGVTCMAPLADYLTVNISSPNTPGLRALQDRAALDQLLGAVMAARGANRT----PIFL 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL + DIA +D
Sbjct: 214 KVAPDLEPADVDDIAAACID 233
>gi|359448393|ref|ZP_09237931.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20480]
gi|358045802|dbj|GAA74180.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20480]
Length = 336
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLISKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + + +Y EE GGLSG P+
Sbjct: 214 MLVKIAPDLDPIQIEQVSESLLNNK--IDGVIATNTTLERSDVIGQQYAEEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LTKG+LPIIGVGG+ A EK+ AGASLVQ+YT F+Y GP LV
Sbjct: 272 RTRSTEVVSELKRLTKGQLPIIGVGGIDDANSAKEKLNAGASLVQVYTGFIYKGPELVKS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLISKHNKQVPMLVKIAPDLDPI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|404254903|ref|ZP_10958871.1| dihydroorotate dehydrogenase 2 [Sphingomonas sp. PAMC 26621]
Length = 343
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 122/215 (56%), Gaps = 6/215 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D G+ +A Y VN+SSPNT LR LQ +L LL E
Sbjct: 133 INVGANKDAPDRIADYAHGVAAAAPIADYVTVNISSPNTPGLRDLQHGRELTDLLAAADE 192
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + P + +K+APDL IA ++ VD LIVSNTT+ R + A
Sbjct: 193 ARR---IGDPPRLFLKVAPDLDASAIDAIARAAMEHH--VDALIVSNTTISRPDLRSANA 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E TGGLSG PL + + + K T G +P+I GG+ S ++A+ +I+AGASLVQ+Y+
Sbjct: 248 GE-TGGLSGAPLAPLARARLRDFRKATGGAMPLISAGGIDSAEEAYARIRAGASLVQLYS 306
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ V+HGP L RI L E LQ++G+ SV+ AVGA
Sbjct: 307 ALVFHGPGLAQRILRGLAEALQRDGFASVAAAVGA 341
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ +A Y VN+SSPNT LR LQ +L LL E R + P + +
Sbjct: 148 YAHGVAAAAPIADYVTVNISSPNTPGLRDLQHGRELTDLLAAADEARR---IGDPPRLFL 204
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL IA ++
Sbjct: 205 KVAPDLDASAIDAIARAAME 224
>gi|392551461|ref|ZP_10298598.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas spongiae
UST010723-006]
Length = 336
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 115/173 (66%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL ++ + LA K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGEALDDLLGSLKNEQLDLAAKHGKQVPMLVKIAPDLDQI 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ + +++ ++++K +DG+I +NTT+DR ++ E GGLSG P+R KSTE++ E+
Sbjct: 226 QVQQVSESLINNK--IDGVIATNTTLDRSAVEGMQHANEAGGLSGHPVRQKSTEIVKEIK 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+LT G+LPIIGVGG+ S + A EK AGA LVQ+YT F+Y GPP++ +I S L
Sbjct: 284 RLTNGELPIIGVGGIDSAESAKEKFAAGADLVQVYTGFIYQGPPMIKKIISAL 336
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ + L LL ++ + LA K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGEALDDLLGSLKNEQLDLAAKHGKQVPMLVKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ ++++ + G++
Sbjct: 226 QVQQVSESLINNKIDGVI 243
>gi|395491751|ref|ZP_10423330.1| dihydroorotate dehydrogenase 2 [Sphingomonas sp. PAMC 26617]
Length = 344
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D G+ +A Y VN+SSPNT LR LQ +L LL E
Sbjct: 133 INVGANKDAPDRIADYAHGVAAAAPIADYVTVNISSPNTPGLRDLQHGRELTDLLAAADE 192
Query: 170 TRNQLAVKPLPP-ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R + PP + +K+APDL IA ++ VD LIVSNTT+ R + A
Sbjct: 193 ARR---IGDTPPRLFLKVAPDLDASAIDAIARAAMEHH--VDALIVSNTTISRPDLRSAN 247
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E TGGLSG PL + + + K T G +P+I GG+ S +A+ +I+AGASLVQ+Y
Sbjct: 248 AGE-TGGLSGAPLAPLARARLRDFRKATGGAMPLISAGGIDSADEAYARIRAGASLVQLY 306
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
++ V+HGP L RI L E LQ++G+ SV+ AVGA
Sbjct: 307 SALVFHGPGLAQRILRGLAEALQRDGFASVAAAVGA 342
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ +A Y VN+SSPNT LR LQ +L LL E R ++ P P + +
Sbjct: 148 YAHGVAAAAPIADYVTVNISSPNTPGLRDLQHGRELTDLLAAADEAR-RIGDTP-PRLFL 205
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL IA ++
Sbjct: 206 KVAPDLDASAIDAIARAAME 225
>gi|89070066|ref|ZP_01157396.1| dihydroorotate dehydrogenase, partial [Oceanicola granulosus
HTCC2516]
gi|89044287|gb|EAR50430.1| dihydroorotate dehydrogenase, partial [Oceanicola granulosus
HTCC2516]
Length = 347
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L KD AD D + + G A + VNVSSPNT LR LQ + L LL V E
Sbjct: 137 INLGANKDSADRAADYAAVLTRCGPHADFATVNVSSPNTERLRDLQGRAALAALLARVGE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
LA +PLP IL+KIAPDL D+A+V + ++ GLI +NTT+ R + L +R+
Sbjct: 197 ANAALA-RPLP-ILLKIAPDLDDAALADVAEVA--GEARLAGLIATNTTLAR-DGLASRH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL +ST +++ + L+ LP+IGVGG+ S +DA+ K++AGAS VQ+Y+
Sbjct: 252 AGEAGGLSGRPLFERSTRVLARLSMLSD--LPLIGVGGIGSAEDAYAKVRAGASAVQLYS 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY G L RI L+ LL ++G+ SV +AVG
Sbjct: 310 ALVYEGLGLAGRIAEGLDRLLARDGFGSVREAVG 343
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
+ + G A + VNVSSPNT LR LQ + L LL V E LA +PL PIL+KIAP
Sbjct: 156 LTRCGPHADFATVNVSSPNTERLRDLQGRAALAALLARVGEANAALA-RPL-PILLKIAP 213
Query: 109 DLSLDEKKDIADVV 122
DL D+A+V
Sbjct: 214 DLDDAALADVAEVA 227
>gi|50305303|ref|XP_452611.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52783222|sp|Q6CTX8.1|PYRD2_KLULA RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOD; Short=DHODase;
Short=DHOdehase; AltName: Full=Dihydroorotate oxidase;
Flags: Precursor
gi|49641744|emb|CAH01462.1| KLLA0C09240p [Kluyveromyces lactis]
Length = 445
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 125/211 (59%), Gaps = 14/211 (6%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D +KG+ F A V+NVSSPNT LR LQ + L LL VV R+ L
Sbjct: 224 KNKTGDEVQDYLKGVESFQKYADVLVINVSSPNTPGLRSLQKESILTDLLTQVVAKRDSL 283
Query: 175 --------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL- 225
A PP+LVK+APDL +E K IA+ K KVDG+I+SNTT+ R L
Sbjct: 284 VTSGNALGAKTHKPPVLVKVAPDLVEEEIKSIAEAA--KKSKVDGIIISNTTIQRPTTLI 341
Query: 226 --DARYKEETGGLSGEPLRNKSTELISEMYKLTKGK-LPIIGVGGVFSGKDAFEKIKAGA 282
D+ + GGLSG+PL+ + + + M K TKG L ++G GG+ SG DA E KAGA
Sbjct: 342 TEDSDLVSQAGGLSGKPLKPLALKALKTMAKYTKGSGLVLVGCGGISSGADAIEFAKAGA 401
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
S+V++YT++ Y GP L+ +IK E ELL+KE
Sbjct: 402 SMVELYTAYAYKGPGLIAKIKDETTELLKKE 432
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL------- 94
+Q +L G+ F A V+NVSSPNT LR LQ + L LL VV R+ L
Sbjct: 231 VQDYLKGVESFQKYADVLVINVSSPNTPGLRSLQKESILTDLLTQVVAKRDSLVTSGNAL 290
Query: 95 -ALKPLPPILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
A PP+LVK+APDL +E K IA+ S V GI+
Sbjct: 291 GAKTHKPPVLVKVAPDLVEEEIKSIAEAAKKSKVDGII 328
>gi|156742406|ref|YP_001432535.1| dihydroorotate oxidase [Roseiflexus castenholzii DSM 13941]
gi|189038446|sp|A7NLW9.1|PYRD_ROSCS RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|156233734|gb|ABU58517.1| Dihydroorotate oxidase [Roseiflexus castenholzii DSM 13941]
Length = 367
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPP 181
V D + +A Y VN+SSPNT LR+L + L+ LL+ ++ + L + P P
Sbjct: 158 VEDYAATFVALAPLADYVAVNISSPNTPGLRRLHERAALEELLRELMRLNHGL-LYPRP- 215
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
I +KI+PD +LD+ +++ V + V I +NTT+ R E L +R ETGGLSG PL
Sbjct: 216 IALKISPDETLDQIEEV--VRAGCEAGVAAFIATNTTLAR-EGLRSRLANETGGLSGRPL 272
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
++ ++I +Y+LT+G P+IGVGGV + DA+ I+AGA LVQ+YT VY GP +
Sbjct: 273 APRARQVIRAIYRLTRGTPPVIGVGGVLTADDAYAHIRAGARLVQLYTGMVYAGPAIARE 332
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
IK L +LL+++G+ SV+QA G
Sbjct: 333 IKRGLAQLLRRDGFVSVTQATG 354
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+A Y VN+SSPNT LR+L + L+ LL+ ++ + L L P PI +KI+PD +LD+
Sbjct: 171 LADYVAVNISSPNTPGLRRLHERAALEELLRELMRLNHGL-LYPR-PIALKISPDETLDQ 228
Query: 115 KKDI 118
+++
Sbjct: 229 IEEV 232
>gi|359461127|ref|ZP_09249690.1| dihydroorotate oxidase [Acaryochloris sp. CCMEE 5410]
Length = 382
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 139/216 (64%), Gaps = 19/216 (8%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
++ +AD V S + + +GD YFVVNVSSPNT LR LQA +QL +L + Q
Sbjct: 169 EQAVADYV-GSFQLLKTYGD---YFVVNVSSPNTPGLRSLQAVEQLAPILAGL-----QA 219
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVDGLIVSNTTVDR---YEYLDARYK 230
P+LVKIAPDL E +DIA +V L ++ G+I +NTT+ R E + A
Sbjct: 220 ENTEGKPLLVKIAPDL---EWEDIAAIVELAQAHQLAGIIATNTTIRRDLKTERIAATGN 276
Query: 231 ---EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
EE GG+SG P+R++ST++I +++ T+G+LPIIGVGG+F+ +DA+EK+ AGASL+Q+
Sbjct: 277 APIEEAGGISGAPVRSRSTDVIRFIHQHTQGQLPIIGVGGIFTAEDAWEKLCAGASLLQV 336
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
YT ++Y GP +V RI L +Q+EG +S+ VG
Sbjct: 337 YTGWIYEGPWMVRRILEGLLVKMQEEGIQQLSEIVG 372
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
+GD YFVVNVSSPNT LR LQA +QL +L + + P+LVKIAPDL
Sbjct: 185 YGD---YFVVNVSSPNTPGLRSLQAVEQLAPILAGLQAENTEGK-----PLLVKIAPDL- 235
Query: 112 LDEKKDIADVV 122
E +DIA +V
Sbjct: 236 --EWEDIAAIV 244
>gi|359452175|ref|ZP_09241530.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20495]
gi|358050769|dbj|GAA77779.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20495]
Length = 336
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + LA K P
Sbjct: 154 DYIYCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKSEQLDLAAKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + +Y EE GGLSG P+
Sbjct: 214 MLVKIAPDLDQIQIEQVSESLLNNK--IDGVIATNTTLERAAVMGQQYAEEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LT+GKLPIIGVGG+ A EK+ AGA+LVQ+YT F+Y GP LV
Sbjct: 272 RMRSTEVVSELKRLTQGKLPIIGVGGIDDATSAKEKLDAGANLVQVYTGFIYKGPQLVKT 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + LA K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKSEQLDLAAKHNKQVPMLVKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|397773135|ref|YP_006540681.1| dihydroorotate dehydrogenase [Natrinema sp. J7-2]
gi|397682228|gb|AFO56605.1| dihydroorotate dehydrogenase [Natrinema sp. J7-2]
Length = 356
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 154/282 (54%), Gaps = 19/282 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPLP--PIL 103
G ++ G V Y P LR+ +A +++ + + +++L P P+
Sbjct: 85 FGFVEIGTVTPYPQAGNDRPRLFRLREDEAMINRMGFNGQGMERVKSRLEADGTPDIPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V + S E++ I D V D + A Y VVNVS PNT + + + L+
Sbjct: 145 VNVGKMNSSSEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEGSPEHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E N V PILVKI PD + D+ D+V + +DG++ +NT+ R
Sbjct: 199 TIFETL-EAENDRNV----PILVKIGPDEPAESVFDLVDIV--QEFDLDGIVATNTSTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
+ L + +EE GGLSG+PL ++ST +I + T G LPIIGVGGV S + A+EKI+AG
Sbjct: 252 -DGLASPRREEWGGLSGKPLADRSTAVIRSLADYTDGDLPIIGVGGVDSAESAYEKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
ASLVQ+YT FVY GP TRI L LL+++G++SV AVG
Sbjct: 311 ASLVQLYTGFVYQGPSTATRINRGLAALLERDGFSSVEDAVG 352
>gi|390166723|ref|ZP_10218980.1| dihydroorotate dehydrogenase 2 [Sphingobium indicum B90A]
gi|389590439|gb|EIM68430.1| dihydroorotate dehydrogenase 2 [Sphingobium indicum B90A]
Length = 349
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ +A Y VN+SSPNT LR LQ + L LL V+
Sbjct: 140 INIGANKDAADRIADYATGVACMAPLADYLTVNISSPNTPGLRALQDRAALDQLLGAVMA 199
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R PI +K+APDL + +DIA +D + +D LIVSNTT+ R L +
Sbjct: 200 ARGTDRT----PIFLKVAPDLEPADVEDIAAACIDHR--IDALIVSNTTISR-PSLRSPL 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL + + + + + K +LP+IGVGG+ + A+ +++AGASL+Q+Y+
Sbjct: 253 AGEAGGLSGAPLHDPALQRLRDFRKALGTRLPLIGVGGIADAEQAYARLRAGASLIQLYS 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP L RI + L+ L+ ++G ++S+ VG
Sbjct: 313 ALVYEGPYLAKRINAGLKALMARDGVKNISEIVG 346
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G + RI +R R+G G TP + + A + + G+ +A Y VN
Sbjct: 114 GGQAAAAERIATR-RRAGSNGQTPVIGINIGANKDAADRIADYATGVACMAPLADYLTVN 172
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQ + L LL V+ R PI +K+APDL + +DIA
Sbjct: 173 ISSPNTPGLRALQDRAALDQLLGAVMAARG----TDRTPIFLKVAPDLEPADVEDIAAAC 228
Query: 123 LD 124
+D
Sbjct: 229 ID 230
>gi|16124783|ref|NP_419347.1| dihydroorotate dehydrogenase 2 [Caulobacter crescentus CB15]
gi|221233499|ref|YP_002515935.1| dihydroorotate dehydrogenase 2 [Caulobacter crescentus NA1000]
gi|13421713|gb|AAK22515.1| dihydroorotate dehydrogenase [Caulobacter crescentus CB15]
gi|220962671|gb|ACL94027.1| dihydroorotate dehydrogenase [Caulobacter crescentus NA1000]
Length = 352
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ KD D + D V G+ + ++ YF N+SSPNT LR LQ K L+ LL + ET
Sbjct: 138 NIGANKDATDRIQDYVTGLTRLWGLSDYFTANISSPNTPGLRALQTKAALEELLGRLAET 197
Query: 171 RNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R L V PI +K+APDL E + I + V+ + +D +IVSNTT+ R E L +R
Sbjct: 198 RAALKVASGADYPIFLKVAPDLEDGEVEAIVETVVGAG--LDAIIVSNTTIARPETLKSR 255
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+ E+GGLSG PL ST +++ + G++ +IG GGV G A+ KI+AGA VQ+Y
Sbjct: 256 FAGESGGLSGAPLLEASTAVLARFHAAAAGRVALIGAGGVADGAGAYAKIRAGARAVQLY 315
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
++ VY GP LVTRIK +L L+ +G+ +V A+GAA
Sbjct: 316 SALVYGGPGLVTRIKRDLAARLRADGFAAVEDAIGAA 352
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP- 100
+Q ++ G+ + ++ YF N+SSPNT LR LQ K L+ LL + ETR L +
Sbjct: 149 IQDYVTGLTRLWGLSDYFTANISSPNTPGLRALQTKAALEELLGRLAETRAALKVASGAD 208
Query: 101 -PILVKIAPDLSLDEKKDIADVVLDS 125
PI +K+APDL E + I + V+ +
Sbjct: 209 YPIFLKVAPDLEDGEVEAIVETVVGA 234
>gi|374596827|ref|ZP_09669831.1| Dihydroorotate dehydrogenase [Gillisia limnaea DSM 15749]
gi|373871466|gb|EHQ03464.1| Dihydroorotate dehydrogenase [Gillisia limnaea DSM 15749]
Length = 340
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 119/175 (68%), Gaps = 5/175 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
+ YFVVNVSSPNT NLR+LQ K L LL T+ ++RN + +K PIL+KIAPDLS
Sbjct: 168 EFVDYFVVNVSSPNTPNLRELQDKKPLTDLLNTL-QSRN-MQMKVQKPILLKIAPDLSDS 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI D++ + + G+I +NTT+ R E L + + E GGLSG+PL+N+STE+I +
Sbjct: 226 QLLDIIDII--KETGIAGVIATNTTISR-EGLKSDNQNEIGGLSGKPLKNRSTEVIKFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
+ + PIIGVGG+ S +DA EK+ AGASLVQ+YT F+Y GP L+ I ++ E
Sbjct: 283 EKSDKAFPIIGVGGIHSAEDALEKLNAGASLVQLYTGFIYEGPGLIKEINKKILE 337
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
+ YFVVNVSSPNT NLR+LQ K L LL T +++RN + +K PIL+KIAPDLS
Sbjct: 168 EFVDYFVVNVSSPNTPNLRELQDKKPLTDLLNT-LQSRN-MQMKVQKPILLKIAPDLSDS 225
Query: 114 EKKDIADVVLDS 125
+ DI D++ ++
Sbjct: 226 QLLDIIDIIKET 237
>gi|338534217|ref|YP_004667551.1| dihydroorotate dehydrogenase 2 [Myxococcus fulvus HW-1]
gi|337260313|gb|AEI66473.1| dihydroorotate dehydrogenase 2 [Myxococcus fulvus HW-1]
Length = 363
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 12/222 (5%)
Query: 110 LSLDEKKD--IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + V D V + + Y VVN SSPNT LRKLQ +QL LL V
Sbjct: 144 VNIGKNKDTPLEQAVEDYVACVDALAPLGDYVVVNASSPNTPGLRKLQEPEQLSQLLSAV 203
Query: 168 VETRNQLA-VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-YEYL 225
E +LA V P P+ +KIAPDL+ + ++ DV ++ GLI +NTT+ R +E+
Sbjct: 204 QE---RLATVAPGKPLFLKIAPDLAPEAVDEVVDVA--RAQQLAGLIATNTTLARPFEHP 258
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
A+ E GGLSG P+R + +I Y G LPIIGVGGVF+ +D +EK++AGAS+V
Sbjct: 259 LAK---EAGGLSGAPVREPANAVIRRAYLRGGGALPIIGVGGVFTAQDVYEKLRAGASVV 315
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Q+YT F+Y GP +V + L LL ++G+ V +A+GA H+
Sbjct: 316 QVYTGFIYEGPGMVGSLLPALATLLARDGFKQVREAIGAEHR 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y VVN SSPNT LRKLQ +QL LL V E +A P P+ +KIAPDL+ + +
Sbjct: 174 YVVVNASSPNTPGLRKLQEPEQLSQLLSAVQERLATVA--PGKPLFLKIAPDLAPEAVDE 231
Query: 118 IADVV 122
+ DV
Sbjct: 232 VVDVA 236
>gi|254580101|ref|XP_002496036.1| ZYRO0C08998p [Zygosaccharomyces rouxii]
gi|238938927|emb|CAR27103.1| ZYRO0C08998p [Zygosaccharomyces rouxii]
Length = 438
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 14/211 (6%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D D +KG+ KF +A V+NVSSPNT LR LQA+ +L LL +V R+ L
Sbjct: 217 KNKTGDEFADYLKGVEKFQSLADALVINVSSPNTPGLRDLQAESKLTTLLSQIVTKRDSL 276
Query: 175 AVKP--------LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL- 225
+ PPILVKIAPDL+ + K + + +S+ +DG++VSNTT+ R + L
Sbjct: 277 VGQGNALGQNSHKPPILVKIAPDLNDEALKSVVESAKNSQ--IDGIVVSNTTIQRPDTLI 334
Query: 226 --DARYKEETGGLSGEPLRNKSTELISEMYKLTKG-KLPIIGVGGVFSGKDAFEKIKAGA 282
+ K +TGGLSG+PL+ S + + + K KG L ++G GG+ +GKDA E KAGA
Sbjct: 335 TQNESLKNQTGGLSGKPLKPLSLKALKNVAKYAKGSNLVLVGCGGISTGKDALEFGKAGA 394
Query: 283 SLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
S VQ+YT++ Y GP LV +IK EL + L+KE
Sbjct: 395 SFVQLYTAYAYRGPGLVAKIKDELADELKKE 425
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP------ 98
+L G+ KF +A V+NVSSPNT LR LQA+ +L LL +V R+ L +
Sbjct: 227 YLKGVEKFQSLADALVINVSSPNTPGLRDLQAESKLTTLLSQIVTKRDSLVGQGNALGQN 286
Query: 99 --LPPILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
PPILVKIAPDL+ + K + + +S + GI+
Sbjct: 287 SHKPPILVKIAPDLNDEALKSVVESAKNSQIDGIV 321
>gi|168203403|gb|ACA21538.1| dihydroorotate dehydrogenase [Candidatus Pelagibacter ubique]
Length = 352
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 130/214 (60%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + + + +NVSSPNT LR LQ K L L+ V+
Sbjct: 137 LNLGANKDSHDRADDFGRVLRHCAAHLDFATINVSSPNTEKLRDLQGKAALSALIAGVMH 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L KP+P I +KIAPDL +D+A+VVL + +D +I +NTT+DR L+ +
Sbjct: 197 IRDDLK-KPIP-IFLKIAPDLDTASLEDVAEVVLLNG--IDAVIATNTTLDR-NGLNGPH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K++ GGLSG PL KST +++++ L K+P+IGVGGV A+EKI AGAS VQ+YT
Sbjct: 252 KDQKGGLSGAPLFEKSTRILAQLSNLLGEKIPLIGVGGVSDALHAYEKILAGASAVQLYT 311
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ Y G LV + LE LL+K G++S+ QAVG
Sbjct: 312 ALAYQGLSLVPNLNEGLEALLEKNGFSSIDQAVG 345
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ +NVSSPNT LR LQ K L L+ V+ R+ L KP+ PI +KIAPDL +D
Sbjct: 165 FATINVSSPNTEKLRDLQGKAALSALIAGVMHIRDDLK-KPI-PIFLKIAPDLDTASLED 222
Query: 118 IADVVL 123
+A+VVL
Sbjct: 223 VAEVVL 228
>gi|255534212|ref|YP_003094583.1| dihydroorotate dehydrogenase 2 [Flavobacteriaceae bacterium
3519-10]
gi|255340408|gb|ACU06521.1| Dihydroorotate dehydrogenase [Flavobacteriaceae bacterium 3519-10]
Length = 335
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V D V K YFVVNVSSPNT NLR+LQ K+ L LL T+ + +Q KP
Sbjct: 150 DAVNDYVMCFEKLFPFVDYFVVNVSSPNTPNLRELQEKEPLTKLLGTLQQLNSQ-KEKPR 208
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGE 239
P IL+KIAPDLS D+ DI D+V + + G+I +NTT+ R E L + + ETGGLSG+
Sbjct: 209 P-ILLKIAPDLSDDQLLDIIDIV--KETHIAGVIATNTTLSR-ENLVSEDRNETGGLSGK 264
Query: 240 PLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
PL +STE+I + + + PIIGVGG+ S DA EK+ AGASL+Q+YT F+Y GP L+
Sbjct: 265 PLTERSTEVIRFLSEKSGKAFPIIGVGGIHSADDALEKLDAGASLLQLYTGFIYEGPQLI 324
Query: 300 TRIKSEL 306
I L
Sbjct: 325 REINERL 331
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+++ K YFVVNVSSPNT NLR+LQ K+ L LL T+ + +Q KP PIL+
Sbjct: 155 YVMCFEKLFPFVDYFVVNVSSPNTPNLRELQEKEPLTKLLGTLQQLNSQKE-KPR-PILL 212
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDLS D+ DI D+V ++ + G++
Sbjct: 213 KIAPDLSDDQLLDIIDIVKETHIAGVI 239
>gi|255531172|ref|YP_003091544.1| dihydroorotate dehydrogenase 2 [Pedobacter heparinus DSM 2366]
gi|255344156|gb|ACU03482.1| dihydroorotate dehydrogenase [Pedobacter heparinus DSM 2366]
Length = 344
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 121/188 (64%), Gaps = 5/188 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V D VK + DV YFVVNVSSPNT LR LQ K+ L +LL T+ + + +
Sbjct: 158 DAVSDYVKCFDRLFDVVDYFVVNVSSPNTPGLRALQEKEPLMNLLNTLQQRNQKDGISR- 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLDARYKEETGGLSG 238
PIL+KIAPDL+ ++ DI ++V+ + + G+I +NTT+DR Y + E GGLSG
Sbjct: 217 -PILLKIAPDLTNEQLDDIVEIVMHTG--IAGVIATNTTIDRNGLYTAEKVTNEAGGLSG 273
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+PL +STE+I + + PIIGVGG+ S +DA +K++AGASLVQ+YT F+Y GP +
Sbjct: 274 KPLTIRSTEVIKYLSDKSNKAFPIIGVGGIHSPQDAKDKLEAGASLVQLYTGFIYEGPAI 333
Query: 299 VTRIKSEL 306
V RI EL
Sbjct: 334 VKRICKEL 341
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT LR LQ K+ L +LL T+ + + + PIL+KIAPDL+ +
Sbjct: 172 DVVDYFVVNVSSPNTPGLRALQEKEPLMNLLNTLQQRNQKDGIS--RPILLKIAPDLTNE 229
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V+ + + G++
Sbjct: 230 QLDDIVEIVMHTGIAGVI 247
>gi|378824800|ref|YP_005187532.1| dihydroorotate dehydrogenase 2 [Sinorhizobium fredii HH103]
gi|365177852|emb|CCE94707.1| dihydroorotate dehydrogenase 2 [Sinorhizobium fredii HH103]
Length = 488
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D V GI F VA YF N+SSPNT LR LQA++ L LL V+
Sbjct: 264 VNIGANKDSADRIADYVAGIRTFYAVARYFTANISSPNTPGLRDLQARESLAALLSAVLA 323
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K P+ +KIAPDL+ DIA VL +DGLIVSNTT+ R D
Sbjct: 324 ARDEEVGKGGRRVPVFLKIAPDLTEAGMDDIAAEVLAHN--LDGLIVSNTTLAREGLRDQ 381
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG+PL KST +++ M K +PIIGVGGV S + A EKI+AGA LVQ+
Sbjct: 382 RQAKEAGGLSGKPLFEKSTAVLARMRKRLGPNVPIIGVGGVSSAETAAEKIRAGADLVQL 441
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
Y+ VY GP L RI L L ++ ++ +
Sbjct: 442 YSCMVYEGPGLPGRIVRGLSGLCDRDKLTTIRE 474
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F VA YF N+SSPNT LR LQA++ L LL V+ R++ K P+
Sbjct: 279 YVAGIRTFYAVARYFTANISSPNTPGLRDLQARESLAALLSAVLAARDEEVGKGGRRVPV 338
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL+ DIA VL
Sbjct: 339 FLKIAPDLTEAGMDDIAAEVL 359
>gi|429750358|ref|ZP_19283410.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429165428|gb|EKY07483.1| dihydroorotate oxidase [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 338
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 119/173 (68%), Gaps = 5/173 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ L+ LL T+ + +N KP PIL+KIAPDL+ +
Sbjct: 168 DYVDYFVVNVSSPNTPNLRTLQEKEPLQQLLSTL-QHKNHEHPKP-KPILLKIAPDLTDE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI ++V ++ + G+I +NTT+ R + L + + ETGGLSG+PL+ ++TE+I +
Sbjct: 226 QLLDIIEIVQNTH--IAGVIATNTTIGR-QGLHSPAQNETGGLSGKPLKQRATEVIRFLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + PIIGVGG+FS +DA EK+ AGASLVQ+YT F+Y G LV RI L
Sbjct: 283 EKSNKAFPIIGVGGIFSEEDAIEKLNAGASLVQLYTGFIYEGAGLVKRINKRL 335
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L+ + D YFVVNVSSPNT NLR LQ K+ L+ LL T ++ +N KP PIL+
Sbjct: 159 YLICFEQLFDYVDYFVVNVSSPNTPNLRTLQEKEPLQQLLST-LQHKNHEHPKP-KPILL 216
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KIAPDL+ ++ DI ++V ++ + G++
Sbjct: 217 KIAPDLTDEQLLDIIEIVQNTHIAGVI 243
>gi|452205887|ref|YP_007486009.1| dihydroorotate dehydrogenase (quinone) [Natronomonas moolapensis
8.8.11]
gi|452081987|emb|CCQ35238.1| dihydroorotate dehydrogenase (quinone) [Natronomonas moolapensis
8.8.11]
Length = 349
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 122/190 (64%), Gaps = 11/190 (5%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
YFVVNVSSPNT LR+LQ +D+L+ +L T LA P+LVK++PDL+
Sbjct: 169 AGEYFVVNVSSPNTPGLRELQQRDRLESILGT-------LADAGADPLLVKLSPDLTEAA 221
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYK 254
+D VV D +DG+I +NTT R +L + +ETGGLSG+P+ ++ST+LI + +
Sbjct: 222 VEDALGVVED--LDLDGVIATNTTTGRPPWLRGEHADETGGLSGKPIEDESTQLIRFIAE 279
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
T+ P++GVGGV + A+EKI+AGASLVQ+YT VY GP + I L E L+++G
Sbjct: 280 RTE--KPVVGVGGVTDAEGAYEKIRAGASLVQLYTGLVYEGPSIARDINRGLLERLERDG 337
Query: 315 YNSVSQAVGA 324
+S+ AVGA
Sbjct: 338 IDSIEDAVGA 347
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
YFVVNVSSPNT LR+LQ +D+L+ +L T LA P+LVK++PDL+
Sbjct: 169 AGEYFVVNVSSPNTPGLRELQQRDRLESILGT-------LADAGADPLLVKLSPDLTEAA 221
Query: 115 KKDIADVVLD 124
+D VV D
Sbjct: 222 VEDALGVVED 231
>gi|340776410|ref|ZP_08696353.1| dihydroorotate dehydrogenase 2 [Acetobacter aceti NBRC 14818]
Length = 357
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 118/187 (63%), Gaps = 7/187 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
Y V+N+SSPNT LR LQ ++L LL + + PP+L+K+APDL+ +E
Sbjct: 176 YVVLNLSSPNTPGLRSLQGAERLTGLLAAISAVHEER-----PPLLIKLAPDLAEEEIGP 230
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I + + VDGLI+SNTT+ R L +R+ E GGLSG PLR ++ ++ E+ +L
Sbjct: 231 IVEAAV--AGGVDGLIISNTTLARPATLRSRFAGEAGGLSGRPLRERALTMLREVARLVN 288
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNS 317
G+L +IG GG+ +G D ++I+AGA LVQ+Y++F Y GP LV R+K E+ +++++G S
Sbjct: 289 GRLALIGCGGIETGADVVDRIRAGADLVQVYSAFAYDGPALVGRLKHEVLGIMREQGVES 348
Query: 318 VSQAVGA 324
+ GA
Sbjct: 349 IGDLKGA 355
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
Y V+N+SSPNT LR LQ ++L LL + + PP+L+K+APDL+ +E
Sbjct: 176 YVVLNLSSPNTPGLRSLQGAERLTGLLAAISAVHEE-----RPPLLIKLAPDLAEEEIGP 230
Query: 118 IAD-VVLDSVKGIL 130
I + V V G++
Sbjct: 231 IVEAAVAGGVDGLI 244
>gi|254570172|ref|XP_002492196.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031993|emb|CAY69916.1| Hypothetical protein PAS_chr2-2_0021 [Komagataella pastoris GS115]
gi|328351316|emb|CCA37715.1| dihydroorotate oxidase [Komagataella pastoris CBS 7435]
Length = 433
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ- 173
K D V D VKGI + G A V+NVSSPNT LR LQA +L LL+ VV R++
Sbjct: 216 KNKTGDEVEDYVKGIQRLGPYADVLVINVSSPNTPGLRDLQAGSKLTSLLERVVSERDKV 275
Query: 174 ---LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR---YEYLDA 227
L K P+LVKIAPDL+ +E KDIA ++DG++VSNTT+ R Y +
Sbjct: 276 NSALDNKSKAPVLVKIAPDLTEEEIKDIATSA--KNARIDGIVVSNTTISRPTTYVSPND 333
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+E+GGLSG PL+ S + + + K TK L ++G GG+ SGKDA + KAGA+ V+
Sbjct: 334 PILQESGGLSGRPLKPLSLKALRYLRKYTKDSNLVLVGCGGIASGKDAIDFAKAGATFVE 393
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEG 314
+YT+F Y GP L +IK E+ + L+KEG
Sbjct: 394 LYTAFAYRGPSLPYKIKQEITQELKKEG 421
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLP 100
++ GI + G A V+NVSSPNT LR LQA +L LL+ VV R++ L K
Sbjct: 226 YVKGIQRLGPYADVLVINVSSPNTPGLRDLQAGSKLTSLLERVVSERDKVNSALDNKSKA 285
Query: 101 PILVKIAPDLSLDEKKDIA 119
P+LVKIAPDL+ +E KDIA
Sbjct: 286 PVLVKIAPDLTEEEIKDIA 304
>gi|398384054|ref|ZP_10542108.1| dihydroorotate dehydrogenase, subfamily 2 [Sphingobium sp. AP49]
gi|397723562|gb|EJK84055.1| dihydroorotate dehydrogenase, subfamily 2 [Sphingobium sp. AP49]
Length = 350
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 119/200 (59%), Gaps = 7/200 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D G+ +A Y VN+SSPNT LR LQ + L LL V+ R PPI
Sbjct: 155 DYATGVTCMAPLADYLTVNISSPNTPGLRALQGRAALDDLLSAVMAARPAGG----PPIF 210
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+K+APDL + +DIA +D + +D LIVSNTT+ R L + + ETGGLSG PL +
Sbjct: 211 LKVAPDLEPADIEDIAAACIDHR--IDALIVSNTTITR-PALQSPHAGETGGLSGAPLTD 267
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
S I + +L +LP+IGVGG+ + + A+ +I+AGASLVQ+Y++ VY GP L RI
Sbjct: 268 LSLGKIRDFRRLLGDRLPLIGVGGIANAQQAYARIRAGASLVQVYSALVYEGPYLARRIN 327
Query: 304 SELEELLQKEGYNSVSQAVG 323
+ L+ L+ ++G + + VG
Sbjct: 328 AGLKGLMARDGVRHIGEVVG 347
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ +A Y VN+SSPNT LR LQ + L LL V+ R PPI +
Sbjct: 156 YATGVTCMAPLADYLTVNISSPNTPGLRALQGRAALDDLLSAVMAARPAGG----PPIFL 211
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL + +DIA +D
Sbjct: 212 KVAPDLEPADIEDIAAACID 231
>gi|381203116|ref|ZP_09910224.1| dihydroorotate dehydrogenase 2 [Sphingobium yanoikuyae XLDN2-5]
Length = 350
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 7/200 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D G+ +A Y VN+SSPNT LR LQ + L LL V+ R + PPI
Sbjct: 155 DYATGVTCMAPLADYLTVNISSPNTPGLRALQGRAALDDLLGAVMAARPEGG----PPIF 210
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+K+APDL + +DIA +D + +D LIVSNTT+ R L + + ETGGLSG PL +
Sbjct: 211 LKVAPDLEPADVEDIAAACIDHR--IDALIVSNTTITR-PALRSAHAGETGGLSGAPLTD 267
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
S + + +L +LP+IGVGG+ + + A+ +I+AGASLVQ+Y++ VY GP L RI
Sbjct: 268 LSLNRLRDFRRLLGDRLPLIGVGGIANAEQAYARIRAGASLVQVYSALVYEGPYLARRIN 327
Query: 304 SELEELLQKEGYNSVSQAVG 323
L+ L+ ++G + + VG
Sbjct: 328 DGLKALMARDGVRHIGEVVG 347
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ +A Y VN+SSPNT LR LQ + L LL V+ R + PPI +
Sbjct: 156 YATGVTCMAPLADYLTVNISSPNTPGLRALQGRAALDDLLGAVMAARPEGG----PPIFL 211
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL + +DIA +D
Sbjct: 212 KVAPDLEPADVEDIAAACID 231
>gi|359435553|ref|ZP_09225748.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20652]
gi|357917778|dbj|GAA61997.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20652]
Length = 336
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D V + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYVHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLIAKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + +Y EE GGLSG P+
Sbjct: 214 MLVKIAPDLDQIQIEQVSESLLNNK--IDGVIATNTTLERAAVIGQQYAEEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LT+GKLPIIGVGG+ + A EK+ AGA+LVQ+YT F+Y GP LV
Sbjct: 272 RMRSTEVVSELKRLTQGKLPIIGVGGIDDAQSAKEKLDAGANLVQVYTGFIYKGPQLVRS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLIAKHNKQVPMLVKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|332535065|ref|ZP_08410877.1| dihydroorotate dehydrogenase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035488|gb|EGI71984.1| dihydroorotate dehydrogenase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 336
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLVAKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + +Y EE GGLSG P+
Sbjct: 214 MLVKIAPDLDQIQIEQVSESLLNNK--IDGVIATNTTLERAAVMGQQYAEEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LT+GKLPIIGVGG+ + A EK AGA+LVQ+YT F+Y GP LV
Sbjct: 272 RMRSTEVVSELKRLTQGKLPIIGVGGIDDAQSAKEKFDAGANLVQVYTGFIYKGPQLVKS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLVAKHNKQVPMLVKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|451940252|ref|YP_007460890.1| dihydroorotate oxidase [Bartonella australis Aust/NH1]
gi|451899639|gb|AGF74102.1| dihydroorotate oxidase [Bartonella australis Aust/NH1]
Length = 363
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 6/213 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D GI +F DVA YF VN+SSPNT LR LQA+D L+ L+ + +
Sbjct: 136 VNIGANKDTVNKIDDYTAGIARFYDVADYFTVNISSPNTPGLRDLQARDNLRLLMSAISQ 195
Query: 170 TRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K L PI +KIAPDL+ E DIA+ + S DG+IV NTT+ R + +
Sbjct: 196 ARREQKKKYGALVPIFLKIAPDLTEQELDDIAEEMKLSD--FDGVIVCNTTLSRQDLKSS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEM-YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E GGLSG PL ST ++++M +KL K + IIGVGGV + A EKIKAGA LVQ
Sbjct: 254 TLIREEGGLSGRPLFKLSTIVLAKMRHKLGK-DIAIIGVGGVRDAQTALEKIKAGADLVQ 312
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
+Y+ VY GP L I + +L++K+G ++
Sbjct: 313 LYSGMVYEGPDLAVTIMKGVLQLMEKDGVGTIQ 345
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+ GI +F DVA YF VN+SSPNT LR LQA+D L+ L+ + + R + K L PI
Sbjct: 151 YTAGIARFYDVADYFTVNISSPNTPGLRDLQARDNLRLLMSAISQARREQKKKYGALVPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDL+ E DIA+
Sbjct: 211 FLKIAPDLTEQELDDIAE 228
>gi|374985116|ref|YP_004960611.1| dihydroorotate dehydrogenase 2 [Streptomyces bingchenggensis BCW-1]
gi|297155768|gb|ADI05480.1| dihydroorotate dehydrogenase 2 [Streptomyces bingchenggensis BCW-1]
Length = 384
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 5/213 (2%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D V + A Y VVNVSSPNT LR LQA DQL+ LL V E ++
Sbjct: 159 AEAVADYVTSTERLAGHADYLVVNVSSPNTPGLRNLQAVDQLRPLLSAVREAADRTVPGR 218
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE---ETGG 235
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R A E ETGG
Sbjct: 219 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIARDGLGLASGPELTAETGG 276
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PLR +S E++ +Y G++ ++GVGG+ + DA+E+I AGA+LVQ Y+ F+Y G
Sbjct: 277 LSGAPLRARSLEVLRRLYARVGGRITLVGVGGIETADDAWERILAGATLVQGYSGFIYAG 336
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
P RI L L Y +++ A+GA ++
Sbjct: 337 PFWSRRIHRGLAARLAASPYATLADAIGAEARA 369
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA DQL+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 176 ADYLVVNVSSPNTPGLRNLQAVDQLRPLLSAVREAADRTVPGRRVPLLVKIAPDLADEDV 235
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 236 DAVADLAVELGLDGII 251
>gi|83314719|ref|XP_730482.1| dihydroorotate dehydrogenase [Plasmodium yoelii yoelii 17XNL]
gi|23490218|gb|EAA22047.1| dihydroorotate dehydrogenase, putative [Plasmodium yoelii yoelii]
Length = 512
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 140/233 (60%), Gaps = 19/233 (8%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+S+ + K ++V D I K A Y +NVSSPNT LR Q ++LK+++ V +
Sbjct: 279 VSIGKNKYTENIVDDLKYSIYKIARYADYIAINVSSPNTPGLRDNQESNKLKNIILFVKQ 338
Query: 170 TRNQL-------------AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
N++ K P + VK+APDL EKK IA V+LD+ +DG+I+SN
Sbjct: 339 EINKIEESGHNGENFWMNTTKKKPLVFVKLAPDLENSEKKKIAQVLLDTG--IDGMIISN 396
Query: 217 TTVDRYEYLDAR-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
TT+++ +D + ++++ GG+SG+ L++ ST LIS+MY T ++PII GG+ +G DA
Sbjct: 397 TTINK---MDIKSFEDKKGGVSGKKLKDLSTNLISDMYIYTNKQIPIIASGGILTGADAL 453
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHKS 328
EKI+AGAS+ Q+Y+ V++G +IK E L ++GY ++ +A+G H +
Sbjct: 454 EKIEAGASVCQLYSCLVFNGVKSAIQIKREFNNALYQKGYYNLREAIGKKHNN 506
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------A 95
I K A Y +NVSSPNT LR Q ++LK+++ V + N++
Sbjct: 298 IYKIARYADYIAINVSSPNTPGLRDNQESNKLKNIILFVKQEINKIEESGHNGENFWMNT 357
Query: 96 LKPLPPILVKIAPDLSLDEKKDIADVVLDS 125
K P + VK+APDL EKK IA V+LD+
Sbjct: 358 TKKKPLVFVKLAPDLENSEKKKIAQVLLDT 387
>gi|448300961|ref|ZP_21490958.1| dihydroorotate dehydrogenase 2 [Natronorubrum tibetense GA33]
gi|445584951|gb|ELY39256.1| dihydroorotate dehydrogenase 2 [Natronorubrum tibetense GA33]
Length = 356
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 33/291 (11%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLR----KLQAKDQLKHLLK------TVVETRNQLAL 96
G ++ G V Y P + N R +LQ + + + + V++R +
Sbjct: 85 FGFVEIGTVTPY-------PQSGNDRPRLFRLQEDEAMVNRMGFNGQGMERVKSRLETDG 137
Query: 97 KPLPPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKL 154
P P+ V I S +E++ I D V D + A Y VVNVS PNT +
Sbjct: 138 TPGFPLGVNIGKMNSSNEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDE 191
Query: 155 QAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIV 214
+ D L+ + +T+ E N V P+LVKI PD + D+ D++ + +DG++
Sbjct: 192 ASPDHLREIFETL-EAENDADV----PMLVKIGPDEPEESVLDLVDII--QEFDLDGIVA 244
Query: 215 SNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDA 274
+NT+ R E L++ +EE GGLSG PL+++ST++I + + T G LPI+GVGGV S A
Sbjct: 245 TNTSTSR-EGLESPNREEWGGLSGNPLQDRSTDVIRTIAEYTDGNLPIVGVGGVDSPGSA 303
Query: 275 FEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
+EKI AGASLVQ+YT FVY GP RI L +LL+++G+ SV AVGA
Sbjct: 304 YEKILAGASLVQLYTGFVYEGPATAKRINQGLVQLLERDGFASVEDAVGAG 354
>gi|119470099|ref|ZP_01612865.1| dihydro-orotate oxidase, FMN-linked [Alteromonadales bacterium
TW-7]
gi|119446520|gb|EAW27794.1| dihydro-orotate oxidase, FMN-linked [Alteromonadales bacterium
TW-7]
Length = 336
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLISKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + + +Y +E GGLSG P+
Sbjct: 214 MLVKIAPDLDPIQIEQVSESLLNNK--IDGVIATNTTLERSDVIGQQYADEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LTKG+LPIIGVGG+ A EK+ AGASLVQ+YT F+Y GP LV
Sbjct: 272 RTRSTEVVSELKRLTKGQLPIIGVGGIDDANSAKEKLNAGASLVQVYTGFIYKGPELVKS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLISKHNKQVPMLVKIAPDLDPI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|319942239|ref|ZP_08016554.1| dihydroorotate dehydrogenase [Sutterella wadsworthensis 3_1_45B]
gi|319804112|gb|EFW01012.1| dihydroorotate dehydrogenase [Sutterella wadsworthensis 3_1_45B]
Length = 351
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 115/186 (61%), Gaps = 5/186 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
I + + D K + K D A Y VN+SSPNT NLR+LQ K +L HL++ +V+ R +L
Sbjct: 153 IENALSDYEKCLDKVYDAADYIAVNISSPNTKNLRQLQGKGELDHLVEGIVKKREELKAA 212
Query: 178 ---PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG 234
PI VKIAPDL DE D ++ + +DG+I +NTT+ R + ETG
Sbjct: 213 RNGKHVPIAVKIAPDLENDEILRCVDTLIANG--IDGVICTNTTIGRKGVEGLDHANETG 270
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PLR +STE++ + KG +PII GGV +G DA EKI+AGA LVQ++T F+Y+
Sbjct: 271 GLSGAPLRERSTEVVRLVADHVKGAIPIIASGGVMTGADAVEKIEAGAQLVQLFTGFIYN 330
Query: 295 GPPLVT 300
GP LV
Sbjct: 331 GPKLVA 336
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 15/115 (13%)
Query: 20 GEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 79
G+ TP N LS + + + K D A Y VN+SSPNT NLR+LQ K +
Sbjct: 146 GKNAVTPIENALSDYEKC-----------LDKVYDAADYIAVNISSPNTKNLRQLQGKGE 194
Query: 80 LKHLLKTVVETRNQLALK---PLPPILVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
L HL++ +V+ R +L PI VKIAPDL DE D ++ + + G++
Sbjct: 195 LDHLVEGIVKKREELKAARNGKHVPIAVKIAPDLENDEILRCVDTLIANGIDGVI 249
>gi|381187798|ref|ZP_09895360.1| dihydroorotate dehydrogenase [Flavobacterium frigoris PS1]
gi|379649586|gb|EIA08159.1| dihydroorotate dehydrogenase [Flavobacterium frigoris PS1]
Length = 297
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 120/179 (67%), Gaps = 7/179 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-LPPILVKIAPDLSL 192
D YFVVNVSSPNT NLR LQ K+ L LL+T+ +N+ KP PIL+KIAPDL+
Sbjct: 125 DYVDYFVVNVSSPNTPNLRALQDKEPLTQLLQTL---QNKNLAKPKQKPILLKIAPDLTD 181
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
++ DI ++V + ++ G+I +NTT+ R E L + K E GGLSG+PL +STE+I +
Sbjct: 182 EQLLDIIEIV--KETQIAGVIATNTTISR-EGLQSDNKTEMGGLSGKPLTKRSTEVIRFL 238
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
+ + PIIGVGG+ S +DA EK+ AGASLVQ+YT F+Y GP LV I ++ E L+
Sbjct: 239 SEKSNKAFPIIGVGGIHSAEDAIEKLDAGASLVQLYTGFIYEGPALVKAINKKILERLK 297
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K+ L LL+T ++ +N LA PIL+KIAPDL+ +
Sbjct: 125 DYVDYFVVNVSSPNTPNLRALQDKEPLTQLLQT-LQNKN-LAKPKQKPILLKIAPDLTDE 182
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V ++ + G++
Sbjct: 183 QLLDIIEIVKETQIAGVI 200
>gi|409435953|ref|ZP_11263157.1| dihydro-orotate oxidase, FMN-linked [Rhizobium mesoamericanum
STM3625]
gi|408752262|emb|CCM74304.1| dihydro-orotate oxidase, FMN-linked [Rhizobium mesoamericanum
STM3625]
Length = 362
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V GI +F VA YF N+SSPNT LR LQA+ L LL V+
Sbjct: 138 VNIGANKDSEDRIGDYVLGIRRFYSVARYFTANISSPNTPGLRDLQARKSLAALLSAVLA 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R+ A K P+ +KIAPDL+ DIA L +DGLIVSNTT+ R D
Sbjct: 198 ARDAEAEKAGRKIPVFLKIAPDLTEGGLDDIAAEALSHA--LDGLIVSNTTLSREGLRDH 255
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R +E GGLSG+PL KST ++++M K LPI+GVGGV S + A EKIKAGA LVQ+
Sbjct: 256 RQAKEAGGLSGKPLFEKSTAVLAKMRKRVGPSLPIVGVGGVSSAETALEKIKAGADLVQL 315
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I L +LL +E S+
Sbjct: 316 YSCMVYEGPGLPGTIIRGLSKLLDREQVKSI 346
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
++LGI +F VA YF N+SSPNT LR LQA+ L LL V+ R+ A K P+
Sbjct: 153 YVLGIRRFYSVARYFTANISSPNTPGLRDLQARKSLAALLSAVLAARDAEAEKAGRKIPV 212
Query: 103 LVKIAPDLSLDEKKDIA 119
+KIAPDL+ DIA
Sbjct: 213 FLKIAPDLTEGGLDDIA 229
>gi|339502048|ref|YP_004689468.1| dihydroorotate dehydrogenase PyrD [Roseobacter litoralis Och 149]
gi|338756041|gb|AEI92505.1| dihydroorotate dehydrogenase PyrD [Roseobacter litoralis Och 149]
Length = 350
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 11/214 (5%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K D D + +F + VNVSSPNT LR LQ L LL+ V++
Sbjct: 138 INLGANKTSEDRAADFAVVMQRFKAHVSFATVNVSSPNTEKLRDLQGPAALAALLEGVMD 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + P+ +KIAPDL+L E +DIA V VD +I +NTT+DR + L +
Sbjct: 198 VRGDI------PVFLKIAPDLTLPEIRDIATVA--QNAGVDAIIATNTTLDR-DGLHGPH 248
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
K + GGLSG+PL KST +++++ T LP+IGVGGV SG A+ KI+AGA+ VQ+YT
Sbjct: 249 KTQAGGLSGQPLFEKSTRVLAQLSAATT--LPLIGVGGVASGAQAYAKIRAGATAVQLYT 306
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VY G LV I +L++LL ++G+ SV++A G
Sbjct: 307 GLVYGGLSLVGDIVRDLDDLLARDGFASVAEACG 340
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ L LL+ V++ R + P+ +KIAPDL+L E +D
Sbjct: 166 FATVNVSSPNTEKLRDLQGPAALAALLEGVMDVRGDI------PVFLKIAPDLTLPEIRD 219
Query: 118 IADVVLDS 125
IA V ++
Sbjct: 220 IATVAQNA 227
>gi|194903807|ref|XP_001980942.1| GG16516 [Drosophila erecta]
gi|190652645|gb|EDV49900.1| GG16516 [Drosophila erecta]
Length = 139
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 97/132 (73%)
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
KDI V+ K VDGLIVSNTTV R + + EETGGLSG PL+ +STE+I++MY+L
Sbjct: 2 KDIVWVIKRKKSSVDGLIVSNTTVSRENIGNNKLAEETGGLSGPPLKARSTEMIAQMYQL 61
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T GK+PIIGVGGV SG DA+EKI+AGAS +QIYTS VY GP LV IK+EL L+ + G+
Sbjct: 62 TDGKIPIIGVGGVASGYDAYEKIEAGASYIQIYTSLVYEGPALVDDIKAELSALITRLGH 121
Query: 316 NSVSQAVGAAHK 327
N+V+ VG K
Sbjct: 122 NNVADVVGTNSK 133
>gi|148260954|ref|YP_001235081.1| dihydroorotate dehydrogenase 2 [Acidiphilium cryptum JF-5]
gi|146402635|gb|ABQ31162.1| dihydroorotate oxidase A [Acidiphilium cryptum JF-5]
Length = 354
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 125/213 (58%), Gaps = 7/213 (3%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L K+ AD + D + A Y +NVSSPNT LR LQA D+L +L +
Sbjct: 138 NLGINKEGADPLADYPALVAAVAPHADYVAINVSSPNTPGLRDLQAADRLAAILDAI--- 194
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
+ AV PP+ VK+APDL ++ D+ + V GLIVSNTT+ R E L +
Sbjct: 195 --RAAVPNAPPLFVKLAPDLDEAALPELVDMAIGRA--VAGLIVSNTTLARPESLRGAAR 250
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL N+ST +++ + L +L +IGVGGV + + A K +AGASLVQ+YT+
Sbjct: 251 GEAGGLSGAPLFNRSTRMLARVRLLAGDRLLLIGVGGVATPEQALAKFRAGASLVQVYTA 310
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
FVY GP L+ R+ + L LL + G ++++ VG
Sbjct: 311 FVYQGPSLLPRLAAGLSALLDQYGAATLAELVG 343
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +NVSSPNT LR LQA D+L +L + + A+ PP+ VK+APDL
Sbjct: 163 ADYVAINVSSPNTPGLRDLQAADRLAAILDAI-----RAAVPNAPPLFVKLAPDLDEAAL 217
Query: 116 KDIADVVLD-SVKGIL 130
++ D+ + +V G++
Sbjct: 218 PELVDMAIGRAVAGLI 233
>gi|392309194|ref|ZP_10271728.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas citrea NCIMB
1889]
Length = 336
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D + + K + A Y VN+SSPNT LR LQ D L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGDALDDLLESLKSEQMDLIAKHNKSVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPD+ + IA+ + +K ++DG+I +NTT++R +Y EE GGLSG P+
Sbjct: 214 MLVKIAPDIDAVQVAQIAESL--TKNRIDGVIATNTTLERTAVQGMQYAEEAGGLSGRPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R KST ++ E+ ++T+GKLPIIGVGG+ S + A EK+ AGA L+Q+YT F+Y GP LV R
Sbjct: 272 REKSTFVVDELRRITEGKLPIIGVGGIDSAESAKEKLSAGADLIQVYTGFIYEGPGLVKR 331
Query: 302 I 302
I
Sbjct: 332 I 332
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ D L LL+++ + L K P+LVKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGDALDDLLESLKSEQMDLIAKHNKSVPMLVKIAPDIDAV 225
Query: 114 EKKDIAD 120
+ IA+
Sbjct: 226 QVAQIAE 232
>gi|124024988|ref|YP_001014104.1| dihydroorotate dehydrogenase 2 [Prochlorococcus marinus str.
NATL1A]
gi|123960056|gb|ABM74839.1| Dihydroorotate dehydrogenase [Prochlorococcus marinus str. NATL1A]
Length = 385
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 126/196 (64%), Gaps = 14/196 (7%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y V+NVSSPNT LR LQ Q+K L+ T+ + N PP+LVKIAPDLS +
Sbjct: 193 LSDYAVINVSSPNTPGLRSLQGTKQIKKLIITLKDLPN------CPPLLVKIAPDLSNEA 246
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK------EETGGLSGEPLRNKSTEL 248
+IA V +++ +DG+I NT++DR++ + + K +E GGLSG PL+ + E+
Sbjct: 247 IDEIARVAMENG--IDGIIAINTSLDRFDLKNLKIKTGNTLGQENGGLSGLPLQKRGLEV 304
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I + + T LP+IGVGG+ S + A+E+I AGASLVQIYT +++ GP LV I L +
Sbjct: 305 IRRLRRSTDNDLPLIGVGGIHSARAAWERITAGASLVQIYTGWIFEGPNLVPDILDGLIQ 364
Query: 309 LLQKEGYNSVSQAVGA 324
++K G+ ++ +A+G+
Sbjct: 365 QMEKHGFRNIKEAIGS 380
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y V+NVSSPNT LR LQ Q+K L+ T+ + N PP+LVKIAPDLS +
Sbjct: 193 LSDYAVINVSSPNTPGLRSLQGTKQIKKLIITLKDLPN------CPPLLVKIAPDLSNEA 246
Query: 115 KKDIADVVLDS-VKGIL 130
+IA V +++ + GI+
Sbjct: 247 IDEIARVAMENGIDGII 263
>gi|392395756|ref|YP_006432357.1| dihydroorotate oxidase A [Flexibacter litoralis DSM 6794]
gi|390526834|gb|AFM02564.1| dihydroorotate oxidase A [Flexibacter litoralis DSM 6794]
Length = 345
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 118/176 (67%), Gaps = 7/176 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR+LQ K L LL+T+ + RNQ P P+L+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRELQEKKPLTELLQTL-QNRNQEHQNP-KPLLLKIAPDLTNS 226
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE---TGGLSGEPLRNKSTELIS 250
+ DI ++ + K+ G+I +NTT+ R K E GGLSG+PL+N+STE+I+
Sbjct: 227 QLDDIIEIA--KETKLAGIIATNTTISRENLKTESQKVEMIGNGGLSGKPLKNRSTEVIA 284
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+++ + PIIGVGG+ S KDA EK++AGA+L+Q+YT F+Y G L+++I E+
Sbjct: 285 YLHQKSNAAFPIIGVGGIHSPKDALEKLEAGAALIQLYTGFIYEGWELISKINKEI 340
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR+LQ K L LL+T ++ RNQ P P+L+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRELQEKKPLTELLQT-LQNRNQEHQNP-KPLLLKIAPDLTNS 226
Query: 114 EKKDIADVVLDS 125
+ DI ++ ++
Sbjct: 227 QLDDIIEIAKET 238
>gi|395784624|ref|ZP_10464451.1| dihydroorotate dehydrogenase [Bartonella melophagi K-2C]
gi|395422198|gb|EJF88409.1| dihydroorotate dehydrogenase [Bartonella melophagi K-2C]
Length = 363
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + + D + GI F DVA YF +N+SSPNT LR LQ + L L+K V +
Sbjct: 136 INIGANKDTVNKIDDYIAGITCFYDVADYFTINISSPNTPGLRDLQVRSNLSLLMKAVSQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R + K PI +KIAPDL+ E DIA+ + S DGLIVSNTT+ R ++
Sbjct: 196 ARYEKEEKHGVSVPIFLKIAPDLTEQELDDIAEEMKLSD--FDGLIVSNTTLSRQGLKNS 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST ++++M K + IIGVGGV + A EKIKAGA LVQ+
Sbjct: 254 TLISEEGGLSGRPLFEHSTVVLAKMRKRLGKDIAIIGVGGVRDAQTALEKIKAGADLVQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I ++ +++Q++G +++
Sbjct: 314 YSGMVYEGPELAVTIMRDVLQIMQQDGVDTI 344
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
++ GI F DVA YF +N+SSPNT LR LQ + L L+K V + R + K PI
Sbjct: 151 YIAGITCFYDVADYFTINISSPNTPGLRDLQVRSNLSLLMKAVSQARYEKEEKHGVSVPI 210
Query: 103 LVKIAPDLSLDEKKDIAD 120
+KIAPDL+ E DIA+
Sbjct: 211 FLKIAPDLTEQELDDIAE 228
>gi|390953085|ref|YP_006416843.1| dihydroorotate oxidase A [Aequorivita sublithincola DSM 14238]
gi|390419071|gb|AFL79828.1| dihydroorotate oxidase A [Aequorivita sublithincola DSM 14238]
Length = 351
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 113/169 (66%), Gaps = 5/169 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K L LL+T+ N + PIL+KIAPDL+ +
Sbjct: 173 DYVDYFVVNVSSPNTPNLRDLQEKKPLTDLLQTLQNLNNSKEKRK--PILLKIAPDLTDE 230
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DI ++V K+DG+I +NTT+ R E + + K+ETGGLSG+PL ++TE+I +
Sbjct: 231 QLLDIIEIV--GTTKIDGVIATNTTISR-EGITSENKKETGGLSGKPLNKRTTEVIRFLS 287
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ + PIIGVGG+ S +DA EK+ AGASLVQ+YT F+Y GP L+ I
Sbjct: 288 EKSNKAFPIIGVGGIHSAEDALEKLDAGASLVQLYTGFIYEGPGLIKDI 336
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K L LL+T+ N + PIL+KIAPDL+ +
Sbjct: 173 DYVDYFVVNVSSPNTPNLRDLQEKKPLTDLLQTLQNLNNSKEKR--KPILLKIAPDLTDE 230
Query: 114 EKKDIADVV 122
+ DI ++V
Sbjct: 231 QLLDIIEIV 239
>gi|448362629|ref|ZP_21551234.1| dihydroorotate dehydrogenase 2 [Natrialba asiatica DSM 12278]
gi|445647842|gb|ELZ00810.1| dihydroorotate dehydrogenase 2 [Natrialba asiatica DSM 12278]
Length = 356
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 151/287 (52%), Gaps = 27/287 (9%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQA-------KDQLKHLLKTVVETRNQLALKPL 99
G ++ G V Y P LR+ +A Q +K+ +ET P
Sbjct: 85 FGFVEIGTVTPYSQGGNDRPRLFRLREDEAMVNRMGFNGQGMERVKSRLETDG----APD 140
Query: 100 PPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAK 157
P+ V I S E++ + D V D + A Y VVNVS PNT + +
Sbjct: 141 FPLGVNIGKMNSSTEREAVEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEASP 194
Query: 158 DQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNT 217
D L+ + +T+ E N V PILVK+ PD + ++ D+V +DG++ +NT
Sbjct: 195 DHLREIFETL-EAENDADV----PILVKVGPDEPAESILELVDIV--RAFDLDGIVATNT 247
Query: 218 TVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
+ DR E L + +EE GGLSG+PL +ST +I + + T G LPIIGVGGV S A+ K
Sbjct: 248 STDR-ENLASPRREEWGGLSGKPLEERSTAVIRTIAEHTDGDLPIIGVGGVDSAASAYRK 306
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
I+AGASLVQ+YT FVY GP RI L LL+++G+ SV++AVGA
Sbjct: 307 IRAGASLVQLYTGFVYRGPSTAKRINRGLVNLLERDGFASVAEAVGA 353
>gi|72383402|ref|YP_292757.1| dihydroorotate dehydrogenase 2 [Prochlorococcus marinus str.
NATL2A]
gi|72003252|gb|AAZ59054.1| dihydroorotate oxidase A [Prochlorococcus marinus str. NATL2A]
Length = 385
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 126/196 (64%), Gaps = 14/196 (7%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
++ Y V+NVSSPNT LR LQ Q+K L+ T+ + N PP+LVKIAPDLS +
Sbjct: 193 LSDYAVINVSSPNTPGLRSLQGTKQIKKLISTLKDLPN------CPPLLVKIAPDLSNEA 246
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK------EETGGLSGEPLRNKSTEL 248
+IA V +++ +DG+I NT++DR++ + + K +E GGLSG PL+ + ++
Sbjct: 247 IDEIARVAMENG--IDGIIAINTSLDRFDLKNLKIKTGNTLGQENGGLSGLPLQKRGLDV 304
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
I + + T LP+IGVGG+ S + A+E+I AGASLVQIYT +++ GP LV I L +
Sbjct: 305 IRRLRRSTDNDLPLIGVGGIHSARAAWERITAGASLVQIYTGWIFEGPNLVPDILDGLIQ 364
Query: 309 LLQKEGYNSVSQAVGA 324
++K G+ ++ +A+G+
Sbjct: 365 QMEKHGFRNIKEAIGS 380
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
++ Y V+NVSSPNT LR LQ Q+K L+ T+ + N PP+LVKIAPDLS +
Sbjct: 193 LSDYAVINVSSPNTPGLRSLQGTKQIKKLISTLKDLPN------CPPLLVKIAPDLSNEA 246
Query: 115 KKDIADVVLDS-VKGIL 130
+IA V +++ + GI+
Sbjct: 247 IDEIARVAMENGIDGII 263
>gi|448483121|ref|ZP_21605668.1| dihydroorotate dehydrogenase 2 [Halorubrum arcis JCM 13916]
gi|445821022|gb|EMA70823.1| dihydroorotate dehydrogenase 2 [Halorubrum arcis JCM 13916]
Length = 351
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V I ++ + + D D + + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPEVPVGI--NIGKSKSTPLEDAPDDYLYTYERVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ L+ +L T+ + P+LVK++PDL D VV D +DG+
Sbjct: 189 ELQNREALEGILGTLADAGAD-------PLLVKLSPDLPEPAVDDALGVVDD--LDLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + + E GGLSG+P+ + +TE + Y + +P+IGVGGV
Sbjct: 240 IATNTTTSRPDSLRSHNRAERGGLSGKPIESLATERVR--YVAERTDVPVIGVGGVSDAA 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLVQ+YT VY GP L I L ELL+++G++SV AVGA
Sbjct: 298 GAYEKIRAGASLVQLYTGLVYEGPGLARDINEGLVELLERDGFDSVEDAVGA 349
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LV
Sbjct: 161 YLYTYERVADAGDYFVVNVSSPNTPGLRELQNREALEGILGTLADAGAD-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++PDL D VV D
Sbjct: 214 KLSPDLPEPAVDDALGVVDD 233
>gi|150025867|ref|YP_001296693.1| dihydroorotate dehydrogenase 2 [Flavobacterium psychrophilum
JIP02/86]
gi|189038421|sp|A6H0L5.1|PYRD_FLAPJ RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|149772408|emb|CAL43888.1| Dihydroorotate oxidase [Flavobacterium psychrophilum JIP02/86]
Length = 350
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 115/181 (63%), Gaps = 11/181 (6%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE--------TRNQLAVKPLPPILVK 185
D YFVVNVSSPNT NLR+LQ K+ L LL T+ TR+ PIL+K
Sbjct: 168 DYVDYFVVNVSSPNTPNLRELQEKEPLTQLLNTLQNKNQNKQKQTRDGAQSSGAKPILLK 227
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKS 245
IAPDL+ ++ DI D+V K+ G+I +NTT+ R E L + + E GGLSG+PL N+S
Sbjct: 228 IAPDLTNEQLLDIIDIV--KTTKIAGIIATNTTISR-EGLQSINRIEMGGLSGKPLTNRS 284
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
TE+I + + + PIIGVGG+ +DA EK++AGASL+Q+YT F+Y GP LV I E
Sbjct: 285 TEVIRFLSQKSNKAFPIIGVGGIHCVQDAIEKLEAGASLIQLYTGFIYEGPALVKAINKE 344
Query: 306 L 306
+
Sbjct: 345 I 345
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV--------VETRNQLALKPLPPILVK 105
D YFVVNVSSPNT NLR+LQ K+ L LL T+ +TR+ PIL+K
Sbjct: 168 DYVDYFVVNVSSPNTPNLRELQEKEPLTQLLNTLQNKNQNKQKQTRDGAQSSGAKPILLK 227
Query: 106 IAPDLSLDEKKDIADVV 122
IAPDL+ ++ DI D+V
Sbjct: 228 IAPDLTNEQLLDIIDIV 244
>gi|88608290|ref|YP_506074.1| dihydroorotate dehydrogenase [Neorickettsia sennetsu str. Miyayama]
gi|88600459|gb|ABD45927.1| dihydroorotate dehydrogenase [Neorickettsia sennetsu str. Miyayama]
Length = 348
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 134/225 (59%), Gaps = 13/225 (5%)
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKD 158
LPP+ V I + ++ V D + VA Y +N+SSPNT +LR +Q +
Sbjct: 134 LPPLGVNIGKNAV------SSNAVSDYARLAAYVSSVADYITLNISSPNTVSLRDMQKVE 187
Query: 159 QLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTT 218
L+ LL V + AV I +K+APDL+ E ++ + L K KV G+IVSNTT
Sbjct: 188 ILEELLIAV-----KAAVGSNVRIFIKVAPDLA--EGAEVGIISLALKHKVAGIIVSNTT 240
Query: 219 VDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKI 278
+ E L +++K E GGLSG PL ST L+ +MY+ T G+L IG GG+ + A+ KI
Sbjct: 241 IGCRESLHSKHKVEYGGLSGTPLFKLSTGLLRKMYRCTNGELVFIGCGGISDAETAYAKI 300
Query: 279 KAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ GA+L+Q YTSF YHG L+ +IK +L + L+ +G++SVS+AVG
Sbjct: 301 RNGAALIQAYTSFTYHGFGLLNQIKKDLVQRLKADGFSSVSEAVG 345
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 27 THNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKT 86
+ N +S +AR+ A+V VA Y +N+SSPNT +LR +Q + L+ LL
Sbjct: 147 SSNAVSDYARLAAYV-----------SSVADYITLNISSPNTVSLRDMQKVEILEELLIA 195
Query: 87 VVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
V + A+ I +K+APDL+ + I + L V GI+
Sbjct: 196 V-----KAAVGSNVRIFIKVAPDLAEGAEVGIISLALKHKVAGII 235
>gi|409100070|ref|ZP_11220094.1| dihydroorotate dehydrogenase 2 [Pedobacter agri PB92]
Length = 343
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 122/188 (64%), Gaps = 5/188 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D V D +K + DV YFVVNVSSPNT LR+LQ K+ LK++L T+ + + +
Sbjct: 158 DAVSDYIKCFDRLFDVVDYFVVNVSSPNTPGLRELQEKEPLKNILHTLQQRNRKNDISR- 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR-YKEETGGLSG 238
PIL+KIAPDL+ + DI ++V ++ K+ G+I +NTT+ R + ETGGLSG
Sbjct: 217 -PILLKIAPDLTDAQLDDIIEIV--AETKIAGIIATNTTISRENLATEKVLAGETGGLSG 273
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+P+R +STE+I + + + PIIGVGG+ S +DA EK++AGASLVQ+YT F+Y GP L
Sbjct: 274 KPVRERSTEVIKYLSEKSNKAFPIIGVGGIHSAQDAQEKLEAGASLVQLYTGFIYEGPGL 333
Query: 299 VTRIKSEL 306
+ I L
Sbjct: 334 IKSICKSL 341
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT LR+LQ K+ LK++L T+ + + + PIL+KIAPDL+
Sbjct: 172 DVVDYFVVNVSSPNTPGLRELQEKEPLKNILHTLQQRNRKNDIS--RPILLKIAPDLTDA 229
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V ++ + GI+
Sbjct: 230 QLDDIIEIVAETKIAGII 247
>gi|408370918|ref|ZP_11168691.1| dihydroorotate dehydrogenase 2 [Galbibacter sp. ck-I2-15]
gi|407743686|gb|EKF55260.1| dihydroorotate dehydrogenase 2 [Galbibacter sp. ck-I2-15]
Length = 338
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 115/165 (69%), Gaps = 5/165 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ L LL + + N+ KP PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLGQL-QLLNKTKDKP-KPILLKIAPDLTNEQLMD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I +V ++ K+ G+I +NTT+ R L + K+ETGGLSG PL+++STE+I + + +
Sbjct: 230 IVAIV--TQTKIAGVIATNTTISRTA-LQSENKKETGGLSGAPLKDRSTEVIRFLSQASH 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
PIIGVGG+ S +DA EK++AGASLVQIYT F+Y GP L+ I
Sbjct: 287 QGFPIIGVGGIHSAEDALEKLEAGASLVQIYTGFIYQGPGLIKSI 331
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ L LL ++ N+ KP PIL+KIAPDL+ ++ D
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLGQ-LQLLNKTKDKP-KPILLKIAPDLTNEQLMD 229
Query: 118 IADVVLDS-VKGIL 130
I +V + + G++
Sbjct: 230 IVAIVTQTKIAGVI 243
>gi|326404352|ref|YP_004284434.1| dihydroorotate dehydrogenase [Acidiphilium multivorum AIU301]
gi|325051214|dbj|BAJ81552.1| dihydroorotate dehydrogenase [Acidiphilium multivorum AIU301]
Length = 354
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 7/213 (3%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
+L K+ AD + D + A Y +NVSSPNT LR LQA D+L +L +
Sbjct: 138 NLGINKEGADPLADYPALVAAVAPHADYVAINVSSPNTPGLRDLQAADRLAAILDAI--- 194
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
+ AV PP+ VK+APDL ++ D+ + V GLIVSNTT+ R E L +
Sbjct: 195 --RAAVPNAPPLFVKLAPDLDEAALPELVDMAIGRA--VAGLIVSNTTLARPESLRGAAR 250
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG PL N++T +++ + L +L +IGVGGV + + A K +AGASLVQ+YT+
Sbjct: 251 GEAGGLSGAPLFNRATRMLARVRLLAGDRLLLIGVGGVATPEQALAKFRAGASLVQVYTA 310
Query: 291 FVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
FVY GP L+ R+ + L LL + G ++++ VG
Sbjct: 311 FVYQGPSLLPRLAAGLSALLDQYGAATLAELVG 343
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +NVSSPNT LR LQA D+L +L + + A+ PP+ VK+APDL
Sbjct: 163 ADYVAINVSSPNTPGLRDLQAADRLAAILDAI-----RAAVPNAPPLFVKLAPDLDEAAL 217
Query: 116 KDIADVVLD-SVKGIL 130
++ D+ + +V G++
Sbjct: 218 PELVDMAIGRAVAGLI 233
>gi|427409581|ref|ZP_18899783.1| dihydroorotate oxidase [Sphingobium yanoikuyae ATCC 51230]
gi|425711714|gb|EKU74729.1| dihydroorotate oxidase [Sphingobium yanoikuyae ATCC 51230]
Length = 350
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 7/200 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D G+ +A Y VN+SSPNT LR LQ + L LL V+ R + PPI
Sbjct: 155 DYATGVTCMAPLADYLTVNISSPNTPGLRALQGRAALDDLLGAVMAARPEGG----PPIF 210
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+K+APDL + +DIA +D + +D LIVSNTT+ R L + + ETGGLSG PL +
Sbjct: 211 LKVAPDLEPADIEDIAAACIDHR--IDALIVSNTTITR-PALQSVHAGETGGLSGAPLTD 267
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
S + + +L +LP+IGVGG+ + + A+ +I+AGASLVQ+Y++ VY GP L RI
Sbjct: 268 LSLGKLRDFRRLLGDRLPLIGVGGIANAEQAYARIRAGASLVQVYSALVYEGPYLARRIN 327
Query: 304 SELEELLQKEGYNSVSQAVG 323
L+ L+ ++G + + VG
Sbjct: 328 EGLKALMARDGVRHIGEVVG 347
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ +A Y VN+SSPNT LR LQ + L LL V+ R + PPI +
Sbjct: 156 YATGVTCMAPLADYLTVNISSPNTPGLRALQGRAALDDLLGAVMAARPEGG----PPIFL 211
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL + +DIA +D
Sbjct: 212 KVAPDLEPADIEDIAAACID 231
>gi|448427386|ref|ZP_21583733.1| dihydroorotate dehydrogenase 2 [Halorubrum terrestre JCM 10247]
gi|445678576|gb|ELZ31065.1| dihydroorotate dehydrogenase 2 [Halorubrum terrestre JCM 10247]
Length = 351
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V I ++ + + D D + + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPEVPVGI--NIGKSKSTPLEDAPDDYLYTYERVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ L+ +L T+ + P+LVK++PDL D VV D +DG+
Sbjct: 189 ELQNREALEGILGTLADAGAD-------PLLVKLSPDLPEPAVDDALGVVDD--LDLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + + E GGLSG+P+ + +TE + Y + +P+IGVGG+
Sbjct: 240 IATNTTTSRPDSLRSNNRAERGGLSGKPIESLATERVR--YVAERTDVPVIGVGGISDAA 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLVQ+YT VY GP L I L ELL+++G++SV AVGA
Sbjct: 298 GAYEKIRAGASLVQLYTGLVYEGPGLARDINEGLVELLERDGFDSVEDAVGA 349
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LV
Sbjct: 161 YLYTYERVADAGDYFVVNVSSPNTPGLRELQNREALEGILGTLADAGAD-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++PDL D VV D
Sbjct: 214 KLSPDLPEPAVDDALGVVDD 233
>gi|429115007|ref|ZP_19175925.1| Dihydroorotate dehydrogenase [Cronobacter sakazakii 701]
gi|426318136|emb|CCK02038.1| Dihydroorotate dehydrogenase [Cronobacter sakazakii 701]
Length = 213
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + +L+ K P+ VKIAPDLSL+
Sbjct: 43 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPVAVKIAPDLSLE 102
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 103 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLS 160
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 161 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 213
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + +L+ K P+
Sbjct: 32 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPV 91
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 92 AVKIAPDLSLEELIQVADSLVRHNIDGVI 120
>gi|227537187|ref|ZP_03967236.1| dihydroorotate oxidase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242902|gb|EEI92917.1| dihydroorotate oxidase [Sphingobacterium spiritivorum ATCC 33300]
Length = 344
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 118/184 (64%), Gaps = 5/184 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D VLD + D YFVVNVSSPNT LR LQ K+ L ++L+ +++ N+ V
Sbjct: 156 DAVLDYIYCFKALFDYVDYFVVNVSSPNTPGLRDLQEKEPLMNILRQLMDINNKDGVSK- 214
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETGGLSG 238
PIL+KIAPDL+ + DI ++V + K+ G+I +NTT+ R D +ETGG+SG
Sbjct: 215 -PILLKIAPDLTDSQLDDIVEIV--QETKIAGVIATNTTISRDGLQSDPNLVKETGGVSG 271
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+PL N+STE+I + + PIIGVGG+ S +DA EK+ AGASL+Q+YT F+Y GP L
Sbjct: 272 KPLTNRSTEVIRYLADKSGRSFPIIGVGGIHSAQDAIEKLDAGASLIQVYTGFIYEGPGL 331
Query: 299 VTRI 302
++ I
Sbjct: 332 ISDI 335
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ K+ L ++L+ +++ N+ + PIL+KIAPDL+
Sbjct: 170 DYVDYFVVNVSSPNTPGLRDLQEKEPLMNILRQLMDINNKDGVS--KPILLKIAPDLTDS 227
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V ++ + G++
Sbjct: 228 QLDDIVEIVQETKIAGVI 245
>gi|114705303|ref|ZP_01438211.1| dihydroorotate dehydrogenase [Fulvimarina pelagi HTCC2506]
gi|114540088|gb|EAU43208.1| dihydroorotate dehydrogenase [Fulvimarina pelagi HTCC2506]
Length = 366
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 5/212 (2%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
++ K+ AD V D V+G+ F +A Y VNVSSPNT LR LQA +L LL+ V+
Sbjct: 139 NIGANKNAADRVADYVEGVASFAPLASYLTVNVSSPNTPGLRDLQATKELDRLLEHVIAA 198
Query: 171 RN---QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
RN ++ P+ +K+APDL+ + +IA K KVDGL+VSNTT+ R
Sbjct: 199 RNGEAAVSASARVPVFLKVAPDLTKTQIAEIAGTA--KKRKVDGLVVSNTTLSRTGVEGH 256
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
R ETGGLSG PLR ++T +++ K ++ +IGVGGV EK++AGA LVQI
Sbjct: 257 RSAHETGGLSGRPLRARATSVLAHFRKALGPEMALIGVGGVSDTASLIEKVEAGADLVQI 316
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
YT+ VY GP L + I + L + L++ +++
Sbjct: 317 YTALVYGGPNLPSTILNGLLDHLKRNEIETIT 348
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN---QLALKPLPP 101
++ G+ F +A Y VNVSSPNT LR LQA +L LL+ V+ RN ++ P
Sbjct: 153 YVEGVASFAPLASYLTVNVSSPNTPGLRDLQATKELDRLLEHVIAARNGEAAVSASARVP 212
Query: 102 ILVKIAPDLSLDEKKDIA 119
+ +K+APDL+ + +IA
Sbjct: 213 VFLKVAPDLTKTQIAEIA 230
>gi|448451525|ref|ZP_21592825.1| dihydroorotate dehydrogenase 2 [Halorubrum litoreum JCM 13561]
gi|445810381|gb|EMA60406.1| dihydroorotate dehydrogenase 2 [Halorubrum litoreum JCM 13561]
Length = 351
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V I ++ + + D D + + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPEVPVGI--NIGKSKSTPLEDAPDDYLYTYERVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ L+ +L T+ + P+LVK++PDL D VV D +DG+
Sbjct: 189 ELQNREALEGILGTLADAGAD-------PLLVKLSPDLPEPAVDDALGVVDD--LDLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + + E GGLSG+P+ + +TE + Y + +P+IGVGG+
Sbjct: 240 IATNTTTSRPDSLRSHNRAERGGLSGKPIESLATERVR--YVAERTDVPVIGVGGISDAT 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLVQ+YT VY GP L I L ELL+++G++SV AVGA
Sbjct: 298 GAYEKIRAGASLVQLYTGLVYEGPGLARDINEGLVELLERDGFDSVEDAVGA 349
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LV
Sbjct: 161 YLYTYERVADAGDYFVVNVSSPNTPGLRELQNREALEGILGTLADAGAD-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++PDL D VV D
Sbjct: 214 KLSPDLPEPAVDDALGVVDD 233
>gi|353237372|emb|CCA69346.1| related to dihydroorotate dehydrogenase, mitochondrial precursor
[Piriformospora indica DSM 11827]
Length = 490
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 135/231 (58%), Gaps = 4/231 (1%)
Query: 84 LKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIA-DVVLDSVKGILKFGDVAHYFVVN 142
L+ TRN P +L ++L + K A D + D + G+ FG +A VVN
Sbjct: 187 LQARYATRNAAENHPNGSLLDNKILSINLGKNKSSAPDSLSDFLLGVQTFGPLADVLVVN 246
Query: 143 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV-KPLPPILVKIAPDLSLDEKKDIADV 201
VSSPNT LR LQ++ L LL V R+ L + + LP +LVKIAPDLS +E D+A+
Sbjct: 247 VSSPNTPGLRGLQSRGMLIELLDAVKRERDSLHMDRALPKLLVKIAPDLSEEELTDVAEA 306
Query: 202 VLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLP 261
V ++ +DG+IVSNTT+ R E + + K+E GGLSG PL+ + + + L +P
Sbjct: 307 VRETG--IDGVIVSNTTIQRPEGVKSANKKEAGGLSGVPLKPLTLRALKTLRPLLPASIP 364
Query: 262 IIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
I+G GG+ +G DA E +AGA+ VQ+YTSF Y G RIK E+ + L++
Sbjct: 365 IVGCGGIATGADALEYARAGATTVQLYTSFAYGGAGTPRRIKDEIVDELRR 415
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL-KPLP 100
L +LLG+ FG +A VVNVSSPNT LR LQ++ L LL V R+ L + + LP
Sbjct: 226 LSDFLLGVQTFGPLADVLVVNVSSPNTPGLRGLQSRGMLIELLDAVKRERDSLHMDRALP 285
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+LVKIAPDLS +E D+A+ V ++ + G++
Sbjct: 286 KLLVKIAPDLSEEELTDVAEAVRETGIDGVI 316
>gi|428209761|ref|YP_007094114.1| dihydroorotate oxidase A [Chroococcidiopsis thermalis PCC 7203]
gi|428011682|gb|AFY90245.1| dihydroorotate oxidase A [Chroococcidiopsis thermalis PCC 7203]
Length = 384
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 148/249 (59%), Gaps = 19/249 (7%)
Query: 83 LLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVN 142
+ + + E N +P+P + + + + AD L+S + + +GD YFVVN
Sbjct: 139 MAQRLAENNNSPTFRPIP-LGINLGKSKITPLESAAADY-LNSFRLLKAWGD---YFVVN 193
Query: 143 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV 202
VSSPNT LR LQ QL +L + + NQ PILVKIAPDL + +I D+
Sbjct: 194 VSSPNTPGLRSLQDAAQLGLILDAL-QQENQ----GRKPILVKIAPDLEWEAIVNILDIA 248
Query: 203 LDSKCKVDGLIVSNTTVDR----YEYLDARYK---EETGGLSGEPLRNKSTELISEMYKL 255
++ G+I +NTT+ R + + K EE GG+SG P+R++STE+I +Y+
Sbjct: 249 --QTYQLAGIIATNTTIRRDGLKTQIIAKTGKSIVEEAGGISGLPVRDRSTEIIRFIYQQ 306
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T+G+LPIIGVGG+F+ +DA+EKI AGASL+Q+YTS++Y G +V I + L + + K
Sbjct: 307 TQGQLPIIGVGGIFTAEDAWEKIIAGASLIQVYTSWIYEGIGIVNHILAGLLQKMAKHDL 366
Query: 316 NSVSQAVGA 324
NS+S+A G+
Sbjct: 367 NSISEARGS 375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 20/94 (21%)
Query: 29 NMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 88
+ L+SF ++AW GD YFVVNVSSPNT LR LQ QL +L +
Sbjct: 175 DYLNSFRLLKAW------------GD---YFVVNVSSPNTPGLRSLQDAAQLGLILDA-L 218
Query: 89 ETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+ NQ PILVKIAPDL + +I D+
Sbjct: 219 QQENQ----GRKPILVKIAPDLEWEAIVNILDIA 248
>gi|126663579|ref|ZP_01734576.1| dihydroorotate dehydrogenase [Flavobacteria bacterium BAL38]
gi|126624527|gb|EAZ95218.1| dihydroorotate dehydrogenase [Flavobacteria bacterium BAL38]
Length = 362
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-LPPILVKIAPDLSLDEKK 196
YFVVNVSSPNT NLR+LQ K L LL+T+ + N KP PIL+KIAPDL+ ++
Sbjct: 196 YFVVNVSSPNTPNLRELQDKKPLTELLQTLQDKNNS---KPNQKPILLKIAPDLTDEQLL 252
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DI D+V ++ K+ G+I +NTT+ R E L + K E GGLSG+PL +STE+I + + +
Sbjct: 253 DIIDIV--NETKIAGVIATNTTIYR-EGLQSENKSEMGGLSGKPLTKRSTEVIRFLSEKS 309
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ + +DA EK++AGASLVQ+YT F+Y GP L+ I L
Sbjct: 310 NKSFPIIGVGGIHTAEDALEKLEAGASLVQLYTGFIYEGPQLIKDINKAL 359
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPILVKIAPDLSLDEKK 116
YFVVNVSSPNT NLR+LQ K L LL+T+ + N KP PIL+KIAPDL+ ++
Sbjct: 196 YFVVNVSSPNTPNLRELQDKKPLTELLQTLQDKNNS---KPNQKPILLKIAPDLTDEQLL 252
Query: 117 DIADVV 122
DI D+V
Sbjct: 253 DIIDIV 258
>gi|357414560|ref|YP_004926296.1| dihydroorotate dehydrogenase [Streptomyces flavogriseus ATCC 33331]
gi|320011929|gb|ADW06779.1| dihydroorotate dehydrogenase [Streptomyces flavogriseus ATCC 33331]
Length = 369
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 156 AEAVGDYVKSTERLAAHADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTDR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY---LDARYKEETGG 235
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R DA +ETGG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIARDGLGLRSDASLVQETGG 273
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+ +S E++S +Y +L ++GVGG+ + +DA+++I AGA+LVQ Y++F+Y G
Sbjct: 274 LSGAPLKERSLEVLSRLYARVGTRLTLVGVGGIENAEDAWQRILAGATLVQGYSAFIYEG 333
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P I L L Y ++++AVGA
Sbjct: 334 PFYARAIHKGLAARLAASPYATLAEAVGA 362
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTDRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|448738139|ref|ZP_21720170.1| dihydroorotate dehydrogenase 2 [Halococcus thailandensis JCM 13552]
gi|445802723|gb|EMA53027.1| dihydroorotate dehydrogenase 2 [Halococcus thailandensis JCM 13552]
Length = 349
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 119/187 (63%), Gaps = 11/187 (5%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT LR LQ ++ L+ +L T+ + P+LVK++PDL+ D +
Sbjct: 172 YFVVNVSSPNTPGLRDLQNREHLERILGTLQDAGAS-------PLLVKLSPDLTDDATAE 224
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
+V + +DG+I +NTT +R L +++ E GGLSG PL +++T + + + T
Sbjct: 225 AIEVA--EERSLDGIIATNTTTERASSLRGKHRTEEGGLSGAPLESRATRAVRFVAERTD 282
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNS 317
+P+IGVGGV + KDA+ KI+AGASLVQ+YT VY GP + I L LL+++G+ S
Sbjct: 283 --MPVIGVGGVSNAKDAYRKIRAGASLVQLYTGLVYRGPAIARAINRGLLALLERDGFES 340
Query: 318 VSQAVGA 324
V+ AVGA
Sbjct: 341 VADAVGA 347
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT LR LQ ++ L+ +L T+ + P+LVK++PDL+ D +
Sbjct: 172 YFVVNVSSPNTPGLRDLQNREHLERILGTLQDAGAS-------PLLVKLSPDLTDDATAE 224
Query: 118 IADVVLD-SVKGIL 130
+V + S+ GI+
Sbjct: 225 AIEVAEERSLDGII 238
>gi|284176193|ref|YP_003406470.1| dihydroorotate dehydrogenase [Haloterrigena turkmenica DSM 5511]
gi|284017850|gb|ADB63797.1| dihydroorotate dehydrogenase [Haloterrigena turkmenica DSM 5511]
Length = 356
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 19/289 (6%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET---RNQLALK 97
L+ G ++ G V Y P LR+ + +ET R +
Sbjct: 79 ALEALGFGFVEIGTVTPYPQEGNDRPRLFRLREDEGMINRMGFNGQGMETVKERLEEDGT 138
Query: 98 PLPPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
P P+ V I S E++ I D V D V A Y VVNVS PNT +
Sbjct: 139 PGFPLGVNIGKMNSSTEREAIEDYRRVFDRVSPF------ADYVVVNVSCPNTPDEFNEA 192
Query: 156 AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ + L+ + +T+ E N V P+LVKI PD D D+ D+V + +DG++ +
Sbjct: 193 SPEHLRAIFETL-EAENDGNV----PMLVKIGPDEPEDAILDLVDIV--QEFGLDGIVAT 245
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NT+ R E L++ +EE GGLSG P+ ++ST++I + T G+LPI+GVGGV S A+
Sbjct: 246 NTSTAR-EGLESPAREEWGGLSGAPIEDRSTDVIRTIAGHTDGELPIVGVGGVDSAASAY 304
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
EKI+AGASLVQ+YT FVY GP RI L +LL+++G++SV AVGA
Sbjct: 305 EKIRAGASLVQLYTGFVYRGPSTAGRINQGLVDLLERDGFSSVEDAVGA 353
>gi|253997310|ref|YP_003049374.1| dihydroorotate dehydrogenase 2 [Methylotenera mobilis JLW8]
gi|253983989|gb|ACT48847.1| dihydroorotate dehydrogenase [Methylotenera mobilis JLW8]
Length = 338
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR LQ K+ L LL T+ + LA + PI +KIAPDL L+
Sbjct: 167 ASYITVNISSPNTKNLRALQEKEALSDLLATLKAEQLILAEQHGRYVPIALKIAPDLELE 226
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD+++ K +DG+I +NTT+ R + ETGGLSG P+R+KST +I ++
Sbjct: 227 QVNEIADLLMLHK--IDGVIATNTTLSRDAVQGMQNAAETGGLSGAPVRDKSTVVIQQLS 284
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G LPIIGVGG+ SG DA EKI AGASLVQ+Y+ +Y GP L+ + L
Sbjct: 285 QRLQGALPIIGVGGILSGADAVEKIAAGASLVQLYSGLIYKGPQLIRDVAQAL 337
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 25 TPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL 84
TP N +S +L+ + K A Y VN+SSPNT NLR LQ K+ L LL
Sbjct: 147 TPNENAVSD-----------YLICMRKVYAYASYITVNISSPNTKNLRALQEKEALSDLL 195
Query: 85 KTVVETRNQLALK--PLPPILVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
T+ + LA + PI +KIAPDL L++ +IAD ++L + G++
Sbjct: 196 ATLKAEQLILAEQHGRYVPIALKIAPDLELEQVNEIADLLMLHKIDGVI 244
>gi|146299966|ref|YP_001194557.1| dihydroorotate dehydrogenase 2 [Flavobacterium johnsoniae UW101]
gi|189038420|sp|A5FHT2.1|PYRD_FLAJ1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|146154384|gb|ABQ05238.1| Dihydroorotate oxidase [Flavobacterium johnsoniae UW101]
Length = 344
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 129/207 (62%), Gaps = 8/207 (3%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
V I ++ ++ D D V D + + YFVVNVSSPNT NLR LQ K+ L L
Sbjct: 138 VLIGGNIGKNKVTDNEDAVKDYIICFDALYNHVDYFVVNVSSPNTPNLRALQDKEPLTAL 197
Query: 164 LKTVVETRN----QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV 219
L+T+ + RN + + + + PIL+KIAPDL+ ++ DI D+V ++ G+I +NTT+
Sbjct: 198 LQTL-QNRNVEKQKTSTQKVKPILLKIAPDLTDEQLLDIIDIV--KTTQIAGVIATNTTI 254
Query: 220 DRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIK 279
R E L + + ETGGLSG+PL +STE+I + + + PIIGVGG+ S DA EK+
Sbjct: 255 SR-EGLQSSNQSETGGLSGKPLTKRSTEVIRFLSEKSNKAFPIIGVGGIHSADDAIEKLN 313
Query: 280 AGASLVQIYTSFVYHGPPLVTRIKSEL 306
AGASLVQ+YT F+Y GP L+ I ++
Sbjct: 314 AGASLVQLYTGFIYEGPALIKAINKKV 340
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN----QLALKPLPPILVKIAPDLSLD 113
YFVVNVSSPNT NLR LQ K+ L LL+T ++ RN + + + + PIL+KIAPDL+ +
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLQT-LQNRNVEKQKTSTQKVKPILLKIAPDLTDE 230
Query: 114 EKKDIADVV 122
+ DI D+V
Sbjct: 231 QLLDIIDIV 239
>gi|352089996|ref|ZP_08954233.1| dihydroorotate dehydrogenase [Rhodanobacter sp. 2APBS1]
gi|351678532|gb|EHA61678.1| dihydroorotate dehydrogenase [Rhodanobacter sp. 2APBS1]
Length = 345
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 6/187 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLS 191
++A Y VN+SSPNT LR LQ + L+ + + E + +L + P+L+KIAPDLS
Sbjct: 163 ELASYVTVNISSPNTQGLRDLQEEATLRRFISVLREAQERLGSQQGRRKPMLLKIAPDLS 222
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
E IA+V+L + +DG+I +NTT+D D E GGLSG+PL ++ST +++
Sbjct: 223 EAELDAIAEVLL--RTGIDGVICTNTTIDHTAVADDARGNEAGGLSGKPLFDRSTAVLAG 280
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
M+K +G++P+IGVGG+ G DA EK++ GASLVQ+Y+ +Y GPPLV E+ Q
Sbjct: 281 MHKRLQGRIPLIGVGGILDGSDAAEKMELGASLVQLYSGLIYRGPPLVAECVDEIRR--Q 338
Query: 312 KEGYNSV 318
+E N V
Sbjct: 339 REAANVV 345
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 2 VGLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVV 61
+G + + ++ V RSG G N+ + + +LL + + ++A Y V
Sbjct: 112 MGFNNAGVDALVRNVQRSGYHGVLGI-NIGKNKGTPNEKAVSDYLLCLTRVYELASYVTV 170
Query: 62 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLDEKKDIA 119
N+SSPNT LR LQ + L+ + + E + +L + P+L+KIAPDLS E IA
Sbjct: 171 NISSPNTQGLRDLQEEATLRRFISVLREAQERLGSQQGRRKPMLLKIAPDLSEAELDAIA 230
Query: 120 DVVLDS-VKGIL 130
+V+L + + G++
Sbjct: 231 EVLLRTGIDGVI 242
>gi|170596384|ref|XP_001902745.1| Dihydroorotate dehydrogenase, mitochondrial precursor [Brugia
malayi]
gi|158589393|gb|EDP28406.1| Dihydroorotate dehydrogenase, mitochondrial precursor, putative
[Brugia malayi]
Length = 167
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Query: 178 PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLS 237
P P IL+KI PDLS+ + K + +VL+ + VDG+I+SN+T + + L + E+ G LS
Sbjct: 18 PPPKILIKIPPDLSIIDLKKVIKIVLNKRYNVDGIIISNSTTNHPKNLQSVLLED-GFLS 76
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PLR+ ST I +Y L+ GK+PIIG GG+ +G+DA+EKI+AGASLVQ+Y+S +Y G P
Sbjct: 77 GRPLRDISTNCIRNVYSLSHGKIPIIGCGGISTGQDAYEKIRAGASLVQLYSSLLYQGFP 136
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
++ RIK EL E L ++G+ ++S+AVGA H+
Sbjct: 137 VIGRIKRELVECLARDGFRNISEAVGADHR 166
>gi|448385032|ref|ZP_21563611.1| dihydroorotate dehydrogenase 2 [Haloterrigena thermotolerans DSM
11522]
gi|445657317|gb|ELZ10145.1| dihydroorotate dehydrogenase 2 [Haloterrigena thermotolerans DSM
11522]
Length = 356
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 153/283 (54%), Gaps = 19/283 (6%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPLP--PIL 103
G ++ G V Y P LR+ Q +++ + + +++L P P+
Sbjct: 85 FGFVEIGTVTPYPQSGNDRPRLFRLREDQGMINRMGFNGQGMERVKSRLEADGTPGIPLG 144
Query: 104 VKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLK 161
V + S E++ I D V D + A Y VVNVS PNT + + L+
Sbjct: 145 VNVGKMNSSSEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPEEFDEGSPEHLR 198
Query: 162 HLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +T+ E ++ PILVKI PD + D+ D+V + +DG++ +NT+ R
Sbjct: 199 AIFETLEEENDRDV-----PILVKIGPDEPEESIFDLVDIV--QEFGLDGIVATNTSTSR 251
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
E L++ +EE GGLSG+P+ ++ST +I + + T G LPI+GVGGV S + A+EKI+AG
Sbjct: 252 -EGLESPRQEEWGGLSGKPITDRSTAVIRSLAEYTDGDLPIVGVGGVDSAESAYEKIRAG 310
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
ASLVQ+YT FVY GP RI L LL+++G+ SV AVGA
Sbjct: 311 ASLVQLYTGFVYQGPSTAKRINRGLAALLERDGFASVEDAVGA 353
>gi|395800384|ref|ZP_10479660.1| dihydroorotate dehydrogenase 2 [Flavobacterium sp. F52]
gi|395437557|gb|EJG03475.1| dihydroorotate dehydrogenase 2 [Flavobacterium sp. F52]
Length = 344
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
V I ++ ++ D D V D + + YFVVNVSSPNT NLR LQ K+ L L
Sbjct: 138 VLIGGNIGKNKVTDNEDAVKDYIICFDALFNHVDYFVVNVSSPNTPNLRALQDKEPLTAL 197
Query: 164 LKTVVETRN----QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV 219
L+T+ + RN + + + + PIL+KIAPDL+ ++ DI D+V ++ G+I +NTT+
Sbjct: 198 LQTL-QNRNVEKQKTSTQKVKPILLKIAPDLTDEQLLDIIDIV--KTTQIAGVIATNTTI 254
Query: 220 DRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIK 279
R E L + ++E GGLSG+PL +STE+I + + + PIIGVGG+ S DA EK+
Sbjct: 255 SR-EGLQSSNQKEMGGLSGKPLTKRSTEVIRFLSEKSNKAFPIIGVGGIHSADDAIEKLN 313
Query: 280 AGASLVQIYTSFVYHGPPLVTRI-KSELEEL 309
AGASLVQ+YT F+Y GP L+ I K LE+L
Sbjct: 314 AGASLVQLYTGFIYEGPALIKAINKKVLEQL 344
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN----QLALKPLPPILVKIAPDLSLD 113
YFVVNVSSPNT NLR LQ K+ L LL+T ++ RN + + + + PIL+KIAPDL+ +
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLQT-LQNRNVEKQKTSTQKVKPILLKIAPDLTDE 230
Query: 114 EKKDIADVV 122
+ DI D+V
Sbjct: 231 QLLDIIDIV 239
>gi|389841501|ref|YP_006343585.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii ES15]
gi|387851977|gb|AFK00075.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii ES15]
Length = 336
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + +L+ K P+ VKIAPDLSL+
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPVAVKIAPDLSLE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + +L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSLEELIQVADSLVRHNIDGVI 243
>gi|304394059|ref|ZP_07375982.1| dihydroorotate oxidase [Ahrensia sp. R2A130]
gi|303293499|gb|EFL87876.1| dihydroorotate oxidase [Ahrensia sp. R2A130]
Length = 360
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L K D D V GI F +A YF VN+SSPNT LR LQ D L LL V +
Sbjct: 140 INLGANKTSDDFAADYVAGIEAFAHLADYFTVNISSPNTPGLRALQGADPLADLLSRVSD 199
Query: 170 TRN-QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
R+ Q P+ +KIAPDL +E IA + S +D LIVSNTT+ R + L +R
Sbjct: 200 ARDGQTNAYGRKPLFLKIAPDLDQNELDAIAKALDGSG--MDALIVSNTTLGR-DGLRSR 256
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
++ETGGLSG PL ST +++MY+ LP++GVGGV + A++KI+AGASLVQ+Y
Sbjct: 257 NRDETGGLSGAPLFELSTIRLAQMYQRVGKCLPLVGVGGVRDAETAWQKIEAGASLVQLY 316
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
T +Y GP L I L + L+ + S++ G
Sbjct: 317 TGMIYAGPGLSASIIKGLSKRLKSDDAYSIADVTG 351
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN-QLALKPLPPIL 103
++ GI F +A YF VN+SSPNT LR LQ D L LL V + R+ Q P+
Sbjct: 155 YVAGIEAFAHLADYFTVNISSPNTPGLRALQGADPLADLLSRVSDARDGQTNAYGRKPLF 214
Query: 104 VKIAPDLSLDEKKDIA 119
+KIAPDL +E IA
Sbjct: 215 LKIAPDLDQNELDAIA 230
>gi|218289794|ref|ZP_03493994.1| Dihydroorotate oxidase [Alicyclobacillus acidocaldarius LAA1]
gi|218240085|gb|EED07270.1| Dihydroorotate oxidase [Alicyclobacillus acidocaldarius LAA1]
Length = 357
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 125/191 (65%), Gaps = 10/191 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLAVKPLPPILVKIAPDLSLD 193
A Y +NVSSPNT LR LQ++ + LL+ + + +R++L P+ VK+APDL
Sbjct: 169 ADYLTINVSSPNTPGLRDLQSEAFILDLLRAIEPIRSRHRL------PVWVKLAPDLQNG 222
Query: 194 EKKDIADVVLDSKCKVD-GLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
E + I D + S + GLI +NTTV+R L R++ E GGLSG PL +STE++
Sbjct: 223 EIERIVDALATSPFRDHLGLICTNTTVER-PRLSGRFRYEAGGLSGRPLAARSTEVVRIA 281
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
+ + ++PIIG GGVF+ +DA+EKI++GASLVQIYT+ +Y GP +V + L+ LL +
Sbjct: 282 ARAARRRMPIIGSGGVFTAEDAYEKIRSGASLVQIYTALIYRGPAVVGELVRGLDALLAR 341
Query: 313 EGYNSVSQAVG 323
+G+ ++++AVG
Sbjct: 342 DGFANIAEAVG 352
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ + + + A Y +NVSSPNT LR LQ++ + LL+ + R++ L P+ V
Sbjct: 158 YRMALEQVAPCADYLTINVSSPNTPGLRDLQSEAFILDLLRAIEPIRSRHRL----PVWV 213
Query: 105 KIAPDLSLDEKKDIADVVLDS 125
K+APDL E + I D + S
Sbjct: 214 KLAPDLQNGEIERIVDALATS 234
>gi|284040690|ref|YP_003390620.1| dihydroorotate dehydrogenase [Spirosoma linguale DSM 74]
gi|283819983|gb|ADB41821.1| dihydroorotate dehydrogenase [Spirosoma linguale DSM 74]
Length = 349
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 116/178 (65%), Gaps = 11/178 (6%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSL 192
D YFVVNVSSPNT LR LQ + L LL T ++ N+L +P P PIL+KIAPDL+
Sbjct: 174 DAVDYFVVNVSSPNTPGLRDLQERGPLTQLL-TALQQENRL--RPAPKPILLKIAPDLTN 230
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET----GGLSGEPLRNKSTEL 248
+ DI +V ++ + G+I +NTT+ R + L T GG+SG PLR ++TE+
Sbjct: 231 GQLDDIIGIV--AETGIAGVIATNTTISR-DGLATDTATVTQMGAGGISGRPLRERATEV 287
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
I +++ + G PIIGVGG+FS +DA EK++AGASLVQ+YTSF+Y GP L RI L
Sbjct: 288 IRYLHQQSGGAFPIIGVGGIFSAEDAQEKLRAGASLVQVYTSFIYEGPALAKRINKAL 345
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 24/129 (18%)
Query: 23 GCTPTHNMLSSFARMRAW-------------------VLQFWLLGILKFGDVAHYFVVNV 63
G P L FAR R L +L+ + D YFVVNV
Sbjct: 124 GAGPAAERLRHFARNRGGRQVIVGGNIGKNKDTANEQALSDYLICFRELFDAVDYFVVNV 183
Query: 64 SSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKKDIADVV 122
SSPNT LR LQ + L LL T ++ N+ L+P P PIL+KIAPDL+ + DI +V
Sbjct: 184 SSPNTPGLRDLQERGPLTQLL-TALQQENR--LRPAPKPILLKIAPDLTNGQLDDIIGIV 240
Query: 123 LDS-VKGIL 130
++ + G++
Sbjct: 241 AETGIAGVI 249
>gi|417792473|ref|ZP_12439829.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii E899]
gi|449308756|ref|YP_007441112.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii SP291]
gi|333953442|gb|EGL71388.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii E899]
gi|449098789|gb|AGE86823.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii SP291]
Length = 336
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + +L+ K P+ VKIAPDLSL+
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPVAVKIAPDLSLE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + +L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSLEELIQVADSLVRHNIDGVI 243
>gi|418323062|ref|ZP_12934358.1| dihydroorotate oxidase [Staphylococcus pettenkoferi VCU012]
gi|365230405|gb|EHM71501.1| dihydroorotate oxidase [Staphylococcus pettenkoferi VCU012]
Length = 354
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +K + F + A +F +N+SSPNTANL+ KD+ L K + + R + PI
Sbjct: 158 DYIKVLDTFKNDATFFTINISSPNTANLQNFHDKDEFSMLTKAIKDYRENHELSQ--PIF 215
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+K+ DL L+ K I D ++D+ DG++++NTT R + L + + E GGLSG PL
Sbjct: 216 LKLTSDLELEGFKHILDPIVDT---FDGVVLANTTQQR-DGLKSENRSEGGGLSGRPLFK 271
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
++ +L+ Y+ TKG PII GG+FS +DA E ++ GASLVQIY+S VY GP L +I
Sbjct: 272 RNRDLVRWAYQQTKGTFPIIATGGIFSAEDAIEMMRNGASLVQIYSSLVYEGPGLTAKIN 331
Query: 304 SELEELLQKEGYNSVSQAVG 323
++ + L++ GY++VS +G
Sbjct: 332 KDIVKYLKQHGYHNVSDLIG 351
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
F + A +F +N+SSPNTANL+ KD+ L K + + R L PI +K+ DL
Sbjct: 166 FKNDATFFTINISSPNTANLQNFHDKDEFSMLTKAIKDYRENHELS--QPIFLKLTSDLE 223
Query: 112 LDEKKDIADVVLDSVKGIL 130
L+ K I D ++D+ G++
Sbjct: 224 LEGFKHILDPIVDTFDGVV 242
>gi|402223424|gb|EJU03488.1| hypothetical protein DACRYDRAFT_21066 [Dacryopinax sp. DJM-731 SS1]
Length = 518
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 121/206 (58%), Gaps = 11/206 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D + G+ FG VA VVNVSSPNT LR LQA+ L+ LL VV R+ L
Sbjct: 210 KSSSPDSIDDYLMGVRAFGSVADVLVVNVSSPNTPGLRSLQARGMLEELLSEVVRERDAL 269
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
PL P ++VK+APDL+ E +D+A V KVDG+I+ NTTV R + L +
Sbjct: 270 ---PLMGEKPRVVVKLAPDLTKAEIEDVAAAV--RATKVDGVIMGNTTVQRPDGLKSPQT 324
Query: 231 --EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+ETGGLSG+PL+ + E + L +P+I GG+ SG DA E K GA+ +Q+Y
Sbjct: 325 LVQETGGLSGQPLKPITIEAFKTLRSLLPASIPLIACGGISSGADALEYAKLGAATIQLY 384
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEG 314
T+F Y G IK EL ELL+KEG
Sbjct: 385 TAFGYDGVGTPREIKDELTELLRKEG 410
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 21/143 (14%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL-KPLPPIL 103
+L+G+ FG VA VVNVSSPNT LR LQA+ L+ LL VV R+ L L P ++
Sbjct: 220 YLMGVRAFGSVADVLVVNVSSPNTPGLRSLQARGMLEELLSEVVRERDALPLMGEKPRVV 279
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKH 162
VK+APDL+ E +D+A V + V G++ G+ +Q D LK
Sbjct: 280 VKLAPDLTKAEIEDVAAAVRATKVDGVI-MGNTT-----------------VQRPDGLKS 321
Query: 163 LLKTVVETRNQLAVKPLPPILVK 185
+T+V+ L+ +PL PI ++
Sbjct: 322 -PQTLVQETGGLSGQPLKPITIE 343
>gi|94496615|ref|ZP_01303191.1| dihydroorotate dehydrogenase [Sphingomonas sp. SKA58]
gi|94423975|gb|EAT09000.1| dihydroorotate dehydrogenase [Sphingomonas sp. SKA58]
Length = 350
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPP 181
+ D V G+ +A Y VN+SSPNT LR LQ + L LL V+ R P
Sbjct: 153 IADYVTGVTCMMPLADYLTVNISSPNTPGLRALQDRAALDDLLGAVMAARGADRT----P 208
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
I +K+APDL+ + +DIA D +D LIVSNTT R L + Y E GGLSG PL
Sbjct: 209 IFLKVAPDLTPADMEDIAAACTDHA--IDALIVSNTTTSRPP-LRSVYATEAGGLSGAPL 265
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ S + + +L +LP+IGVGG+ S + A+++I+AGASLVQIY++ VY GP L R
Sbjct: 266 NDLSLARLRDFRRLLGDRLPLIGVGGIASAEHAYDRIRAGASLVQIYSALVYEGPWLARR 325
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
I + L+ L+ ++G ++++ VG
Sbjct: 326 INAGLKALMMRDGVRTIAELVG 347
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ G+ +A Y VN+SSPNT LR LQ + L LL V+ R PI +
Sbjct: 156 YVTGVTCMMPLADYLTVNISSPNTPGLRALQDRAALDDLLGAVMAARGADRT----PIFL 211
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K+APDL+ + +DIA D
Sbjct: 212 KVAPDLTPADMEDIAAACTD 231
>gi|402831722|ref|ZP_10880399.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga sp. CM59]
gi|402281109|gb|EJU29801.1| dihydroorotate dehydrogenase (fumarate) [Capnocytophaga sp. CM59]
Length = 338
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 118/175 (67%), Gaps = 10/175 (5%)
Query: 132 FGDVA---HYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIA 187
FG +A YFVVNVSSPNT NLR LQ K+ L+ LL + E +L P P PIL+KIA
Sbjct: 163 FGQLAPYVDYFVVNVSSPNTPNLRSLQEKEPLQKLLTLLQEANGKL---PKPKPILLKIA 219
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTE 247
PDL+ ++ DI D+V + + G+I +NTT+ R + L + K ETGGLSG+PL +STE
Sbjct: 220 PDLTDEQLLDIIDIV--KQTSIAGVIATNTTISR-DGLTSPKKVETGGLSGKPLTKRSTE 276
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+I + + + PIIGVGG+ S +DA EK+ AGASLVQ++T F+Y GP L+ RI
Sbjct: 277 VIRFLAEKSGHSFPIIGVGGIHSPEDALEKLHAGASLVQLFTGFIYEGPALIKRI 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
Query: 52 FGDVA---HYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIA 107
FG +A YFVVNVSSPNT NLR LQ K+ L+ LL + E +L P P PIL+KIA
Sbjct: 163 FGQLAPYVDYFVVNVSSPNTPNLRSLQEKEPLQKLLTLLQEANGKL---PKPKPILLKIA 219
Query: 108 PDLSLDEKKDIADVVLD-SVKGIL 130
PDL+ ++ DI D+V S+ G++
Sbjct: 220 PDLTDEQLLDIIDIVKQTSIAGVI 243
>gi|320583164|gb|EFW97380.1| dhodase, putative [Ogataea parapolymorpha DL-1]
Length = 608
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 123/209 (58%), Gaps = 12/209 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D V G+ +FG+ A V+NVSSPNT LR LQ + +L +LL VV RN L
Sbjct: 389 KNKTGDEIQDYVAGVQRFGEYADVLVINVSSPNTPGLRDLQNEAKLTNLLTQVVAERNLL 448
Query: 175 AVK-----PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV----DRYEYL 225
K PP+LVKIAPDL+ E + IA + KVDG+I+SNTTV D+
Sbjct: 449 PGKITDRATKPPVLVKIAPDLTEPEIESIAKAA--KQAKVDGIIMSNTTVQRPKDKMLTT 506
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASL 284
D + GGLSG PL+ S + + K TK L ++G GG+ SGKDA + +AGA+
Sbjct: 507 DENLINQAGGLSGRPLKEISLKAFRLLRKHTKDSNLVLVGCGGISSGKDALDFARAGATF 566
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKE 313
VQ+YT+F Y GP L +IK E+ E L++E
Sbjct: 567 VQLYTAFAYKGPGLARKIKDEITEELKRE 595
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK---- 97
+Q ++ G+ +FG+ A V+NVSSPNT LR LQ + +L +LL VV RN L K
Sbjct: 396 IQDYVAGVQRFGEYADVLVINVSSPNTPGLRDLQNEAKLTNLLTQVVAERNLLPGKITDR 455
Query: 98 -PLPPILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
PP+LVKIAPDL+ E + IA + V GI+
Sbjct: 456 ATKPPVLVKIAPDLTEPEIESIAKAAKQAKVDGII 490
>gi|424799054|ref|ZP_18224596.1| Dihydroorotate dehydrogenase [Cronobacter sakazakii 696]
gi|423234775|emb|CCK06466.1| Dihydroorotate dehydrogenase [Cronobacter sakazakii 696]
Length = 336
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + +L+ K P+ VKIAPDLSL+
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPVAVKIAPDLSLE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + +L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSLEELIQVADSLVRHNIDGVI 243
>gi|392532562|ref|ZP_10279699.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas arctica A
37-1-2]
Length = 336
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLIAKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + +Y +E GGLSG P+
Sbjct: 214 MLVKIAPDLDQIQIEQVSESLLNNK--IDGVIATNTTLERAAVMGQQYAQEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LT+GKLPIIGVGG+ A EK+ AGA+LVQ+YT F+Y GP LV
Sbjct: 272 RMRSTEVVSELKRLTQGKLPIIGVGGIDDATSAKEKLDAGANLVQVYTGFIYKGPQLVKS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLIAKHNKQVPMLVKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|427712180|ref|YP_007060804.1| dihydroorotate oxidase A [Synechococcus sp. PCC 6312]
gi|427376309|gb|AFY60261.1| dihydroorotate oxidase A [Synechococcus sp. PCC 6312]
Length = 377
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 132/225 (58%), Gaps = 18/225 (8%)
Query: 101 PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQL 160
PI + + ++ +AD V S + + +GD YFVVNVSSPNT LR LQ++ QL
Sbjct: 153 PIGINLGKSKVTPLEQAVADYV-QSFQVLQPWGD---YFVVNVSSPNTPGLRTLQSRSQL 208
Query: 161 KHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVD 220
+ +L + + N L+ P+L+K+APDL+ + +I + L ++ G+I +NTT+
Sbjct: 209 EPILAGL-QASNHLS----KPLLIKVAPDLAWSDLDEILE--LAQAYQLAGIIATNTTLS 261
Query: 221 RY-------EYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKD 273
R+ + GGLSG PLR KSTE+I +Y+ T G LPIIGVGGVF+
Sbjct: 262 RHGLKTTVLPSTQEPIETAAGGLSGAPLRQKSTEMIRYIYRQTGGTLPIIGVGGVFNAAQ 321
Query: 274 AFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
A+EKI AGASL+Q+YT +VY GP +V I LE+ L + + V
Sbjct: 322 AWEKICAGASLIQVYTGWVYEGPGMVKAILQGLEQYLGDQAWADV 366
>gi|260062182|ref|YP_003195262.1| dihydroorotate dehydrogenase 2 [Robiginitalea biformata HTCC2501]
gi|88783744|gb|EAR14915.1| dihydroorotate dehydrogenase [Robiginitalea biformata HTCC2501]
Length = 345
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 6/175 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV---KPLPPILVKIAPDLSLDE 194
YFVVNVSSPNT LR+LQ K L LL+ + + A+ PIL+KIAPDL+ +
Sbjct: 171 YFVVNVSSPNTPGLRELQEKKPLTELLRIMKRENTKCALVNATREKPILLKIAPDLTDAQ 230
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY-KEETGGLSGEPLRNKSTELISEMY 253
+DI ++V + +DG+I +NTT+ R + Y +EE GGLSG PLR +STE+I +
Sbjct: 231 LRDIIEIV--GETGIDGVIATNTTIARDDLKSDMYLQEEQGGLSGRPLRKRSTEVIRFLV 288
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
+ KG P+IGVGG+ S DA EK+ AGASLVQ++T FVY GP LV +I +L E
Sbjct: 289 EEGKGAFPVIGVGGIHSAGDALEKLDAGASLVQLWTGFVYEGPGLVKKINQKLLE 343
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL---KPLPPILVKIAPDLSLDE 114
YFVVNVSSPNT LR+LQ K L LL+ + + AL PIL+KIAPDL+ +
Sbjct: 171 YFVVNVSSPNTPGLRELQEKKPLTELLRIMKRENTKCALVNATREKPILLKIAPDLTDAQ 230
Query: 115 KKDIADVVLDS-VKGIL 130
+DI ++V ++ + G++
Sbjct: 231 LRDIIEIVGETGIDGVI 247
>gi|389797068|ref|ZP_10200112.1| dihydroorotate dehydrogenase 2 [Rhodanobacter sp. 116-2]
gi|388447901|gb|EIM03895.1| dihydroorotate dehydrogenase 2 [Rhodanobacter sp. 116-2]
Length = 345
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 129/213 (60%), Gaps = 8/213 (3%)
Query: 110 LSLDEKKDIAD--VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + V D + + + ++A Y VN SSPNT LR LQ + L+ + +
Sbjct: 137 INIGKNKDTPNEKAVSDYLLCLTRVYELASYVTVNTSSPNTQGLRDLQQEATLRRFISVL 196
Query: 168 VETRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
E + +L + P+L+KIAPDLS E IA+V+L + +DG+I +NTT+D
Sbjct: 197 REAQERLGSQQGRRKPMLLKIAPDLSEAELDSIAEVLL--RTGIDGVICTNTTIDHAAVA 254
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
D E GGLSG+PL ++ST +++ M+K +G++P+IGVGG+ G DA EK++ GASLV
Sbjct: 255 DDLRGNEAGGLSGKPLFDRSTAVLAGMHKRLQGRIPLIGVGGILDGSDAAEKMELGASLV 314
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Q+Y+ +Y GPPLV E+ Q+E N V
Sbjct: 315 QLYSGLIYRGPPLVAECVDEIRR--QREAANVV 345
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+LL + + ++A Y VN SSPNT LR LQ + L+ + + E + +L + P+
Sbjct: 154 YLLCLTRVYELASYVTVNTSSPNTQGLRDLQQEATLRRFISVLREAQERLGSQQGRRKPM 213
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
L+KIAPDLS E IA+V+L + + G++
Sbjct: 214 LLKIAPDLSEAELDSIAEVLLRTGIDGVI 242
>gi|359443607|ref|ZP_09233443.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20429]
gi|358034653|dbj|GAA69692.1| dihydroorotate dehydrogenase [Pseudoalteromonas sp. BSi20429]
Length = 336
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLIAKHNKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + + +++ +L++K +DG+I +NTT++R + +Y +E GGLSG P+
Sbjct: 214 MLVKIAPDLDQIQIEQVSESLLNNK--IDGVIATNTTLERAAVMGQQYAQEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +STE++SE+ +LT+GKLPIIGVGG+ A EK+ AGA+LVQ+YT F+Y GP LV
Sbjct: 272 RMRSTEVVSELKRLTQGKLPIIGVGGIDDATSAKEKLDAGANLVQVYTGFIYKGPQLVKS 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNGL 336
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLIAKHNKQVPMLVKIAPDLDQI 225
Query: 114 EKKDIADVVLDS-VKGIL 130
+ + +++ +L++ + G++
Sbjct: 226 QIEQVSESLLNNKIDGVI 243
>gi|426196732|gb|EKV46660.1| hypothetical protein AGABI2DRAFT_206093 [Agaricus bisporus var.
bisporus H97]
Length = 479
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 124/204 (60%), Gaps = 6/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ D + D + G+ FG VVNVSSPNT LR LQ K L+ LL+ V + R++L
Sbjct: 211 KESPLDSIDDYIAGVRTFGRHVDALVVNVSSPNTPGLRGLQNKGLLEKLLQGVSKARDEL 270
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
L P I++KIAPDL + DIA V +S +DG+IVSNTT+ R L K
Sbjct: 271 EPSTLTHGKPKIVLKIAPDLDDSQLADIAIAVRESG--IDGVIVSNTTLQRPASLKNPSK 328
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG P++ S + + ++ L +PIIG GG+++G+DA + K+GA +VQIYTS
Sbjct: 329 VEAGGLSGIPIKPISLKALRKLRSLLPASIPIIGAGGIWTGQDALDFAKSGAHMVQIYTS 388
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y+G RIK EL ELL++EG
Sbjct: 389 FGYNGVGTSRRIKDELVELLEREG 412
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----P 100
++ G+ FG VVNVSSPNT LR LQ K L+ LL+ V + R++L L P
Sbjct: 221 YIAGVRTFGRHVDALVVNVSSPNTPGLRGLQNKGLLEKLLQGVSKARDELEPSTLTHGKP 280
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
I++KIAPDL + DIA V +S + G++
Sbjct: 281 KIVLKIAPDLDDSQLADIAIAVRESGIDGVI 311
>gi|302879564|ref|YP_003848128.1| dihydroorotate dehydrogenase [Gallionella capsiferriformans ES-2]
gi|302582353|gb|ADL56364.1| dihydroorotate dehydrogenase [Gallionella capsiferriformans ES-2]
Length = 338
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 116/168 (69%), Gaps = 6/168 (3%)
Query: 136 AHYFVVNVSSPNTANLRKLQ---AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSL 192
A Y VN+SSPNT NLR+LQ A ++L LLKT + L K +P I +KIAPD+
Sbjct: 165 ASYITVNISSPNTKNLRQLQDEAALNELLSLLKTEQQKLADLHSKYVP-IALKIAPDMES 223
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
++ IA +++ + ++DG+I +NTT+ R + + +ETGGLSG P+R+KST +IS++
Sbjct: 224 EQITQIAGLLM--QHRIDGVIATNTTLSRAGVENLPHGDETGGLSGAPVRDKSTRVISQL 281
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
K +G LPIIGVGG+ SG DA EKIKAGASLVQIY+ +Y GP L++
Sbjct: 282 AKDLQGALPIIGVGGILSGDDAAEKIKAGASLVQIYSGLIYKGPALIS 329
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K A Y VN+SSPNT NLR+LQ + L LL + + +LA PI
Sbjct: 154 YLICLRKAYAHASYITVNISSPNTKNLRQLQDEAALNELLSLLKTEQQKLADLHSKYVPI 213
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPD+ ++ IA +++
Sbjct: 214 ALKIAPDMESEQITQIAGLLM 234
>gi|386814895|ref|ZP_10102113.1| Dihydroorotate dehydrogenase [Thiothrix nivea DSM 5205]
gi|386419471|gb|EIJ33306.1| Dihydroorotate dehydrogenase [Thiothrix nivea DSM 5205]
Length = 335
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 118/184 (64%), Gaps = 4/184 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
+ + V D + G+ K +AHY VN+SSPNT LRKLQ D LK+LL T+ E + +LA +
Sbjct: 146 VENAVDDYLIGLRKAYPLAHYITVNISSPNTPGLRKLQYGDDLKNLLHTLREEQAKLAQQ 205
Query: 178 --PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P+ +K+APDL+ E +D+A V S ++D LI +NTT+D+ ++ +E GG
Sbjct: 206 YGRYVPVAIKVAPDLNEAEIRDMALVF--SSVQIDALIATNTTLDKSSVEGLQHAQEQGG 263
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL STE+I + +PIIGVGG+ SG DA K++AGASLVQ+Y+ F+Y G
Sbjct: 264 LSGGPLTQHSTEVIRQFRTDMDSNIPIIGVGGILSGVDAKAKLEAGASLVQVYSGFIYRG 323
Query: 296 PPLV 299
P L+
Sbjct: 324 PELI 327
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+G+ K +AHY VN+SSPNT LRKLQ D LK+LL T+ E + +LA + P+
Sbjct: 153 YLIGLRKAYPLAHYITVNISSPNTPGLRKLQYGDDLKNLLHTLREEQAKLAQQYGRYVPV 212
Query: 103 LVKIAPDLSLDEKKDIADVVLDSVK 127
+K+APDL+ E +D+A +V SV+
Sbjct: 213 AIKVAPDLNEAEIRDMA-LVFSSVQ 236
>gi|88860168|ref|ZP_01134807.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas tunicata D2]
gi|88818162|gb|EAR27978.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas tunicata D2]
Length = 336
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPP 181
D + + K + A Y VN+SSPNT LR LQ + L LL ++ + L+ P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGEALDDLLSSLKNEQLNLSAHHNKHVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + +AD ++ K +DG+I +NTT++R RY +E GGLSG P+
Sbjct: 214 MLVKIAPDLDAIQIGQVADSLV--KNHIDGVIATNTTLERSAVTGQRYADEMGGLSGRPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R KST ++ E+ +LT KLPIIGVGG+ S + A EK+ AGASL+Q+YT F+Y GPP++
Sbjct: 272 REKSTHIVKELKRLTGDKLPIIGVGGIDSAQSAKEKLDAGASLIQVYTGFIYQGPPMIKT 331
Query: 302 IKSEL 306
I + L
Sbjct: 332 IVNAL 336
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ + L LL ++ + L+ P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGEALDDLLSSLKNEQLNLSAHHNKHVPMLVKIAPDLDAI 225
Query: 114 EKKDIAD-VVLDSVKGIL 130
+ +AD +V + + G++
Sbjct: 226 QIGQVADSLVKNHIDGVI 243
>gi|409081493|gb|EKM81852.1| hypothetical protein AGABI1DRAFT_70373 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 479
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 124/204 (60%), Gaps = 6/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ D + D + G+ FG VVNVSSPNT LR LQ K L+ LL+ V + R++L
Sbjct: 211 KESPLDSIDDYIAGVRTFGRHVDALVVNVSSPNTPGLRGLQNKGLLEKLLQGVSKARDEL 270
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
L P I++KIAPDL + DIA V +S +DG+IVSNTT+ R L K
Sbjct: 271 EPSTLIHGKPKIVLKIAPDLDDSQLADIAIAVRESG--IDGVIVSNTTLQRPASLKNPSK 328
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG P++ S + + ++ L +PIIG GG+++G+DA + K+GA +VQIYTS
Sbjct: 329 VEAGGLSGIPIKPISLKALRKLRSLLPASIPIIGAGGIWTGQDALDFAKSGAHMVQIYTS 388
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y+G RIK EL ELL++EG
Sbjct: 389 FGYNGVGTSRRIKDELVELLEREG 412
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----P 100
++ G+ FG VVNVSSPNT LR LQ K L+ LL+ V + R++L L P
Sbjct: 221 YIAGVRTFGRHVDALVVNVSSPNTPGLRGLQNKGLLEKLLQGVSKARDELEPSTLIHGKP 280
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
I++KIAPDL + DIA V +S + G++
Sbjct: 281 KIVLKIAPDLDDSQLADIAIAVRESGIDGVI 311
>gi|389848348|ref|YP_006350587.1| dihydroorotate dehydrogenase 2 [Haloferax mediterranei ATCC 33500]
gi|388245654|gb|AFK20600.1| dihydroorotate dehydrogenase 2 [Haloferax mediterranei ATCC 33500]
Length = 357
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 157/288 (54%), Gaps = 25/288 (8%)
Query: 46 LLGILKFGDVAHYFVVNVSS-PNTANLR----KLQAKDQLKHLLKTVVETRN----QLAL 96
+L L FG H V V++ P T N R +L + L + + E + +L+
Sbjct: 84 VLAALGFG---HVEVGGVTAKPQTGNPRPRMFRLPEDNGLINRMGLNNEGADAVGARLSA 140
Query: 97 KPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQA 156
P P I V + +L+L E + D + D A YFVVNVS PN+ R LQ
Sbjct: 141 GPHPDIPVGV--NLALSEVTPTEEAPEDYRYTYERVADGADYFVVNVSCPNSEGFRDLQN 198
Query: 157 KDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
+D L+ +L T+V+ P+LVK++PDL +D DVV + +DG+I SN
Sbjct: 199 RDSLEAILGTLVDAGAD-------PLLVKLSPDLPDPAVEDALDVV--DELDLDGIIASN 249
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT R + L + E GGLSG+P+ +++TE++ + + T +PI+GVGGV + A+
Sbjct: 250 TTTSRPDSLQNPNQAERGGLSGKPIESEATEMVRFIAERTD--VPIVGVGGVSDTESAYR 307
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
KI+AGAS+VQ+YT VY GP + I L E L+++G++SV AVGA
Sbjct: 308 KIRAGASMVQLYTGMVYEGPSIARDINRGLVERLEQDGFDSVEDAVGA 355
>gi|448616990|ref|ZP_21665700.1| dihydroorotate dehydrogenase 2 [Haloferax mediterranei ATCC 33500]
gi|445751645|gb|EMA03082.1| dihydroorotate dehydrogenase 2 [Haloferax mediterranei ATCC 33500]
Length = 351
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 157/288 (54%), Gaps = 25/288 (8%)
Query: 46 LLGILKFGDVAHYFVVNVSS-PNTANLR----KLQAKDQLKHLLKTVVETRN----QLAL 96
+L L FG H V V++ P T N R +L + L + + E + +L+
Sbjct: 78 VLAALGFG---HVEVGGVTAKPQTGNPRPRMFRLPEDNGLINRMGLNNEGADAVGARLSA 134
Query: 97 KPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQA 156
P P I V + +L+L E + D + D A YFVVNVS PN+ R LQ
Sbjct: 135 GPHPDIPVGV--NLALSEVTPTEEAPEDYRYTYERVADGADYFVVNVSCPNSEGFRDLQN 192
Query: 157 KDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSN 216
+D L+ +L T+V+ P+LVK++PDL +D DVV + +DG+I SN
Sbjct: 193 RDSLEAILGTLVDAGAD-------PLLVKLSPDLPDPAVEDALDVV--DELDLDGIIASN 243
Query: 217 TTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFE 276
TT R + L + E GGLSG+P+ +++TE++ + + T +PI+GVGGV + A+
Sbjct: 244 TTTSRPDSLQNPNQAERGGLSGKPIESEATEMVRFIAERTD--VPIVGVGGVSDTESAYR 301
Query: 277 KIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
KI+AGAS+VQ+YT VY GP + I L E L+++G++SV AVGA
Sbjct: 302 KIRAGASMVQLYTGMVYEGPSIARDINRGLVERLEQDGFDSVEDAVGA 349
>gi|258510974|ref|YP_003184408.1| dihydroorotate dehydrogenase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477700|gb|ACV58019.1| dihydroorotate dehydrogenase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 357
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 134/219 (61%), Gaps = 12/219 (5%)
Query: 110 LSLDEKKDIADVVL--DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + + D + + A Y +NVSSPNT LR LQ++ + LL+ +
Sbjct: 141 INIGKNKDTPNALAHEDYRAALEQVAPFADYLTINVSSPNTPGLRDLQSEAFILELLRAI 200
Query: 168 --VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVD-GLIVSNTTVDRYEY 224
+ +R++L P+ VK+APDL E + I D + S + GLI +NTTV R
Sbjct: 201 EPIRSRHRL------PVWVKLAPDLQNGEIERIVDALATSPFREHLGLICTNTTVQRPP- 253
Query: 225 LDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASL 284
L Y++E GGLSG PL +STE++ + + +LPIIG GGVF+ +DA+EKI++GASL
Sbjct: 254 LSGPYRDEAGGLSGRPLAARSTEVVRIAARAARRRLPIIGSGGVFTAEDAYEKIRSGASL 313
Query: 285 VQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
VQIYT+ +Y GP +V + L+ LL ++G+ +++ AVG
Sbjct: 314 VQIYTALIYRGPAVVGELVRGLDALLARDGFANIADAVG 352
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +NVSSPNT LR LQ++ + LL+ + R++ L P+ VK+APDL E
Sbjct: 169 ADYLTINVSSPNTPGLRDLQSEAFILELLRAIEPIRSRHRL----PVWVKLAPDLQNGEI 224
Query: 116 KDIADVVLDS 125
+ I D + S
Sbjct: 225 ERIVDALATS 234
>gi|220906261|ref|YP_002481572.1| Dihydroorotate oxidase [Cyanothece sp. PCC 7425]
gi|254788882|sp|B8HW33.1|PYRD_CYAP4 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|219862872|gb|ACL43211.1| Dihydroorotate oxidase [Cyanothece sp. PCC 7425]
Length = 375
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 130/204 (63%), Gaps = 17/204 (8%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L S + + +GD YFV+NVSSPNT LR LQ L+ +L + ++ NQ A +PL
Sbjct: 176 LGSFRLLQAWGD---YFVINVSSPNTPGLRSLQTAANLEPIL-SALQNENQ-ARRPL--- 227
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY-------LDARYKEETGG 235
L+KI+PDL+ ++ I D+V + GLI +NTT+ R E +EE GG
Sbjct: 228 LLKISPDLAWEDLATIIDLV--KTYQWAGLIATNTTIARPELQTKVIPQTGKSPQEEAGG 285
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+ +STE+I +++ T G+LPIIGVGGVF+ DA+EKI AGA+L+Q+YT ++Y G
Sbjct: 286 LSGAPLKQRSTEVIRFIHQQTGGQLPIIGVGGVFTAADAWEKIMAGATLIQVYTGWIYEG 345
Query: 296 PPLVTRIKSELEELLQKEGYNSVS 319
P +V ++ + L+ LQ+ G + ++
Sbjct: 346 PGMVKQLLTGLQTELQQRGLDCLA 369
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 20/95 (21%)
Query: 28 HNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 87
+ L SF ++AW GD YFV+NVSSPNT LR LQ L+ +L +
Sbjct: 173 EDYLGSFRLLQAW------------GD---YFVINVSSPNTPGLRSLQTAANLEPIL-SA 216
Query: 88 VETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
++ NQ A +PL L+KI+PDL+ ++ I D+V
Sbjct: 217 LQNENQ-ARRPL---LLKISPDLAWEDLATIIDLV 247
>gi|336254418|ref|YP_004597525.1| dihydroorotate dehydrogenase [Halopiger xanaduensis SH-6]
gi|335338407|gb|AEH37646.1| Dihydroorotate dehydrogenase [Halopiger xanaduensis SH-6]
Length = 356
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 19/289 (6%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPL 99
L+ G ++ G V Y P LR+ +A +++ + + + +L
Sbjct: 79 ALEALGFGFVEIGTVTPYPQEGNDRPRLFRLREDEAMVNRMGFNGQGMERVKARLEEDGT 138
Query: 100 P--PILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
P P+ V + S E++ I D V D + A Y VVNVS PNT +
Sbjct: 139 PNVPLGVNVGKMNSSSEEEAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEA 192
Query: 156 AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ + L+ + +T+ E N V PILVKI PD + D+ D+V + +DG+I +
Sbjct: 193 SPEHLRAIFETL-EAENDADV----PILVKIGPDEPENAVLDLVDIV--QEFGLDGMIAT 245
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NT+ R E L + +EE GGLSG+P+ ++ST++I + T G LPIIGVGGV S A+
Sbjct: 246 NTSTGR-EGLASPNREEWGGLSGKPIEDRSTDVIRTIADYTDGDLPIIGVGGVDSAASAY 304
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
KI+AGASLVQ+YT FVY GP RI + L ELL+++G++S+ AVGA
Sbjct: 305 RKIRAGASLVQLYTGFVYRGPSTAKRINNGLVELLERDGFSSIEDAVGA 353
>gi|394987856|ref|ZP_10380695.1| dihydroorotate dehydrogenase [Sulfuricella denitrificans skB26]
gi|393793075|dbj|GAB70334.1| dihydroorotate dehydrogenase [Sulfuricella denitrificans skB26]
Length = 346
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 115/174 (66%), Gaps = 4/174 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ D+L++LL + + LA + P+ +KIAPDL +
Sbjct: 165 ASYVTVNISSPNTKNLRQLQQSDELENLLAALKAEQKTLAEQHGKYVPLALKIAPDLDTE 224
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ IAD++L K ++DG+I +NTT+ R + + EETGGLSG P+R KS +I ++
Sbjct: 225 QIIMIADLLL--KYQIDGVIATNTTIGREGVENLPHAEETGGLSGAPVRQKSNAVIKQLS 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+GK+PIIGVGG+ +G DA EKI+ GASLVQ Y+ F+Y GP L+ E++
Sbjct: 283 IALQGKIPIIGVGGIMNGLDAAEKIQVGASLVQFYSGFIYRGPELIAEAVREID 336
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT NLR+LQ D+L++LL + + LA + P+
Sbjct: 154 YLICLRKVYPYASYVTVNISSPNTKNLRQLQQSDELENLLAALKAEQKTLAEQHGKYVPL 213
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPDL ++ IAD++L
Sbjct: 214 ALKIAPDLDTEQIIMIADLLL 234
>gi|22298122|ref|NP_681369.1| dihydroorotate dehydrogenase 2 [Thermosynechococcus elongatus BP-1]
gi|30173269|sp|Q8DLB7.1|PYRD_THEEB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|22294300|dbj|BAC08131.1| dihydroorotate dehydrogenase [Thermosynechococcus elongatus BP-1]
Length = 364
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 125/205 (60%), Gaps = 16/205 (7%)
Query: 100 PPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 159
PP + I +L + +A D + + + YFV+NVSSPNT LR LQAK+Q
Sbjct: 147 PPASIPIGINLGKSKITPLAAAKEDYLASFRRLHPLGDYFVINVSSPNTPGLRDLQAKEQ 206
Query: 160 LKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTV 219
L +L+T+ Q A P P+L+KIAPDLS ++ I D+V ++ G++ +NTTV
Sbjct: 207 LAPILETL-----QSANHPRKPLLLKIAPDLSWEQIAAILDLV--QAYELAGIVATNTTV 259
Query: 220 DRYEYLDARY--------KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
R E L ++ EE GGLSG PLR ++T +I +++ T+G LPIIGVGG+F+
Sbjct: 260 AR-EGLKSQTIPQTGRSPAEEAGGLSGAPLRQRATAVIRFIHEQTQGTLPIIGVGGIFTP 318
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGP 296
+D EK+ AGA+LVQ+YT ++Y GP
Sbjct: 319 EDVIEKLAAGATLVQLYTGWIYQGP 343
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + + YFV+NVSSPNT LR LQAK+QL +L+T+ Q A P P+L+
Sbjct: 172 YLASFRRLHPLGDYFVINVSSPNTPGLRDLQAKEQLAPILETL-----QSANHPRKPLLL 226
Query: 105 KIAPDLSLDEKKDIADVV 122
KIAPDLS ++ I D+V
Sbjct: 227 KIAPDLSWEQIAAILDLV 244
>gi|254471995|ref|ZP_05085396.1| dihydroorotate oxidase [Pseudovibrio sp. JE062]
gi|211959197|gb|EEA94396.1| dihydroorotate oxidase [Pseudovibrio sp. JE062]
Length = 367
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 9/209 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LA 175
D V D V G+ +F ++A Y N+SSPNT LR LQ KD L HLL +V R++ L
Sbjct: 151 DRVADYVLGVKRFAELADYLTANISSPNTPGLRDLQEKDALAHLLSAIVNARDEQEDRLG 210
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETG 234
K P+++KIAPD++ + K+IA+VV+ +K VDG+IVSNTT+ R L D + EE G
Sbjct: 211 RKV--PVMLKIAPDVTEEALKEIAEVVMTNK--VDGMIVSNTTIARPSTLKDQQQAEEAG 266
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL ++T +++ + LP+ GVGGV + + A KI AGA+ +Q+Y+ VY
Sbjct: 267 GLSGAPLFERATIALAKTRRAVGPDLPLFGVGGVDTPEKAAAKIFAGANQIQLYSGMVYE 326
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVG 323
G LV +I L L+ G +++ + VG
Sbjct: 327 GQTLVKKINKHLSRLVAARGVSNLQELVG 355
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++LG+ +F ++A Y N+SSPNT LR LQ KD L HLL +V R++ L P+
Sbjct: 156 YVLGVKRFAELADYLTANISSPNTPGLRDLQEKDALAHLLSAIVNARDEQEDRLGRKVPV 215
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
++KIAPD++ + K+IA+VV+ + V G++
Sbjct: 216 MLKIAPDVTEEALKEIAEVVMTNKVDGMI 244
>gi|254786427|ref|YP_003073856.1| dihydroorotate dehydrogenase 2 [Teredinibacter turnerae T7901]
gi|259547566|sp|C5BKZ2.1|PYRD_TERTT RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|237686744|gb|ACR14008.1| dihydroorotate oxidase [Teredinibacter turnerae T7901]
Length = 339
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 145/272 (53%), Gaps = 31/272 (11%)
Query: 44 FWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ-------------LKHLLKTVVET 90
F LG L FG V V + P R + ++ + HL+ V
Sbjct: 70 FNALGQLGFGSVEVGTVTPLPQPGNPQPRLFRLIEEEGIINRMGFNNKGVAHLVAAVARR 129
Query: 91 RNQLALKPLPPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNT 148
R + L + I + + E++ ++D +D+V + A Y +N+SSPNT
Sbjct: 130 RYRGVLG------INIGKNKATPEEQALSDYEKCMDAVY------ESADYIAINISSPNT 177
Query: 149 ANLRKLQAKDQLKHLLKTVVETRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSK 206
LR LQ + L HLL+ + + L A PI VKIAPD++ DE K +AD ++ ++
Sbjct: 178 PGLRNLQFGENLSHLLQGIKRRQALLHEATGKRVPIAVKIAPDMTDDEIKGVADALVSNQ 237
Query: 207 CKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVG 266
+ +I +NTTV R E + +KEE GGLSG P+ KST +I + + +G +PIIGVG
Sbjct: 238 --YEAVIATNTTVSRDEVPHSPHKEEMGGLSGRPVAEKSTHVIRVLAEHMQGAMPIIGVG 295
Query: 267 GVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
G+ +G DA EKI+AGASLVQ+Y+ F+Y GP L
Sbjct: 296 GIMTGADAEEKIRAGASLVQLYSGFIYRGPAL 327
>gi|347536515|ref|YP_004843940.1| dihydroorotate oxidase [Flavobacterium branchiophilum FL-15]
gi|345529673|emb|CCB69703.1| Dihydroorotate oxidase [Flavobacterium branchiophilum FL-15]
Length = 339
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL + N L + PI++KIAPDLS ++ D
Sbjct: 172 YFVVNVSSPNTPNLRALQEKEPLKKLLLQL--ENNPLQHQNHKPIVLKIAPDLSNEQLID 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I ++V +++ + G+I +NTT+ R + L + + E GGLSG+PLR+++TE+I + + +
Sbjct: 230 IIEIVQETQ--IAGVIATNTTIAR-DGLTSENRHENGGLSGKPLRDRATEVIRFLSEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ S DA EK++AGASLVQ+YT F+Y GP L+ +I + L
Sbjct: 287 KSFPIIGVGGIHSAADALEKLEAGASLVQLYTGFIYEGPALIKQINNAL 335
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ LK LL + N L + PI++KIAPDLS ++ D
Sbjct: 172 YFVVNVSSPNTPNLRALQEKEPLKKLLLQL--ENNPLQHQNHKPIVLKIAPDLSNEQLID 229
Query: 118 IADVVLDS-VKGIL 130
I ++V ++ + G++
Sbjct: 230 IIEIVQETQIAGVI 243
>gi|448351839|ref|ZP_21540633.1| dihydroorotate dehydrogenase 2 [Natrialba taiwanensis DSM 12281]
gi|445632399|gb|ELY85611.1| dihydroorotate dehydrogenase 2 [Natrialba taiwanensis DSM 12281]
Length = 356
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 150/287 (52%), Gaps = 27/287 (9%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQA-------KDQLKHLLKTVVETRNQLALKPL 99
G ++ G V Y P LR+ +A Q +K+ +ET P
Sbjct: 85 FGFVEIGTVTPYSQGGNDRPRLFRLREDEAMVNRMGFNGQGMERVKSRLETDG----TPD 140
Query: 100 PPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAK 157
P+ V I S E++ + D V D + A Y VVNVS PNT + +
Sbjct: 141 FPLGVNIGKMNSSTEREAVEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEASP 194
Query: 158 DQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNT 217
D L+ + +T+ E N V PILVK+ PD + ++ D+V +DG++ +NT
Sbjct: 195 DHLREIFETL-EAENDADV----PILVKVGPDEPAESILELVDIV--RAFDLDGIVATNT 247
Query: 218 TVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
+ R E L + +EE GGLSG+PL +ST +I + T G LPIIGVGGV S A+ K
Sbjct: 248 STGR-ENLASPRREEWGGLSGKPLEERSTAVIRTIADHTDGDLPIIGVGGVDSAASAYRK 306
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
I+AGASLVQ+YT FVY GP RI L +LL+++G++SV+ AVGA
Sbjct: 307 IRAGASLVQLYTGFVYQGPSTAKRINRGLVDLLERDGFDSVADAVGA 353
>gi|220917761|ref|YP_002493065.1| dihydroorotate dehydrogenase 2 [Anaeromyxobacter dehalogenans
2CP-1]
gi|254788872|sp|B8JDF0.1|PYRD_ANAD2 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|219955615|gb|ACL65999.1| Dihydroorotate oxidase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 364
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D + I + A Y VVN+SSPNT LR+LQ +D L LL+ V R+ P
Sbjct: 153 DAAADYLACIERLHPYADYLVVNISSPNTPGLRQLQERDALDRLLRACV--RHLAERAPG 210
Query: 180 PPILVKIAPDLS---LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGL 236
P+LVK+APDLS LDE D+A + +S V+R+ E GGL
Sbjct: 211 KPLLVKLAPDLSPEALDEAVDVAIAAGAAGIVATNTTLSRAGVERHPR-----AAEAGGL 265
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG PL +T+++ Y G++PI+GVGGV + A+ KI+AGA+LVQ YT +Y GP
Sbjct: 266 SGAPLERLATDVVRRCYARAAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGP 325
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
V R+ + L LL+++G++++S AVGA H+
Sbjct: 326 AFVGRVNAGLARLLERDGFSTLSDAVGADHR 356
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L I + A Y VVN+SSPNT LR+LQ +D L LL+ V R+ P P+LV
Sbjct: 158 YLACIERLHPYADYLVVNISSPNTPGLRQLQERDALDRLLRACV--RHLAERAPGKPLLV 215
Query: 105 KIAPDLS---LDE 114
K+APDLS LDE
Sbjct: 216 KLAPDLSPEALDE 228
>gi|149280366|ref|ZP_01886487.1| dihydroorotate dehydrogenase [Pedobacter sp. BAL39]
gi|149228915|gb|EDM34313.1| dihydroorotate dehydrogenase [Pedobacter sp. BAL39]
Length = 342
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 119/184 (64%), Gaps = 5/184 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D +K + DV YFVVNVSSPNT LR LQ K+ L H+L T+ + + +
Sbjct: 158 EAVNDYIKCFDRLFDVVDYFVVNVSSPNTPGLRALQEKEPLMHILNTLQQRNQKDGISR- 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE-YLDARYKEETGGLSG 238
PIL+KIAPDL+ ++ DI ++V+++ + G+I +NTT+DR + E GGLSG
Sbjct: 217 -PILLKIAPDLTNEQLDDIVEIVMETG--IAGVIATNTTIDRTGLHTKESVLNEAGGLSG 273
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+PL +STE++ + + + PIIGVGG+ S +DA EK+ AGASLVQ+YT F+Y GP +
Sbjct: 274 KPLTKRSTEVVRYLSEKSNKAFPIIGVGGIHSPEDAKEKLDAGASLVQLYTGFIYEGPGI 333
Query: 299 VTRI 302
V RI
Sbjct: 334 VKRI 337
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT LR LQ K+ L H+L T+ + + + PIL+KIAPDL+ +
Sbjct: 172 DVVDYFVVNVSSPNTPGLRALQEKEPLMHILNTLQQRNQKDGIS--RPILLKIAPDLTNE 229
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V+++ + G++
Sbjct: 230 QLDDIVEIVMETGIAGVI 247
>gi|344229172|gb|EGV61058.1| dihydroorotate dehydrogenase precursor [Candida tenuis ATCC 10573]
Length = 409
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 124/205 (60%), Gaps = 8/205 (3%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ R+ L
Sbjct: 198 KNKFGDEVEDYVKGVQRLGPYADVLVVNVSSPNTPGLRDLQSESKLTNLLTTVVKERD-L 256
Query: 175 AVKPL--PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-- 230
P PP+LVKIAPDL+ E + IA S +DG+IVSNTT+ R L +
Sbjct: 257 VKNPYGKPPVLVKIAPDLTEPEIESIASSAKQSG--IDGVIVSNTTIQRPANLRSSPDLI 314
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+TGGLSG P++ + + + + K TK L +IG GG+ SGKDA E KAGA+ VQ YT
Sbjct: 315 SQTGGLSGAPVKPFALQALRTLRKHTKDSNLVLIGCGGISSGKDALEFGKAGATFVQFYT 374
Query: 290 SFVYHGPPLVTRIKSELEELLQKEG 314
+F Y GP L +I+ EL L KEG
Sbjct: 375 AFAYKGPGLPGKIRDELLAELSKEG 399
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPI 102
++ G+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ R+ L P PP+
Sbjct: 208 YVKGVQRLGPYADVLVVNVSSPNTPGLRDLQSESKLTNLLTTVVKERD-LVKNPYGKPPV 266
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLR 152
LVKIAPDL+ E + IA S + G++ V N + ANLR
Sbjct: 267 LVKIAPDLTEPEIESIASSAKQSGIDGVI---------VSNTTIQRPANLR 308
>gi|289583104|ref|YP_003481570.1| dihydroorotate dehydrogenase [Natrialba magadii ATCC 43099]
gi|448283430|ref|ZP_21474706.1| dihydroorotate dehydrogenase 2 [Natrialba magadii ATCC 43099]
gi|289532657|gb|ADD07008.1| dihydroorotate dehydrogenase [Natrialba magadii ATCC 43099]
gi|445574346|gb|ELY28849.1| dihydroorotate dehydrogenase 2 [Natrialba magadii ATCC 43099]
Length = 356
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 19/289 (6%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQA---KDQLKHLLKTVVETRNQLALK 97
L+ G ++ G V Y P LR+ +A + V+ R +
Sbjct: 79 ALEALGFGFVEIGTVTPYSQDGNDRPRLFRLREDEAMVNRMGFNGQGMEAVKARLEEDGT 138
Query: 98 PLPPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
P P+ V I S E++ I D V D + A Y VVNVS PNT +
Sbjct: 139 PGFPLGVNIGKMNSSTEREAIEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEA 192
Query: 156 AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ + L+ + +T+ + N L V PILVKI PD + D+ D+V + VDG++ +
Sbjct: 193 SPEHLREIFETI-DAENDLDV----PILVKIGPDEPEESILDLVDIV--QEFDVDGIVAT 245
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NT+ R E L + +EE GGLSG+P+ +ST +I + T G LPIIGVGGV S A+
Sbjct: 246 NTSTAR-EGLASAKREEWGGLSGKPVEGRSTAVIRTIADHTDGDLPIIGVGGVDSAASAY 304
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
KI+AGASLVQ+YT FVY GP RI L LL+++G+ S+ +AVGA
Sbjct: 305 RKIRAGASLVQLYTGFVYQGPSTAKRINRGLVRLLERDGFTSIEEAVGA 353
>gi|152995764|ref|YP_001340599.1| dihydroorotate oxidase [Marinomonas sp. MWYL1]
gi|189038430|sp|A6VW35.1|PYRD_MARMS RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|150836688|gb|ABR70664.1| Dihydroorotate oxidase [Marinomonas sp. MWYL1]
Length = 346
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 118/186 (63%), Gaps = 7/186 (3%)
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--Q 173
+D A L ++ ++ + D Y N+SSPNT LR LQ + L L+ +V R+ +
Sbjct: 148 EDAAADYLACLESVIPYAD---YITANISSPNTPGLRSLQFGESLAQLIAPLVAARDRYE 204
Query: 174 LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET 233
A P+ VKIAPD++ DE K +AD ++D VDG+I +NTT+ R L ++++E
Sbjct: 205 AAYGKRVPLAVKIAPDMTDDEIKMVADTLVDQG--VDGIIATNTTLSREAVLGHQFEKEA 262
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GGLSG P+R+ ST ++ + + K LPIIGVGG+ SG DA EK++AGA LVQIY+ F+Y
Sbjct: 263 GGLSGMPVRDASTHVVKVLAEHLKDTLPIIGVGGISSGADAVEKLQAGARLVQIYSGFIY 322
Query: 294 HGPPLV 299
HGP L+
Sbjct: 323 HGPELI 328
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 9 CSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNT 68
SRI S + G G N+ +S A L L ++ + D Y N+SSPNT
Sbjct: 123 VSRIKSHRY-PGVLGVNIGKNLTTSVEDAAADYLA-CLESVIPYAD---YITANISSPNT 177
Query: 69 ANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPILVKIAPDLSLDEKKDIADVVLD-S 125
LR LQ + L L+ +V R+ + A P+ VKIAPD++ DE K +AD ++D
Sbjct: 178 PGLRSLQFGESLAQLIAPLVAARDRYEAAYGKRVPLAVKIAPDMTDDEIKMVADTLVDQG 237
Query: 126 VKGILKFGD-------VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
V GI+ + H F L + +D H++K + E
Sbjct: 238 VDGIIATNTTLSREAVLGHQF-----EKEAGGLSGMPVRDASTHVVKVLAE 283
>gi|344229173|gb|EGV61059.1| hypothetical protein CANTEDRAFT_116277 [Candida tenuis ATCC 10573]
Length = 389
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 124/205 (60%), Gaps = 8/205 (3%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D VKG+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ R+ L
Sbjct: 178 KNKFGDEVEDYVKGVQRLGPYADVLVVNVSSPNTPGLRDLQSESKLTNLLTTVVKERD-L 236
Query: 175 AVKPL--PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-- 230
P PP+LVKIAPDL+ E + IA S +DG+IVSNTT+ R L +
Sbjct: 237 VKNPYGKPPVLVKIAPDLTEPEIESIASSAKQSG--IDGVIVSNTTIQRPANLRSSPDLI 294
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+TGGLSG P++ + + + + K TK L +IG GG+ SGKDA E KAGA+ VQ YT
Sbjct: 295 SQTGGLSGAPVKPFALQALRTLRKHTKDSNLVLIGCGGISSGKDALEFGKAGATFVQFYT 354
Query: 290 SFVYHGPPLVTRIKSELEELLQKEG 314
+F Y GP L +I+ EL L KEG
Sbjct: 355 AFAYKGPGLPGKIRDELLAELSKEG 379
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL--PPI 102
++ G+ + G A VVNVSSPNT LR LQ++ +L +LL TVV+ R+ L P PP+
Sbjct: 188 YVKGVQRLGPYADVLVVNVSSPNTPGLRDLQSESKLTNLLTTVVKERD-LVKNPYGKPPV 246
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLR 152
LVKIAPDL+ E + IA S + G++ V N + ANLR
Sbjct: 247 LVKIAPDLTEPEIESIASSAKQSGIDGVI---------VSNTTIQRPANLR 288
>gi|87198219|ref|YP_495476.1| dihydroorotate dehydrogenase 2 [Novosphingobium aromaticivorans DSM
12444]
gi|123491051|sp|Q2GBY1.1|PYRD_NOVAD RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|87133900|gb|ABD24642.1| dihydroorotate oxidase A [Novosphingobium aromaticivorans DSM
12444]
Length = 349
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 128/221 (57%), Gaps = 19/221 (8%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D +A Y VN+SSPNT LR LQ + L LL V+E
Sbjct: 141 VNIGANKDSADRIADYALMTRLMAPLASYLTVNISSPNTPGLRALQDEGALAALLDAVIE 200
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVD------GLIVSNTTVDRYE 223
R + P+ +K+APDL E DI DS C++ LI+SNTT+ R
Sbjct: 201 ARGNMTT----PVFLKLAPDL---EPADI-----DSICRIAIEKQLAALIISNTTITR-P 247
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
L + + E GGLSG PLR + + + + K + G +P++GVGG+ + DA+E+I+AGAS
Sbjct: 248 VLRSAHAGEAGGLSGAPLRELALQRLRDFRKASGGAIPLVGVGGIATVDDAWERIRAGAS 307
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
L+QIY++ VY GP L R+ + LE +++ G S+++AVG+
Sbjct: 308 LIQIYSAMVYEGPGLARRLVAGLERKVREAGLTSIAEAVGS 348
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
+A Y VN+SSPNT LR LQ + L LL V+E R + P+ +K+APDL +
Sbjct: 166 LASYLTVNISSPNTPGLRALQDEGALAALLDAVIEARGNMTT----PVFLKLAPDLEPAD 221
Query: 115 KKDIADVVLD 124
I + ++
Sbjct: 222 IDSICRIAIE 231
>gi|225166418|ref|ZP_03728079.1| Dihydroorotate oxidase [Diplosphaera colitermitum TAV2]
gi|224799339|gb|EEG17905.1| Dihydroorotate oxidase [Diplosphaera colitermitum TAV2]
Length = 351
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 119/188 (63%), Gaps = 6/188 (3%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
+L + + + V D +K D A Y +NVSSPNT +LRKLQ KD+L+ +L+ +
Sbjct: 152 NLGKSKVASLEEAVGDYLKSFALLADHADYVAINVSSPNTPDLRKLQEKDRLEGVLRALC 211
Query: 169 ETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
E AV+ P+L+KIAPDLS + D+ + +L +DG+I +NTT+ R + +
Sbjct: 212 EANAARAVRR--PLLLKIAPDLSWSQIDDVLETILG--LGLDGIIATNTTLARPGFFET- 266
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
ETGGLSG P+ ++TE+I+ + + T+G+LPIIGVGG+ + A EK+ AGASLVQ+Y
Sbjct: 267 -VNETGGLSGAPVERRATEIINYISRATQGRLPIIGVGGIMDVRGACEKLDAGASLVQVY 325
Query: 289 TSFVYHGP 296
T +Y GP
Sbjct: 326 TGMIYRGP 333
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D A Y +NVSSPNT +LRKLQ KD+L+ +L+ + E A++ P+L+KIAPDLS
Sbjct: 177 DHADYVAINVSSPNTPDLRKLQEKDRLEGVLRALCEANAARAVR--RPLLLKIAPDLSWS 234
Query: 114 EKKDIADVVL 123
+ D+ + +L
Sbjct: 235 QIDDVLETIL 244
>gi|254796568|ref|YP_003081404.1| dihydroorotate oxidase [Neorickettsia risticii str. Illinois]
gi|254589806|gb|ACT69168.1| dihydroorotate oxidase [Neorickettsia risticii str. Illinois]
Length = 348
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 16/244 (6%)
Query: 80 LKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYF 139
+ + LK++ R + LPP+ V I + ++ V D + VA Y
Sbjct: 118 IAYFLKSL---RKAMTHPDLPPLGVNIG------KNAVSSNPVSDYARLAAHVSSVADYI 168
Query: 140 VVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIA 199
+N+SSPNT +LR +Q + L+ LL V + AV I +K+APDL+ E ++
Sbjct: 169 TLNISSPNTVSLRDMQKVEILEELLIAV-----KAAVGSNVRIFIKVAPDLT--EGAEVG 221
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
V L K KV G+IVSNTT+ E L +++K E GGLSG PL ST L+ +MY+ G+
Sbjct: 222 IVSLALKHKVAGIIVSNTTIGCRESLHSKHKVEYGGLSGMPLFKLSTGLLRKMYRCANGE 281
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVS 319
L IG GG+ + A+ KI+ GA+L+Q YTSF YHG L+ +IK +L + L+ +G++SVS
Sbjct: 282 LAFIGCGGISDAETAYAKIRNGAALIQAYTSFTYHGFGLLNQIKKDLVQRLKADGFSSVS 341
Query: 320 QAVG 323
+A+G
Sbjct: 342 EAIG 345
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 27 THNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKT 86
+ N +S +AR+ A V VA Y +N+SSPNT +LR +Q + L+ LL
Sbjct: 147 SSNPVSDYARLAAHV-----------SSVADYITLNISSPNTVSLRDMQKVEILEELLIA 195
Query: 87 VVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
V + A+ I +K+APDL+ + I + L V GI+
Sbjct: 196 V-----KAAVGSNVRIFIKVAPDLTEGAEVGIVSLALKHKVAGII 235
>gi|170087998|ref|XP_001875222.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650422|gb|EDR14663.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 499
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 123/204 (60%), Gaps = 6/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K+ AD + D V G+ FG + VVNVSSPNT LR LQ +D L+ LL V + R++L
Sbjct: 221 KESPADSIDDFVTGVRTFGPYSDVLVVNVSSPNTPGLRGLQNRDVLERLLDGVTKARDEL 280
Query: 175 AVKPL----PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
+ L P +++K APDL+ E DIADV+ +S +DG+IVSNTTV R + L K
Sbjct: 281 SPSVLTFRKPKLVLKFAPDLNESELADIADVIRNSS--IDGVIVSNTTVQRPKSLVNPNK 338
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
E GGLSG P++ S + + + +P+IG GG+ +G DA E KAGAS+VQ+YT
Sbjct: 339 SEMGGLSGPPVKPLSLKALRILRGHLPASIPLIGCGGISTGADALEFAKAGASMVQVYTG 398
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y G RIK ++ + L +EG
Sbjct: 399 FGYDGVGACRRIKDQVVDELTREG 422
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 7 STCSRILSRV--FRSG------EWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHY 58
S SRI SR+ F SG GC N L A + ++ G+ FG +
Sbjct: 186 SVLSRIRSRIPPFTSGPNRASLREGCLLAVN-LGKNKESPADSIDDFVTGVRTFGPYSDV 244
Query: 59 FVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----PPILVKIAPDLSLDE 114
VVNVSSPNT LR LQ +D L+ LL V + R++L+ L P +++K APDL+ E
Sbjct: 245 LVVNVSSPNTPGLRGLQNRDVLERLLDGVTKARDELSPSVLTFRKPKLVLKFAPDLNESE 304
Query: 115 KKDIADVVLD-SVKGIL 130
DIADV+ + S+ G++
Sbjct: 305 LADIADVIRNSSIDGVI 321
>gi|403176480|ref|XP_003335132.2| hypothetical protein PGTG_16739 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172268|gb|EFP90713.2| hypothetical protein PGTG_16739 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 638
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K A+ V D G+ +FG +A VVNVSSPNT LR LQ+KD LL VV R+QL
Sbjct: 304 KNSPAESVEDFRLGVERFGSLADVLVVNVSSPNTPGLRGLQSKDAFDRLLSDVVRARDQL 363
Query: 175 AV----KP-LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
KP P +LVKIAPDLS+ E DI V + KVDG+I+SNTT R
Sbjct: 364 PSTTNSKPNRPAVLVKIAPDLSVQELVDIGTVA--KQAKVDGIIISNTTTSRPAGSGTEP 421
Query: 230 K-EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
+ETGGLSG PL+ + + +S +Y T+G +P++G GG+ + +D E +AGAS VQ+Y
Sbjct: 422 GIKETGGLSGPPLKPLALKALSIVYAATEGAIPLVGCGGIKAAEDVLEYGRAGASFVQLY 481
Query: 289 TSFVYHGPPLVTRIKSELEELL--QKEGYNSVSQAVGA 324
++ Y G L +K L ELL Q++G N SQ VG+
Sbjct: 482 SALTYQGIGLPRTLKDRLAELLRTQEDGKN-WSQIVGS 518
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA----LKP-L 99
+ LG+ +FG +A VVNVSSPNT LR LQ+KD LL VV R+QL KP
Sbjct: 314 FRLGVERFGSLADVLVVNVSSPNTPGLRGLQSKDAFDRLLSDVVRARDQLPSTTNSKPNR 373
Query: 100 PPILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
P +LVKIAPDLS+ E DI V + V GI+
Sbjct: 374 PAVLVKIAPDLSVQELVDIGTVAKQAKVDGII 405
>gi|421497822|ref|ZP_15944970.1| Dihydroorotate dehydrogenase [Aeromonas media WS]
gi|407183145|gb|EKE57054.1| Dihydroorotate dehydrogenase [Aeromonas media WS]
Length = 336
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 130/227 (57%), Gaps = 14/227 (6%)
Query: 82 HLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVV 141
HL+ V E + Q + I + D +++ KD + +D V D A Y V
Sbjct: 122 HLVAKVKEAKYQGVIG----INIGKNKDTPIEQGKDDYLICMDKVY------DHAGYIAV 171
Query: 142 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLDEKKDIA 199
N+SSPNT LR LQ + L LL + + +LA K P+ VKIAPDLSLDE +A
Sbjct: 172 NISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPLAVKIAPDLSLDEINQVA 231
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
++ K +DG+I +NTT++R D + E GGLSG PL++KSTE+I + K G
Sbjct: 232 ASLI--KNGIDGVIATNTTLERDMIYDMPHAGEAGGLSGRPLQHKSTEVIRLLAKALNGA 289
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
LPIIGVGG+ S A EK+ AGASLVQIY+ F+Y GP LV I + +
Sbjct: 290 LPIIGVGGIDSAMAAREKLAAGASLVQIYSGFIYKGPSLVKEIVTHI 336
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDLSLDE + A ++ + + G++
Sbjct: 215 AVKIAPDLSLDEINQVAASLIKNGIDGVI 243
>gi|373853800|ref|ZP_09596599.1| Dihydroorotate dehydrogenase [Opitutaceae bacterium TAV5]
gi|391228062|ref|ZP_10264269.1| dihydroorotate dehydrogenase, subfamily 2 [Opitutaceae bacterium
TAV1]
gi|372473327|gb|EHP33338.1| Dihydroorotate dehydrogenase [Opitutaceae bacterium TAV5]
gi|391223555|gb|EIQ01975.1| dihydroorotate dehydrogenase, subfamily 2 [Opitutaceae bacterium
TAV1]
Length = 355
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 6/207 (2%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
+ + +L + + + V D + D A Y +NVSSPNT +LRKLQ KD+L+ +
Sbjct: 147 IPVGVNLGKSKVASLEEAVGDYLTSFGLLADHADYIAINVSSPNTPDLRKLQEKDRLEGV 206
Query: 164 LKTVVETRNQLAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
L+ + E A KP PIL+KIAPDLS + D+ + +L +DG+I +NTT+ R
Sbjct: 207 LRALCEANAARATAGKPRRPILLKIAPDLSWQQIDDVLETLLG--LGLDGIIATNTTLAR 264
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
+ ETGGLSG P+R +STE+I + + T G+LPIIGVGG+ K A EK+ AG
Sbjct: 265 PGWFAT--VNETGGLSGAPVRERSTEIIKYISRATHGRLPIIGVGGIMDTKAACEKMDAG 322
Query: 282 ASLVQIYTSFVYHGPPLVTRIKSELEE 308
ASLVQIYT +Y G ++ L +
Sbjct: 323 ASLVQIYTGMIYRGAFFAAQLARALAD 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR--NQLALKPLPPILVKIAPDLS 111
D A Y +NVSSPNT +LRKLQ KD+L+ +L+ + E A KP PIL+KIAPDLS
Sbjct: 177 DHADYIAINVSSPNTPDLRKLQEKDRLEGVLRALCEANAARATAGKPRRPILLKIAPDLS 236
Query: 112 LDEKKDIADVVL 123
+ D+ + +L
Sbjct: 237 WQQIDDVLETLL 248
>gi|448730981|ref|ZP_21713284.1| dihydroorotate dehydrogenase 2 [Halococcus saccharolyticus DSM
5350]
gi|445792575|gb|EMA43176.1| dihydroorotate dehydrogenase 2 [Halococcus saccharolyticus DSM
5350]
Length = 350
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 119/190 (62%), Gaps = 11/190 (5%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
YFVVNVSSPNT LR LQ +D L+H+ T+ + P+LVK++PDL+ D
Sbjct: 169 AGEYFVVNVSSPNTPGLRDLQHRDHLEHIFGTLQDAGAD-------PLLVKLSPDLTDDA 221
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYK 254
++ VV + +DG+I +NTT +R L + + E GGLSG+PL ++T ++ + +
Sbjct: 222 VEEALAVV--DEMDLDGVIATNTTTERPASLRSPNRVEEGGLSGKPLEARATRAVAFVAE 279
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
T +P+IGVGGV S A+ K++AGASLVQ+YT +Y GP L I L ELL+++G
Sbjct: 280 RTD--VPVIGVGGVSSAAGAYRKLRAGASLVQLYTGLIYQGPSLARDINRGLLELLERDG 337
Query: 315 YNSVSQAVGA 324
+ SV +AVGA
Sbjct: 338 FGSVDEAVGA 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
YFVVNVSSPNT LR LQ +D L+H+ T+ + P+LVK++PDL+ D+
Sbjct: 169 AGEYFVVNVSSPNTPGLRDLQHRDHLEHIFGTLQDAGAD-------PLLVKLSPDLT-DD 220
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+ A V+D + D+ N ++ A+LR
Sbjct: 221 AVEEALAVVDEM-------DLDGVIATNTTTERPASLR 251
>gi|50551069|ref|XP_503008.1| YALI0D18920p [Yarrowia lipolytica]
gi|49648876|emb|CAG81200.1| YALI0D18920p [Yarrowia lipolytica CLIB122]
Length = 452
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D +G+ +F +++ VVNVSSPNT LR LQ +++L LL VV RN++
Sbjct: 238 KNKTGDEVSDYTQGVTRFANLSDALVVNVSSPNTPGLRALQGEERLAKLLTAVVAERNKV 297
Query: 175 A-VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR--YKE 231
PILVKIAPDLS E IA SK +DG+IVSNTT+ R E+L ++
Sbjct: 298 QFANTYTPILVKIAPDLSESEIVSIAAAAKQSK--IDGIIVSNTTIQRPEHLRSQPYLSA 355
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
ETGGLSG PL+ + + I + K ++ I+G GG+ +GKDA E +AGA+ VQ+YT+
Sbjct: 356 ETGGLSGAPLKPIALKAIKTLRKNIGDEITIVGCGGISNGKDAIEFARAGATFVQVYTAL 415
Query: 292 VYHGPPLVTRIKSEL 306
Y GP L +K E+
Sbjct: 416 AYQGPGLPVHMKQEI 430
>gi|448491259|ref|ZP_21608234.1| dihydroorotate dehydrogenase 2 [Halorubrum californiensis DSM
19288]
gi|445693132|gb|ELZ45293.1| dihydroorotate dehydrogenase 2 [Halorubrum californiensis DSM
19288]
Length = 351
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V + ++ + + D D + + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPDVPVGV--NIGKSKSTPLDDAPDDYLYTYGRVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ LK +L T+ + P+LVK++PDL +D VV D +DG+
Sbjct: 189 ELQNREALKRILGTLADAGAD-------PLLVKLSPDLPEPAVEDALGVVDD--LGLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + K E GGLSG+P+ + +T+ + + + T +P+IGVGG+
Sbjct: 240 IATNTTTSRPDSLRSHNKAERGGLSGKPIESLATDRVRFVAERTD--VPVIGVGGISDAG 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASL+Q+YT VY GP L I L ELL+++G++SV+ AVGA
Sbjct: 298 GAYEKIRAGASLLQLYTGLVYEGPGLARDINEGLLELLEQDGFDSVADAVGA 349
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR+LQ ++ LK +L T+ + P+LV
Sbjct: 161 YLYTYGRVADAGDYFVVNVSSPNTPGLRELQNREALKRILGTLADAGAD-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++PDL +D VV D
Sbjct: 214 KLSPDLPEPAVEDALGVVDD 233
>gi|448356040|ref|ZP_21544788.1| dihydroorotate dehydrogenase 2 [Natrialba hulunbeirensis JCM 10989]
gi|445634137|gb|ELY87322.1| dihydroorotate dehydrogenase 2 [Natrialba hulunbeirensis JCM 10989]
Length = 356
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 117/189 (61%), Gaps = 8/189 (4%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A Y VVNVS PNT + + + L+ + +T+ + N L V PILVKI PD +
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLREIFETI-DAENDLGV----PILVKIGPDEPEESI 227
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
D+ D+V + VDG+I +NT+ R E L + +EE GGLSG+P+ ++ST +I +
Sbjct: 228 LDLVDIV--QEFDVDGIIATNTSTAR-EGLASAKREEWGGLSGKPVEDRSTAVIRTIASH 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T G LPIIGVGGV S A+ KI+AGASLVQ+YT FVY GP RI L LL+++G+
Sbjct: 285 TDGDLPIIGVGGVDSAASAYRKIRAGASLVQLYTGFVYQGPSTAKRINRGLVRLLERDGF 344
Query: 316 NSVSQAVGA 324
S+ AVGA
Sbjct: 345 TSIEAAVGA 353
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVS PNT + + + L+ + +T ++ N L + PILVKI PD +
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLREIFET-IDAENDLGV----PILVKIGPDEPEESI 227
Query: 116 KDIADVVLD-SVKGIL 130
D+ D+V + V GI+
Sbjct: 228 LDLVDIVQEFDVDGII 243
>gi|387791510|ref|YP_006256575.1| dihydroorotate dehydrogenase, subfamily 2 [Solitalea canadensis DSM
3403]
gi|379654343|gb|AFD07399.1| dihydroorotate dehydrogenase, subfamily 2 [Solitalea canadensis DSM
3403]
Length = 343
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 15/197 (7%)
Query: 117 DIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL---KTVVETRNQ 173
D+AD D V K DV YFVVNVSSPNT LR LQ K+ LK LL +T+ ET+ +
Sbjct: 154 DVADE--DFVICFEKLFDVVDYFVVNVSSPNTPGLRDLQDKEPLKKLLFRLQTLNETKPK 211
Query: 174 LAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK--E 231
PIL+KIAPDL+ ++ DI ++VL++K + G+I +NTT+ R E L +
Sbjct: 212 SK-----PILLKIAPDLTNEQLDDIIEIVLETK--IAGVIATNTTISR-EGLKSNPDLVN 263
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
+ GGLSG+P++++STE+I + + + PIIGVGG+ SG DA EK+ AGASLVQIYT F
Sbjct: 264 QMGGLSGKPVKDRSTEVIRYLSQKSNKAFPIIGVGGIHSGDDAIEKLNAGASLVQIYTGF 323
Query: 292 VYHGPPLVTRIKSELEE 308
+Y GP LV I ++ E
Sbjct: 324 IYKGPGLVKEINKKILE 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL---LKTVVETRNQLALKPLPPILVKIA 107
K DV YFVVNVSSPNT LR LQ K+ LK L L+T+ ET+ + PIL+KIA
Sbjct: 166 KLFDVVDYFVVNVSSPNTPGLRDLQDKEPLKKLLFRLQTLNETKPKSK-----PILLKIA 220
Query: 108 PDLSLDEKKDIADVVLDS 125
PDL+ ++ DI ++VL++
Sbjct: 221 PDLTNEQLDDIIEIVLET 238
>gi|326800925|ref|YP_004318744.1| dihydroorotate dehydrogenase [Sphingobacterium sp. 21]
gi|326551689|gb|ADZ80074.1| Dihydroorotate dehydrogenase [Sphingobacterium sp. 21]
Length = 345
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 116/175 (66%), Gaps = 7/175 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
DV YFVVNVSSPNT LR LQ K L H+L T+ + RN L PIL+KIAPDL+
Sbjct: 170 DVVDYFVVNVSSPNTPGLRDLQEKAPLMHILNTL-QQRN-LKNGISRPILLKIAPDLTNS 227
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA--RYKEETGGLSGEPLRNKSTELISE 251
+ DI ++V + + G+I +NTT+DR E L + ETGGLSG+PL +STE+I
Sbjct: 228 QLDDIIEIV--TTTGIAGVIATNTTIDR-EGLRSPINLTRETGGLSGKPLTKRSTEVIRY 284
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + + PIIGVGG+ S +DA EK++AGASLVQ+YT F+Y GP L+ RI +L
Sbjct: 285 LSEKSNKAFPIIGVGGIHSAEDALEKLEAGASLVQLYTGFIYEGPGLIKRICKKL 339
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
DV YFVVNVSSPNT LR LQ K L H+L T ++ RN L PIL+KIAPDL+
Sbjct: 170 DVVDYFVVNVSSPNTPGLRDLQEKAPLMHILNT-LQQRN-LKNGISRPILLKIAPDLTNS 227
Query: 114 EKKDIADVV 122
+ DI ++V
Sbjct: 228 QLDDIIEIV 236
>gi|456063362|ref|YP_007502332.1| Dihydroorotate oxidase [beta proteobacterium CB]
gi|455440659|gb|AGG33597.1| Dihydroorotate oxidase [beta proteobacterium CB]
Length = 343
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA-- 175
I + D V + +VA Y VN+SSPNT NLR LQ +D L+ LL + R L+
Sbjct: 153 IENAASDYVTAMQAVYEVAAYITVNISSPNTQNLRALQGEDMLRSLLGALHLAREALSDL 212
Query: 176 --VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET 233
V+ P+ +KIAPDL + K IAD++L+ K+D +I +NTT+ R + + EE
Sbjct: 213 HGVRK--PLFLKIAPDLDHSDIKLIADLLLE--FKIDAIIATNTTIARDAVRELEFGEEM 268
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GGLSG P+R STE++ + + +PIIGVGG+ SGKDA EKI AGASLVQ+Y+ +Y
Sbjct: 269 GGLSGAPVRTASTEVVKSLKQYLGDAIPIIGVGGILSGKDAQEKIAAGASLVQLYSGLIY 328
Query: 294 HGPPLVTRIKSELEELLQK 312
GP L+ SE +L+K
Sbjct: 329 RGPKLI----SECAAILKK 343
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA-LKPL-PPILVKIAPDLS 111
+VA Y VN+SSPNT NLR LQ +D L+ LL + R L+ L + P+ +KIAPDL
Sbjct: 169 EVAAYITVNISSPNTQNLRALQGEDMLRSLLGALHLAREALSDLHGVRKPLFLKIAPDLD 228
Query: 112 LDEKKDIADVVLD 124
+ K IAD++L+
Sbjct: 229 HSDIKLIADLLLE 241
>gi|429121339|ref|ZP_19181975.1| Dihydroorotate dehydrogenase [Cronobacter sakazakii 680]
gi|426324183|emb|CCK12712.1| Dihydroorotate dehydrogenase [Cronobacter sakazakii 680]
Length = 336
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + +L+ K P+ VKIAPDLSL+
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPVAVKIAPDLSLE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ K+TE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKNTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + +L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQRLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSLEELIQVADSLVRHNIDGVI 243
>gi|340028191|ref|ZP_08664254.1| dihydroorotate dehydrogenase 2 [Paracoccus sp. TRP]
Length = 352
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 124/203 (61%), Gaps = 12/203 (5%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
S+D D A+VV S G A + VNVSSPNT LR LQ + L LL+ V++
Sbjct: 146 SIDRSADFAEVVRIS-------GAHADFLTVNVSSPNTEKLRDLQGAEALAALLQGVLQA 198
Query: 171 RNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
R+ L K PP+ +KIAPD LD + VD +I +NTT+ R + L + +
Sbjct: 199 RDSL--KNCPPVFIKIAPD--LDNAAIADIAAVALAAPVDAIIATNTTLTR-DGLSSPHA 253
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
+ GGLSG PL +ST +++ +Y+ T+G++P+IGVGG+ S + A++K++AGAS VQIY++
Sbjct: 254 PQAGGLSGAPLFERSTRVLARLYRETQGRVPLIGVGGIGSTEQAWQKLRAGASAVQIYSA 313
Query: 291 FVYHGPPLVTRIKSELEELLQKE 313
+Y G L +RI EL++ L +E
Sbjct: 314 LIYQGFSLASRIARELDQRLARE 336
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
G A + VNVSSPNT LR LQ + L LL+ V++ R+ +LK PP+ +KIAPDL
Sbjct: 161 GAHADFLTVNVSSPNTEKLRDLQGAEALAALLQGVLQARD--SLKNCPPVFIKIAPDL 216
>gi|441153532|ref|ZP_20966326.1| dihydroorotate dehydrogenase 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440618423|gb|ELQ81495.1| dihydroorotate dehydrogenase 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 369
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 5/211 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ + D V + A Y VVNVSSPNT LR LQA D L+ LL V E ++
Sbjct: 157 EAIADYVASTERLAGHADYLVVNVSSPNTPGLRNLQAVDHLRPLLSAVREAADRTVTGRR 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY---LDARYKEETGGL 236
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R D +ETGGL
Sbjct: 217 VPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIARDSLGLVSDPALVQETGGL 274
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG P++ +S E++ +Y ++ +IGVGG+ + +DA+++I AGA+LVQ Y++F+Y GP
Sbjct: 275 SGAPVKERSLEVLRRLYARVGDRVTLIGVGGIATAEDAWQRILAGATLVQGYSAFIYEGP 334
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
I L L+ Y +++ AVGA HK
Sbjct: 335 FYARAIHKGLAARLRNSPYATLADAVGAEHK 365
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA D L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQAVDHLRPLLSAVREAADRTVTGRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|156934568|ref|YP_001438484.1| dihydroorotate dehydrogenase 2 [Cronobacter sakazakii ATCC BAA-894]
gi|166199351|sp|A7MEW0.1|PYRD_ENTS8 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|156532822|gb|ABU77648.1| hypothetical protein ESA_02402 [Cronobacter sakazakii ATCC BAA-894]
Length = 336
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + L+ K P+ VKIAPDLSL+
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQVLSQKHHKYVPVAVKIAPDLSLE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQVLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSLEELIQVADSLVRHNIDGVI 243
>gi|386826779|ref|ZP_10113886.1| dihydroorotate dehydrogenase, subfamily 2 [Beggiatoa alba B18LD]
gi|386427663|gb|EIJ41491.1| dihydroorotate dehydrogenase, subfamily 2 [Beggiatoa alba B18LD]
Length = 337
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA-- 175
I + V D + + K A Y VN+SSPNTANLR+LQ D+L LL + + + +LA
Sbjct: 149 IENAVDDYLYCLHKVYAHASYITVNISSPNTANLRQLQHGDELDRLLNALKQAQCELANS 208
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P++VKIAPDL+ +E + IA+ +L K ++DG+I +NTT+DR ++ ETGG
Sbjct: 209 QHKYVPLVVKIAPDLNTEELQAIAEKLL--KHQIDGVIATNTTLDRQAVTGLKHAIETGG 266
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG+PL ++T +++E+++L + K+PII GG+ S +DA K++AGA LVQ+YT +Y G
Sbjct: 267 LSGQPLTQRATAVVAELHRLLQDKIPIIAAGGIMSAEDAQAKLQAGAQLVQLYTGLIYEG 326
Query: 296 PPLVTRIKS 304
LV + S
Sbjct: 327 AGLVQEVIS 335
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 2 VGLDESTCSRILSRVFRS----------GEWGCTPTHNMLSSFARMRAWVLQFWLLGILK 51
+G + + +L+ V R+ G+ TP N + +L + K
Sbjct: 114 LGFNNAGVDALLTHVARAQYRGILGINIGKNATTPIENAVDD-----------YLYCLHK 162
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPD 109
A Y VN+SSPNTANLR+LQ D+L LL + + + +LA P++VKIAPD
Sbjct: 163 VYAHASYITVNISSPNTANLRQLQHGDELDRLLNALKQAQCELANSQHKYVPLVVKIAPD 222
Query: 110 LSLDEKKDIADVVL 123
L+ +E + IA+ +L
Sbjct: 223 LNTEELQAIAEKLL 236
>gi|389749047|gb|EIM90224.1| hypothetical protein STEHIDRAFT_108772 [Stereum hirsutum FP-91666
SS1]
Length = 505
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLR--------KLQAKDQLKHLLKTVVETRNQLA 175
D V G+ F A VVNVSSPNT LR +Q K+ L++LL +V + R++++
Sbjct: 228 DFVTGVKAFAPYADALVVNVSSPNTPGLRLPETVATRGMQQKEVLENLLSSVTKARDEVS 287
Query: 176 V----KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE 231
P +L+KIAPDL+ + +DIAD V+++ +DG+IVSNTT+ R L + K
Sbjct: 288 TTLTKAQKPKLLLKIAPDLTAQQIQDIADAVINAGG-IDGVIVSNTTIARPASLRSSNKS 346
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
E GGLSG PL S + + L +PIIG GG+ SG DA +AGAS VQ+YTSF
Sbjct: 347 EMGGLSGAPLLPLSLSAVRSLRPLLPASIPIIGCGGISSGSDALAFARAGASFVQVYTSF 406
Query: 292 VYHGPPLVTRIKSELEELLQKE 313
Y G RIK EL+E+L+KE
Sbjct: 407 GYDGAGACRRIKDELDEVLRKE 428
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLR--------KLQAKDQLKHLLKTVVETRNQ--- 93
++ G+ F A VVNVSSPNT LR +Q K+ L++LL +V + R++
Sbjct: 229 FVTGVKAFAPYADALVVNVSSPNTPGLRLPETVATRGMQQKEVLENLLSSVTKARDEVST 288
Query: 94 -LALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
L P +L+KIAPDL+ + +DIAD V+++ G + V N + A+LR
Sbjct: 289 TLTKAQKPKLLLKIAPDLTAQQIQDIADAVINA-------GGIDGVIVSNTTIARPASLR 341
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAP 188
K ++ L + + AV+ L P+L P
Sbjct: 342 S-SNKSEMGGLSGAPLLPLSLSAVRSLRPLLPASIP 376
>gi|386321031|ref|YP_006017193.1| Dihydroorotate dehydrogenase [Riemerella anatipestifer RA-GD]
gi|416109575|ref|ZP_11591534.1| dihydroorotate dehydrogenase 2 [Riemerella anatipestifer RA-YM]
gi|442313741|ref|YP_007355044.1| Dihydroorotate dehydrogenase [Riemerella anatipestifer RA-CH-2]
gi|315024068|gb|EFT37070.1| dihydroorotate dehydrogenase 2 [Riemerella anatipestifer RA-YM]
gi|325335574|gb|ADZ11848.1| Dihydroorotate dehydrogenase [Riemerella anatipestifer RA-GD]
gi|441482664|gb|AGC39350.1| Dihydroorotate dehydrogenase [Riemerella anatipestifer RA-CH-2]
Length = 340
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 115/173 (66%), Gaps = 5/173 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT NLR LQ K+ L LLK + NQ +K PIL+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRDLQEKEPLTKLLKLLQ-LENQKKIKQ-KPILLKIAPDLTDS 226
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ D+ D+V G+I +NTT+ R E L + K E GGLSG+PLR ++TE+I +
Sbjct: 227 QLLDVIDIV--KTTNTAGVIATNTTISR-ENLKSNLKSEVGGLSGKPLRERATEVIKFLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + G PIIGVGG+ S +DA EKIKAGA+LVQ+YT F+Y GP LV RI ++
Sbjct: 284 EKSGGAFPIIGVGGIHSEEDALEKIKAGATLVQLYTGFIYEGPALVKRINKKI 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT NLR LQ K+ L LLK + NQ +K PIL+KIAPDL+
Sbjct: 169 DYVDYFVVNVSSPNTPNLRDLQEKEPLTKLLKLLQ-LENQKKIKQ-KPILLKIAPDLTDS 226
Query: 114 EKKDIADVV 122
+ D+ D+V
Sbjct: 227 QLLDVIDIV 235
>gi|225011818|ref|ZP_03702256.1| Dihydroorotate oxidase [Flavobacteria bacterium MS024-2A]
gi|225004321|gb|EEG42293.1| Dihydroorotate oxidase [Flavobacteria bacterium MS024-2A]
Length = 340
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 121/170 (71%), Gaps = 7/170 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
YFVVNVSSPNT NLR LQ K+ L HLL+T+ +T N KP P PIL+KIAPDL+ ++
Sbjct: 172 YFVVNVSSPNTPNLRVLQDKEPLTHLLQTL-KTLN--LKKPDPKPILLKIAPDLTDEQLM 228
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DI D++ + ++G+I +NTT+ R E L ++ K E GGLSG+P+ ++STE+I + + +
Sbjct: 229 DIIDII--TSVNIEGVIATNTTLSR-EGLLSQQKTEMGGLSGKPVADRSTEVIRFLSEKS 285
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
PIIGVGG+ S +DA +K++AGASLVQ+YT F+Y GP ++ +I +
Sbjct: 286 NKAFPIIGVGGIHSPQDAIDKLEAGASLVQLYTGFIYEGPAVIKKINKAI 335
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
YFVVNVSSPNT NLR LQ K+ L HLL+T ++T N KP P PIL+KIAPDL+ ++
Sbjct: 172 YFVVNVSSPNTPNLRVLQDKEPLTHLLQT-LKTLN--LKKPDPKPILLKIAPDLTDEQLM 228
Query: 117 DIADVVLD-SVKGIL 130
DI D++ +++G++
Sbjct: 229 DIIDIITSVNIEGVI 243
>gi|389810090|ref|ZP_10205672.1| dihydroorotate dehydrogenase 2 [Rhodanobacter thiooxydans LCS2]
gi|388441078|gb|EIL97383.1| dihydroorotate dehydrogenase 2 [Rhodanobacter thiooxydans LCS2]
Length = 345
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 117/187 (62%), Gaps = 6/187 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLS 191
++A Y VN+SSPNT LR LQ + L+ + + E + +L + P+L+KIAPDLS
Sbjct: 163 ELASYVTVNISSPNTQGLRDLQQEATLRRFISVLREAQERLGSQHGRRKPMLLKIAPDLS 222
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
E IA+V+L + +DG+I +NTT+D D ETGGLSG+PL +ST ++S
Sbjct: 223 EAELDSIAEVLL--RTGIDGVICTNTTIDHTAVADDPRGSETGGLSGKPLFERSTAVLSG 280
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
M+ +G++P+IGVGG+ G DA EK++ GASLVQ+Y+ +Y GPPLV E+ Q
Sbjct: 281 MHARLQGRIPLIGVGGILDGSDAAEKMELGASLVQLYSGLIYRGPPLVAECVDEIRR--Q 338
Query: 312 KEGYNSV 318
+E ++
Sbjct: 339 RENADAA 345
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+LL + + ++A Y VN+SSPNT LR LQ + L+ + + E + +L + P+
Sbjct: 154 YLLCLTRVYELASYVTVNISSPNTQGLRDLQQEATLRRFISVLREAQERLGSQHGRRKPM 213
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
L+KIAPDLS E IA+V+L + + G++
Sbjct: 214 LLKIAPDLSEAELDSIAEVLLRTGIDGVI 242
>gi|431805495|ref|YP_007232396.1| dihydroorotate dehydrogenase [Liberibacter crescens BT-1]
gi|430799470|gb|AGA64141.1| Dihydroorotate dehydrogenase [Liberibacter crescens BT-1]
Length = 362
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 6/206 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ K+ D + D GI +F VA YF +N+SSPNT +LRKLQ ++ L LL ++++
Sbjct: 138 INIGANKNSTDRIADYTLGIHRFYSVATYFTINISSPNTTDLRKLQERENLSKLLSSILK 197
Query: 170 TRNQLAVKPLP--PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K PI +KI+PDL+ E DIA + +DG I+SNTT+ Y+ L
Sbjct: 198 ARHEEIEKTGKNIPIFLKISPDLTERELDDIAAEAI--AYSIDGFIISNTTLS-YDDLKN 254
Query: 228 RYKEET-GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ +T GGLSG PL KST ++++M K + IIGVGG+ S +DA EKIKAGA L+Q
Sbjct: 255 KVSSDTSGGLSGSPLFQKSTTVLAKMRKRVGPDMVIIGVGGISSAEDAIEKIKAGADLLQ 314
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQK 312
+Y++ +Y GP L RI L L+K
Sbjct: 315 LYSAMIYEGPTLPQRILKALSLFLEK 340
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
+ LGI +F VA YF +N+SSPNT +LRKLQ ++ L LL ++++ R++ K PI
Sbjct: 153 YTLGIHRFYSVATYFTINISSPNTTDLRKLQERENLSKLLSSILKARHEEIEKTGKNIPI 212
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
+KI+PDL+ E DI A+ + S+ G +
Sbjct: 213 FLKISPDLTERELDDIAAEAIAYSIDGFI 241
>gi|300772980|ref|ZP_07082849.1| dihydroorotate oxidase [Sphingobacterium spiritivorum ATCC 33861]
gi|300759151|gb|EFK55978.1| dihydroorotate oxidase [Sphingobacterium spiritivorum ATCC 33861]
Length = 344
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 5/184 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D VLD + D YFVVNVSSPNT LR LQ K+ L ++L+ +++ N+ V
Sbjct: 156 DAVLDYIYCFKALFDYVDYFVVNVSSPNTPGLRDLQEKEPLMNILRQLMDINNKDGVSK- 214
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETGGLSG 238
PIL+KIAPDL+ + DI ++V + K+ G+I +NTTV R D +ETGG+SG
Sbjct: 215 -PILLKIAPDLTDSQLDDIVEIV--QETKIAGVIATNTTVSRDGLQSDPNLVKETGGVSG 271
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
+PL N+ST +I + + PIIGVGG+ S +DA EK+ AGASL+Q+YT F+Y GP L
Sbjct: 272 KPLTNRSTVVIRYLADKSSRSFPIIGVGGIHSAQDAIEKLDAGASLIQVYTGFIYEGPGL 331
Query: 299 VTRI 302
++ I
Sbjct: 332 ISDI 335
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ K+ L ++L+ +++ N+ + PIL+KIAPDL+
Sbjct: 170 DYVDYFVVNVSSPNTPGLRDLQEKEPLMNILRQLMDINNKDGVS--KPILLKIAPDLTDS 227
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI ++V ++ + G++
Sbjct: 228 QLDDIVEIVQETKIAGVI 245
>gi|117619397|ref|YP_856810.1| dihydroorotate dehydrogenase 2 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166234198|sp|A0KKK9.1|PYRD_AERHH RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|117560804|gb|ABK37752.1| dihydroorotate oxidase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 336
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
D +++ KD + +D V D A Y VN+SSPNT LR LQ D L LL +
Sbjct: 145 DTPIEQGKDDYLICMDKVY------DQAGYIAVNISSPNTPGLRSLQYGDALDELLAALK 198
Query: 169 ETRNQLAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ +LA K P+ VKIAPDL+ DE +A ++ K +DG+I +NTT++R D
Sbjct: 199 VRQQELAAQYKKYVPLAVKIAPDLTPDEINQVAASLI--KNGIDGVIATNTTLERDMIYD 256
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ E GGLSG PL++KSTE+I ++ K G LPIIGVGG+ S A EK+ AGASLVQ
Sbjct: 257 MPHAAEAGGLSGRPLQHKSTEVIRQLAKALDGALPIIGVGGIDSAMAAREKLAAGASLVQ 316
Query: 287 IYTSFVYHGPPLVTRIKSEL 306
IY+ F+Y GP LV I + +
Sbjct: 317 IYSGFIYKGPDLVKEIVTHI 336
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ D L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDQAGYIAVNISSPNTPGLRSLQYGDALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDL+ DE + A ++ + + G++
Sbjct: 215 AVKIAPDLTPDEINQVAASLIKNGIDGVI 243
>gi|340618824|ref|YP_004737277.1| dihydroorotate dehydrogenase [Zobellia galactanivorans]
gi|339733621|emb|CAZ96998.1| Dihydroorotate dehydrogenase [Zobellia galactanivorans]
Length = 347
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 115/174 (66%), Gaps = 8/174 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP---PILVKIAPDL 190
D YFVVNVSSPNT LR+LQ K L LL + +LA + PIL+KIAPDL
Sbjct: 167 DHVDYFVVNVSSPNTPGLRELQDKAPLTALLLELKSENTKLARQKQAKERPILLKIAPDL 226
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--DARYKEETGGLSGEPLRNKSTEL 248
+ D+ DI +V D+K +DG+I +NTT+ R E+L DA ETGGLSG+PL +STE+
Sbjct: 227 TDDQLLDIIAIVGDTK--IDGVIATNTTIGR-EHLKSDASLVSETGGLSGKPLTKRSTEV 283
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
I + + + PIIGVGG+ S +DA EK++AGA LVQ+YT F+Y GP L+ RI
Sbjct: 284 IRFLAERSNKAFPIIGVGGIHSEEDALEKLEAGADLVQLYTGFIYEGPALIKRI 337
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Query: 20 GEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 79
G+ TP N +S +L+ D YFVVNVSSPNT LR+LQ K
Sbjct: 144 GKNKLTPNENAVSD-----------YLICFDALFDHVDYFVVNVSSPNTPGLRELQDKAP 192
Query: 80 LKHLLKTVVETRNQLALKPLP---PILVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
L LL + +LA + PIL+KIAPDL+ D+ DI +V D+ + G++
Sbjct: 193 LTALLLELKSENTKLARQKQAKERPILLKIAPDLTDDQLLDIIAIVGDTKIDGVI 247
>gi|406605194|emb|CCH43353.1| Dihydroorotate dehydrogenase, mitochondrial [Wickerhamomyces
ciferrii]
Length = 435
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 127/218 (58%), Gaps = 8/218 (3%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D V D + G+ F A V+NVSSPNT LR LQ + +L +LLK VV R+ L
Sbjct: 221 KNKTGDEVQDYLTGVENFNQFADVLVINVSSPNTPGLRNLQGEAKLTNLLKEVVNKRDSL 280
Query: 175 --AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR--YK 230
K PILVK+APDL E K I V + K++G+IVSNTT+ R L +R
Sbjct: 281 IDEHKKKTPILVKVAPDLDESEIKSI--VYSAKESKINGIIVSNTTIQRPGDLKSRSDLT 338
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTK-GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+ GGLSG+PL+ S + + K TK L ++G GG+ SGKD E KAGA V++YT
Sbjct: 339 SQVGGLSGKPLKPLSLKALRTAAKYTKDSDLILVGCGGISSGKDVLEFGKAGAKYVELYT 398
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
SF Y GP LV +IK EL E LQKEG + Q VG+ K
Sbjct: 399 SFAYKGPGLVYKIKKELTEELQKEG-KTWEQIVGSDLK 435
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPL 99
+Q +L G+ F A V+NVSSPNT LR LQ + +L +LLK VV R+ L K
Sbjct: 228 VQDYLTGVENFNQFADVLVINVSSPNTPGLRNLQGEAKLTNLLKEVVNKRDSLIDEHKKK 287
Query: 100 PPILVKIAPDLSLDEKKDI 118
PILVK+APDL E K I
Sbjct: 288 TPILVKVAPDLDESEIKSI 306
>gi|372221540|ref|ZP_09499961.1| dihydroorotate dehydrogenase 2 [Mesoflavibacter zeaxanthinifaciens
S86]
Length = 346
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV---KPLPPILVKIAPDL 190
D YFVVNVSSPNT LR+LQ K L +L + +LA PIL+KIAPDL
Sbjct: 167 DHVDYFVVNVSSPNTPGLRELQDKKPLTEILVALKRQNEKLATLKKSKTKPILLKIAPDL 226
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK--EETGGLSGEPLRNKSTEL 248
+ + DI D+V D++ +DG+I +NTT+ R + L + EE GGLSG+PL N+STE+
Sbjct: 227 TNAQLFDIIDIVKDTQ--IDGVIATNTTIAR-DNLKSHLTLVEEKGGLSGKPLTNRSTEV 283
Query: 249 ISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
I ++ + G PIIGVGG+ S +DA K++AGASLVQ+YT F+Y GP L+ RI
Sbjct: 284 IEFLHYHSNGSFPIIGVGGIHSEEDALAKLRAGASLVQLYTGFIYEGPALIKRI 337
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 24/130 (18%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL---KPLPPILVKIAPDL 110
D YFVVNVSSPNT LR+LQ K L +L + +LA PIL+KIAPDL
Sbjct: 167 DHVDYFVVNVSSPNTPGLRELQDKKPLTEILVALKRQNEKLATLKKSKTKPILLKIAPDL 226
Query: 111 SLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+ + DI D+V D+ + G++ + NT A+D LK L T+VE
Sbjct: 227 TNAQLFDIIDIVKDTQIDGVI--------------ATNTT-----IARDNLKSHL-TLVE 266
Query: 170 TRNQLAVKPL 179
+ L+ KPL
Sbjct: 267 EKGGLSGKPL 276
>gi|145588926|ref|YP_001155523.1| dihydroorotate oxidase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189038442|sp|A4SWU5.1|PYRD_POLSQ RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|145047332|gb|ABP33959.1| dihydroorotate oxidase A [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 344
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
I D D + + ++A Y VN+SSPNT NLR LQ +D L+ LL+++ + R +L+ +
Sbjct: 153 IEDAASDYIAAMEAVYEIATYITVNISSPNTQNLRALQGEDMLRSLLRSLDDARKRLSDR 212
Query: 178 --PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P+ +KIAPDL ++ IAD++++ +D +I +NTT+ R +Y EETGG
Sbjct: 213 YGVRKPLFLKIAPDLDQNDIHLIADLLME--FNIDAVIATNTTISREAVTGMQYGEETGG 270
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG P+R S +I + +LPIIGVGG+ SG DA EKI AGASLVQ+Y+ +Y G
Sbjct: 271 LSGAPVRIASNIVIRALKARLGVQLPIIGVGGILSGADAREKIMAGASLVQLYSGLIYKG 330
Query: 296 PPLVTRIKSELEE 308
P LV+ L +
Sbjct: 331 PDLVSECAKALRQ 343
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Query: 6 ESTCSRILSRVF--RSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNV 63
E+ SR+ +F R G G N ++ + ++ + ++A Y VN+
Sbjct: 123 EACVSRVRQSIFWQRGGVLGLNIGKNAITPIEDAAS----DYIAAMEAVYEIATYITVNI 178
Query: 64 SSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLDEKKDIADV 121
SSPNT NLR LQ +D L+ LL+++ + R +L+ + P+ +KIAPDL ++ IAD+
Sbjct: 179 SSPNTQNLRALQGEDMLRSLLRSLDDARKRLSDRYGVRKPLFLKIAPDLDQNDIHLIADL 238
Query: 122 VLD 124
+++
Sbjct: 239 LME 241
>gi|374586396|ref|ZP_09659488.1| dihydroorotate oxidase A [Leptonema illini DSM 21528]
gi|373875257|gb|EHQ07251.1| dihydroorotate oxidase A [Leptonema illini DSM 21528]
Length = 354
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 117/182 (64%), Gaps = 13/182 (7%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHL---LKTVVETRNQLAVKPLPPILVKIAPDLSL 192
A Y VNVSSPNT LR LQ ++ L L++ ++ ++ P+ VK+APDLS
Sbjct: 171 ADYIAVNVSSPNTPGLRLLQEASKIHSLVAALRSFIDENRRV------PLFVKLAPDLSE 224
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
+E K + ++ + DGLI++NT++D+ A + GGLSG P+R +ST++I
Sbjct: 225 EELKASIEAIV--AARADGLILTNTSLDKSSVPAA--VDVQGGLSGAPVRQRSTQIIRRA 280
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
++LT+G+ PIIGVGG+FSG+DA EKIKAGASLVQ+YT ++Y GP L +I ++ L K
Sbjct: 281 FQLTEGRTPIIGVGGIFSGEDALEKIKAGASLVQVYTGYIYRGPGLPAQICRSIDTFLDK 340
Query: 313 EG 314
G
Sbjct: 341 SG 342
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHL---LKTVVETRNQLALKPLPPILVKIAPDLSL 112
A Y VNVSSPNT LR LQ ++ L L++ ++ ++ P+ VK+APDLS
Sbjct: 171 ADYIAVNVSSPNTPGLRLLQEASKIHSLVAALRSFIDENRRV------PLFVKLAPDLSE 224
Query: 113 DE-KKDIADVVLDSVKGIL 130
+E K I +V G++
Sbjct: 225 EELKASIEAIVAARADGLI 243
>gi|392548620|ref|ZP_10295757.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas rubra ATCC
29570]
Length = 336
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D + + K + A Y VN+SSPNT LR LQ + L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGEALDDLLQSLKNEQIDLIEKHKKSVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPD+ + + IA+ +++++ +DG+I +NTT+ R + EE GGLSG P+
Sbjct: 214 MLVKIAPDVDAVQLQQIAESLVNNR--IDGVIATNTTLSREAVKGLEHAEEAGGLSGRPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R KST+++SE+ ++T+GKLPIIGVGG+ S A EK+ AGA LVQ+YT F+Y GP L+ +
Sbjct: 272 REKSTQVVSELKRMTEGKLPIIGVGGIDSAAAAKEKLNAGADLVQVYTGFIYEGPQLIKK 331
Query: 302 IKSEL 306
I +E+
Sbjct: 332 ILTEI 336
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ + L LL+++ + L K P+LVKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGEALDDLLQSLKNEQIDLIEKHKKSVPMLVKIAPDVDAV 225
Query: 114 EKKDIAD-VVLDSVKGIL 130
+ + IA+ +V + + G++
Sbjct: 226 QLQQIAESLVNNRIDGVI 243
>gi|56387317|gb|AAV86071.1| dihydroorotate dehydrogenase, partial [synthetic construct]
Length = 412
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 48/261 (18%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+S+ + KD ++V D I K G A Y +NVSSPNT LR Q +LK+++ +V E
Sbjct: 153 VSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 212
Query: 170 TRNQL--------------------------------------------AVKPLPPILVK 185
+ L K P + VK
Sbjct: 213 EIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVK 272
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKS 245
+APDL+ ++KK+IADV+L++ +DG+I+SNTT + ++ + GG+SG L++ S
Sbjct: 273 LAPDLNQEQKKEIADVLLETN--IDGMIISNTTTQINDI--KSFENKKGGVSGAKLKDIS 328
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
T+ I EMY T ++PII GG+FSG DA EKI+AGAS+ Q+Y+ V++G +IK E
Sbjct: 329 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRE 388
Query: 306 LEELLQKEGYNSVSQAVGAAH 326
L LL + GY ++ +A+G H
Sbjct: 389 LNHLLYQRGYYNLKEAIGRKH 409
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 44/121 (36%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------- 94
I K G A Y +NVSSPNT LR Q +LK+++ +V E + L
Sbjct: 172 INKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNE 231
Query: 95 ------------------------------ALKPLPPILVKIAPDLSLDEKKDIADVVLD 124
K P + VK+APDL+ ++KK+IADV+L+
Sbjct: 232 DNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLE 291
Query: 125 S 125
+
Sbjct: 292 T 292
>gi|357032730|ref|ZP_09094665.1| dihydroorotate dehydrogenase 2 [Gluconobacter morbifer G707]
gi|356413721|gb|EHH67373.1| dihydroorotate dehydrogenase 2 [Gluconobacter morbifer G707]
Length = 357
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 127/209 (60%), Gaps = 7/209 (3%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K AD + D + + + A Y +N+SSPNT LR LQ+ D L+ LL + TRN
Sbjct: 151 NKTGADPLKDYPELVSRVSSYADYVTMNLSSPNTPGLRDLQSADILRELL-AAINTRNPQ 209
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETG 234
PP+LVK+APDL I + + + GLI++NTT+ R +L + + ETG
Sbjct: 210 R----PPLLVKLAPDLDNASYGPILEAAIAGGAQ--GLILTNTTITRPGHLTSPHANETG 263
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL ++ +++ + + +G+L +I GG+ SG+D E+I+ GA +VQIYTSFV
Sbjct: 264 GLSGRPLAPRARDVLKAVSEQNRGRLALISCGGIESGEDILERIRMGADMVQIYTSFVLQ 323
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GP ++ R+K+EL + ++++G+ ++S A G
Sbjct: 324 GPGILARLKAELRDAMRRDGFETISDARG 352
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
A Y +N+SSPNT LR LQ+ D L+ LL + TRN PP+LVK+APDL
Sbjct: 172 ADYVTMNLSSPNTPGLRDLQSADILRELL-AAINTRNPQR----PPLLVKLAPDL 221
>gi|75765261|pdb|1TV5|A Chain A, Plasmodium Falciparum Dihydroorotate Dehydrogenase With A
Bound Inhibitor
Length = 443
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 48/261 (18%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+S+ + KD ++V D I K G A Y +NVSSPNT LR Q +LK+++ +V E
Sbjct: 184 VSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 243
Query: 170 TRNQL--------------------------------------------AVKPLPPILVK 185
+ L K P + VK
Sbjct: 244 EIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVK 303
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKS 245
+APDL+ ++KK+IADV+L++ +DG+I+SNTT + ++ + GG+SG L++ S
Sbjct: 304 LAPDLNQEQKKEIADVLLETN--IDGMIISNTTTQINDI--KSFENKKGGVSGAKLKDIS 359
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
T+ I EMY T ++PII GG+FSG DA EKI+AGAS+ Q+Y+ V++G +IK E
Sbjct: 360 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRE 419
Query: 306 LEELLQKEGYNSVSQAVGAAH 326
L LL + GY ++ +A+G H
Sbjct: 420 LNHLLYQRGYYNLKEAIGRKH 440
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 44/121 (36%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------- 94
I K G A Y +NVSSPNT LR Q +LK+++ +V E + L
Sbjct: 203 INKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNE 262
Query: 95 ------------------------------ALKPLPPILVKIAPDLSLDEKKDIADVVLD 124
K P + VK+APDL+ ++KK+IADV+L+
Sbjct: 263 DNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLE 322
Query: 125 S 125
+
Sbjct: 323 T 323
>gi|324544606|gb|ADY49682.1| Dihydroorotate dehydrogenase, partial [Ascaris suum]
Length = 126
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 98/125 (78%)
Query: 203 LDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPI 262
+D + +DG+IVSNTT+ R L +++ E GGLSG+PL+ ST+ + +MY+LT GK+PI
Sbjct: 1 MDKRYGIDGMIVSNTTISRPVDLRSKHSHEDGGLSGKPLKELSTQCVRDMYRLTSGKVPI 60
Query: 263 IGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAV 322
IG GG+ SG DA+ KI+AGASLVQ+YT+ VY G P++ ++K EL ELL+++GY++VS+AV
Sbjct: 61 IGCGGISSGADAYAKIRAGASLVQLYTALVYQGFPVIGKVKRELAELLRRDGYSNVSEAV 120
Query: 323 GAAHK 327
GA HK
Sbjct: 121 GADHK 125
>gi|86170474|ref|XP_966023.1| dihydroorotate dehydrogenase, mitochondrial precursor [Plasmodium
falciparum 3D7]
gi|730436|sp|Q08210.1|PYRD_PLAF7 RecName: Full=Dihydroorotate dehydrogenase (quinone),
mitochondrial; Short=DHOdehase; AltName:
Full=Dihydroorotate oxidase; Flags: Precursor
gi|397703|gb|AAC37170.1| dihydroorotate dehydrogenase [Plasmodium falciparum]
gi|18700317|dbj|BAB85127.1| dihydroorotate dehydrogenase [Plasmodium falciparum]
gi|46362265|emb|CAG25203.1| dihydroorotate dehydrogenase, mitochondrial precursor [Plasmodium
falciparum 3D7]
Length = 569
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 48/261 (18%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+S+ + KD ++V D I K G A Y +NVSSPNT LR Q +LK+++ +V E
Sbjct: 310 VSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 369
Query: 170 TRNQL--------------------------------------------AVKPLPPILVK 185
+ L K P + VK
Sbjct: 370 EIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVK 429
Query: 186 IAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKS 245
+APDL+ ++KK+IADV+L++ +DG+I+SNTT + ++ + GG+SG L++ S
Sbjct: 430 LAPDLNQEQKKEIADVLLETN--IDGMIISNTTTQINDI--KSFENKKGGVSGAKLKDIS 485
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
T+ I EMY T ++PII GG+FSG DA EKI+AGAS+ Q+Y+ V++G +IK E
Sbjct: 486 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRE 545
Query: 306 LEELLQKEGYNSVSQAVGAAH 326
L LL + GY ++ +A+G H
Sbjct: 546 LNHLLYQRGYYNLKEAIGRKH 566
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 44/121 (36%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL-------------- 94
I K G A Y +NVSSPNT LR Q +LK+++ +V E + L
Sbjct: 329 INKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNE 388
Query: 95 ------------------------------ALKPLPPILVKIAPDLSLDEKKDIADVVLD 124
K P + VK+APDL+ ++KK+IADV+L+
Sbjct: 389 DNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLE 448
Query: 125 S 125
+
Sbjct: 449 T 449
>gi|395790175|ref|ZP_10469669.1| dihydroorotate dehydrogenase [Bartonella taylorii 8TBB]
gi|395426826|gb|EJF92944.1| dihydroorotate dehydrogenase [Bartonella taylorii 8TBB]
Length = 362
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD + D GI F D+A YF VN+SSPNT +LR LQA+D L L+ + +
Sbjct: 136 INIGANKDTVYKIEDYTAGIAHFYDIADYFTVNISSPNTPSLRALQARDSLHLLMNEISQ 195
Query: 170 TRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDA 227
R++ K PI +KIAPDLS E DIA+ + S DGL+VSNTT+ R D
Sbjct: 196 VRSEQKKKHGLSVPIFLKIAPDLSEKELDDIAEEMKLSD--FDGLVVSNTTLSRQGLTDN 253
Query: 228 RYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQI 287
E GGLSG PL ST ++++M + ++ IIGVGGV + A EK+KAGA L+Q+
Sbjct: 254 LLSGEEGGLSGRPLFELSTIVLAKMRQKLGKEIAIIGVGGVKDAQTALEKVKAGADLIQL 313
Query: 288 YTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Y+ VY GP L I + + +Q++G +++
Sbjct: 314 YSGMVYEGPDLAITILEGILQFMQQDGIDAI 344
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 40 WVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP- 98
+ ++ + GI F D+A YF VN+SSPNT +LR LQA+D L L+ + + R++ K
Sbjct: 146 YKIEDYTAGIAHFYDIADYFTVNISSPNTPSLRALQARDSLHLLMNEISQVRSEQKKKHG 205
Query: 99 -LPPILVKIAPDLSLDEKKDIAD 120
PI +KIAPDLS E DIA+
Sbjct: 206 LSVPIFLKIAPDLSEKELDDIAE 228
>gi|395004501|ref|ZP_10388539.1| dihydroorotate dehydrogenase, subfamily 2 [Acidovorax sp. CF316]
gi|394317558|gb|EJE54088.1| dihydroorotate dehydrogenase, subfamily 2 [Acidovorax sp. CF316]
Length = 351
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR LQ+ + L LL + E R LA + PI VKIAPDLS +
Sbjct: 177 ADYVTVNISSPNTQNLRALQSDEALDGLLGAIAERREVLAKQAGKRTPIFVKIAPDLSEE 236
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ IA + + +DG+I +NTT+ R R+ EETGGLSG P+ S +I ++
Sbjct: 237 QVSVIAATL--QRHGMDGVIATNTTIGRDAVKGLRHAEETGGLSGAPVLEASNNVIRQLR 294
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
G+ PIIGVGGV S DA KI+AGA +VQIYT +Y GP LVTR ++ L
Sbjct: 295 AALGGQFPIIGVGGVMSADDAVSKIRAGADVVQIYTGLIYEGPALVTRAAQAIKAL 350
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR LQ+ + L LL + E R LA + PI VKIAPDLS +
Sbjct: 177 ADYVTVNISSPNTQNLRALQSDEALDGLLGAIAERREVLAKQAGKRTPIFVKIAPDLSEE 236
Query: 114 EKKDIA 119
+ IA
Sbjct: 237 QVSVIA 242
>gi|399027140|ref|ZP_10728731.1| dihydroorotate dehydrogenase, subfamily 2 [Flavobacterium sp.
CF136]
gi|398075376|gb|EJL66494.1| dihydroorotate dehydrogenase, subfamily 2 [Flavobacterium sp.
CF136]
Length = 344
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 118/177 (66%), Gaps = 8/177 (4%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN----QLAVKPLPPILVKIAPD 189
D YFVVNVSSPNT NLR LQ K+ L LL+T+ + RN + + + + PIL+KIAPD
Sbjct: 168 DHVDYFVVNVSSPNTPNLRALQDKEPLTALLQTL-QDRNVEKQKTSAQKIKPILLKIAPD 226
Query: 190 LSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELI 249
L+ ++ DI D+V ++ G+I +NTT+ R + L ++ + E GGLSG+PL +STE+I
Sbjct: 227 LTDEQLLDIIDIV--KTTQIAGVIATNTTISR-DGLQSQNQSEMGGLSGKPLTKRSTEVI 283
Query: 250 SEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + + PIIGVGG+ S DA EK+ AGASLVQ+YT F+Y GP L+ I ++
Sbjct: 284 RFLSEKSNKAFPIIGVGGIHSADDAIEKLNAGASLVQLYTGFIYEGPALIKAINKKV 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN----QLALKPLPPILVKIAPD 109
D YFVVNVSSPNT NLR LQ K+ L LL+T ++ RN + + + + PIL+KIAPD
Sbjct: 168 DHVDYFVVNVSSPNTPNLRALQDKEPLTALLQT-LQDRNVEKQKTSAQKIKPILLKIAPD 226
Query: 110 LSLDEKKDIADVV 122
L+ ++ DI D+V
Sbjct: 227 LTDEQLLDIIDIV 239
>gi|448725658|ref|ZP_21708105.1| dihydroorotate dehydrogenase 2 [Halococcus morrhuae DSM 1307]
gi|445797882|gb|EMA48320.1| dihydroorotate dehydrogenase 2 [Halococcus morrhuae DSM 1307]
Length = 349
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 117/187 (62%), Gaps = 11/187 (5%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT LR LQ ++ L+ +L T+ + P+LVK++PDL+ D +
Sbjct: 172 YFVVNVSSPNTPGLRDLQNREHLERILGTLQDAGAN-------PLLVKLSPDLTDDATAE 224
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
+ + + +DG+I +NTT +R L ++ E GGLSG PL +++T + + + T
Sbjct: 225 A--IAVAEERSLDGIIATNTTTERTSSLRGEHRTEEGGLSGAPLESRATRTVRFVAERTD 282
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNS 317
+P+IGVGGV S DA+ KI+AGASLVQ+YT +Y GP + I L L++++G+ S
Sbjct: 283 --MPVIGVGGVSSAMDAYRKIRAGASLVQLYTGLIYRGPAIAREINRGLLALIERDGFES 340
Query: 318 VSQAVGA 324
V+ AVGA
Sbjct: 341 VADAVGA 347
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 17/96 (17%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT LR LQ ++ L+ +L T+ + P+LVK++PDL+ D +
Sbjct: 172 YFVVNVSSPNTPGLRDLQNREHLERILGTLQDAGAN-------PLLVKLSPDLTDDATAE 224
Query: 118 IADVVLD-SVKGILKFGDVAHYFVVNVSSPNTANLR 152
V + S+ GI+ N ++ T++LR
Sbjct: 225 AIAVAEERSLDGII---------ATNTTTERTSSLR 251
>gi|428214706|ref|YP_007087850.1| dihydroorotate oxidase A [Oscillatoria acuminata PCC 6304]
gi|428003087|gb|AFY83930.1| dihydroorotate oxidase A [Oscillatoria acuminata PCC 6304]
Length = 378
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 131/209 (62%), Gaps = 19/209 (9%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPI 182
L S + + + GD YFVVNVSSPNT LR LQ QL +L ++ NQ VKP I
Sbjct: 179 LGSFRLLKELGD---YFVVNVSSPNTPGLRSLQEGKQLAEILD-ALQQENQ-GVKP---I 230
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKC-KVDGLIVSNTTVDR-------YEYLDARYKEETG 234
LVKIAPDL E + I++ + ++ ++ G+I +NTT+ R EE G
Sbjct: 231 LVKIAPDL---EWEAISEAITVAQTYQLAGMIATNTTIRRDGLKTQTINLTGNPVTEEAG 287
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PLR +STE+I +++ T+G++ IIG GG+F+ +DA+EKI AGA L++IYT +Y
Sbjct: 288 GLSGAPLRGRSTEIIRYIHQQTQGQMLIIGTGGIFTAEDAWEKITAGACLLEIYTGLIYE 347
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GP +V RI + L + L++ G ++++AVG
Sbjct: 348 GPWMVRRILAGLVQKLEENGLANIAEAVG 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
++ YFVVNVSSPNT LR LQ QL +L ++ NQ + PILVKIAPDL +
Sbjct: 187 ELGDYFVVNVSSPNTPGLRSLQEGKQLAEILD-ALQQENQ----GVKPILVKIAPDLEWE 241
>gi|297566288|ref|YP_003685260.1| dihydroorotate dehydrogenase [Meiothermus silvanus DSM 9946]
gi|296850737|gb|ADH63752.1| dihydroorotate dehydrogenase [Meiothermus silvanus DSM 9946]
Length = 363
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 123/197 (62%), Gaps = 11/197 (5%)
Query: 123 LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE-TRNQLAVKPLPP 181
L S++ + +GD YF +NVSSPNT LR+LQ +D+L+ LL V+ R Q K P
Sbjct: 168 LKSLRLLWPYGD---YFAINVSSPNTPGLRQLQDRDRLEELLGAVMGFARAQPEAK---P 221
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+L+KIAPDLS ++ +I + L + + GLI +NTTV R E GGLSG PL
Sbjct: 222 VLLKIAPDLSWEQVDEILE--LAERYGLSGLIATNTTVARDGLTTP--TSEAGGLSGRPL 277
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +S E++ + + +G+LPII VGG+FS +D E+++ GASLVQ+YT F+Y GP ++
Sbjct: 278 RARSLEVLQYLSRQLQGRLPIISVGGIFSPEDVLERLRGGASLVQVYTGFIYEGPFMLRN 337
Query: 302 IKSELEELLQKEGYNSV 318
+ L E L++ G SV
Sbjct: 338 LNRGLLEHLERLGLKSV 354
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE-TRNQLALKPLPPILVKIAPDL 110
+GD YF +NVSSPNT LR+LQ +D+L+ LL V+ R Q K P+L+KIAPDL
Sbjct: 177 YGD---YFAINVSSPNTPGLRQLQDRDRLEELLGAVMGFARAQPEAK---PVLLKIAPDL 230
Query: 111 SLDEKKDIADVV 122
S ++ +I ++
Sbjct: 231 SWEQVDEILELA 242
>gi|372489590|ref|YP_005029155.1| dihydroorotate dehydrogenase, subfamily 2 [Dechlorosoma suillum PS]
gi|359356143|gb|AEV27314.1| dihydroorotate dehydrogenase, subfamily 2 [Dechlorosoma suillum PS]
Length = 353
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 110/167 (65%), Gaps = 4/167 (2%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSL 192
A Y VN+SSPNT NLR LQ D L LL+ + + +LA K P+ +KIAPDL
Sbjct: 177 AASYVTVNISSPNTKNLRDLQRDDALDDLLRQLKAAQARLAEKHGKHTPLALKIAPDLDD 236
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
+ + IAD++ + ++DG+I +NTT+ R RY E GGLSG P+R+ ST++I ++
Sbjct: 237 AQIQAIADLL--RQHRMDGVIATNTTLSRNGVEGCRYGNEAGGLSGAPVRDLSTQVIRKL 294
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
+G++PIIGVGG+ SG DA EKI+AGA LVQIY+ F+Y GP LV
Sbjct: 295 ATALQGEVPIIGVGGILSGADAAEKIEAGAKLVQIYSGFIYRGPDLV 341
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT NLR LQ D L LL+ + + +LA K P+
Sbjct: 167 YLICLEKVYAAASYVTVNISSPNTKNLRDLQRDDALDDLLRQLKAAQARLAEKHGKHTPL 226
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDL + + IAD++
Sbjct: 227 ALKIAPDLDDAQIQAIADLL 246
>gi|428301881|ref|YP_007140187.1| dihydroorotate oxidase A [Calothrix sp. PCC 6303]
gi|428238425|gb|AFZ04215.1| dihydroorotate oxidase A [Calothrix sp. PCC 6303]
Length = 377
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 14/197 (7%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLD 193
D YFVVNVSSPNT LR LQ L +L + + PI VKIAPDL +
Sbjct: 184 DCGEYFVVNVSSPNTPGLRSLQDSASLGLILAALQQENTSQK-----PIFVKIAPDLEWE 238
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY-------KEETGGLSGEPLRNKST 246
+I + L + + G+I +NTT+ R + +EE GG+SG P+R++ST
Sbjct: 239 AISEI--INLATNYNLAGIIATNTTIRRDNLITQTIAKTGKPPQEEAGGISGAPVRDRST 296
Query: 247 ELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
E+I +++ T+ K+PIIGVGG+F+ + A+EKI AGASLVQIYT ++Y GP ++ I L
Sbjct: 297 EIIRYIHQQTQRKIPIIGVGGIFTPEHAWEKITAGASLVQIYTGWLYEGPWMIRHILQGL 356
Query: 307 EELLQKEGYNSVSQAVG 323
L+ +G S+SQA+G
Sbjct: 357 VTKLETQGLTSISQAIG 373
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D YFVVNVSSPNT LR LQ L +L + + PI VKIAPDL +
Sbjct: 184 DCGEYFVVNVSSPNTPGLRSLQDSASLGLILAALQQENTSQK-----PIFVKIAPDLEWE 238
Query: 114 EKKDIADVVLD-SVKGIL 130
+I ++ + ++ GI+
Sbjct: 239 AISEIINLATNYNLAGII 256
>gi|86157720|ref|YP_464505.1| dihydroorotate dehydrogenase 2 [Anaeromyxobacter dehalogenans
2CP-C]
gi|123500096|sp|Q2IQI6.1|PYRD_ANADE RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|85774231|gb|ABC81068.1| dihydroorotate oxidase A [Anaeromyxobacter dehalogenans 2CP-C]
Length = 364
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D + I + A Y VVN+SSPNT LR+LQ ++ L LL+ V R+ P
Sbjct: 153 DAASDYLACIERLHPYADYLVVNISSPNTPGLRQLQEREALDRLLRACV--RHLAERAPG 210
Query: 180 PPILVKIAPDLS---LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGL 236
P+LVK+APDLS LDE D+A + +S V+R+ E GGL
Sbjct: 211 KPLLVKLAPDLSPEALDEAVDVAIAAGAAGIVATNTTLSRAGVERHPR-----AAEAGGL 265
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG PL +TE++ Y G++PI+GVGGV + A+ KI+AGA+LVQ YT +Y GP
Sbjct: 266 SGAPLERLATEVVRRCYARAAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGP 325
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
V R+ + L LL+++G++++S AVGA H+
Sbjct: 326 GFVGRVNAGLARLLERDGFSTLSDAVGADHR 356
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L I + A Y VVN+SSPNT LR+LQ ++ L LL+ V R+ P P+LV
Sbjct: 158 YLACIERLHPYADYLVVNISSPNTPGLRQLQEREALDRLLRACV--RHLAERAPGKPLLV 215
Query: 105 KIAPDLS---LDE 114
K+APDLS LDE
Sbjct: 216 KLAPDLSPEALDE 228
>gi|297198320|ref|ZP_06915717.1| dihydroorotate oxidase [Streptomyces sviceus ATCC 29083]
gi|197714371|gb|EDY58405.1| dihydroorotate oxidase [Streptomyces sviceus ATCC 29083]
Length = 369
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 128/210 (60%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ + D VK + A Y VVNVSSPNT LR LQA + L+ LL V E +++
Sbjct: 156 AEAIGDYVKSAERLAPFADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRIVANR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD----ARYKEETG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L A +ETG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-EGLGLKSAAALMKETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++ +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++FVY
Sbjct: 273 GLSGAPLKERSLEVLRRLYARVGDRITLVGVGGVENAEDAWQRILAGATLVQGYSAFVYE 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP + L L+ Y +++ AVGA
Sbjct: 333 GPFWARAVHKGLAARLRTSPYATLADAVGA 362
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ A Y VVNVSSPNT LR LQA + L+ LL V E +++ P+LVKIAPDL
Sbjct: 168 RLAPFADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRIVANRRVPLLVKIAPDL 227
Query: 111 SLDEKKDIADVVLD-SVKGIL 130
+ ++ +AD+ ++ + GI+
Sbjct: 228 ADEDVDAVADLAVELGLDGII 248
>gi|254391347|ref|ZP_05006551.1| dihydroorotate dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|326440069|ref|ZP_08214803.1| dihydroorotate dehydrogenase 2 [Streptomyces clavuligerus ATCC
27064]
gi|197705038|gb|EDY50850.1| dihydroorotate dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 377
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 3/207 (1%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D V + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 156 AEAVADYVTSTERLAAHADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTSR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD-ARYKEETGGLS 237
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R A ETGGLS
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTISREGLASPAELTAETGGLS 273
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PL+ +S E++ +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y GP
Sbjct: 274 GAPLKERSLEVLRRLYARVGDRITLVGVGGVETAEDAWQRILAGATLVQGYSAFIYQGPF 333
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVGA 324
+ L L Y ++++AVGA
Sbjct: 334 WCRAVHKGLAARLAASPYATLAEAVGA 360
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTSRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|374330066|ref|YP_005080250.1| dihydroorotate oxidase [Pseudovibrio sp. FO-BEG1]
gi|359342854|gb|AEV36228.1| dihydroorotate oxidase [Pseudovibrio sp. FO-BEG1]
Length = 367
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 128/209 (61%), Gaps = 9/209 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LA 175
D V D V G+ +F ++A Y N+SSPNT LR LQ KD L HLL +V R++ L
Sbjct: 151 DRVADYVLGVKRFAELADYLTANISSPNTPGLRDLQEKDALAHLLSAIVNARDEQEDRLG 210
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DARYKEETG 234
K P+++KIAPD++ + K+IA+VV+ +K VDG+IVSNTT+ R L D + +E G
Sbjct: 211 RKV--PVMLKIAPDVTEEALKEIAEVVMANK--VDGMIVSNTTIARPSTLKDQQQAKEAG 266
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL ++T +++ + LP+ GVGGV + + A KI AGA+ +Q+Y+ VY
Sbjct: 267 GLSGAPLFERATIALAKTRRAVGPDLPLFGVGGVDTPEKAAAKIFAGANQIQLYSGMVYE 326
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVG 323
G LV +I L L+ G +++ + VG
Sbjct: 327 GQTLVKKINQHLSRLVAARGVSNLQELVG 355
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++LG+ +F ++A Y N+SSPNT LR LQ KD L HLL +V R++ L P+
Sbjct: 156 YVLGVKRFAELADYLTANISSPNTPGLRDLQEKDALAHLLSAIVNARDEQEDRLGRKVPV 215
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
++KIAPD++ + K+IA+VV+ + V G++
Sbjct: 216 MLKIAPDVTEEALKEIAEVVMANKVDGMI 244
>gi|71281341|ref|YP_269512.1| dihydroorotate dehydrogenase [Colwellia psychrerythraea 34H]
gi|123632188|sp|Q480K7.1|PYRD_COLP3 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|71147081|gb|AAZ27554.1| dihydroorotate dehydrogenase [Colwellia psychrerythraea 34H]
Length = 336
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLS 191
D+A Y VN+SSPNT LR LQ D L LL + + L K P+ VKIAPDL+
Sbjct: 164 DLATYITVNISSPNTPGLRSLQYGDALNELLAALKAEQTILTEKYGKYIPLAVKIAPDLT 223
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
DE K IA ++D+ +DG+I +NTT+ R ++ E GGLSG+P++ KST +I
Sbjct: 224 GDEVKSIAKSLIDNG--IDGVIATNTTLSREGVEGLQFGTEQGGLSGQPVKEKSTLVIKL 281
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + KLPIIGVGG+ S DA EK++AGASLVQ+YT F+Y GPPLV I + L
Sbjct: 282 LSEALNNKLPIIGVGGIASSDDANEKLEAGASLVQVYTGFIYQGPPLVKEIVNGL 336
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L + K D+A Y VN+SSPNT LR LQ D L LL + + L K P+
Sbjct: 155 YLHCMRKVYDLATYITVNISSPNTPGLRSLQYGDALNELLAALKAEQTILTEKYGKYIPL 214
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
VKIAPDL+ DE K IA ++D+ + G++
Sbjct: 215 AVKIAPDLTGDEVKSIAKSLIDNGIDGVI 243
>gi|309782602|ref|ZP_07677325.1| dihydroorotate oxidase [Ralstonia sp. 5_7_47FAA]
gi|308918693|gb|EFP64367.1| dihydroorotate oxidase [Ralstonia sp. 5_7_47FAA]
Length = 344
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++AD +L + K+DG+I +NTT+ R + + EE GGLSG+P+R ST +I ++
Sbjct: 232 QIANVADALL--RHKMDGVIATNTTISREAVVGLAHAEEAGGLSGQPVREGSTRVIRALH 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP L+ L
Sbjct: 290 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPALIAECARAL 342
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ ++AD +L
Sbjct: 232 QIANVADALL 241
>gi|331005192|ref|ZP_08328587.1| Dihydroorotate dehydrogenase [gamma proteobacterium IMCC1989]
gi|330420997|gb|EGG95268.1| Dihydroorotate dehydrogenase [gamma proteobacterium IMCC1989]
Length = 342
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%), Gaps = 4/170 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ D L LL+ + + QL+ + P+L+KIAPD++ +
Sbjct: 165 ADYITVNISSPNTPGLRNLQFGDNLDRLLEGLAIKQAQLSEQHGRRVPVLIKIAPDMNEE 224
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E I+ L K KVDG+I +NTT+D+ D+ + EE GGLSG PL +ST +I ++
Sbjct: 225 EVASISQTFL--KHKVDGVIATNTTLDKSTVSDSPHAEEMGGLSGAPLTQQSTLVIKQLR 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
G +PIIGVGG+ G DA EK+ AGA+LVQ+Y+ F+Y GP L+T I+
Sbjct: 283 AHLGGDMPIIGVGGIQQGSDAIEKLTAGANLVQVYSGFIYRGPALITDIR 332
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ D L LL+ + + QL+ + P+L+KIAPD++ +
Sbjct: 165 ADYITVNISSPNTPGLRNLQFGDNLDRLLEGLAIKQAQLSEQHGRRVPVLIKIAPDMNEE 224
Query: 114 EKKDIADVVL 123
E I+ L
Sbjct: 225 EVASISQTFL 234
>gi|453051189|gb|EME98703.1| dihydroorotate dehydrogenase 2 [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 374
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 9/215 (4%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D V + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 159 AEAVADYVTSTERLAAHADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTDR 218
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET----- 233
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L R + T
Sbjct: 219 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-EGLGLRTPQRTVEAIG 275
Query: 234 -GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL+ +S E++ +Y ++ ++GVGGV + D +E+I AGA+LVQ Y++F+
Sbjct: 276 AGGLSGAPLKQRSLEVLRRLYARVGDRITLVGVGGVETADDVWERILAGATLVQGYSAFI 335
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
Y GP I L E L Y +++ AVGA H+
Sbjct: 336 YEGPFWCRAIHRGLAERLAASPYATLADAVGAEHR 370
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 176 ADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTDRRVPLLVKIAPDLADEDV 235
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 236 DAVADLAVELGLDGII 251
>gi|448358340|ref|ZP_21547023.1| dihydroorotate dehydrogenase 2 [Natrialba chahannaoensis JCM 10990]
gi|445646123|gb|ELY99114.1| dihydroorotate dehydrogenase 2 [Natrialba chahannaoensis JCM 10990]
Length = 356
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A Y VVNVS PNT + + + L+ + +T+ + N L V PILVKI PD +
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLREIFETI-DAENDLDV----PILVKIGPDEPEESI 227
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
D+ D+V + +DG++ +NT+ R E L + +EE GGLSG+P+ ++ST++I +
Sbjct: 228 LDLVDIV--QEFDIDGIVATNTSTAR-EGLASAKREEWGGLSGKPVESRSTDVIRTIADH 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T G LPIIGVGGV S A+ KI+AGASLVQ+YT FVY GP RI L LL+++G+
Sbjct: 285 TDGDLPIIGVGGVDSAASAYRKIRAGASLVQLYTGFVYQGPSTAKRINRGLVRLLERDGF 344
Query: 316 NSVSQAVGAAHK 327
S+ AVGA K
Sbjct: 345 TSIEAAVGAELK 356
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVS PNT + + + L+ + +T ++ N L + PILVKI PD +
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLREIFET-IDAENDLDV----PILVKIGPDEPEESI 227
Query: 116 KDIADVVLD-SVKGIL 130
D+ D+V + + GI+
Sbjct: 228 LDLVDIVQEFDIDGIV 243
>gi|325285040|ref|YP_004260830.1| Dihydroorotate dehydrogenase [Cellulophaga lytica DSM 7489]
gi|324320494|gb|ADY27959.1| Dihydroorotate dehydrogenase [Cellulophaga lytica DSM 7489]
Length = 345
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 115/175 (65%), Gaps = 10/175 (5%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN-----QLAVKPLPPILVKIAPDLSL 192
YFVVNVSSPNT LR+LQ K+ L +LL +V T N Q VK PIL+KIAPDL+
Sbjct: 171 YFVVNVSSPNTPGLRELQDKEPLTNLLNALV-TENKKYVTQKGVKA-KPILLKIAPDLTN 228
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR-YKEETGGLSGEPLRNKSTELISE 251
++ DI D+V + K++G+I +NTT++R +E GGLSG+PL N+STE+I
Sbjct: 229 EQLLDIIDIV--AITKINGVIATNTTIERNNLKSPESITKENGGLSGKPLTNRSTEVIRF 286
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + + PIIGVGG+ S KDA EKI AGA L+QIYT F+Y GP L+ RI +
Sbjct: 287 LAEKSNKAFPIIGVGGIHSEKDALEKINAGADLIQIYTGFIYEGPRLIKRINKAI 341
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVV-ETRNQLALKPL--PPILVKIAPDLSLDE 114
YFVVNVSSPNT LR+LQ K+ L +LL +V E + + K + PIL+KIAPDL+ ++
Sbjct: 171 YFVVNVSSPNTPGLRELQDKEPLTNLLNALVTENKKYVTQKGVKAKPILLKIAPDLTNEQ 230
Query: 115 KKDIADVV-LDSVKGIL 130
DI D+V + + G++
Sbjct: 231 LLDIIDIVAITKINGVI 247
>gi|448536556|ref|ZP_21622539.1| dihydroorotate dehydrogenase 2 [Halorubrum hochstenium ATCC 700873]
gi|445702431|gb|ELZ54382.1| dihydroorotate dehydrogenase 2 [Halorubrum hochstenium ATCC 700873]
Length = 351
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 132/232 (56%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V I ++ + +A+ D + + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPDVPVGI--NIGKSKSTPLAEAPDDYLYTYERVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ L+ +L T+ + P+LVK++PDL D VV D +DG+
Sbjct: 189 ELQNREALERILGTLDDAGAD-------PLLVKLSPDLPEPAVADALAVVDD--LDLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + E GGLSG+P+ + +TE + + + T +P+IGVGGV
Sbjct: 240 IATNTTTSRPDSLRGHNRAERGGLSGKPIESLATERVRFVAERTD--VPVIGVGGVSDAA 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLVQ YT VY GP L I L ELL ++G++SV AVGA
Sbjct: 298 GAYEKIRAGASLVQAYTGLVYEGPGLARDINEGLLELLDRDGFDSVEDAVGA 349
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 2 VGLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVV 61
+G + R+ R+ R N+ S + A +L + D YFVV
Sbjct: 118 MGFNNEGADRVGERLDRDPLPDVPVGINIGKSKSTPLAEAPDDYLYTYERVADAGDYFVV 177
Query: 62 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADV 121
NVSSPNT LR+LQ ++ L+ +L T+ + P+LVK++PDL D V
Sbjct: 178 NVSSPNTPGLRELQNREALERILGTLDDAGAD-------PLLVKLSPDLPEPAVADALAV 230
Query: 122 VLD 124
V D
Sbjct: 231 VDD 233
>gi|241663196|ref|YP_002981556.1| dihydroorotate dehydrogenase 2 [Ralstonia pickettii 12D]
gi|240865223|gb|ACS62884.1| dihydroorotate dehydrogenase [Ralstonia pickettii 12D]
Length = 365
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 193 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 252
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++AD +L + K+DG+I +NTT+ R + + EE GGLSG+P+R ST +I ++
Sbjct: 253 QIANVADALL--RHKMDGVIATNTTISREAVVGLAHAEEAGGLSGQPVREGSTRVIRALH 310
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP L+ L
Sbjct: 311 SLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPALIAECARAL 363
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 193 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 252
Query: 114 EKKDIADVVL 123
+ ++AD +L
Sbjct: 253 QIANVADALL 262
>gi|406677095|ref|ZP_11084280.1| dihydroorotate dehydrogenase [Aeromonas veronii AMC35]
gi|423201579|ref|ZP_17188158.1| dihydroorotate dehydrogenase [Aeromonas veronii AER39]
gi|404616611|gb|EKB13564.1| dihydroorotate dehydrogenase [Aeromonas veronii AER39]
gi|404625409|gb|EKB22226.1| dihydroorotate dehydrogenase [Aeromonas veronii AMC35]
Length = 336
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 130/227 (57%), Gaps = 14/227 (6%)
Query: 82 HLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVV 141
HL+ V E + Q + I + D +++ KD + +D V D A Y V
Sbjct: 122 HLVAKVKEAKYQGVIG----INIGKNKDTPIEQGKDDYLICMDKVY------DHAGYIAV 171
Query: 142 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLDEKKDIA 199
N+SSPNT LR LQ + L LL + + +LA K P+ VKIAPDLSL+E +A
Sbjct: 172 NISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPLAVKIAPDLSLEEIDQVA 231
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
++ + +DG+I +NTT++R D + E GGLSG PL++KSTE+I + K G
Sbjct: 232 ASLV--RNGIDGVIATNTTLEREMIYDMPHAGEAGGLSGRPLQHKSTEVIRHLAKALNGA 289
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
LPIIGVGG+ S A EK+ AGASLVQIY+ F+Y GP LV I + +
Sbjct: 290 LPIIGVGGIDSAMAAREKLAAGASLVQIYSGFIYKGPGLVKEIVTNI 336
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDLSL+E + A +V + + G++
Sbjct: 215 AVKIAPDLSLEEIDQVAASLVRNGIDGVI 243
>gi|27376251|ref|NP_767780.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium japonicum USDA 110]
gi|81841954|sp|Q89VA7.1|PYRD_BRAJA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|27349391|dbj|BAC46405.1| dihydroorotate dehydrogenase [Bradyrhizobium japonicum USDA 110]
Length = 365
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 130/212 (61%), Gaps = 6/212 (2%)
Query: 116 KDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA 175
KD D V D VK I F VA YF +NVSSPNT LR LQ L LL V++ R ++
Sbjct: 144 KDSPDRVGDYVKLIEAFAPVASYFTINVSSPNTPGLRNLQEGALLDDLLARVIDARERVR 203
Query: 176 VKPL-PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL--DARYKEE 232
K P+L+KIAPDLSL + D+ V +VDG+IVSNTT+ R L + R KE+
Sbjct: 204 QKAGDTPVLLKIAPDLSLAQLDDVVQVA--RSRRVDGMIVSNTTIARPSTLREEMRAKEQ 261
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG PL ST +++E Y +G P++GVGGV SG A KI+AGASL+Q+Y+S V
Sbjct: 262 -GGLSGRPLFRLSTRMVAETYVRVEGAFPLVGVGGVDSGGAALTKIRAGASLIQLYSSLV 320
Query: 293 YHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
Y G LV IK +L L + G +S+S VGA
Sbjct: 321 YKGLGLVEEIKRDLTSTLLRTGRDSLSDIVGA 352
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL-PPILVKIA 107
I F VA YF +NVSSPNT LR LQ L LL V++ R ++ K P+L+KIA
Sbjct: 157 IEAFAPVASYFTINVSSPNTPGLRNLQEGALLDDLLARVIDARERVRQKAGDTPVLLKIA 216
Query: 108 PDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR-KLQAKDQ 159
PDLSL + LD V + + V V N + + LR +++AK+Q
Sbjct: 217 PDLSLAQ--------LDDVVQVARSRRVDGMIVSNTTIARPSTLREEMRAKEQ 261
>gi|448457619|ref|ZP_21595795.1| dihydroorotate dehydrogenase 2 [Halorubrum lipolyticum DSM 21995]
gi|445810314|gb|EMA60341.1| dihydroorotate dehydrogenase 2 [Halorubrum lipolyticum DSM 21995]
Length = 351
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 137/236 (58%), Gaps = 21/236 (8%)
Query: 93 QLALKPLP--PILVKIAPDLS--LDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNT 148
+L KPLP P+ + I S LDE D D + + D YFVVNVSSPNT
Sbjct: 131 RLDGKPLPEVPVGINIGKSKSTPLDEAPD------DYLYTYERVADAGDYFVVNVSSPNT 184
Query: 149 ANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCK 208
LR+LQ ++ L+ +L T+ + P+LVK++PDL +D VV D
Sbjct: 185 PGLRELQNREALEGILGTLADAGAA-------PLLVKLSPDLPEPAVEDALGVVDD--LG 235
Query: 209 VDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGV 268
+DG+I +NTT R L + + E+GGLSG+P+ +TE + + + T +P+IGVGG+
Sbjct: 236 LDGVIATNTTTARPNSLKSPQQAESGGLSGKPIEPIATERVRFVAERTD--VPVIGVGGI 293
Query: 269 FSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ K A+EKI+AGAS+VQ+YT VY GP L I + +LL ++G++SV AVGA
Sbjct: 294 SNAKGAYEKIRAGASIVQLYTGLVYEGPGLAREINEGILDLLDRDGFDSVVDAVGA 349
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LV
Sbjct: 161 YLYTYERVADAGDYFVVNVSSPNTPGLRELQNREALEGILGTLADAGAA-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++PDL +D VV D
Sbjct: 214 KLSPDLPEPAVEDALGVVDD 233
>gi|404396162|ref|ZP_10987957.1| dihydroorotate dehydrogenase [Ralstonia sp. 5_2_56FAA]
gi|348614913|gb|EGY64449.1| dihydroorotate dehydrogenase [Ralstonia sp. 5_2_56FAA]
Length = 365
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 193 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 252
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++AD +L + K+DG+I +NTT+ R + + EE GGLSG+P+R ST +I ++
Sbjct: 253 QIANVADALL--RHKMDGVIATNTTISREAVVGLAHAEEAGGLSGQPVREGSTRVIRALH 310
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP L+ L
Sbjct: 311 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPALIAECARAL 363
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 193 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 252
Query: 114 EKKDIADVVL 123
+ ++AD +L
Sbjct: 253 QIANVADALL 262
>gi|114569069|ref|YP_755749.1| dihydroorotate dehydrogenase 2 [Maricaulis maris MCS10]
gi|114339531|gb|ABI64811.1| dihydroorotate oxidase A [Maricaulis maris MCS10]
Length = 343
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 129/216 (59%), Gaps = 16/216 (7%)
Query: 111 SLDEKKDIADVV--LDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
+L+ + IAD V LD++K D+A +F VNVSSPNT LR LQ+ L LL V
Sbjct: 141 NLESEDRIADYVACLDALK------DLAQFFTVNVSSPNTPGLRTLQSSGALDDLLAAVA 194
Query: 169 ETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+ V +KIAPD+ D + D+ V ++ K+DG+I+SNTT+ R E L +
Sbjct: 195 AVGAKAPV------FLKIAPDIE-DAEADVM-VAAITRHKLDGIIISNTTITRPETLVSA 246
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E GGLSG P+ +STEL+ K + IIGVGGV + A+ KI+AGA+ +Q+Y
Sbjct: 247 NMGEGGGLSGPPVFARSTELVRAFRKAAGPDMAIIGVGGVSCAETAYAKIRAGANAIQLY 306
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
T+ +Y GP L+ RIK L E LQ +G+ SV+ AVGA
Sbjct: 307 TAMIYEGPGLIQRIKRGLVERLQVDGFASVADAVGA 342
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 11 RILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTAN 70
R++ R R G G N L S R+ +V L LK D+A +F VNVSSPNT
Sbjct: 123 RLVRRSARLGVVGVNLGAN-LESEDRIADYV---ACLDALK--DLAQFFTVNVSSPNTPG 176
Query: 71 LRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDI 118
LR LQ+ L LL V + + +KIAPD+ D + D+
Sbjct: 177 LRTLQSSGALDDLLAAVAAVGAKAP------VFLKIAPDIE-DAEADV 217
>gi|119385609|ref|YP_916664.1| dihydroorotate dehydrogenase 2 [Paracoccus denitrificans PD1222]
gi|119376204|gb|ABL70968.1| dihydroorotate oxidase A [Paracoccus denitrificans PD1222]
Length = 352
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 124/204 (60%), Gaps = 5/204 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L++ KD AD D + + G A + VNVSSPNT LR LQ + L LL+ V+
Sbjct: 138 LNIGANKDSADRSADFAQVVRIAGAHADFLTVNVSSPNTEKLRDLQGPEALSALLQGVLA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R+ L +P P+ +KIAPDL D+ + VD +I +NTT+ R + L + +
Sbjct: 198 ARDALPNRP--PVFIKIAPDL--DDTALADIAAVALAAPVDAIIATNTTLSR-DGLASPH 252
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL +++T +++ +Y+ T G++P+IGVGG+ S + A++K++AGAS VQIY+
Sbjct: 253 ANEAGGLSGAPLFDRATRILARLYRETGGRVPLIGVGGIGSAEQAWQKLRAGASAVQIYS 312
Query: 290 SFVYHGPPLVTRIKSELEELLQKE 313
+ VY G L +I +L+E L +E
Sbjct: 313 ALVYQGFSLAAQIARDLDERLARE 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 53 GDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
G A + VNVSSPNT LR LQ + L LL+ V+ R+ AL PP+ +KIAPDL
Sbjct: 161 GAHADFLTVNVSSPNTEKLRDLQGPEALSALLQGVLAARD--ALPNRPPVFIKIAPDL 216
>gi|448314589|ref|ZP_21504275.1| dihydroorotate dehydrogenase 2 [Natronolimnobius innermongolicus
JCM 12255]
gi|445594683|gb|ELY48832.1| dihydroorotate dehydrogenase 2 [Natronolimnobius innermongolicus
JCM 12255]
Length = 358
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 121/189 (64%), Gaps = 8/189 (4%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A Y VVNVS PNT + + + L+ + +T+ E N V P+LVKI PD D
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLRAIFETL-EAENDADV----PMLVKIGPDEPEDAI 227
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
D+ D+V + +DG++ +NT+ R E L++ +EE GGLSG+P+ ++ST +I + +
Sbjct: 228 LDLVDIV--QEFGLDGIVATNTSTSR-EGLESPNQEEWGGLSGDPIEDRSTAVIRSIAEH 284
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGY 315
T G+LPI+GVGGV S A+ KI+AGASLVQ+YT FVY GP RI L LL+++G+
Sbjct: 285 TDGELPIVGVGGVDSPGSAYAKIRAGASLVQLYTGFVYQGPSTAKRINRGLVALLERDGF 344
Query: 316 NSVSQAVGA 324
+SV +AVGA
Sbjct: 345 SSVEEAVGA 353
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVS PNT + + + L+ + +T +E N + P+LVKI PD D
Sbjct: 173 ADYVVVNVSCPNTPDEFDEASPEHLRAIFET-LEAENDADV----PMLVKIGPDEPEDAI 227
Query: 116 KDIADVV 122
D+ D+V
Sbjct: 228 LDLVDIV 234
>gi|357403971|ref|YP_004915895.1| dihydroorotate dehydrogenase [Methylomicrobium alcaliphilum 20Z]
gi|351716636|emb|CCE22298.1| dihydroorotate dehydrogenase [Methylomicrobium alcaliphilum 20Z]
Length = 337
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + G+ K A Y +N+SSPNT NLR+LQ +++K L+ + E + +L + P
Sbjct: 155 DYLIGLRKAYRAAGYITINISSPNTKNLRQLQQGNEIKGLIAALKEEQVKLQREHGKYTP 214
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+ +KIAPDL+ DE + IA ++L+ ++D +I +NTT+ R + EE GGLSG P+
Sbjct: 215 LALKIAPDLTPDEIRHIAALLLE--FEIDAVIATNTTIARNAIAGHKLAEEAGGLSGGPV 272
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ KSTE+++ + GKLPII GG+ SG DA EKI+AGASLVQ+Y+ +Y+GP LV
Sbjct: 273 KQKSTEVVAALAAELNGKLPIIAAGGILSGDDALEKIQAGASLVQVYSGLIYNGPELVVD 332
Query: 302 I 302
I
Sbjct: 333 I 333
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 2 VGLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVV 61
+G + +L+RV G N+ +F + +L+G+ K A Y +
Sbjct: 114 MGFNNKGIDHLLNRVEHCQYKGVLGI-NIGKNFDTPIEKAAEDYLIGLRKAYRAAGYITI 172
Query: 62 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDLSLDEKKDIA 119
N+SSPNT NLR+LQ +++K L+ + E + +L + P+ +KIAPDL+ DE + IA
Sbjct: 173 NISSPNTKNLRQLQQGNEIKGLIAALKEEQVKLQREHGKYTPLALKIAPDLTPDEIRHIA 232
Query: 120 DVVLD 124
++L+
Sbjct: 233 ALLLE 237
>gi|406915469|gb|EKD54548.1| hypothetical protein ACD_60C00071G0006 [uncultured bacterium]
Length = 338
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 116/183 (63%), Gaps = 4/183 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ--LAVKPLPP 181
D V G + A Y +N+SSPNTA+LR LQ D LK LL+ + + + + LA K P
Sbjct: 152 DYVVGFQRVAPFASYVTINISSPNTADLRNLQQADLLKLLLQVLKQEQKKYFLANKKYVP 211
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
++VKI+PDL+ +E +ADV L+ +DG+I +NTTV R LD E GGLSG PL
Sbjct: 212 LVVKISPDLTYEELTVMADVFLEQN--IDGVIATNTTVSREGVLDLSLAHEAGGLSGRPL 269
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+STE+I ++ + + ++PIIG GG+FS DA K AGASL+QIYT FVY GP L+
Sbjct: 270 AKRSTEVIQQLAPILREQIPIIGCGGIFSSGDAKAKFAAGASLIQIYTGFVYQGPRLILE 329
Query: 302 IKS 304
I +
Sbjct: 330 IAN 332
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 43 QFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ--LALKPLP 100
Q +++G + A Y +N+SSPNTA+LR LQ D LK LL+ + + + + LA K
Sbjct: 151 QDYVVGFQRVAPFASYVTINISSPNTADLRNLQQADLLKLLLQVLKQEQKKYFLANKKYV 210
Query: 101 PILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
P++VKI+PDL+ +E +ADV L+ ++ G++
Sbjct: 211 PLVVKISPDLTYEELTVMADVFLEQNIDGVI 241
>gi|406707915|ref|YP_006758267.1| dihydroorotate oxidase A [alpha proteobacterium HIMB59]
gi|406653691|gb|AFS49090.1| dihydroorotate oxidase A [alpha proteobacterium HIMB59]
Length = 347
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 132/217 (60%), Gaps = 14/217 (6%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR---KLQAKDQLKHLLKT 166
+++ K+ +++ D K + + Y V+N+SSPNT LR K Q+ +++ + L
Sbjct: 139 INIGNNKETKEIIEDLEKLFDRLYRLGDYIVINLSSPNTPGLRENLKSQSFEKIVNHLHK 198
Query: 167 VVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ E N PIL KI+PD+S EKKDIA + L + VDGLI++NT++D+
Sbjct: 199 LREKNNSKI-----PILFKISPDISEQEKKDIALISLAND--VDGLILTNTSIDK----S 247
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E GG+SG PL KS ++I + Y LT GK+ IIGVGG+F+ D K+K GASLVQ
Sbjct: 248 TLGIEMNGGISGRPLFYKSNKIIRDFYTLTSGKIKIIGVGGIFTANDILTKMKLGASLVQ 307
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+Y+SF Y GP + +I +L L+Q++GY ++S+ +G
Sbjct: 308 LYSSFTYQGPYHIKKITLDLMALIQQQGYRNISEVIG 344
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLR---KLQAKDQLKHLLKTVVETRNQLALKPLPPILVK 105
+ + GD Y V+N+SSPNT LR K Q+ +++ + L + E N PIL K
Sbjct: 161 LYRLGD---YIVINLSSPNTPGLRENLKSQSFEKIVNHLHKLREKNNSKI-----PILFK 212
Query: 106 IAPDLSLDEKKDIADVVL-DSVKGIL 130
I+PD+S EKKDIA + L + V G++
Sbjct: 213 ISPDISEQEKKDIALISLANDVDGLI 238
>gi|378821851|ref|ZP_09844701.1| dihydroorotate oxidase [Sutterella parvirubra YIT 11816]
gi|378599328|gb|EHY32366.1| dihydroorotate oxidase [Sutterella parvirubra YIT 11816]
Length = 394
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 13/174 (7%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV-------ETRNQLAVKPLPPILVKI 186
D A Y VN+SSPNT NLR LQ + +L++L+K + E RN V PI VK+
Sbjct: 212 DHADYIAVNISSPNTKNLRALQGESELENLVKGITAKREALKEARNGKHV----PIAVKL 267
Query: 187 APDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKST 246
APDL DE D ++ +DG+I +NTT+ R ++ +ETGGLSG PLR +ST
Sbjct: 268 APDLENDEILRCVDTLM--AHGIDGVIATNTTIARKRVEGLQHAQETGGLSGAPLRERST 325
Query: 247 ELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
E++ + KG+LPII GGV +GKDA EK++AGA LVQ++T F+Y+GP LV
Sbjct: 326 EVVRLIADHVKGELPIIASGGVMTGKDAVEKMEAGAQLVQLFTGFIYNGPKLVA 379
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 18/109 (16%)
Query: 20 GEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQ 79
G+ TP N LS + + V D A Y VN+SSPNT NLR LQ + +
Sbjct: 189 GKNAVTPIENALSDYEKCLDAVY-----------DHADYIAVNISSPNTKNLRALQGESE 237
Query: 80 LKHLLKTVVETRNQLALKPLP-----PILVKIAPDLSLDEKKDIADVVL 123
L++L+K + R ALK PI VK+APDL DE D ++
Sbjct: 238 LENLVKGITAKRE--ALKEARNGKHVPIAVKLAPDLENDEILRCVDTLM 284
>gi|341613316|ref|ZP_08700185.1| dihydroorotate dehydrogenase 2 [Citromicrobium sp. JLT1363]
Length = 344
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 123/215 (57%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D +A Y VN+SSPNT LR LQA D LK LL V E
Sbjct: 135 INIGANKDSDDRIADYALLTELMAPLASYLTVNISSPNTPGLRNLQAGDALKDLLDGVFE 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R + P+ +K+APDL E IA + DS LI+SNTT+ R L +++
Sbjct: 195 ARGERTT----PVFLKLAPDLEPKEIDAIAKIAGDSPLAA--LIISNTTLARPP-LRSKH 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL + + + + K T G++P+I GG+ S A+E+I AGASLVQ+Y+
Sbjct: 248 ALEAGGLSGAPLAPIALQRLKDFRKATGGQIPLIAAGGIDSADAAWERIVAGASLVQLYS 307
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP L RI L++ LQ+ G+ S+ +A+G+
Sbjct: 308 AMVYQGPTLGRRIARGLKQRLQRAGFASIEEAIGS 342
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 3 GLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVN 62
G ++ R+ RV R G G N S R+ + L L+ L A Y VN
Sbjct: 114 GGAQAAHERLRKRVGRPGVVGINIGANK-DSDDRIADYALLTELMAPL-----ASYLTVN 167
Query: 63 VSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVV 122
+SSPNT LR LQA D LK LL V E R + P+ +K+APDL E IA +
Sbjct: 168 ISSPNTPGLRNLQAGDALKDLLDGVFEARGERTT----PVFLKLAPDLEPKEIDAIAKIA 223
Query: 123 LDS 125
DS
Sbjct: 224 GDS 226
>gi|431797171|ref|YP_007224075.1| dihydroorotate dehydrogenase, subfamily 2 [Echinicola vietnamensis
DSM 17526]
gi|430787936|gb|AGA78065.1| dihydroorotate dehydrogenase, subfamily 2 [Echinicola vietnamensis
DSM 17526]
Length = 348
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL +VV+ RN P PIL+KIAPDLS + D
Sbjct: 175 YFVVNVSSPNTPNLRDLQEKEPLKELL-SVVKERNDQKDHP-KPILLKIAPDLSDGQLDD 232
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEY-LDARYKEE--TGGLSGEPLRNKSTELISEMYK 254
I ++V + ++DG+I +NTT+DR D + E GG+SG+ L +STE+I + +
Sbjct: 233 IIEIV--KETQIDGVIATNTTIDRTALKTDPQQVEALGAGGVSGKVLGKRSTEVIRYLSE 290
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQK 312
+ PIIGVGG+FS +DA EK++AGASLVQ+Y+ +Y GP L+ IK L+E K
Sbjct: 291 HSGKAFPIIGVGGIFSAQDAIEKLEAGASLVQVYSGMIYEGPGLMKAIKKGLKEYYNK 348
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ LK LL +VV+ RN P PIL+KIAPDLS + D
Sbjct: 175 YFVVNVSSPNTPNLRDLQEKEPLKELL-SVVKERNDQKDHP-KPILLKIAPDLSDGQLDD 232
Query: 118 IADVVLDS-VKGIL 130
I ++V ++ + G++
Sbjct: 233 IIEIVKETQIDGVI 246
>gi|393725590|ref|ZP_10345517.1| dihydroorotate dehydrogenase 2 [Sphingomonas sp. PAMC 26605]
Length = 348
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 121/214 (56%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D G+ VA Y VN+SSPNT LR LQ ++L +L E
Sbjct: 136 VNVGANKDAPDRVADYAHGVAAAARVADYVTVNISSPNTPGLRDLQHGNELLDVLAAADE 195
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R +P + +K+APDL IA + VD LIVSNTT+ R L + +
Sbjct: 196 ARRAPIERPR--LFLKVAPDLDPSAIDFIARAA--AAHHVDALIVSNTTISR-PALRSAH 250
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG PL + + +++ T G +P+I GG+ S +A+ +I+AGASLVQ+YT
Sbjct: 251 AGETGGLSGAPLAGLARQRLADFRGATGGAMPLISAGGIDSADEAYARIRAGASLVQLYT 310
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VYHGP L RI L + L ++G+ +V+ AVG
Sbjct: 311 ALVYHGPGLAQRILRGLAKRLARDGFATVADAVG 344
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+ G+ VA Y VN+SSPNT LR LQ ++L +L E R +P + +
Sbjct: 151 YAHGVAAAARVADYVTVNISSPNTPGLRDLQHGNELLDVLAAADEARRAPIERPR--LFL 208
Query: 105 KIAPDL 110
K+APDL
Sbjct: 209 KVAPDL 214
>gi|423206641|ref|ZP_17193197.1| dihydroorotate dehydrogenase [Aeromonas veronii AMC34]
gi|404622193|gb|EKB19058.1| dihydroorotate dehydrogenase [Aeromonas veronii AMC34]
Length = 336
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 130/227 (57%), Gaps = 14/227 (6%)
Query: 82 HLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVV 141
HL+ V E + Q + I + D +++ KD + +D V D A Y V
Sbjct: 122 HLVAKVKEAKYQGVIG----INIGKNKDTPIEQGKDDYLICMDKVY------DHAGYIAV 171
Query: 142 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLDEKKDIA 199
N+SSPNT LR LQ + L LL + + +LA K P+ VKIAPDLSL+E +A
Sbjct: 172 NISSPNTPGLRSLQYGEALDELLAALKVRQQELAAKYKKYVPLAVKIAPDLSLEEIDQVA 231
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
++ + +DG+I +NTT++R D + E GGLSG PL++KSTE+I + K G
Sbjct: 232 ASLV--RNGIDGVIATNTTLEREMIYDMPHAGEAGGLSGRPLQHKSTEVIRHLAKALNGA 289
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
LPIIGVGG+ S A EK+ AGASLVQIY+ F+Y GP LV I + +
Sbjct: 290 LPIIGVGGIDSAMAAREKLAAGASLVQIYSGFIYKGPGLVKEIVTNI 336
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAKYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDLSL+E + A +V + + G++
Sbjct: 215 AVKIAPDLSLEEIDQVAASLVRNGIDGVI 243
>gi|294811545|ref|ZP_06770188.1| Dihydroorotate dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|294324144|gb|EFG05787.1| Dihydroorotate dehydrogenase, partial [Streptomyces clavuligerus
ATCC 27064]
Length = 385
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 3/207 (1%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D V + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 164 AEAVADYVTSTERLAAHADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTSR 223
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD-ARYKEETGGLS 237
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R A ETGGLS
Sbjct: 224 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTISREGLASPAELTAETGGLS 281
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G PL+ +S E++ +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y GP
Sbjct: 282 GAPLKERSLEVLRRLYARVGDRITLVGVGGVETAEDAWQRILAGATLVQGYSAFIYQGPF 341
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVGA 324
+ L L Y ++++AVGA
Sbjct: 342 WCRAVHKGLAARLAASPYATLAEAVGA 368
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 181 ADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTSRRVPLLVKIAPDLADEDV 240
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 241 DAVADLAVELGLDGII 256
>gi|220924404|ref|YP_002499706.1| dihydroorotate dehydrogenase 2 [Methylobacterium nodulans ORS 2060]
gi|254788894|sp|B8ID11.1|PYRD_METNO RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|219949011|gb|ACL59403.1| dihydroorotate dehydrogenase [Methylobacterium nodulans ORS 2060]
Length = 359
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 120/206 (58%), Gaps = 3/206 (1%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V + + VNVSSPNT LR LQ + L LL VV
Sbjct: 138 VNIGANKDATDRLADYVACTRALAGLVDFVTVNVSSPNTPGLRDLQGEVFLDDLLARVVA 197
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL-DAR 228
R++ A IL+KIAPD++LD I L + V+GL++SNTTV R L +
Sbjct: 198 ARDEAASPRRAAILLKIAPDITLDSLDAITATAL--RRGVEGLVISNTTVARPASLTETT 255
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E GGLSG PL ST L++E + +LP++GVGGV S + A+ KI+AGASLVQ+Y
Sbjct: 256 LAAEAGGLSGRPLFAPSTRLLAEAFLRVGDRLPLVGVGGVDSAEAAWTKIRAGASLVQLY 315
Query: 289 TSFVYHGPPLVTRIKSELEELLQKEG 314
++ VY GP LV IK+ L E + +EG
Sbjct: 316 SALVYAGPGLVREIKAGLVERIAREG 341
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ + L LL VV R++ A IL+KIAPD++LD
Sbjct: 166 FVTVNVSSPNTPGLRDLQGEVFLDDLLARVVAARDEAASPRRAAILLKIAPDITLDSLDA 225
Query: 118 IADVVL 123
I L
Sbjct: 226 ITATAL 231
>gi|84514403|ref|ZP_01001767.1| dihydroorotate dehydrogenase [Loktanella vestfoldensis SKA53]
gi|84511454|gb|EAQ07907.1| dihydroorotate dehydrogenase [Loktanella vestfoldensis SKA53]
Length = 350
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 7/217 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L KD D D + G + VNVSSPNT LR LQ K L LL V+E
Sbjct: 137 LNLGANKDSTDKAADFATVLAHCGPHVDFATVNVSSPNTEKLRDLQGKAALAALLAGVME 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
TR +A P+ +KIAPDL+ +E +IA+V + G+I +NTT+DR L +
Sbjct: 197 TRAGMARAI--PVFLKIAPDLTGEEIAEIAEVA--QAAGIAGIIATNTTLDRTG-LHGPH 251
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+E GGLSG+PL KST +++++ LT LPIIGVGGV + A++KI+AGA VQ+YT
Sbjct: 252 TQEKGGLSGQPLFEKSTRVLAQLSALTD--LPIIGVGGVATADQAYQKIRAGACAVQLYT 309
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAH 326
+ VY G LV I L+ LL ++G+ S++ AVG+
Sbjct: 310 ALVYGGLSLVDDIARGLDALLLRDGFASLADAVGSGR 346
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL V+ETR +A P+ +KIAPDL+ +E +
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALAALLAGVMETRAGMARA--IPVFLKIAPDLTGEEIAE 222
Query: 118 IADVV 122
IA+V
Sbjct: 223 IAEVA 227
>gi|383625443|ref|ZP_09949849.1| dihydroorotate dehydrogenase 2 [Halobiforma lacisalsi AJ5]
gi|448700420|ref|ZP_21699528.1| dihydroorotate dehydrogenase 2 [Halobiforma lacisalsi AJ5]
gi|445779960|gb|EMA30875.1| dihydroorotate dehydrogenase 2 [Halobiforma lacisalsi AJ5]
Length = 358
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 119 ADVVLDSVKGIL-KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
AD ++ + + + A Y VVNVS PNT + + L+ + +T+ N V
Sbjct: 155 ADEAIEDYRRVFDRLSPFADYVVVNVSCPNTPEEFDESSPEHLERIFETLA-AENDADV- 212
Query: 178 PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLS 237
PILVKI PD + ++ D+V + VDG++ +NT+ R E L++ +EE GGLS
Sbjct: 213 ---PILVKIGPDSPEESILELVDIV--RELGVDGIVATNTSTTR-EGLESPEREEWGGLS 266
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G+P+ ++ST +I + + T G+LPI+GVGGV S + A+EKI+AGASLVQ+YT F+Y GP
Sbjct: 267 GKPIADRSTAVIRAIAEHTDGELPIVGVGGVDSAESAYEKIRAGASLVQLYTGFIYGGPS 326
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVGA 324
RI L LLQ++G++SV AVGA
Sbjct: 327 TAKRINRGLAALLQRDGFSSVEDAVGA 353
>gi|374600440|ref|ZP_09673442.1| Dihydroorotate dehydrogenase [Myroides odoratus DSM 2801]
gi|423325961|ref|ZP_17303801.1| dihydroorotate dehydrogenase [Myroides odoratimimus CIP 103059]
gi|373911910|gb|EHQ43759.1| Dihydroorotate dehydrogenase [Myroides odoratus DSM 2801]
gi|404604629|gb|EKB04246.1| dihydroorotate dehydrogenase [Myroides odoratimimus CIP 103059]
Length = 340
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 113/172 (65%), Gaps = 7/172 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
YFVVNVSSPNT NLR LQ K+ L LL + N KP PIL+KIAPDL+ +
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLNALQAKNNG---KPKSKPILLKIAPDLTDSQLL 228
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
DI D+V ++ K+ G+I +NTT+ R E L + K ETGGLSG+PL +STE+I + +
Sbjct: 229 DIIDIV--AETKIAGVIATNTTISR-EGLQSEKKVETGGLSGKPLTQRSTEVIRFLADKS 285
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
PIIGVGG+ S DA EK++AGASL+Q+YT F+Y GP L+ I ++ E
Sbjct: 286 NRAFPIIGVGGIHSPADAIEKLEAGASLIQLYTGFIYEGPALIKAINKKILE 337
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
YFVVNVSSPNT NLR LQ K+ L LL + N KP PIL+KIAPDL+ +
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLNALQAKNNG---KPKSKPILLKIAPDLTDSQLL 228
Query: 117 DIADVVLDS-VKGIL 130
DI D+V ++ + G++
Sbjct: 229 DIIDIVAETKIAGVI 243
>gi|365864402|ref|ZP_09404089.1| dihydroorotate dehydrogenase 2 [Streptomyces sp. W007]
gi|364006198|gb|EHM27251.1| dihydroorotate dehydrogenase 2 [Streptomyces sp. W007]
Length = 370
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 125/210 (59%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ D VK A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 156 AEAAADYVKSTEALAGHADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE----TG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L R E TG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-ESLGLRSDPELVGETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++S +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y
Sbjct: 273 GLSGAPLKERSLEVLSRLYARVGDRITLVGVGGVENAEDAWQRILAGATLVQGYSAFIYE 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP I L L Y ++++AVGA
Sbjct: 333 GPFYARAIHKGLAARLATSPYATLAEAVGA 362
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|148555828|ref|YP_001263410.1| dihydroorotate dehydrogenase 2 [Sphingomonas wittichii RW1]
gi|148501018|gb|ABQ69272.1| dihydroorotate oxidase A [Sphingomonas wittichii RW1]
Length = 356
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 7/214 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD AD + D G+ VA Y VN+SSPNT LR LQ + L LL V
Sbjct: 148 VNIGANKDAADRIADYANGVRVMAGVARYLTVNISSPNTPGLRALQDRGALTALLDAVTA 207
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R P + +K+APDL + DIA++ + ++DGLIVSNTT+ R L + +
Sbjct: 208 ARPAGG----PSVFLKVAPDLEPADIDDIAEIA--AAQRLDGLIVSNTTISRPP-LRSPH 260
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PLR+ + + + + K T G +P+I GG+ S DA+ +I+AGASLVQ+Y+
Sbjct: 261 AGEGGGLSGAPLRDLAQQRLVDFRKATGGAIPLIAAGGIASAADAYARIRAGASLVQLYS 320
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
+ VY GP L RI + L ELL ++G+ ++ AVG
Sbjct: 321 ALVYEGPGLARRINAGLVELLDRDGFATIGDAVG 354
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ VA Y VN+SSPNT LR LQ + L LL V R P + +K+A
Sbjct: 166 GVRVMAGVARYLTVNISSPNTPGLRALQDRGALTALLDAVTAARPAGG----PSVFLKVA 221
Query: 108 PDLSLDEKKDIADVV 122
PDL + DIA++
Sbjct: 222 PDLEPADIDDIAEIA 236
>gi|423196624|ref|ZP_17183207.1| dihydroorotate dehydrogenase [Aeromonas hydrophila SSU]
gi|404632078|gb|EKB28707.1| dihydroorotate dehydrogenase [Aeromonas hydrophila SSU]
Length = 336
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
D +++ KD + +D V D A Y VN+SSPNT LR LQ + L LL +
Sbjct: 145 DTPIEQGKDDYLICMDKVY------DHAGYIAVNISSPNTPGLRSLQYGEALDELLAALK 198
Query: 169 ETRNQLAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ +LA K P+ VKIAPDL+ DE +A ++ K +DG+I +NTT++R D
Sbjct: 199 VRQQELAAQYKKYVPLAVKIAPDLTPDEINQVAASLI--KNGIDGVIATNTTLERDMIYD 256
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ E GGLSG PL++KSTE+I ++ K G LPIIGVGG+ S A EK+ AGASLVQ
Sbjct: 257 MPHAGEAGGLSGRPLQHKSTEVIRQLAKALNGALPIIGVGGIDSAMAAREKLAAGASLVQ 316
Query: 287 IYTSFVYHGPPLVTRIKSEL 306
IY+ F+Y GP LV I + +
Sbjct: 317 IYSGFIYKGPDLVKEIVTHI 336
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDL+ DE + A ++ + + G++
Sbjct: 215 AVKIAPDLTPDEINQVAASLIKNGIDGVI 243
>gi|345006074|ref|YP_004808927.1| dihydroorotate dehydrogenase [halophilic archaeon DL31]
gi|344321700|gb|AEN06554.1| Dihydroorotate dehydrogenase [halophilic archaeon DL31]
Length = 351
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 130/221 (58%), Gaps = 11/221 (4%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
V I ++ + +AD D + D YFVVNVSSPNT LR LQ +D L+ +
Sbjct: 140 VPIGVNIGKSKATPLADAPADYRYTYERTADAGDYFVVNVSSPNTPGLRSLQNRDALEAI 199
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
+ + + + P+LVK++PDLS ++ VV D ++DG+IV+NTT +R E
Sbjct: 200 IGELQDAGAE-------PLLVKLSPDLSGPAIEESLAVVDD--MELDGVIVTNTTTERPE 250
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
L A + E GGLSG P+ ++T L+ + + T +P++GVGG+ + A+ KI+AGAS
Sbjct: 251 SLTAPEQAERGGLSGAPIEERATGLVQFVAERTD--VPVVGVGGISDAEGAYRKIRAGAS 308
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+VQ+YT VY GP L I L +LL ++G++SV AVGA
Sbjct: 309 VVQLYTGLVYEGPSLARDINQGLLDLLDRDGFDSVEDAVGA 349
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ D YFVVNVSSPNT LR LQ +D L+ ++ + + + P+LVK++PDL
Sbjct: 167 RTADAGDYFVVNVSSPNTPGLRSLQNRDALEAIIGELQDAGAE-------PLLVKLSPDL 219
Query: 111 S 111
S
Sbjct: 220 S 220
>gi|429081937|ref|ZP_19145032.1| Dihydroorotate dehydrogenase [Cronobacter condimenti 1330]
gi|426549503|emb|CCJ71073.1| Dihydroorotate dehydrogenase [Cronobacter condimenti 1330]
Length = 336
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ + L LL + + LA K P+ VKIAPDLS+D
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGEALDDLLAAIKNQQQILAQKHHKYVPVAVKIAPDLSVD 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR ++ +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHHIDGVIATNTTLDRSLVQGMKHCDETGGLSGRPLQLKSTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ KG+LPIIGVGG+ S A EK+ AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELKGRLPIIGVGGIDSVIAAREKMAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ + L LL + + LA K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGEALDDLLAAIKNQQQILAQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS+DE +AD +V + G++
Sbjct: 215 AVKIAPDLSVDELIQVADSLVRHHIDGVI 243
>gi|222478458|ref|YP_002564695.1| dihydroorotate dehydrogenase 2 [Halorubrum lacusprofundi ATCC
49239]
gi|222451360|gb|ACM55625.1| dihydroorotate dehydrogenase [Halorubrum lacusprofundi ATCC 49239]
Length = 360
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 134/232 (57%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L +PLP I V I ++ + +A+ D + + D YFVVNVSSPNT LR
Sbjct: 140 RLDREPLPEIPVGI--NIGKSKSTPLAEAPEDYLYTYERVADAGDYFVVNVSSPNTPGLR 197
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ + L+ +L T+ + P+LVK++PDL +D VV D +DG+
Sbjct: 198 ELQNRAALEEILGTLTDAGAD-------PLLVKLSPDLPEPAVEDALGVVDD--LGLDGV 248
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R L + + E GGLSG+P+ +TE + + + T +P+IGVGG+ K
Sbjct: 249 IATNTTTSRPNSLKSPQQAERGGLSGKPIEPIATERVRFVAERTD--VPVIGVGGISDAK 306
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASL+Q+YT VY GP L I + +LL ++G++SV AVGA
Sbjct: 307 GAYEKIRAGASLIQLYTGLVYEGPGLARDINGGVLDLLDRDGFDSVEAAVGA 358
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 39 AWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP 98
A + +L + D YFVVNVSSPNT LR+LQ + L+ +L T+ +
Sbjct: 164 AEAPEDYLYTYERVADAGDYFVVNVSSPNTPGLRELQNRAALEEILGTLTDAGAD----- 218
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLD 124
P+LVK++PDL +D VV D
Sbjct: 219 --PLLVKLSPDLPEPAVEDALGVVDD 242
>gi|332185390|ref|ZP_08387138.1| dihydroorotate oxidase [Sphingomonas sp. S17]
gi|332014368|gb|EGI56425.1| dihydroorotate oxidase [Sphingomonas sp. S17]
Length = 342
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 9/215 (4%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D G+ + +A Y +N+SSPNT LR LQ L LL E
Sbjct: 137 INVGANKDAGDRIADYRHGVTRAAPIADYVTINISSPNTPGLRDLQHGPALAELLAASRE 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ P+ +K+APDL + +IA +D + +D +I+ NTT+ R A
Sbjct: 197 AAGTV------PLFLKVAPDLEPSQIDEIARAAIDHR--LDAIIIGNTTITRPGVTSAN- 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
ETGGLSG PL + +++ K T +P+I GG+ SG +A+ +I+AGASLVQ+Y+
Sbjct: 248 AAETGGLSGRPLAPLARARLADFRKATGAAIPLIAAGGIDSGAEAYARIRAGASLVQLYS 307
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP L RI ++L+ LL ++G+ +AVGA
Sbjct: 308 ALVYEGPGLAGRILTDLDALLARDGFAHAGEAVGA 342
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 48 GILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIA 107
G+ + +A Y +N+SSPNT LR LQ L LL E + P+ +K+A
Sbjct: 155 GVTRAAPIADYVTINISSPNTPGLRDLQHGPALAELLAASREAAGTV------PLFLKVA 208
Query: 108 PDLSLDEKKDIADVVLD 124
PDL + +IA +D
Sbjct: 209 PDLEPSQIDEIARAAID 225
>gi|441499201|ref|ZP_20981388.1| Dihydroorotate dehydrogenase [Fulvivirga imtechensis AK7]
gi|441437067|gb|ELR70424.1| Dihydroorotate dehydrogenase [Fulvivirga imtechensis AK7]
Length = 292
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSL 192
+V YFVVNVSSPNT NLR LQ K+ L LL +++ A K P PIL+KIAPDL+
Sbjct: 116 EVVDYFVVNVSSPNTPNLRALQDKEPLTQLLGGLMKLN---AEKKTPKPILLKIAPDLTD 172
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE---TGGLSGEPLRNKSTELI 249
D+ DI D+V + +DGLI +NTT+ R ++ + GGLSG PLR +STE++
Sbjct: 173 DQLNDIVDIV--KEVNLDGLIATNTTISRDGLKTPEHEVQKIGAGGLSGLPLRARSTEVL 230
Query: 250 SEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ PII VGG+ S +DA EKI+AGASLVQ+YT F+Y GP L+ +I L
Sbjct: 231 KFLRNKLGPDFPIISVGGIMSAEDALEKIRAGASLVQVYTGFIYEGPSLIKKINKAL 287
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSL 112
+V YFVVNVSSPNT NLR LQ K+ L LL +++ A K P PIL+KIAPDL+
Sbjct: 116 EVVDYFVVNVSSPNTPNLRALQDKEPLTQLLGGLMKLN---AEKKTPKPILLKIAPDLTD 172
Query: 113 DEKKDIADVV 122
D+ DI D+V
Sbjct: 173 DQLNDIVDIV 182
>gi|429103846|ref|ZP_19165820.1| Dihydroorotate dehydrogenase [Cronobacter turicensis 564]
gi|426290495|emb|CCJ91933.1| Dihydroorotate dehydrogenase [Cronobacter turicensis 564]
Length = 336
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + L+ K P+ VKIAPDLS++
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQVLSQKHHKYVPVAVKIAPDLSVE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLN 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EK+ AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKMAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQVLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS++E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSVEELIQVADSLVRHNIDGVI 243
>gi|311745585|ref|ZP_07719370.1| dihydroorotate oxidase [Algoriphagus sp. PR1]
gi|126578147|gb|EAZ82367.1| dihydroorotate oxidase [Algoriphagus sp. PR1]
Length = 346
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 116/173 (67%), Gaps = 9/173 (5%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP-PILVKIAPDLSLDEKK 196
YFVVNVSSPNT NLR LQ K+ L LL V + +Q K P PIL+KIAPDL+ +
Sbjct: 173 YFVVNVSSPNTPNLRDLQEKEPLTKLLLAVKKANDQ---KENPKPILLKIAPDLTNGQLD 229
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGLSGEPLRNKSTELISEMY 253
DI D+VL++K +DG+I +NTT+DR + + E GG+SG+ L +STE+I +
Sbjct: 230 DIVDIVLETK--IDGVIATNTTIDRSQLSTPVSQVEAIGAGGVSGKVLGKRSTEVIRYLS 287
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + PIIGVGG+FS +DA EK++AGASLVQ+Y+ +Y GP L+ +IK L
Sbjct: 288 EKSNKSFPIIGVGGIFSAEDAIEKLEAGASLVQVYSGMIYEGPGLIKKIKKGL 340
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP-PILVKIAPDLSLDEKK 116
YFVVNVSSPNT NLR LQ K+ L LL V + +Q K P PIL+KIAPDL+ +
Sbjct: 173 YFVVNVSSPNTPNLRDLQEKEPLTKLLLAVKKANDQ---KENPKPILLKIAPDLTNGQLD 229
Query: 117 DIADVVLDS-VKGIL 130
DI D+VL++ + G++
Sbjct: 230 DIVDIVLETKIDGVI 244
>gi|90420417|ref|ZP_01228324.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
gi|90335145|gb|EAS48898.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
Length = 365
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 5/214 (2%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D V D V+GI F VA Y +N+SSPNT LR LQ+ +L LL++ V
Sbjct: 138 VNVGANKDAIDRVADYVEGINVFAPVASYLTINISSPNTPGLRALQSGSELDRLLRSAVA 197
Query: 170 TRNQLAV---KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
R+ A P+ +K+APDL+ ++ ++IA V ++ +DG+IVSNTT+ R
Sbjct: 198 ARDGYAALSGTAKTPLFLKVAPDLTEEQIEEIAGQV--TRRGIDGMIVSNTTLSRAGVTG 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
E GGLSG PL ++T +++ K +P+IGVGG+ S +A +I+AGA L+Q
Sbjct: 256 LPDATEAGGLSGAPLAARATYVLARFRKALGPDMPLIGVGGIDSAAEAIRRIEAGADLLQ 315
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQ 320
+YT+ VYHGP L I + L + G +S+ +
Sbjct: 316 LYTALVYHGPELPGAILRGILRYLDRAGIDSLRE 349
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN---QLALKPLPP 101
++ GI F VA Y +N+SSPNT LR LQ+ +L LL++ V R+ L+ P
Sbjct: 153 YVEGINVFAPVASYLTINISSPNTPGLRALQSGSELDRLLRSAVAARDGYAALSGTAKTP 212
Query: 102 ILVKIAPDLSLDEKKDIADVV 122
+ +K+APDL+ ++ ++IA V
Sbjct: 213 LFLKVAPDLTEEQIEEIAGQV 233
>gi|153875994|ref|ZP_02003538.1| Dihydroorotate dehydrogenase [Beggiatoa sp. PS]
gi|152067542|gb|EDN66462.1| Dihydroorotate dehydrogenase [Beggiatoa sp. PS]
Length = 262
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPP 181
D + G+ K A Y VN+SSPNT LR+LQ D+L++LL ++ + + QLA K P
Sbjct: 78 DYLIGLHKVYPYADYVAVNISSPNTPGLRQLQQGDELENLLSSLKQAQQQLATQHKKYVP 137
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
++VKIAPDLS + ++A+ +L + +DG+I +NTT+ R + Y +ETGGLSG PL
Sbjct: 138 LVVKIAPDLSDNALSELAEKLLAHQ--IDGVIATNTTLSRTGVENLPYADETGGLSGAPL 195
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
++T+++ + +GK+PII GGV + DA EK++AGASLVQIYT +Y GP LV
Sbjct: 196 TKRATQIVQHLNHTLQGKIPIIATGGVMNVADAKEKLEAGASLVQIYTGLIYKGPYLVKE 255
Query: 302 I 302
I
Sbjct: 256 I 256
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPI 102
+L+G+ K A Y VN+SSPNT LR+LQ D+L++LL ++ + + QLA K P+
Sbjct: 79 YLIGLHKVYPYADYVAVNISSPNTPGLRQLQQGDELENLLSSLKQAQQQLATQHKKYVPL 138
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+VKIAPDLS + ++A+ +L
Sbjct: 139 VVKIAPDLSDNALSELAEKLL 159
>gi|330829659|ref|YP_004392611.1| dihydroorotate dehydrogenase 2 [Aeromonas veronii B565]
gi|423209648|ref|ZP_17196202.1| dihydroorotate dehydrogenase [Aeromonas veronii AER397]
gi|328804795|gb|AEB49994.1| dihydroorotate dehydrogenase 2 [Aeromonas veronii B565]
gi|404617506|gb|EKB14442.1| dihydroorotate dehydrogenase [Aeromonas veronii AER397]
Length = 336
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 130/227 (57%), Gaps = 14/227 (6%)
Query: 82 HLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVV 141
HL+ V E + Q + I + D +++ KD + +D V D A Y V
Sbjct: 122 HLVAKVKEAKYQGVIG----INIGKNKDTPIEQGKDDYLICMDKVY------DHAGYIAV 171
Query: 142 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLDEKKDIA 199
N+SSPNT LR LQ + L LL + + +LA K P+ VKIAPDLSL+E +A
Sbjct: 172 NISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPLAVKIAPDLSLEEIDQVA 231
Query: 200 DVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGK 259
++ + +DG+I +NTT++R D + E GGLSG PL++KSTE+I + K G
Sbjct: 232 ASLV--RNGIDGVIATNTTLEREMIYDMPHAGEAGGLSGRPLQHKSTEVIRHLAKALNGV 289
Query: 260 LPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
LPIIGVGG+ S A EK+ AGASLVQIY+ F+Y GP LV I + +
Sbjct: 290 LPIIGVGGIDSAMAAREKLAAGASLVQIYSGFIYKGPGLVKEIVTNI 336
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDLSL+E + A +V + + G++
Sbjct: 215 AVKIAPDLSLEEIDQVAASLVRNGIDGVI 243
>gi|304321014|ref|YP_003854657.1| dihydroorotate dehydrogenase [Parvularcula bermudensis HTCC2503]
gi|303299916|gb|ADM09515.1| dihydroorotate dehydrogenase [Parvularcula bermudensis HTCC2503]
Length = 344
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 124/218 (56%), Gaps = 9/218 (4%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
++L KD AD + D G + + VNVSSPNT LR LQ D L++LL ++
Sbjct: 136 VNLGANKDSADRLKDFAVGAAALSPLVDFCTVNVSSPNTPGLRHLQEADTLRNLLSSLPS 195
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+ P + +K+APDL+ + D+A++V VD LIVSNTT+ R
Sbjct: 196 V-----MAPSTRLFLKVAPDLTDEAVADLAELV--RSTPVDALIVSNTTISRPHL--TSD 246
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
EETGGLSG PL + ST + + L G +P+IGVGG+ A++KI GAS +Q+YT
Sbjct: 247 PEETGGLSGRPLFDLSTRRLRDFASLLNGDVPLIGVGGIEDSDTAYQKILNGASALQLYT 306
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
+ +Y GP LV I L + L +GY +V+ AVGAAH+
Sbjct: 307 ALIYKGPRLVVDILDGLADRLTVDGYPTVADAVGAAHR 344
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPP 101
L+ + +G + + VNVSSPNT LR LQ D L++LL ++ + P
Sbjct: 148 LKDFAVGAAALSPLVDFCTVNVSSPNTPGLRHLQEADTLRNLLSSLPSV-----MAPSTR 202
Query: 102 ILVKIAPDLSLDEKKDIADVV 122
+ +K+APDL+ + D+A++V
Sbjct: 203 LFLKVAPDLTDEAVADLAELV 223
>gi|384134750|ref|YP_005517464.1| dihydroorotate dehydrogenase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339288835|gb|AEJ42945.1| dihydroorotate dehydrogenase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 357
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 130/217 (59%), Gaps = 8/217 (3%)
Query: 110 LSLDEKKDIADVVL--DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + + D + + A Y +NVSSPNT LR+LQ++ + LL +
Sbjct: 141 INIGKNKDTPNAIAHEDYRAALEQVAPFADYLTINVSSPNTPGLRELQSEAFILDLLHAI 200
Query: 168 VETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVD-GLIVSNTTVDRYEYLD 226
R+Q + I VK+APDL DE + I D + S + GLI +NTTV R L
Sbjct: 201 EPIRSQYRLS----IWVKLAPDLPNDEIERIVDALATSPFREHLGLICTNTTVQRPP-LS 255
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
++E GGLSG PL +STE++ + + ++PI+G GGVF+ +DA+EKI+ GASLVQ
Sbjct: 256 GPNRDEAGGLSGRPLAARSTEVVRIAARAAQRRVPIMGSGGVFTAEDAYEKIRNGASLVQ 315
Query: 287 IYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
IYT+ +Y GP +V + L+ LL ++G+ S++ AVG
Sbjct: 316 IYTALIYRGPAVVGELVRGLDALLARDGFASIADAVG 352
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y +NVSSPNT LR+LQ++ + LL + R+Q L I VK+APDL DE
Sbjct: 169 ADYLTINVSSPNTPGLRELQSEAFILDLLHAIEPIRSQYRLS----IWVKLAPDLPNDEI 224
Query: 116 KDIADVVLDS 125
+ I D + S
Sbjct: 225 ERIVDALATS 234
>gi|261211620|ref|ZP_05925907.1| dihydroorotate dehydrogenase [Vibrio sp. RC341]
gi|260838970|gb|EEX65602.1| dihydroorotate dehydrogenase [Vibrio sp. RC341]
Length = 336
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 110/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL + +++LA K P+ +KIAPDLS D
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQSELAAKHDKYVPLTLKIAPDLSDD 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E K I +L K K+DG+I +NTT+DR +Y EETGGLSG PL+ +STE+I +Y
Sbjct: 226 EIKQICQSLL--KNKIDGVIATNTTLDRSLVEGMKYAEETGGLSGRPLQTRSTEVIKCLY 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
K ++PIIGVGG+ S A EK+ AGA LVQ+Y+ F+Y GP LV I L
Sbjct: 284 KELGEEIPIIGVGGIDSYISAKEKLMAGAKLVQVYSGFIYQGPRLVADIVKNL 336
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + +++LA K P+
Sbjct: 155 YLICMDKVYPYAGYIAVNISSPNTPGLRSLQYGEALDELLAALKTRQSELAAKHDKYVPL 214
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+KIAPDLS DE K I +L + + G++
Sbjct: 215 TLKIAPDLSDDEIKQICQSLLKNKIDGVI 243
>gi|120611126|ref|YP_970804.1| dihydroorotate dehydrogenase 2 [Acidovorax citrulli AAC00-1]
gi|166234195|sp|A1TPZ2.1|PYRD_ACIAC RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|120589590|gb|ABM33030.1| dihydroorotate oxidase A [Acidovorax citrulli AAC00-1]
Length = 359
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 88 VETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLD---SVKGILKFGDVAHYFVVNVS 144
V N A + P+L+ + ++ + I D D ++G+ D Y VN+S
Sbjct: 130 VRQSNHHARPGMRPMLLGL--NIGKNATTPIEDATRDYLLCLEGVYPHAD---YVTVNIS 184
Query: 145 SPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--------PILVKIAPDLSLDEKK 196
SPNT NLR LQ+ L LL + E R LA +P PI VKIAPDL+ ++
Sbjct: 185 SPNTQNLRALQSDAALDGLLGAIAERRESLARQPEKATGRPRRVPIFVKIAPDLAEEQVA 244
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
IA + + +DG+I +NTT+ R R+ EETGGLSG P+R S +I ++
Sbjct: 245 VIASTL--QRHGMDGVIATNTTISRDAVQGLRHAEETGGLSGAPVREASNRVIRQLRHAL 302
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
PIIGVGG+ S +DA EKI+AGA +VQIYT +Y GP LV ++ L +
Sbjct: 303 GKDFPIIGVGGILSAEDAVEKIRAGADVVQIYTGLIYRGPALVPQVAKALRAM 355
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--------PILVKIA 107
A Y VN+SSPNT NLR LQ+ L LL + E R LA +P PI VKIA
Sbjct: 176 ADYVTVNISSPNTQNLRALQSDAALDGLLGAIAERRESLARQPEKATGRPRRVPIFVKIA 235
Query: 108 PDLSLDEKKDIADVV 122
PDL+ ++ IA +
Sbjct: 236 PDLAEEQVAVIASTL 250
>gi|34497267|ref|NP_901482.1| dihydroorotate dehydrogenase 2 [Chromobacterium violaceum ATCC
12472]
gi|73913675|sp|Q7NX17.1|PYRD_CHRVO RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|34103123|gb|AAQ59486.1| dihydroorotate oxidase [Chromobacterium violaceum ATCC 12472]
Length = 344
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 4/179 (2%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSL 192
A Y VN+SSPNT NLR+LQ D+L LL + + + LA + P+ VKIAPDL
Sbjct: 165 AASYVTVNISSPNTKNLRQLQQGDELGRLLAALKQRQLALADQHGRYVPLAVKIAPDLDD 224
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
++ +IA ++ + +DG+I +NTT+ R E + E GGLSG P+R +STE+I ++
Sbjct: 225 EQIAEIARLL--TGNGIDGVIATNTTLSRREVAGHPLESEAGGLSGAPVRARSTEVIRKL 282
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
+K G +PIIGVGG+ SG DA EK+ AGASLVQ+Y+ +Y GP LV + LQ
Sbjct: 283 HKELGGAMPIIGVGGILSGNDAVEKLDAGASLVQLYSGLIYRGPELVGECARATAQYLQ 341
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 28/144 (19%)
Query: 2 VGLDESTCSRILSRVFRS----------GEWGCTPTHNMLSSFARMRAWVLQFWLLGILK 51
+G + + +L V RS G+ TP N + + A + Q +
Sbjct: 113 MGFNNHGVAALLDNVRRSKFKGVLGINIGKNAITPIENAVDDYL---ACLDQVYA----- 164
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP----LPPILVKIA 107
A Y VN+SSPNT NLR+LQ D+L LL + + QLAL P+ VKIA
Sbjct: 165 ---AASYVTVNISSPNTKNLRQLQQGDELGRLLAAL--KQRQLALADQHGRYVPLAVKIA 219
Query: 108 PDLSLDEKKDIADVVL-DSVKGIL 130
PDL ++ +IA ++ + + G++
Sbjct: 220 PDLDDEQIAEIARLLTGNGIDGVI 243
>gi|411009350|ref|ZP_11385679.1| dihydroorotate dehydrogenase 2 [Aeromonas aquariorum AAK1]
Length = 336
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
D +++ KD + +D V D A Y VN+SSPNT LR LQ + L LL +
Sbjct: 145 DTPIEQGKDDYLICMDKVY------DHAGYIAVNISSPNTPGLRSLQYGEALDELLAALK 198
Query: 169 ETRNQLAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ +LA K P+ VKIAPDL+ DE +A ++ K +DG+I +NTT++R D
Sbjct: 199 VRQQELAAQYKKYVPLAVKIAPDLTPDEINQVAASLI--KNGIDGVIATNTTLERDMIYD 256
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
+ E GGLSG PL++KSTE+I ++ K G LPIIGVGG+ S A EK+ AGASLVQ
Sbjct: 257 MPHAGEAGGLSGRPLQHKSTEVIRQLAKALDGALPIIGVGGIDSAMAAREKLAAGASLVQ 316
Query: 287 IYTSFVYHGPPLVTRIKSEL 306
IY+ F+Y GP LV I + +
Sbjct: 317 IYSGFIYKGPDLVKEIVTHI 336
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDELLAALKVRQQELAAQYKKYVPL 214
Query: 103 LVKIAPDLSLDEKKDI-ADVVLDSVKGIL 130
VKIAPDL+ DE + A ++ + + G++
Sbjct: 215 AVKIAPDLTPDEINQVAASLIKNGIDGVI 243
>gi|187929008|ref|YP_001899495.1| dihydroorotate dehydrogenase 2 [Ralstonia pickettii 12J]
gi|187725898|gb|ACD27063.1| Dihydroorotate oxidase [Ralstonia pickettii 12J]
Length = 365
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 193 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 252
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++AD +L + K+DG+I +NTT+ R + EE GGLSG+P+R ST +I ++
Sbjct: 253 QIANVADALL--RHKMDGVIATNTTISREAVAGLAHAEEAGGLSGQPVREGSTRVIRALH 310
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 311 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 363
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 193 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 252
Query: 114 EKKDIADVVL 123
+ ++AD +L
Sbjct: 253 QIANVADALL 262
>gi|398344034|ref|ZP_10528737.1| dihydroorotate dehydrogenase 2 [Leptospira inadai serovar Lyme str.
10]
Length = 368
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPP 181
V D + I K A Y V+NVSSPNT LR Q ++ L +L+ + RN L + P
Sbjct: 168 VEDYLYSIQKLSSFADYLVINVSSPNTPGLRNFQKQENLFNLMNGI---RNGLGGEFPSP 224
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
VK APDL + ++I + V D ++ G+I++NTT+D+ E GG+SG PL
Sbjct: 225 TFVKFAPDLEERDFEEIMESVPD--LRISGVILTNTTIDKSVIKKFPNVELEGGVSGAPL 282
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R +ST + Y+ +GK+PIIGVGGV SG+ A EKI AGA L+Q+YT ++Y GP L R
Sbjct: 283 RARSTRFVRLAYQKLRGKIPIIGVGGVDSGEAALEKILAGADLIQVYTGYIYQGPLLPRR 342
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
I L++ ++K G S+S+ VG
Sbjct: 343 ILEYLDKTVKKFGAKSISEIVG 364
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L I K A Y V+NVSSPNT LR Q ++ L +L+ + RN L + P V
Sbjct: 171 YLYSIQKLSSFADYLVINVSSPNTPGLRNFQKQENLFNLMNGI---RNGLGGEFPSPTFV 227
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K APDL + ++I + V D
Sbjct: 228 KFAPDLEERDFEEIMESVPD 247
>gi|448434187|ref|ZP_21586114.1| dihydroorotate dehydrogenase 2 [Halorubrum tebenquichense DSM
14210]
gi|445685710|gb|ELZ38059.1| dihydroorotate dehydrogenase 2 [Halorubrum tebenquichense DSM
14210]
Length = 351
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 131/232 (56%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L PLP + V I ++ + +A+ D + D YFVVNVSSPNT LR
Sbjct: 131 RLDRDPLPDVPVGI--NIGKSKSTPLAEAPDDYRYTYERVADAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ ++ L+ +L T+ + P+LVK++PDL D VV D +DG+
Sbjct: 189 ELQNREALERILGTLDDAGAD-------PLLVKLSPDLPEPAVADALAVVDD--LDLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R + L + E GGLSG+P+ + +TE + + + T +P+IGVGGV
Sbjct: 240 IATNTTTSRPDSLRGHNRAERGGLSGKPIESLATERVRFVAERTD--VPVIGVGGVSDAA 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLVQ YT VY GP L I L ELL ++G++SV AVGA
Sbjct: 298 GAYEKIRAGASLVQAYTGLVYEGPGLARDINEGLLELLDRDGFDSVEDAVGA 349
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ D YFVVNVSSPNT LR+LQ ++ L+ +L T+ + P+LVK++PDL
Sbjct: 167 RVADAGDYFVVNVSSPNTPGLRELQNREALERILGTLDDAGAD-------PLLVKLSPDL 219
Query: 111 SLDEKKDIADVVLD 124
D VV D
Sbjct: 220 PEPAVADALAVVDD 233
>gi|442611069|ref|ZP_21025775.1| Dihydroorotate dehydrogenase [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441746997|emb|CCQ11837.1| Dihydroorotate dehydrogenase [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 336
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 119/181 (65%), Gaps = 4/181 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D + + K + A Y VN+SSPNT LR LQ + L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGNALDDLLESLKAEQMDLTSKHHKNVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPD+ + + IA+ ++ K ++DG+I +NTT++R ++ +E GGLSG P+
Sbjct: 214 MLVKIAPDVDAIQIEQIAESLV--KNRIDGVIATNTTLERESVKGLKFADEAGGLSGHPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R+KST ++SE+ ++TKG LPIIGVGG+ + A EK+ +GASLVQ+YT F+Y GP LV +
Sbjct: 272 RSKSTHVVSELKRITKGNLPIIGVGGIDDAQSAKEKLVSGASLVQVYTGFIYRGPQLVKQ 331
Query: 302 I 302
I
Sbjct: 332 I 332
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ + L LL+++ + L K P+LVKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGNALDDLLESLKAEQMDLTSKHHKNVPMLVKIAPDVDAI 225
Query: 114 EKKDIADVVL----------------DSVKGILKFGDVA 136
+ + IA+ ++ +SVKG LKF D A
Sbjct: 226 QIEQIAESLVKNRIDGVIATNTTLERESVKG-LKFADEA 263
>gi|403415325|emb|CCM02025.1| predicted protein [Fibroporia radiculosa]
Length = 598
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP----- 178
D V GI FG A VVN+SSPNT LR LQ+ L+ LL V +++A
Sbjct: 231 DFVSGIRAFGSYADVLVVNISSPNTPGLRALQSHALLEDLLGRVTHALDEIATSESNKSR 290
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSG 238
P +++KIAPDL + DIA +L + VDG+IVSNTTV R L K E GGLSG
Sbjct: 291 RPKLVLKIAPDLDEAQVDDIAKAIL--QKSVDGVIVSNTTVRRPSTLTDANKAEAGGLSG 348
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
PL+ S + + +PIIG GG+ SG DA E KAGA+ VQIYTSF Y G
Sbjct: 349 PPLKPYSLATLRMLRARLPAAVPIIGCGGISSGADALEYAKAGATAVQIYTSFGYDGVGT 408
Query: 299 VTRIKSELEELLQKEG 314
RIK EL E L +EG
Sbjct: 409 CRRIKDELAEALSREG 424
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-----L 99
++ GI FG A VVN+SSPNT LR LQ+ L+ LL V +++A
Sbjct: 232 FVSGIRAFGSYADVLVVNISSPNTPGLRALQSHALLEDLLGRVTHALDEIATSESNKSRR 291
Query: 100 PPILVKIAPDLSLDEKKDIADVVLD-SVKGIL 130
P +++KIAPDL + DIA +L SV G++
Sbjct: 292 PKLVLKIAPDLDEAQVDDIAKAILQKSVDGVI 323
>gi|261855648|ref|YP_003262931.1| dihydroorotate dehydrogenase [Halothiobacillus neapolitanus c2]
gi|261836117|gb|ACX95884.1| dihydroorotate dehydrogenase [Halothiobacillus neapolitanus c2]
Length = 377
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPP 181
D + G+ + A Y +N+SSPNT NLR+LQA DQ LL + + +++L + P
Sbjct: 186 DYLIGLREVHRFADYVTINISSPNTKNLRQLQASDQFGPLLAALKKQKDELDRQNERQVP 245
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
I+VKIAPDLS +E + +A ++LD +DG+I +NTT+DR + +E GGLSG P+
Sbjct: 246 IVVKIAPDLSGEEIESMARLLLDEG--MDGVIATNTTIDRAMVSGLPHADEAGGLSGRPV 303
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R STE+I + PIIGVGG+ S A EKI+AGA L+Q+YT F+Y GP L+
Sbjct: 304 RKASTEVIRHLRATLPADFPIIGVGGIDSAAAALEKIEAGADLLQLYTGFIYRGPGLIRE 363
Query: 302 IKSEL 306
I L
Sbjct: 364 IAQAL 368
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-- 98
L +L+G+ + A Y +N+SSPNT NLR+LQA DQ LL + + +++L +
Sbjct: 183 ALDDYLIGLREVHRFADYVTINISSPNTKNLRQLQASDQFGPLLAALKKQKDELDRQNER 242
Query: 99 LPPILVKIAPDLSLDEKKDIADVVLD 124
PI+VKIAPDLS +E + +A ++LD
Sbjct: 243 QVPIVVKIAPDLSGEEIESMARLLLD 268
>gi|448364888|ref|ZP_21553464.1| dihydroorotate dehydrogenase 2 [Natrialba aegyptia DSM 13077]
gi|445657521|gb|ELZ10348.1| dihydroorotate dehydrogenase 2 [Natrialba aegyptia DSM 13077]
Length = 358
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 147/286 (51%), Gaps = 27/286 (9%)
Query: 47 LGILKFGDVAHYFVVNVSSPNTANLRKLQA-------KDQLKHLLKTVVETRNQLALKPL 99
G ++ G V Y P LR+ +A Q +K+ +ET P
Sbjct: 85 FGFVEIGTVTPYSQGGNDRPRLFRLREDEAMVNRMGFNGQGMERVKSRLETDG----TPD 140
Query: 100 PPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAK 157
P+ V I S E++ + D V D + A Y VVNVS PNT + +
Sbjct: 141 FPLGVNIGKMNSSTEREAVEDYRRVFD------RLSPFADYVVVNVSCPNTPDEFDEASP 194
Query: 158 DQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNT 217
D L+ + +T+ E N V PILVK+ PD ++ D+V +DG++ +NT
Sbjct: 195 DHLREIFETL-EDENDADV----PILVKVGPDEPAASILELVDIV--QAFDLDGIVATNT 247
Query: 218 TVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
+ DR E L + +EE GGLSG+PL ST +I + T G LPIIGVGGV S A+ K
Sbjct: 248 STDR-ENLASPRREEWGGLSGKPLEEPSTAVIRTIADHTDGDLPIIGVGGVDSAASAYRK 306
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
I+AGASLVQ+YT FVY GP RI L LL+++G+ SV++AVG
Sbjct: 307 IRAGASLVQLYTGFVYRGPSTAKRINRGLVNLLERDGFASVAEAVG 352
>gi|386838996|ref|YP_006244054.1| dihydroorotate dehydrogenase 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374099297|gb|AEY88181.1| dihydroorotate dehydrogenase 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451792288|gb|AGF62337.1| dihydroorotate dehydrogenase 2 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 368
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 126/210 (60%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D VK + A Y VVNVSSPNT LR LQA D L+ LL V ++
Sbjct: 156 AEAVADYVKSAERLAPYADYLVVNVSSPNTPGLRNLQAVDHLRPLLTAVRGAADRTVANR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK----EETG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R + L R +ETG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-DGLGLRSPAALVKETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++ +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++FVY
Sbjct: 273 GLSGAPLKERSLEVLRRLYARVGDRITLVGVGGVETAEDAWQRILAGATLVQGYSAFVYE 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP I L L+ Y +++ AVGA
Sbjct: 333 GPFWCRAIHKGLAARLRTSPYATLADAVGA 362
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA D L+ LL V ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQAVDHLRPLLTAVRGAADRTVANRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|333908445|ref|YP_004482031.1| dihydroorotate dehydrogenase [Marinomonas posidonica IVIA-Po-181]
gi|333478451|gb|AEF55112.1| Dihydroorotate dehydrogenase [Marinomonas posidonica IVIA-Po-181]
Length = 346
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
V I +LS AD L ++ ++ + D Y N+SSPNT LR LQ + L L
Sbjct: 137 VNIGKNLSTSVDDAAADY-LACLEAVIPYAD---YITANISSPNTPGLRSLQFGESLAEL 192
Query: 164 LKTVVETRN--QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +VE R+ Q P+ VKIAPD+S DE K +AD +++ + VDG+I +NTT+ R
Sbjct: 193 ISPLVEARDRYQDENGKRVPLAVKIAPDMSDDEIKLVADTLVEQQ--VDGIIATNTTLSR 250
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
R+ EE GGLSG P+R+ ST ++ + + K LPIIGVGG+ SG DA EK++AG
Sbjct: 251 DAVSGHRFAEEAGGLSGAPVRDASTHVVRVLAEHLKDTLPIIGVGGISSGADAVEKLQAG 310
Query: 282 ASLVQIYTSFVYHGPPLV 299
A LVQ+Y+ F+Y GP LV
Sbjct: 311 ARLVQMYSGFIYRGPELV 328
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 2 VGLDESTCSRILSRVFRS---GEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHY 58
+G + ++SR+ + G G N+ +S A L L ++ + D Y
Sbjct: 112 MGFNNKGVDHLVSRIQKHRYPGMLGVNIGKNLSTSVDDAAADYLA-CLEAVIPYAD---Y 167
Query: 59 FVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRN--QLALKPLPPILVKIAPDLSLDEKK 116
N+SSPNT LR LQ + L L+ +VE R+ Q P+ VKIAPD+S DE K
Sbjct: 168 ITANISSPNTPGLRSLQFGESLAELISPLVEARDRYQDENGKRVPLAVKIAPDMSDDEIK 227
Query: 117 DIADVVLD-SVKGIL 130
+AD +++ V GI+
Sbjct: 228 LVADTLVEQQVDGII 242
>gi|299066629|emb|CBJ37822.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum CMR15]
Length = 344
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ E + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLREAQQRLADQHKRYVPVVLKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +I D +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 232 QIANIGDALL--RHRMDGVIATNTTIRREAVAGLPHAEEAGGLSGQPVREGSTRVIRALR 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 290 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 342
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ E + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLREAQQRLADQHKRYVPVVLKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ +I D +L
Sbjct: 232 QIANIGDALL 241
>gi|383935706|ref|ZP_09989140.1| dihydroorotate dehydrogenase [Rheinheimera nanhaiensis E407-8]
gi|383703275|dbj|GAB59231.1| dihydroorotate dehydrogenase [Rheinheimera nanhaiensis E407-8]
Length = 336
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ D L LL++V + L + P+ VKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQFGDALFDLLQSVKNEQLDLQAQYDKYVPVFVKIAPDMDSV 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +A+ +L K K+DG+I +NTT+DR RY +E GGLSG P+R+KSTE++ ++
Sbjct: 226 AVQQVAETLL--KSKMDGVIATNTTLDRSLVQGQRYADEAGGLSGLPVRDKSTEVLRQLR 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
KLPIIGVGG+ + A EK+ AGA+L+Q+YT F+YHGP L+ +I + L
Sbjct: 284 LAVGAKLPIIGVGGISDAQSAQEKLAAGANLLQVYTGFIYHGPALIKQIVTSL 336
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP----LPPILVKIAPDLS 111
A Y VN+SSPNT LR LQ D L LL++V QL L+ P+ VKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQFGDALFDLLQSV--KNEQLDLQAQYDKYVPVFVKIAPDMD 223
Query: 112 LDEKKDIADVVLDS 125
+ +A+ +L S
Sbjct: 224 SVAVQQVAETLLKS 237
>gi|339017673|ref|ZP_08643823.1| dihydroorotate dehydrogenase [Acetobacter tropicalis NBRC 101654]
gi|338753219|dbj|GAA07127.1| dihydroorotate dehydrogenase [Acetobacter tropicalis NBRC 101654]
Length = 357
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 116/189 (61%), Gaps = 7/189 (3%)
Query: 137 HYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKK 196
+Y V+NVSSPNT LR LQ +LK +L + + ++ PP+LVK+APDL D
Sbjct: 175 NYIVLNVSSPNTPGLRGLQDASRLKGILDAIAQRHSER-----PPLLVKLAPDLENDAVG 229
Query: 197 DIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLT 256
I + + + GLIV+NTT+ R L + +K E+GGLSG PLR ++TE++ + +
Sbjct: 230 PIVEAAIAGGAQ--GLIVTNTTLARPSSLQSPFKAESGGLSGRPLRPRATEMLRLVAQAA 287
Query: 257 KGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYN 316
G++ ++ GG+ SG D E+I+ GA LVQ+Y++F Y GP L+ R+K E+ E+++++
Sbjct: 288 AGRMALVACGGIESGADILERIRLGADLVQVYSAFAYEGPALIARLKREMLEIMRQDNIE 347
Query: 317 SVSQAVGAA 325
+ G A
Sbjct: 348 MLDDIRGTA 356
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 57 HYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKK 116
+Y V+NVSSPNT LR LQ +LK +L + + ++ PP+LVK+APDL D
Sbjct: 175 NYIVLNVSSPNTPGLRGLQDASRLKGILDAIAQRHSE-----RPPLLVKLAPDLENDAVG 229
Query: 117 DIADVVL 123
I + +
Sbjct: 230 PIVEAAI 236
>gi|429108225|ref|ZP_19170094.1| Dihydroorotate dehydrogenase [Cronobacter malonaticus 681]
gi|426294948|emb|CCJ96207.1| Dihydroorotate dehydrogenase [Cronobacter malonaticus 681]
Length = 202
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ + L LL + + L+ K P+ VKIAPDLSL+
Sbjct: 32 AGYIAINISSPNTPGLRSLQYGEALDDLLVAIKNQQQLLSQKHHKYVPVAVKIAPDLSLE 91
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 92 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLS 149
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EK+ AGASL+QIY+ F++ GPPLV I + L
Sbjct: 150 QELQGRLPIIGVGGIDSVIAAREKMAAGASLIQIYSGFIFKGPPLVKEIVTHL 202
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ + L LL + + L+ K P+
Sbjct: 21 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGEALDDLLVAIKNQQQLLSQKHHKYVPV 80
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 81 AVKIAPDLSLEELIQVADSLVRHNIDGVI 109
>gi|294650631|ref|ZP_06727985.1| dihydroorotate oxidase [Acinetobacter haemolyticus ATCC 19194]
gi|292823422|gb|EFF82271.1| dihydroorotate oxidase [Acinetobacter haemolyticus ATCC 19194]
Length = 335
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
+ D V D + + K + A Y VN+SSPNT NLR LQ+ D L LL+T+ + + +L+ +
Sbjct: 145 VEDAVSDYLICLEKVYNYASYITVNISSPNTKNLRSLQSGDALTELLQTLKDRQLELSQQ 204
Query: 178 --PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P+++K+APDL+ ++ + IA+ +L K+DGLIV+NTT+ R + + +E GG
Sbjct: 205 YNHYVPLVLKVAPDLTTEDIQFIANQLLS--FKIDGLIVTNTTLGREGVENLAHGDEAGG 262
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG P+ KSTE + + K+ KGK+P+IGVGG+ SG++A K AGASLVQ+Y+ +Y G
Sbjct: 263 LSGAPVFAKSTECLRQFSKILKGKIPLIGVGGILSGEEAVAKQLAGASLVQVYSGLIYTG 322
Query: 296 PPLV 299
P LV
Sbjct: 323 PKLV 326
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K + A Y VN+SSPNT NLR LQ+ D L LL+T+ + + +L+ + P+
Sbjct: 152 YLICLEKVYNYASYITVNISSPNTKNLRSLQSGDALTELLQTLKDRQLELSQQYNHYVPL 211
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
++K+APDL+ ++ + IA+ +L
Sbjct: 212 VLKVAPDLTTEDIQFIANQLL 232
>gi|226953042|ref|ZP_03823506.1| dihydroorotate oxydase [Acinetobacter sp. ATCC 27244]
gi|226836192|gb|EEH68575.1| dihydroorotate oxydase [Acinetobacter sp. ATCC 27244]
Length = 338
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK 177
+ D V D + + K + A Y VN+SSPNT NLR LQ+ D L LL+T+ + + +L+ +
Sbjct: 148 VEDAVSDYLICLEKVYNYASYITVNISSPNTKNLRSLQSGDALTELLQTLKDRQLELSQQ 207
Query: 178 --PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P+++K+APDL+ ++ + IA+ +L K+DGLIV+NTT+ R + + +E GG
Sbjct: 208 YNHYVPLVLKVAPDLTTEDIQFIANQLLS--FKIDGLIVTNTTLGREGVENLAHGDEAGG 265
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG P+ KSTE + + K+ KGK+P+IGVGG+ SG++A K AGASLVQ+Y+ +Y G
Sbjct: 266 LSGAPVFAKSTECLRQFSKILKGKIPLIGVGGILSGEEAVAKQLAGASLVQVYSGLIYTG 325
Query: 296 PPLV 299
P LV
Sbjct: 326 PKLV 329
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K + A Y VN+SSPNT NLR LQ+ D L LL+T+ + + +L+ + P+
Sbjct: 155 YLICLEKVYNYASYITVNISSPNTKNLRSLQSGDALTELLQTLKDRQLELSQQYNHYVPL 214
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
++K+APDL+ ++ + IA+ +L
Sbjct: 215 VLKVAPDLTTEDIQFIANQLL 235
>gi|448734723|ref|ZP_21716944.1| dihydroorotate dehydrogenase 2 [Halococcus salifodinae DSM 8989]
gi|445799632|gb|EMA50006.1| dihydroorotate dehydrogenase 2 [Halococcus salifodinae DSM 8989]
Length = 350
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 118/189 (62%), Gaps = 11/189 (5%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDE 194
YFVVNVSSPNT LR LQ +D L+H+ T+ + P+LVK++PDL+ D
Sbjct: 169 AGEYFVVNVSSPNTPGLRDLQHRDHLEHIFGTLQDAGAD-------PLLVKLSPDLTDDA 221
Query: 195 KKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYK 254
++ VV + +DG+I +NTT +R L + + E GGLSG+PL ++T ++ + +
Sbjct: 222 VEEALAVV--DEMGLDGVIATNTTTERPASLQSPNRVEKGGLSGKPLEARATRAVAFVAE 279
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEG 314
T +P+IGVGGV S A+ K++AGASLVQ+YT VY GP + I L ELL+++G
Sbjct: 280 RTD--VPVIGVGGVSSAVGAYRKLRAGASLVQLYTGLVYQGPSIARDINRGLLELLERDG 337
Query: 315 YNSVSQAVG 323
+ SV +AVG
Sbjct: 338 FESVEEAVG 346
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDE 114
YFVVNVSSPNT LR LQ +D L+H+ T+ + P+LVK++PDL+ D
Sbjct: 169 AGEYFVVNVSSPNTPGLRDLQHRDHLEHIFGTLQDAGAD-------PLLVKLSPDLTDDA 221
Query: 115 KKDIADVV 122
++ VV
Sbjct: 222 VEEALAVV 229
>gi|313675586|ref|YP_004053582.1| dihydroorotate dehydrogenase [Marivirga tractuosa DSM 4126]
gi|312942284|gb|ADR21474.1| dihydroorotate dehydrogenase [Marivirga tractuosa DSM 4126]
Length = 345
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D K L+ YFVVNVSSPNT LR+LQ K+ L LL +++ NQ +K PIL
Sbjct: 159 DYEKCFLQLYPYVDYFVVNVSSPNTPGLRELQEKEPLMQLLNHLMDL-NQKQIK-TKPIL 216
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY---KEETGGLSGEP 240
+KIAPDL+ + DI ++V +K K+DG+I +NTT++R ++ K GGLSG+P
Sbjct: 217 LKIAPDLTNQQLDDIIEIV--AKTKIDGVIATNTTINRDGLGTSKSTIDKIGNGGLSGKP 274
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L ++TE+I +Y + PIIGVGG+ S +DA EK++AGASL+Q+Y+ F+Y GP L+
Sbjct: 275 LGKRATEVIRYLYDKSNAAFPIIGVGGIMSAEDALEKLEAGASLLQLYSGFIYEGPALIK 334
Query: 301 RI 302
+I
Sbjct: 335 QI 336
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT LR+LQ K+ L LL +++ NQ +K PIL+KIAPDL+ + D
Sbjct: 173 YFVVNVSSPNTPGLRELQEKEPLMQLLNHLMDL-NQKQIK-TKPILLKIAPDLTNQQLDD 230
Query: 118 IADVV 122
I ++V
Sbjct: 231 IIEIV 235
>gi|119945959|ref|YP_943639.1| dihydroorotate oxidase [Psychromonas ingrahamii 37]
gi|166215643|sp|A1SX25.1|PYRD_PSYIN RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|119864563|gb|ABM04040.1| dihydroorotate oxidase A [Psychromonas ingrahamii 37]
Length = 336
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ D L LL + + +L VK PI +KIAPDLS
Sbjct: 166 ADYIAVNISSPNTPGLRSLQYGDALNELLAALKIRQAELQVKYNKYVPIALKIAPDLSDQ 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E IA +L+ K+DGLI +NTT+DR + E GGLSG PL+NKST +I++
Sbjct: 226 EIVSIAKSLLE--YKIDGLIATNTTLDRDMVKGMSHAGEAGGLSGRPLQNKSTAVIAKFA 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
KG++PIIGVGG+ + A EKI+AGASLVQIY+ F+YHGP LV I
Sbjct: 284 AQLKGEIPIIGVGGIDNVIAAKEKIQAGASLVQIYSGFIYHGPQLVKNI 332
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+LL + K A Y VN+SSPNT LR LQ D L LL + + +L +K PI
Sbjct: 155 YLLCMDKVYPYADYIAVNISSPNTPGLRSLQYGDALNELLAALKIRQAELQVKYNKYVPI 214
Query: 103 LVKIAPDLSLDEKKDIADVVLD 124
+KIAPDLS E IA +L+
Sbjct: 215 ALKIAPDLSDQEIVSIAKSLLE 236
>gi|433590646|ref|YP_007280142.1| dihydroorotate dehydrogenase, subfamily 2 [Natrinema pellirubrum
DSM 15624]
gi|448331951|ref|ZP_21521201.1| dihydroorotate dehydrogenase 2 [Natrinema pellirubrum DSM 15624]
gi|433305426|gb|AGB31238.1| dihydroorotate dehydrogenase, subfamily 2 [Natrinema pellirubrum
DSM 15624]
gi|445628520|gb|ELY81827.1| dihydroorotate dehydrogenase 2 [Natrinema pellirubrum DSM 15624]
Length = 356
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPL 99
L+ G ++ G V Y P LR+ + +++ + + +++L
Sbjct: 79 ALEALGFGFVEIGTVTPYPQAGNDRPRLFRLREDEGMINRMGFNGQGMERVKSRLEADGT 138
Query: 100 P--PILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
P P+ V I S E + I D V D + A Y VVNVS PNT
Sbjct: 139 PGIPLGVNIGKMNSSSEAEAIEDYRRVFD------RLSPFADYVVVNVSCPNTPEEFDEG 192
Query: 156 AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ + L+ + +T+ E N V PILVKI PD + D+ D+V + +DG++ +
Sbjct: 193 SPEHLRAIFETL-EAENDRDV----PILVKIGPDDPEESIFDLVDIV--QEFGLDGIVAT 245
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NT+ R E L + +EE GGLSG+P+ ++ST +I + + T G LPI+GVGGV S + A+
Sbjct: 246 NTSTSR-EGLTSPEQEEWGGLSGKPIADRSTAVIRSLAEYTDGDLPIVGVGGVDSAESAY 304
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
KI+AGASLVQ+YT FVY GP RI L LL+++G+ SV AVGA
Sbjct: 305 AKIRAGASLVQLYTGFVYQGPSTAKRINRGLAALLERDGFASVEDAVGA 353
>gi|321254147|ref|XP_003192979.1| dihydroorotate dehydrogenase, mitochondrial precursor [Cryptococcus
gattii WM276]
gi|317459448|gb|ADV21192.1| Dihydroorotate dehydrogenase, mitochondrial precursor, putative
[Cryptococcus gattii WM276]
Length = 596
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 118/203 (58%), Gaps = 4/203 (1%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K AD D ++G+ G A V+NVSSPNT LR LQ K QL+ LL VVE RN++
Sbjct: 235 KASDADSNDDYIRGVRTLGPYADVVVINVSSPNTPGLRALQGKQQLERLLNDVVEERNRI 294
Query: 175 AVKP-LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY-LDARYKEE 232
A LP I VK+A DLS DE D+A V S V+G+IVSNTT+ R E L + +++
Sbjct: 295 AQGTGLPKIAVKVASDLSEDELADVASAVRSSG--VEGVIVSNTTIRRKELNLVSNNQDQ 352
Query: 233 TGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFV 292
GGLSG+PL + + + L +PIIG GG+ SG DA AGAS+VQIYTSF
Sbjct: 353 VGGLSGKPLFPYALNALKTLRPLLPPTIPIIGCGGISSGSDALTMANAGASIVQIYTSFG 412
Query: 293 YHGPPLVTRIKSELEELLQKEGY 315
+ G IK E+ E L E +
Sbjct: 413 FRGVGTPRLIKDEISERLNGESW 435
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPIL 103
++ G+ G A V+NVSSPNT LR LQ K QL+ LL VVE RN++A LP I
Sbjct: 245 YIRGVRTLGPYADVVVINVSSPNTPGLRALQGKQQLERLLNDVVEERNRIAQGTGLPKIA 304
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKH 162
VK+A DLS DE D+A V S V+G++ +N+ S N + L K +
Sbjct: 305 VKVASDLSEDELADVASAVRSSGVEGVIVSNTTIRRKELNLVSNNQDQVGGLSGKPLFPY 364
Query: 163 LLKTVVETR 171
L + R
Sbjct: 365 ALNALKTLR 373
>gi|386820228|ref|ZP_10107444.1| dihydroorotate dehydrogenase, subfamily 2 [Joostella marina DSM
19592]
gi|386425334|gb|EIJ39164.1| dihydroorotate dehydrogenase, subfamily 2 [Joostella marina DSM
19592]
Length = 338
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 113/169 (66%), Gaps = 5/169 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ L LL T+ + + + PIL+KIAPDL+ + D
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLNTLQQLNEK--KEKAKPILLKIAPDLTDSQLLD 229
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTK 257
I D+V+ +K + G+I +NTT+ R + L + K E GG+SG PLR +ST +I + + +
Sbjct: 230 IVDIVITTK--IAGVIATNTTISR-KGLISENKNEMGGMSGMPLRERSTAVIKFLAEKSN 286
Query: 258 GKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
G PI+GVGG+ S +DA EK+ AGASLVQ+YT F+Y GP ++ +I +
Sbjct: 287 GAFPIVGVGGIHSPEDAIEKLNAGASLVQLYTGFIYEGPAIIKKINKAI 335
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ L LL T+ + + + PIL+KIAPDL+ + D
Sbjct: 172 YFVVNVSSPNTPNLRALQDKEPLTALLNTLQQLNEK--KEKAKPILLKIAPDLTDSQLLD 229
Query: 118 IADVVLDS-VKGIL 130
I D+V+ + + G++
Sbjct: 230 IVDIVITTKIAGVI 243
>gi|260597343|ref|YP_003209914.1| dihydroorotate dehydrogenase 2 [Cronobacter turicensis z3032]
gi|260216520|emb|CBA29710.1| Dihydroorotate dehydrogenase [Cronobacter turicensis z3032]
Length = 336
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + L+ K P+ VKIAPDLS++
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQVLSQKHHKYVPVAVKIAPDLSVE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR +Y +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKYCDETGGLSGRPLQLKSTEIIRLLN 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EK+ AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKMAAGASLIQIYSGFIFKGPPLVKDIVTHL 336
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQVLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS++E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSVEELIQVADSLVRHNIDGVI 243
>gi|440704095|ref|ZP_20884978.1| dihydroorotate oxidase, partial [Streptomyces turgidiscabies Car8]
gi|440274312|gb|ELP62907.1| dihydroorotate oxidase, partial [Streptomyces turgidiscabies Car8]
Length = 376
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 165 EAVADYVKSTERLAAYADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTSRC 224
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL----DARYKEETGG 235
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L D +ETGG
Sbjct: 225 VPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-EGLGLTSDPALVKETGG 281
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+ +S E++ +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++FVY G
Sbjct: 282 LSGAPLKARSLEVLRRLYARVGDRITLVGVGGVENAEDAWQRILAGATLVQGYSAFVYEG 341
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P I L L+ Y +++ AVGA
Sbjct: 342 PFWGRTIHKGLAARLRTSPYATLADAVGA 370
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 181 ADYLVVNVSSPNTPGLRNLQATEALRPLLTAVREAADRTVTSRCVPLLVKIAPDLADEDV 240
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 241 DAVADLAVELGLDGII 256
>gi|409040839|gb|EKM50326.1| hypothetical protein PHACADRAFT_264935 [Phanerochaete carnosa
HHB-10118-sp]
Length = 493
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D + D V G+ F A VVNVSSPNT LR +Q++ L+ LL V + R+++
Sbjct: 224 KSSPPDSIKDFVTGVHAFAPYADVLVVNVSSPNTPGLRGMQSRTLLQELLAGVAQARDEV 283
Query: 175 AVK--PL--PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK 230
A P P IL+KIAPDL+ +E DIA V K VDG+IVSNTTV R L +
Sbjct: 284 ATSYTPTRKPKILLKIAPDLTTEEVADIAAAV--RKSGVDGVIVSNTTVQRPSSLHDANR 341
Query: 231 EETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTS 290
ETGGLSG PL+ + + + L +PI G GG+ +G DA E + G + VQ+YT
Sbjct: 342 VETGGLSGLPLKPYTLATLCALRPLLPASVPIFGCGGINTGADALEYAREGCTAVQLYTG 401
Query: 291 FVYHGPPLVTRIKSELEELLQKEG 314
F Y G RIK EL LL+ EG
Sbjct: 402 FGYDGVGAPRRIKDELAALLKAEG 425
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PL--P 100
++ G+ F A VVNVSSPNT LR +Q++ L+ LL V + R+++A P P
Sbjct: 234 FVTGVHAFAPYADVLVVNVSSPNTPGLRGMQSRTLLQELLAGVAQARDEVATSYTPTRKP 293
Query: 101 PILVKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTAN 150
IL+KIAPDL+ +E DIA V S V G++ V++ V SS + AN
Sbjct: 294 KILLKIAPDLTTEEVADIAAAVRKSGVDGVI----VSNTTVQRPSSLHDAN 340
>gi|348029296|ref|YP_004871982.1| dihydroorotate dehydrogenase [Glaciecola nitratireducens FR1064]
gi|347946639|gb|AEP29989.1| dihydroorotate dehydrogenase [Glaciecola nitratireducens FR1064]
Length = 302
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 110/170 (64%), Gaps = 4/170 (2%)
Query: 135 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSL 192
VA Y VN+SSPNT LR LQ + L LL + + + L + K PIL+KIAPDLS
Sbjct: 132 VASYITVNISSPNTPGLRNLQYGEALDSLLTGLKKRQLSLEIEHKKYVPILIKIAPDLSE 191
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
DE K IA ++ SK +DG+I +NTT+DR + +E GGLSGE L KS L +
Sbjct: 192 DEVKSIAASLIHSK--MDGVIATNTTLDREPVKGHEHAQEAGGLSGEVLTEKSLLLTKIL 249
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
K GK+PIIGVGG+ S +D ++I+AGASLVQ+Y+SF+Y GPPL+ +
Sbjct: 250 AKALDGKMPIIGVGGISSPQDVKQRIEAGASLVQVYSSFIYQGPPLIKEL 299
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 42 LQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL----K 97
L +L+ + K VA Y VN+SSPNT LR LQ + L LL + + QL+L K
Sbjct: 119 LDDYLICLDKVYAVASYITVNISSPNTPGLRNLQYGEALDSLLTGL--KKRQLSLEIEHK 176
Query: 98 PLPPILVKIAPDLSLDEKKDIADVVLDS 125
PIL+KIAPDLS DE K IA ++ S
Sbjct: 177 KYVPILIKIAPDLSEDEVKSIAASLIHS 204
>gi|416061666|ref|ZP_11581244.1| LOW QUALITY PROTEIN: dihydroorotate oxidase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347997535|gb|EGY38521.1| LOW QUALITY PROTEIN: dihydroorotate oxidase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 203
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 124/191 (64%), Gaps = 10/191 (5%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
SL++ KD + L+ K + A Y VN+SSPNT +LR+LQ D LL+++
Sbjct: 13 SLEQGKDDYLICLN------KAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKNR 66
Query: 171 RNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+ +LA + PI VKIAPDL+ E IAD +L + K+DG+I +NTT+ R + +
Sbjct: 67 QKELAEQYQKYVPIAVKIAPDLTEAELVQIADTLL--RHKMDGVIATNTTISRDNVTNLK 124
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E+ GGLSG+PL++KST +I+ +++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y
Sbjct: 125 NAEQRGGLSGKPLQHKSTAIIARLHRELKGQIPIIGSGGIDGVQNAQEKIRAGAELLQVY 184
Query: 289 TSFVYHGPPLV 299
+ +YHGP LV
Sbjct: 185 SGLIYHGPKLV 195
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K + A Y VN+SSPNT +LR+LQ D LL+++ + +LA + PI
Sbjct: 21 YLICLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKNRQKELAEQYQKYVPI 80
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL+ E IAD +L
Sbjct: 81 AVKIAPDLTEAELVQIADTLL 101
>gi|87121295|ref|ZP_01077185.1| Dihydroorotate dehydrogenase 2 [Marinomonas sp. MED121]
gi|86163452|gb|EAQ64727.1| Dihydroorotate dehydrogenase 2 [Marinomonas sp. MED121]
Length = 346
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 122/198 (61%), Gaps = 8/198 (4%)
Query: 104 VKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHL 163
V I +L+ + + D L + G++ + D Y N+SSPNT LR LQ + L L
Sbjct: 137 VNIGKNLTTSVEDAVQDY-LACLNGVMPYAD---YITANISSPNTPGLRSLQFGESLAEL 192
Query: 164 LKTVVETRNQL--AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR 221
+ +V+ + + + P+ VKIAPD++ DE K +AD + K+D +I +NTT+ R
Sbjct: 193 ISPLVDAKQRYFDSTGKHVPLAVKIAPDMTSDEIKMVADTL--QAQKIDAIIATNTTLSR 250
Query: 222 YEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAG 281
+Y +E GGLSG P+++ ST+++ + + +G+LPIIGVGG+ +G DA EK++AG
Sbjct: 251 EAVAGHKYADEAGGLSGAPVKDASTQVVRTLSEHLQGELPIIGVGGILTGDDAIEKLQAG 310
Query: 282 ASLVQIYTSFVYHGPPLV 299
ASLVQ+Y+ F+Y GP LV
Sbjct: 311 ASLVQLYSGFIYKGPELV 328
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPI 102
L G++ + D Y N+SSPNT LR LQ + L L+ +V+ + + + P+
Sbjct: 157 CLNGVMPYAD---YITANISSPNTPGLRSLQFGESLAELISPLVDAKQRYFDSTGKHVPL 213
Query: 103 LVKIAPDLSLDEKKDIADVV 122
VKIAPD++ DE K +AD +
Sbjct: 214 AVKIAPDMTSDEIKMVADTL 233
>gi|455650752|gb|EMF29511.1| dihydroorotate dehydrogenase 2 [Streptomyces gancidicus BKS 13-15]
Length = 368
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 126/210 (60%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
++ D VK + A Y VVNVSSPNT LR LQA DQL+ LL V E ++
Sbjct: 156 SEAAADYVKSAERLAPHADYLVVNVSSPNTPGLRSLQAVDQLRPLLTAVREAADRAVPAR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK----EETG 234
P+LVKIAPDL+ ++ +AD+ +D +DG+I +NTT+ R E L +ETG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVD--LGLDGIIATNTTIAR-EGLGLTSSPALVQETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S +++ +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y
Sbjct: 273 GLSGAPLKARSLQVLRRLYARVGDRITLVGVGGVENAEDAWQRILAGATLVQGYSAFIYQ 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP I L L+ Y +++ AVGA
Sbjct: 333 GPFWARSIHKGLAARLRTSPYATLADAVGA 362
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA DQL+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRSLQAVDQLRPLLTAVREAADRAVPARRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ +D + GI+
Sbjct: 233 DAVADLAVDLGLDGII 248
>gi|429095563|ref|ZP_19157669.1| Dihydroorotate dehydrogenase [Cronobacter dublinensis 582]
gi|426281903|emb|CCJ83782.1| Dihydroorotate dehydrogenase [Cronobacter dublinensis 582]
Length = 202
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + L+ K P+ VKIAPDLS++
Sbjct: 32 AGYIAINISSPNTPGLRSLQYGDALDDLLGAIKNQQQLLSQKHHKYVPVAVKIAPDLSIE 91
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR ++ +ETGGLSG PL+ KSTE+I +
Sbjct: 92 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKHCDETGGLSGRPLQLKSTEIIRLLS 149
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EK+ AGASL+QIY+ F++ GPPLV I + L
Sbjct: 150 QELQGRLPIIGVGGIDSVIAAREKMAAGASLIQIYSGFIFKGPPLVKEIVTHL 202
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + L+ K P+
Sbjct: 21 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLGAIKNQQQLLSQKHHKYVPV 80
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS++E +AD +V ++ G++
Sbjct: 81 AVKIAPDLSIEELIQVADSLVRHNIDGVI 109
>gi|383450065|ref|YP_005356786.1| Dihydroorotate oxidase [Flavobacterium indicum GPTSA100-9]
gi|380501687|emb|CCG52729.1| Dihydroorotate oxidase [Flavobacterium indicum GPTSA100-9]
Length = 346
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 119/180 (66%), Gaps = 7/180 (3%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LAVKPLPPILVKIAPD 189
D YFVVNVSSPNT LR+LQ ++ L LL+ + + NQ L++ PIL+KIAPD
Sbjct: 169 DYVDYFVVNVSSPNTPGLRELQDREPLTKLLQALQDLNNQKTVTLSLSKGKPILLKIAPD 228
Query: 190 LSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELI 249
L+ ++ DI +V D+K + G+I +NTT+ R + L + K E GGLSG+PL +STE+I
Sbjct: 229 LTNEQLLDIIAIVNDTK--IAGVIATNTTLSR-DGLQSVNKIEAGGLSGKPLTKRSTEVI 285
Query: 250 SEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
+ + + PIIGVGG+ + +DA EK+ AGASLVQ+YT F+Y GP L+ I ++ +L
Sbjct: 286 RFLAEKSNHAFPIIGVGGIHTAEDAIEKLNAGASLVQLYTGFIYEGPQLIKDINKKILQL 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ----LALKPLPPILVKIAPD 109
D YFVVNVSSPNT LR+LQ ++ L LL+ + + NQ L+L PIL+KIAPD
Sbjct: 169 DYVDYFVVNVSSPNTPGLRELQDREPLTKLLQALQDLNNQKTVTLSLSKGKPILLKIAPD 228
Query: 110 LSLDEKKDIADVVLDS-VKGIL 130
L+ ++ DI +V D+ + G++
Sbjct: 229 LTNEQLLDIIAIVNDTKIAGVI 250
>gi|213401439|ref|XP_002171492.1| dihydroorotate dehydrogenase [Schizosaccharomyces japonicus yFS275]
gi|211999539|gb|EEB05199.1| dihydroorotate dehydrogenase [Schizosaccharomyces japonicus yFS275]
Length = 442
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 115 KKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL 174
K D D +KG+ KFG+ A VVNVS PN + + LQ+KD L LL VV RN+L
Sbjct: 235 KNKNGDETEDFLKGVRKFGNFADILVVNVSCPNISGVCNLQSKDTLVPLLNKVVAERNKL 294
Query: 175 AVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK-EET 233
V P PPI+VKI PDL+ E DIA ++++K VDG+IV N+T R + L E
Sbjct: 295 -VSPQPPIVVKIGPDLTEAEISDIAHALVETK--VDGVIVCNSTGTRPKTLTPNKNLENV 351
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GG+SG ++ S ++ + K + PIIG GG+ SGKDA E +AGA+++QIYT+ Y
Sbjct: 352 GGISGPVMKPFSLRVLRLLRKDLPKEFPIIGCGGITSGKDAVEFARAGATMIQIYTAMTY 411
Query: 294 HGPPLVTRIKSELEELLQ 311
GP + +IK E+ E L
Sbjct: 412 EGPAAIRKIKDEIVEELN 429
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L G+ KFG+ A VVNVS PN + + LQ+KD L LL VV RN+L + P PPI+V
Sbjct: 245 FLKGVRKFGNFADILVVNVSCPNISGVCNLQSKDTLVPLLNKVVAERNKL-VSPQPPIVV 303
Query: 105 KIAPDLSLDEKKDIADVVLDS-VKGIL 130
KI PDL+ E DIA ++++ V G++
Sbjct: 304 KIGPDLTEAEISDIAHALVETKVDGVI 330
>gi|372266606|ref|ZP_09502654.1| dihydroorotate dehydrogenase 2 [Alteromonas sp. S89]
Length = 348
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLD 193
A Y NVSSPNT LR LQ L LL + E + QLA + P+ VKIAPD+ D
Sbjct: 165 ADYITANVSSPNTKGLRDLQFGGSLSQLLHALKEKQAQLAAEQDRYVPLAVKIAPDMDDD 224
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+A + + ++DG+I +NTT+D+ + + E GGLSG PLR++STE+I ++Y
Sbjct: 225 AIAQVAKTL--QEHEIDGVIATNTTIDKSSVENLEHGAEQGGLSGRPLRDRSTEVIRKLY 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEEL 309
G +PIIGVGG+F G+ A EKI+AGA+ VQIY+ F+Y GP ++ + +L
Sbjct: 283 SALDGSIPIIGVGGIFDGESAAEKIRAGATAVQIYSGFIYRGPEVIHEAAEAIAKL 338
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLD 113
A Y NVSSPNT LR LQ L LL + E + QLA + P+ VKIAPD+ D
Sbjct: 165 ADYITANVSSPNTKGLRDLQFGGSLSQLLHALKEKQAQLAAEQDRYVPLAVKIAPDMDDD 224
Query: 114 EKKDIA 119
+A
Sbjct: 225 AIAQVA 230
>gi|428222595|ref|YP_007106765.1| dihydroorotate oxidase A [Synechococcus sp. PCC 7502]
gi|427995935|gb|AFY74630.1| dihydroorotate oxidase A [Synechococcus sp. PCC 7502]
Length = 368
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 144/234 (61%), Gaps = 24/234 (10%)
Query: 97 KPLPPILV-----KIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANL 151
KP PI + KI P L E K+ D V S K + FGD YFVVNVSSPNT L
Sbjct: 148 KPSIPIGINLGKSKITP---LSEAKN--DYVA-SFKLLKDFGD---YFVVNVSSPNTVGL 198
Query: 152 RKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVV-LDSKCKVD 210
R LQA D L+ +++T+ Q P+LVKIAPDL+ DE DI VV + + +V
Sbjct: 199 RDLQAVDTLQEIIQTL-----QAENFEHKPLLVKIAPDLN-DE--DIQAVVQMSMQNQVA 250
Query: 211 GLIVSNTTVDRYEYLDAR-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVF 269
G+I +NTT+ R +E GGLSG+P++ +S E+I + ++++G + IIGVGG+
Sbjct: 251 GIIATNTTIARQNLQSPESLTKEIGGLSGQPVKKRSLEVIKLINQISQGSITIIGVGGIA 310
Query: 270 SGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
S ++A++KI AGASLVQ+YT VY G P+V +I + L + L + G + +S+AVG
Sbjct: 311 SAQNAWDKITAGASLVQLYTGLVYEGLPIVKQISAGLVQKLDQFGLSHISEAVG 364
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 11/92 (11%)
Query: 40 WVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL 99
+V F LL FGD YFVVNVSSPNT LR LQA D L+ +++T ++ N KPL
Sbjct: 172 YVASFKLLK--DFGD---YFVVNVSSPNTVGLRDLQAVDTLQEIIQT-LQAEN-FEHKPL 224
Query: 100 PPILVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
LVKIAPDL+ ++ + + + + + V GI+
Sbjct: 225 ---LVKIAPDLNDEDIQAVVQMSMQNQVAGII 253
>gi|444333864|ref|ZP_21149557.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443551174|gb|ELT59143.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 261
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 124/191 (64%), Gaps = 10/191 (5%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
SL++ KD + L+ K + A Y VN+SSPNT +LR+LQ D LL+++
Sbjct: 71 SLEQGKDDYLICLN------KAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKNR 124
Query: 171 RNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+ +LA + PI VKIAPDL+ E IAD +L + K+DG+I +NTT+ R + +
Sbjct: 125 QKELAEQYQKYVPIAVKIAPDLTEAELVQIADTLL--RHKMDGVIATNTTISRDNVTNLK 182
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E+ GGLSG+PL++KST +I+ +++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y
Sbjct: 183 NAEQRGGLSGKPLQHKSTAIIARLHRELKGQIPIIGSGGIDGVQNAQEKIRAGAELLQVY 242
Query: 289 TSFVYHGPPLV 299
+ +YHGP LV
Sbjct: 243 SGLIYHGPKLV 253
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K + A Y VN+SSPNT +LR+LQ D LL+++ + +LA + PI
Sbjct: 79 YLICLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKNRQKELAEQYQKYVPI 138
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL+ E IAD +L
Sbjct: 139 AVKIAPDLTEAELVQIADTLL 159
>gi|421897073|ref|ZP_16327449.1| dihydroorotate dehydrogenase protein, partial [Ralstonia
solanacearum MolK2]
gi|206588238|emb|CAQ18799.1| dihydroorotate dehydrogenase protein, partial [Ralstonia
solanacearum MolK2]
Length = 328
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + + +LA K P+ +KIAPDL D
Sbjct: 156 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRDAQQRLADQHKRYVPVALKIAPDLDDD 215
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 216 QIANIADALL--RHRMDGVIATNTTIRREAVTGLPHAEEAGGLSGQPVREGSTRVIRALR 273
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 274 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 326
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + + +LA K P+ +KIAPDL D
Sbjct: 156 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRDAQQRLADQHKRYVPVALKIAPDLDDD 215
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 216 QIANIADALL 225
>gi|72161331|ref|YP_288988.1| dihydroorotate dehydrogenase 2 [Thermobifida fusca YX]
gi|123629869|sp|Q47RF2.1|PYRD_THEFY RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|71915063|gb|AAZ54965.1| dihydroorotate oxidase A [Thermobifida fusca YX]
Length = 377
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 130/210 (61%), Gaps = 10/210 (4%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
+D V D V +F D+A Y VVNVSSPNT LR LQA ++L+ LL V T ++ A +P
Sbjct: 159 SDAVADYVTSARRFADLADYLVVNVSSPNTPGLRDLQATERLRPLLSAVRRTLDE-AGRP 217
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE-----T 233
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTTV R A EE
Sbjct: 218 DLPLLVKIAPDLADEDIDAVADLAVE--LGLDGIIATNTTVSRDGL--ATDPEEVAALGA 273
Query: 234 GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVY 293
GGLSG PL+ ++ +++ + +L +I VGG+ + +DA+ +I+AGA+LVQ YT +Y
Sbjct: 274 GGLSGAPLKERALQVLRRLRARVGDRLVLIAVGGIETPEDAWARIRAGATLVQGYTGLIY 333
Query: 294 HGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
GP RI + L +++G+ S+++AVG
Sbjct: 334 GGPLWPRRIHRGVAALARRDGFASIAEAVG 363
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+F D+A Y VVNVSSPNT LR LQA ++L+ LL V T ++ A +P P+LVKIAPDL
Sbjct: 171 RFADLADYLVVNVSSPNTPGLRDLQATERLRPLLSAVRRTLDE-AGRPDLPLLVKIAPDL 229
Query: 111 SLDEKKDIADVVLD-SVKGIL 130
+ ++ +AD+ ++ + GI+
Sbjct: 230 ADEDIDAVADLAVELGLDGII 250
>gi|305664838|ref|YP_003861125.1| dihydroorotate dehydrogenase [Maribacter sp. HTCC2170]
gi|88707960|gb|EAR00199.1| dihydroorotate dehydrogenase [Maribacter sp. HTCC2170]
Length = 346
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 117/174 (67%), Gaps = 7/174 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL----PPILVKIAPDLSLD 193
YFVVNVSSPNT LR+LQ K+ L LLK + + ++A+K PIL+KIAPDL+ D
Sbjct: 171 YFVVNVSSPNTPGLRELQDKEPLTALLKELKKENKKIAIKGTGNKEKPILLKIAPDLTND 230
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY-KEETGGLSGEPLRNKSTELISEM 252
+ DI +V D+K +DG+I +NTT+ R + + EE GGLSG+PL+ +STE+I +
Sbjct: 231 QLLDIIKIVEDTK--IDGIIATNTTIGRENLKSSLFITEEKGGLSGKPLKTRSTEVIRFL 288
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ + PIIGVGG+ S +DA EK++AGA L+Q+YT F+Y GP L+ RI L
Sbjct: 289 SEKSNKAFPIIGVGGIHSAEDAIEKLEAGADLIQLYTGFIYEGPALIKRINKAL 342
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPL----PPILVKIAPDLSLD 113
YFVVNVSSPNT LR+LQ K+ L LLK + + ++A+K PIL+KIAPDL+ D
Sbjct: 171 YFVVNVSSPNTPGLRELQDKEPLTALLKELKKENKKIAIKGTGNKEKPILLKIAPDLTND 230
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI +V D+ + GI+
Sbjct: 231 QLLDIIKIVEDTKIDGII 248
>gi|148656973|ref|YP_001277178.1| dihydroorotate oxidase [Roseiflexus sp. RS-1]
gi|189038447|sp|A5UX75.1|PYRD_ROSS1 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|148569083|gb|ABQ91228.1| dihydroorotate oxidase A [Roseiflexus sp. RS-1]
Length = 361
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 11/205 (5%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP- 180
V D V + +A Y VN+SSPNT LR+L + L+ LL + L P P
Sbjct: 160 VEDYVATFVALAPIADYVAVNISSPNTPGLRRLHERAALETLLHELTRLNRAL---PHPR 216
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCK--VDGLIVSNTTVDRYEYLDARYKEETGGLSG 238
PI +K++PD E D + V+ + C + I +NTT+ R + L +R ETGGLSG
Sbjct: 217 PIALKVSPD----ETPDQLEAVVRAGCDAGIAAFIATNTTLARDD-LHSRLAIETGGLSG 271
Query: 239 EPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPL 298
PL ++ ++I +Y+LT G P+IGVGG+ + +DA++ I+AGA L+QIYT VY GP +
Sbjct: 272 RPLTQRARQVIGAIYRLTHGAPPVIGVGGIATAEDAYQHIRAGARLIQIYTGMVYAGPAI 331
Query: 299 VTRIKSELEELLQKEGYNSVSQAVG 323
IK L L+++G+ S+ +AVG
Sbjct: 332 ARDIKQGLARRLRRDGFTSLEEAVG 356
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + +A Y VN+SSPNT LR+L + L+ LL + TR AL PI +
Sbjct: 163 YVATFVALAPIADYVAVNISSPNTPGLRRLHERAALETLLHEL--TRLNRALPHPRPIAL 220
Query: 105 KIAPDLSLDEKKDIADVVLDSVKGILKF 132
K++PD + D+ + + D+ GI F
Sbjct: 221 KVSPDETPDQLEAVVRAGCDA--GIAAF 246
>gi|410941881|ref|ZP_11373674.1| dihydroorotate dehydrogenase (fumarate) [Leptospira noguchii str.
2006001870]
gi|410783109|gb|EKR72107.1| dihydroorotate dehydrogenase (fumarate) [Leptospira noguchii str.
2006001870]
Length = 372
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 122 VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPP 181
V D V + K A Y V+N+SSPNT LR Q ++ L++ + R L P
Sbjct: 166 VEDYVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKIP 222
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+ VK APD+ + E + + + L K+DG+I++NTT+D+ + E+ GGLSG PL
Sbjct: 223 LFVKFAPDMEIKELEALLETSLS--LKIDGVILTNTTIDKSYLKEYPNVEKEGGLSGTPL 280
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+N+STE + Y++ K ++PIIGVGG+ S K A EKI AGA L+QIYT ++Y GP L R
Sbjct: 281 KNRSTEFVRIAYRILKRRIPIIGVGGIDSEKTALEKILAGADLIQIYTGYIYQGPFLPMR 340
Query: 302 IKSELEELLQKEGYNSVSQAVG 323
I L+ L+K+ +VS VG
Sbjct: 341 ILEFLDRFLEKQDLKAVSDLVG 362
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q ++ L++ + R L P+ V
Sbjct: 169 YVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKIPLFV 225
Query: 105 KIAPDLSLDE 114
K APD+ + E
Sbjct: 226 KFAPDMEIKE 235
>gi|83745874|ref|ZP_00942931.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum UW551]
gi|207743006|ref|YP_002259398.1| dihydroorotate dehydrogenase protein [Ralstonia solanacearum
IPO1609]
gi|83727564|gb|EAP74685.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum UW551]
gi|206594403|emb|CAQ61330.1| dihydroorotate dehydrogenase protein [Ralstonia solanacearum
IPO1609]
Length = 344
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + + +LA K P+ +KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRDAQQRLADQHKRYVPVALKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 232 QIANIADALL--RHRMDGVIATNTTIRREAVTGLPHAEEAGGLSGQPVREGSTRVIRALR 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 290 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 342
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + + +LA K P+ +KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRDAQQRLADQHKRYVPVALKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 232 QIANIADALL 241
>gi|435848490|ref|YP_007310740.1| dihydroorotate oxidase A [Natronococcus occultus SP4]
gi|433674758|gb|AGB38950.1| dihydroorotate oxidase A [Natronococcus occultus SP4]
Length = 356
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 19/289 (6%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALKPL 99
L+ G ++ G V Y P LR +A +++ + + R +L +
Sbjct: 79 ALEALGFGFVEVGTVTPYPQAGNDRPRLFRLRTDEAMINRMGFNGQGMERVRARLERRGP 138
Query: 100 P--PILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
P P+ V I S DE + I D V D + A Y VVNVS PNT +
Sbjct: 139 PQVPLGVNIGKMNSSDEDEAIEDYRRVFD------RLAPFADYVVVNVSCPNTPDEFDEA 192
Query: 156 AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
+ D L + +T+ + PILVKI PD D ++ +V D +DG++ +
Sbjct: 193 SPDHLHSIFETLAAENDDDV-----PILVKIGPDSPEDSMLELLGIVEDH--DLDGIVAT 245
Query: 216 NTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAF 275
NTT R E +++ E GGLSG PL +STE+I + + LPI+GVGGV S + A+
Sbjct: 246 NTTTGR-EGVNSPKAAERGGLSGAPLAERSTEVIRTLARNADDDLPIVGVGGVDSAEGAY 304
Query: 276 EKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
EKI+AGASLVQ+YT FVY GP RI L +LL+++G++SV AVGA
Sbjct: 305 EKIRAGASLVQLYTGFVYGGPGTARRINQGLVDLLEQDGFSSVEDAVGA 353
>gi|398349058|ref|ZP_10533761.1| dihydroorotate dehydrogenase 2 [Leptospira broomii str. 5399]
Length = 368
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D + I K A Y V+NVSSPNT LR Q +L++L + RN L
Sbjct: 167 AVEDYLYSIRKLSPFADYLVINVSSPNTPGLRNFQ---KLENLFNLINGIRNGLGGAFPA 223
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P VK APDL ++I + V D ++ G+I++NTT+D+ E+ GG+SG P
Sbjct: 224 PTFVKFAPDLEERNFEEIIESVPD--LRISGVILTNTTIDKSVLKRFPNVEQEGGVSGGP 281
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
LR +ST + Y+ +GK+PIIGVGG+ SG+ A EKI AGA L+Q+YT ++Y GP L
Sbjct: 282 LRARSTRFVQLAYRKLRGKIPIIGVGGIDSGETALEKILAGADLIQVYTGYIYQGPLLPR 341
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
RI L++ ++K G S+S+ VG
Sbjct: 342 RILEYLDKTIEKFGAKSISEIVG 364
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L I K A Y V+NVSSPNT LR Q +L++L + RN L P V
Sbjct: 171 YLYSIRKLSPFADYLVINVSSPNTPGLRNFQ---KLENLFNLINGIRNGLGGAFPAPTFV 227
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K APDL ++I + V D
Sbjct: 228 KFAPDLEERNFEEIIESVPD 247
>gi|418678458|ref|ZP_13239732.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418686627|ref|ZP_13247792.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418741197|ref|ZP_13297573.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|421091518|ref|ZP_15552288.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
200802841]
gi|400321648|gb|EJO69508.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|409999674|gb|EKO50360.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
200802841]
gi|410738698|gb|EKQ83431.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410751792|gb|EKR08769.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 372
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 5/203 (2%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D V + K A Y V+N+SSPNT LR Q ++ L++ + R L
Sbjct: 165 AVEDYVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKT 221
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P+ VK APD+ + E + + + L K+DG+I++NTT+D+ + E+ GGLSG P
Sbjct: 222 PLFVKFAPDMQIKELEALLETSLS--LKIDGVILTNTTIDKSYLKEYPNVEKEGGLSGTP 279
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L+N+STE + Y++ K ++PIIGVGG+ S K A EKI AGA L+QIYT ++Y GP L
Sbjct: 280 LKNRSTEFVRVAYRILKRRIPIIGVGGIDSEKTALEKILAGADLIQIYTGYIYQGPFLPM 339
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
RI L+ L+K+ +V+ VG
Sbjct: 340 RILEFLDRFLEKQDLKTVADLVG 362
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q ++ L++ + R L P+ V
Sbjct: 169 YVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKTPLFV 225
Query: 105 KIAPDLSLDE 114
K APD+ + E
Sbjct: 226 KFAPDMQIKE 235
>gi|429192903|ref|YP_007178581.1| dihydroorotate dehydrogenase, subfamily 2 [Natronobacterium
gregoryi SP2]
gi|448326750|ref|ZP_21516095.1| dihydroorotate dehydrogenase 2 [Natronobacterium gregoryi SP2]
gi|429137121|gb|AFZ74132.1| dihydroorotate dehydrogenase, subfamily 2 [Natronobacterium
gregoryi SP2]
gi|445610093|gb|ELY63869.1| dihydroorotate dehydrogenase 2 [Natronobacterium gregoryi SP2]
Length = 356
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 135/227 (59%), Gaps = 12/227 (5%)
Query: 98 PLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAK 157
P P+ V + S DE + I D + + A Y VNVS PNT + +
Sbjct: 139 PNVPLGVNVGKMNSSDEDEAIEDYR----RVFNRLSSFADYVAVNVSCPNTPDEFDETSP 194
Query: 158 DQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNT 217
+ L+ ++ +E N + PILVKI PD + D+ DVV D +VDG+I +N+
Sbjct: 195 EHLERIVD-AIEAENDRDI----PILVKIGPDSPDESILDLVDVVRD--LEVDGIIATNS 247
Query: 218 TVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEK 277
+ R + L++ ++E GGLSG+P+ N+ST ++ + + T G+LPI+GVGGV S + A+EK
Sbjct: 248 STSR-DGLESPKRDEWGGLSGKPIENRSTAVVRAIAEHTDGELPIMGVGGVDSAESAYEK 306
Query: 278 IKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
I+AGASLVQ+YT F Y GP +I L +LL+++G++SV +AVGA
Sbjct: 307 IRAGASLVQLYTGFAYGGPSTAKQINRGLVDLLERDGFSSVEEAVGA 353
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ A Y VNVS PNT + + + L+ ++ +E N + PILVKI PD
Sbjct: 168 RLSSFADYVAVNVSCPNTPDEFDETSPEHLERIVD-AIEAENDRDI----PILVKIGPDS 222
Query: 111 SLDEKKDIADVVLD-SVKGIL 130
+ D+ DVV D V GI+
Sbjct: 223 PDESILDLVDVVRDLEVDGII 243
>gi|421129905|ref|ZP_15590105.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
2008720114]
gi|410359280|gb|EKP06389.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
2008720114]
Length = 372
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 5/203 (2%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D V + K A Y V+N+SSPNT LR Q ++ L++ + R L
Sbjct: 165 AVEDYVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKT 221
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P+ VK APD+ + E + + + L K+DG+I++NTT+D+ + E+ GGLSG P
Sbjct: 222 PLFVKFAPDMQIKELEALLETSLS--LKIDGVILTNTTIDKSYLKEYPNVEKEGGLSGTP 279
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L+N+STE + Y++ K ++PIIGVGG+ S K A EKI AGA L+QIYT ++Y GP L
Sbjct: 280 LKNRSTEFVRVAYRILKRRIPIIGVGGIDSEKTALEKILAGADLIQIYTGYIYQGPFLPM 339
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
RI L+ L+K+ +V+ VG
Sbjct: 340 RILEFLDRFLEKQDLKTVADLVG 362
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q ++ L++ + R L P+ V
Sbjct: 169 YVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKTPLFV 225
Query: 105 KIAPDLSLDE 114
K APD+ + E
Sbjct: 226 KFAPDMQIKE 235
>gi|392541423|ref|ZP_10288560.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas piscicida
JCM 20779]
Length = 336
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D + + K + A Y VN+SSPNT LR LQ + L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGEALDDLLQSLKNEQMDLIAKHNKSVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPD+ + IA+ +++++ +DG+I +NTT+ R + + E GGLSG P+
Sbjct: 214 MLVKIAPDVDGVQLTQIAESLVNNR--IDGVIATNTTLARDAVENLEHGNEAGGLSGRPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R KST ++SE+ ++T GKLPIIGVGG+ S + A EK AGA LVQ+YT F+Y GP LV +
Sbjct: 272 REKSTHVVSELKRITDGKLPIIGVGGIDSAESAKEKFSAGADLVQVYTGFIYEGPALVKK 331
Query: 302 IKSEL 306
I S L
Sbjct: 332 IVSSL 336
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ + L LL+++ + L K P+LVKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGEALDDLLQSLKNEQMDLIAKHNKSVPMLVKIAPDVDGV 225
Query: 114 EKKDIAD-VVLDSVKGIL 130
+ IA+ +V + + G++
Sbjct: 226 QLTQIAESLVNNRIDGVI 243
>gi|381151381|ref|ZP_09863250.1| dihydroorotate dehydrogenase, subfamily 2 [Methylomicrobium album
BG8]
gi|380883353|gb|EIC29230.1| dihydroorotate dehydrogenase, subfamily 2 [Methylomicrobium album
BG8]
Length = 340
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 113/179 (63%), Gaps = 4/179 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D + G K A Y +N+SSPNT NLR+LQ D+LK+LL + E + LA K L P
Sbjct: 155 DYLAGFRKVYPWAGYVTINISSPNTKNLRQLQQTDELKNLLSALKEEQFVLAEKHLRYVP 214
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
++VKIAPDL+ +E + I+ +++ +DG+I +NTT+DR E GGLSG P+
Sbjct: 215 VVVKIAPDLNDEEIEQISRLLI--AFAIDGVIATNTTLDRTAIGGHPLAAEAGGLSGAPI 272
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
++KST ++ + + G+ PII GG+ SG DA EKI AGASLVQIY+ +Y GP L+
Sbjct: 273 KDKSTAVVRRLAEALNGRCPIIAAGGILSGDDAREKIAAGASLVQIYSGLIYQGPQLIA 331
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 2 VGLDESTCSRILSRVFRSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVV 61
+G + ++ RV R ++ N+ +F + +L G K A Y +
Sbjct: 114 MGFNNLGVDHLIERV-RQADYKGILGINIGKNFDTPIEQAAEDYLAGFRKVYPWAGYVTI 172
Query: 62 NVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLDEKKDIA 119
N+SSPNT NLR+LQ D+LK+LL + E + LA K L P++VKIAPDL+ +E + I+
Sbjct: 173 NISSPNTKNLRQLQQTDELKNLLSALKEEQFVLAEKHLRYVPVVVKIAPDLNDEEIEQIS 232
Query: 120 DVVL 123
+++
Sbjct: 233 RLLI 236
>gi|345848729|ref|ZP_08801748.1| dihydroorotate dehydrogenase 2 [Streptomyces zinciresistens K42]
gi|345639814|gb|EGX61302.1| dihydroorotate dehydrogenase 2 [Streptomyces zinciresistens K42]
Length = 370
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 5/208 (2%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++ A
Sbjct: 159 DAAGDYVKSAERLAPYADYLVVNVSSPNTPGLRNLQAAESLRPLLSAVREAADRTATGRR 218
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK---EETGGL 236
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R A +ETGGL
Sbjct: 219 VPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAREGLGLASAPALVKETGGL 276
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG PL+ +S E++ +Y ++ ++GVGGV +DA+++I AGA+LVQ Y++FVY GP
Sbjct: 277 SGAPLKARSLEVLRRLYARVGDRITLVGVGGVEDAEDAWQRILAGATLVQGYSAFVYQGP 336
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ L L+ Y +++ AVGA
Sbjct: 337 FWARAVHKGLAARLRTSPYATLADAVGA 364
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ A P+LVKIAPDL+ ++
Sbjct: 175 ADYLVVNVSSPNTPGLRNLQAAESLRPLLSAVREAADRTATGRRVPLLVKIAPDLADEDV 234
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 235 DAVADLAVELGLDGII 250
>gi|375148781|ref|YP_005011222.1| Dihydroorotate dehydrogenase [Niastella koreensis GR20-10]
gi|361062827|gb|AEW01819.1| Dihydroorotate dehydrogenase [Niastella koreensis GR20-10]
Length = 379
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 116/181 (64%), Gaps = 11/181 (6%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV-----ETRNQLAVKPLPPILVKIAP 188
D YFVVNVSSPNT LR+LQ KD L+ +L + E+ + KP PIL+KIAP
Sbjct: 199 DCVDYFVVNVSSPNTPGLRELQEKDSLRKILSHLQTINQQESSEETGRKP-KPILLKIAP 257
Query: 189 DLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEET---GGLSGEPLRNKS 245
DL+ + D+ D+ L+ K+DGL+ +NTT+ R + + E GGLSG P+R ++
Sbjct: 258 DLTPQQIDDVIDLALE--IKLDGLVATNTTISRDQLQTTGQELEAIGAGGLSGAPVRKRA 315
Query: 246 TELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSE 305
TE++ +++ T G++P+I GG+F+ DA EK+ AGASLVQ++T F+Y GP +V I +
Sbjct: 316 TEIVRYIHEKTNGQIPVIASGGIFTAADAKEKLAAGASLVQVWTGFIYEGPGIVKNICNG 375
Query: 306 L 306
L
Sbjct: 376 L 376
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV-----VETRNQLALKPLPPILVKIAP 108
D YFVVNVSSPNT LR+LQ KD L+ +L + E+ + KP PIL+KIAP
Sbjct: 199 DCVDYFVVNVSSPNTPGLRELQEKDSLRKILSHLQTINQQESSEETGRKP-KPILLKIAP 257
Query: 109 DLSLDEKKDIADVVLD 124
DL+ + D+ D+ L+
Sbjct: 258 DLTPQQIDDVIDLALE 273
>gi|163745789|ref|ZP_02153148.1| dihydroorotate dehydrogenase [Oceanibulbus indolifex HEL-45]
gi|161380534|gb|EDQ04944.1| dihydroorotate dehydrogenase [Oceanibulbus indolifex HEL-45]
Length = 346
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L K D D + + + + VNVSSPNT LR LQ K L LL+ V+E
Sbjct: 137 LNLGANKTSPDRAADFARVMTAARNHVDFATVNVSSPNTEKLRDLQGKAALSALLEGVME 196
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
R P+ +KIAPDLS E +D+A+V +S V +I +NTT+DR A +
Sbjct: 197 VRGAT------PVFLKIAPDLSPAEIEDVAEVAQNSG--VAAIIATNTTLDRTGLASA-H 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
E GGLSG PL +ST +++ + LT +P+IGVGGV + A+ KI AGAS +Q+YT
Sbjct: 248 ASEAGGLSGAPLFERSTRVLARLAGLTD--IPLIGVGGVSDAETAYAKICAGASALQLYT 305
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ V+ G LV I S LE LL ++G+ +V++AVG+
Sbjct: 306 ALVFGGLGLVREITSGLETLLARDGFATVAEAVGS 340
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
+ VNVSSPNT LR LQ K L LL+ V+E R P+ +KIAPDLS E +D
Sbjct: 165 FATVNVSSPNTEKLRDLQGKAALSALLEGVMEVRGAT------PVFLKIAPDLSPAEIED 218
Query: 118 IADVVLDS 125
+A+V +S
Sbjct: 219 VAEVAQNS 226
>gi|448583003|ref|ZP_21646482.1| dihydroorotate dehydrogenase 2 [Haloferax gibbonsii ATCC 33959]
gi|445730457|gb|ELZ82046.1| dihydroorotate dehydrogenase 2 [Haloferax gibbonsii ATCC 33959]
Length = 351
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 133/233 (57%), Gaps = 13/233 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+LA PLP I V + +L+L E + D + D A YFVVNVS PN+ R
Sbjct: 131 RLAAGPLPDIPVGV--NLALSEVTPTEEAPDDYRYTYERVADGADYFVVNVSCPNSEGFR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
LQ +D L+ +L T+V+ P+LVK++PDL +D +VV + +DG+
Sbjct: 189 DLQNRDSLEAILGTLVDAGAD-------PLLVKLSPDLPDPAVEDALEVV--DELGLDGV 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I SNTT R + L + E GGLSG+P+ ++T +I + + T +PI+GVGGV +
Sbjct: 240 IASNTTTSRPDTLRNPNRAERGGLSGKPIEAEATNMIRFIAERTD--VPIVGVGGVSDAE 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
A+ KI+AGA +VQ+YT VY GP + I L +LL ++G++ V+ AVG+
Sbjct: 298 SAYRKIRAGAEMVQLYTGMVYEGPSIARDINRGLLDLLDRDGFDDVADAVGSG 350
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ D A YFVVNVS PN+ R LQ +D L+ +L T+V+ P+LVK++PDL
Sbjct: 167 RVADGADYFVVNVSCPNSEGFRDLQNRDSLEAILGTLVDAGAD-------PLLVKLSPDL 219
Query: 111 SLDEKKDIADVV 122
+D +VV
Sbjct: 220 PDPAVEDALEVV 231
>gi|389775130|ref|ZP_10193180.1| dihydroorotate dehydrogenase 2 [Rhodanobacter spathiphylli B39]
gi|388437463|gb|EIL94256.1| dihydroorotate dehydrogenase 2 [Rhodanobacter spathiphylli B39]
Length = 345
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 8/213 (3%)
Query: 110 LSLDEKKDIAD--VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV 167
+++ + KD + V D + + K + A Y VN+SSPNTA LR LQ + L + +
Sbjct: 137 INIGKNKDTPNEKAVNDYLTCLHKVHEHASYVTVNISSPNTAGLRDLQQEATLYKFISVL 196
Query: 168 VETRNQLAVKP--LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL 225
+ +L + P+L+KIAPDLS E IA+V+L + +DG+I SNTT+D
Sbjct: 197 RAAQERLGSQAGKRKPMLLKIAPDLSEAELDAIAEVLL--RTGIDGVICSNTTIDHESVA 254
Query: 226 DARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
D E GGLSG+PL +ST +++ M+K +G++P+IGVGG+ G DA EK+ AGASLV
Sbjct: 255 DDPRGGEAGGLSGKPLFARSTAVLAGMHKRLQGRVPLIGVGGILEGSDAAEKLDAGASLV 314
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSV 318
Q+Y+ VY GP LV +E+ Q+E ++V
Sbjct: 315 QVYSGLVYRGPHLVGECVNEIRR--QREATHAV 345
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+L + K + A Y VN+SSPNTA LR LQ + L + + + +L + P+
Sbjct: 154 YLTCLHKVHEHASYVTVNISSPNTAGLRDLQQEATLYKFISVLRAAQERLGSQAGKRKPM 213
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
L+KIAPDLS E IA+V+L
Sbjct: 214 LLKIAPDLSEAELDAIAEVLL 234
>gi|54024885|ref|YP_119127.1| dihydroorotate dehydrogenase 2 [Nocardia farcinica IFM 10152]
gi|73913691|sp|Q5YVM8.1|PYRD_NOCFA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|54016393|dbj|BAD57763.1| putative dihydroorotate dehydrogenase [Nocardia farcinica IFM
10152]
Length = 369
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 128/204 (62%), Gaps = 15/204 (7%)
Query: 132 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLS 191
G +A + VVNVSSPNT LR LQA + L+ LL+TV+ET + P+LVKIAPDLS
Sbjct: 166 LGPLADFVVVNVSSPNTPGLRDLQAVESLRPLLRTVLETVADGGRRV--PVLVKIAPDLS 223
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE-------TGGLSGEPLRNK 244
++ +AD+ ++ + G++ +NTT+ R D + + GGLSG P+ ++
Sbjct: 224 DEDIDAVADLAVE--LGLAGIVATNTTIRR----DGLHTDPEDVAAMGAGGLSGAPVADR 277
Query: 245 STELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKS 304
S E++ +Y+ +L +I VGG+ + + A++++ AGASL+Q YT F+Y GP +I
Sbjct: 278 SLEVLRRLYRRVGDRLALISVGGIETPEQAYQRVLAGASLLQGYTGFIYGGPFWTRKIHR 337
Query: 305 ELEELLQKEGYNSVSQAVGAAHKS 328
L ELL+++GY S+++AVGA H+
Sbjct: 338 GLAELLRRDGYTSLTEAVGAEHRG 361
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
G +A + VVNVSSPNT LR LQA + L+ LL+TV+ET + P+LVKIAPDLS
Sbjct: 166 LGPLADFVVVNVSSPNTPGLRDLQAVESLRPLLRTVLETVADGGRR--VPVLVKIAPDLS 223
Query: 112 LDEKKDIADVVLD 124
++ +AD+ ++
Sbjct: 224 DEDIDAVADLAVE 236
>gi|330445998|ref|ZP_08309650.1| dihydroorotate oxidase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490189|dbj|GAA04147.1| dihydroorotate oxidase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 336
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL + E + +LA K P+ +KIAPDL
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDDLLSQLKEKQAELAEKHGKYVPLALKIAPDLDDH 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E + D ++ + K+DG+I +NTT+DR + +E GGLSG PL+NKSTE+I +M
Sbjct: 226 EILQVCDSLI--RNKIDGVIGTNTTLDRSLVQGMEHCDEVGGLSGRPLQNKSTEVIRKMA 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ KG++PIIGVGG+ S A EK+ AGASLVQ+Y+ F+YHGP LV I + L
Sbjct: 284 EALKGEIPIIGVGGIDSAISAREKMMAGASLVQVYSGFIYHGPRLVKDIVNGL 336
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + E + +LA K P+
Sbjct: 155 YLICMDKVYQYAGYIAVNISSPNTPGLRSLQYGEALDDLLSQLKEKQAELAEKHGKYVPL 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
+KIAPDL E + D ++ + + G++
Sbjct: 215 ALKIAPDLDDHEILQVCDSLIRNKIDGVI 243
>gi|269102657|ref|ZP_06155354.1| dihydroorotate dehydrogenase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162555|gb|EEZ41051.1| dihydroorotate dehydrogenase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 315
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 4/169 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ + L LL + + +LA P+ +KIAPDL
Sbjct: 144 AGYIAINISSPNTPGLRTLQYGEMLDDLLSQLKAKQAELAELHGKYVPLALKIAPDLDDH 203
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E + I D +L + K+DG+I +NTT+DR ++ +E GGLSG PL+NKST +I++M
Sbjct: 204 EIEQICDSLL--RNKIDGVIGTNTTLDRTLVEGMKHCDEMGGLSGRPLQNKSTAVIAKMA 261
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ KG++PIIGVGG+ S A EK++AGASLVQIYT F+YHGP LV I
Sbjct: 262 ECLKGEIPIIGVGGIDSAISAREKMQAGASLVQIYTGFIYHGPKLVKDI 310
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K A Y +N+SSPNT LR LQ + L LL + + +LA P+
Sbjct: 133 YLICMDKVYPYAGYIAINISSPNTPGLRTLQYGEMLDDLLSQLKAKQAELAELHGKYVPL 192
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+KIAPDL E + I D +L + + G++
Sbjct: 193 ALKIAPDLDDHEIEQICDSLLRNKIDGVI 221
>gi|386333363|ref|YP_006029532.1| dihydroorotate dehydrogenase [Ralstonia solanacearum Po82]
gi|334195811|gb|AEG68996.1| dihydroorotate dehydrogenase [Ralstonia solanacearum Po82]
Length = 372
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + + +LA K P+ +KIAPDL D
Sbjct: 200 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRDAQQRLADQHKRYVPVALKIAPDLDDD 259
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 260 QIANIADALL--RHRMDGVIATNTTIRREAVTGLPHAEEAGGLSGQPVREGSTRVIRALR 317
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 318 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 370
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + + +LA K P+ +KIAPDL D
Sbjct: 200 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRDAQQRLADQHKRYVPVALKIAPDLDDD 259
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 260 QIANIADALL 269
>gi|448442083|ref|ZP_21589462.1| dihydroorotate dehydrogenase 2 [Halorubrum saccharovorum DSM 1137]
gi|445688231|gb|ELZ40497.1| dihydroorotate dehydrogenase 2 [Halorubrum saccharovorum DSM 1137]
Length = 351
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 13/232 (5%)
Query: 93 QLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLR 152
+L KPLP + V I ++ + +A+ D + + + YFVVNVSSPNT LR
Sbjct: 131 RLDRKPLPEVPVGI--NIGKSKSTALAEAPDDYLYTYERVAEAGDYFVVNVSSPNTPGLR 188
Query: 153 KLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGL 212
+LQ + L+ +L + + P+LVK++PDL +D VV D +DG+
Sbjct: 189 ELQNRAALEEILGALADAGAD-------PLLVKLSPDLPEPAVEDALGVVDD--LGLDGI 239
Query: 213 IVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
I +NTT R L + + E GGLSG+P+ + +TE + + + T +P+IGVGG+ + K
Sbjct: 240 IATNTTTSRPNSLKSSQQAERGGLSGKPIESIATERVRFVAERTD--VPVIGVGGISNAK 297
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGAS+VQ+YT VY GP L I + +LL ++G++SV AVGA
Sbjct: 298 GAYEKIRAGASVVQLYTGLVYEGPGLARDINEGIIDLLDRDGFDSVEDAVGA 349
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + + YFVVNVSSPNT LR+LQ + L+ +L + + P+LV
Sbjct: 161 YLYTYERVAEAGDYFVVNVSSPNTPGLRELQNRAALEEILGALADAGAD-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD-SVKGIL 130
K++PDL +D VV D + GI+
Sbjct: 214 KLSPDLPEPAVEDALGVVDDLGLDGII 240
>gi|300691361|ref|YP_003752356.1| dihydroorotate dehydrogenase [Ralstonia solanacearum PSI07]
gi|299078421|emb|CBJ51073.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum PSI07]
Length = 344
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVVLKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 232 QIANIADALL--RHRMDGVIATNTTIRREAVAGLPHAEEAGGLSGQPVREGSTRVIRALR 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 290 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 342
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVVLKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 232 QIANIADALL 241
>gi|387119889|ref|YP_006285772.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|416039642|ref|ZP_11574368.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416046471|ref|ZP_11575718.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416072153|ref|ZP_11584087.1| dihydroorotate dehydrogenase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|429732528|ref|ZP_19267137.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans Y4]
gi|347994288|gb|EGY35586.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347994627|gb|EGY35888.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347998023|gb|EGY38969.1| dihydroorotate dehydrogenase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|385874381|gb|AFI85940.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429155867|gb|EKX98513.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans Y4]
Length = 339
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 124/191 (64%), Gaps = 10/191 (5%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
SL++ KD + L+ K + A Y VN+SSPNT +LR+LQ D LL+++
Sbjct: 149 SLEQGKDDYLICLN------KAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKNR 202
Query: 171 RNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+ +LA + PI VKIAPDL+ E IAD +L + K+DG+I +NTT+ R + +
Sbjct: 203 QKELAEQYQKYVPIAVKIAPDLTEAELVQIADTLL--RHKMDGVIATNTTISRDNVTNLK 260
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E+ GGLSG+PL++KST +I+ +++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y
Sbjct: 261 NAEQRGGLSGKPLQHKSTAIIARLHRELKGQIPIIGSGGIDGVQNAQEKIRAGAELLQVY 320
Query: 289 TSFVYHGPPLV 299
+ +YHGP LV
Sbjct: 321 SGLIYHGPKLV 331
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K + A Y VN+SSPNT +LR+LQ D LL+++ + +LA + PI
Sbjct: 157 YLICLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKNRQKELAEQYQKYVPI 216
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL+ E IAD +L
Sbjct: 217 AVKIAPDLTEAELVQIADTLL 237
>gi|372279931|ref|ZP_09515967.1| dihydroorotate dehydrogenase 2 [Oceanicola sp. S124]
Length = 162
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 114/164 (69%), Gaps = 5/164 (3%)
Query: 164 LKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYE 223
++ V+ TR+ LA + P+ +KIAPDL + DIA+V L K+DG+I +NTT+DR E
Sbjct: 1 MEGVLATRDGLARRV--PVFLKIAPDLDAEGLSDIAEVAL--ALKLDGVIATNTTLDR-E 55
Query: 224 YLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGAS 283
L + ++ ETGGLSG PL +ST +++ + +LT G LP+IGVGGV S + A++KI+AGAS
Sbjct: 56 GLASAHRGETGGLSGAPLFERSTRVLARLSQLTGGALPLIGVGGVASAEQAYQKIRAGAS 115
Query: 284 LVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
VQ+Y++ VY G LV RI L+ LL ++G+ SV++AVG +
Sbjct: 116 AVQLYSALVYEGLSLVPRIAEGLDALLARDGFASVAEAVGTGRE 159
>gi|429091961|ref|ZP_19154611.1| Dihydroorotate dehydrogenase [Cronobacter dublinensis 1210]
gi|426743384|emb|CCJ80724.1| Dihydroorotate dehydrogenase [Cronobacter dublinensis 1210]
Length = 336
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + L+ K P+ VKIAPDLS++
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLGAIKNQQQLLSQKHHKYVPVAVKIAPDLSIE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR ++ +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKHCDETGGLSGRPLQLKSTEIIRLLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EK+ AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKMAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLGAIKNQQQLLSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS++E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSIEELIQVADSLVRHNIDGVI 243
>gi|448611444|ref|ZP_21662078.1| dihydroorotate dehydrogenase 2 [Haloferax mucosum ATCC BAA-1512]
gi|445743876|gb|ELZ95357.1| dihydroorotate dehydrogenase 2 [Haloferax mucosum ATCC BAA-1512]
Length = 351
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 11/193 (5%)
Query: 131 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDL 190
+ D A YFVVNVS PN+ R LQ +D L+ +L T+V+ P+LVK++PDL
Sbjct: 167 RVADGADYFVVNVSCPNSEGFRDLQNRDSLEAILGTLVDAGAN-------PLLVKLSPDL 219
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELIS 250
++ DVV D +DG+I SNTT R + L + E GGLSG+P+ + +T++I
Sbjct: 220 PDPAVEEALDVVND--LDLDGIIASNTTTSRPDSLQNPNQAERGGLSGKPIESAATDMIR 277
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
+ + T PI+GVGGV + A+ KI+AGAS+VQ+YT VY GP + I L E L
Sbjct: 278 FIAERTDA--PIVGVGGVSDAESAYRKIRAGASIVQLYTGMVYEGPAIARNINRGLVERL 335
Query: 311 QKEGYNSVSQAVG 323
+++G++SV+ AVG
Sbjct: 336 ERDGFDSVADAVG 348
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 51 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDL 110
+ D A YFVVNVS PN+ R LQ +D L+ +L T+V+ P+LVK++PDL
Sbjct: 167 RVADGADYFVVNVSCPNSEGFRDLQNRDSLEAILGTLVDAGAN-------PLLVKLSPDL 219
Query: 111 SLDEKKDIADVVLD-SVKGIL 130
++ DVV D + GI+
Sbjct: 220 PDPAVEEALDVVNDLDLDGII 240
>gi|197122969|ref|YP_002134920.1| dihydroorotate dehydrogenase 2 [Anaeromyxobacter sp. K]
gi|226710745|sp|B4UG99.1|PYRD_ANASK RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|196172818|gb|ACG73791.1| Dihydroorotate oxidase [Anaeromyxobacter sp. K]
Length = 364
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D D + I + A Y VVN+SSPNT LR+LQ +D L LL+ V R+ P
Sbjct: 153 DAAADYLACIERLHPYADYLVVNISSPNTPGLRQLQERDALDRLLRACV--RHLAERAPG 210
Query: 180 PPILVKIAPDLS---LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGL 236
P+LVK+APDLS LDE D+A + +S V+R+ E GGL
Sbjct: 211 KPLLVKLAPDLSPEALDEAVDVAIAAGAAGIVATNTTLSRAGVERHPR-----AAEAGGL 265
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG PL +T+++ Y G++PI+GVGGV + A+ KI+AGA+LVQ YT +Y GP
Sbjct: 266 SGAPLERLATDVVRRCYARAAGRVPIVGVGGVMDAEGAYAKIRAGATLVQAYTGLIYGGP 325
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
V R+ + L LL+++ ++++S A+GA H+
Sbjct: 326 GFVGRVNAGLARLLERDEFSTLSDAIGADHR 356
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L I + A Y VVN+SSPNT LR+LQ +D L LL+ V R+ P P+LV
Sbjct: 158 YLACIERLHPYADYLVVNISSPNTPGLRQLQERDALDRLLRACV--RHLAERAPGKPLLV 215
Query: 105 KIAPDLS---LDE 114
K+APDLS LDE
Sbjct: 216 KLAPDLSPEALDE 228
>gi|94310158|ref|YP_583368.1| dihydroorotate dehydrogenase 2 [Cupriavidus metallidurans CH34]
gi|93354010|gb|ABF08099.1| dihydroorotate dehydrogenase [Cupriavidus metallidurans CH34]
Length = 358
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 186 ASYVTVNISSPNTKNLRQLQGASELDSLLSTLKAAQQRLADQHKRYVPVALKIAPDLDDD 245
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++I D ++ + K+DG+I +NTT+ R + EE GGLSG P+ ST ++ +
Sbjct: 246 QVRNIGDALV--RHKIDGVIATNTTISRDAVKGLPHAEEAGGLSGRPVFEASTRVVRALR 303
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
++ LPIIGVGG+FSG DA KI AGA LVQ+Y+ +Y GP LV S L
Sbjct: 304 EVIGDALPIIGVGGIFSGADARAKIDAGAQLVQVYSGLIYRGPTLVRECASALRR 358
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 186 ASYVTVNISSPNTKNLRQLQGASELDSLLSTLKAAQQRLADQHKRYVPVALKIAPDLDDD 245
Query: 114 EKKDIADVVL 123
+ ++I D ++
Sbjct: 246 QVRNIGDALV 255
>gi|262165697|ref|ZP_06033434.1| dihydroorotate dehydrogenase [Vibrio mimicus VM223]
gi|262025413|gb|EEY44081.1| dihydroorotate dehydrogenase [Vibrio mimicus VM223]
Length = 287
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL + + +LA K P+ +KIAPDLS D
Sbjct: 117 AGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPLALKIAPDLSDD 176
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E K I +L K K+DG+I +NTT+DR ++ +ETGGLSG PL+ +STE+I +Y
Sbjct: 177 EIKQICQSLL--KNKIDGVIATNTTLDRSLVEGMKFADETGGLSGRPLQTRSTEVIKSLY 234
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
K ++PIIGVGGV S A EK+ AGA LVQ+Y+ F+Y GP LV I L
Sbjct: 235 KELGDEVPIIGVGGVDSYISAKEKLMAGAKLVQVYSGFIYQGPRLVADIVKNL 287
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 106 YLICMDKVYPYAGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPL 165
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+KIAPDLS DE K I +L + + G++
Sbjct: 166 ALKIAPDLSDDEIKQICQSLLKNKIDGVI 194
>gi|406946757|gb|EKD77860.1| dihydroorotate dehydrogenase 2 [uncultured bacterium]
Length = 332
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 6/170 (3%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV---KPLPPILVKIAPDLSL 192
A Y VVN+SSPNT LR+LQ++ LK+LL+ + +T+ A + LP +LVK DL
Sbjct: 161 ADYIVVNISSPNTPGLRELQSEHYLKNLLQGLQQTKKNAAGIFDRDLP-LLVKTTVDLPE 219
Query: 193 DEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEM 252
+ ++D C++DGL++SNTTVD D R+ E+GGLSG+PL +ST++I ++
Sbjct: 220 ENYAPFVQTIMD--CEIDGLVISNTTVDHSSVSDYRHGNESGGLSGQPLLERSTKMIRKL 277
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
++++ KLPIIGVGG+ SG+DA +AGA L Q++T FVY GP L+ I
Sbjct: 278 TEISEKKLPIIGVGGILSGQDAVTYQQAGAQLFQLFTGFVYRGPKLIGEI 327
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 25 TPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLL 84
TP N L + Q L + + D Y VVN+SSPNT LR+LQ++ LK+LL
Sbjct: 141 TPLENALDDY--------QICLKAVYPYAD---YIVVNISSPNTPGLRELQSEHYLKNLL 189
Query: 85 KTVVETRNQLA--LKPLPPILVKIAPDLSLDEKKDIADVVLD 124
+ + +T+ A P+LVK DL + ++D
Sbjct: 190 QGLQQTKKNAAGIFDRDLPLLVKTTVDLPEENYAPFVQTIMD 231
>gi|307729489|ref|YP_003906713.1| dihydroorotate dehydrogenase [Burkholderia sp. CCGE1003]
gi|307584024|gb|ADN57422.1| dihydroorotate dehydrogenase [Burkholderia sp. CCGE1003]
Length = 325
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 109/166 (65%), Gaps = 4/166 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ D+L LL + + + +LA L P+ +KIAPDL +
Sbjct: 154 ASYVTVNISSPNTKNLRQLQGADELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 213
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ + IAD +L + + +G+I +NTT+ R +Y +E GGLSG+P+ + S E+I ++
Sbjct: 214 QIRSIADTLL--RHRFEGVIATNTTLSRTAVAGMQYGDEAGGLSGKPVFDASNEVIRKLR 271
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
+PIIGVGG+FSG DA K+ AGASLVQ+YT F+Y GP L+
Sbjct: 272 AEVGETVPIIGVGGIFSGDDARAKLAAGASLVQLYTGFIYRGPALI 317
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ D+L LL + + + +LA L P+ +KIAPDL +
Sbjct: 154 ASYVTVNISSPNTKNLRQLQGADELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 213
Query: 114 EKKDIADVVL 123
+ + IAD +L
Sbjct: 214 QIRSIADTLL 223
>gi|359143832|ref|ZP_09178047.1| dihydroorotate dehydrogenase 2 [Streptomyces sp. S4]
Length = 370
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 125/210 (59%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D V + A Y VVNVSSPNT LR LQA L+ LL V E ++
Sbjct: 156 AEAVADYVTSTERLAAHADYLVVNVSSPNTPGLRDLQAVGHLRPLLTAVREAADRSVPGR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL----DARYKEETG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L D ETG
Sbjct: 216 RVPLLVKIAPDLADEDIDAVADLAVE--LGLDGIIATNTTIAR-EGLGLTADPALAAETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++ +Y +L ++GVGGV + +DA+ +I AGA+LVQ Y++F+Y
Sbjct: 273 GLSGAPLKARSLEVLRRLYARVGDRLTLVGVGGVETAEDAWRRILAGATLVQGYSAFIYT 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP + L ELL + ++++AVGA
Sbjct: 333 GPGYARAVHRGLAELLADSPHATLAEAVGA 362
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRDLQAVGHLRPLLTAVREAADRSVPGRRVPLLVKIAPDLADEDI 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|418575069|ref|ZP_13139226.1| dihydroorotate dehydrogenase 2 [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379326524|gb|EHY93645.1| dihydroorotate dehydrogenase 2 [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 355
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 122/200 (61%), Gaps = 6/200 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +K I F + +F VN+SSPNT NL+ KD+ L + + +++ ++ PI
Sbjct: 158 DYIKVIDTFKNDVTFFTVNISSPNTENLQSFHDKDEFSQLCEAIQTYKHKESLNV--PIF 215
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+K+ DLSLD + ++ DG+I++NTT R E L + ++EETGGLSG+PL
Sbjct: 216 IKLTSDLSLD---GLGAMLTPITQTFDGIILANTTQQR-EALHSNHREETGGLSGKPLFE 271
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
++ +LIS YK T G+ IIG GG+F+ +D ++ GASLVQIY++ V+ GP L ++
Sbjct: 272 RNLKLISYAYKQTDGQFLIIGTGGIFNAEDVIRMMRQGASLVQIYSALVFEGPGLTQKLN 331
Query: 304 SELEELLQKEGYNSVSQAVG 323
+L L+ GYN+V++ +G
Sbjct: 332 KQLAHYLKSNGYNNVNEIIG 351
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
F + +F VN+SSPNT NL+ KD+ L + + +++ +L PI +K+ DLS
Sbjct: 166 FKNDVTFFTVNISSPNTENLQSFHDKDEFSQLCEAIQTYKHKESLN--VPIFIKLTSDLS 223
Query: 112 LDEKKDIADVVLDSVKGIL 130
LD + + + GI+
Sbjct: 224 LDGLGAMLTPITQTFDGII 242
>gi|359688896|ref|ZP_09258897.1| dihydroorotate dehydrogenase 2 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748063|ref|ZP_13304355.1| dihydroorotate dehydrogenase (fumarate) [Leptospira licerasiae str.
MMD4847]
gi|418756720|ref|ZP_13312908.1| dihydroorotate dehydrogenase (fumarate) [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384116391|gb|EIE02648.1| dihydroorotate dehydrogenase (fumarate) [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404275132|gb|EJZ42446.1| dihydroorotate dehydrogenase (fumarate) [Leptospira licerasiae str.
MMD4847]
Length = 365
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D V + K A Y V+N+SSPNT LR Q K+ L+ + R+ L K
Sbjct: 163 NAVEDYVYSLKKLTSYADYAVINISSPNTPGLRNFQKKENFTKLMDGI---RSGLGGKFP 219
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK--EETGGLS 237
P VK APD+ +E K + +++ DSK + G+I++NTT+D+ + +RY E+ GG+S
Sbjct: 220 IPTFVKFAPDMEKEELKTLLELLPDSK--LSGVILTNTTIDKS--VLSRYPNVEKEGGVS 275
Query: 238 GEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPP 297
G+PLR +STE + Y + KG LPIIGVGG+ SG+ A EKI AGA L+Q+YT +VY+GP
Sbjct: 276 GKPLRQRSTEFVRYAYSILKGSLPIIGVGGINSGEAALEKILAGADLIQLYTGYVYNGPF 335
Query: 298 LVTRIKSELEELLQKEGYNSVSQAVG 323
L RI L+ +L++ G S+S VG
Sbjct: 336 LPVRILEYLDGVLKQTGARSISDLVG 361
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q K+ L+ + R+ L K P V
Sbjct: 168 YVYSLKKLTSYADYAVINISSPNTPGLRNFQKKENFTKLMDGI---RSGLGGKFPIPTFV 224
Query: 105 KIAPDL 110
K APD+
Sbjct: 225 KFAPDM 230
>gi|410637013|ref|ZP_11347601.1| dihydroorotate dehydrogenase [Glaciecola lipolytica E3]
gi|410143392|dbj|GAC14806.1| dihydroorotate dehydrogenase [Glaciecola lipolytica E3]
Length = 336
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 114 EKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQ 173
E+++ D L +K + + D Y VN+SSPNT LR LQ + L LL + + Q
Sbjct: 146 EEQNALDDYLICLKKVYAYAD---YVTVNISSPNTPGLRSLQYGEALDKLLLGLKAEQKQ 202
Query: 174 LAV--KPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE 231
LA P++VKIAPDL+ E KDIA+ +L K ++DG+I +NTT+DR RY +
Sbjct: 203 LAQIHGKYVPLVVKIAPDLTDKEIKDIANSLL--KTEIDGVIATNTTLDRSSVEGLRYAK 260
Query: 232 ETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSF 291
E GGLSGE L KS + + + +G +PIIGVGG+ S A +++ AGA+LVQIY+SF
Sbjct: 261 EAGGLSGEVLTAKSLHVTKVLAEALQGAMPIIGVGGIHSSATANDRLNAGATLVQIYSSF 320
Query: 292 VYHGPPLVTRI 302
+Y GPPL+ +I
Sbjct: 321 IYQGPPLIKQI 331
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAL--KPLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + + QLA P+
Sbjct: 154 YLICLKKVYAYADYVTVNISSPNTPGLRSLQYGEALDKLLLGLKAEQKQLAQIHGKYVPL 213
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
+VKIAPDL+ E KDIA+ +L + + G++
Sbjct: 214 VVKIAPDLTDKEIKDIANSLLKTEIDGVI 242
>gi|254383573|ref|ZP_04998923.1| dihydroorotate dehydrogenase [Streptomyces sp. Mg1]
gi|194342468|gb|EDX23434.1| dihydroorotate dehydrogenase [Streptomyces sp. Mg1]
Length = 357
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D V + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 145 EAVGDYVASTERLARHADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTDRR 204
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL----DARYKEETGG 235
P+LVKIAPDL+ ++ +AD+ L+ +DG+I +NTT+ R E L D +ETGG
Sbjct: 205 VPLLVKIAPDLADEDVDAVADLALE--LGLDGIIATNTTIAR-EGLGLKSDPSLVKETGG 261
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG P++ +S E++ +Y +L ++GVGGV + +DA+++I AGASLVQ Y++F+Y G
Sbjct: 262 LSGAPVKERSLEVLRRLYARVGDRLVLVGVGGVENAEDAWQRILAGASLVQGYSAFIYEG 321
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P I L L Y ++++AVGA
Sbjct: 322 PFYARAIHKGLAARLADSPYATLAEAVGA 350
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 161 ADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTDRRVPLLVKIAPDLADEDV 220
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ L+ + GI+
Sbjct: 221 DAVADLALELGLDGII 236
>gi|448302626|ref|ZP_21492600.1| dihydroorotate dehydrogenase 2 [Natronorubrum sulfidifaciens JCM
14089]
gi|445595468|gb|ELY49575.1| dihydroorotate dehydrogenase 2 [Natronorubrum sulfidifaciens JCM
14089]
Length = 356
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 154/294 (52%), Gaps = 27/294 (9%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQA-------KDQLKHLLKTVVETRNQ 93
L+ G ++ G V Y P LR+ +A Q +K+ +ET
Sbjct: 79 ALEALGFGFVEIGTVTPYPQSGNDRPRLFRLREDEAMINRMGFNGQGMERVKSRLETDG- 137
Query: 94 LALKPLPPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANL 151
P P+ V I S E + I D V D + A Y VVNVS PNT
Sbjct: 138 ---TPGFPLGVNIGKMNSSSESEAIEDYRRVFD------RLSPFADYVVVNVSCPNTPEE 188
Query: 152 RKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDG 211
+ + L+ + + ++E N A KP ILVKI PD D D+ D+V + +DG
Sbjct: 189 FDEGSPEHLRAIFE-MLEAEND-ADKP---ILVKIGPDSPDDSILDLVDIV--QEFGLDG 241
Query: 212 LIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
++ +NT+ R + L++ +EE GGLSG+P+ ++ST +I + + T G +PIIGVGGV S
Sbjct: 242 IVATNTSTTR-DGLESPNQEEWGGLSGKPVEDRSTAVIRTIAEYTDGDVPIIGVGGVDSA 300
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAA 325
A+EKI+AGASLV++YT FVY GP RI L ELL+++G+ S+ AVGA
Sbjct: 301 GAAYEKIRAGASLVELYTGFVYEGPSTAKRINQGLVELLERDGFASIEDAVGAG 354
>gi|444377361|ref|ZP_21176592.1| Dihydroorotate dehydrogenase [Enterovibrio sp. AK16]
gi|443678442|gb|ELT85111.1| Dihydroorotate dehydrogenase [Enterovibrio sp. AK16]
Length = 287
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 129/224 (57%), Gaps = 10/224 (4%)
Query: 81 KHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFV 140
H + +VE + + + I + D L+ KD + +D V D A Y
Sbjct: 68 NHGVDALVENVKKAKYEGIIGINIGKNKDTPLENGKDDYLICMDKVY------DHAGYIA 121
Query: 141 VNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLDEKKDI 198
VN+SSPNT LR LQ + L LL ++ E +N+LA + P+ +KIAPD++ DE +
Sbjct: 122 VNISSPNTPGLRSLQYGEALDDLLSSLKERQNKLAEEKGKYVPLALKIAPDMTEDELVQV 181
Query: 199 ADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKG 258
AD ++ + +DG+I +NTT+DR + E GGLSG P++NKSTE+I + G
Sbjct: 182 ADSLV--RHGIDGVIATNTTLDRSLVEGMPHAHEAGGLSGRPVQNKSTEVIRRLNLELNG 239
Query: 259 KLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
KLPIIGVGG+ S A EK+ AGA LVQ+Y+ F+YHGP LV I
Sbjct: 240 KLPIIGVGGIDSVMAAKEKMMAGAELVQVYSGFIYHGPRLVKDI 283
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K D A Y VN+SSPNT LR LQ + L LL ++ E +N+LA + P+
Sbjct: 106 YLICMDKVYDHAGYIAVNISSPNTPGLRSLQYGEALDDLLSSLKERQNKLAEEKGKYVPL 165
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
+KIAPD++ DE +AD +V + G++
Sbjct: 166 ALKIAPDMTEDELVQVADSLVRHGIDGVI 194
>gi|429090242|ref|ZP_19152974.1| Dihydroorotate dehydrogenase [Cronobacter universalis NCTC 9529]
gi|426510045|emb|CCK18086.1| Dihydroorotate dehydrogenase [Cronobacter universalis NCTC 9529]
Length = 336
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + L+ K P+ VKIAPDLS +
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQALSQKHHKYVPVAVKIAPDLSPE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR + +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKNCDETGGLSGRPLQLKSTEIIRRLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGASL+QIY+ F++ GPPLV I + L
Sbjct: 284 QELQGRLPIIGVGGIDSVIAAREKIAAGASLIQIYSGFIFKGPPLVKEIVTHL 336
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + L+ K P+
Sbjct: 155 YLICMEKVFPYAGYIAINISSPNTPGLRSLQYGDALDDLLAAIKNQQQALSQKHHKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS +E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSPEELIQVADSLVRHNIDGVI 243
>gi|347540702|ref|YP_004848127.1| dihydroorotate dehydrogenase 2 [Pseudogulbenkiania sp. NH8B]
gi|345643880|dbj|BAK77713.1| dihydroorotate dehydrogenase 2 [Pseudogulbenkiania sp. NH8B]
Length = 346
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLDEK 195
Y VN+SSPNT NLR+LQ D+L LL ++ + +LA K P+ VKIAPDL D +
Sbjct: 168 YITVNISSPNTKNLRQLQQADELSALLASLKVRQQELADKHGRYVPLAVKIAPDL--DNE 225
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKL 255
+ +A L + K+DG+I +NTT+ R E +E GGLSG P+R +ST LI ++ K
Sbjct: 226 QIVAIARLLTGHKIDGVIATNTTLSRSEIAGHPMADEAGGLSGAPVRERSTALIRKLAKE 285
Query: 256 TKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
G LPIIGVGG+ SG+DA EK+ AGA+LVQ+Y+ +Y GP LV + L+
Sbjct: 286 LDGALPIIGVGGIDSGEDAAEKMDAGATLVQLYSGLIYRGPDLVGEVLQALK 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLDEK 115
Y VN+SSPNT NLR+LQ D+L LL ++ + +LA K P+ VKIAPDL ++
Sbjct: 168 YITVNISSPNTKNLRQLQQADELSALLASLKVRQQELADKHGRYVPLAVKIAPDLDNEQI 227
Query: 116 KDIA 119
IA
Sbjct: 228 VAIA 231
>gi|239986407|ref|ZP_04707071.1| dihydroorotate dehydrogenase 2 [Streptomyces roseosporus NRRL
11379]
gi|291443353|ref|ZP_06582743.1| dihydroorotate dehydrogenase 2 [Streptomyces roseosporus NRRL
15998]
gi|291346300|gb|EFE73204.1| dihydroorotate dehydrogenase 2 [Streptomyces roseosporus NRRL
15998]
Length = 370
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 126/210 (60%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 156 AEAAADYVKSTERLAAHADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE----TG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L + E TG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-EGLGLKSGPELLGETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++S +Y ++ ++GVGG+ + +DA+++I AGA+LVQ Y++F+Y
Sbjct: 273 GLSGAPLKARSLEVLSRLYARVGDRITLVGVGGIENAEDAWQRILAGATLVQGYSAFIYE 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP I L L Y ++++AVGA
Sbjct: 333 GPFYARAIHKGLAARLATSPYATLAEAVGA 362
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|182439845|ref|YP_001827564.1| dihydroorotate dehydrogenase 2 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326780509|ref|ZP_08239774.1| Dihydroorotate dehydrogenase [Streptomyces griseus XylebKG-1]
gi|226710788|sp|B1W464.1|PYRD_STRGG RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|178468361|dbj|BAG22881.1| putative dihydroorotate dehydrogenase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326660842|gb|EGE45688.1| Dihydroorotate dehydrogenase [Streptomyces griseus XylebKG-1]
Length = 370
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 157 EAAADYVKSTERLAAHADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTRR 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE----ETGG 235
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTTV R E L + E GG
Sbjct: 217 VPLLVKIAPDLADEDVDAVADLAVE--LGLDGVIATNTTVAR-EGLGLKSHPDLVGEAGG 273
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+++S E++S +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y G
Sbjct: 274 LSGAPLKDRSLEVLSRLYARVGDRITLVGVGGVENAEDAWQRILAGATLVQGYSAFIYEG 333
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P I L L Y ++++AVGA
Sbjct: 334 PAYARAIHQGLAARLAASPYATLAEAVGA 362
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD 124
+AD+ ++
Sbjct: 233 DAVADLAVE 241
>gi|387769588|ref|ZP_10125851.1| dihydroorotate oxidase [Pasteurella bettyae CCUG 2042]
gi|386906897|gb|EIJ71622.1| dihydroorotate oxidase [Pasteurella bettyae CCUG 2042]
Length = 340
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 109/168 (64%), Gaps = 4/168 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLS 191
+ A Y +N+SSPNT LR+LQ D L LLK++ E + LA PI VKIAPD +
Sbjct: 167 NYADYITINISSPNTPGLRQLQYGDALDDLLKSIKERQAYLANVYNKYVPITVKIAPDQT 226
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
+E IAD + + K+DG+I +NTT+ R + E+ GGLSG+PL+NKSTE+I
Sbjct: 227 EEELVQIADTL--RRHKMDGVIATNTTISRDTVVGMENSEQIGGLSGKPLQNKSTEIIRR 284
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
+Y+ KG++PIIG GG+ +A EKI AGA L+Q+Y+ +YHGP LV
Sbjct: 285 LYQELKGEIPIIGSGGIDGVPNAKEKIAAGAELLQVYSGLIYHGPTLV 332
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ + K + A Y +N+SSPNT LR+LQ D L LLK++ E + LA PI
Sbjct: 158 YIFCLNKAYNYADYITINISSPNTPGLRQLQYGDALDDLLKSIKERQAYLANVYNKYVPI 217
Query: 103 LVKIAPDLSLDEKKDIADVV 122
VKIAPD + +E IAD +
Sbjct: 218 TVKIAPDQTEEELVQIADTL 237
>gi|399576431|ref|ZP_10770188.1| hypothetical protein HSB1_22270 [Halogranum salarium B-1]
gi|399239142|gb|EJN60069.1| hypothetical protein HSB1_22270 [Halogranum salarium B-1]
Length = 351
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 119/193 (61%), Gaps = 11/193 (5%)
Query: 131 KFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDL 190
+ D YFVVNVSSPNT LR LQ ++ L+ + T+ + P+LVK++PDL
Sbjct: 167 RVADAGDYFVVNVSSPNTPGLRSLQNRESLEQIFGTLQDAGAS-------PLLVKLSPDL 219
Query: 191 SLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELIS 250
S +D VV D +DG+I +NTT +R + L + K E GGLSG+P+ ++T ++
Sbjct: 220 SEGAIEDALAVVDD--LGLDGVIATNTTTERPDSLQSPEKAERGGLSGKPIEERATGMVR 277
Query: 251 EMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELL 310
+ + T +PI+GVGG+ + A+ KI+AGAS+VQ+YT VY GP L I L +LL
Sbjct: 278 FIAERTD--VPIVGVGGITDAEGAYAKIRAGASVVQLYTGLVYEGPGLARDINEGLLDLL 335
Query: 311 QKEGYNSVSQAVG 323
+++G++SV AVG
Sbjct: 336 ERDGFDSVEDAVG 348
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
+L + D YFVVNVSSPNT LR LQ ++ L+ + T+ + P+LV
Sbjct: 161 YLYTYERVADAGDYFVVNVSSPNTPGLRSLQNRESLEQIFGTLQDAGAS-------PLLV 213
Query: 105 KIAPDLSLDEKKDIADVVLD 124
K++PDLS +D VV D
Sbjct: 214 KLSPDLSEGAIEDALAVVDD 233
>gi|152979051|ref|YP_001344680.1| dihydroorotate dehydrogenase 2 [Actinobacillus succinogenes 130Z]
gi|171704359|sp|A6VP48.1|PYRD_ACTSZ RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|150840774|gb|ABR74745.1| Dihydroorotate oxidase [Actinobacillus succinogenes 130Z]
Length = 340
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 109/168 (64%), Gaps = 4/168 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLS 191
+ AHY VN+SSPNT +LR LQ D L LLK++ E + LA PI +KIAPDL+
Sbjct: 167 NYAHYITVNISSPNTPDLRTLQYGDALDDLLKSIKERQKILAEQYNKYVPIALKIAPDLT 226
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
E IAD V + ++DG+I +NTT+ R + E GGLSG+PL++KSTE+I
Sbjct: 227 EAELVQIADTV--RRHQMDGVIATNTTISRDTVQGMKNAAEIGGLSGKPLQHKSTEIIRR 284
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
+++ KG +PIIG GG+ ++A EKI AGA L+QIY+ +YHGP LV
Sbjct: 285 LHRELKGDIPIIGSGGIDGVQNAQEKIAAGAELLQIYSGLIYHGPALV 332
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ + K + AHY VN+SSPNT +LR LQ D L LLK++ E + LA PI
Sbjct: 158 YIFCLNKAYNYAHYITVNISSPNTPDLRTLQYGDALDDLLKSIKERQKILAEQYNKYVPI 217
Query: 103 LVKIAPDLSLDEKKDIADVV 122
+KIAPDL+ E IAD V
Sbjct: 218 ALKIAPDLTEAELVQIADTV 237
>gi|189038568|sp|Q1LP27.2|PYRD_RALME RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
Length = 344
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLSTLKAAQQRLADQHKRYVPVALKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++I D ++ + K+DG+I +NTT+ R + EE GGLSG P+ ST ++ +
Sbjct: 232 QVRNIGDALV--RHKIDGVIATNTTISRDAVKGLPHAEEAGGLSGRPVFEASTRVVRALR 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
++ LPIIGVGG+FSG DA KI AGA LVQ+Y+ +Y GP LV S L
Sbjct: 290 EVIGDALPIIGVGGIFSGADARAKIDAGAQLVQVYSGLIYRGPTLVRECASALRR 344
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLSTLKAAQQRLADQHKRYVPVALKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ ++I D ++
Sbjct: 232 QVRNIGDALV 241
>gi|407713557|ref|YP_006834122.1| dihydroorotate dehydrogenase [Burkholderia phenoliruptrix BR3459a]
gi|407235741|gb|AFT85940.1| dihydroorotate dehydrogenase [Burkholderia phenoliruptrix BR3459a]
Length = 325
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL + + + +LA L P+ +KIAPDL +
Sbjct: 154 ASYVTVNISSPNTKNLRQLQGAGELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 213
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ K IAD +L + + +G+I +NTT+ R +Y +E GGLSG+P+ + S E+I ++
Sbjct: 214 QIKSIADTLL--RHRFEGVIATNTTLSRTAVTGMQYGDEAGGLSGKPVFDASNEVIRKLR 271
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+PIIGVGG+FSG DA KI AGASLVQ+YT F+Y GP L++ L
Sbjct: 272 AEVGETVPIIGVGGIFSGDDARAKIAAGASLVQLYTGFIYRGPALISECVGALR 325
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL + + + +LA L P+ +KIAPDL +
Sbjct: 154 ASYVTVNISSPNTKNLRQLQGAGELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 213
Query: 114 EKKDIADVVL 123
+ K IAD +L
Sbjct: 214 QIKSIADTLL 223
>gi|390943127|ref|YP_006406888.1| dihydroorotate oxidase A [Belliella baltica DSM 15883]
gi|390416555|gb|AFL84133.1| dihydroorotate oxidase A [Belliella baltica DSM 15883]
Length = 347
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 115/179 (64%), Gaps = 7/179 (3%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKD 197
YFVVNVSSPNT NLR LQ K+ LK LL V E ++ L PIL+KIAPDL+ + D
Sbjct: 173 YFVVNVSSPNTPNLRDLQEKEPLKRLLLAVKEANDKKG--KLKPILLKIAPDLTDGQLDD 230
Query: 198 IADVVLDSKCKVDGLIVSNTTVDRYEY-LDARYKEE--TGGLSGEPLRNKSTELISEMYK 254
I ++V + K+DG+I +NTT+DR DA E GG+SG+ L +STE+I +
Sbjct: 231 IVEIV--QETKIDGVIATNTTIDRSGLKTDASQVESIGAGGVSGKVLGTRSTEVIRYLAD 288
Query: 255 LTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKE 313
+ PIIGVGG+F+ +DA EK++AGASL+Q+Y+ +Y GP ++ +IK L Q +
Sbjct: 289 KSNRSFPIIGVGGIFTTQDAIEKLEAGASLIQVYSGMIYEGPGMIKKIKKGLLSHFQNQ 347
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEKKD 117
YFVVNVSSPNT NLR LQ K+ LK LL V E ++ L PIL+KIAPDL+ + D
Sbjct: 173 YFVVNVSSPNTPNLRDLQEKEPLKRLLLAVKEANDKKG--KLKPILLKIAPDLTDGQLDD 230
Query: 118 IADVVLDS 125
I ++V ++
Sbjct: 231 IVEIVQET 238
>gi|323526239|ref|YP_004228392.1| dihydroorotate dehydrogenase [Burkholderia sp. CCGE1001]
gi|323383241|gb|ADX55332.1| dihydroorotate dehydrogenase [Burkholderia sp. CCGE1001]
Length = 340
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 109/167 (65%), Gaps = 4/167 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL + + + +LA L P+ +KIAPDL +
Sbjct: 169 ASYVTVNISSPNTKNLRQLQGAGELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 228
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ K IAD +L + + +G+I +NTT+ R +Y +E GGLSG+P+ + S E+I ++
Sbjct: 229 QVKSIADTLL--RHRFEGVIATNTTLSRTAVAGMQYGDEAGGLSGKPVFDASNEVIRKLR 286
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
+PIIGVGG+FSG DA KI AGASLVQ+YT F+Y GP L++
Sbjct: 287 AEVGETVPIIGVGGIFSGDDARAKIAAGASLVQLYTGFIYRGPALIS 333
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL + + + +LA L P+ +KIAPDL +
Sbjct: 169 ASYVTVNISSPNTKNLRQLQGAGELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 228
Query: 114 EKKDIADVVL 123
+ K IAD +L
Sbjct: 229 QVKSIADTLL 238
>gi|145629508|ref|ZP_01785306.1| dihydroorotate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145639002|ref|ZP_01794610.1| dihydroorotate dehydrogenase [Haemophilus influenzae PittII]
gi|144978351|gb|EDJ88115.1| dihydroorotate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145271974|gb|EDK11883.1| dihydroorotate dehydrogenase [Haemophilus influenzae PittII]
gi|309750962|gb|ADO80946.1| Dihydroorotate dehydrogenase [Haemophilus influenzae R2866]
Length = 339
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 10/194 (5%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
SL++ KD D + + K + A Y VN+SSPNT +LR+LQ D LL+++ +
Sbjct: 149 SLEQGKD------DYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDR 202
Query: 171 RNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+ LA PI+VKIAPDL+ E IAD ++ + K+DG+I +NTT+ R + +
Sbjct: 203 QAILANQYNKYVPIVVKIAPDLTESELVQIADTLV--RHKMDGVIATNTTISRDTVMGMK 260
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E+ GGLSG+PL++KSTE+I +++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y
Sbjct: 261 NAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVY 320
Query: 289 TSFVYHGPPLVTRI 302
+ +YHGP LV +
Sbjct: 321 SGLIYHGPKLVKEL 334
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ + K + A Y VN+SSPNT +LR+LQ D LL+++ + + LA PI
Sbjct: 157 YIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPI 216
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+VKIAPDL+ E IAD ++
Sbjct: 217 VVKIAPDLTESELVQIADTLV 237
>gi|91774861|ref|YP_544617.1| dihydroorotate dehydrogenase 2 [Methylobacillus flagellatus KT]
gi|123380603|sp|Q1H411.1|PYRD_METFK RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|91708848|gb|ABE48776.1| dihydroorotate oxidase A [Methylobacillus flagellatus KT]
Length = 337
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLD 193
AHY VN+SSPNT NLR LQ K+ L LL + + + LA + PI +KIAPDL
Sbjct: 166 AHYVTVNISSPNTKNLRALQEKEALGQLLHALKQEQQVLADQHGRYVPIALKIAPDLDEG 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ DIA +++ K + DG+I +NTT+ R +E GGLSG PLR++ST +I +
Sbjct: 226 QVADIAALLM--KHQFDGVIATNTTLARDMVQALPCAQEAGGLSGAPLRDRSTAVIQSLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
G LPIIGVGG+ SG+DA +KIKAGASLVQ+Y+ VY GP LV I L
Sbjct: 284 NHLAGALPIIGVGGILSGEDAEQKIKAGASLVQVYSGLVYRGPVLVDDICRTL 336
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLD 113
AHY VN+SSPNT NLR LQ K+ L LL + + + LA + PI +KIAPDL
Sbjct: 166 AHYVTVNISSPNTKNLRALQEKEALGQLLHALKQEQQVLADQHGRYVPIALKIAPDLDEG 225
Query: 114 EKKDIADVVL 123
+ DIA +++
Sbjct: 226 QVADIAALLM 235
>gi|409199820|ref|ZP_11228023.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas flavipulchra
JG1]
Length = 336
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--P 181
D + + K + A Y VN+SSPNT LR LQ + L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGEALDDLLQSLKNEQMDLIAKHNKSVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPD+ + IA+ +++++ +DG+I +NTT+ R + Y E GGLSG P+
Sbjct: 214 MLVKIAPDVDGVQLTQIAESLVNNR--IDGVIATNTTLARDAVDNLEYGNEAGGLSGRPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R KST ++SE+ ++T KLPIIGVGG+ S + A EK AGA LVQ+YT F+Y GP LV +
Sbjct: 272 REKSTHVVSELKRITDSKLPIIGVGGIDSAESAKEKFSAGADLVQVYTGFIYEGPALVKK 331
Query: 302 IKSEL 306
I S L
Sbjct: 332 IVSSL 336
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
A Y VN+SSPNT LR LQ + L LL+++ + L K P+LVKIAPD+
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGEALDDLLQSLKNEQMDLIAKHNKSVPMLVKIAPDVDGV 225
Query: 114 EKKDIAD-VVLDSVKGIL 130
+ IA+ +V + + G++
Sbjct: 226 QLTQIAESLVNNRIDGVI 243
>gi|423119546|ref|ZP_17107230.1| dihydroorotate dehydrogenase [Klebsiella oxytoca 10-5246]
gi|376398200|gb|EHT10827.1| dihydroorotate dehydrogenase [Klebsiella oxytoca 10-5246]
Length = 336
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ D L LL + + +L K P+ VKIAPDLSL+
Sbjct: 166 AGYIAINISSPNTPGLRTLQYGDALDDLLSGIKNKQLELQQKHQKYVPVAVKIAPDLSLE 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + +DG+I +NTT+DR ++ +ETGGLSG PL+ KSTE+I +
Sbjct: 226 ELIQVADSLV--RHNIDGVIATNTTLDRSLVQGMKFCDETGGLSGRPLQLKSTEIIRMLA 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
G+LPIIGVGG+ S A EKI AGASLVQIY+ F++ GPPL+ I + +
Sbjct: 284 TELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI 336
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ D L LL + + +L K P+
Sbjct: 155 YLICMEKVYPYAGYIAINISSPNTPGLRTLQYGDALDDLLSGIKNKQLELQQKHQKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLSL+E +AD +V ++ G++
Sbjct: 215 AVKIAPDLSLEELIQVADSLVRHNIDGVI 243
>gi|258626752|ref|ZP_05721572.1| dihydroorotate dehydrogenase [Vibrio mimicus VM603]
gi|258580966|gb|EEW05895.1| dihydroorotate dehydrogenase [Vibrio mimicus VM603]
Length = 336
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL + + +LA K P+ +KIAPDLS D
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPLALKIAPDLSDD 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E K I +L K K+DG+I +NTT+DR ++ +ETGGLSG PL+ +STE+I +Y
Sbjct: 226 EIKQICQSLL--KNKIDGVIATNTTLDRSLVEGMKFADETGGLSGRPLQTRSTEVIKSLY 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
K ++PIIGVGGV S A EK+ AGA LVQ+Y+ F+Y GP LV I L
Sbjct: 284 KELGDEVPIIGVGGVDSYISAKEKLMAGAKLVQVYSGFIYQGPRLVADIVKNL 336
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYPYAGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPL 214
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+KIAPDLS DE K I +L + + G++
Sbjct: 215 ALKIAPDLSDDEIKQICQSLLKNKIDGVI 243
>gi|449144048|ref|ZP_21774866.1| Dihydroorotate dehydrogenase [Vibrio mimicus CAIM 602]
gi|449080372|gb|EMB51288.1| Dihydroorotate dehydrogenase [Vibrio mimicus CAIM 602]
Length = 336
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL + + +LA K P+ +KIAPDLS D
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPLALKIAPDLSDD 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E K I +L K K+DG+I +NTT+DR ++ +ETGGLSG PL+ +STE+I +Y
Sbjct: 226 EIKQICQSLL--KNKIDGVIATNTTLDRSLVEGMKFADETGGLSGRPLQTRSTEVIKSLY 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
K ++PIIGVGGV S A EK+ AGA LVQ+Y+ F+Y GP LV I L
Sbjct: 284 KELGDEVPIIGVGGVDSYISAKEKLMAGAKLVQVYSGFIYQGPRLVADIVKNL 336
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYPYAGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPL 214
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+KIAPDLS DE K I +L + + G++
Sbjct: 215 ALKIAPDLSDDEIKQICQSLLKNKIDGVI 243
>gi|326317565|ref|YP_004235237.1| dihydroorotate dehydrogenase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374401|gb|ADX46670.1| dihydroorotate dehydrogenase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 359
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 106/182 (58%), Gaps = 10/182 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--------PILVKIA 187
A Y VN+SSPNT NLR LQ+ L LL + E R LA P PI VKIA
Sbjct: 176 ADYVTVNISSPNTQNLRALQSDAALDGLLGAIAERRESLAKLPEKATGRPRRVPIFVKIA 235
Query: 188 PDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTE 247
PDL+ ++ IA + + +DG+I +NTT+ R R+ EETGGLSG P+R S
Sbjct: 236 PDLAEEQVAVIASTL--QRHGMDGVIATNTTISRDAVQGLRHAEETGGLSGAPVRESSNR 293
Query: 248 LISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
++ ++ + PIIGVGG+ S +DA EKI+AGA +VQIYT +Y GP LV ++ L
Sbjct: 294 VVRQLRHVLGKDFPIIGVGGILSAEDAVEKIRAGADVVQIYTGLIYRGPALVPQVAKALR 353
Query: 308 EL 309
+
Sbjct: 354 AM 355
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--------PILVKIA 107
A Y VN+SSPNT NLR LQ+ L LL + E R LA P PI VKIA
Sbjct: 176 ADYVTVNISSPNTQNLRALQSDAALDGLLGAIAERRESLAKLPEKATGRPRRVPIFVKIA 235
Query: 108 PDLSLDEKKDIADVV 122
PDL+ ++ IA +
Sbjct: 236 PDLAEEQVAVIASTL 250
>gi|114328545|ref|YP_745702.1| dihydroorotate dehydrogenase 2 [Granulibacter bethesdensis CGDNIH1]
gi|114316719|gb|ABI62779.1| dihydroorotate dehydrogenase [Granulibacter bethesdensis CGDNIH1]
Length = 358
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEK 195
A VN+SSPNT LR LQ +++L +L ++ AV PP+LVKIAPDLS +
Sbjct: 166 ADTITVNISSPNTPGLRDLQGEEKLAAILASI-----NRAVPQRPPLLVKIAPDLSDEGL 220
Query: 196 KDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY-- 253
+ + + VDGLI+SNTT+ R L + Y EE GGLSG PL ST ++
Sbjct: 221 EGVVRCCI--AAGVDGLIISNTTIARPAGLRSPYAEEAGGLSGRPLLATSTRMLGRAALL 278
Query: 254 --KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQ 311
+L G+L ++G GGV SG D KI+ GA++VQ+Y++F GP L+ RI E + LL+
Sbjct: 279 SEQLAPGRLTLVGCGGVASGADLLAKIEHGATMVQLYSAFALQGPSLLPRILKETQALLE 338
Query: 312 KEGYNSVSQAVGAA 325
+ GY ++ A G A
Sbjct: 339 ERGYRDIAAARGKA 352
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
A VN+SSPNT LR LQ +++L +L ++ A+ PP+LVKIAPDLS
Sbjct: 166 ADTITVNISSPNTPGLRDLQGEEKLAAILASI-----NRAVPQRPPLLVKIAPDLS 216
>gi|421888040|ref|ZP_16319156.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum K60-1]
gi|378966609|emb|CCF95904.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum K60-1]
Length = 372
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 200 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 259
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 260 QIANIADALL--RHRMDGVIATNTTIRREAVTGLPHAEEAGGLSGQPVREGSTRVIRALR 317
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 318 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 370
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 200 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 259
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 260 QIANIADALL 269
>gi|333367748|ref|ZP_08459990.1| dihydroorotate oxidase [Psychrobacter sp. 1501(2011)]
gi|332978413|gb|EGK15130.1| dihydroorotate oxidase [Psychrobacter sp. 1501(2011)]
Length = 345
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 4/168 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR LQ+ + L LL + NQLA P+++K+APDLS D
Sbjct: 165 ASYITVNISSPNTKNLRDLQSGEALTELLDNIKNRHNQLATDYGFYVPMVLKVAPDLSED 224
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ IA +++ ++DGLI +NTT+ R D + +E GGLSG P+ + STE++ + Y
Sbjct: 225 QVDYIARQLIE--FEIDGLIATNTTLSRTGVEDLPFGDEAGGLSGRPVGHLSTEIVQQFY 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ +GKLPIIGVGG+ SG+ A K++AGAS+VQ+Y+ +Y GP LV +
Sbjct: 283 ERLEGKLPIIGVGGIDSGEKAVRKLEAGASMVQLYSGMIYKGPGLVQQ 330
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR LQ+ + L LL + NQLA P+++K+APDLS D
Sbjct: 165 ASYITVNISSPNTKNLRDLQSGEALTELLDNIKNRHNQLATDYGFYVPMVLKVAPDLSED 224
Query: 114 EKKDIA 119
+ IA
Sbjct: 225 QVDYIA 230
>gi|187923720|ref|YP_001895362.1| dihydroorotate dehydrogenase 2 [Burkholderia phytofirmans PsJN]
gi|187714914|gb|ACD16138.1| Dihydroorotate oxidase [Burkholderia phytofirmans PsJN]
Length = 353
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 4/174 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL + + + +LA L P+ +KIAPDL +
Sbjct: 182 ASYVTVNISSPNTKNLRQLQGAGELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 241
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ K IAD +L + + +G+I +NTT+ R +Y +E GGLSG+P+ + S E+I ++
Sbjct: 242 QIKSIADTLL--RHQFEGVIATNTTLSRTAVAGMQYGDEAGGLSGKPVFDASNEVIRKLR 299
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
+PIIGVGG+FSG DA KI AGASLVQ+YT F+Y GP LV L
Sbjct: 300 AEVGETVPIIGVGGIFSGDDARAKIAAGASLVQLYTGFIYRGPALVAECAQALR 353
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL + + + +LA L P+ +KIAPDL +
Sbjct: 182 ASYVTVNISSPNTKNLRQLQGAGELDALLAALKDKQQRLADMHGKLVPLALKIAPDLDDE 241
Query: 114 EKKDIADVVL 123
+ K IAD +L
Sbjct: 242 QIKSIADTLL 251
>gi|359729205|ref|ZP_09267901.1| dihydroorotate dehydrogenase 2 [Leptospira weilii str. 2006001855]
Length = 382
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 5/203 (2%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D V + K A Y V+N+SSPNT LR Q ++ L++ + +N L
Sbjct: 175 AVEDYVYTLKKLSPYADYAVINISSPNTPGLRDFQKQENFASLIQGI---KNGLGKNFTI 231
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P+ VK APD+ + + + + + L KVDG++++NTT+D+ E+ GGLSG P
Sbjct: 232 PLFVKFAPDMEIKDLEALLETSLS--LKVDGVVLTNTTIDKSSLKAYPNVEKEGGLSGTP 289
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L+N+STE + Y++ K ++PIIGVGG+ S K A EKI AGA L+QIYT ++Y GP L
Sbjct: 290 LKNRSTEFVRVAYRILKRRIPIIGVGGIDSEKSALEKILAGADLIQIYTGYIYQGPFLPL 349
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
+I L+ L+K+ +VS VG
Sbjct: 350 KILEFLDRFLKKQNLKTVSDLVG 372
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q ++ L++ + +N L P+ V
Sbjct: 179 YVYTLKKLSPYADYAVINISSPNTPGLRDFQKQENFASLIQGI---KNGLGKNFTIPLFV 235
Query: 105 KIAPDLSLDE 114
K APD+ + +
Sbjct: 236 KFAPDMEIKD 245
>gi|383650317|ref|ZP_09960723.1| dihydroorotate dehydrogenase 2 [Streptomyces chartreusis NRRL
12338]
Length = 368
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 7/209 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 157 EAVADYVKSAERLAPYADYLVVNVSSPNTPGLRNLQATEALRPLLSAVREAADRAVAARR 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL----DARYKEETGG 235
P+LVKIAPDL+ ++ +AD+ ++ ++G+I +NTT+ R E L D+ +ETGG
Sbjct: 217 VPLLVKIAPDLADEDIDAVADLAVE--LGLEGIIATNTTIAR-EGLGLKSDSSLVKETGG 273
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+ +S E++ +Y G++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y G
Sbjct: 274 LSGAPLKERSLEVLRRLYARVGGRITLVGVGGVENAEDAWQRILAGATLVQGYSAFIYEG 333
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P I L L+ Y +++ AVGA
Sbjct: 334 PFWGRSIHKGLAARLRTSPYATLADAVGA 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATEALRPLLSAVREAADRAVAARRVPLLVKIAPDLADEDI 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ ++GI+
Sbjct: 233 DAVADLAVELGLEGII 248
>gi|293396740|ref|ZP_06641016.1| dihydroorotate oxidase [Serratia odorifera DSM 4582]
gi|291421004|gb|EFE94257.1| dihydroorotate oxidase [Serratia odorifera DSM 4582]
Length = 347
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 121/200 (60%), Gaps = 10/200 (5%)
Query: 109 DLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVV 168
D +++ KD + +D V A Y +N+SSPNT LR LQ + L LL V
Sbjct: 156 DTPVEQGKDDYLICMDKVY------PYAGYIAINISSPNTPGLRSLQYGEALDDLLAAVK 209
Query: 169 ETRNQLAVK--PLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
+ +L + P+ VKIAPDLS +E IAD +L + +DG+I +NTT+DR
Sbjct: 210 NKQAELHARHHKYVPVAVKIAPDLSEEELIQIADSLL--RHNIDGVIATNTTLDRKLVQG 267
Query: 227 ARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQ 286
Y E+ GGLSG PL+++STE+I + + +G+LPIIGVGG+ S A EKI AGA+LVQ
Sbjct: 268 LNYCEQMGGLSGRPLQSRSTEVIRRLSQELQGRLPIIGVGGIDSLTAAREKIAAGATLVQ 327
Query: 287 IYTSFVYHGPPLVTRIKSEL 306
IY+ F++HGP L+ I + +
Sbjct: 328 IYSGFIFHGPRLIKDIVTHI 347
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y +N+SSPNT LR LQ + L LL V + +L + P+
Sbjct: 166 YLICMDKVYPYAGYIAINISSPNTPGLRSLQYGEALDDLLAAVKNKQAELHARHHKYVPV 225
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDLS +E IAD +L
Sbjct: 226 AVKIAPDLSEEELIQIADSLL 246
>gi|344167744|emb|CCA79987.1| dihydroorotate dehydrogenase [blood disease bacterium R229]
Length = 344
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVVLKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 232 QIANIADALL--RHRMDGVIATNTTIRREAVAGLPHAEEAGGLSGQPVREGSTRVIRALR 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 290 GLLGDMVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 342
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVVLKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 232 QIANIADALL 241
>gi|441520023|ref|ZP_21001694.1| dihydroorotate dehydrogenase [Gordonia sihwensis NBRC 108236]
gi|441460467|dbj|GAC59655.1| dihydroorotate dehydrogenase [Gordonia sihwensis NBRC 108236]
Length = 366
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 138/235 (58%), Gaps = 13/235 (5%)
Query: 97 KPLP-PILVKIAPDLSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQ 155
+P P P+ V I ++ + + D V D G +A + VVNVSSPNT LR LQ
Sbjct: 141 QPRPGPVRVPIGANIGKTKVVPVEDAVDDYRHSARTLGPLADFVVVNVSSPNTPGLRDLQ 200
Query: 156 AKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVS 215
A D L+ +L TV++ ++ P+LVKIAPDLS ++ +AD+ ++ V G++ +
Sbjct: 201 AVDSLRPILATVLDVVDK-------PVLVKIAPDLSDEDVDAVADLAVE--LGVAGIVAT 251
Query: 216 NTTVDRYEYLDARYKEET---GGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGK 272
NTT+ R + R + E GGLSG P+ ++S E++ +Y+ G++ ++ VGG+ +
Sbjct: 252 NTTIRRDSLVTPRAEVEACGAGGLSGPPVADRSLEVLRRLYRRVGGRVALVSVGGIETVD 311
Query: 273 DAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGAAHK 327
A+E+I AGA L+Q+YT F+Y GP + + + L+ GY+S+ +AVG+A +
Sbjct: 312 QAWERICAGADLLQMYTGFIYGGPVRLRELHEGIAARLRAGGYSSIREAVGSAAQ 366
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
G +A + VVNVSSPNT LR LQA D L+ +L TV++ ++ P+LVKIAPDLS
Sbjct: 177 LGPLADFVVVNVSSPNTPGLRDLQAVDSLRPILATVLDVVDK-------PVLVKIAPDLS 229
Query: 112 LDEKKDIADVVLD-SVKGIL 130
++ +AD+ ++ V GI+
Sbjct: 230 DEDVDAVADLAVELGVAGIV 249
>gi|345010691|ref|YP_004813045.1| dihydroorotate dehydrogenase [Streptomyces violaceusniger Tu 4113]
gi|344037040|gb|AEM82765.1| Dihydroorotate dehydrogenase [Streptomyces violaceusniger Tu 4113]
Length = 366
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D V + A Y VVNVSSPNT LR LQA DQL+ LL V E ++
Sbjct: 156 AEAVADYVTSTERLAAHADYLVVNVSSPNTPGLRNLQAVDQLRPLLTAVREAADRTVTDR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY---LDARYKEETGG 235
P+LVKIAPDL+ ++ AD+ ++ +DG+I +NTT+ R D+R ETGG
Sbjct: 216 RVPLLVKIAPDLADEDVDAAADLAVE--LGLDGIIATNTTIARDGLGLTCDSRLTAETGG 273
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+ +S E++S +Y +L ++GVGG+ + +DA+E+I AGA+LVQ Y++F+Y G
Sbjct: 274 LSGAPLKARSLEVLSRLYARVGDRLTLVGVGGIETAEDAWERILAGATLVQGYSAFIYRG 333
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P I L + L Y ++++AVGA
Sbjct: 334 PFWCREIHRGLADRLAASPYATLAEAVGA 362
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 34/53 (64%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
A Y VVNVSSPNT LR LQA DQL+ LL V E ++ P+LVKIAP
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQAVDQLRPLLTAVREAADRTVTDRRVPLLVKIAP 225
>gi|300703930|ref|YP_003745532.1| dihydroorotate dehydrogenase [Ralstonia solanacearum CFBP2957]
gi|299071593|emb|CBJ42917.1| Dihydroorotate dehydrogenase [Ralstonia solanacearum CFBP2957]
Length = 372
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 200 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 259
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ +IAD +L + ++DG+I +NTT+ R + EE GGLSG+P+R ST +I +
Sbjct: 260 QIANIADALL--RHRMDGVIATNTTIRREAVAGLPHAEEAGGLSGQPVREGSTRVIRALR 317
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
L +PIIGVGG+ +G+ A EKI AGA LVQ+YT +Y GP LV L
Sbjct: 318 GLLGDAVPIIGVGGILAGEHAREKIDAGAQLVQLYTGLIYRGPGLVAECARAL 370
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+ +KIAPDL D
Sbjct: 200 ASYVTVNISSPNTKNLRQLQGASELDSLLGTLRGAQQRLADQHKRYVPVALKIAPDLDDD 259
Query: 114 EKKDIADVVL 123
+ +IAD +L
Sbjct: 260 QIANIADALL 269
>gi|326795812|ref|YP_004313632.1| dihydroorotate dehydrogenase [Marinomonas mediterranea MMB-1]
gi|326546576|gb|ADZ91796.1| Dihydroorotate dehydrogenase [Marinomonas mediterranea MMB-1]
Length = 344
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 4/184 (2%)
Query: 118 IADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--A 175
+ D D +K + + A Y N+SSPNT LR LQ + L L+ +VE + +
Sbjct: 147 VDDAASDYLKCLEEVIPYADYITANISSPNTPGLRSLQFGESLAELISPLVEAKKRYFEE 206
Query: 176 VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGG 235
P+ VKIAPD++ DE K +AD +++ VDG+I +NTT+ R R++EE GG
Sbjct: 207 YGKNVPLAVKIAPDMTDDEIKLVADTLVEQN--VDGIIATNTTLSRDAVKGHRHEEEAGG 264
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG P+R +ST ++ + K +LP+IGVGG+ SGKDA EK++AGA LVQIY+ F+Y G
Sbjct: 265 LSGAPVREQSTHVVRILSDYLKDELPVIGVGGILSGKDAVEKLEAGAKLVQIYSGFIYKG 324
Query: 296 PPLV 299
P LV
Sbjct: 325 PELV 328
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 2 VGLDESTCSRILSRVFRSGEWGCTPTH---NMLSSFARMRAWVLQFWLLGILKFGDVAHY 58
+G + ++SRV + G G + N+ +S + L+ L ++ + D Y
Sbjct: 112 MGFNNKGVEHLVSRVKKHGYKGILGINIGKNLTTSVDDAASDYLK-CLEEVIPYAD---Y 167
Query: 59 FVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQL--ALKPLPPILVKIAPDLSLDEKK 116
N+SSPNT LR LQ + L L+ +VE + + P+ VKIAPD++ DE K
Sbjct: 168 ITANISSPNTPGLRSLQFGESLAELISPLVEAKKRYFEEYGKNVPLAVKIAPDMTDDEIK 227
Query: 117 DIADVVLD-SVKGIL 130
+AD +++ +V GI+
Sbjct: 228 LVADTLVEQNVDGII 242
>gi|389795870|ref|ZP_10198978.1| dihydroorotate dehydrogenase 2 [Rhodanobacter fulvus Jip2]
gi|388430053|gb|EIL87258.1| dihydroorotate dehydrogenase 2 [Rhodanobacter fulvus Jip2]
Length = 345
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP--LPPILVKIAPDLS 191
++A Y +N+SSPNT LR LQ + L+ + + E + +L + P+L+KIAPDL
Sbjct: 163 ELASYITINISSPNTQGLRDLQEEATLRRFISVLREAQERLGSQHGRRKPMLLKIAPDLG 222
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
E+ +A+V+L + +DG+I NTT+D D + +E GGLSG+PL ST +++
Sbjct: 223 EAEQDAVAEVLLHTG--IDGVICGNTTIDHSAVADDPHGDEAGGLSGKPLFAHSTAVLAG 280
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
M+K +G++P+IGVGG+ G DA EK+ AGASLVQ+Y+ +Y GP LV E+
Sbjct: 281 MHKRLQGRIPLIGVGGILDGSDAAEKLDAGASLVQLYSGLIYRGPALVNECVDEI 335
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP--LPPI 102
+L + + ++A Y +N+SSPNT LR LQ + L+ + + E + +L + P+
Sbjct: 154 YLFCLTRVYELASYITINISSPNTQGLRDLQEEATLRRFISVLREAQERLGSQHGRRKPM 213
Query: 103 LVKIAPDLSLDEKKDIADVVLDS-VKGIL 130
L+KIAPDL E+ +A+V+L + + G++
Sbjct: 214 LLKIAPDLGEAEQDAVAEVLLHTGIDGVI 242
>gi|416051649|ref|ZP_11577697.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347993082|gb|EGY34459.1| dihydroorotate oxidase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 339
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 113/168 (67%), Gaps = 4/168 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLS 191
+ A Y VN+SSPNT +LR+LQ D LL+++ + LA + PI VKIAPDL+
Sbjct: 166 NYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKSRQQALAAQYQKYVPIAVKIAPDLT 225
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
E IAD +L + K+DG+I +NTT+ R + + E+ GGLSG+PL++KST +I+
Sbjct: 226 EAELVQIADTLL--RHKMDGVIATNTTISRDNVTNLKNAEQQGGLSGKPLQHKSTAIIAR 283
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
+++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y+ +YHGP LV
Sbjct: 284 LHRELKGQIPIIGSGGIDGVQNAQEKIRAGAELLQVYSGLIYHGPKLV 331
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + + + A Y VN+SSPNT +LR+LQ D LL+++ + LA + PI
Sbjct: 157 YLICLNRAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLQSIKSRQQALAAQYQKYVPI 216
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL+ E IAD +L
Sbjct: 217 AVKIAPDLTEAELVQIADTLL 237
>gi|418695683|ref|ZP_13256696.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
H1]
gi|421107872|ref|ZP_15568420.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
H2]
gi|409956427|gb|EKO15355.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
H1]
gi|410006978|gb|EKO60692.1| dihydroorotate dehydrogenase (fumarate) [Leptospira kirschneri str.
H2]
Length = 372
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D V + K A Y V+N+SSPNT LR Q ++ L++ + R L
Sbjct: 165 AVEDYVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKT 221
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P+ VK APD+ E + + + L K+DG+I++NTT+D+ + E+ GGLSG P
Sbjct: 222 PLFVKFAPDMQTKELEALLETSLS--LKIDGVILTNTTIDKSYLKEYPNVEKEGGLSGTP 279
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L+N+STE + Y++ K ++PIIGVGG+ S K A EKI AGA L+QIYT ++Y GP L
Sbjct: 280 LKNRSTEFVRVAYRILKRRIPIIGVGGIDSEKTALEKILAGADLIQIYTGYIYQGPFLPM 339
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
RI L+ L+K+ +V+ VG
Sbjct: 340 RILEFLDRFLEKQDLKTVADLVG 362
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q ++ L++ + R L P+ V
Sbjct: 169 YVYTLKKLSPYADYAVINISSPNTPGLRNFQKQENFVSLIQGI---RKGLGKNFKTPLFV 225
Query: 105 KIAPDLSLDE 114
K APD+ E
Sbjct: 226 KFAPDMQTKE 235
>gi|389691468|ref|ZP_10180262.1| dihydroorotate dehydrogenase, subfamily 2 [Microvirga sp. WSM3557]
gi|388588451|gb|EIM28741.1| dihydroorotate dehydrogenase, subfamily 2 [Microvirga sp. WSM3557]
Length = 361
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 133/218 (61%), Gaps = 9/218 (4%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D V I + +A + +NVSSPNT LR LQ + L LL +E
Sbjct: 138 VNIGANKDSTDRIADYVLCIERLCGLADFLTINVSSPNTPGLRDLQGEAFLDDLLARSME 197
Query: 170 TRN---QLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLD 226
R+ Q K + +L+KIAPD+SLD I L K +DGL VSNTT+ R + L
Sbjct: 198 ARDRADQGRRKTI--VLLKIAPDISLDTLDAIVATAL--KRGIDGLTVSNTTIARPDSLK 253
Query: 227 AR-YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLV 285
+ ETGGLSG+PL ST+L++E + + K+P++GVGGV S + A+ KI+AGASLV
Sbjct: 254 EKALASETGGLSGKPLFMPSTKLLAETFLRVERKIPLVGVGGVDSAEAAWGKIRAGASLV 313
Query: 286 QIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVG 323
Q+Y++ VY GP L+ IK L ++L E +++QAVG
Sbjct: 314 QLYSAMVYKGPGLIGDIKRGLLQVLGTE-RTTLAQAVG 350
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETR---NQLALKPLPP 101
++L I + +A + +NVSSPNT LR LQ + L LL +E R +Q K +
Sbjct: 153 YVLCIERLCGLADFLTINVSSPNTPGLRDLQGEAFLDDLLARSMEARDRADQGRRKTI-- 210
Query: 102 ILVKIAPDLSLD 113
+L+KIAPD+SLD
Sbjct: 211 VLLKIAPDISLD 222
>gi|340788191|ref|YP_004753656.1| dihydroorotate dehydrogenase [Collimonas fungivorans Ter331]
gi|340553458|gb|AEK62833.1| Dihydroorotate dehydrogenase [Collimonas fungivorans Ter331]
Length = 356
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL + + + +LA + PI +KIAPD+ +
Sbjct: 182 ASYVTVNISSPNTKNLRQLQGASELDALLSQLKQAQQKLADQYQRYVPIALKIAPDIDAE 241
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ K IAD +L + K+DG+I +NTT+ R +++ E GGLSG P+ ST ++ +++
Sbjct: 242 QIKTIADALL--RHKIDGVIATNTTISRDAVRGLQHENEAGGLSGAPVLALSTSVVRQLH 299
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEE 308
LPIIGVGG+FSG DA K+ AGASLVQ+Y+ +Y GP LV + L E
Sbjct: 300 GELGDALPIIGVGGIFSGADAQAKMAAGASLVQLYSGLIYRGPALVRECAAALRE 354
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 3 GLDESTCSRILSRVF--RSGEWGCTPTHNMLSSFARMRAWVLQFWLLGILKFGDVAHYFV 60
G+D + SR + R G G N + R + +L + K A Y
Sbjct: 131 GVDAFVANVQASRFYQERQGVLGLNIGKNADTPIER----AAEDYLHCLQKVYPYASYVT 186
Query: 61 VNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLDEKKDI 118
VN+SSPNT NLR+LQ +L LL + + + +LA + PI +KIAPD+ ++ K I
Sbjct: 187 VNISSPNTKNLRQLQGASELDALLSQLKQAQQKLADQYQRYVPIALKIAPDIDAEQIKTI 246
Query: 119 ADVVL 123
AD +L
Sbjct: 247 ADALL 251
>gi|448309330|ref|ZP_21499191.1| dihydroorotate dehydrogenase 2 [Natronorubrum bangense JCM 10635]
gi|445590635|gb|ELY44848.1| dihydroorotate dehydrogenase 2 [Natronorubrum bangense JCM 10635]
Length = 356
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 154/293 (52%), Gaps = 27/293 (9%)
Query: 41 VLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQA-------KDQLKHLLKTVVETRNQ 93
L+ G ++ G V Y P LR+ +A Q +K+ +ET
Sbjct: 79 ALEALGFGFVEIGTVTPYPQSGNDRPRLFRLREDEAMINRMGFNGQGMERVKSRLETDG- 137
Query: 94 LALKPLPPILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANL 151
P P+ V I S E + I D V D + A Y VVNVS PNT
Sbjct: 138 ---TPGFPLGVNIGKMNSSSESEAIEDYRRVFD------RLSPFADYVVVNVSCPNTPEE 188
Query: 152 RKLQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDG 211
+ + L+ + + ++E N A KP ILVKI PD D D+ D+V + +DG
Sbjct: 189 FDEGSPEHLRAIFE-MLEAEND-AEKP---ILVKIGPDSPDDSILDLVDIV--QEFGLDG 241
Query: 212 LIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSG 271
++ +NT+ R E L++ +EE GGLSG+P+ ++ST +I + + T G LPIIGVGGV S
Sbjct: 242 IVATNTSTTR-EGLESPNREEWGGLSGKPVEDRSTAVIRMIAEYTDGDLPIIGVGGVDSA 300
Query: 272 KDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+AGASLV++YT FVY GP +I L LL+++G++S+ AVGA
Sbjct: 301 GAAYEKIRAGASLVELYTGFVYEGPSTAKQINQGLVALLERDGFSSIEDAVGA 353
>gi|448318010|ref|ZP_21507549.1| dihydroorotate dehydrogenase 2 [Natronococcus jeotgali DSM 18795]
gi|445600880|gb|ELY54879.1| dihydroorotate dehydrogenase 2 [Natronococcus jeotgali DSM 18795]
Length = 356
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 148/291 (50%), Gaps = 19/291 (6%)
Query: 39 AWVLQFWLLGILKFGDVAHYFVVNVSSPNTANLRKLQAK-DQLKHLLKTVVETRNQLALK 97
A L+ G ++ G V Y P LR+ +A +++ + + R +L +
Sbjct: 77 ARALEALGFGFVEVGTVTPYPQAGNDRPRLFRLREDEAMVNRMGFNGQGMERVRGRLERE 136
Query: 98 PLP--PILVKIAPDLSLDEKKDIADV--VLDSVKGILKFGDVAHYFVVNVSSPNTANLRK 153
P P+ + + S E + I D V D + A Y VVNVS PNT +
Sbjct: 137 GAPQVPLGINVGKMNSSSEDEAIEDYRRVFD------RLAPFADYVVVNVSCPNTPDEFD 190
Query: 154 LQAKDQLKHLLKTVVETRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLI 213
A D L+ + +T+ + PILVKI PD D ++ +V + +DG++
Sbjct: 191 EAAPDHLRSIFETLAAENDDDV-----PILVKIGPDSPEDSMLELLGIV--EEHDLDGIV 243
Query: 214 VSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKD 273
+NTT R E + + E GGLSG PL +STE I + K LPIIGVGGV S +
Sbjct: 244 ATNTTTSR-EGVTSPTAAERGGLSGAPLAERSTETIRTLAKNADDDLPIIGVGGVDSAEH 302
Query: 274 AFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
A+EKI+ GASLVQ+YT FVY GP RI L +LL+++G++SV AVGA
Sbjct: 303 AYEKIRGGASLVQLYTGFVYGGPGTARRINRGLVDLLERDGFSSVEDAVGA 353
>gi|417777773|ref|ZP_12425587.1| dihydroorotate dehydrogenase (fumarate) [Leptospira weilii str.
2006001853]
gi|410782070|gb|EKR66635.1| dihydroorotate dehydrogenase (fumarate) [Leptospira weilii str.
2006001853]
Length = 372
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 5/203 (2%)
Query: 121 VVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP 180
V D V + K A Y V+N+SSPNT LR Q ++ L++ + +N L
Sbjct: 165 AVEDYVYTLKKLSPYADYAVINISSPNTPGLRDFQKQENFASLIQGI---KNGLGKNFTI 221
Query: 181 PILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEP 240
P+ VK APD+ + + + + + L KVDG++++NTT+D+ E+ GGLSG P
Sbjct: 222 PLFVKFAPDMEIKDLEALLETSLS--LKVDGVVLTNTTIDKSSLKAYPNVEKEGGLSGTP 279
Query: 241 LRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVT 300
L+N+STE + Y++ K ++PIIGVGG+ S K A EKI AGA L+QIYT ++Y GP L
Sbjct: 280 LKNRSTEFVRVAYRILKRRIPIIGVGGIDSEKSALEKILAGADLIQIYTGYIYQGPFLPL 339
Query: 301 RIKSELEELLQKEGYNSVSQAVG 323
+I L+ L+K+ +VS VG
Sbjct: 340 KILEFLDRFLKKQNLKTVSDLVG 362
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILV 104
++ + K A Y V+N+SSPNT LR Q ++ L++ + +N L P+ V
Sbjct: 169 YVYTLKKLSPYADYAVINISSPNTPGLRDFQKQENFASLIQGI---KNGLGKNFTIPLFV 225
Query: 105 KIAPDLSLDE 114
K APD+ + +
Sbjct: 226 KFAPDMEIKD 235
>gi|58265002|ref|XP_569657.1| Dihydroorotate dehydrogenase, mitochondrial precursor [Cryptococcus
neoformans var. neoformans JEC21]
gi|57225889|gb|AAW42350.1| Dihydroorotate dehydrogenase, mitochondrial precursor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 591
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP-LPPI 182
D V+G+ G A V+NVSSPNT LR LQ K QL+ LL VVE RN++A LP I
Sbjct: 242 DYVRGVRTLGPFADVVVINVSSPNTPGLRALQGKQQLERLLNDVVEERNKIAQGTGLPKI 301
Query: 183 LVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEY-LDARYKEETGGLSGEPL 241
VK+A DLS DE D+A V S V+G+IVSNTT+ R E L + +++ GGLSG+PL
Sbjct: 302 AVKVASDLSEDELADVASAVRSSG--VEGVIVSNTTIRRKELNLVSGNQDQIGGLSGKPL 359
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
+ + + L +PIIG GG+ SG DA AGAS+VQ+YTSF + G
Sbjct: 360 FPYALNALKTLRPLLPPSIPIIGCGGISSGSDALTMANAGASIVQVYTSFGFRGVGTPRL 419
Query: 302 IKSELEELLQKEGYNS 317
IK E+ E L+ E + +
Sbjct: 420 IKDEITEHLKGESWKT 435
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKP-LPPIL 103
++ G+ G A V+NVSSPNT LR LQ K QL+ LL VVE RN++A LP I
Sbjct: 243 YVRGVRTLGPFADVVVINVSSPNTPGLRALQGKQQLERLLNDVVEERNKIAQGTGLPKIA 302
Query: 104 VKIAPDLSLDEKKDIADVVLDS-VKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKH 162
VK+A DLS DE D+A V S V+G++ +N+ S N + L K +
Sbjct: 303 VKVASDLSEDELADVASAVRSSGVEGVIVSNTTIRRKELNLVSGNQDQIGGLSGKPLFPY 362
Query: 163 LLKTVVETR 171
L + R
Sbjct: 363 ALNALKTLR 371
>gi|85375390|ref|YP_459452.1| dihydroorotate dehydrogenase 2 [Erythrobacter litoralis HTCC2594]
gi|122543414|sp|Q2N6N6.1|PYRD_ERYLH RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|84788473|gb|ABC64655.1| dihydroorotate dehydrogenase [Erythrobacter litoralis HTCC2594]
Length = 343
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 7/215 (3%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
+++ KD D + D + + A Y N+SSPNT LR LQ + L LL V+E
Sbjct: 135 INVGANKDSDDRIADYATMVRRMAPYASYLTANISSPNTPGLRALQDEGALTGLLDAVME 194
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
PP+ +K+APDL + IA + +D LIVSNTT+ R + L +R
Sbjct: 195 APGADG----PPVFLKVAPDLEPADVDAIARIAIDKGLGA--LIVSNTTIFRPD-LQSRD 247
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
++ETGGLSG PL+ + + + + T G +P++GVGG+ + DA+E+I+AGASLVQ+Y+
Sbjct: 248 RDETGGLSGAPLKPLALQRLRDFRSATGGAIPLVGVGGIATIDDAWERIRAGASLVQVYS 307
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY GP L I L L++ G S+ +AVG+
Sbjct: 308 AMVYEGPGLGRSIARGLSRKLREHGMASIEEAVGS 342
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 49 ILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAP 108
+ + A Y N+SSPNT LR LQ + L LL V+E PP+ +K+AP
Sbjct: 154 VRRMAPYASYLTANISSPNTPGLRALQDEGALTGLLDAVMEAPGADG----PPVFLKVAP 209
Query: 109 DLSLDEKKDIADVVLDSVKGIL 130
DL + IA + +D G L
Sbjct: 210 DLEPADVDAIARIAIDKGLGAL 231
>gi|342903583|ref|ZP_08725393.1| Dihydroorotate dehydrogenase [Haemophilus haemolyticus M21621]
gi|341955146|gb|EGT81610.1| Dihydroorotate dehydrogenase [Haemophilus haemolyticus M21621]
Length = 339
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 134 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLS 191
+ A Y VN+SSPNT +LR+LQ D LL+ + + + LA PI VKIAPDL+
Sbjct: 166 NYAGYITVNISSPNTPDLRQLQYGDYFDDLLRGIKDRQAILANQYNKYVPIAVKIAPDLT 225
Query: 192 LDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISE 251
E IAD ++ + K+DG+I +NTT+ R + + E+ GGLSG+PL+NKSTE+I
Sbjct: 226 ESELVQIADTLV--RHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQNKSTEIIKR 283
Query: 252 MYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y+ +YHGP LV +
Sbjct: 284 LHQELKGQIPIIGSGGIDGVQNAQEKIEAGAELLQVYSGLIYHGPKLVKEL 334
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ + K + A Y VN+SSPNT +LR+LQ D LL+ + + + LA PI
Sbjct: 157 YIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRGIKDRQAILANQYNKYVPI 216
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL+ E IAD ++
Sbjct: 217 AVKIAPDLTESELVQIADTLV 237
>gi|68250080|ref|YP_249192.1| dihydroorotate dehydrogenase 2 [Haemophilus influenzae 86-028NP]
gi|145632847|ref|ZP_01788580.1| dihydroorotate dehydrogenase [Haemophilus influenzae 3655]
gi|145634284|ref|ZP_01789994.1| dihydroorotate dehydrogenase [Haemophilus influenzae PittAA]
gi|81335496|sp|Q4QKB5.1|PYRD_HAEI8 RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|68058279|gb|AAX88532.1| dihydroorotate dehydrogenase [Haemophilus influenzae 86-028NP]
gi|144986503|gb|EDJ93069.1| dihydroorotate dehydrogenase [Haemophilus influenzae 3655]
gi|145268264|gb|EDK08258.1| dihydroorotate dehydrogenase [Haemophilus influenzae PittAA]
Length = 339
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 124/194 (63%), Gaps = 10/194 (5%)
Query: 111 SLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVET 170
SL++ KD D + + K + A Y VN+SSPNT +LR+LQ D LL+++ +
Sbjct: 149 SLEQGKD------DYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDR 202
Query: 171 RNQLA--VKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR 228
+ LA PI VKIAPDL+ E IAD ++ + K+DG+I +NTTV R + +
Sbjct: 203 QAILANQYNKYVPIAVKIAPDLTESELVQIADTLV--RHKMDGVIATNTTVSRDTVMGMK 260
Query: 229 YKEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIY 288
E+ GGLSG+PL++KSTE+I +++ KG++PIIG GG+ ++A EKI+AGA L+Q+Y
Sbjct: 261 NAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVY 320
Query: 289 TSFVYHGPPLVTRI 302
+ +YHGP LV +
Sbjct: 321 SGLIYHGPKLVKEL 334
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
++ + K + A Y VN+SSPNT +LR+LQ D LL+++ + + LA PI
Sbjct: 157 YIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPI 216
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL+ E IAD ++
Sbjct: 217 AVKIAPDLTESELVQIADTLV 237
>gi|77360610|ref|YP_340185.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas haloplanktis
TAC125]
gi|123588195|sp|Q3IGZ1.1|PYRD_PSEHT RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|76875521|emb|CAI86742.1| dihydro-orotate oxidase, FMN-linked [Pseudoalteromonas haloplanktis
TAC125]
Length = 336
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 4/185 (2%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + + K + A Y VN+SSPNT LR LQ L LL+++ + L K P
Sbjct: 154 DYIHCMRKVFEHASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLVAKHGKQVP 213
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+LVKIAPDL + +++ +L +K +DG+I +NTT++R +Y +E GGLSG+P+
Sbjct: 214 MLVKIAPDLDPIQIAQVSESLLSNK--IDGVIATNTTLERSMVAGQQYADEAGGLSGQPV 271
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R ++T ++SE+ +LT G+LPIIGVGG+ A EKI AGA LVQIYT F+Y GP L+
Sbjct: 272 RERATHVVSELKRLTNGQLPIIGVGGIDDVSSAKEKINAGADLVQIYTGFIYKGPQLIKS 331
Query: 302 IKSEL 306
I L
Sbjct: 332 IVDSL 336
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPILVKIAPDL 110
A Y VN+SSPNT LR LQ L LL+++ + L K P+LVKIAPDL
Sbjct: 166 ASYITVNISSPNTPGLRDLQYGAALDDLLQSLKNEQLDLVAKHGKQVPMLVKIAPDL 222
>gi|152980020|ref|YP_001354203.1| dihydroorotate dehydrogenase 2 [Janthinobacterium sp. Marseille]
gi|189038426|sp|A6T106.1|PYRD_JANMA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|151280097|gb|ABR88507.1| dihydroorotate oxidase [Janthinobacterium sp. Marseille]
Length = 345
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--VKPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL + E + +L+ K PI +KIAPD+ L+
Sbjct: 173 ASYVTVNISSPNTKNLRQLQGASELDALLSQLKEAQQRLSDQHKRYVPIALKIAPDMELE 232
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ + IA +L + K+DG+I +NTTV R +Y EETGGLSG P+ S +I +
Sbjct: 233 QIQTIAQALL--RHKMDGVIATNTTVSREAVKGLKYAEETGGLSGAPVFEASNTVIRALK 290
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSELE 307
LPIIGVGG+ SG DA KI AGASLVQ+YT +Y GP LV + L
Sbjct: 291 SELGDALPIIGVGGILSGNDAQAKIAAGASLVQLYTGLIYRGPALVKECAAALH 344
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPI 102
+L+ + K A Y VN+SSPNT NLR+LQ +L LL + E + +L+ K PI
Sbjct: 162 YLICLEKVYPYASYVTVNISSPNTKNLRQLQGASELDALLSQLKEAQQRLSDQHKRYVPI 221
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
+KIAPD+ L++ + IA +L
Sbjct: 222 ALKIAPDMELEQIQTIAQALL 242
>gi|73661587|ref|YP_300368.1| dihydroorotate dehydrogenase 2 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494102|dbj|BAE17423.1| putative dihydroorotate dehydrogenase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 355
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 122/200 (61%), Gaps = 6/200 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLPPIL 183
D +K I F + +F VN+SSPNT NL+ KD+ L + + + + ++ PI
Sbjct: 158 DYIKVIDTFKNDVTFFTVNISSPNTENLQSFHDKDEFSQLCEAIQTYKYKESLNV--PIF 215
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRN 243
+K+ DLSLD + ++ DG+I++NTT R E L + ++EETGGLSG+PL
Sbjct: 216 IKLTSDLSLD---GLGAMLTPITQTFDGIILANTTQQR-EALHSNHREETGGLSGKPLFE 271
Query: 244 KSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIK 303
++ +LIS YK T G+ IIG GG+F+ +D + ++ GASLVQIY++ V+ GP L ++
Sbjct: 272 RNLKLISYAYKQTDGQFLIIGTGGIFNAEDVIKMMRQGASLVQIYSALVFEGPGLTQKLN 331
Query: 304 SELEELLQKEGYNSVSQAVG 323
+L L+ GYN+V++ +G
Sbjct: 332 KQLAHYLKSNGYNNVNEIIG 351
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 52 FGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLS 111
F + +F VN+SSPNT NL+ KD+ L + + + + +L PI +K+ DLS
Sbjct: 166 FKNDVTFFTVNISSPNTENLQSFHDKDEFSQLCEAIQTYKYKESLN--VPIFIKLTSDLS 223
Query: 112 LDEKKDIADVVLDSVKGIL 130
LD + + + GI+
Sbjct: 224 LDGLGAMLTPITQTFDGII 242
>gi|411001482|ref|ZP_11377811.1| dihydroorotate dehydrogenase 2 [Streptomyces globisporus C-1027]
Length = 370
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ D VK A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 156 AEAAADYVKSTEALAAHADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTR 215
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEE----TG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG++ +NTT+ R E L + E TG
Sbjct: 216 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIVATNTTIAR-EGLGLKSGPELLGETG 272
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++S +Y ++ ++GVGGV + +DA+++I AGA+LVQ Y++F+Y
Sbjct: 273 GLSGAPLKARSLEVLSRLYARVGDRITLVGVGGVETAEDAWQRILAGATLVQGYSAFIYE 332
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP I L L Y ++++AVGA
Sbjct: 333 GPFYARAIHKGLAARLATSPYATLAEAVGA 362
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATESLRPLLTAVREAADRTVTTRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD 124
+AD+ ++
Sbjct: 233 DAVADLAVE 241
>gi|258622858|ref|ZP_05717874.1| dihydroorotate dehydrogenase [Vibrio mimicus VM573]
gi|262171490|ref|ZP_06039168.1| dihydroorotate dehydrogenase [Vibrio mimicus MB-451]
gi|424809763|ref|ZP_18235136.1| dihydroorotate dehydrogenase [Vibrio mimicus SX-4]
gi|258584797|gb|EEW09530.1| dihydroorotate dehydrogenase [Vibrio mimicus VM573]
gi|261892566|gb|EEY38552.1| dihydroorotate dehydrogenase [Vibrio mimicus MB-451]
gi|342322860|gb|EGU18647.1| dihydroorotate dehydrogenase [Vibrio mimicus SX-4]
Length = 336
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPPILVKIAPDLSLD 193
A Y VN+SSPNT LR LQ + L LL + + +LA K P+ +KIAPDLS D
Sbjct: 166 AGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPLALKIAPDLSDD 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E K I +L K K+DG+I +NTT+DR ++ +ETGGLSG PL+ +STE+I +Y
Sbjct: 226 EIKQICQSLL--KNKIDGVIATNTTLDRSLVEGMKFADETGGLSGRPLQTRSTEVIKSLY 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
K ++PIIGVGG+ S A EK+ AGA LVQ+Y+ F+Y GP LV I L
Sbjct: 284 KELGDEVPIIGVGGIDSYISAKEKLMAGAKLVQVYSGFIYQGPRLVADIVKNL 336
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+ + K A Y VN+SSPNT LR LQ + L LL + + +LA K P+
Sbjct: 155 YLICMDKVYPYAGYIAVNISSPNTPGLRSLQYGEALDELLSALKTRQAELAAKHDKYVPL 214
Query: 103 LVKIAPDLSLDEKKDIADVVL-DSVKGIL 130
+KIAPDLS DE K I +L + + G++
Sbjct: 215 ALKIAPDLSDDEIKQICQSLLKNKIDGVI 243
>gi|393776841|ref|ZP_10365135.1| Dihydroorotate dehydrogenase (quinone) [Ralstonia sp. PBA]
gi|392716198|gb|EIZ03778.1| Dihydroorotate dehydrogenase (quinone) [Ralstonia sp. PBA]
Length = 343
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAV--KPLPPILVKIAPDLSLD 193
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDGLLSTLRTAQQRLAEQHKRYVPMVLKIAPDLDDD 231
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
+ ++I D +L + +DG+I +NTT+ R R+ EE GGLSG P+R S +I +
Sbjct: 232 QIRNIGDALL--RLGIDGVIATNTTLSREAVQGMRHAEEAGGLSGAPVRTASQRVIRALR 289
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ PIIGVGG+ G DA KI AGA LVQ+YT +Y GP LV L
Sbjct: 290 AIVGDDFPIIGVGGIMHGADARAKIDAGAQLVQLYTGLIYRGPALVREAAQAL 342
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLA--LKPLPPILVKIAPDLSLD 113
A Y VN+SSPNT NLR+LQ +L LL T+ + +LA K P+++KIAPDL D
Sbjct: 172 ASYVTVNISSPNTKNLRQLQGASELDGLLSTLRTAQQRLAEQHKRYVPMVLKIAPDLDDD 231
Query: 114 EKKDIADVVL 123
+ ++I D +L
Sbjct: 232 QIRNIGDALL 241
>gi|291614843|ref|YP_003525000.1| dihydroorotate dehydrogenase [Sideroxydans lithotrophicus ES-1]
gi|291584955|gb|ADE12613.1| dihydroorotate dehydrogenase [Sideroxydans lithotrophicus ES-1]
Length = 344
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 118/193 (61%), Gaps = 6/193 (3%)
Query: 124 DSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVK--PLPP 181
D + G+ K A Y VN+SSPNT NLR+LQ D+L LL + + +LA + P
Sbjct: 155 DYLIGLRKVYAHASYVAVNISSPNTKNLRQLQGGDELDALLAQLKAEQEKLAQQHGKYVP 214
Query: 182 ILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPL 241
+ VKIAPDL ++ K IA +++ K ++DG+I +NTT+ R + ETGGLSG P+
Sbjct: 215 LAVKIAPDLDSEQVKQIAALLI--KHRIDGVIATNTTLSREGVEGLPHGNETGGLSGAPV 272
Query: 242 RNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTR 301
R KST +I ++ LPIIGVGG+ G DA EK++AGA+LVQ+Y+ VY G LVT
Sbjct: 273 REKSTAVIRQLAAELNDTLPIIGVGGILKGSDAVEKMQAGAALVQVYSGLVYRGQELVTE 332
Query: 302 IKSELEELLQKEG 314
+ + L K+G
Sbjct: 333 CAATIR--LSKQG 343
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALK--PLPPI 102
+L+G+ K A Y VN+SSPNT NLR+LQ D+L LL + + +LA + P+
Sbjct: 156 YLIGLRKVYAHASYVAVNISSPNTKNLRQLQGGDELDALLAQLKAEQEKLAQQHGKYVPL 215
Query: 103 LVKIAPDLSLDEKKDIADVVL 123
VKIAPDL ++ K IA +++
Sbjct: 216 AVKIAPDLDSEQVKQIAALLI 236
>gi|294628329|ref|ZP_06706889.1| dihydroorotate oxidase [Streptomyces sp. e14]
gi|292831662|gb|EFF90011.1| dihydroorotate oxidase [Streptomyces sp. e14]
Length = 371
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
+ V D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 157 EAVGDYVKSAERLAPYADYLVVNVSSPNTPGLRNLQATEALRPLLSAVREAADRAVPGRR 216
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYL----DARYKEETGG 235
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L D +ETGG
Sbjct: 217 VPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-EGLGLTSDPALVQETGG 273
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
LSG PL+ +S E++ +Y ++ ++GVGG+ S +DA+++I AGA+LVQ Y++F+Y G
Sbjct: 274 LSGAPLKARSLEVLRRLYARVGDRITLVGVGGIESAEDAWQRILAGATLVQGYSAFIYEG 333
Query: 296 PPLVTRIKSELEELLQKEGYNSVSQAVGA 324
P + L L+ Y +++ AVGA
Sbjct: 334 PFWGRAVHKGLAARLRNSPYATLADAVGA 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 173 ADYLVVNVSSPNTPGLRNLQATEALRPLLSAVREAADRAVPGRRVPLLVKIAPDLADEDV 232
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 233 DAVADLAVELGLDGII 248
>gi|254487570|ref|ZP_05100775.1| dihydroorotate oxidase [Roseobacter sp. GAI101]
gi|214044439|gb|EEB85077.1| dihydroorotate oxidase [Roseobacter sp. GAI101]
Length = 347
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 110 LSLDEKKDIADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVE 169
L+L K D D K + D + VNVSSPNT LR LQ K L LL V
Sbjct: 138 LNLGANKTSTDRAADFAKVMEAARDHVDFATVNVSSPNTEKLRDLQGKAALAGLLAGV-- 195
Query: 170 TRNQLAVKPLPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARY 229
+AV+ P+ +KIAPDL+ E D+ADV ++ V +I +NTT+DR L +
Sbjct: 196 ----MAVRGATPVFLKIAPDLTEAEIADVADVA--NEAGVAAIIATNTTLDRTG-LHSVN 248
Query: 230 KEETGGLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYT 289
+++ GGLSG PL KST +++ + T +P++GVGG+ + +DA+ KI AGAS VQ+YT
Sbjct: 249 RDQMGGLSGAPLFEKSTRVLARLSTFTD--IPLVGVGGISTAEDAYAKICAGASAVQLYT 306
Query: 290 SFVYHGPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
+ VY G +V I L+ LL ++G+ SV+ AVG+
Sbjct: 307 ALVYGGLSIVADIAHGLDALLARDGFTSVTDAVGS 341
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 54 DVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
D + VNVSSPNT LR LQ K L LL V+ R P+ +KIAPDL+
Sbjct: 162 DHVDFATVNVSSPNTEKLRDLQGKAALAGLLAGVMAVRGAT------PVFLKIAPDLTEA 215
Query: 114 EKKDIADVV 122
E D+ADV
Sbjct: 216 EIADVADVA 224
>gi|343084702|ref|YP_004773997.1| dihydroorotate dehydrogenase [Cyclobacterium marinum DSM 745]
gi|342353236|gb|AEL25766.1| Dihydroorotate dehydrogenase [Cyclobacterium marinum DSM 745]
Length = 346
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 120 DVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPL 179
D +LD + + YFVVNVSSPNT NLR+LQ K+ LK LL +VV N KP
Sbjct: 155 DAILDYLFCLHALHAHVDYFVVNVSSPNTPNLRELQEKEPLKKLL-SVVNEANYTYDKPR 213
Query: 180 PPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKE----ETGG 235
P IL+KIAPDL+ + DI +V + K+ G+I +NTT+DR E L KE GG
Sbjct: 214 P-ILLKIAPDLTNGQLDDIISIV--KETKIAGVIATNTTIDR-EVLKTPTKEVEAIGAGG 269
Query: 236 LSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHG 295
+SG+ L +STE+I + + ++ P+IGVGG+F+ +DA K++AGASL+QIYT +Y G
Sbjct: 270 ISGKVLNERSTEVIRYLTQKSENAFPVIGVGGIFTVEDAKAKLEAGASLIQIYTGMIYEG 329
Query: 296 PPLVTRIKSEL 306
P LV R+K L
Sbjct: 330 PSLVKRLKKGL 340
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 56 AH--YFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLD 113
AH YFVVNVSSPNT NLR+LQ K+ LK LL +VV N KP PIL+KIAPDL+
Sbjct: 169 AHVDYFVVNVSSPNTPNLRELQEKEPLKKLL-SVVNEANYTYDKPR-PILLKIAPDLTNG 226
Query: 114 EKKDIADVVLDS-VKGIL 130
+ DI +V ++ + G++
Sbjct: 227 QLDDIISIVKETKIAGVI 244
>gi|443628990|ref|ZP_21113326.1| putative Dihydroorotate dehydrogenase (quinone) [Streptomyces
viridochromogenes Tue57]
gi|443337414|gb|ELS51720.1| putative Dihydroorotate dehydrogenase (quinone) [Streptomyces
viridochromogenes Tue57]
Length = 359
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 128/210 (60%), Gaps = 7/210 (3%)
Query: 119 ADVVLDSVKGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKP 178
A+ V D VK + A Y VVNVSSPNT LR LQA + L+ LL V E ++
Sbjct: 144 AEAVGDYVKSTERLAPYADYLVVNVSSPNTPGLRNLQATEALRPLLSAVREAADRTVPGR 203
Query: 179 LPPILVKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYK----EETG 234
P+LVKIAPDL+ ++ +AD+ ++ +DG+I +NTT+ R E L + + +ETG
Sbjct: 204 RVPLLVKIAPDLADEDVDAVADLAVE--LGLDGIIATNTTIAR-EGLGLKSEPSLVKETG 260
Query: 235 GLSGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYH 294
GLSG PL+ +S E++ +Y ++ ++GVGG+ + +DA+++I AGA+LVQ Y++FVY
Sbjct: 261 GLSGAPLKARSLEVLRRLYARVGDRITLVGVGGIENAEDAWQRILAGATLVQGYSAFVYE 320
Query: 295 GPPLVTRIKSELEELLQKEGYNSVSQAVGA 324
GP I L L+ Y +++ AVGA
Sbjct: 321 GPFWGRAIHKGLAARLRTSPYATLADAVGA 350
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLPPILVKIAPDLSLDEK 115
A Y VVNVSSPNT LR LQA + L+ LL V E ++ P+LVKIAPDL+ ++
Sbjct: 161 ADYLVVNVSSPNTPGLRNLQATEALRPLLSAVREAADRTVPGRRVPLLVKIAPDLADEDV 220
Query: 116 KDIADVVLD-SVKGIL 130
+AD+ ++ + GI+
Sbjct: 221 DAVADLAVELGLDGII 236
>gi|225010645|ref|ZP_03701115.1| Dihydroorotate oxidase [Flavobacteria bacterium MS024-3C]
gi|225005198|gb|EEG43150.1| Dihydroorotate oxidase [Flavobacteria bacterium MS024-3C]
Length = 345
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 116/170 (68%), Gaps = 8/170 (4%)
Query: 138 YFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VETR---NQLAVKPLPPILVKIAPDLSLD 193
YFVVNVSSPNT LR+LQ K+ L LLK + VE N+ A KP P L+KIAPDL+ D
Sbjct: 171 YFVVNVSSPNTPGLRELQEKEPLTALLKALKVENALLANKYAQKP-KPFLLKIAPDLTED 229
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDAR-YKEETGGLSGEPLRNKSTELISEM 252
+ DI ++ +++ +DG+I +NTT+ R + + +E GGLSG PLR +STE+I +
Sbjct: 230 QLLDIIAIIHETQ--IDGVIATNTTIGREGLVSEKSLLKEAGGLSGAPLRKRSTEVIRFL 287
Query: 253 YKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRI 302
+ + PIIGVGG+ S +DA EK++AGA+LVQ++T FVY GP LV +I
Sbjct: 288 SQKSGNAFPIIGVGGIHSPEDALEKLEAGATLVQLWTGFVYEGPALVKQI 337
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 58 YFVVNVSSPNTANLRKLQAKDQLKHLLKTV-VET---RNQLALKPLPPILVKIAPDLSLD 113
YFVVNVSSPNT LR+LQ K+ L LLK + VE N+ A KP P L+KIAPDL+ D
Sbjct: 171 YFVVNVSSPNTPGLRELQEKEPLTALLKALKVENALLANKYAQKP-KPFLLKIAPDLTED 229
Query: 114 EKKDIADVVLDS 125
+ DI ++ ++
Sbjct: 230 QLLDIIAIIHET 241
>gi|427724325|ref|YP_007071602.1| dihydroorotate oxidase A [Leptolyngbya sp. PCC 7376]
gi|427356045|gb|AFY38768.1| dihydroorotate oxidase A [Leptolyngbya sp. PCC 7376]
Length = 380
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 19/206 (9%)
Query: 127 KGILKFGD-VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLAVKPLPPIL 183
KG +F + VA YFVVNVSSPNT LR LQ +Q++ +L + T N+ PIL
Sbjct: 178 KGSFEFLESVADYFVVNVSSPNTPGLRSLQGGEQIQPILDALKTANTNNK-------PIL 230
Query: 184 VKIAPDLSLDEKKDIADVVLDSKCKVDGLIVSNTTVDR-------YEYLDARYKEETGGL 236
+KI+PDL + +I V + ++ G+I +NTT R E EE GG+
Sbjct: 231 IKISPDLEWEAIANI--VTIAQNYELSGIIATNTTTKRTGLKTKILEKTGNPVTEEAGGI 288
Query: 237 SGEPLRNKSTELISEMYKLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGP 296
SG P+R +STE+I +Y+ T+G LPIIGVGG+F + A+EKI AGA+++Q+YT ++Y GP
Sbjct: 289 SGAPVRQRSTEVIRFIYEKTEGTLPIIGVGGIFLAEHAWEKITAGATILQLYTGWIYEGP 348
Query: 297 PLVTRIKSELEELLQKEGYNSVSQAV 322
++ + L L + N +S+A+
Sbjct: 349 WIIPNVLKGLLAKLDEHNLNHISEAI 374
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 12/70 (17%)
Query: 55 VAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTV--VETRNQLALKPLPPILVKIAPDLSL 112
VA YFVVNVSSPNT LR LQ +Q++ +L + T N+ PIL+KI+PDL
Sbjct: 187 VADYFVVNVSSPNTPGLRSLQGGEQIQPILDALKTANTNNK-------PILIKISPDL-- 237
Query: 113 DEKKDIADVV 122
E + IA++V
Sbjct: 238 -EWEAIANIV 246
>gi|378579146|ref|ZP_09827815.1| dihydro-orotate oxidase, FMN-linked [Pantoea stewartii subsp.
stewartii DC283]
gi|377818190|gb|EHU01277.1| dihydro-orotate oxidase, FMN-linked [Pantoea stewartii subsp.
stewartii DC283]
Length = 336
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--PILVKIAPDLSLD 193
A Y +N+SSPNT LR LQ + L LL ++ + +L + L P+ VKIAPDLS D
Sbjct: 166 AGYIAINISSPNTPGLRSLQYGEALDDLLSSIKSKQKELEKRHLKYVPVAVKIAPDLSED 225
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +AD ++ + ++DG+I +NTT+DR +Y EE GGLSG P++++ST +I +
Sbjct: 226 ELIQVADSLV--RHQIDGVIATNTTLDRTLVNGLKYSEEAGGLSGRPVQSRSTAVIQRLS 283
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLVTRIKSEL 306
+ +G+LPIIGVGG+ S A EKI AGA+LVQIY+ F+Y GP L+ I + +
Sbjct: 284 QELQGRLPIIGVGGIDSLTAAREKIAAGATLVQIYSGFIYKGPGLIKDIVTHI 336
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 45 WLLGILKFGDVAHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PI 102
+LL + K A Y +N+SSPNT LR LQ + L LL ++ + +L + L P+
Sbjct: 155 YLLCMEKIYAHAGYIAINISSPNTPGLRSLQYGEALDDLLSSIKSKQKELEKRHLKYVPV 214
Query: 103 LVKIAPDLSLDEKKDIAD-VVLDSVKGIL 130
VKIAPDLS DE +AD +V + G++
Sbjct: 215 AVKIAPDLSEDELIQVADSLVRHQIDGVI 243
>gi|398871208|ref|ZP_10626525.1| dihydroorotate dehydrogenase, subfamily 2 [Pseudomonas sp. GM74]
gi|398206803|gb|EJM93563.1| dihydroorotate dehydrogenase, subfamily 2 [Pseudomonas sp. GM74]
Length = 339
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 4/166 (2%)
Query: 136 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLAVKPLP--PILVKIAPDLSLD 193
A Y VNVSSPNT LR LQ D LK LL + E R +LA++ P+ +KIAPD+S +
Sbjct: 165 ASYVTVNVSSPNTPGLRSLQFGDSLKQLLADLAERRAELALRHGKHVPLAIKIAPDMSDE 224
Query: 194 EKKDIADVVLDSKCKVDGLIVSNTTVDRYEYLDARYKEETGGLSGEPLRNKSTELISEMY 253
E +A ++++ +D +I +NTT+ R + EE GGLSG P+R+KST + +
Sbjct: 225 ETAQVAQALIETG--MDAVIATNTTLSRVGVEGMEHGEEAGGLSGAPVRDKSTHTVQVLA 282
Query: 254 KLTKGKLPIIGVGGVFSGKDAFEKIKAGASLVQIYTSFVYHGPPLV 299
G+LPII GG+ GK A EKI AGASLVQIY+ F+Y GP L+
Sbjct: 283 SELGGRLPIIAAGGITEGKHAAEKIAAGASLVQIYSGFIYKGPALI 328
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 56 AHYFVVNVSSPNTANLRKLQAKDQLKHLLKTVVETRNQLALKPLP--PILVKIAPDLSLD 113
A Y VNVSSPNT LR LQ D LK LL + E R +LAL+ P+ +KIAPD+S +
Sbjct: 165 ASYVTVNVSSPNTPGLRSLQFGDSLKQLLADLAERRAELALRHGKHVPLAIKIAPDMSDE 224
Query: 114 EKKDIADVVLDS 125
E +A ++++
Sbjct: 225 ETAQVAQALIET 236
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,936,186,421
Number of Sequences: 23463169
Number of extensions: 198639353
Number of successful extensions: 589196
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4320
Number of HSP's successfully gapped in prelim test: 1411
Number of HSP's that attempted gapping in prelim test: 573286
Number of HSP's gapped (non-prelim): 8763
length of query: 328
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 186
effective length of database: 9,027,425,369
effective search space: 1679101118634
effective search space used: 1679101118634
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)