BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy5884
         (195 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|307191989|gb|EFN75379.1| Protocadherin-15 [Harpegnathos saltator]
          Length = 1694

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 137/177 (77%), Positives = 156/177 (88%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP+LPM+PPI +
Sbjct: 222 LVVNEENLDRDPPSPGRFRFQVVAREKTGVAASSPLSFVVTLNDVNDNAPQLPMMPPITV 281

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE +RQ+ K+EATDND G NAEITYSIYHVSN GL KF+IDP++GVIET  KL AGEQ
Sbjct: 282 QAGETKRQVTKVEATDNDEGENAEITYSIYHVSNNGLQKFKIDPKTGVIETMRKLNAGEQ 341

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           YSITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 342 YSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 398



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 442 RYQLLIKAEDTGGLYSTATVNIMVTDINDKNPEFVGLPYEFSVKEGEARKLIGRVHAEDA 501

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATDTGGK 134
           D G+NAEITY  +   +     F +DP +G + T  K++      ++Y   V A D    
Sbjct: 502 DEGINAEITY--FAPDDI---PFTVDPETGDVLT--KIVLDYEQNDEYKFVVTARDGAPD 554

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                  V+V V       PVF Q++Y+  V E
Sbjct: 555 YRLATATVTVKVIDVEDEVPVFHQSSYEARVKE 587


>gi|345486640|ref|XP_003425515.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15-like [Nasonia
           vitripennis]
          Length = 1618

 Score =  285 bits (728), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 134/176 (76%), Positives = 155/176 (88%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+ARE+ G AAS P+S  V LND+NDNAP LPM PPI +
Sbjct: 490 LVVNEENLDRDPPSPGRFRFQVVARERSGLAASSPLSFVVTLNDVNDNAPMLPMTPPITV 549

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE +R+++K+EATDND G NAEITYSIYHVSN GL KF+IDP+SG+IE+ GKL AGEQ
Sbjct: 550 QAGETKREVIKVEATDNDDGPNAEITYSIYHVSNNGLQKFKIDPKSGLIESVGKLNAGEQ 609

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           YSITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATI
Sbjct: 610 YSITVQATDNGGKYSQTIVEVNVIPGPNTRSPVFQQQVYEVQVSEGASINSTVATI 665



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q+I + +     S   ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 710 RYQLIIKAEDTGGLSSTCTVNIKVTDINDKNPEFEGLPYEFSVKEGEARKLIGRVHAEDA 769

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSS 136
           D G+NAEITY  +   +     F +DP +G + T   L      +Y   V A D      
Sbjct: 770 DEGINAEITY--FAPDDI---PFTVDPETGDVLTKLALDYEQNHEYKFVVTARDGAPDPR 824

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                V+V V       P+F Q++Y+ +V E
Sbjct: 825 LATATVTVRVIDVEDEVPIFHQSSYEASVKE 855



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 17/171 (9%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDND-LGVNAEITYSIYHVSN 95
            + +N+ D+ND  P   M+P P+ +         +V + ATD+D      ++ Y +     
Sbjct: 931  VVINVQDVNDIPPVFTMVPRPVTLDDNVPIGASVVNLIATDSDGTAPGNQVRYDVIGRGI 990

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK--SSQTIVEVSV--VPGPN 149
             G + F IDP SGV+     L  +   ++ + V+A D G    SS T V V V  V GP 
Sbjct: 991  AGKY-FVIDPDSGVLRVRDDLRKVTDTEFQVDVRAYDMGDPQLSSVTTVPVYVRHVAGPP 1049

Query: 150  TRSPV-FQQNTYDVNVSEGASINSTVATITV----SRLAS--GCAIMNKEE 193
            + + + F +++Y+V+V E A   + +  ++V    SR AS   C I    E
Sbjct: 1050 SEAGLGFAEDSYNVDVPEDAPAGTLIKVLSVINASSRDASLLDCEIYEGNE 1100



 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQ 62
           LDRD  N     FQ ++   + T ++  + + V ++D+NDNAP+         +P +   
Sbjct: 134 LDRDDENLSHVVFQ-LSCTVRATRSNRKIPVIVRVSDVNDNAPKFINTPYETTVPELTPV 192

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
                + +V   ATD D GVN  + YSI     TG+
Sbjct: 193 GSTIFKNVV---ATDADAGVNGLVEYSIAPGDGTGI 225


>gi|328783691|ref|XP_396248.4| PREDICTED: protocadherin-15 [Apis mellifera]
          Length = 1974

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 136/177 (76%), Positives = 155/177 (87%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP LPMIPPI +
Sbjct: 452 LVVNEENLDRDPPSPGRFRFQVVAREKTGVAASAPLSFVVILNDVNDNAPMLPMIPPITV 511

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE ++ + K+EATDND G NAEITYSIYHVSN GLHKF+IDPR+GVIE+  KL AGEQ
Sbjct: 512 QAGETKKVVTKVEATDNDEGENAEITYSIYHVSNNGLHKFKIDPRTGVIESVRKLNAGEQ 571

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +SITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 572 FSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 628



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 672 RYQLLIKAEDSGGLFSTATVNIKVTDINDKNPEFVGLPYEFSVKEGEARKLIGRVHAEDA 731

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATDTGGK 134
           D G+NAEITY  +   +     F +DP +G + T  K++      ++Y   V A D    
Sbjct: 732 DEGINAEITY--FAPDDI---PFTVDPETGDVLT--KIVLDYEQNDEYKFVVTARDGAPD 784

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                  V+V V       PVF Q++Y+  V E
Sbjct: 785 YRLATATVTVKVIDVEDEVPVFHQSSYEARVKE 817



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQ 60
           E LDRD  N     FQ+    KQ T     + + V ++DINDNAP+         +P + 
Sbjct: 94  EPLDRDDENLSHVVFQLSCTVKQ-TNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELT 152

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
                  + +V   A D D GVN  + YSI     TG+
Sbjct: 153 PVGSTIFKNVV---AVDADAGVNGIVEYSIAPGDGTGI 187


>gi|307175878|gb|EFN65693.1| Protocadherin-15 [Camponotus floridanus]
          Length = 1377

 Score =  282 bits (721), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 134/177 (75%), Positives = 155/177 (87%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP LPM+ PI +
Sbjct: 246 LVVNEENLDRDPPSPGRFRFQVVAREKTGVAASSPLSFVVTLNDVNDNAPLLPMMAPITL 305

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE ++Q+ K+EATDND G NAEITYSIYHVSN GLHKF+IDP++GVIE+  KL AGEQ
Sbjct: 306 QAGETKKQVAKVEATDNDEGENAEITYSIYHVSNNGLHKFKIDPKTGVIESVRKLNAGEQ 365

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           YSITVQATD GG+ SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 366 YSITVQATDKGGRYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 422



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 466 RYQLLIKAEDTGGLFSTATVNIMVTDINDKNPEFMDLPYEFSVKEGEARKLIGRVHAEDA 525

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSS 136
           D G+NAEITY  +   +     F +DP +G + T   L   +  +Y   V A D      
Sbjct: 526 DEGINAEITY--FAPDDI---PFIVDPETGDVLTKIVLDYEQNNEYKFVVTARDGAPDYR 580

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                V+V V       P+F+Q++Y+  V E
Sbjct: 581 LATATVTVKVIDVEDEVPLFRQSSYEARVKE 611


>gi|380016357|ref|XP_003692153.1| PREDICTED: protocadherin-15-like [Apis florea]
          Length = 1841

 Score =  282 bits (721), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 135/177 (76%), Positives = 155/177 (87%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP LPMIPPI +
Sbjct: 397 LVVNEENLDRDPPSPGRFRFQVVAREKTGVAASAPLSFVVILNDVNDNAPMLPMIPPITV 456

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE ++ + K+EATDND G NAEITYSIYHVSN GLHKF+I+PR+GVIE+  KL AGEQ
Sbjct: 457 QAGETKKVVTKVEATDNDEGENAEITYSIYHVSNNGLHKFKIEPRTGVIESVRKLNAGEQ 516

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +SITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 517 FSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 573



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 617 RYQLLIKAEDSGGLFSTATVNIKVTDINDKNPEFVGLPYEFSVKEGEARKLIGRVHAEDA 676

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATDTGGK 134
           D G+NAEITY  +   +     F +DP +G + T  K++      ++Y   V A D    
Sbjct: 677 DEGINAEITY--FAPDDI---PFTVDPETGDVLT--KIVLDYEQNDEYKFVVTARDGAPD 729

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                  V+V V       PVF Q++Y+  V E
Sbjct: 730 YRLATATVTVKVIDVEDEVPVFHQSSYEARVKE 762



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQ 60
           E LDRD  N     FQ+    KQ T     + + V ++DINDNAP+         +P + 
Sbjct: 95  EPLDRDDENLSHVVFQLSCTVKQ-TNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELT 153

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
                  + +V   A D D GVN  + YSI     TG+
Sbjct: 154 PVGSTIFKNVV---AVDADAGVNGIVEYSIAPGDGTGI 188



 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 13/156 (8%)

Query: 35  VPVSLTVNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYH 92
           V  SL++   D+ND  P    +P PI +         ++ + ATD+D    A      Y 
Sbjct: 844 VSTSLSLCFVDVNDIPPVFTSVPRPITLDDDIPIGTTVINLIATDSD--GTAPGNQVRYE 901

Query: 93  VSNTGL--HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEV---S 143
           +   G+    F IDP +GV+     L      +Y + V+A D G    SS T V V    
Sbjct: 902 IVGRGIANKYFMIDPDTGVLRVRDDLRKETDTEYQVDVRAYDMGEPQLSSVTTVPVYVRH 961

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           V   P      F +N+Y+V V E A  N+ +  IT+
Sbjct: 962 VATVPPEIGLGFAENSYNVEVPEDAGDNTLIKIITI 997


>gi|383865554|ref|XP_003708238.1| PREDICTED: cadherin-87A-like, partial [Megachile rotundata]
          Length = 1434

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/177 (75%), Positives = 154/177 (87%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP LPMI PI +
Sbjct: 405 LIVNEENLDRDPPSPGRFRFQVVAREKTGVAASAPLSFVVTLNDVNDNAPMLPMITPITV 464

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE +R + K+EATDND G NAEITYSIYHVSN GLHKF+IDP++GVIE+  KL AGEQ
Sbjct: 465 QAGETKRVVTKVEATDNDEGENAEITYSIYHVSNNGLHKFKIDPKTGVIESVRKLNAGEQ 524

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +SITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 525 FSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 581



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +     S   ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 625 RYQLLIKAEDSGGLSSTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARKLIGRVHAEDA 684

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSS 136
           D G+NAEITY  +   +     F +DP +G + T   L     ++Y   V A D      
Sbjct: 685 DEGINAEITY--FAPDDI---PFTVDPETGDVLTKIVLDYEQNDEYKFVVTARDGAPDYR 739

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                V+V V       PVF Q++Y+  V E
Sbjct: 740 LATATVTVKVIDVEDEVPVFHQSSYEARVKE 770


>gi|242023771|ref|XP_002432304.1| protocadherin-15 precursor, putative [Pediculus humanus corporis]
 gi|212517727|gb|EEB19566.1| protocadherin-15 precursor, putative [Pediculus humanus corporis]
          Length = 1512

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/179 (74%), Positives = 157/179 (87%), Gaps = 2/179 (1%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPP 58
           YL+VS+ENLDRDPP+PGKFRFQV+AREK   G AAS P++LTV+L D+NDNAP L MIPP
Sbjct: 432 YLIVSQENLDRDPPSPGKFRFQVVAREKSDSGNAASAPITLTVSLKDVNDNAPTLQMIPP 491

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           I ++AGE +R++V++EATDND G NA ITYSIYHVSN G  KF+IDPR+G++ T+GKLIA
Sbjct: 492 ITVEAGEGKREVVRVEATDNDYGENAVITYSIYHVSNNGRGKFKIDPRTGLVTTSGKLIA 551

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           GEQYSITVQATDTGGK SQTIVEV+V+PGPNTRSPVF Q  YD+ VSEGASINSTVATI
Sbjct: 552 GEQYSITVQATDTGGKLSQTIVEVTVIPGPNTRSPVFSQPVYDLQVSEGASINSTVATI 610



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +     S   ++ + + DIND  P    +P   ++  GE  + +  + A D 
Sbjct: 655 RYQLLIKAEDTGGLSSTATVNIKVTDINDKNPEFVDLPYEFKVNEGEINQTVGTVHAVDL 714

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           D G+NA ++YS+          F I+  +GVI+T+  L
Sbjct: 715 DEGINALVSYSL-----PSDIPFVINETTGVIKTSAAL 747



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 7   ENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
           E LDRD  N     FQ+    K +    ++PV   V ++DINDNAP   +  P +    E
Sbjct: 75  EPLDRDKDNLSHIVFQLTCSVKNKNKKRTIPV--IVRVSDINDNAPHF-INTPYETTVSE 131

Query: 66  ----ARRQIVKIEATDNDLGVNAEITYSI 90
                      I A D+D GVN  + YSI
Sbjct: 132 LTPVGTTIYQNILAKDSDAGVNGLVEYSI 160


>gi|340725229|ref|XP_003400975.1| PREDICTED: protocadherin Fat 3-like [Bombus terrestris]
          Length = 1961

 Score =  278 bits (712), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 133/177 (75%), Positives = 154/177 (87%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP LPMI PI +
Sbjct: 451 LVVNEENLDRDPPSPGRFRFQVVAREKTGVAASAPLSFVVILNDVNDNAPMLPMIAPITV 510

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE ++ + K+EATDND G NAEITYSIYHVSN GLHKF+IDP++G+IE+  KL AGEQ
Sbjct: 511 QAGETKKVVTKVEATDNDEGENAEITYSIYHVSNNGLHKFKIDPKTGLIESVRKLNAGEQ 570

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +SITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 571 FSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 627



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 671 RYQLLIKAEDSGGLFNTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARKLIGRVHAEDA 730

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATDTGGK 134
           D G+NAEITY  +   +     F +DP +G + T  K++      ++Y   V A D    
Sbjct: 731 DEGINAEITY--FAPDDI---PFTVDPETGDVLT--KIVLDYEQNDEYKFVVTARDGAPD 783

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                  V+V V       PVF Q++Y+  V E
Sbjct: 784 YRLATATVTVKVIDVEDEVPVFHQSSYEARVKE 816



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQ 62
           LDRD  N     FQ+    KQ T     + + V ++DINDNAP+         +P +   
Sbjct: 95  LDRDDENLSHVVFQLSCTVKQ-TNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPV 153

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
                + +V   A D D GVN  + YSI     TG+
Sbjct: 154 GSTIFKNVV---AVDADAGVNGIVEYSIAPGDGTGI 186


>gi|350403960|ref|XP_003486964.1| PREDICTED: protocadherin Fat 3-like [Bombus impatiens]
          Length = 1968

 Score =  278 bits (711), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 133/177 (75%), Positives = 154/177 (87%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP+PG+FRFQV+AREK G AAS P+S  V LND+NDNAP LPMI PI +
Sbjct: 451 LVVNEENLDRDPPSPGRFRFQVVAREKTGVAASAPLSFVVILNDVNDNAPMLPMIAPITV 510

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           QAGE ++ + K+EATDND G NAEITYSIYHVSN GLHKF+IDP++G+IE+  KL AGEQ
Sbjct: 511 QAGETKKVVTKVEATDNDEGENAEITYSIYHVSNNGLHKFKIDPKTGLIESVRKLNAGEQ 570

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +SITVQATD GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATIT
Sbjct: 571 FSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATIT 627



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 671 RYQLLIKAEDSGGLFNTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARKLIGRVHAEDA 730

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATDTGGK 134
           D G+NAEITY  +   +     F +DP +G + T  K++      ++Y   V A D    
Sbjct: 731 DEGINAEITY--FAPDDI---PFTVDPETGDVLT--KIVLDYEQNDEYKFVVTARDGAPD 783

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                  V+V V       PVF Q++Y+  V E
Sbjct: 784 YRLATATVTVKVIDVEDEVPVFHQSSYEARVKE 816



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQ 62
           LDRD  N     FQ+    KQ T     + + V ++DINDNAP+         +P +   
Sbjct: 95  LDRDDENLSHVVFQLSCTVKQ-TNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPV 153

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
                + +V   A D D GVN  + YSI     TG+
Sbjct: 154 GSTIFKNVV---AVDADAGVNGIVEYSIAPGDGTGI 186


>gi|91091750|ref|XP_968422.1| PREDICTED: similar to cadherin [Tribolium castaneum]
          Length = 1516

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/178 (67%), Positives = 153/178 (85%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+V++ NLDRDPPNPG+F+FQ++AREK GTAAS P+S+TV+LND+NDNAP LP+I P+ 
Sbjct: 422 YLLVNENNLDRDPPNPGRFKFQIVAREKGGTAASAPMSVTVHLNDVNDNAPMLPIIAPVG 481

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           + AG+ +RQ+  I+ATDND G NA +TYSIYHVSN G +KFRIDP +GV+ET GKL AG+
Sbjct: 482 VPAGDVKRQVATIKATDNDEGDNALVTYSIYHVSNNGNNKFRIDPNTGVLETVGKLNAGD 541

Query: 121 QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           QYS+TVQATD GG  SQ IVEV++ PGPNT+SP+F+Q+ Y++ VSEGA+INSTVATIT
Sbjct: 542 QYSLTVQATDKGGLYSQAIVEVTISPGPNTQSPIFEQSVYEIEVSEGATINSTVATIT 599



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQIVKIEATDN 78
           R+++I + +     S   ++ + + DIND  P     P    ++ G     +  ++ATD 
Sbjct: 643 RYKLIIKAEDAGKLSSTATVNIKVTDINDKNPEFVGDPYNFSVKEGLNSTSVGFVKATDA 702

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
           D G+NA +TYSI     +GL  F ID  +G I T   L    Q  Y   V A D      
Sbjct: 703 DEGINALVTYSI----PSGL-PFDIDNETGEIRTNRALDYETQKNYQFVVTAKDGAPDPR 757

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                VS+ V       P+F ++ Y  +V E
Sbjct: 758 LATATVSISVIDIEDELPIFTKSLYTASVPE 788



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIV 140
           N  +TYSI  VS   L +F I  +SGVI    KL   +  +Y + ++A D G  SS   V
Sbjct: 605 NDPVTYSI--VSGNDLRQFSIGAKSGVITVIRKLDREDLTRYKLIIKAEDAGKLSSTATV 662

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            + V    N ++P F  + Y+ +V EG  +NST
Sbjct: 663 NIKVT-DINDKNPEFVGDPYNFSVKEG--LNST 692



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 57/149 (38%), Gaps = 19/149 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGE 65
           LDRD  +     FQ+I   K  T     V + V L+DINDNAP     P    I      
Sbjct: 72  LDRDENSLSHIVFQLICTIK-STHKKRTVPVIVRLSDINDNAPEFVNTPYETSISELTPV 130

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNT------------GLHKFRID-PRSG--VI 110
                  I A D D GVN  + YSI    N             G   F I+ P  G   +
Sbjct: 131 GTTIFQDILAKDKDAGVNGLVEYSIVKGENLAHEDDDRIHSEDGFGYFAINLPHQGQVTV 190

Query: 111 ETTGKLIAGEQYSITVQATDTGGKSSQTI 139
             T      ++Y +TV ATD     +Q +
Sbjct: 191 NRTLDFEKTQRYYVTVVATDRAHDDTQRL 219


>gi|270001289|gb|EEZ97736.1| protocadherin 15 [Tribolium castaneum]
          Length = 1539

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/178 (67%), Positives = 153/178 (85%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+V++ NLDRDPPNPG+F+FQ++AREK GTAAS P+S+TV+LND+NDNAP LP+I P+ 
Sbjct: 445 YLLVNENNLDRDPPNPGRFKFQIVAREKGGTAASAPMSVTVHLNDVNDNAPMLPIIAPVG 504

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           + AG+ +RQ+  I+ATDND G NA +TYSIYHVSN G +KFRIDP +GV+ET GKL AG+
Sbjct: 505 VPAGDVKRQVATIKATDNDEGDNALVTYSIYHVSNNGNNKFRIDPNTGVLETVGKLNAGD 564

Query: 121 QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           QYS+TVQATD GG  SQ IVEV++ PGPNT+SP+F+Q+ Y++ VSEGA+INSTVATIT
Sbjct: 565 QYSLTVQATDKGGLYSQAIVEVTISPGPNTQSPIFEQSVYEIEVSEGATINSTVATIT 622



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQIVKIEATDN 78
           R+++I + +     S   ++ + + DIND  P     P    ++ G     +  ++ATD 
Sbjct: 666 RYKLIIKAEDAGKLSSTATVNIKVTDINDKNPEFVGDPYNFSVKEGLNSTSVGFVKATDA 725

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
           D G+NA +TYSI     +GL  F ID  +G I T   L    Q  Y   V A D      
Sbjct: 726 DEGINALVTYSI----PSGL-PFDIDNETGEIRTNRALDYETQKNYQFVVTAKDGAPDPR 780

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                VS+ V       P+F ++ Y  +V E
Sbjct: 781 LATATVSISVIDIEDELPIFTKSLYTASVPE 811



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIV 140
           N  +TYSI  VS   L +F I  +SGVI    KL   +  +Y + ++A D G  SS   V
Sbjct: 628 NDPVTYSI--VSGNDLRQFSIGAKSGVITVIRKLDREDLTRYKLIIKAEDAGKLSSTATV 685

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            + V    N ++P F  + Y+ +V EG  +NST
Sbjct: 686 NIKVT-DINDKNPEFVGDPYNFSVKEG--LNST 715



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 57/149 (38%), Gaps = 19/149 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGE 65
           LDRD  +     FQ+I   K  T     V + V L+DINDNAP     P    I      
Sbjct: 95  LDRDENSLSHIVFQLICTIK-STHKKRTVPVIVRLSDINDNAPEFVNTPYETSISELTPV 153

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNT------------GLHKFRID-PRSG--VI 110
                  I A D D GVN  + YSI    N             G   F I+ P  G   +
Sbjct: 154 GTTIFQDILAKDKDAGVNGLVEYSIVKGENLAHEDDDRIHSEDGFGYFAINLPHQGQVTV 213

Query: 111 ETTGKLIAGEQYSITVQATDTGGKSSQTI 139
             T      ++Y +TV ATD     +Q +
Sbjct: 214 NRTLDFEKTQRYYVTVVATDRAHDDTQRL 242


>gi|157118805|ref|XP_001653269.1| cadherin [Aedes aegypti]
 gi|108875581|gb|EAT39806.1| AAEL008421-PA [Aedes aegypti]
          Length = 1736

 Score =  236 bits (601), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 115/176 (65%), Positives = 139/176 (78%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L V++E LDRDPP+ GK+RFQV+ARE  G AAS P+SLTV+LND+NDNAP++ M+PP+ +
Sbjct: 454 LQVNEEGLDRDPPSQGKYRFQVVARETNGNAASAPMSLTVHLNDVNDNAPKMTMVPPVSL 513

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            AG+ RR + K+ ATDND G NA ITYSI+HVSN G +KF IDP+SG IET  +L AGEQ
Sbjct: 514 TAGDGRRLVTKVTATDNDSGENAVITYSIFHVSNNGGNKFAIDPKSGEIETRARLNAGEQ 573

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           YSITVQA+D GG SSQ IVEVSV PGPNT+ P F +  YDV VSEGA INSTV  +
Sbjct: 574 YSITVQASDIGGLSSQAIVEVSVTPGPNTKPPRFIKPVYDVQVSEGAEINSTVIVV 629



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I R +     +   ++ + + DIND  P      LP I    +  G     I  + 
Sbjct: 674 RYQLIIRAEDSGGLASSATVNIKVTDINDKNPEFDENVLPYI--FTVDEGRDNALIGTVH 731

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           ATD D G+NAEITY+I          F+I+ R+G I T  +L   +Q  Y   V A D  
Sbjct: 732 ATDADEGMNAEITYTI-----PSDIPFKINSRTGEIRTKSQLDYEKQKEYKFVVTAQDGA 786

Query: 133 -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                G +S T V+V  +P      P F ++  +V + E
Sbjct: 787 PEPRLGTASVT-VKVRDIPD---EVPRFMESMLEVKIPE 821


>gi|195444020|ref|XP_002069681.1| GK11655 [Drosophila willistoni]
 gi|194165766|gb|EDW80667.1| GK11655 [Drosophila willistoni]
          Length = 1731

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/176 (63%), Positives = 139/176 (78%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP PG+++FQV+ARE +  AAS P+SLTV+L D+NDN P+L M+ PI I
Sbjct: 450 LVVNEENLDRDPPAPGRYKFQVVAREPRTNAASAPLSLTVHLRDVNDNPPKLAMVAPISI 509

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            AG+ +R + ++ ATDND G NA +TYSIYHVSN G  KF I+ ++G IET G+L+AGEQ
Sbjct: 510 TAGDQQRLVTQVNATDNDEGANAVVTYSIYHVSNNGAQKFIINEQTGEIETHGRLLAGEQ 569

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           YSITVQATD GG SSQ IVEVSV PGPNT+ P F++  Y+V VSEGA INSTV  +
Sbjct: 570 YSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFEKAIYEVQVSEGAEINSTVTVV 625



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 24/170 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q+  G+    +  + 
Sbjct: 670 RYQLILKAEDNGGLSSSATVNIKVTDINDKNPEFDESTLPYV--FQVDEGQLDTFVGVVH 727

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+ +SG I T  KL   +Q  Y   V A D  
Sbjct: 728 ATDADEGINAEITYSI----PTDI-PFAINGKSGEIRTAKKLDYEKQNEYKFVVTAKDGA 782

Query: 133 -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                G +S T++ V  +P      P F     DV++ E  + N  VAT+
Sbjct: 783 PDARLGTASVTVM-VRDLPD---EVPRFSDARIDVHIPENEA-NYLVATV 827



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDRD  N     FQV    +  T     + + V ++DINDNAPR  M  P ++   E+  
Sbjct: 99  LDRDEENLSHIVFQVSCTVRT-TNKKRNIPIIVRVSDINDNAPRF-MNTPYEVTVPESTP 156

Query: 68  --RQIVK-IEATDNDLGVNAEITYSI 90
               I + I+A D D GVN  + Y I
Sbjct: 157 VGTTIFRNIQALDKDAGVNGLVEYFI 182



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 29/182 (15%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVK-IEATDNDLGVNA 84
            E  G      V L V + D ND APR   +P P+ +   +    ++  + A D D     
Sbjct: 882  ENDGDGPGDTVRLVVQVEDRNDVAPRFLTVPEPVTVNDDQPIGTVIATMPAIDADGTSPG 941

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEV 142
             +           L  F++DP +G +    +L   E  +Y + ++A D G     ++ ++
Sbjct: 942  NVVRYELIGRGKALKYFQVDPDTGAVRIRDELRKDEDTEYQVDIRAYDMGEPQLSSVAQL 1001

Query: 143  SV-------------------------VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V                         +  P T    F  ++Y  +V E  S+NST+  +
Sbjct: 1002 RVDVRHLLLDPNGESKIDANKLDSGLGIMNPETIGLAFSDDSYTTSVPESTSVNSTLKLV 1061

Query: 178  TV 179
             +
Sbjct: 1062 QI 1063


>gi|170037432|ref|XP_001846562.1| protocadherin-15 [Culex quinquefasciatus]
 gi|167880555|gb|EDS43938.1| protocadherin-15 [Culex quinquefasciatus]
          Length = 1631

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 110/176 (62%), Positives = 136/176 (77%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L V++E LDRDPP+ GK+RFQV+ARE  G AAS P+S+TV+LND+NDNAP+L M+ P+ +
Sbjct: 360 LQVNEEGLDRDPPSQGKYRFQVVAREANGNAASAPMSMTVHLNDVNDNAPKLAMVAPVTL 419

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            AG+ RR + K+ ATDND G NA +TYSI+HVSN G  KF +DP++G IET  +L AGEQ
Sbjct: 420 TAGDGRRLVTKVSATDNDAGENAVVTYSIFHVSNNGASKFTVDPKTGEIETRSRLNAGEQ 479

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           YSITVQA D GG +SQ IVEVSV PGPNT+ P F +  YDV VSEGA INSTV  +
Sbjct: 480 YSITVQAADIGGLTSQAIVEVSVTPGPNTKPPRFVKPVYDVQVSEGAEINSTVIVV 535



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 23/159 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I R +     +   ++ + + DIND  P      LP +    +  G+    I  + 
Sbjct: 580 RYQLIIRAEDNGGLASSATVNIKVTDINDKNPEFDENNLPYV--FSVDEGKDNVVIGTVR 637

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           ATD D G+NAEITY+I          F+I+ R+G I T  +L   +Q  Y   V A D  
Sbjct: 638 ATDADEGMNAEITYTI-----PSDIPFKINSRTGEIRTKSQLDYEKQKEYKFVVTAQDGA 692

Query: 133 -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                G +S T V+V  VP      P F ++  +V + E
Sbjct: 693 PEPRLGTASVT-VKVRDVPD---EVPRFMESVIEVKIPE 727


>gi|194745576|ref|XP_001955263.1| GF18671 [Drosophila ananassae]
 gi|190628300|gb|EDV43824.1| GF18671 [Drosophila ananassae]
          Length = 1704

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 112/178 (62%), Positives = 139/178 (78%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++NLDRDPP+PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 448 LVVNEDNLDRDPPSPGRFKFQVVAREPRTNAASAPLSLTVHLKDVNDNAPKLAMVSPISI 507

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ ATDND G NA +TY+IYHVSN G+ KF ID  +G I T G+L+AG
Sbjct: 508 TAGDQSESRLVTQVVATDNDEGPNAVVTYTIYHVSNNGIQKFTIDRETGEIRTQGRLLAG 567

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 568 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 625



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP I   Q+  G+A+  +  + 
Sbjct: 670 RYQLIVKAEDTGGLSSSATVNIKVTDINDKNPEFDASTLPYI--FQVDEGKAQASVGVVH 727

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I+T  +L      +Y   V A D  
Sbjct: 728 ATDADEGINAEITYSI----PTDI-PFTINATSGEIQTAKELDYETLNEYKFVVTAKDGA 782

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 783 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NFLVATV 827



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 21/140 (15%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDRD  N     FQV    +  T+    + + V ++DINDNAPR  M  P ++   E+  
Sbjct: 98  LDRDEENLSHIVFQVSCTVR-STSKKRNIPIIVRVSDINDNAPRF-MNTPYEVTVPESTP 155

Query: 68  --RQIVK-IEATDNDLGVNAEITYSIY--HVSNTGLHKFRID---------PRSGVIETT 113
               I + I+A D D GVN  + Y I   HV+ T   KF  D         P  G + T 
Sbjct: 156 VGTTIFRNIQALDKDAGVNGLVEYFIAEGHVNATDEEKFSADGYGTFSISFPHQGQV-TV 214

Query: 114 GKLIAGEQ---YSITVQATD 130
            K +  E+   Y +T+ A+D
Sbjct: 215 AKTLDYEKIHRYYLTIIASD 234


>gi|59936685|gb|AAX12106.1| cadherin 99C [Drosophila melanogaster]
 gi|59936706|gb|AAX12107.1| cadherin 99C [Drosophila melanogaster]
          Length = 1706

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 449 LVVNEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 508

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ ATDND G NA +TYSIYHVSN G+ KF I+  +G I T G+L+AG
Sbjct: 509 TAGDQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAG 568

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 569 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 626



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q++ G+A+  +  + 
Sbjct: 671 RYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYV--FQVEEGKAQASVGVVH 728

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I T  +L   +  +Y   V A D  
Sbjct: 729 ATDADEGINAEITYSI----PTDI-PFTINATSGEILTAKELDYEQLNEYKFVVTAKDGA 783

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 784 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NFLVATV 828



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 31/187 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           LDRD  N     FQV    +  G   ++P+   V ++DINDNAPR  M  P ++   E+ 
Sbjct: 99  LDRDEENLSHIVFQVSCTTRSTGKKRTIPI--IVRVSDINDNAPRF-MNTPYEVTVPEST 155

Query: 68  ---RQIVK-IEATDNDLGVNAEITYSIYHVS--NTGLHKFRID---------PRSGVIET 112
                I + I+A D D GVN  + Y I   S  +T + K+  D         P  G + T
Sbjct: 156 PVGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQV-T 214

Query: 113 TGKLIAGEQ---YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
             K +  E+   Y +T+ A+D    T  + S T      +   N   P F    Y   VS
Sbjct: 215 VAKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSF---IYSGCVS 271

Query: 166 -EGASIN 171
            +GA IN
Sbjct: 272 LDGACIN 278


>gi|24651170|ref|NP_733314.1| cadherin 99C, isoform A [Drosophila melanogaster]
 gi|320543453|ref|NP_001189311.1| cadherin 99C, isoform B [Drosophila melanogaster]
 gi|23172606|gb|AAF56955.2| cadherin 99C, isoform A [Drosophila melanogaster]
 gi|318068893|gb|ADV37401.1| cadherin 99C, isoform B [Drosophila melanogaster]
          Length = 1706

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 449 LVVNEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 508

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ ATDND G NA +TYSIYHVSN G+ KF I+  +G I T G+L+AG
Sbjct: 509 TAGDQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAG 568

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 569 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 626



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q++ G+A+  +  + 
Sbjct: 671 RYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYV--FQVEEGKAQASVGVVH 728

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I T  +L   +  +Y   V A D  
Sbjct: 729 ATDADEGINAEITYSI----PTDI-PFTINATSGEILTAKELDYEQLNEYKFVVTAKDGA 783

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 784 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NFLVATV 828



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 31/187 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           LDRD  N     FQV    +  G   ++P+   V ++DINDNAPR  M  P ++   E+ 
Sbjct: 99  LDRDEENLSHIVFQVSCTTRSTGKKRTIPI--IVRVSDINDNAPRF-MNTPYEVTVPEST 155

Query: 68  ---RQIVK-IEATDNDLGVNAEITYSIYHVS--NTGLHKFRID---------PRSGVIET 112
                I + I+A D D GVN  + Y I   S  +T + K+  D         P  G + T
Sbjct: 156 PVGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQV-T 214

Query: 113 TGKLIAGEQ---YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
             K +  E+   Y +T+ A+D    T  + S T      +   N   P F    Y   VS
Sbjct: 215 VAKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSF---IYSGCVS 271

Query: 166 -EGASIN 171
            +GA IN
Sbjct: 272 LDGACIN 278


>gi|195341325|ref|XP_002037261.1| GM12831 [Drosophila sechellia]
 gi|194131377|gb|EDW53420.1| GM12831 [Drosophila sechellia]
          Length = 1347

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 90  LVVNEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 149

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ ATDND G NA +TYSIYHVSN G+ KF I+  +G I T G+L+AG
Sbjct: 150 TAGDQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINETTGEIRTQGRLLAG 209

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 210 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 267



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q++ G+A+  +  + 
Sbjct: 312 RYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYV--FQVEEGKAQASVGVVH 369

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I T  +L   +  +Y   V A D  
Sbjct: 370 ATDADEGINAEITYSI----PTDI-PFTINATSGEILTAKELDYEQLNEYKFVVTAKDGA 424

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 425 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NFLVATV 469


>gi|54650730|gb|AAV36944.1| LP14319p [Drosophila melanogaster]
          Length = 1691

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 434 LVVNEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 493

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ ATDND G NA +TYSIYHVSN G+ KF I+  +G I T G+L+AG
Sbjct: 494 TAGDQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAG 553

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 554 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 611



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q++ G+A+  +  + 
Sbjct: 656 RYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYV--FQVEEGKAQASVGVVH 713

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I T  +L   +  +Y   V A D  
Sbjct: 714 ATDADEGINAEITYSI----PTDI-PFTINATSGEILTAKELDYEQLNEYKFVVTAKDGA 768

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 769 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NFLVATV 813



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 31/187 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           LDRD  N     FQV    +  G   ++P+   V ++DINDNAPR  M  P ++   E+ 
Sbjct: 84  LDRDEENLSHIVFQVSCTTRSTGKKRTIPI--IVRVSDINDNAPRF-MNTPYEVTVPEST 140

Query: 68  ---RQIVK-IEATDNDLGVNAEITYSIYHVS--NTGLHKFRID---------PRSGVIET 112
                I + I+A D D GVN  + Y I   S  +T + K+  D         P  G + T
Sbjct: 141 PVGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQV-T 199

Query: 113 TGKLIAGEQ---YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
             K +  E+   Y +T+ A+D    T  + S T      +   N   P F    Y   VS
Sbjct: 200 VAKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSF---IYSGCVS 256

Query: 166 -EGASIN 171
            +GA IN
Sbjct: 257 LDGACIN 263


>gi|194906021|ref|XP_001981299.1| GG11701 [Drosophila erecta]
 gi|190655937|gb|EDV53169.1| GG11701 [Drosophila erecta]
          Length = 1705

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/178 (62%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++NLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 448 LVVNEDNLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 507

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ ATDND G NA +TYSIYHVSN G+ KF I+  +G I T G+L+AG
Sbjct: 508 TAGDQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINETTGEIRTQGRLLAG 567

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 568 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 625



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q++ G+A+  +  + 
Sbjct: 670 RYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYV--FQVEEGKAQASVGVVH 727

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I T  +L   +  +Y   V A D  
Sbjct: 728 ATDADEGINAEITYSI----PTDI-PFTINATSGEILTAKELDYEQLNEYKFVVTAKDGA 782

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 783 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NFLVATV 827



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 80/186 (43%), Gaps = 29/186 (15%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDRD  N     FQV    +  T+    + + V ++DINDNAPR  M  P ++   E+  
Sbjct: 98  LDRDEENLSHIVFQVSCTTR-STSKKRTIPIIVRVSDINDNAPRF-MNTPYEVTVPESTP 155

Query: 68  --RQIVK-IEATDNDLGVNAEITYSIYHVS--NTGLHKFRID---------PRSGVIETT 113
               I + I+A D D GVN  + Y I   S  +T   K+  D         P  G + T 
Sbjct: 156 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSANSTDAEKYSADGYGTFAISFPHQGQV-TV 214

Query: 114 GKLIAGEQ---YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS- 165
            K +  E+   Y +T+ A+D    T  + S T      +   N   P F    Y   VS 
Sbjct: 215 AKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSF---IYSGCVSL 271

Query: 166 EGASIN 171
           +GA IN
Sbjct: 272 DGACIN 277


>gi|347967593|ref|XP_312660.5| AGAP002310-PA [Anopheles gambiae str. PEST]
 gi|333468389|gb|EAA07876.6| AGAP002310-PA [Anopheles gambiae str. PEST]
          Length = 1762

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 109/176 (61%), Positives = 134/176 (76%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L V++E LDRDPP+PGK+ FQV+ARE  G AAS P+SLTV+L D+NDNAPRL M+ P+ +
Sbjct: 464 LRVNEEGLDRDPPSPGKYLFQVVAREASGNAASAPMSLTVHLRDVNDNAPRLAMVAPVTL 523

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            AG+ RR + ++ ATDND   NA ITYSI+HVSN G  KF IDP +G IET  +L AGEQ
Sbjct: 524 MAGDGRRLVTQVHATDNDAAENAAITYSIFHVSNNGASKFGIDPATGEIETRTRLNAGEQ 583

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           YSITVQA+D GG SSQ IVEV++ PGPNT+ P F +  Y+V VSEGA INSTV  +
Sbjct: 584 YSITVQASDVGGLSSQAIVEVTITPGPNTKPPRFARPVYEVQVSEGAEINSTVIVL 639



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 15/155 (9%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I R +     +   ++ + + DIND  P     +LP +    +  G     I  + 
Sbjct: 684 RYQLIVRAEDNGGLASSATVNIKVTDINDKNPEFDERQLPYV--FAVDEGRENVSIGTVR 741

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           ATD D G+NAEITY++          FRID R+G + T   L   +Q  Y   V A D  
Sbjct: 742 ATDADEGMNAEITYTV-----PSDIPFRIDSRTGEVRTKVALDYEKQKEYRFVVTAKDGA 796

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            +       V+V V       P F ++T ++ V E
Sbjct: 797 PEPRLGTASVTVKVRDVADEVPRFMESTVEIKVPE 831


>gi|195503140|ref|XP_002098526.1| GE23891 [Drosophila yakuba]
 gi|194184627|gb|EDW98238.1| GE23891 [Drosophila yakuba]
          Length = 1705

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 111/178 (62%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++NLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 448 LVVNEDNLDRDPPAPGRFKFQVVAREPKTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 507

Query: 62  QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+    R + ++ A+DND G NA +TYSIYHVSN G+ KF I+  +G I T G+L+AG
Sbjct: 508 TAGDQSESRLVTQVTASDNDEGPNAVVTYSIYHVSNNGIQKFTINETTGEIRTQGRLLAG 567

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 568 EQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 625



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P      LP +   Q++ G+A+  +  + 
Sbjct: 670 RYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYV--FQVEEGKAQASVGVVH 727

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG I T  +L   +  +Y   V A D  
Sbjct: 728 ATDADEGINAEITYSI----PTDI-PFTINATSGEILTAKQLDYEQLNEYKFVVTAKDGA 782

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V V+  P+   P F     DV++ E    N  VAT+
Sbjct: 783 PDARLGTASVTVMVLDLPD-EVPKFSDARIDVHIPENEE-NYLVATV 827



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 81/186 (43%), Gaps = 29/186 (15%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDRD  N     FQV    +  T+    + + V ++DINDNAPR  M  P ++   E+  
Sbjct: 98  LDRDEENLSHIVFQVSCTTR-STSKKRTIPIIVRVSDINDNAPRF-MNTPYEVTVPESTP 155

Query: 68  --RQIVK-IEATDNDLGVNAEITYSIYHVS--NTGLHKFRID---------PRSGVIETT 113
               I + I+A D D GVN  + Y I   S  +T + K+  D         P  G + T 
Sbjct: 156 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTDVEKYSADGYGTFAISFPHQGQV-TV 214

Query: 114 GKLIAGEQ---YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS- 165
            K +  E+   Y +T+ A+D    T  + S T      V   N   P F    Y   VS 
Sbjct: 215 AKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNVADSNDLDPSF---IYSGCVSL 271

Query: 166 EGASIN 171
           +GA IN
Sbjct: 272 DGACIN 277


>gi|225581190|gb|ACN94758.1| GA15934 [Drosophila miranda]
          Length = 1722

 Score =  221 bits (564), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 111/180 (61%), Positives = 135/180 (75%), Gaps = 4/180 (2%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++NLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L DINDNAP+L M+ PI I
Sbjct: 450 LVVNEDNLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDINDNAPKLAMVSPIAI 509

Query: 62  QAGEA----RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            A        R + ++ A DND G NA + YSIYHVSN G+ KF ID ++G I T G+L+
Sbjct: 510 TANSGDQSESRLVTQVTAIDNDEGPNAVVAYSIYHVSNNGIQKFTIDEQTGEIRTHGRLL 569

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           AGEQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 570 AGEQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 629



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I R +     S   ++ + + DIND  P      LP +   Q+  G A   +  + 
Sbjct: 674 RYQLIMRAEDSGGLSSSATVNIKVTDINDKNPEFDVSTLPYV--FQVDEGTADAFVGVVH 731

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG + T  +L      +Y   V A D  
Sbjct: 732 ATDADEGINAEITYSI----PTDV-PFTINGTSGELRTASQLDYERLNEYKFVVTAKDGA 786

Query: 133 -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                G +S T++ V  +P      P F     DV++ E
Sbjct: 787 PDARLGTASVTVL-VHDIPD---EVPKFSDARIDVHIPE 821



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           LDRD  N     FQV    +      ++P+   V ++DINDNAPR  M  P ++   E+ 
Sbjct: 99  LDRDEENLSHIVFQVSCTIRSSNKKRNIPI--IVRVSDINDNAPRF-MNTPYEVTVPEST 155

Query: 68  ---RQIVK-IEATDNDLGVNAEITYSIYH-----------VSNTGLHKFRID-PRSGVIE 111
                I + I+A D D GVN  + Y I              S  G   F I  P  G + 
Sbjct: 156 PVGTTIFRNIQALDKDAGVNGLVEYFIAEQSINATEDEKLTSADGYGTFAISFPHQGQV- 214

Query: 112 TTGKLIAGEQ---YSITVQATD 130
           T  K++  E+   Y +T+ A+D
Sbjct: 215 TVSKILDYEKVQRYFVTIVASD 236


>gi|125772752|ref|XP_001357648.1| GA15934 [Drosophila pseudoobscura pseudoobscura]
 gi|54637380|gb|EAL26782.1| GA15934 [Drosophila pseudoobscura pseudoobscura]
          Length = 1722

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 111/180 (61%), Positives = 135/180 (75%), Gaps = 4/180 (2%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++NLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L DINDNAP+L M+ PI I
Sbjct: 450 LVVNEDNLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDINDNAPKLAMVSPIAI 509

Query: 62  QAGEA----RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            A        R + ++ A DND G NA + YSIYHVSN G+ KF ID ++G I T G+L+
Sbjct: 510 TANSGDQSESRLVTQVTAIDNDEGPNAVVAYSIYHVSNNGIQKFTIDEQTGEIRTHGRLL 569

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           AGEQYSITVQATD GG SSQ IVEVSV PGPNT+ P FQ+  Y+V VSEGA INSTV  +
Sbjct: 570 AGEQYSITVQATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVV 629



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----LPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I R +     S   ++ + + DIND  P      LP +   Q+  G A   +  + 
Sbjct: 674 RYQLIMRAEDSGGLSSSATVNIKVTDINDKNPEFDVSTLPYV--FQVDEGTADAFVGVVH 731

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D G+NAEITYSI     T +  F I+  SG + T  +L      +Y   V A D  
Sbjct: 732 ATDADEGINAEITYSI----PTDV-PFTINGTSGELRTASQLDYERLNEYKFVVTAKDGA 786

Query: 133 -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                G +S T++ V  +P      P F     DV++ E
Sbjct: 787 PDARLGTASVTVL-VHDIPD---EVPKFSDARIDVHIPE 821



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           LDRD  N     FQV    +      ++P+   V ++DINDNAPR  M  P ++   E+ 
Sbjct: 99  LDRDEENLSHIVFQVSCTIRSSNKKRNIPI--IVRVSDINDNAPRF-MNTPYEVTVPEST 155

Query: 68  ---RQIVK-IEATDNDLGVNAEITYSIYH-----------VSNTGLHKFRID-PRSGVIE 111
                I + I+A D D GVN  + Y I              S  G   F I  P  G + 
Sbjct: 156 PVGTTIFRNIQALDKDAGVNGLVEYFIAEQSINATEDEKLTSADGYGTFAISFPHQGQV- 214

Query: 112 TTGKLIAGEQ---YSITVQATD 130
           T  K++  E+   Y +T+ A+D
Sbjct: 215 TVSKILDYEKVQRYFVTIVASD 236


>gi|195389138|ref|XP_002053234.1| GJ23774 [Drosophila virilis]
 gi|194151320|gb|EDW66754.1| GJ23774 [Drosophila virilis]
          Length = 1731

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 107/178 (60%), Positives = 136/178 (76%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V++E LDRDPP PG+++FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 454 LIVNEEGLDRDPPAPGRYKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 513

Query: 62  QAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+   Q  + ++ ATD D G NA +TYSIYHVSN G+ KF I+ ++G I+T G+L+AG
Sbjct: 514 SAGDQHEQRLVAQMMATDIDEGANAVVTYSIYHVSNNGMQKFHINEQTGEIQTRGRLLAG 573

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEV+V PGPNT+ P F    Y+V VSEGA INSTV  +
Sbjct: 574 EQYSITVQATDIGGLSSQAIVEVTVTPGPNTKPPRFTHMLYEVQVSEGAEINSTVTVV 631



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 10/131 (7%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKIEAT 76
           R+Q++ + +     S   ++ + + DIND  P    I       +  G     +  + AT
Sbjct: 676 RYQLVVKAEDNGGLSSSATVNIKVTDINDKNPEFDEITQPYVFHVDEGLQDAFVGIVHAT 735

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           D D GVNAEITYSI     T +  F I+ +SG I T+ KL      +Y   V A D    
Sbjct: 736 DADEGVNAEITYSI----PTDI-PFSINNKSGEIRTSDKLDFERLNEYKFVVTAKDGAPD 790

Query: 135 SSQTIVEVSVV 145
           +      V+VV
Sbjct: 791 ARLGTASVTVV 801



 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA- 66
           LDRD  N     FQV    ++     ++P+   V ++D+NDNAP   M  P +I   E+ 
Sbjct: 103 LDRDEENLSHIVFQVSCTIRESNKKRNIPI--IVRVSDVNDNAPHF-MNTPYEITVPEST 159

Query: 67  ---RRQIVKIEATDNDLGVNAEITYSI 90
                    I+A D D GVN  + Y I
Sbjct: 160 PLGTTVYRNIQALDKDAGVNGLVEYFI 186


>gi|195108383|ref|XP_001998772.1| GI23447 [Drosophila mojavensis]
 gi|193915366|gb|EDW14233.1| GI23447 [Drosophila mojavensis]
          Length = 1684

 Score =  219 bits (558), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/178 (60%), Positives = 135/178 (75%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V++E LDRDPP PG+++FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ P+ I
Sbjct: 419 LIVNEEGLDRDPPAPGRYKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPVSI 478

Query: 62  QAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+   Q  + ++ ATD D G NA +TYSIYHVSN GL KF I+ ++G I T G+L+AG
Sbjct: 479 SAGDEHEQRLVAQMMATDIDEGPNAVVTYSIYHVSNNGLQKFHINEQTGEIHTQGRLLAG 538

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQATD GG SSQ IVEV+V PGPNT+ P F    Y+V VSEGA INSTV  +
Sbjct: 539 EQYSITVQATDIGGLSSQAIVEVTVTPGPNTKPPRFTNALYEVQVSEGAEINSTVTVV 596



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 10/131 (7%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKIEAT 76
           R+Q+I + +     S   ++ + + DIND  P    +       +  G     +  + AT
Sbjct: 641 RYQLIVKAEDNGGLSSSATVNIKVTDINDKNPEFDELTQPYVFHVDEGLDDAFVGIVHAT 700

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           D D G+NAEITYSI     T +  F I+ +SG I T+ KL      +Y   V A D    
Sbjct: 701 DADEGINAEITYSI----PTDI-PFSINNKSGEIRTSDKLDYERLSEYKFVVTAKDGAPD 755

Query: 135 SSQTIVEVSVV 145
           +      V+V+
Sbjct: 756 ARLGTASVTVI 766



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA-- 66
           LDRD  N     FQV    ++       + L V ++D+NDNAP   M  P +I   E+  
Sbjct: 68  LDRDEENLSHIVFQVSCTIRESNKKR-NIPLIVRVSDVNDNAPHF-MNTPYEITVPESTP 125

Query: 67  --RRQIVKIEATDNDLGVNAEITYSI 90
                   I+A D D GVN  + Y I
Sbjct: 126 LGTTVYRNIQALDKDAGVNGLVEYFI 151


>gi|195054108|ref|XP_001993968.1| GH18138 [Drosophila grimshawi]
 gi|193895838|gb|EDV94704.1| GH18138 [Drosophila grimshawi]
          Length = 1728

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 107/178 (60%), Positives = 136/178 (76%), Gaps = 2/178 (1%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V +E LDRDPP PG+++FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 457 LIVYEEGLDRDPPAPGRYKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 516

Query: 62  QAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            AG+   Q  + ++ ATD D G NA +TYSIYHVSN G+ KF+I+ ++G IET G+L+AG
Sbjct: 517 SAGDQHEQRLVTQMMATDIDEGPNAVVTYSIYHVSNNGMQKFKINEQTGEIETQGRLLAG 576

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           EQYSITVQA+D GG SSQ IVEV+V PGPNT+ P F    Y+V VSEGA INSTV  +
Sbjct: 577 EQYSITVQASDIGGLSSQAIVEVTVTPGPNTKPPRFTNVLYEVQVSEGAEINSTVTVV 634



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 14/133 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIE 74
           R+Q+I + +     S   ++ + + DIND  P       P +    +  G+    +  + 
Sbjct: 679 RYQLIVKAEDNGGLSSTATVNIKVTDINDKNPEFDELNQPYV--FHVDEGKDDAFVGIVH 736

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
           ATD D GVNAEITYSI     T +  F I+ +SG I T+ +L      +Y   V A D  
Sbjct: 737 ATDADEGVNAEITYSI----PTDI-PFAINGKSGEIRTSNELDYERVNEYKFVVTAKDGA 791

Query: 133 GKSSQTIVEVSVV 145
             +      V+V+
Sbjct: 792 PDARLGTASVTVI 804



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA-- 66
           LDRD  N     FQV    ++ T     + L V ++D+NDNAP+  M  P ++   E+  
Sbjct: 106 LDRDEENLSHIVFQVSCTIRE-TNKKRNIPLIVRVSDVNDNAPQF-MNTPYEVTVPESTP 163

Query: 67  --RRQIVKIEATDNDLGVNAEITYSIYH-----------VSNTGLHKFRID-PRSGVIET 112
                   I+A D D GVN  + Y I              S  G   F I  P  G + T
Sbjct: 164 LGTTVFRNIQAVDKDAGVNGLVEYFIVKGNTNTTEDEKLTSADGYGSFAISFPHQGQV-T 222

Query: 113 TGKLIAGEQ---YSITVQATDTGGKSSQTI 139
             K +  E+   Y +T+ A+D     S+ +
Sbjct: 223 VAKTLDYEKIQRYYLTIVASDRARSVSERL 252


>gi|312385778|gb|EFR30197.1| hypothetical protein AND_00373 [Anopheles darlingi]
          Length = 1232

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 105/176 (59%), Positives = 131/176 (74%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L V++E LDRDPP+  ++ FQV+ARE  G AAS P+S+TV L D+NDNAPRL M+  + +
Sbjct: 247 LRVNEEGLDRDPPSQERYLFQVVAREATGNAASAPLSVTVVLRDVNDNAPRLAMVASVTL 306

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            AG+ RR + K+ ATDND   NA ITYSI+HVSN G  KF IDP++G IET  +L AGEQ
Sbjct: 307 MAGDGRRLVTKVHATDNDAAENALITYSIFHVSNNGASKFAIDPKTGEIETRTRLNAGEQ 366

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           YSITVQA+D GG SSQ IVEV++ PGPNT+ P F +  Y+V VSEGA INSTV  +
Sbjct: 367 YSITVQASDVGGLSSQAIVEVTITPGPNTKPPRFAKPVYEVQVSEGAEINSTVLVL 422



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 23/159 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIE 74
           R+Q+I R +     +   ++ + + DIND  P     +LP +    +  G+    I  + 
Sbjct: 467 RYQLIVRAEDNGGLASSATVNIRVTDINDKNPEFDERKLPYV--FAVDEGQEGVAIGTVH 524

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           ATD D G+NAEI+Y+I          FRID R+G I T   L   +Q  Y   V A D  
Sbjct: 525 ATDADEGMNAEISYTI-----PSDIPFRIDSRTGEIRTKLALDYEKQKEYKFVVTAKDGA 579

Query: 133 -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                G +S T V+V  +P      P F ++T +V + E
Sbjct: 580 PEPRLGTASVT-VKVRDIPD---EVPRFMESTVEVRIPE 614


>gi|391337562|ref|XP_003743136.1| PREDICTED: protocadherin Fat 2-like [Metaseiulus occidentalis]
          Length = 1401

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 89/180 (49%), Positives = 123/180 (68%), Gaps = 3/180 (1%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLPMIP 57
           +LVV +  LDRD PNP  + F+V A+E    +G   S P+ L V+LNDINDN+P LP+I 
Sbjct: 433 FLVVGEPQLDRDSPNPNVYEFEVQAKEVGTPEGRGLSRPIQLRVHLNDINDNSPVLPLIN 492

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P+ +++G+  R + K+EA DND G NA++TYSIYH+SN G  +F IDP +G ++    + 
Sbjct: 493 PVTLESGDGVRTVTKVEAADNDEGENAKLTYSIYHISNNGAARFTIDPETGDLKVRTPVD 552

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           AGEQ+SITVQATD GG  SQ I+EV V+PGPN   P+F Q  Y  +V+EG+ +   V T+
Sbjct: 553 AGEQFSITVQATDAGGLYSQGIIEVMVIPGPNLGGPIFLQEEYRASVAEGSPVGVPVTTV 612



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           V L V + DIND  P       + ++  G A   + +++A+D DLG NAEITYSI   ++
Sbjct: 674 VPLIVTVTDINDETPVFTENRYVFEVAEGLANTFVGQVKASDRDLGGNAEITYSIEDPAS 733

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           T    F I+  +G I T   L   + +++ + V ATD G  +    VEV++ V       
Sbjct: 734 T----FAINGANGSIYTRRALDFESEKEFVVIVTATDHGENALSAKVEVNIRVLDEQDEV 789

Query: 153 PVFQQNTYDVNVSE 166
           P+F+Q+ YDV V+E
Sbjct: 790 PIFEQSHYDVKVNE 803



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 11/146 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPI 59
           +V ++ LDRD  +    R Q+    K  +   V V + V +ND+NDNAP+         I
Sbjct: 90  LVLQKPLDRDAEDLASVRVQIRCEAKDQSRKKV-VQVLVRVNDVNDNAPQFTSENYTTSI 148

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT--GLHKFRID-PRSGVIETTGKL 116
             +A           ATD+D GVN  + Y I    N       F ID P  G++ T  K 
Sbjct: 149 SEEAPVGTMVFANFTATDSDSGVNGLVEYFIEETGNADDAASYFSIDSPHQGIV-TIKKP 207

Query: 117 IAGEQ---YSITVQATDTGGKSSQTI 139
           +  EQ   Y + V A D   K S  +
Sbjct: 208 LDYEQSKAYLLRVIAADRAMKPSDRL 233



 Score = 38.9 bits (89), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 9/113 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +  ++A D + GV   + YSI  V       F ID  +G +   G+L   A E Y++T++
Sbjct: 609 VTTVKANDPERGV---VYYSI--VDGNTNEAFSIDQETGTVFVIGRLDREAKETYNLTLK 663

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D+G +    +  +  V   N  +PVF +N Y   V+EG + N+ V  +  S
Sbjct: 664 AADSG-ELYNLVPLIVTVTDINDETPVFTENRYVFEVAEGLA-NTFVGQVKAS 714



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR-----------RQIVKIEATDND 79
            +A+ +   LTVNL D+NDN P   + P +    G +             +++ + A D D
Sbjct: 1093 SASRLTAQLTVNLRDVNDNRPNFIISPMVADPTGNSYLGALDIDSAVGTEVITVTAEDMD 1152

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
               N  ++Y I   +N G   F+ID  +G I +
Sbjct: 1153 SEGNGRVSYEIVPETNKG-EFFKIDSNTGAISS 1184


>gi|322786605|gb|EFZ13000.1| hypothetical protein SINV_09566 [Solenopsis invicta]
          Length = 1023

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 100/119 (84%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
             ++EATDND G NAEITYSIYHVSN G HKF+IDP++GVIE+  KL AGEQYSITVQAT
Sbjct: 5   FTQVEATDNDEGENAEITYSIYHVSNNGFHKFKIDPKTGVIESVRKLNAGEQYSITVQAT 64

Query: 130 DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
           D GGK SQTIVEV+V+PGPNTRSPVFQQ  Y+V VSEGASINSTVATITVS L    AI
Sbjct: 65  DKGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATITVSILDMMPAI 123



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 12/116 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           R+Q++ + +         ++ + + DIND  P    +P    ++ GEAR+ I ++ A D 
Sbjct: 165 RYQLLIKAEDTGGLYSTATVNIMVTDINDKNPEFVGLPYEFTVKEGEARKLIGRVHAEDA 224

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATD 130
           D G+NAEITY  +   +     F +DP +G + T  K++      ++Y   V A D
Sbjct: 225 DEGINAEITY--FAPDDI---PFTVDPETGDVLT--KIVLDYEQNDEYKFVVTARD 273


>gi|321472651|gb|EFX83620.1| hypothetical protein DAPPUDRAFT_301624 [Daphnia pulex]
          Length = 1627

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 124/174 (71%), Gaps = 1/174 (0%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           V+  NLDRD PNP    FQ IAR K G A + P+++++ L D+NDNAPR P   P+ +QA
Sbjct: 495 VAVPNLDRDAPNPSTLTFQAIAR-KAGGATTSPIAISIRLLDVNDNAPRFPSFKPVFLQA 553

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
           G++++ + +++A D D   N  I Y++  V+N G +KF I+P++GVI++ G L  GE+Y+
Sbjct: 554 GDSKKVVTQVQAEDKDWADNGRIEYAVVDVTNNGKNKFVINPQTGVIDSAGALKPGEKYT 613

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +T+QATD GGKSS  ++EV ++PGPN ++PVF +++Y+++V EG+ +NS V T 
Sbjct: 614 LTLQATDGGGKSSLGLLEVIIIPGPNIQAPVFTKDSYEISVDEGSPVNSLVYTF 667



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVK-IEATDND-LGVNAEITYSIYHVS 94
            +L VN+ D ND AP    +P P+++++     Q+V  + A D+D    N  + Y + + S
Sbjct: 933  TLFVNVQDRNDVAPVYSSLPRPVRLRSTVPVGQVVTTVIAVDSDGTSPNNHVRYELVNNS 992

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIV--------EVSV 144
            N     FRI+P SGVI T   L      +Y + ++A D G  +S + +         V+ 
Sbjct: 993  NKVGQFFRINPESGVISTRDSLRKDNEREYKLRIRAYDLGKPTSLSTLATVIVLVDHVAP 1052

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +  P+     F + TY V+V+E A  N+ +  ++V
Sbjct: 1053 LIHPDVTHMSFSEMTYSVSVAEDALANTLIKNLSV 1087



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 7/87 (8%)

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTI 139
           N  +TYSI  V+   L  F+++  +G +    K I  EQ   Y +TV+A DTGG SS   
Sbjct: 674 NDRVTYSI--VAGNELGHFKMEKSNGSL-LLAKPIDREQLSRYVLTVRAEDTGGLSSVAQ 730

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           V V V+   N RSP F    Y   V E
Sbjct: 731 VMVRVL-DTNDRSPEFIDLPYIFRVKE 756


>gi|357620011|gb|EHJ72353.1| putative cadherin [Danaus plexippus]
          Length = 622

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 96/178 (53%), Gaps = 50/178 (28%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YLVVS + LDRDPPN  + RFQ                                      
Sbjct: 443 YLVVSDDRLDRDPPNKDRLRFQ-------------------------------------- 464

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                       +EATD D G NA I+YSIYHVSN G +KF IDP +GVI +TG+L AGE
Sbjct: 465 ------------VEATDIDEGENARISYSIYHVSNNGGNKFTIDPNTGVISSTGRLQAGE 512

Query: 121 QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           QYS+TV+A D+   SSQ I+E+ V PGPNTR P F    Y   VSEGA+INSTV T+T
Sbjct: 513 QYSVTVRAADSKRLSSQGIIELVVAPGPNTRPPQFSSRDYFAPVSEGAAINSTVTTVT 570


>gi|195159268|ref|XP_002020504.1| GL14030 [Drosophila persimilis]
 gi|194117273|gb|EDW39316.1| GL14030 [Drosophila persimilis]
          Length = 576

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 4/111 (3%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++NLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L DINDNAP+L M+ PI I
Sbjct: 450 LVVNEDNLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDINDNAPKLAMVSPIAI 509

Query: 62  QAGEA----RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
            A        R + ++ A DND G NA + YSIYHVSN G+ KF ID ++G
Sbjct: 510 TANSGDQSESRLVTQVTAIDNDEGPNAVVAYSIYHVSNNGIQKFTIDEQTG 560



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           LDRD  N     FQV    +      ++P+   V ++DINDNAPR  M  P ++   E+ 
Sbjct: 99  LDRDEENLSHIVFQVSCTIRSSNKKRNIPI--IVRVSDINDNAPRF-MNTPYEVTVPEST 155

Query: 68  ---RQIVK-IEATDNDLGVNAEITYSIYH-----------VSNTGLHKFRID-PRSGVIE 111
                I + I+A D D GVN  + Y I              S  G   F I  P  G + 
Sbjct: 156 PVGTTIFRNIQALDKDAGVNGLVEYFIAEQNINATEDEKLTSADGYGTFAISFPHQGQV- 214

Query: 112 TTGKLIAGEQ---YSITVQATD 130
           T  K++  E+   Y +T+ A+D
Sbjct: 215 TVSKILDYEKVQRYFVTIVASD 236


>gi|312073442|ref|XP_003139522.1| hypothetical protein LOAG_03937 [Loa loa]
          Length = 1277

 Score =  105 bits (263), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 3/149 (2%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPM-IP 57
           Y+ ++  ++D DPPNP  ++  + ARE   T   +S P+S+ +++ DINDN PR    + 
Sbjct: 92  YVYLNVPHIDADPPNPSAYQLHIEAREVNTTPIRSSEPISVIIHVMDINDNPPRFSSSVY 151

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              I A  A R ++KI ATDND G N +I+Y +  VS    + F+ D  +  +   G L 
Sbjct: 152 MANISASGADRPVIKIHATDNDTGKNGQISYHLVSVSGEAYNNFQYDSYAHQLNAVGNLK 211

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVP 146
           AGE+Y + ++A D GG SSQT++ V  VP
Sbjct: 212 AGERYEVVLKAIDGGGLSSQTLIIVYAVP 240


>gi|393906361|gb|EJD74255.1| cadherin domain-containing protein [Loa loa]
          Length = 626

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 3/149 (2%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTA--ASVPVSLTVNLNDINDNAPRLPM-IP 57
           Y+ ++  ++D DPPNP  ++  + ARE   T   +S P+S+ +++ DINDN PR    + 
Sbjct: 92  YVYLNVPHIDADPPNPSAYQLHIEAREVNTTPIRSSEPISVIIHVMDINDNPPRFSSSVY 151

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              I A  A R ++KI ATDND G N +I+Y +  VS    + F+ D  +  +   G L 
Sbjct: 152 MANISASGADRPVIKIHATDNDTGKNGQISYHLVSVSGEAYNNFQYDSYAHQLNAVGNLK 211

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVP 146
           AGE+Y + ++A D GG SSQT++ V  VP
Sbjct: 212 AGERYEVVLKAIDGGGLSSQTLIIVYAVP 240


>gi|195574873|ref|XP_002105408.1| GD21473 [Drosophila simulans]
 gi|194201335|gb|EDX14911.1| GD21473 [Drosophila simulans]
          Length = 455

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 2/82 (2%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV++ENLDRDPP PG+F+FQV+ARE +  AAS P+SLTV+L D+NDNAP+L M+ PI I
Sbjct: 370 LVVNEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISI 429

Query: 62  QAGE--ARRQIVKIEATDNDLG 81
            AG+    R + ++ ATDND G
Sbjct: 430 TAGDQSESRLVTQVTATDNDEG 451


>gi|341901481|gb|EGT57416.1| hypothetical protein CAEBREN_30656, partial [Caenorhabditis
           brenneri]
          Length = 1294

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 7/145 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPP 58
           Y+ ++   +D DPPNP  ++  V ARE     T  S PV++T+++ D+NDN+P+     P
Sbjct: 110 YVYLNVPKIDADPPNPSTYQLNVEAREVNTIPTRRSEPVTITIHILDVNDNSPQFEQ--P 167

Query: 59  IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           I +    A+   R +VK+ ATD D G   +++Y+I  V+N    KFR +P + ++  TG 
Sbjct: 168 IYMANTTAQGEERDVVKVVATDVDSGAFGQVSYAIAQVTNGAEEKFRYEPATNMLVATGP 227

Query: 116 LIAGEQYSITVQATDTGGKSSQTIV 140
           L AGE+Y + ++ATD GG+SSQ IV
Sbjct: 228 LQAGERYQVVIEATDGGGRSSQAIV 252


>gi|341889152|gb|EGT45087.1| hypothetical protein CAEBREN_28687 [Caenorhabditis brenneri]
          Length = 1453

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 7/147 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPP 58
           Y+ ++   +D DPPNP  ++  V ARE     T  S PV++T+++ D+NDN+P+     P
Sbjct: 110 YVYLNVPKIDADPPNPSTYQLNVEAREVNTIPTRRSEPVTITIHILDVNDNSPQFEQ--P 167

Query: 59  IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           I +    A+   R +VK+ ATD D G   +++Y+I  V+N    KFR +P + ++  TG 
Sbjct: 168 IYMANTTAQGEERDVVKVVATDVDSGAFGQVSYAIAQVTNGAEDKFRYEPATNMLVATGP 227

Query: 116 LIAGEQYSITVQATDTGGKSSQTIVEV 142
           L AGE+Y + ++ATD GG+SSQ IV V
Sbjct: 228 LQAGERYQVVIEATDGGGRSSQAIVIV 254


>gi|308470294|ref|XP_003097381.1| CRE-CDH-5 protein [Caenorhabditis remanei]
 gi|308240230|gb|EFO84182.1| CRE-CDH-5 protein [Caenorhabditis remanei]
          Length = 1547

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 7/147 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPP 58
           Y+ ++   +D DPPNP  ++  V ARE     T  S PV++T+++ D+NDN+P+     P
Sbjct: 171 YVYLNVPKIDADPPNPSTYQLNVEAREVNTIPTRRSDPVTITIHILDVNDNSPQFEQ--P 228

Query: 59  IQIQ---AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           I +    A    R +V++ ATD D G   ++TY+I  V+N    KFR +P + ++  TG 
Sbjct: 229 IYMANTTANGEERDVVRVVATDVDSGAFGQVTYAIAQVTNGAEDKFRYEPATNMLLATGH 288

Query: 116 LIAGEQYSITVQATDTGGKSSQTIVEV 142
           L  GE+Y + ++ATD GG+SSQ IV V
Sbjct: 289 LTPGERYQVVIEATDGGGRSSQAIVIV 315


>gi|17539702|ref|NP_501486.1| Protein CDH-5, isoform a [Caenorhabditis elegans]
 gi|351060022|emb|CCD67647.1| Protein CDH-5, isoform a [Caenorhabditis elegans]
          Length = 1544

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 9/147 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPP 58
           YL V K  +D DPPNP  ++  V ARE     T  S PV++T+++ DINDN+P+     P
Sbjct: 55  YLNVPK--IDADPPNPSTYQLNVEAREVNTVPTRRSEPVTITIHILDINDNSPQFEQ--P 110

Query: 59  IQIQ---AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           I +    A    R +VK+ ATD D G   ++TY+I  V+N G  KFR +  + ++  TG 
Sbjct: 111 IYMANTTASGDERDVVKVVATDVDSGAFGQVTYTIAQVTNGGEDKFRYETATNMLVATGN 170

Query: 116 LIAGEQYSITVQATDTGGKSSQTIVEV 142
           L+ GE+Y + ++A D GG+SSQ IV V
Sbjct: 171 LVPGERYQVVIEAIDGGGRSSQAIVIV 197


>gi|17539700|ref|NP_501487.1| Protein CDH-5, isoform b [Caenorhabditis elegans]
 gi|351060023|emb|CCD67648.1| Protein CDH-5, isoform b [Caenorhabditis elegans]
          Length = 1306

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 9/147 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPP 58
           YL V K  +D DPPNP  ++  V ARE     T  S PV++T+++ DINDN+P+     P
Sbjct: 55  YLNVPK--IDADPPNPSTYQLNVEAREVNTVPTRRSEPVTITIHILDINDNSPQFEQ--P 110

Query: 59  IQIQ---AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           I +    A    R +VK+ ATD D G   ++TY+I  V+N G  KFR +  + ++  TG 
Sbjct: 111 IYMANTTASGDERDVVKVVATDVDSGAFGQVTYTIAQVTNGGEDKFRYETATNMLVATGN 170

Query: 116 LIAGEQYSITVQATDTGGKSSQTIVEV 142
           L+ GE+Y + ++A D GG+SSQ IV V
Sbjct: 171 LVPGERYQVVIEAIDGGGRSSQAIVIV 197


>gi|268569702|ref|XP_002648317.1| C. briggsae CBR-CDH-5 protein [Caenorhabditis briggsae]
          Length = 1529

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 5/146 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRL--PMI 56
           Y+ ++   +D DPPNP  ++  V ARE     T  S PV++T+++ D+NDN+P+   P+ 
Sbjct: 126 YVYLNVPKIDADPPNPSTYQLNVEAREVNTIPTRRSDPVTITIHILDVNDNSPQFEQPIY 185

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
                 +GE  R +V++ ATD D G   +++Y+I  V+N    KFR +  + ++  TG L
Sbjct: 186 MANTTASGE-ERDVVRVVATDVDSGAFGQVSYAIAQVTNGAEDKFRYESATNMLLATGNL 244

Query: 117 IAGEQYSITVQATDTGGKSSQTIVEV 142
           +AGE+Y + ++ATD GG+SSQ IV V
Sbjct: 245 VAGERYQVVIEATDGGGRSSQAIVIV 270


>gi|170588525|ref|XP_001899024.1| Cadherin domain containing protein [Brugia malayi]
 gi|158593237|gb|EDP31832.1| Cadherin domain containing protein [Brugia malayi]
          Length = 1276

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 88/150 (58%), Gaps = 4/150 (2%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPM-IP 57
           Y+ ++   +D DPPNP  ++  + ARE   T   +S P+S+ +++ DINDN PR    I 
Sbjct: 91  YVYLNVPYIDADPPNPSTYQLHIEAREVNTTPTRSSEPISVIIHVMDINDNPPRFSSSIY 150

Query: 58  PIQIQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
              + A G   R ++KI ATDND G NA+I+Y +  +S+   + F  D ++  +   G L
Sbjct: 151 TANVSANGTIDRPVIKIHATDNDTGKNAQISYHLVSISDGAYNNFWYDSKAHQLNAVGNL 210

Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            AGE+Y + ++ATD GG S+Q ++ V  VP
Sbjct: 211 KAGERYEVILRATDGGGLSNQALIIVYSVP 240


>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
          Length = 4724

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 15/192 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMI 56
            +VV +++LDR+  +  + R Q   R  Q  A S  V LT+ + D+NDNAP        + 
Sbjct: 3186 VVVLEKSLDRESRDSYRVRVQATDRAGQQGALSSQVDLTILVLDVNDNAPVFQRRDYAVT 3245

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P  +  G    ++V++ AT  D+G NAEITY+I   S   L KF ID + G I     L
Sbjct: 3246 VPEDVAVGT---EVVRVLATSADIGPNAEITYNIR--SGNELGKFTIDRKWGSISVADDL 3300

Query: 117  I--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 + Y +T++A D G    S+ T+V + ++   N  +P F Q+ Y++ VSE AS+  
Sbjct: 3301 DFEVCKDYYLTIEAWDNGNPPLSTATMVTIELM-DVNDNAPAFSQDIYNLLVSEDASVGQ 3359

Query: 173  TVATITVSRLAS 184
            TV  +    L S
Sbjct: 3360 TVTRVVAEDLDS 3371



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 10/178 (5%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE 65
            + LDR+ P        V+A +  G A+   V   V L D NDNAPR   +   + I+A  
Sbjct: 2542 QKLDRENPFNRDMVLTVMALDGGGRASFCTVR--VVLADENDNAPRFRAVEYRMSIKANV 2599

Query: 66   ARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKL--IAGEQ 121
            A+  +V +I+ATD D G N  ITYS+Y  +   L     ++P SG + T   +  + G  
Sbjct: 2600 AKGSLVTQIQATDPDAGSNGRITYSLYSEARLSLVDVLEVEPDSGWMMTKSTVDHLQGTV 2659

Query: 122  YSITVQATDTGGKSSQTIVE--VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             S  V+ATD G  +  ++V   + VVP P+   P F Q  Y   + E  ++ + + ++
Sbjct: 2660 LSFFVKATDGGSPAKHSLVSAFIHVVP-PDAFVPSFSQPQYSFTIPEDTAVGTALGSV 2716



 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 12/154 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V++ D NDN P  P +   +I   E  R      + ++ A D D G N  ITYSI 
Sbjct: 1215 VWVIVHVQDENDNPPTFPEVT-YRISLPERDRNKRGEPVYRVFAYDRDYGANGNITYSI- 1272

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV----VPG 147
             +S     KF IDPR+ ++ +   + AG    +T++A D+G     + V++ V     P 
Sbjct: 1273 -ISGNEDEKFSIDPRTAMVSSKKMVTAGSYDILTIKAEDSGDPPLWSTVKLHVEWIRKPA 1331

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
            P+    +F Q  Y+ ++SE A++   V  + +S+
Sbjct: 1332 PSPVPLLFTQRYYNFSISETATVAQPVGVVAISQ 1365



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 12/165 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDN 78
            +++IA+   G        + + + D+NDNAP       +    +    +  + +++A+D 
Sbjct: 3099 YKLIAQATDGGGLFCRSDIFLKVLDVNDNAPLFSSTHYLASVYENASPKALLTRLQASDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGGK-- 134
            D G+N  + YS+    N G   F IDP +GV+  E +    + + Y + VQATD  G+  
Sbjct: 3159 DEGLNRTVLYSLVDSVN-GF--FSIDPVTGVVVLEKSLDRESRDSYRVRVQATDRAGQQG 3215

Query: 135  --SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              SSQ  + + V+   N  +PVFQ+  Y V V E  ++ + V  +
Sbjct: 3216 ALSSQVDLTILVL-DVNDNAPVFQRRDYAVTVPEDVAVGTEVVRV 3259



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 18/153 (11%)

Query: 37   VSLTVNLNDINDNAPR---LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V + V + D+NDN+P+   LP    +Q++A +    + ++ ATD D   N ++TY +   
Sbjct: 2054 VIVQVQVEDVNDNSPQFVNLPYYAVVQVEA-QPGSSVFRVSATDKDYSRNGQVTYGLKE- 2111

Query: 94   SNTGLHK-FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
                 H+ F++ P +G +         ++  +Y + + ATD G    SS+  + VSVV  
Sbjct: 2112 ----QHRNFQVHPVTGELTLKRAFEADLSNAEYKLILVATDGGFPPLSSEVELPVSVV-- 2165

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N   PVF +  Y V V E   ++++V  I  S
Sbjct: 2166 -NKAMPVFDKPFYGVTVKEDVDVSTSVLCINAS 2197



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            FRF+V A  ++    SV  V L V + D+NDN P       +   ++      ++V++ A
Sbjct: 2765 FRFKVAATTRRDLIESVSTVDLEVKILDVNDNKPLFETSTYVATVMEGMPVGTRVVQVRA 2824

Query: 76   TDNDLGVNAEITYSI-----YH-------------VSNTGLHKFRIDPRSGVIETTGKLI 117
             D D G N ++TYS+     Y+             VS T +  F ID ++G I T  ++ 
Sbjct: 2825 LDPDWGSNGQVTYSLGPLLTYNLDLTRDAGSFSGPVSTTSV--FAIDSKTGWITTVSQMD 2882

Query: 118  --AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              A   YS  V A+D       SS T+V ++ V   N   P+F++  Y   + E   +  
Sbjct: 2883 HEACSSYSFEVVASDLAELLPLSSTTVVTIT-VSDVNDNPPLFERELYRGAIKESDPLGE 2941

Query: 173  TVATITV--------SRLASGC 186
             VA +          +RL S C
Sbjct: 2942 VVAILKTKDRDGTDQNRLVSFC 2963



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 7/147 (4%)

Query: 39   LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +T+ L D+NDNAP     +   +  +     + + ++ A D D  VN  ITYSI      
Sbjct: 3328 VTIELMDVNDNAPAFSQDIYNLLVSEDASVGQTVTRVVAEDLDSQVNGRITYSILKGDRN 3387

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              + F IDP +G+++   KL      +YS++VQA D+G  +  + V +++ +   N   P
Sbjct: 3388 --NHFWIDPVAGLLKVNKKLDRELVSRYSLSVQAFDSGSPAMSSTVTINIDISDVNDNPP 3445

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF      V +    +  +T+  ++VS
Sbjct: 3446 VFNPPNSTVVIQLNQAAGTTLLQLSVS 3472



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 26/163 (15%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLG 81
            QVI R       S   S    L ++ +NAP                 +++++ ATD D G
Sbjct: 2467 QVIVRVLGANLYSPVFSQRFYLAEVQENAPE--------------GSKVIQVRATDEDSG 2512

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS----ITVQATDTGGKSSQ 137
            +  +ITYS   +++ G  +F ID   GVI T  KL     ++    +TV A D GG++S 
Sbjct: 2513 LYGQITYSF--INDLGKTQFTIDA-DGVISTVQKLDRENPFNRDMVLTVMALDGGGRASF 2569

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDV----NVSEGASINSTVAT 176
              V V V+   N  +P F+   Y +    NV++G+ +    AT
Sbjct: 2570 CTVRV-VLADENDNAPRFRAVEYRMSIKANVAKGSLVTQIQAT 2611



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 22/154 (14%)

Query: 38   SLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            ++ V + D NDN P           P   PI        + I+++ ATD D G +AEI Y
Sbjct: 3014 AVEVTVMDANDNRPICNQAVYSTSFPEDVPIN-------KGILRVGATDADSGSSAEIQY 3066

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            S++ +   G+  F +D  +G + T   +       Y +  QATD GG   ++ + + V+ 
Sbjct: 3067 SLFGI---GVEDFYMDANTGELRTAIVMDRELAPSYKLIAQATDGGGLFCRSDIFLKVL- 3122

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              N  +P+F    Y  +V E AS  + +  +  S
Sbjct: 3123 DVNDNAPLFSSTHYLASVYENASPKALLTRLQAS 3156



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 26/190 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR---------- 52
            V     LDR+       + +V    ++GT  S   +L++ L D+ND +P           
Sbjct: 863  VFVASQLDRETFPIFILKIEVRDMAERGTRRSSVTTLSIILEDVNDCSPAFIPTSYSARV 922

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            L  +PP  +        I  ++A D D+G   ++ YS+ +  N     F I P SGV+  
Sbjct: 923  LEDLPPGTV--------ITWVQAQDPDIGPGGQVRYSLINDFN---GTFEIGPISGVLRI 971

Query: 113  TGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEG 167
              +L   +Q  +++T+ A D G  S  SQT VE+ VV    N  +P F       +V E 
Sbjct: 972  RKELDFEKQQFFNLTLLAEDRGIPSLRSQTFVELEVVDVSENLYAPYFSDFAVRGSVKEN 1031

Query: 168  ASINSTVATI 177
            +   ++V T+
Sbjct: 1032 SRAGTSVLTV 1041



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 10/145 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNT 96
            + + D NDN P   + P   I   E      +++++ A+D D    A +++SIY  V   
Sbjct: 1424 IRIQDSNDNPPVFSL-PAYDISVSEDIPVDMELLRVRASDID--ERARLSFSIYGSVDPA 1480

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             +  FR++P +GV+ T  +L   A  Q+ +T+   D     ++ +  + V V   N   P
Sbjct: 1481 SMRLFRVNPGTGVVYTADRLDYEARTQHILTIMVKDQEFPFNRDLARILVAVEDSNDNIP 1540

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F    YD    E  S+ ++V  +T
Sbjct: 1541 YFTSTVYDATAYETFSVGTSVVQVT 1565



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 9/155 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V A ++     S  V + + + D+NDNAP    P+  P  ++       +++I+A 
Sbjct: 1090 YWLTVCAVDRGVPPLSASVEVFIQVEDVNDNAPLTSDPIYHPTIMENSPKDVSVIRIQAQ 1149

Query: 77   DNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            D DL  + + ++Y I   +    + F I+P++G+I TT + +  EQ   + + +   D  
Sbjct: 1150 DPDLTAIPSRLSYRI--TAGNPQNFFSINPKTGLITTTARKLDREQQAEHFLEITVIDGP 1207

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              + Q+ V V V V   N   P F + TY +++ E
Sbjct: 1208 VTTRQSTVWVIVHVQDENDNPPTFPEVTYRISLPE 1242



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)

Query: 39   LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V + D NDN P     +      +       +V++ A D D G+N ++TY+I    NT
Sbjct: 1528 ILVAVEDSNDNIPYFTSTVYDATAYETFSVGTSVVQVTALDKDNGLNGQLTYTI-EAGNT 1586

Query: 97   GLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS 152
            G   F ID  +G+I    +  L +   Y+++V+ TD+G     +   V +S++    ++ 
Sbjct: 1587 G-GVFGIDNTTGLIFIAKELDLTSLGFYTLSVRVTDSGFPPLMATASVRISLILSDFSK- 1644

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
            P F Q  Y   + E +   + V  ITVS L+    I +
Sbjct: 1645 PKFSQKEYQAEIMENSKTGTYV--ITVSALSRSAIIYD 1680



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 2/116 (1%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            +  ++A+D D+   + + YSI  +S      F ++P +GV+  + K   G + S  +  +
Sbjct: 2399 VTCVQASDADICDASRLRYSI--LSGNEKMTFMMEPDTGVLRLSNKRRQGMKLSYQLNVS 2456

Query: 130  DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + G  + T   +  V G N  SPVF Q  Y   V E A   S V  +  +   SG
Sbjct: 2457 VSDGVFTSTAQVIVRVLGANLYSPVFSQRFYLAEVQENAPEGSKVIQVRATDEDSG 2512



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
            ++ + A D+D G +  + YSI     +GL  F ID  +GVI T+G L     + Y +TV 
Sbjct: 1038 VLTVNAKDDDKGRDGVLKYSIQ--GGSGLGTFTIDEDTGVIYTSGILDCETKDSYWLTVC 1095

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G       VEV + V   N  +P+     Y   + E +  + +V  I
Sbjct: 1096 AVDRGVPPLSASVEVFIQVEDVNDNAPLTSDPIYHPTIMENSPKDVSVIRI 1146



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQ 127
           I ++ ATD D+G N E     Y+     +  F + P SGVI  TG  ++   +++ + VQ
Sbjct: 156 IGRVTATDADVGSNGE----FYYFFKNKIDLFAVHPTSGVITLTGRPRMDKQDRFELEVQ 211

Query: 128 ATDTGGK 134
             D G K
Sbjct: 212 VVDRGMK 218



 Score = 36.2 bits (82), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+  +GVI TT K +  EQ   Y + V+A    G  + T V + VV   N   PVFQQ
Sbjct: 1690 FFINHHTGVI-TTRKPLDFEQTTSYFLVVRALSMAGVEASTSVIIQVV-DVNDSPPVFQQ 1747

Query: 158  NTYDVNVSEGASINSTV 174
              Y   VSE A INS V
Sbjct: 1748 IRYVGVVSEAAPINSVV 1764



 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 7/156 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITY 88
            T A   V + + + D+NDN P         + +  +     ++++ A D D   NA ++Y
Sbjct: 2251 TGAKSEVDVDIVMLDVNDNPPLFQNTSYSAVLSENSMIGTPVLQVFAQDQDTEKNAVVSY 2310

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKS-SQTIVEVSV 144
             I          F ID  SG+I  T +L+  E   +++  V+ATD+G  + S  +     
Sbjct: 2311 QILSDIYNSTDYFSIDSNSGLI-YTARLLDYELIQRHNFIVRATDSGDPALSSDVTVSVT 2369

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V   N   P F Q  Y+  VSE A     V  +  S
Sbjct: 2370 VTDTNDNPPNFSQMLYEAFVSELAPKGHFVTCVQAS 2405


>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
          Length = 4766

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 15/192 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MI 56
            +V+ +++LDR+  +  + R Q   +  Q  A S  V+LT+ + D+NDNAP        + 
Sbjct: 3203 MVILEKSLDRESQDSYRLRVQATDQAGQRGALSSQVNLTILVLDVNDNAPVFQRRDYGVT 3262

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P  +  G    +++++ AT  D+G+NAEITY I   S   L KF ID + G I     L
Sbjct: 3263 VPEDVAVGT---EVLRVLATSVDIGLNAEITYRIR--SGNELGKFTIDTQLGAIFVADDL 3317

Query: 117  I--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 + Y +T++A D G    SS T+V + ++   N  +P F Q+ Y+V VSE AS+  
Sbjct: 3318 DFEVCKDYYLTLEAWDGGNPPLSSATVVTIELM-DVNDNAPTFSQDIYNVLVSEDASVGQ 3376

Query: 173  TVATITVSRLAS 184
             V  ++   L S
Sbjct: 3377 MVTRVSAEDLDS 3388



 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 12/154 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V++ D NDN P  P +   +I   E  R      + ++ A D DLG N  ITYSI 
Sbjct: 1232 VWVIVHVEDENDNPPTFPEVT-YRISLTERDRNKRGEPVYRVFAYDRDLGANGNITYSI- 1289

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV----VPG 147
             +   G  KF IDPR+ ++ +   + AG    +T++A D G     T V++ V     P 
Sbjct: 1290 -IEGNGDEKFIIDPRTAMVSSKKMVTAGSSDILTIKAEDGGDPPLWTTVKLHVEWIRKPV 1348

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
            P+    +F Q +Y+ +V E A++   V  + V++
Sbjct: 1349 PSPLPLLFTQRSYNFSVPETAAVAQPVGVVAVTQ 1382



 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            ++ + E LDR+          V+A +  G A+    S+ V L D NDNAPR   +   + 
Sbjct: 2554 VISTLEKLDRENALYKDMVLTVVALDGGGRASFC--SVRVILADENDNAPRFRAVEYRMS 2611

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKL-- 116
            I+A  A+  +V +I+A+D D G N  ITYS+Y  +   L     ++P SG + T   +  
Sbjct: 2612 IKANVAKGSLVTQIQASDPDAGSNGRITYSLYSEARLSLVDVLEVEPDSGWMMTKSNVDH 2671

Query: 117  IAGEQYSITVQATDTGGKSSQTIVE--VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            + G   S  V+ATD G  +  ++V   + VVP P+   P F Q  Y   + E  ++ + +
Sbjct: 2672 LQGTVLSFFVKATDCGSPAKHSLVSAFIHVVP-PDAFVPSFSQPQYSFTIPEDTAVGTAL 2730

Query: 175  ATI 177
             ++
Sbjct: 2731 GSV 2733



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 16/152 (10%)

Query: 37   VSLTVNLNDINDNAPR---LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V++ V + D+NDNAP    LP    +Q+ A E    I K+ A D D GVN E++YS+   
Sbjct: 2071 VTVQVQVEDVNDNAPEFVNLPYYAAVQVDA-EPESAIFKVSAVDRDAGVNGEVSYSLKQQ 2129

Query: 94   SNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK--SSQTIVEVSVVPGP 148
                   F+++P +G +         ++  +Y + + ATD G    S +  + V+VV   
Sbjct: 2130 H----RNFQVNPVTGELTLKKAFEADLSNAEYKLVLVATDGGFPPLSREVELPVTVV--- 2182

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   PVF +  Y V V E   ++++V  I  S
Sbjct: 2183 NKAMPVFDKPFYGVTVREDVVVSTSVLGINAS 2214



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 12/173 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
            +++IA+   G        +++ + D+NDNAP    P       +    +  + +++A+D 
Sbjct: 3116 YKLIAQATDGGGLFCRCDISLKVLDVNDNAPAFSSPHYLASVYENAAPKALLTRLQASDP 3175

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGK-- 134
            D G+N  + Y++    +     F IDP SG  ++E +    + + Y + VQATD  G+  
Sbjct: 3176 DEGINRTLVYTLVDSVD---EFFSIDPVSGMVILEKSLDRESQDSYRLRVQATDQAGQRG 3232

Query: 135  --SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              SSQ  + + V+   N  +PVFQ+  Y V V E  ++ + V  +  + +  G
Sbjct: 3233 ALSSQVNLTILVL-DVNDNAPVFQRRDYGVTVPEDVAVGTEVLRVLATSVDIG 3284



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 25/183 (13%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            FRF+V A  ++    +V  V L V + D+NDN P       +   ++      ++V++ A
Sbjct: 2782 FRFKVAATTRRDLIEAVTTVDLEVKILDVNDNKPMFETNTYVSTVMEGMPVGTRVVQVRA 2841

Query: 76   TDNDLGVNAEITYSI--YHVSNTGLHK--------------FRIDPRSGVIETTGKLIAG 119
             D D G N ++TYS+      N  L K              F ID ++G I T  ++   
Sbjct: 2842 LDPDWGSNGQVTYSLGPLLTYNLDLTKSAPSSNGPITTSSVFAIDSKTGWITTVSQMDHE 2901

Query: 120  E--QYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E   YS  V A+D G     SS T V ++ V   N   P F++  Y   V E  S+   V
Sbjct: 2902 ECSSYSFEVVASDLGEVRSLSSTTAVTIA-VSDVNDNPPRFERELYRGAVKESDSLGEVV 2960

Query: 175  ATI 177
            A +
Sbjct: 2961 AVL 2963



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 9/155 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V A ++  T     V + + + D+NDNAP    P+  P+ ++       +++I+A 
Sbjct: 1107 YWLTVYATDRGVTPLFASVEVFIQVEDVNDNAPLTSDPIYHPVVMENSPKDVSVIRIQAQ 1166

Query: 77   DNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            D DL    + ++Y I   +    + F I+PR+G+I TT + +  EQ   + + V   D  
Sbjct: 1167 DPDLTSTPSRLSYRI--TAGNPQNFFSINPRTGLITTTTRKLDREQQAEHFLEVTVIDGP 1224

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              + Q+ V V V V   N   P F + TY ++++E
Sbjct: 1225 VTTRQSTVWVIVHVEDENDNPPTFPEVTYRISLTE 1259



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT 96
            +T+ L D+NDNAP     I  + +    +  Q+V ++ A D D  VN  ITYSI      
Sbjct: 3345 VTIELMDVNDNAPTFSQDIYNVLVSEDASVGQMVTRVSAEDLDSQVNGRITYSILKGDRN 3404

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV 144
              + F IDP +G+++   +L      +YS++VQA D+G  +  + V +++
Sbjct: 3405 --NHFWIDPVTGILKVNKRLDRELVSRYSLSVQAFDSGSPAMSSTVTLNI 3452



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 39   LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V + D NDN P     +      ++  +   ++++ A D D G+N ++TY+I    NT
Sbjct: 1545 ILVAVEDSNDNIPYFTSTVYDATAYESSPSGTSVLQVTALDKDNGINGQLTYTI-EAGNT 1603

Query: 97   GLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G   F ID  +G+I       L +   Y++TV+ TD+G           + +   +  SP
Sbjct: 1604 G-GVFGIDAATGLIFIARALDLTSVGFYTLTVRVTDSGFPPLMATASARISLMLSDYSSP 1662

Query: 154  VFQQNTYDVNVSEGASINSTVATIT-VSRLA 183
             F Q  Y   + E  ++ + VAT+T +SR A
Sbjct: 1663 KFSQKEYQAEIMENGTVGTHVATVTALSRSA 1693



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++++ ATD D G+  +ITYS   +++ G  KF +D   GVI T  KL       +   +
Sbjct: 2517 KVIQVRATDEDSGLFGQITYSF--INDLGKTKFAVDA-DGVISTLEKLDRENALYKDMVL 2573

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            TV A D GG++S   V V ++   N  +P F+   Y +++    +  S V  I  S
Sbjct: 2574 TVVALDGGGRASFCSVRV-ILADENDNAPRFRAVEYRMSIKANVAKGSLVTQIQAS 2628



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 22/151 (14%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN+P           P   PI        + I+ + ATD D G +AEI YS++
Sbjct: 3034 VTIMDANDNSPICNQAVYSASFPEDMPIN-------KGILTVAATDADSGSSAEIQYSLF 3086

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
             +   G+  F +D  +G + +   +       Y +  QATD GG   +  + + V+   N
Sbjct: 3087 GI---GVEDFYMDANTGELRSATVMDRETTPSYKLIAQATDGGGLFCRCDISLKVL-DVN 3142

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +P F    Y  +V E A+  + +  +  S
Sbjct: 3143 DNAPAFSSPHYLASVYENAAPKALLTRLQAS 3173



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 25/151 (16%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
            V    +LDR+       + +V  + ++GT  S   +L++ ++D+ND AP         R+
Sbjct: 880  VFVASHLDRETTPMFTLKIEVRDKAERGTRRSSVTTLSIIIDDVNDCAPAFIPNSYGARV 939

Query: 54   PM-IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            P  +PP  +        I  ++A D D+G + ++ Y++ +  N+    F ID  SGV+  
Sbjct: 940  PEDLPPGAV--------ITWVQAQDPDIGPSGQVRYALMNDFNS---TFEIDAVSGVLRL 988

Query: 113  TGKLIAGEQ--YSITVQATDTGGKS--SQTI 139
              +L   +Q  +++TV A D G  S  SQT 
Sbjct: 989  RKELDFEKQQFFNLTVIAEDRGVPSFISQTF 1019



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 10/145 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNT 96
            + + D NDN P     P   +   E      ++ ++ A+D  L   A ++YSIY  V   
Sbjct: 1441 IRVQDSNDNPPVFSQ-PAYDVSVSEDVPVDVELARVRASD--LDERARLSYSIYGSVDPA 1497

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             +  FR++P +G++ TT +L   A  Q+ +T+   D     ++ +  + V V   N   P
Sbjct: 1498 SMRLFRVNPGTGIVYTTDRLDYEARTQHILTIMVKDQEFPFNRDLARILVAVEDSNDNIP 1557

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F    YD    E +   ++V  +T
Sbjct: 1558 YFTSTVYDATAYESSPSGTSVLQVT 1582



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 2/116 (1%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            +  ++A+D D+     + YSI  VS      F ++P +GV+  + K   G + S  +  +
Sbjct: 2416 VTCVQASDADICDAQRLRYSI--VSGNERMTFLMEPHTGVLRLSNKRRQGMKLSYQLNVS 2473

Query: 130  DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + G  + T   V  V G N  SPVF Q  Y   V E A   S V  +  +   SG
Sbjct: 2474 VSDGVFTNTAQVVIRVLGANLYSPVFSQRFYLAEVQENAPPGSKVIQVRATDEDSG 2529



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 8/173 (4%)

Query: 19   FRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIEAT 76
            + F+V+A +  +  + S   ++T+ ++D+NDN PR    +    ++  ++  ++V +  T
Sbjct: 2906 YSFEVVASDLGEVRSLSSTTAVTIAVSDVNDNPPRFERELYRGAVKESDSLGEVVAVLKT 2965

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQ--YSITVQATDTG 132
             +  G +     S Y         F + P  G   +  +G L   +Q  Y + + A+D G
Sbjct: 2966 RDRDGTDQNRLVSFYISGGNPRGVFGLAPVQGEWKVYVSGLLDREQQDWYLLNITASD-G 3024

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               + T+VEV+++   N  SP+  Q  Y  +  E   IN  + T+  +   SG
Sbjct: 3025 LYVAHTVVEVTIMDA-NDNSPICNQAVYSASFPEDMPINKGILTVAATDADSG 3076



 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D+D G +  + YSI      GL  F ID  +GVI T G L   + + Y +TV 
Sbjct: 1055 VLTVSAKDDDKGRDGALRYSIK--GGNGLGTFTIDEDTGVIYTAGILDCESKDAYWLTVY 1112

Query: 128  ATDTG 132
            ATD G
Sbjct: 1113 ATDRG 1117



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQAT 129
           ++ ATD D+G N E     Y+     ++ F + P SGVI  TG  ++   +++ + VQ  
Sbjct: 178 RVTATDADMGSNGEF----YYFFKNRVNLFAVHPTSGVITLTGRPRMDKQDRFELEVQVV 233

Query: 130 DTGGK 134
           D G K
Sbjct: 234 DRGMK 238


>gi|328721195|ref|XP_001944272.2| PREDICTED: cadherin-related tumor suppressor-like [Acyrthosiphon
            pisum]
          Length = 5057

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 7/146 (4%)

Query: 45   DINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D NDNAP     +  + +    +R  +I  I A D D GVN  +TYS+  +S+     F 
Sbjct: 1823 DTNDNAPSFAKSVYSLDVSESRSRGTKIGDITAVDEDEGVNGVVTYSV--ISDWANDVFN 1880

Query: 103  IDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
            IDP +G    TGKL   E   Y +TVQA D G     + V V + V   N  +PVF+ N+
Sbjct: 1881 IDPHTGAFSLTGKLDHEEVQHYIMTVQAQDAGKPMLSSTVTVYINVIDENDNAPVFETNS 1940

Query: 160  YDVNVSEGASINSTVATITVSRLASG 185
            Y+V+V E A++N+ VAT+  +   SG
Sbjct: 1941 YNVDVYENATVNTIVATVMATDRDSG 1966



 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 10/175 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIE 74
            ++   V+A +      S    + +N+ D N+NAP+        PI I   E    ++ + 
Sbjct: 2956 EYTLTVLATDNGKPPLSSECFIIINVIDSNNNAPQFEKKKYFSPIPINL-EVWSPLITVV 3014

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDT 131
            ATD+D GVNAEI Y +Y  + T L   ++D  SG++    KLI     + Y + ++ATD 
Sbjct: 3015 ATDHDSGVNAEIEYFVYGGNATDL--VQVDRFSGLVSLKKKLIDTDLSKNYDLVIRATDH 3072

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G    Q I +V+  +   N  +P F   +Y V V E   I STV T+  +    G
Sbjct: 3073 GVPPKQDITDVTFTITSENNFNPEFSSLSYQVFVPENEPIGSTVLTVKATDQDEG 3127



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 25/198 (12%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------- 51
           Y+V     LDR+  N  K+   V+A +K   A +    L + +NDIND+ P         
Sbjct: 414 YIVRVHGILDREQIN--KYNLTVLASDKGTPARTTMAYLLIYVNDINDHEPVFEKSEYSS 471

Query: 52  RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            L  + P+          +  I ATD D G+NA+I YSI  VS      F IDP +G++ 
Sbjct: 472 TLSELSPVGTY-------VASITATDEDTGINAQIFYSI--VSGNAFGWFDIDPDTGLVT 522

Query: 112 TTGKLIAGEQY---SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
             G+L   EQ     I + A D G        ++ V V   N   P F Q    V + E 
Sbjct: 523 LKGRL-DREQMGAAEIKISARDGGPNPKWAYTQLKVIVLDENDERPEFTQELIVVKMLEN 581

Query: 168 ASINSTVATITVSRLASG 185
              N+ VA +T S    G
Sbjct: 582 VPENTLVAMLTASDHDQG 599



 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 15/185 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPI-----QI 61
            NLDR+      +   V+A++   T     V+ LTV   D+NDN P       I     + 
Sbjct: 2423 NLDREENE--VYYLTVVAQDSSLTEPKASVANLTVFAKDVNDNYPIFSTSQSIIYVSDKT 2480

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            Q+G+    I  + A D D G N +I   +YH+ +  +  F ID  +GVIE+  KL    +
Sbjct: 2481 QSGQF---IFGVTAIDLDSGDNGKI---VYHLISGDIDMFHIDENTGVIESIQKLNKQME 2534

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ-NTYDVNVSEGASINSTVATITVS 180
            Y I ++A+D G        +++V+  P+   PV +   T  +++ E +S  S V+ I  +
Sbjct: 2535 YKIKIEASDKGQIPKNAEFDLTVILWPDRDFPVVRHVGTKQLSIVENSSPGSGVSRILAT 2594

Query: 181  RLASG 185
               SG
Sbjct: 2595 TPKSG 2599



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 86/187 (45%), Gaps = 17/187 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            ++  K  LDR+  +   +   V+ R+    A S  V   V++ D NDN P    +     
Sbjct: 1041 MLYIKHRLDRESRD--YYALSVVVRDAGTPARSSSVVAIVHVTDENDNKPEFANVTFDFH 1098

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-----G 114
            I   E     V K+ A+D D G NAE+TYS+ +        F IDP++G I T       
Sbjct: 1099 INENEPAGTFVGKLSASDRDTGRNAELTYSLINCKT----DFWIDPKNGFIRTQREFDRE 1154

Query: 115  KLI-AGEQYSITVQAT--DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
            +LI A  Q  I+++AT  D G        +V+V V   N   P F +  Y V VSEG+ +
Sbjct: 1155 QLIRATGQNVISLEATVSDNGKHPLYDKTKVNVYVNDVNDNRPRFFRQPYRVQVSEGSPV 1214

Query: 171  NSTVATI 177
             + V  +
Sbjct: 1215 GTHVLRV 1221



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 15/191 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            +++ K  +D +     +++  + A +         V LTVN+ D+NDN P     P   +
Sbjct: 2627 VIIGKNGIDHE--KSSQYKIWIEASDSDEPKLRSAVLLTVNVTDVNDNPPVFEY-PFYTV 2683

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
               E       ++ + A D D G N+ ITY +    N G+  F ID  SG I T  KL  
Sbjct: 2684 SVQEETFPPTSVITVVAIDKDTGKNSIITYRLVDDMN-GI--FSIDDVSGEIVTNTKLDR 2740

Query: 118  -AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               + Y++TV+A D G    +   ++ ++V+   N   P F +  + VNV+E   + S V
Sbjct: 2741 ETDDHYTLTVEAVDQGYPPLTGSAMIHITVL-DINDNPPRFTR-LFSVNVTENTEVGSFV 2798

Query: 175  ATITVSRLASG 185
              IT S L  G
Sbjct: 2799 IGITSSDLDIG 2809



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            +V+   LDR+  +      + + +       S  + +TV   DINDN PR   +  + + 
Sbjct: 2732 IVTNTKLDRETDDHYTLTVEAVDQGYPPLTGSAMIHITVL--DINDNPPRFTRLFSVNVT 2789

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AG 119
            +  E    ++ I ++D D+GVNA+ TY      N G + F+ID  +G +     +     
Sbjct: 2790 ENTEVGSFVIGITSSDLDIGVNAKATYRF--TENPG-NMFKIDSDTGKVYIASAIDREVQ 2846

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++Y + V A D G   ++T + ++ +   N  +P F+++ Y  N  E   I +TV  +
Sbjct: 2847 DEYLLNVVAAD-GSWQAETPLTIT-IQDVNDNAPEFEKSNYKFNFPETQKIGATVGRV 2902



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 13/131 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQAGE- 65
            LDR+      +  +V A +  GT   +  S TV +   D NDN P+    PP+ +   E 
Sbjct: 1261 LDRE--TRASYMLRVTAHD-NGTTVQLNASATVTVEVLDDNDNPPKFES-PPLGVSIYEN 1316

Query: 66   --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--Q 121
                 ++V+  ATD DLGVN+E+ YSI  VS      F ID  +GV+    +L   +   
Sbjct: 1317 ATVNTELVRFRATDPDLGVNSEVRYSI--VSGNRRDTFHIDIVTGVLYLHKRLDYEDISA 1374

Query: 122  YSITVQATDTG 132
            Y + + A D G
Sbjct: 1375 YVLNISAYDNG 1385



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 25/190 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            ++ + + +DR+  +    R    A  K GT       + V + D+NDN P    +I  + 
Sbjct: 836  VLTTWKKIDRENQSFYSIRIGARAGLKFGTTL-----VNVTILDVNDNEPTFVTVIDEVD 890

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI-------ET 112
            +    A  +++    A D D+G+N  +TY +    ++    FRI   SG++         
Sbjct: 891  LYENTAVGQELCVARAKDKDVGLNGRVTYRLVSKPDS---LFRITESSGIVYLHKPVYTA 947

Query: 113  TGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             G ++A E     + ATD+G    S++ +V +  +   N  +PVF Q +Y+ ++SE  ++
Sbjct: 948  PGTVLAAE-----IMATDSGNPPLSAKHVV-LFTIQDVNDHTPVFDQTSYESSLSEATAV 1001

Query: 171  NSTVATITVS 180
            NS    +T +
Sbjct: 1002 NSRFFGLTAT 1011



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 6/172 (3%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            +++  VIA +          +L++ L DINDN P     +     ++       + ++ A
Sbjct: 3165 EYKLNVIAMDTGFEPKKSKATLSIMLTDINDNPPTFNQTLFNVFILENSPVGTFVTQMVA 3224

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
             D D   NA I YSI     TG H F  +  SG I +       ++  YS+ + A +   
Sbjct: 3225 KDLDSPKNAIINYSI--TGGTGEHLFYFNSTSGAIFSKQVFDYEKEKSYSLEILAINPNS 3282

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S +   +  + G N   P F Q+ +  +V E A I   V  +  + L +G
Sbjct: 3283 TLSGSTKVIVHIDGVNEYYPTFSQSVFYYDVPESAEIGVNVGAVKATDLDAG 3334



 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 28/181 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           ++ +E+L  D       R+ +I    Q T    P+ + + + D+NDNAP  P  P I + 
Sbjct: 81  ILDRESLSND-------RYDLIVLSSQPT---YPIEVRILVADVNDNAPEFPE-PVISVS 129

Query: 63  AGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--------VIE 111
             E+     +++   ATD D G N  ++     V+    +KFR+D  S          ++
Sbjct: 130 FPESAAPDNKVLLDTATDKDAGANG-VSSDYQIVAGNVDNKFRLDVTSNPGGDLTYLYLQ 188

Query: 112 TTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           TTGKL    +A  Q +I+V+      +     V V+++   N   P+F    Y   ++E 
Sbjct: 189 TTGKLDRETVAFYQLNISVRDGGVPTRYGFQTVNVTIL-DVNDNPPIFAHTDYSAWLNES 247

Query: 168 A 168
           A
Sbjct: 248 A 248



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 15/150 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + +K  LDR+     +++ +V+A+++     S   ++ +++ D+NDN    P+  P Q  
Sbjct: 629 LTAKTQLDRE--KVLEYKIKVLAKDQGSPPKSSTATVILDVLDVNDND---PVFYPQQYV 683

Query: 63  AGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGK 115
           A           I+ + A D D G NA + Y +    ++GL  F ID R G I  +++G 
Sbjct: 684 AFVGDNHPTGTNILTVSAYDVDEGENAVVEYRLASSGDSGL--FYIDARDGSIYLKSSGD 741

Query: 116 LIAGEQYSITVQATDTGGKSSQTIVEVSVV 145
           L     Y + V A D  G+ +     V ++
Sbjct: 742 LTKS-IYRLNVTAVDRDGRRAAEDASVEII 770



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 9/119 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++ ++ATD D G N  + YS  ++S     KF+++  +G I T  +++  E   +Y + V
Sbjct: 3116 VLTVKATDQDEGPNGLVRYSFENLS----EKFKLNSDTGAI-TIAQILDFERIREYKLNV 3170

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             A DTG +  ++   +S+ +   N   P F Q  ++V + E + + + V  +    L S
Sbjct: 3171 IAMDTGFEPKKSKATLSIMLTDINDNPPTFNQTLFNVFILENSPVGTFVTQMVAKDLDS 3229



 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+      ++ ++ A+++   + +  + LTVN+ D NDN+   P+  P Q  +     
Sbjct: 2106 LDRE--TKSSYKLEIGAKDRGDPSLNSIMKLTVNILDENDNS---PIFDPRQYTSSVPEN 2160

Query: 69   -----QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
                  +V++ ATD D+G NA I Y+I +  +  L  F I   +G+I    K +  E   
Sbjct: 2161 VTIGYTVVQLFATDKDVGPNAGIRYTITN-GDENL-DFSIADDTGLIR-VAKYLNYERKS 2217

Query: 121  QYSITVQATD-----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +Y +T++A D         +S  +  +  V   N   PVF  + Y ++V E
Sbjct: 2218 RYVLTIKAEDGPVGIDNRVNSDEVTVIITVLDINDNYPVFPDSPYTIHVLE 2268



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD+D+G+NA+I YS+         KF++D  +G++ T   L   E   Y +TV 
Sbjct: 2381 VTQLTATDSDIGLNAKIKYSLL---GNKQDKFQMDEDTGILRTLSNLDREENEVYYLTVV 2437

Query: 128  ATDTG-GKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A D+   +   ++  ++V     N   P+F  +   + VS+       +  +T   L SG
Sbjct: 2438 AQDSSLTEPKASVANLTVFAKDVNDNYPIFSTSQSIIYVSDKTQSGQFIFGVTAIDLDSG 2497



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 69   QIVKIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSIT 125
            +I+ + A D D    N + +YSI + + T L  FR+DP++G IET G         Y I 
Sbjct: 3428 KILTVHAVDKDAWPQNNQFSYSILY-NMTKL--FRVDPQNGTIETVGHFDRETINYYEII 3484

Query: 126  VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A DTG   ++    V+V ++   N   P+   +     VSE   IN+++  +T +
Sbjct: 3485 VGAVDTGSPPQTGSATVKV-MITDVNDNGPLLAPDNSVGYVSENEPINTSIMVLTAT 3540



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 8/148 (5%)

Query: 43   LNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            + D+ND+ P            +A     +   + ATD D G NA ++Y+I      G   
Sbjct: 976  IQDVNDHTPVFDQTSYESSLSEATAVNSRFFGLTATDGDYGSNARLSYAIEEGDVEG--N 1033

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQ 157
            F I P  G++    +L   + + Y+++V   D G  + S ++V +  V   N   P F  
Sbjct: 1034 FGIFP-DGMLYIKHRLDRESRDYYALSVVVRDAGTPARSSSVVAIVHVTDENDNKPEFAN 1092

Query: 158  NTYDVNVSEGASINSTVATITVSRLASG 185
             T+D +++E     + V  ++ S   +G
Sbjct: 1093 VTFDFHINENEPAGTFVGKLSASDRDTG 1120



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            T  S   ++T+ ++D NDNAP    +    I+A  A   I+   A D D   N  +TY +
Sbjct: 1498 TRLSAEKTVTIIVDDENDNAPVFVSVDTGLIRAKHAGALIMHALARDMDTSTNGLVTYEM 1557

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQ 137
                +     F I   SG I    +L   E+ Y +TV+ATD   +S +
Sbjct: 1558 VGGDS---ELFSIHRTSGAISLRRELTRPERSYKLTVRATDEAVQSER 1602



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 24/130 (18%)

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG---------------K 115
           +++ ATD DLG N  I   +Y++  T  ++FR+D  +G I TT                +
Sbjct: 255 LQVTATDADLGENGRI---VYYLPETSDNRFRVDSETGAIYTTEVPNCPQQNCPHTQQPR 311

Query: 116 LIAGEQYSITVQATDTGG--KSSQTIVEVSVVPG----PNTRSPVFQQNTYDVNVSEGAS 169
               +    TV A D G   +  +  V +S++      P  R   F  N     V E A 
Sbjct: 312 ASCPKSCVFTVHARDHGSPRQDGRAYVTISLIDANDHDPAIRFRYFPSNAAYATVDENAI 371

Query: 170 INSTVATITV 179
             S VA ++V
Sbjct: 372 NGSVVAAVSV 381



 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           LV  K  LDR+    G    ++ AR+           L V + D ND  P     +I   
Sbjct: 520 LVTLKGRLDRE--QMGAAEIKISARDGGPNPKWAYTQLKVIVLDENDERPEFTQELIVVK 577

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIA 118
            ++       +  + A+D+D G N  ++YS++  V       F +D  +G +    +L  
Sbjct: 578 MLENVPENTLVAMLTASDHDQGTNGSVSYSLHPEVQYKYKGAFALDSLTGQLTAKTQLDR 637

Query: 119 GE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +Y I V A D G   KSS   V + V+   N   PVF    Y   V +     + +
Sbjct: 638 EKVLEYKIKVLAKDQGSPPKSSTATVILDVL-DVNDNDPVFYPQQYVAFVGDNHPTGTNI 696

Query: 175 ATITVSRLASG 185
            T++   +  G
Sbjct: 697 LTVSAYDVDEG 707


>gi|443705216|gb|ELU01871.1| hypothetical protein CAPTEDRAFT_220753 [Capitella teleta]
          Length = 9334

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 81/165 (49%), Gaps = 8/165 (4%)

Query: 21  FQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDN 78
           F+VI  EK      S  V +TVN+ D NDN+P+       + I  G  RR + K+EA D 
Sbjct: 476 FRVIVTEKDVPNPKSTSVDVTVNVLDRNDNSPQFVAKEYSVTIPEGNGRRTVTKVEAIDV 535

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQT 138
           D G   E+TY+I  VSN G  KF +DP +G +  T  +  GE Y IT++A D    S  +
Sbjct: 536 DSGFYGEVTYTISSVSNGGRQKFDVDPTTGQLYVTSLVDRGENYVITIEAKDNPSTSDGS 595

Query: 139 IVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               SV      V   N  +P      Y V VSEG  + S + T+
Sbjct: 596 SSLSSVAIVNVDVELANNLAPSIPSAQYSVIVSEGVVVGSKIFTV 640



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 25/166 (15%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------IE 74
           F  ++RE   T      +L+V + D+NDN+P       I  Q   + R+ +K      + 
Sbjct: 693 FDPVSRETATT------TLSVTVTDVNDNSPVF-----ISTQREFSVRENLKNEFVGDVR 741

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTG 132
           A D D G NA ITYS+   +  G   F ID  +G I T   L   + ++  + V A+D G
Sbjct: 742 AIDLDEGDNAVITYSV--PAENGF--FSIDANNGQIRTIRPLDYEQSHAHYLLVTASDRG 797

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             S Q++V +++ V       PVF    YD +V E   I   VAT+
Sbjct: 798 VSSRQSVVNITILVEDQEDMVPVFINKRYDASVPEN-EIGFKVATV 842



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPI 59
            V ++  LD +  N  ++   V  RE          ++ V + D ND  P   R       
Sbjct: 874  VTTRSGLDYERQN--QYELLVSTREVSKNDPQYTATVMVQVLDRNDYTPEFDRNTYDADD 931

Query: 60   QIQAGEARRQIVKIEATDND-LGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI 117
             I+      +++++ A DND  G+N +I Y+I  V   G +  F + P +G++     L 
Sbjct: 932  LIENATPGTEVIQVVANDNDPEGINKQIRYTIESVRPAGGNDLFYVWPETGIVTVRRDLA 991

Query: 118  A----GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +      +YS+TV+A D G  S  +  +V +    N  +P F   +YDV +     +N  
Sbjct: 992  SVSDLESRYSVTVKAEDLGTPSLSSTTDVLINIVKNLEAPEFNPASYDVTIDFTKPVNEE 1051

Query: 174  VATI 177
            V  +
Sbjct: 1052 VEIV 1055



 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 12/140 (8%)

Query: 47   NDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGV-NAEITYSIYHVSNTGLHKFRI 103
            N N PR       Q  ++  E  R +++I ATD+D    + ++ Y + +        F I
Sbjct: 2391 NQNDPRFESTSYEQTILETFEIARSVIQIRATDSDEKEPHNQVEYLLTN------EYFTI 2444

Query: 104  DPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQT-IVEVSVVPGPNTRSPVFQQNTY 160
            D  SGVI     L+    ++Y + V A D G  S  T    VS+V   N  +P+     Y
Sbjct: 2445 DSTSGVISLKRSLLGDSRDEYRLDVYAKDKGVPSRVTGPNSVSIVVIRNRFTPIITNEPY 2504

Query: 161  DVNVSEGASINSTVATITVS 180
            +V++S+ A I   VATI  S
Sbjct: 2505 EVSLSQSADIGKEVATIAAS 2524



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 73   IEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + ATD D   + + ITYSI       L+ F+I   SG I  +  L   E   Y I V+AT
Sbjct: 1055 VRATDADSNSIFSSITYSI-QGDGKALNYFKIGSESGRITISRTLREDEDLIYPIRVRAT 1113

Query: 130  DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D GG+ +   V V+V    N   PVF Q  Y  ++ +   ++S   T++ +
Sbjct: 1114 DGGGRYTDVAVYVNV--RRNLNPPVFPQEQYQASIQDNEPLDSGFITVSAT 1162



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 70   IVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            I+ +EA D D+ G N+++TY I    +T    F I P +G I     LI  A + + I V
Sbjct: 8194 ILTVEAMDADVAGPNSKVTYKITG-DDTARQFFTITPSTGSIALNQSLIGVATKLFMIQV 8252

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            QA+D G       V V+V    +   P F +  YD  + +   + S +  +  S
Sbjct: 8253 QASDQGIPPRTADVTVTVTISQDENIPTFTETEYDTEIVQETPVGSRIIAVEAS 8306



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 7/168 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
            +   + A + +G  A+  V+L ++  D       +P  P    +    +  +  + A D 
Sbjct: 6487 YSLTIQASDGRGRTANAVVTLDIDREDEPPFFEGVPYRPGKTSENARPKSGVYTVRAVDP 6546

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGK 134
            DL    ++T+ +  +     + F I+ +SG+I T G L    +    Y++ V   D+   
Sbjct: 6547 DLM--GDLTFEMVGIFPAEQY-FYIESKSGIIRTYGNLKKDPLQLLSYTLRVVVYDSASP 6603

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            S Q + E++     N   PVF    Y+  +S+G  +  ++  ++ S L
Sbjct: 6604 SKQAVTELTFPIRRNEFGPVFSATLYNKEISDGFPLGVSILQLSASDL 6651



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 62   QAGEARRQIVKIEATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
            Q+ +  +++  I A+DND      +I+YSI    +     FRID  SG I   G L +  
Sbjct: 2510 QSADIGKEVATIAASDNDERDPFNKISYSIIG-DDLAPSLFRIDQTSGRITVNGNLESDG 2568

Query: 120  -EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             + YSI V+ +D G   ++  TIV V +    N  +P F   +Y +   E  ++ S VAT
Sbjct: 2569 TQTYSIRVRVSDGGTPPRTDSTIVRVDM--SRNLNAPTFIPVSYSMRTLETLALGSVVAT 2626

Query: 177  IT 178
            ++
Sbjct: 2627 VS 2628



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-EQYSITVQATDT 131
            ++ T  DL    EI YSI   S+ G   F ++ ++G++     L      YS+T+QA+D 
Sbjct: 6437 LQVTAQDLDSTDEIEYSIISASDNGADFFLLEAKTGIVRLRKPLDGTFSSYSLTIQASDG 6496

Query: 132  GGKSSQTIVEVSV 144
             G+++  +V + +
Sbjct: 6497 RGRTANAVVTLDI 6509



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 99   HKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            H FRIDP SG +     L    +   +Y + V+A D+G   ++    V +    N   P 
Sbjct: 7184 HFFRIDPSSGEVFVNQDLSTDTLKLTEYMLQVEAFDSGYPENRATAFVKITVNRNANVPR 7243

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F+Q+TY   +SE   + + V T+
Sbjct: 7244 FEQSTYQKTLSEDFPLVTEVITV 7266



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQA 128
            I+ I+A D DL    ++ Y++     +  + FR+D    V ++++ +     QY++ VQ 
Sbjct: 6750 IIHIDANDPDL--KGDLVYAVVGDLASPSY-FRVDENGDVFVKSSLREDIASQYTLRVQV 6806

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             D+        V V +    N   P+F ++ YD  V E   I   +AT++ S L
Sbjct: 6807 YDSANPIQTKTVRVVITVRRNVNGPIFGESNYDAKVVENFPIGQIIATVSASDL 6860



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)

Query: 70   IVKIEATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG----EQYSI 124
            I  I A D D  G N+ +TY +    N G+  F+ID  SG I     L+A     E+Y +
Sbjct: 1373 ISSISANDRDGEGPNSLVTYYLTG-DNLGISYFQIDENSGSISVRKSLLADQFGTEEYRL 1431

Query: 125  TVQATDTGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            T  A D G     +I   + ++V+   N  +P F  + Y   +S+ A +   V T+
Sbjct: 1432 TAVARDQGKPQKSSINATININVIRDLN--APKFDGSDYTFVISQDAGVRDRVGTL 1485



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 12/160 (7%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDL-GV 82
            +K G  ASV + +     + N N PR     P  +   E    R ++  +   D D  G 
Sbjct: 3776 KKYGNEASVRIDV-----ERNRNTPRFEGTLPYAVTVDENLSVRSEVFTVLTRDGDQEGP 3830

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIV 140
             + + Y +    ++G   F ID  SG I     L     E + + V+  D+G        
Sbjct: 3831 FSRLYYDLIG-DDSGPTYFAIDAESGEITVARSLGETDAEDFILRVRVRDSGTPFLYNTT 3889

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V++    N ++P F Q+ Y VN+ E   I ++VA ++ +
Sbjct: 3890 TVAIKVNRNFQNPQFAQSRYTVNIVENWVIGTSVAQVSAT 3929



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 34/177 (19%)

Query: 8   NLDRDPPNPGKF------RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++DRD  +  +F      RF ++   +   +  +   + V + D+NDNAP+   I P ++
Sbjct: 98  SIDRDGASAAEFDDMEEIRFTLVCDPRSQASVRISYYVRVEILDVNDNAPQFQGI-PYEV 156

Query: 62  QAGEAR-------RQIVKIEATDNDLGVNAEITYSIYHVSNT---GLHKFRIDPR--SGV 109
              E         RQI    ATD D G N++I + I     +   G+  F I PR   G+
Sbjct: 157 LISELTPVGTTIFRQIT---ATDLDAGSNSQIDFDIVAGDGSIYDGVRHFHI-PRQDEGL 212

Query: 110 IETTG-----KLIAGEQYSI-TVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQ 156
           +          L  G  Y I  + ATD       K+S T + V+V  G + + P F+
Sbjct: 213 VVIANALDFESLAEGRNYYILNISATDNSNFDPRKTSYTTLRVTVSDG-DDQGPAFE 268



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 11/123 (8%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGL--HKFRIDPRSGVIETTGKLI--AGEQYSI 124
            +I+ +EA+D D  V        Y +   G+    F I+  +G+I     L    G QY I
Sbjct: 8299 RIIAVEASDKDCPVK-------YDMVGDGMSTELFNINKDTGLISLKAPLTDDTGLQYKI 8351

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             V A D+     +++V V+V    NT  PVF++  Y +NV +  ++   +  +    +  
Sbjct: 8352 RVVAYDSCNPVQKSVVMVTVSVVRNTDQPVFEKAEYAINVLDTVAVGKVIGKVKAVDMDE 8411

Query: 185  GCA 187
            G A
Sbjct: 8412 GSA 8414



 Score = 36.2 bits (82), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 24/164 (14%)

Query: 29   QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGV-NA 84
            Q   A V V +  NL D     P+      I+    E   A   I ++ ATD+D+   N 
Sbjct: 4750 QSATAMVQVDVQRNLFD-----PKFSSSGTIRASVAEIAPAGTSIWQLTATDSDVSAPNN 4804

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVI------ETTGKLIAGEQYSITVQATDTG--GKSS 136
             ITYS+    +   + F  +P +G I        TG+ +    Y +TV+A D G   +  
Sbjct: 4805 VITYSVVGDGDAPEY-FFCNPTNGEISLMQSVRYTGRSV----YVLTVRAEDHGVPARHK 4859

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             + VEV+V+      +  F  + YD  VSE A++ + V T+  S
Sbjct: 4860 DSTVEVTVLRDKGNLT--FSSDEYDAEVSENANVGTLVQTVRAS 4901


>gi|47227102|emb|CAG00464.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2970

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 15/192 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MI 56
            +VV +++LDR+  +  + R Q   +  Q  A S  V+LT+ + D+NDNAP        + 
Sbjct: 1934 MVVLEKSLDRESQDSYRLRVQATDQAGQRGALSTQVNLTILVLDVNDNAPVFQRRDYGVT 1993

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P  +  G    +++++ AT  D+G+NAEI+Y I   S   L KF ID   G I     L
Sbjct: 1994 VPEDVAVGT---EVLRVLATSVDIGLNAEISYRIR--SGNELGKFNIDTNLGSIFVADDL 2048

Query: 117  I--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 + Y +T++A D G    SS T+V + ++   N  +P F Q+ Y+V VSE AS+  
Sbjct: 2049 DFEVCKDYYLTIEAWDGGNPPLSSATVVTIDLM-DVNDNAPTFSQDIYNVLVSEDASVGQ 2107

Query: 173  TVATITVSRLAS 184
             V  ++   L S
Sbjct: 2108 MVTRVSAEDLDS 2119



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 11/184 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            ++ + E LDR+ P        V+A +  G A+    S+ V L D NDN PR   +   + 
Sbjct: 1298 IISTLEKLDRENPLYKDMVLTVMALDGGGRASFC--SVRVILADENDNPPRFRAVEYRMS 1355

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR--SGVIETTGKL- 116
            I+A  A+  +V +I+A+D D G N  ITYS+Y  +   L       R  SG + T   + 
Sbjct: 1356 IKANVAKGSLVTQIQASDPDAGSNGRITYSLYSEARLSLVDVLEVSRFYSGWMMTKSNVD 1415

Query: 117  -IAGEQYSITVQATDTGGKSSQTIVE--VSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             + G   S  V+ATD+G  +  ++V   + VVP P+   P F Q  Y   + E   + + 
Sbjct: 1416 HLQGTVLSFFVKATDSGSPAKHSLVSAFIHVVP-PDAFVPSFSQPQYSFTIPEDTVVGTA 1474

Query: 174  VATI 177
            + ++
Sbjct: 1475 LGSV 1478



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 18/153 (11%)

Query: 37  VSLTVNLNDINDNAPR---LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           V++ V + D+NDNAP    LP    +Q+ A E    I K+ A D D GVN E++YS+   
Sbjct: 785 VTVQVQVEDVNDNAPEFVNLPYYAAVQVDA-EPESAIFKVSAVDRDTGVNGEVSYSLKQ- 842

Query: 94  SNTGLHK-FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
                H+ F+++P +G +         ++  +Y + + ATD G    S +  + V+VV  
Sbjct: 843 ----QHRNFQMNPVTGELTLKKAFESDLSNAEYKLVLVATDGGFPPLSREVELPVTVV-- 896

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   PVF +  Y V V E  ++++++  I  S
Sbjct: 897 -NKAMPVFDKPFYGVTVREDVAVSTSILGINAS 928



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 11/172 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
            +++IA+   G        +++ + D+NDNAP    P       +    +  + +++A+D 
Sbjct: 1848 YKLIAQATDGGGLFCRSDISLKVLDVNDNAPTFSSPHYLASVYENAAPKALLTRLQASDP 1907

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSS 136
            D G+N  + Y++  +       F IDP SG  V+E +    + + Y + VQATD  G+  
Sbjct: 1908 DEGLNRTLVYTLDSIDEL----FSIDPVSGMVVLEKSLDRESQDSYRLRVQATDQAGQRG 1963

Query: 137  QTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                +V++   V   N  +PVFQ+  Y V V E  ++ + V  +  + +  G
Sbjct: 1964 ALSTQVNLTILVLDVNDNAPVFQRRDYGVTVPEDVAVGTEVLRVLATSVDIG 2015



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 12/173 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            FRF+V    ++    +V  V L V + D+NDN P       +   ++      ++V++ A
Sbjct: 1527 FRFKVAVTTRRDLIEAVTTVDLEVKILDVNDNNPLFETNTYVATVMEGMPIGTRVVQVRA 1586

Query: 76   TDNDLGVNAEITYSIYHVSN---TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             D D G N ++ Y     S+   T    F ID ++G I T  ++   A   YS  V A+D
Sbjct: 1587 LDPDWGANGQVCYVEAASSDGPITSSSVFAIDSKTGWITTVSEMDHEACSSYSFEVVASD 1646

Query: 131  TG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G     SS T+V ++ V   N   P F++  Y   V E  S+   VA +  S
Sbjct: 1647 LGELRSLSSTTVVTIA-VSDCNDNPPRFERELYRGAVKESDSLGEVVAVLKTS 1698



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT 96
            +T++L D+NDNAP     I  + +    +  Q+V ++ A D D   N  ITYSI      
Sbjct: 2076 VTIDLMDVNDNAPTFSQDIYNVLVSEDASVGQMVTRVSAEDLDSQGNGRITYSILKGDRN 2135

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              + F IDP +G+++   +L      +YS++VQA D+G  +  + V +++ +   N  SP
Sbjct: 2136 --NHFWIDPVTGILKVNKRLDRELVSRYSLSVQAFDSGSPAMSSTVTLNIDISDINDNSP 2193

Query: 154  VF 155
            VF
Sbjct: 2194 VF 2195



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
            + I+ + ATD D G +AEI YS++ +   G+  F +D  +G +  T  ++  E    Y +
Sbjct: 1795 KGILTVAATDADSGSSAEIQYSLFGI---GVEDFYMDANTGELR-TATIMDRETTPSYKL 1850

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
              QATD GG   ++ + + V+   N  +P F    Y  +V E A+
Sbjct: 1851 IAQATDGGGLFCRSDISLKVL-DVNDNAPTFSSPHYLASVYENAA 1894



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            M P +Q          +++ ATD D G+  +ITYS   V++ G  KF +D  +G+I T  
Sbjct: 1247 MCPAVQPLKPLECTMTLQVRATDEDSGLFGQITYSF--VNDLGKTKFAVDA-AGIISTLE 1303

Query: 115  KLI----AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            KL       +   +TV A D GG++S   V V ++   N   P F+   Y +++    + 
Sbjct: 1304 KLDRENPLYKDMVLTVMALDGGGRASFCSVRV-ILADENDNPPRFRAVEYRMSIKANVAK 1362

Query: 171  NSTVATITVS 180
             S V  I  S
Sbjct: 1363 GSLVTQIQAS 1372



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 10/145 (6%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNT 96
           + + D NDN P     P   +   E      ++V++ A+D D    A ++YSIY  V   
Sbjct: 161 IRVQDGNDNPPVFSQ-PAYDVSVSEDIPVDMELVRVRASDMD--ERARLSYSIYGSVDPA 217

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            +  FR++P +G++ TT +L   A  Q+ +T+   D     ++ +  + V V   N   P
Sbjct: 218 SMRLFRVNPGTGIVYTTDRLDYEARTQHILTIMVKDQEFPFNRDLARILVAVEDSNDNIP 277

Query: 154 VFQQNTYDVNVSEGASINSTVATIT 178
            F    YD    E +   ++V  +T
Sbjct: 278 YFTSTVYDAVAYESSPFGTSVLQVT 302



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)

Query: 39  LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           + V + D NDN P     +   +  ++      ++++ A D D G+N ++TY+I    NT
Sbjct: 265 ILVAVEDSNDNIPYFTSTVYDAVAYESSPFGTSVLQVTALDKDNGINGQLTYTI-EAGNT 323

Query: 97  GLHKFRIDPRSGV--IETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
           G   F ID  +G+  I     L +   Y++TV+ +D+G         V + +   +  SP
Sbjct: 324 G-SVFGIDAATGLIFIARALDLTSVGFYTLTVRVSDSGFPPLMATASVRISLMLSDYSSP 382

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRL 182
            F Q  Y   V    +  +TV  ++ S L
Sbjct: 383 KFSQKEYQAEVLTTGTHVATVTALSRSAL 411



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            +  ++A+D D+     + YSI  VS      F ++P +GV+  + K   G + S  +  +
Sbjct: 1130 VTCVQASDADICDAQRLRYSI--VSGNERMTFLMEPDTGVLRLSNKRRQGMKLSYQLNVS 1187

Query: 130  DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             + G  + T   +  V G N  SPVF Q  Y   V E A   S V  +++
Sbjct: 1188 VSDGVFTNTAQVIVQVLGANLYSPVFSQRFYLAEVQENAPPGSKVIQVSL 1237



 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
           F I+  +GVI T  KL+  EQ   Y + V A       + T V V V    N  SPVFQQ
Sbjct: 424 FYINHHTGVINTR-KLLDFEQTPSYFLVVHALSMTRMEASTTVTVQV-GDVNDNSPVFQQ 481

Query: 158 NTYDVNVSEGASINSTV 174
             Y   +SE A +NS V
Sbjct: 482 LRYVGTISEAAPVNSVV 498


>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
          Length = 4672

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 15/192 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMI 56
            +V+ +++LDR+     + R Q   R  Q  A S  V LT+ + D+NDNAP        + 
Sbjct: 3186 VVILEKSLDRESQESYRIRAQATDRVGQQGAMSSQVDLTILVLDVNDNAPVFQKRDYAVT 3245

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P  +  G    +++++ AT  D+G NAEITY+I   S   L KF I+ + G I     L
Sbjct: 3246 IPEDVAVGT---EVLRVLATSADIGPNAEITYTIR--SGNELGKFIINRKLGSISVADDL 3300

Query: 117  I--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 + Y ITV+A D+G    S+ T+V + ++   N  +P F Q+ Y+V +SE AS+  
Sbjct: 3301 DFEVCKDYYITVEAWDSGNPPLSTATMVVIELM-DVNDNAPTFDQDVYNVLISEDASVGQ 3359

Query: 173  TVATITVSRLAS 184
            TV  ++   L S
Sbjct: 3360 TVTRVSAEDLDS 3371



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 10/178 (5%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE 65
            E LDR+ P        V+A +  G A+   V   V L D NDNAP+   +   + I+A  
Sbjct: 2542 EMLDRENPLNKDMVLTVMALDGGGRASFCTVR--VVLADENDNAPKFRAVEYRMSIKANV 2599

Query: 66   ARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKL--IAGEQ 121
            A+  +V +I+ATD D G N  ITYS+Y  +   L     ++  SG + T   +  + G  
Sbjct: 2600 AKGSLVTQIQATDPDAGSNGRITYSLYSEARLSLVDVLEVESDSGWMMTKSTVDHLQGTV 2659

Query: 122  YSITVQATDTGGKSSQTIVE--VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             S  V+ATD G     ++V   + VVP P+   P F Q  Y   + E  S+ + + ++
Sbjct: 2660 LSFFVKATDGGSPPKHSLVSAFIHVVP-PDAYVPSFSQPQYSFTIPEDTSVGTALGSV 2716



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 16/152 (10%)

Query: 37   VSLTVNLNDINDNAPR---LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V++ V + D+NDN P    LP    +Q++A      I ++ A D D G N E+TYS+   
Sbjct: 2054 VTVQVQVEDVNDNVPEFVNLPYYAAVQVEAVPGS-VIFRVSAVDRDYGPNGEVTYSL--- 2109

Query: 94   SNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGP 148
                   F I+P +G +      G  ++  +Y +TV ATD G    SS+  + V+VV   
Sbjct: 2110 -KMQQRNFEINPVTGELILKRAFGANLSNTEYKLTVVATDGGFPRLSSEVPLPVTVV--- 2165

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   PVF ++ Y V V E  ++ ++V  I  S
Sbjct: 2166 NKAMPVFDKSFYGVTVREDVAVFTSVLCINAS 2197



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 9/155 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++  T  S  V + + + D+NDNAP    P+  P+ ++       +++I+A 
Sbjct: 1096 YWLTVVATDRGATPLSASVEVFIEIEDVNDNAPLTSDPIYHPVIMENSPKDVSVIQIQAQ 1155

Query: 77   DNDLGVN-AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            D DL    + ++Y I   +    + F I+PR+G+I TT + +  EQ   + + V   D+ 
Sbjct: 1156 DPDLSTKPSRLSYRI--TAGNPQNFFSINPRTGLITTTARKLDREQQAEHFLEVTVIDSP 1213

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              + Q+ V V V +   N   P F + TY +++ E
Sbjct: 1214 VTTRQSTVWVIVHIEDENDNRPTFPEATYRISLPE 1248



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDN 78
            + +IA+   G        +++ + D+NDNAP       +    +    +  + +++ATD 
Sbjct: 3099 YNLIAQATDGGGLFCRSDISLKVLDVNDNAPLFSSTHYLASVYENAAPKALLTRLQATDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATD----TG 132
            D G+N  + YS+    N G   F ID  SGV+  E +    + E Y I  QATD     G
Sbjct: 3159 DEGLNRTVVYSLVDSFN-GF--FSIDSLSGVVILEKSLDRESQESYRIRAQATDRVGQQG 3215

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              SSQ  + + V+   N  +PVFQ+  Y V + E  ++ + V  +
Sbjct: 3216 AMSSQVDLTILVL-DVNDNAPVFQKRDYAVTIPEDVAVGTEVLRV 3259



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 12/155 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V++ D NDN P  P     +I   E  R      + ++ A D D G N  ITYSI 
Sbjct: 1221 VWVIVHIEDENDNRPTFPE-ATYRISLPERDRNRRVEPVYRVFAYDRDSGANGNITYSI- 1278

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
                     + IDP++ ++ +   + AG    +T++A D G      S +  +E    P 
Sbjct: 1279 -TDGNEEDNYSIDPKTAMVSSKKMVPAGSYDILTIKAEDNGDPPLWSSVKLYIEWIRKPI 1337

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            P+    +F Q  Y+ +V E  ++   V  + VS+L
Sbjct: 1338 PSKMPLLFTQRHYNFSVPESTAVAQPVGVVAVSQL 1372



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 34   SVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIY 91
            S    + + L D+NDNAP     +  + I    +  Q V ++ A D D  VN  ITYSI 
Sbjct: 3323 STATMVVIELMDVNDNAPTFDQDVYNVLISEDASVGQTVTRVSAEDLDSQVNGRITYSIL 3382

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
                +  + F IDP +G+++   KL       Y+++VQA D+G  +  T V V++ +   
Sbjct: 3383 KGDRS--NHFWIDPVTGLLKVNKKLDRELVSMYTLSVQAFDSGSPAMSTRVTVNIDISDV 3440

Query: 149  NTRSPVF 155
            N   PVF
Sbjct: 3441 NDNPPVF 3447



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V + DINDN P         +  +   A   ++++ A D D G+N ++TYSI   +  
Sbjct: 1534 IVVAVEDINDNVPFFTRTTYDAVVYETSPAGYSVLQVTALDKDSGINGQLTYSIEAGNTR 1593

Query: 97   GLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS 152
            G+  F ID  +G I     L   +   Y++TV+ TD G    S+  +V +S++    ++ 
Sbjct: 1594 GV--FIIDNATGRISIAKDLDITSVGFYTLTVRVTDNGFPPLSATALVRISLMLSDFSK- 1650

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F Q  Y   V E ++  + V T+T
Sbjct: 1651 PKFFQKEYQAEVMENSNSGTHVTTVT 1676



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 12/116 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSI 124
            +++++ ATD D G+N +ITYS   +++ G  +F ID   GVI T   L       +   +
Sbjct: 2500 RVIQVRATDEDSGLNGQITYSF--INDLGKSQFTIDA-DGVISTVEMLDRENPLNKDMVL 2556

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV----NVSEGASINSTVAT 176
            TV A D GG++S   V V V+   N  +P F+   Y +    NV++G+ +    AT
Sbjct: 2557 TVMALDGGGRASFCTVRV-VLADENDNAPKFRAVEYRMSIKANVAKGSLVTQIQAT 2611



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 8/105 (7%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
            + I+ + ATD D G +AEI YS++ +   G+  F +D  +G +  T  ++  E    Y++
Sbjct: 3046 KGILTVSATDADSGSSAEIQYSLFGI---GVEDFYMDANTGELR-TATVMDRELVPTYNL 3101

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
              QATD GG   ++ + + V+   N  +P+F    Y  +V E A+
Sbjct: 3102 IAQATDGGGLFCRSDISLKVL-DVNDNAPLFSSTHYLASVYENAA 3145



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + + D NDN P     P   +   E   A  +++++ ATD D    A +++S+Y   + G
Sbjct: 1430 IRVQDSNDNPPVFSQ-PTYDVTVSEDAPADMELLRVRATDID--ERARLSFSMYASVDPG 1486

Query: 98   -LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             +  FR+ P +GVI T  +L   A  Q+ +TV   D     ++ +  + V V   N   P
Sbjct: 1487 SMRLFRVSPGTGVIYTADRLDYEARTQHILTVMVKDQEFPFNRDLARIVVAVEDINDNVP 1546

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             F + TYD  V E +    +V  +T     SG
Sbjct: 1547 FFTRTTYDAVVYETSPAGYSVLQVTALDKDSG 1578



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 25/183 (13%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +RF+V A  ++    SV  V + V + D+NDN P       +   ++   A  +++++ A
Sbjct: 2765 YRFKVAAMTRRDLTESVTTVDVEVKILDVNDNQPVFETNAYVATVMEGMPAGTRVIQVRA 2824

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK----------------FRIDPRSGVIETTGKLI-- 117
             D D G N ++TYS+  +    L                  F ID ++G I T G++   
Sbjct: 2825 LDPDWGSNGQVTYSLGALLTYNLDLTINAPYLTSAITTSSVFAIDSKTGWITTVGQMDHE 2884

Query: 118  AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            A   YS  V A+D       SS  +V ++ V   N   P F +  Y   V E   +   V
Sbjct: 2885 ACSSYSFEVVASDLAELLPLSSSAVVTIT-VSDINDNPPQFDREFYRGAVKESDPLGEVV 2943

Query: 175  ATI 177
              +
Sbjct: 2944 VVL 2946



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            NLD +  +   FR QV    +    A  P  + + + +IND+ P+    M   I +    
Sbjct: 1820 NLDYETFSEFLFRVQVQDSGEPSLCADSPAEVFIKVININDSPPKFSQEMYETILLLPTY 1879

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI 124
               ++++IEA D D+      T  +Y+ + ++ +  F +D  SGV+    K ++ E+Y  
Sbjct: 1880 VGVEVLRIEALDPDMIPGESTTPKLYYSLVDSSMEYFFVDRYSGVVTVANKNLSKERYRF 1939

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V+  D  G+ S     +  V         F    +  ++SE  S N T+ TI
Sbjct: 1940 NVRVWD--GRFSSIASVIVFVKDAMDSDLFFPVPVFSGSISENVS-NVTLVTI 1989



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 2/116 (1%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            +V ++A+D D+    ++ YSI  +S      F ++P +GVI  + K   G + S  +  +
Sbjct: 2399 VVCVQASDADICDAQKLRYSI--LSGNEKMTFMMEPHTGVIRLSNKRRQGMKLSYQLNVS 2456

Query: 130  DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + G  + +   V  V G N  SPVF Q  Y   V E +S  S V  +  +   SG
Sbjct: 2457 VSDGVFTNSAQVVVRVLGANLYSPVFSQRFYLAEVPENSSPGSRVIQVRATDEDSG 2512



 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 11/140 (7%)

Query: 46  INDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           +N+ AP+   +P  I ++   A    + ++ A D D G N  + +SI   +    + F I
Sbjct: 702 LNNQAPQFEALPTSILVREDLAPGASVFQVRARDGDSGFNGRVLFSISDGNKE--NSFNI 759

Query: 104 DPRSGVIETTGKLIAGEQ---YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
           D  +G+I T  + +  EQ   Y + +   D G    SS  ++ V ++   N   P F Q+
Sbjct: 760 DMDNGLI-TVLQPLDREQLDRYFLNITIYDQGIPTMSSWRLLTV-IIEDANDNDPRFYQD 817

Query: 159 TYDVNVSEGASINSTVATIT 178
            Y   V+E ++I S V TIT
Sbjct: 818 NYSAVVAENSAIGSEVITIT 837



 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 54   PMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
            P  P   ++        A   ++ + A D+D G +  + YSI     +GL  F ID  +G
Sbjct: 1023 PYFPDFAVRGSVKENSRAGTSVLPVTAKDDDNGRDGTLRYSIR--GGSGLGTFTIDEDTG 1080

Query: 109  VIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV 144
            +I T G L     + Y +TV ATD G       VEV +
Sbjct: 1081 MIYTAGILDCETKDSYWLTVVATDRGATPLSASVEVFI 1118



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           + + D N+N+P   + PP  I   E+      ++ + A D+D G N  ITY+I   +   
Sbjct: 444 ITIEDANNNSPVF-IRPPSTIAINESLPVGTVVLVVSAVDDDKGENGYITYTI---NGDQ 499

Query: 98  LHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTR 151
              F I   +G +  T  L    + + Y+  V+A+D G    + S+  V + V+   N  
Sbjct: 500 SLPFAIQQHTGELRITRDLDFESSKDTYTFAVRASDWGSPYRRESELNVTIRVI-NINDN 558

Query: 152 SPVFQQNTYDVNVSEGASINSTVATIT 178
            P+F++ +    VS    +N T+ T++
Sbjct: 559 PPLFEKTSCRGMVSRDFPVNRTIVTLS 585


>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
 gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
          Length = 4039

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 14/181 (7%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQ 69
            NP   +F VIA ++     S  V++ +N+ D ND+AP    +      P   Q GE    
Sbjct: 2908 NPNHHQFVVIATDRGTPPLSGEVTVIINIIDANDHAPVFQEVSYFSPVPENAQIGE---M 2964

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSIT 125
            I+++ A DN D+G NAE+ YSI   + T  + F ID  +G +  +  L +G Q   YS+T
Sbjct: 2965 IIQVLAVDNQDIGSNAEVEYSITGGNGTNPNLFSIDRTTGWVSVSASL-SGRQNIWYSVT 3023

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            VQA D G  +  T  +VS+ V   N  +P F   +Y V + E   +NS V T+  +   S
Sbjct: 3024 VQARDQGSPALSTTTDVSILVTDVNVYAPAFSAPSYQVTIEESRPMNSHVFTVVATDRDS 3083

Query: 185  G 185
            G
Sbjct: 3084 G 3084



 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 15/168 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVK 72
            +   + AR++        V LTV+L D+NDN P        P IP    +   +   +V 
Sbjct: 3125 YHLNISARDRGLLYRENFVILTVDLTDVNDNDPMFDPATYDPSIP----ENSPSGTSVVM 3180

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            + ATD D G NA I Y I      G   F ID  +G I + G L    +   T+Q T T 
Sbjct: 3181 VTATDADTGANAAIRYQI--TGGDGQDLFIIDAVTGEITSQGGLDYERKQMYTLQVTATN 3238

Query: 133  GKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++S      +V   + G N  +PVF Q  Y   +SE A   +TV T+
Sbjct: 3239 VEASSRFGTCTVNIHLTGQNEYAPVFLQRLYTFEISESAETGTTVGTV 3286



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 11/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
            +   V AR++   A S    +++ + D+N  AP     P  Q+   E+R     +  + A
Sbjct: 3020 YSVTVQARDQGSPALSTTTDVSILVTDVNVYAPAFSA-PSYQVTIEESRPMNSHVFTVVA 3078

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG 132
            TD D GVN EI YSI  V      +F IDPR+G + T   ++  E    Y + + A D G
Sbjct: 3079 TDRDSGVNGEIRYSI--VGGDDYRQFYIDPRTGSV-TVAAVLDYETTPTYHLNISARDRG 3135

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
                +  V ++V +   N   P+F   TYD ++ E +   ++V  +T +   +G 
Sbjct: 3136 LLYRENFVILTVDLTDVNDNDPMFDPATYDPSIPENSPSGTSVVMVTATDADTGA 3190



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V L D+NDN P   +    Q  A E     R++ +  A D D GVNA++TY +  ++N
Sbjct: 890  VNVTLRDLNDNPPSF-LTSSAQADAVENWPLGREVYEAAAQDPDDGVNAQVTYEL--ITN 946

Query: 96   TGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSP 153
               +KF+++  SG++   G L     QY + +QATD G    S T+     V   N  +P
Sbjct: 947  PS-NKFQVNGDSGIVSLAGALSYEVGQYVLELQATDRGLPPQSATLTLTVTVRDVNDHAP 1005

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            VF  ++Y   + E   +N    ++T +   +G
Sbjct: 1006 VFSSSSYSTAIPESQPVNDQFFSVTATDEDAG 1037



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 14/157 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE-ARR--QIVKIEATDNDLGVNAEITYSIYHVS 94
            +L + + DINDN PR       Q+   E A+R  Q+V++ A+D D G NA + Y+I   +
Sbjct: 1205 TLQITVRDINDNVPRFAQ-DTYQVSISENAQRSQQVVRVSASDMDYGNNALVRYTITEGN 1263

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK---SSQTIVEVSVVPGP 148
            + G  KF ID  SG I    +L+  E    YS+ V   D+  +   SSQ  V +SV+   
Sbjct: 1264 DEG--KFLIDSSSGQI-MLAQLLDREVEDFYSLLVDVRDSASENPLSSQCRVNISVL-DE 1319

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   PVF       +V E   +N  + T+T +   +G
Sbjct: 1320 NDNEPVFSPTLQTADVLESTRVNDLITTLTATDGDAG 1356



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 23/179 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+  +   +   VIA E     A+ P+S+T+   D+NDN PR   P+      +   A
Sbjct: 2797 LDREISD--HYELLVIA-EDSAWEANTPLSITIL--DVNDNPPRFSAPVFERNLPEGIRA 2851

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAG-- 119
             + + ++ ATD D G NAE+ Y +  +SN     FR+D  SG I T   L       G  
Sbjct: 2852 NQLVTRLVATDEDEGTNAEVFYRMKTLSN----FFRLDESSGAILTKNSLEFVPDWTGTT 2907

Query: 120  --EQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                +   V ATD G    S +  V ++++   N  +PVFQ+ +Y   V E A I   +
Sbjct: 2908 NPNHHQFVVIATDRGTPPLSGEVTVIINIIDA-NDHAPVFQEVSYFSPVPENAQIGEMI 2965



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 39  LTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSN 95
           LT+ + D ND  P     P     ++   A R+++ + A D+D G N E+ Y      +N
Sbjct: 577 LTITIIDENDFVPTFSESPYNVTVLENQSAPREVITVTAQDDDQGSNGEVYYEFDTETAN 636

Query: 96  TGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTRS 152
                FR+D  +G I+T  T      + YS+ V+A+D G    Q+ V V+V+ G  N  +
Sbjct: 637 RYSGSFRLDSNTGRIDTLVTFDRETTDLYSLVVRASDRGNPPQQSAVRVNVIVGDLNDNN 696

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           PVF    Y  ++ E     ++V  ++ S L +G
Sbjct: 697 PVFYPVRYYASIRENQPSGTSVVQVSASDLDAG 729



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 15/153 (9%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           V + V + D+NDN P   +  P++  A     Q     +V++ A+D D G+N  +TY I 
Sbjct: 683 VRVNVIVGDLNDNNP---VFYPVRYYASIRENQPSGTSVVQVSASDLDAGLNGRVTYQIT 739

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT--IVEVSVVPG 147
             +  G  KF I P+SG I TT +L       Y + V A D  G+SS +   ++V+VV  
Sbjct: 740 RGNPDG--KFTISPQSGQITTTAELDREVRASYQLEVTARDGTGQSSASPATIDVTVVDI 797

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   P F Q  Y+  + E   I  +V  ++ +
Sbjct: 798 QD-NPPEFSQPGYNFVIFENVEIGKSVGMVSAT 829



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 14/170 (8%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQI 70
            G++  ++ A ++     S  ++LTV + D+ND+AP          IP  Q        Q 
Sbjct: 971  GQYVLELQATDRGLPPQSATLTLTVTVRDVNDHAPVFSSSSYSTAIPESQ----PVNDQF 1026

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQAT 129
              + ATD D G+N  I+YSI    N G  +F + P   + +          +Y + V+A 
Sbjct: 1027 FSVTATDEDAGLNGLISYSITG-GNPG-DRFGVFPDGNLYVRNALDREVQSRYVLIVEAQ 1084

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G ++   +  V+V +   N   P+F  +TY++ + E A   + VA +T
Sbjct: 1085 DNGVEAKSAVANVTVEILDENDNRPLFANSTYNLFLDEEAPAQTMVALVT 1134



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIE 74
             F   + AR+    A S    LT+ L D+NDN P     P +    GE       ++ + 
Sbjct: 2590 SFNLWMEARDSDTPALSSYHRLTIALADVNDNPPIFSQDPYVG-SVGENEGTLTSVLTVS 2648

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDT 131
            A+D D G N E  Y +    N   + F+++P +G + +T + +  EQ   YS+ V+A D 
Sbjct: 2649 ASDADSGSNGEFEYRLRAAGNLD-NSFQVNPNTGQV-STRRFLDREQRDSYSLVVEAVDK 2706

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +      V +       +P+  +N Y  ++ E   I S V  ++ +
Sbjct: 2707 GSPTLTGTATVLITVEDKNDNPMQFRNLYSTSILEDTPIGSFVIQVSTT 2755



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 22/195 (11%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQ 62
           + +NLDR+     +  +Q+    + G +      L VN++  D NDN P       I + 
Sbjct: 222 TNQNLDREI----RSSYQLNISAQDGGSPPRYGYLLVNISVRDSNDNPPIFDQSEYI-VS 276

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E+      ++ + ATD D G NAEITY +   S     KF+IDPR+GV+ T  +L   
Sbjct: 277 LNESAPIGTSVLTVRATDIDEGTNAEITYLL--DSGEPATKFQIDPRTGVVTTLQELDYE 334

Query: 120 EQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDV-----NVSEGASI 170
           E   Y + VQA D G   +  +  + +++V   N   PV     + +     +V E A++
Sbjct: 335 ESDNYYVNVQAHDNGSPIQYGRAYITINLV-DENDHDPVIGFRYFPIGAQFASVEEDAAL 393

Query: 171 NSTVATITVSRLASG 185
           N+ V  +T++    G
Sbjct: 394 NTVVTLVTITDADQG 408



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 18/167 (10%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSI 90
           + P+ + +++ DINDN+P  P  P IQI   E+ R   Q++   ATD D+G N++IT + 
Sbjct: 135 TYPIEVRIDILDINDNSPIFPD-PSIQISFSESARTGSQVILDTATDADIG-NSDITDNY 192

Query: 91  YHVSNTGLHKFRI----DPR---SGVIETTGKLIAGE---QYSITVQATDTGG--KSSQT 138
             VS    + F +    +P    S +   T + +  E    Y + + A D G   +    
Sbjct: 193 RIVSGNANNTFELVVTTNPSGEASFLHLQTNQNLDREIRSSYQLNISAQDGGSPPRYGYL 252

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +V +SV    N   P+F Q+ Y V+++E A I ++V T+  + +  G
Sbjct: 253 LVNISVRDS-NDNPPIFDQSEYIVSLNESAPIGTSVLTVRATDIDEG 298



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 29   QGTAASVPVS--------LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDND 79
            + T  ++PVS        +TV + D+NDN P         I    +R  +V  + A D D
Sbjct: 1508 RATDQAIPVSERRHAFKVITVIIRDVNDNNPLFVSQDAAAIAPSASRGDVVLNVVAEDPD 1567

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTG-GKSSQ 137
             G N E+ Y+    ++   ++F I   +GV+     L   +  Y++ V ATD G G+ S 
Sbjct: 1568 EGTNGEVRYA---ETSGNTNQFDIGGTTGVVTLAQNLSPSQTFYTLVVSATDQGPGRRSS 1624

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            T      +  PN   P F +++Y   V E   + ++V ++  S
Sbjct: 1625 TSEITFFITSPNNNGPAFSRSSYSGIVRENQPVGTSVTSVRAS 1667



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 15/176 (8%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLN----DINDNAPRLPMIPPIQ----IQAGEARRQIVK 72
            F  +  + + +A+  P+S    +N    D NDN P     P +Q    +++      I  
Sbjct: 1290 FYSLLVDVRDSASENPLSSQCRVNISVLDENDNEPVFS--PTLQTADVLESTRVNDLITT 1347

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + ATD D G N EITYSI   +  G   F +D  +G +     L   +   Y + + A+D
Sbjct: 1348 LTATDGDAGSNGEITYSISEGNAHG--TFTLDSYTGKLYLAKALDYESTNVYRLNITASD 1405

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G     T++  ++ V   N   P F        ++EG  +N+ +AT+T +   SG
Sbjct: 1406 HGTPPLSTVIPFAINVLDSNDNPPTFPPGDTVRQITEGVGLNTVIATVTATDPDSG 1461



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 17/180 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            ++   V A++    A S   ++TV + D NDN P            +   A+  +  + A
Sbjct: 1076 RYVLIVEAQDNGVEAKSAVANVTVEILDENDNRPLFANSTYNLFLDEEAPAQTMVALVTA 1135

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---------YSITV 126
             D D G NAE+ YS      T    F I+P +G I +  ++   E+         +++ V
Sbjct: 1136 VDRDAGTNAELRYSFI----TEQSDFAINPSTGAISSL-RMFDREELIQRTGLSTFTLEV 1190

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              TD G    Q    + + V   N   P F Q+TY V++SE A  +  V  ++ S +  G
Sbjct: 1191 AVTDGGDPPLQDRATLQITVRDINDNVPRFAQDTYQVSISENAQRSQQVVRVSASDMDYG 1250



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 43   LNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            +NDINDN PR   P +  +  +       ++ I A D D   N+ + YS+  +     +K
Sbjct: 1991 VNDINDNPPRFVTPNVTSV-YENSPVNTVVMTIRAEDPDEERNSYVEYSMASIPG---NK 2046

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            F +D  +G +   G L   A   Y +TV ATD G       +++++ +   N  +PVF  
Sbjct: 2047 FALDSVTGQLRVNGDLDREATPSYIVTVTATDKGRPPMSASMDLTINLLDRNDNNPVFGP 2106

Query: 158  NTYDVNVSEGASINSTVATITVSRLASG 185
             +YDV+V E  ++ + +  +  + +  G
Sbjct: 2107 VSYDVSVLEDVAVGTELVQVVAADVDEG 2134



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVK-IEAT 76
            +R  + A +      S  +   +N+ D NDN P  P    + QI  G     ++  + AT
Sbjct: 1397 YRLNITASDHGTPPLSTVIPFAINVLDSNDNPPTFPPGDTVRQITEGVGLNTVIATVTAT 1456

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D D G N EI YSI      G  +F ++P SG + T  ++       + ITV+ATD
Sbjct: 1457 DPDSGSNGEIQYSIASQVPQG-DQFAVNPSSGQVFTRAEIDREFASTFDITVRATD 1511



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 9/145 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           + +   LDR+      ++ +V AR+  G +++ P ++ V + DI DN P    P    + 
Sbjct: 756 ITTTAELDREVR--ASYQLEVTARDGTGQSSASPATIDVTVVDIQDNPPEFSQPGYNFVI 813

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            +  E  + +  + AT  D   NA  TYSI+     G+  FRI+ ++G+I T  ++   +
Sbjct: 814 FENVEIGKSVGMVSATFRD--ANANATYSIFSGDPAGI--FRINSQTGLISTAKEVDREQ 869

Query: 121 QYSITVQATDTGGK-SSQTIVEVSV 144
           Q    +    +GG+   QT V V++
Sbjct: 870 QQLYQLFVVASGGRVVGQTQVNVTL 894



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQ------IVKIEATDNDLGVNAEITYSIY 91
           +T+NL D ND+ P +     PI  Q             +  +  TD D G N ++   I 
Sbjct: 359 ITINLVDENDHDPVIGFRYFPIGAQFASVEEDAALNTVVTLVTITDADQGPNGDVDLEIL 418

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
             +  G  +    P   +++    L     +QY++T++ATD G    +TI  + + V   
Sbjct: 419 SGNEQGTFQVTHVPGLSIVKVARSLDREITDQYNLTMRATDHGNPPRRTIANLIIYVNDI 478

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           N   PVF++  Y+  +SE   I S V  +T +   SG
Sbjct: 479 NDHEPVFERTRYNTTLSERVPIGSYVQGVTATDDDSG 515



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 22/149 (14%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ L D NDNAP      R   IP      G     +  + A D D+G NA + YSI  
Sbjct: 1739 VTITLEDENDNAPMFNTDYRDISIPEDLASGG----LVTTVVANDADVGSNAVVLYSII- 1793

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
              + G+   R   R    E T      + Y +TVQA D GG++S   V V+ V   N   
Sbjct: 1794 AGDDGVIILR---RPLDYEQT------QHYVLTVQARDGGGRASSVTVYVN-VKDLNDNP 1843

Query: 153  PVFQQNTYDV-NVSEGASINSTVATITVS 180
            PVF  + Y   ++SE     +++ T++ +
Sbjct: 1844 PVFDPDRYSADDISEDVPAGTSILTVSAT 1872



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 44/164 (26%)

Query: 39  LTVNLNDINDNAP-------------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
           L + +NDIND+ P             R+P+   +Q            + ATD+D G+NA+
Sbjct: 471 LIIYVNDINDHEPVFERTRYNTTLSERVPIGSYVQ-----------GVTATDDDSGLNAQ 519

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----------IAGEQYSITVQATDTGGK 134
           + Y+I  VS      F ID  +G++ T   L           I+     I++Q T     
Sbjct: 520 VRYAI--VSGNEYGWFMIDGNTGLVTTQADLDHEVASGVVLNISASDQGISIQFT----- 572

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            S T + ++++   N   P F ++ Y+V V E  S    V T+T
Sbjct: 573 -SYTQLTITII-DENDFVPTFSESPYNVTVLENQSAPREVITVT 614



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 12/146 (8%)

Query: 38   SLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++TV ++D++DN P      +    P     G     +    ATD D G N ++ YS+  
Sbjct: 2404 TVTVTVSDVDDNVPAFVDRSIDAYLPDNAPTGTF---VALASATDPDEGTNGDVRYSL-- 2458

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI-AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             S +  ++F ID  +GVI T   L  +  QY++ + A+D G  +      V++   P   
Sbjct: 2459 -SGSDANRFTIDRVTGVISTAMTLSDSSSQYNLQITASDLGPNAGTDTASVTINFQPAAS 2517

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P     T   N  E  S+ + + ++
Sbjct: 2518 FPSISVGTDTFNYPETQSVGTVLTSV 2543



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 12/150 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-- 59
            ++ +   LDR+  +   +   V A +     A+    + VN++DINDN P    IPP   
Sbjct: 3427 IISTASRLDRETID--TYNLTVTATDTGIPPATGTTYVVVNIDDINDNGPEF--IPPNVT 3482

Query: 60   -QIQAGEARRQIVKIEATDNDLGVN-AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              +    A   ++ + ATD DL  N    +Y +    N+    F +D  SG + TT ++ 
Sbjct: 3483 GYVLENRAPTTVMTLSATDPDLDPNRGPFSYRLIGGHNS--QYFTLDQGSGRLSTTRQID 3540

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
              +Q  + + V+ TD+G  S  +   V +V
Sbjct: 3541 REQQSDFYLIVETTDSGSPSMSSTHTVHIV 3570



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 9/150 (6%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
            V A +K     S  + LT+NL D NDN P   P+   + +    A   ++V++ A D D 
Sbjct: 2074 VTATDKGRPPMSASMDLTINLLDRNDNNPVFGPVSYDVSVLEDVAVGTELVQVVAADVDE 2133

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQ 137
            G N  + YSI  VS    +   I+  +G I +  +LI  E+   Y++ V+A D G    +
Sbjct: 2134 GTNGVVRYSI--VSGNTDNDLAINAVTGRI-SVARLIDHERTTGYNLVVRARDQGTSPLE 2190

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             +  V++ V   N   P+F  + +  +V E
Sbjct: 2191 ALATVTITVTDVNDYVPLFLNSPFVAHVME 2220


>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
          Length = 2755

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 13/172 (7%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEA 75
            + F+ +A ++ +  A S  VS+ V +ND+NDN P     P  +  A      + ++++ A
Sbjct: 1320 YHFEAVATDQGRYIARSQRVSVEVIINDVNDNKPIFTKYPFREQMATLTPPGQSLLRVSA 1379

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            TDND+G+NAEI   +Y + +T  +KFRI+P +G++  T  L +  G+   + V A D G 
Sbjct: 1380 TDNDIGINAEI---LYELLDTSSNKFRINPTTGILTATQSLASENGKLIHLKVMAKDKGS 1436

Query: 134  --KSSQTIVEVSVVPGPNTRSP--VFQQNTYDVNVSEGASINSTVATITVSR 181
              +SS  ++E+  V   N ++P   FQ NTY++ + EG++    +  +T  R
Sbjct: 1437 PPQSSVGLIEIR-VGDYNDQNPSLTFQNNTYNITLEEGSAYGKEILQVTALR 1487



 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 13/180 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ +KE LDR+  N   +     AR++     SV V +T+ + D+NDN+P +       I
Sbjct: 555 VITAKEVLDREYKN--TYLLFAEARDQGTLPKSVRVPVTIKVTDVNDNSPEI-------I 605

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGE 120
              E    + +++A D D G+NA + YSI +  +  G   F ID  +GVI+T+  L   E
Sbjct: 606 DPREDVVSVSRVKAIDRDNGINASVLYSILNERDMDGFGVFVIDSNTGVIKTSTVLDHEE 665

Query: 121 Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +  Y +TV ATD G    QT+ ++ V V   N   P F  ++    V E A +   V  +
Sbjct: 666 RSIYRLTVAATDGGNPPRQTVRQLKVEVLDLNDNRPTFTSSSLTFKVREDAEVGHVVGKV 725



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           S  ++L V++ DINDN+P           +++   + +I++++A D D G NA ITY + 
Sbjct: 375 SANLTLVVDVQDINDNSPVFEHDTYTANVLESDAVKTKILEVQAIDKDTGNNARITYRVV 434

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
             +NT    F++ P +G +     L    IA  ++ +T+ ATD G     T   + V V 
Sbjct: 435 SENNTNEEHFKVQPSTGWVYLAKALDRESIA--KHKMTIIATDNGIPPLSTTASLIVNVV 492

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N   P F Q +Y+  V E   + + V  I+ +
Sbjct: 493 DANDNDPAFSQASYEFLVEENQKVGAFVGKISAT 526



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL------PMI 56
            ++ + LDR+     K+   ++A +     A     +LTV + D NDN P          I
Sbjct: 1202 LTAKTLDRE--TQAKYDLTIVAYDHGSPVALQGACNLTVMVEDQNDNDPVFDTGHYSATI 1259

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P    +       I+K+ ATD DLG N  I YS+ + S  GL  FRID +SGVI TTG  
Sbjct: 1260 P----EDASIDTSIIKVRATDADLGFNKRIVYSLANESQ-GL--FRIDNKSGVIYTTGYF 1312

Query: 117  IAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQ 157
               +   Y     ATD G    +S +  VEV ++   N   P+F +
Sbjct: 1313 DREKTSIYHFEAVATDQGRYIARSQRVSVEV-IINDVNDNKPIFTK 1357



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 24/186 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            V  K  +DR+  +  ++ F V   +    Q TA     +++VN+ D+NDN+P   +    
Sbjct: 1094 VTVKTKIDREEAD--QYIFPVYVTDSSTFQSTANFDVATVSVNVLDVNDNSPTFKIGSCY 1151

Query: 60   QIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             +   E      I  + ATD D+G N  ITYSI   +N   +KF ID       TTGKL 
Sbjct: 1152 TLTVPENNEPEVIHTVTATDKDIGANGVITYSISSGNNG--NKFTIDA------TTGKLT 1203

Query: 118  AG-------EQYSITVQATDTGGKSS-QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            A         +Y +T+ A D G   + Q    ++V V   N   PVF    Y   + E A
Sbjct: 1204 AKTLDRETQAKYDLTIVAYDHGSPVALQGACNLTVMVEDQNDNDPVFDTGHYSATIPEDA 1263

Query: 169  SINSTV 174
            SI++++
Sbjct: 1264 SIDTSI 1269



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 13/145 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSI--- 90
            V + V + D NDN P  P+    +   GE  R    +    ATD D G    + YSI   
Sbjct: 2073 VFIKVQILDENDNTPTFPVSEYFE-TIGENERVGTSVFTARATDLDKGKYGILNYSIEPM 2131

Query: 91   ---YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
               Y+ ++     F+IDP +G++ T       ++  Y  +++A+D GGKSS   V +  V
Sbjct: 2132 SSNYNRNDDSWKMFQIDPVTGLVNTNAVFDYEQKNKYEFSIKASDLGGKSSSVKVRID-V 2190

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   P F Q TY+  V +  S+
Sbjct: 2191 ESHDEFYPQFTQKTYNFGVPKSGSL 2215



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 12/145 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTG 97
           + L D+NDN P       +++   E+ +    +    ATD D G N  +TY +  VS TG
Sbjct: 276 ITLEDVNDNVPEFGT-SSVRVSVAESAQIGSIVYAARATDEDEGKNGMVTYQL--VSATG 332

Query: 98  -LHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG-KSSQTIVEVSVVPGPNTRS 152
             + F ++ + G++ T  +L+  E   ++++ + A D+G  + S  +  V  V   N  S
Sbjct: 333 PANTFAVNSQHGLV-TLLRLLDYENLVRHTVIISAQDSGNPQLSANLTLVVDVQDINDNS 391

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           PVF+ +TY  NV E  ++ + +  +
Sbjct: 392 PVFEHDTYTANVLESDAVKTKILEV 416



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQ-AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +LT+ + DINDN P    I   ++   G    +I  + A D D   N +ITYSI   S  
Sbjct: 1757 TLTIKITDINDNTPVFDDITYNRVLPEGSGILEIGCVSAKDIDSEENGKITYSILDPS-- 1814

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGGKSSQTIVEVSVVPGPNTR-SP 153
                + ID  +GV+      + G +    I V ATD G  +   +    +  G ++   P
Sbjct: 1815 --PGYYIDAETGVLFVNYSALPGSKRDKQIPVIATDHGKPNRSAVASFRISTGASSEIKP 1872

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
               Q+TY ++VSE +   ST+  I
Sbjct: 1873 FIAQDTYRISVSEDSEKGSTLLQI 1896



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 13/179 (7%)

Query: 8    NLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGE 65
            NLD +  P P + +  V+AR +   A      + VNL D ND+APR      I  +  G 
Sbjct: 1524 NLDYESYPGPTR-KLVVVARTEGSPALYGYCQVIVNLLDQNDHAPRFTQQQYIANVLEGN 1582

Query: 66   ARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQ 121
             + + +V++ A D D G NA I Y I  V     + F I+P  S  ++T   L     E 
Sbjct: 1583 TKGEFVVQLSAKDGDRGANARILYHI--VDGNHDNAFIIEPAFSSSVKTNIVLDREIRET 1640

Query: 122  YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y +TV ATD G    +    + ++VV   N   P F      ++VSEG  + S + ++T
Sbjct: 1641 YKLTVIATDEGNPQMTGTATLRINVV-DINDNQPTFPPPNV-ISVSEGTEVGSVLTSVT 1697



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 11/155 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-QIVKIEATD 77
            ++  VIA ++     +   +L +N+ DINDN P  P  PP  I   E      V    T 
Sbjct: 1641 YKLTVIATDEGNPQMTGTATLRINVVDINDNQPTFP--PPNVISVSEGTEVGSVLTSVTA 1698

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            ND+     + Y+I    NT    F ID  SG I     L    +  Y + + A+D G   
Sbjct: 1699 NDVDTYPALKYAIVDGDNT----FSIDRYSGKIVLNRPLDYENKKVYEVNISASD-GEHV 1753

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            ++T + + +    N  +PVF   TY+  + EG+ I
Sbjct: 1754 ARTTLTIKIT-DINDNTPVFDDITYNRVLPEGSGI 1787



 Score = 42.7 bits (99), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 10/116 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
           LDR+  +  K +  +IA +      S   SL VN+ D NDN P          ++  +  
Sbjct: 459 LDRE--SIAKHKMTIIATDNGIPPLSTTASLIVNVVDANDNDPAFSQASYEFLVEENQKV 516

Query: 68  RQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
              V KI ATD D+G NA I YS++  SNT    F ++P +GVI  T K +   +Y
Sbjct: 517 GAFVGKISATDADIGDNAVIKYSLFP-SNT---SFVVNPSTGVI--TAKEVLDREY 566



 Score = 42.4 bits (98), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 17/166 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPI 59
           LVV+++ LDR+  +  ++R +V A +   T    S  V++ + + D+NDNAP      PI
Sbjct: 770 LVVARK-LDREIQD--EYRLEVRALDTSATNNPQSSAVAIRIEIVDVNDNAPEWHE-DPI 825

Query: 60  QIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            I   E       I    A D D G N E+ + I        + F +D  +G +     L
Sbjct: 826 NIDISEITNIGSTIYNFSAKDADSGSNGELNFYIISSQPVSNNVFNLDSLTGTLTLNSHL 885

Query: 117 IAG--EQYSITVQATDTGGKSSQTI-----VEVSVVPGPNTRSPVF 155
                ++Y + V+ATD     S+ +     V +SV+   N  +P F
Sbjct: 886 DFEILKEYWLVVEATDLATNVSERLVTSATVHISVLDA-NDNTPTF 930



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
           + A D D GVNA + Y++    +    +F I   SG +  +  L   A   Y   V A+D
Sbjct: 1   MSAIDPDCGVNAIVNYTL---GDFLARQFSIKADSGELCVSAPLDYEANSDYEFPVIASD 57

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG-ASINSTVATITVSRLASG 185
            GG S+  +V++ ++   N   P F    Y+V++ EG  S N  +  +T     SG
Sbjct: 58  RGGLSTTAMVKIQLL-DINDNVPAFTVKDYNVSLKEGRISSNEPIVAVTADDADSG 112


>gi|260832658|ref|XP_002611274.1| hypothetical protein BRAFLDRAFT_210978 [Branchiostoma floridae]
 gi|229296645|gb|EEN67284.1| hypothetical protein BRAFLDRAFT_210978 [Branchiostoma floridae]
          Length = 567

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 18/200 (9%)

Query: 1   YLVVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPP 58
           YLVV    LDR+  PN   ++ +VIA++      +V  ++ + + DINDNAP       P
Sbjct: 371 YLVVVARPLDREVVPN---YQIRVIAQDSGAPPLTVDRTINLQVTDINDNAPEFVGSYAP 427

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              +A      + ++ A D D+GVNAEIT+SI     T    F +DP SG+I TT  ++ 
Sbjct: 428 SLSEAAPIGTSVFQLTARDRDIGVNAEITFSILSTPGTRSDWFTVDPASGLI-TTRAIVD 486

Query: 119 GE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E      IT+ ATD G  +  T ++V+V +   N   P+F    Y+  V E   +   +
Sbjct: 487 REIDPSPRITIDATDHGTPAMSTTIQVTVTLLDFNDNEPIFNPTFYNATVLEDEDVGHCI 546

Query: 175 A--------TITVSRLASGC 186
                    T+TVS   S C
Sbjct: 547 VQVRLRHQITLTVSSFPSRC 566


>gi|348514466|ref|XP_003444761.1| PREDICTED: protocadherin-11 X-linked-like [Oreochromis niloticus]
          Length = 1232

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 16/189 (8%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIE 74
           ++  +++A ++     +    + + + D NDNAP  P  P IQ+   +  +   Q++KI 
Sbjct: 431 EYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQ-PEIQLSIPENNDPSTQLIKIS 489

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
           ATD D G NAEI   IY +S      F ID RSG++    +L     E+YS TV A D G
Sbjct: 490 ATDADSGHNAEI---IYTLSPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTVIARDNG 546

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------ 185
             S Q+ V V  +V   N  SP F    Y+  V E   +  TV  ITV+   +G      
Sbjct: 547 STSLQSNVTVKLIVQDLNDNSPTFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVT 606

Query: 186 CAIMNKEEN 194
            +I+N ++N
Sbjct: 607 LSILNGKDN 615



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 13/153 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+     ++ F VIAR+   T+    V++ + + D+NDN+P     P       E   
Sbjct: 528 LDRE--KQERYSFTVIARDNGSTSLQSNVTVKLIVQDLNDNSPTFTH-PEYNFYVPENLP 584

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               +  I  TD D G NA +T SI +    G   F IDP++GVI+        +Q  Y+
Sbjct: 585 LYGTVGLITVTDADAGDNAVVTLSILN----GKDNFIIDPQTGVIKPNITFDREQQSSYT 640

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             V+A D G   S +  +V++ V   N   PVF
Sbjct: 641 FMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVF 673



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 20/192 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           ++ ++NLDR+      F  ++   +      S    L V ++D+NDN P      L +  
Sbjct: 201 LIVQQNLDRE--QKDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFKDSELEVTV 258

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKL 116
           P     G +   + ++ ATD DLG NA+I ++    +S++    F I+  +G+I     L
Sbjct: 259 PENAPVGTS---VAQLHATDADLGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPL 315

Query: 117 I--AGEQYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGA 168
                  + + V A+D     S+  V V+V      VP  +TR  +   N   V +SE A
Sbjct: 316 DREVTPVHKLIVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINLVNGT-VLLSENA 374

Query: 169 SINSTVATITVS 180
            +N+ +A ITV+
Sbjct: 375 PLNTKIALITVT 386



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           V K N+  D      + F V A +     +S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 64  GEARRQ------IVKIEATDNDLGVNAEITY-------SIYHVSNTGLHKFRIDPRSGVI 110
              R        + ++ A DND G+NAE+ Y           VS  GL  F ID  +G I
Sbjct: 683 DLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSLISSIIITSRVSPRGL--FAIDKTTGNI 740

Query: 111 ETTGKLIAGEQ--YSITVQATDTGGKSS 136
               K++A +Q  + + V+  D G   S
Sbjct: 741 TLQEKIVAADQGLHRLVVKVKDLGQPES 768


>gi|345311026|ref|XP_001519720.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
            anatinus]
          Length = 2269

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 7/176 (3%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGE 65
            + LDR+ P+      +++AR+  G AA   VS  V L D ND+APR    I    + AG 
Sbjct: 1023 QELDRENPSERVVPVRLMARDGGGRAAFCTVS--VILTDTNDHAPRFRAAIYEADVDAGT 1080

Query: 66   AR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQY 122
             R + ++ + ATD D G NA++TY++   ++       IDPR G+I     L+   G+  
Sbjct: 1081 PRGKPVLTVLATDADEGSNADVTYALEADASRARELLAIDPRLGIISVRETLVGLDGQVL 1140

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S +VQA D G     T V V V V  P+ R P F +  Y   V E   + S + T+
Sbjct: 1141 SFSVQARDGGSPPLATAVPVRVRVLPPDVRPPHFAEPFYSFAVPEDLPLGSEIGTL 1196



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 36/191 (18%)

Query: 2   LVVSKENLDRDP---PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
           +VV      R+P   P PG  R  V+ R              V + D+NDNAP    +P 
Sbjct: 516 VVVEATEAGREPGAEPEPGAARAHVLVR--------------VAVEDVNDNAPTFLHLPY 561

Query: 58  ----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV--IE 111
                +  QAG   R +    A D D+G N  + YS+          FRI P   +  + 
Sbjct: 562 SASVSVDAQAGHPVRMVT---AVDRDVGRNGLVRYSL----RGHREHFRIGPAGEITLVR 614

Query: 112 TTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G    G ++ +TV A D G    S++ +V ++VV G    +P+F+Q+ Y   V E A 
Sbjct: 615 ELGPDALGREFRLTVVAEDGGDPALSAEAVVHIAVVGGA---APIFEQSFYRAEVPEDAP 671

Query: 170 INSTVATITVS 180
             S V  +  S
Sbjct: 672 PRSPVVHLRAS 682



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 19   FRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIE 74
            ++  V AR +Q G   +  V +++ + D+NDN+P +P   P      E R     +V++ 
Sbjct: 1247 YQITVRARGRQRGHEVTASVDVSIRVGDVNDNSP-MPEADPYAASVAENRPVGSPVVQVR 1305

Query: 75   ATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            A+D DLG N ++ Y++    +   L  F + P SG + T  +L   E+  + + V A+D 
Sbjct: 1306 ASDPDLGPNGQVQYALDPAQDRAVLEAFAVHPDSGWLTTLRELDREERATFRVLVVASDC 1365

Query: 132  GG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G    +SS   VEV+V    N   P F    Y   VSE       VA ++ S
Sbjct: 1366 GERERRSSTATVEVTVA-DENDNPPRFSAEVYKGTVSEADPSGGVVAVLSSS 1416



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLP 54
            + V  +  LDR+  +   +   V A +   TA +V   + V + D NDN+P         
Sbjct: 1449 WRVFVQRALDREEKD--SYLLNVTATDGTFTAGAV---VEVKVLDANDNSPVCDKTLYTE 1503

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      R I ++ ATD D+  NAEITY++   S  G   F + P +G ++T G
Sbjct: 1504 TIPEDSLPG----RLITQVSATDADIRTNAEITYTL---SGPGAENFNLHPETGELKTFG 1556

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   +Q  Y++ V ATD GG+S    V++  +   N  +PVF  + +   V E
Sbjct: 1557 PLDREQQATYNLLVTATDGGGRSCCASVQLW-LDDVNDNAPVFTADPFTATVFE 1609



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 8/182 (4%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            +V  + +LDR+         + + R   G   S   +L V++ DINDN P          
Sbjct: 1653 IVWLERSLDREVQAVHTLTVRAVDRGPAGQL-SATATLVVSVLDINDNPPEFEYREYGGA 1711

Query: 62   QAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             A +     +++++ A   D+  NAEITY+I   +  G  +F +D  +G +  +  L   
Sbjct: 1712 VAEDVPVGTEVLRVYAASRDVEANAEITYAIVGGNEHG--RFGVDAATGAVFVSASLDYE 1769

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                Y +TV+ATD G      +  V++ V   N  +PVF Q++Y   VSE A+ + ++ T
Sbjct: 1770 QARDYCLTVEATDGGSPPLSDVATVNINVTDINDHAPVFSQDSYTAVVSEDAAPDQSILT 1829

Query: 177  IT 178
            ++
Sbjct: 1830 VS 1831



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 9/160 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDN 78
            + ++     G   S   S+ + L+D+NDNAP     P      +  E R  + +I+ATD 
Sbjct: 1566 YNLLVTATDGGGRSCCASVQLWLDDVNDNAPVFTADPFTATVFENTEPRTPLTRIQATDA 1625

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I Y++   +++    F +D  SG++     L    Q  +++TV+A D G  G+
Sbjct: 1626 DTGLNGKIRYTLVPPADS---HFSVDADSGIVWLERSLDREVQAVHTLTVRAVDRGPAGQ 1682

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             S T   V  V   N   P F+   Y   V+E   + + V
Sbjct: 1683 LSATATLVVSVLDINDNPPEFEYREYGGAVAEDVPVGTEV 1722



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND+AP        + Q  E+     Q+++I A D D G NAE+ YSI    N
Sbjct: 15  MVVDVIDANDHAPWF-TSASYEGQVYESAAVGSQVLQITALDRDQGENAEVQYSI-ESGN 72

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
            G + F IDP  G + T  +L      +Y++ V+A D G    S++T   V +V   +  
Sbjct: 73  VG-NAFTIDPVLGSLRTARELDRRRHREYTLVVRAVDRGLPPLSAETTAHV-LVTLSDDD 130

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
           +P F    Y   VSE A   + VA +T S
Sbjct: 131 APRFSAGEYAGEVSEAAPAGTPVAEVTAS 159



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 15/125 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVK--- 72
           +  +V A    G AA   V   V L D ND+AP  P       +   AG     + +   
Sbjct: 200 YLLEVRATNMAGQAAQATVR--VRLRDENDHAPVFPRAGYTGLVSEAAGPGSLVLTEDGA 257

Query: 73  ---IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQ 127
              + A D D G NA ++Y I      G   F ID R+G + T   L       I  TVQ
Sbjct: 258 PLVVRAVDEDSGANAMLSYHIVEAPARGF--FTIDTRTGAVRTGASLDYEHAAVIRFTVQ 315

Query: 128 ATDTG 132
           A D G
Sbjct: 316 AQDAG 320



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 28/155 (18%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS- 89
           T A V V+L+      +D+APR          AGE   ++ +       +   AE+T S 
Sbjct: 118 TTAHVLVTLS------DDDAPRF--------SAGEYAGEVSEAAPAGTPV---AEVTASS 160

Query: 90  ----IYHVS--NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVE 141
                Y +S  N G   F ++P SGVI T   L    Q  Y + V+AT+  G+++Q  V 
Sbjct: 161 RSAVFYELSSGNEG-DAFSVNPHSGVITTRRGLDFEVQASYLLEVRATNMAGQAAQATVR 219

Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           V +    N  +PVF +  Y   VSE A   S V T
Sbjct: 220 VRLR-DENDHAPVFPRAGYTGLVSEAAGPGSLVLT 253



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)

Query: 34  SVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           S  V +TV ++++ND+ P    P+              + ++ A D D      + Y+I 
Sbjct: 844 SAEVLVTVTVSNLNDHLPLFDQPLYEATVGGLAAPGHLVTRVAAIDAD--GPGLLEYAI- 900

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPN 149
            V+      F +D  SGVI   G+L +     Y + V  +D G   S+T V V+V  G N
Sbjct: 901 -VAGDRGRLFSMDTTSGVITLAGRLPSPPPPTYELNVSVSD-GVFRSETRVRVAVT-GAN 957

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVAT 176
             +P F Q+  +  ++E A   + VAT
Sbjct: 958 QHAPTFAQSELEAELAESAPAGTLVAT 984



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 20/118 (16%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS------ 123
            +   EATD D+G    + YSI  V+     +FR+D R       G+L   ++        
Sbjct: 982  VATAEATDKDVGPYGLLAYSI--VNAFAAARFRVDAR-------GRLFTIQELDRENPSE 1032

Query: 124  ----ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                + + A D GG+++   V V ++   N  +P F+   Y+ +V  G      V T+
Sbjct: 1033 RVVPVRLMARDGGGRAAFCTVSV-ILTDTNDHAPRFRAAIYEADVDAGTPRGKPVLTV 1089


>gi|358341314|dbj|GAA35092.2| protocadherin gamma-A3 [Clonorchis sinensis]
          Length = 1249

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 23/196 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV-PVSLTVNLNDINDNAPRLP----- 54
           Y +  +++LDR+      F    I    QGT + V  +  T+NL DINDN P        
Sbjct: 637 YKITVEKSLDRESSKSLHF---TIHCWDQGTPSLVTDMPSTLNLIDINDNLPLFRKNVYS 693

Query: 55  -MI----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSG 108
            M+     P++++    R +I+K+EATD D G NA + YS+ H + T  L   +ID  SG
Sbjct: 694 VMVTEDSDPLRLKN---RFEIIKVEATDRDEGRNARLRYSLDHGTPTSILGLVKIDAESG 750

Query: 109 VIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           V+ +TG L     + +S+TV ATD G   +S+ T+V + ++   N   P F ++ Y  ++
Sbjct: 751 VLSSTGSLDRELLDAFSVTVIATDLGDPPRSAHTVVNIRIL-DYNDNPPTFLKSAYSFSI 809

Query: 165 SEGASINSTVATITVS 180
            E   +   + T+TV+
Sbjct: 810 KENCPVGELIGTLTVT 825


>gi|291222991|ref|XP_002731484.1| PREDICTED: protocadherin-15-CD1-like [Saccoglossus kowalevskii]
          Length = 1577

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 94/192 (48%), Gaps = 15/192 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRLPMIPP 58
           Y+VVS E LDR+      F F V+A E        S PV++TV L D NDN P       
Sbjct: 441 YVVVSGE-LDREMNT--SFFFWVVAMETTTEETMESDPVAITVTLLDENDNYPIFAGGNN 497

Query: 59  IQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-- 113
            ++   E       I+ + A+D DLG N  I +SI H++N     F I+  +     T  
Sbjct: 498 YRVMVKEDAIVGSVILSLTASDEDLGDNGIIDFSITHIANGASDLFNINQTNATAVITLA 557

Query: 114 -GKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             +L A ++Y+ITV A D G     KS+   V V V+P  N R PVF +N +  +VSE A
Sbjct: 558 KSELEARKEYTITVMAKDRGPENNQKSTLAFVTVDVIPSLNARKPVFTENPFHASVSESA 617

Query: 169 SINSTVATITVS 180
              +   T+T +
Sbjct: 618 LPGNVFETVTAT 629



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 12/139 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDL--GVNAEITYSI 90
           +V   L V + DINDN P      P      E +  IV +++A D D    VN+++ Y++
Sbjct: 684 TVTTELIVTVLDINDNNPIFNSTWPSVFSILEGQIGIVGQVQAYDLDEPNTVNSQVEYTL 743

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-SSQTIVEVSVVPG 147
                    KF I P+ GVI T   L   +Q  Y + V A D      S T     +V  
Sbjct: 744 TS------DKFNISPQEGVISTIVALDREQQSVYELVVTAQDQADSPRSSTATFTVIVLD 797

Query: 148 PNTRSPVFQQNTYDVNVSE 166
            N   PVF    Y+  V E
Sbjct: 798 ENDHGPVFANTYYEYTVPE 816


>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
 gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
          Length = 4187

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 12/184 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIP 57
            L+ +   LDR+  +  +++  V A +      S  V+ TV + D NDN P       ++ 
Sbjct: 1159 LITTLRPLDREFKS--EYKLTVSASDGGTPPVSTDVTFTVKITDENDNQPEFKEKQYVVG 1216

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
                QA      + ++ ATD D+G NA++ YSI        +KF ID RSG I T   L+
Sbjct: 1217 VFARQATSKSFGLYQVVATDEDIGSNADLRYSI--TKGNRDNKFIIDSRSGEIFTNVSLV 1274

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPG--PNTRSPVFQQNTYDVNVSEGASINST 173
             GE Y +T+ A D G    S+ T V + V+ G  P+  +PVF    Y  ++ E   INS 
Sbjct: 1275 DGESYDLTIVAEDNGLPKLSTSTNVLIDVIQGNKPSKNAPVFWNKQYSADIQEDKRINSF 1334

Query: 174  VATI 177
            V  I
Sbjct: 1335 VLII 1338



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 11/150 (7%)

Query: 39   LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            + V + DIND  P+    P     P  I  G    +++++ A D D G N  +TY++   
Sbjct: 2742 VVVQVLDINDVTPKFVSDPYLASIPENIDIGS---KVLRVFAEDLDSGSNGMVTYALVSK 2798

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV-SVVPGPNT 150
                  KF ID  +G I T G L   +Q  +   V+ATD G     ++  V ++V   N 
Sbjct: 2799 DKLVKEKFDIDQHTGWITTRGALDREKQPSFEFQVRATDNGTTRLTSLTTVRAIVLDVND 2858

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P F Q+ +  +V E A I  +V TIT +
Sbjct: 2859 TPPKFSQSEFMASVKEDALIGQSVTTITAT 2888



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 11/172 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEAT 76
            + F V A +  G A    +S  ++L+D+NDN P             +A  ++ +++++A 
Sbjct: 3032 YNFMVSAADIGGQACYSNIS--IHLDDVNDNRPLFSQSSYFTAVYEDAPLKKVLLQVKAD 3089

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
            D D+GVN ++TYS+  V++ G   F I+  +G+I     L     E Y++ V+  D G  
Sbjct: 3090 DADVGVNRKLTYSL--VTDAG-GTFTIETGTGIISLEKPLNRELKENYTLNVEVMDGGTP 3146

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI-NSTVATITVSRLAS 184
               +I  V + V   N   P F  + Y  NVSE A I N  V    VSR +S
Sbjct: 3147 PLSSIATVQIKVLNINDVPPEFSHSIYHGNVSEDAPIGNEVVRVRAVSRESS 3198



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 47   NDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND+ P    P+       + +A   I+++ ATD D G N+++ YSI  VS        +D
Sbjct: 1515 NDHKPEFLSPLFESEVDVSAKAGTAILRVIATDKDDGTNSKLKYSI--VSGNTNKSLSVD 1572

Query: 105  PRSGVIETTGKL-IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
              SGV++  G+L     QY++ VQ+TD G    +T V+V V      ++  F++  Y+V+
Sbjct: 1573 QNSGVVKVAGRLSTLVHQYALKVQSTDGGEPPLKTQVDVKVKVRGIVKNFAFEKPKYEVS 1632

Query: 164  VSEGASINSTVATI 177
            + E +  +  +AT+
Sbjct: 1633 LPENSPPDQAIATV 1646



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 11/117 (9%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YS 123
            +  + ATD D G  A +TYSI  V    + KFRID  SG++ +  +L+   +       S
Sbjct: 2463 VTMVSATDLDSGNYAHLTYSIDSVD--AMRKFRIDADSGMLYS--RLMFDRENSSQAIMS 2518

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + ++ATD GG+    +VEV ++   N   P+F+   YD  +S   ++ + V   + S
Sbjct: 2519 VPIRATDGGGRFGFCVVEVHLI-DENDNQPIFELKNYDTTISRSVTMGTPVLMTSAS 2574



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 17/157 (10%)

Query: 39  LTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           L V + D+ND +P        +  P  I  G+    +  + A+D D G N  ITY I  V
Sbjct: 777 LNVKITDVNDCSPVFDKTVYEVTLPENITVGQT---VTHVHASDKDQGTNGFITYQI--V 831

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGP 148
           ++ G  KFR++  SGV+     L   EQ  Y I +QA D+     K   T V V+++   
Sbjct: 832 NDFG-GKFRVNRISGVVSVGDYLDYEEQEMYKIEIQAMDSSVDNQKVGSTHVIVTLL-DI 889

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           N  SP+ +   ++V V E   +N+ V +I  S   SG
Sbjct: 890 NDNSPIVKPKKFNVTVQEDLLVNAVVTSIHASDPDSG 926



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 24/191 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR---------LPMIPPI 59
           LDR+   P  +   + A +K     +    L VN+ D NDN P          L  + PI
Sbjct: 276 LDRELA-PFGYNVTLTAYDKGTPVRNGSYVLRVNVLDENDNNPEFNQSRYITNLSELAPI 334

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
                     ++++ ATD D G N  I Y I   +  G  KF I+ ++G I T G L   
Sbjct: 335 HTP-------VLRVLATDKDAGSNGNIMYVITRGNELG--KFEINSKTGQIYTKGDLDYE 385

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPG---PNTRSPVFQQNTYDVNVSEGASINSTV 174
           + +++ +TV A D     S+ I  V VV      N   P F+   Y  ++ E  +  ++V
Sbjct: 386 SRQRFDLTVAALDGVPLQSRKISTVPVVVNILDANDHDPEFKAPEYRKDLYEDLTPGTSV 445

Query: 175 ATITVSRLASG 185
            T++   L SG
Sbjct: 446 FTVSAEDLDSG 456



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 28/181 (15%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+  + G +   + A +   T+ +    + +++ D NDN       PPI  Q+    
Sbjct: 2923 SLDRE--SVGSYDLNISASDGLFTSFA---QMKIDIEDANDN-------PPICTQSIYVE 2970

Query: 68   R---------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                       ++ + ATD D+GVNAE+TYS++     G   F +D ++G +    +L  
Sbjct: 2971 HIKENTPLGSTVLTVGATDADVGVNAELTYSVF---GQGFGTFAVD-KNGKMTNLVELDR 3026

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              +  Y+  V A D GG++  + + +  +   N   P+F Q++Y   V E A +   +  
Sbjct: 3027 ETRPFYNFMVSAADIGGQACYSNISIH-LDDVNDNRPLFSQSSYFTAVYEDAPLKKVLLQ 3085

Query: 177  I 177
            +
Sbjct: 3086 V 3086



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 12/125 (9%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++  +ATD D   +  + Y+I  +  TG+ KF IDP +G I T G+L     + Y +TVQ
Sbjct: 1021 VISPKATDQD---SWYLKYAI--IDGTGVDKFIIDPDTGAIRTAGELDHEVADHYWLTVQ 1075

Query: 128  ATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            A D  G+S      + V   +   N  +P F  +TY   ++E     S+V  +T     S
Sbjct: 1076 AKD--GESYPLYTNIPVLINIVDLNDEAPYFAPSTYYPVLAENLPSGSSVVQVTAKDPDS 1133

Query: 185  GCAIM 189
            G +++
Sbjct: 1134 GGSLL 1138



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 25/192 (13%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVP-----VSLTVNLNDINDNAPRLPMIPP-IQI 61
            +LDR+  +     +QVI    Q    SVP      ++ V + D NDN P     P  I +
Sbjct: 1992 DLDRESIDA----YQVIV---QARDDSVPPNVAQAAVHVQVIDRNDNQPVFINSPYFIVL 2044

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLI 117
            Q G A+  I+ + +ATD D+G NA + Y +    + G   F I  ++G   V  T   + 
Sbjct: 2045 QLGVAQGTIIGQAQATDADIGSNANLRYDLIG-GDPGY--FSISRKTGEVVVRRTLDDVK 2101

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                +++ V+ATD G   ++ +V++ VV   +  +PVF Q ++   ++E   I S V ++
Sbjct: 2102 VPRLFTLMVEATD-GLFRTEAVVKIKVV---DKETPVFDQLSFSKVLAEDTPIGSEVTSV 2157

Query: 178  TVSRLASGCAIM 189
            T +R  +G  I+
Sbjct: 2158 T-ARSPNGAGIL 2168



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 26/166 (15%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVK 72
           +   V+ ++K+         + + ++D NDN P       L  IP    +       I +
Sbjct: 71  YELNVVVQDKRTKRTLDRTKVNITVDDSNDNRPIFLKKKYLKTIP----EDIPMHTSIAR 126

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-AGEQYSITVQATDT 131
           IEA D D+G N  I YS    + +    F I+P SGV+    KL  +   + +TV A D 
Sbjct: 127 IEAVDADVGPNGLIYYSFKEKTTS----FAINPISGVVSVAQKLSNSARIHRLTVVARDR 182

Query: 132 G--------GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
                     ++ Q IV V  V   N  SP F   T   NVSEG S
Sbjct: 183 ALPPSKPKSSRNCQLIVNVQAV---NQFSPEFSVKTQLQNVSEGTS 225



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 17/185 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
             +    +LDR+  +   +  +V A +   TA SVPV  T+N+ D+NDN+P+ P     + 
Sbjct: 1369 FITVAHSLDREEKS--FYSLRVEATDGYNTA-SVPV--TINILDVNDNSPQ-PARREYRA 1422

Query: 62   QAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI-- 117
               E +    +     D D GVN E+ Y I   +       F+I+  SG I T   L   
Sbjct: 1423 HVAENSDVGTLVTTVKDPDAGVNGEVEYCIVQTAKAESASLFKIESHSGRILTVKPLDYE 1482

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVP------GPNTRSPVFQQNTYDVNVSEGASIN 171
              +++ +T++A+D G    +T+  V V         P   SP+F+    DV+   G +I 
Sbjct: 1483 TMQEHVLTIKASDRGIPKRETLFSVVVSVDDVNDHKPEFLSPLFESEV-DVSAKAGTAIL 1541

Query: 172  STVAT 176
              +AT
Sbjct: 1542 RVIAT 1546



 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            +V ++A D D G+N EI Y I +VS  G   F+ID +SGV+     L    +  + + + 
Sbjct: 2255 VVTVKAIDGDSGINKEINYFIQNVSRVGAF-FKIDKKSGVVFVAKSLDYESRVVHEMIIV 2313

Query: 128  ATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            A D G  S   +T V V V+   N  +P F ++ Y  ++   AS
Sbjct: 2314 AADEGKPSLTGETRVRV-VLMDANDNAPRFDKSMYAASILGSAS 2356



 Score = 42.4 bits (98), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            ++++ ATD D G NA+I YSI   ++    KF+I   +GVI+ +G +   E   Y + V+
Sbjct: 3291 VLQVFATDRDSGTNAQIKYSIAEGNDA--KKFKIVEETGVIKVSGDIDREEVASYRLKVR 3348

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            A D G   + + T+V++ V    N  SP F        +SE +  N+ V
Sbjct: 3349 AQDQGLPPQVADTVVDIEVT-DVNDNSPEFSSTNLTTVLSESSLPNAAV 3396



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 31/163 (19%)

Query: 33  ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK----------IEATDNDLGV 82
           ++VPV   VN+ D ND+ P        + +A E R+ + +          + A D D G 
Sbjct: 408 STVPV--VVNILDANDHDP--------EFKAPEYRKDLYEDLTPGTSVFTVSAEDLDSGG 457

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG----EQYSITVQATDTGG---KS 135
           N ++ YS+   +N     F I+P +G+I TT  L       E  ++ V+A+D G    + 
Sbjct: 458 NGKVRYSL---ANLRPVPFEIEPDTGIIRTTTNLDRDTGLPEFINLQVRASDFGTPLRRE 514

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           ++T+V++  V   N  +PV +Q   ++ V   A +   + T+T
Sbjct: 515 TETLVKMR-VKEMNDNAPVLKQFKCNILVDRNAPVGVLITTVT 556



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)

Query: 41  VNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGL 98
           V L DINDN+P + P    + +Q       +V  I A+D D G   EI +S+   +    
Sbjct: 884 VTLLDINDNSPIVKPKKFNVTVQEDLLVNAVVTSIHASDPDSGPGGEIEFSLPEST---- 939

Query: 99  HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            KF ID +SGVI    +L   ++  Y++TV+ TD G
Sbjct: 940 RKFNIDSKSGVIRLRQRLDFEQKSTYNLTVRVTDKG 975



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
             + ++  LDR+   P  F FQV A +   T  +   ++   + D+ND  P+      +  
Sbjct: 2814 WITTRGALDREK-QP-SFEFQVRATDNGTTRLTSLTTVRAIVLDVNDTPPKFSQSEFMAS 2871

Query: 62   QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               +A   + +  I ATD DL  N E+ Y I  +S     +F I+ ++GVI   G L   
Sbjct: 2872 VKEDALIGQSVTTITATDEDL--NTELYYFI--LSGDPQARFGIERKTGVIFVHGSLDRE 2927

Query: 120  E--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                Y + + A+D G  +S   +++  +   N   P+  Q+ Y  ++ E   + STV T+
Sbjct: 2928 SVGSYDLNISASD-GLFTSFAQMKID-IEDANDNPPICTQSIYVEHIKENTPLGSTVLTV 2985



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           + +  ATD D G N  + YSI  V       F I+  +G +     L       Y++ + 
Sbjct: 705 VSQFMATDEDKGYNGLVLYSI--VEGDVDSVFNINMFTGELTVAMPLDRETISSYTLNIS 762

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   KS+ TI+ V +    N  SPVF +  Y+V + E  ++  TV  +  S
Sbjct: 763 AVDCGKHRKSAYTILNVKIT-DVNDCSPVFDKTVYEVTLPENITVGQTVTHVHAS 816


>gi|405962038|gb|EKC27752.1| Protocadherin Fat 4 [Crassostrea gigas]
          Length = 10119

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 91/188 (48%), Gaps = 18/188 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
           +VS  +LD +     +F F V+ RE       S   ++TVN+ + NDN P  P       
Sbjct: 462 LVSAGSLDFE--TDSQFTFTVVVREANTVERRSATATMTVNVINANDNVPVFPAAAYQST 519

Query: 61  IQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVSNT------GLHKFRIDPRSGVI 110
           I AG         +  ++ATD D G+  +++YSI  VSN+       + KFRI    GV+
Sbjct: 520 ISAGGYTPSNGVTVATVQATDADTGIFGQVSYSITAVSNSKNANDNAISKFRISGSLGVV 579

Query: 111 ETTGKLIAGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           E  G +   EQY+ITV+A D G    Q    T++ V V      + P F   TY++ VSE
Sbjct: 580 ECIGSVSGDEQYTITVRAADGGTGLDQRFATTVIVVDVTGTAVNQGPSFTAGTYNILVSE 639

Query: 167 GASINSTV 174
           G    S+V
Sbjct: 640 GIPTGSSV 647



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 7/115 (6%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYS 123
            R ++ + ATD D   N  ITYSI   + ++  L  F I+P +G I     L     +Q++
Sbjct: 7183 RGVISVRATDRD---NDAITYSIIGDNQNSISLSYFFIEPANGTIYLRQSLENNNIDQFT 7239

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             TV+ATD G  S  T  +V V    N  +PVF Q  Y  +V E  +  S + T+T
Sbjct: 7240 FTVRATDNGRPSRSTTAQVVVFVTRNQFNPVFVQTPYVTSVQENTNNGSLIYTVT 7294



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
            L V+K  L  D   P ++   + A +      S  V++TVN+   N N P       +  
Sbjct: 9235 LYVTKR-LSEDTQRPSRYVLSITAFDNGIPQLSSRVTVTVNVIR-NRNGPVFSGNSYVTT 9292

Query: 59   IQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            I   I  G +   I++++ATD D     ++ YSI       L+ FRID  +GVI  +  L
Sbjct: 9293 IDESISVGTS---ILQVQATDAD---GDQVRYSIISGIPGSLY-FRIDEVTGVIGVSSAL 9345

Query: 117  I--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 EQ+++TVQA D  G+   S    ++V++    N  +PVF Q+ Y++ +SE   ++
Sbjct: 9346 TQTGQEQFAMTVQARDVPGQIASSRFATIQVTINVRRNPNAPVFLQSLYNLTISEYVGVH 9405

Query: 172  STVATITVS 180
              V T++ +
Sbjct: 9406 DLVVTVSAT 9414



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 19/189 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
            L V+K  L  D   P ++   + A +      S  V++TVN+   N N P       +  
Sbjct: 8381 LYVTKR-LSEDTQRPSRYVLSITAFDNGIPQLSSRVTVTVNVIR-NRNGPVFSGNSYVTT 8438

Query: 59   IQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            I   I  G +   I++++ATD D     ++ YSI       L+ FRID  +GVI  +  L
Sbjct: 8439 IDESISVGTS---ILQVQATDAD---GDQVRYSIISGIPGSLY-FRIDEVTGVIGVSSAL 8491

Query: 117  I--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 EQ+++TVQA D  G+   S    ++V++    N  +PVF Q+ Y++ +SE   + 
Sbjct: 8492 TQTGQEQFAMTVQARDVPGQIASSRFATIQVTINVRRNPNAPVFLQSLYNLTISEYVGVQ 8551

Query: 172  STVATITVS 180
              V T++ +
Sbjct: 8552 DLVVTVSAT 8560



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 18/192 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            + SK +LD +      ++F V   + Q T   S   ++ V + D ND  P++ + P   I
Sbjct: 902  IFSKNSLDFETKQ--FYQFLVTTTDGQNTGITSATATIQVTVLDRNDFRPQITVSPSSSI 959

Query: 62   QAGEA---RRQIVKIEATDNDL--GVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGK 115
               E      +I   +ATDND     N+ + ++I  V+ +TG   F I+P +GV+     
Sbjct: 960  NVPETATINTEIANFDATDNDTPNTDNSRVDFAIAGVNPSTGNGLFYINPFNGVLYLQNL 1019

Query: 116  LIAG----EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN-TYDVNVSEGA 168
                      Y +TV ATD G   +S    + +++V   NT+SPVF  +  Y   + +  
Sbjct: 1020 FTTDVNRPSSYQVTVTATDRGTPQQSDSATITINIV--RNTQSPVFTNSGQYATTIDQNL 1077

Query: 169  SINSTVATITVS 180
            +I ++V T+T +
Sbjct: 1078 NIGTSVFTVTAT 1089



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 28/196 (14%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLND---INDNAPRLPMIPP 58
            +V    NL +D     + R        Q   A   VS+ +  N+   I  N P    +P 
Sbjct: 6898 MVFVAVNLRQDSTQFYQLRVTAFDTAVQSQIAEALVSINMIRNENPPIFVNEPYTTTVPE 6957

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS-------NTGLHK-FRIDPRSGVI 110
              I  G +   I KI ATD D   N  + YSI  VS       NT L   F I+P SG+I
Sbjct: 6958 -SISLGSS---IYKISATDAD---NDVLRYSIVGVSYANQQVFNTTLSDYFYINPDSGII 7010

Query: 111  ETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS---PVFQQNTYDV 162
              T  L+     +  Q  ITV+ TD   + +Q  ++ S V     R    PVFQ   Y V
Sbjct: 7011 YLTRSLVNFGFSSLNQIQITVRVTDQ--RVTQERIDTSTVVVNVQRDQFPPVFQNTPYGV 7068

Query: 163  NVSEGASINSTVATIT 178
            ++++  ++NST+ T++
Sbjct: 7069 SITDSQALNSTIYTVS 7084



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 15/171 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI----QAGEARRQIVKI 73
            +F F  IAR++     S    + +++  + D +P + +  P  +    +       I  +
Sbjct: 5485 QFDFNTIARDQSNPERSATAYVVIDV--LRDTSPPVFIQEPYVVTNLPETSAVGTSIYTV 5542

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDT 131
             A DNDL    +I YS+     T  + F ++ RSG++     LI    + Y + V A D+
Sbjct: 5543 TARDNDL--KGQIVYSVIGDLQTPFY-FDVNSRSGIVTIKNSLIQDNAQTYILRVTAYDS 5599

Query: 132  GGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               S  + + V ++V+  P+   P+F    Y+V + E  S+ STV  +T +
Sbjct: 5600 LSTSRVATSTVSINVIKNPS--GPIFTLPAYEVTIPETQSLGSTVVNVTAT 5648



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG---EQYSIT 125
            Q++ + A D D   N  ITY + + ++ G   F +D  +G I T  + + G     Y++T
Sbjct: 6468 QVITVLAVDQD--ANDIITYQLVNSTSNGTEYFYLDRDTGAI-TLRRSLEGTFINAYTLT 6524

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+ATD   +S+   V + +    N + PVF    Y+  +     INSTV T+T
Sbjct: 6525 VRATDNRIRSALATVRIFITRQIN-QPPVFVNTPYETTIESSRQINSTVYTVT 6576



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 35   VPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYH 92
            VPV ++V  N+   N PR    P     + +A     + ++ A DND      ITY++  
Sbjct: 1480 VPVFISVFRNN---NPPRFVNTPYSTTISRDASPNSNVYQVSAVDNDNQF-GSITYALEG 1535

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V ++  + F ID  +G I  T  L +     Y +  QA D G  +      V++    N 
Sbjct: 1536 V-DSASNFFTIDSSTGQIRLTSSLSSDINTVYRLLAQAYDNGYPALYDTTVVTINVNRNL 1594

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + P+F Q TY++ + E  ++  T+ T+  S
Sbjct: 1595 QPPIFNQQTYNITILESQTLGETITTVVAS 1624



 Score = 42.4 bits (98), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 10/172 (5%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
            + +L  DP     F  +V AR+  GT   +SVP+ +T+ +  + +N P + +  P   Q 
Sbjct: 4009 RRSLLYDPCRAQVFNMRVTARDL-GTPQLSSVPIEVTIFV--VRNNNPPVFVNLPYTTQI 4065

Query: 64   GEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIA 118
             E     R + ++  TD D+ V   +        ++    F ID   G   ++++     
Sbjct: 4066 EETSNIGRSVYRVTTTDADVQVPFNVVRYRIIGDDSATTFFDIDQNFGNVTLKSSVNFDT 4125

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
               Y I VQA D G  S      + V+   N  SPVF    Y+V ++E A++
Sbjct: 4126 TSNYKIRVQAYDGGLPSLSATATIDVLVQRNLYSPVFSVLNYEVTINENAAL 4177



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ- 60
            L+  ++ L +D  N   +  +V A +  G  A   V +++N N     +P       +Q 
Sbjct: 1122 LITVRDTLTKD--NSATYTLRVRATDGGGLTADATVFISINRNIF---SPEWLQTSYVQS 1176

Query: 61   IQAGEARRQ-IVKIEATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLI 117
            I    A  Q IV ++A D D L     ++YSI   S   L  F++     V +  +    
Sbjct: 1177 IAENFALGQTIVNLQARDQDALSPYNLLSYSIVGDSQ-ALQYFQVSSSGAVSLRQSPTQT 1235

Query: 118  AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +  Q++I +  +D G      S+Q +V V+++   N ++P+F  + Y V + E ASI ++
Sbjct: 1236 SQSQFTIRISLSDQGQPPRSASNQAVVNVTIIR--NQQAPIFFSSEYRVTIQETASIGTS 1293

Query: 174  VATITVS 180
            V T++ S
Sbjct: 1294 VQTVSAS 1300



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 14/175 (8%)

Query: 2   LVVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           L+ ++  LDR+  PN   +   + ARE   T+ S   +L++++ DINDN P+     +  
Sbjct: 685 LLTTRNVLDRESRPN---YVLILFARET-STSRSATATLSISITDINDNNPQFLNNQLFT 740

Query: 59  IQIQAGEARRQIV-KIEATDNDL-GV-NAEITYSIYHV-SNTGLHKFRIDPRSGVIETTG 114
             +Q G+  +  V  + A DND  G  N+ I+YSI  +  NT  ++F I+  +G I T  
Sbjct: 741 FSVQEGQNSQVAVGTVTAVDNDAPGTPNSAISYSIQPLPPNTFQNQFSINSNTGAITTVQ 800

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            L    Q  +   V A D    S      V+V V       P+F +  Y V+V E
Sbjct: 801 PLDYETQRVHYFLVLARDNAVDSRTGTATVTVNVQDVQDSVPIFTETNYAVSVPE 855



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 11/114 (9%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLIAGEQ----Y 122
            I  + ATD D G N  ITY +    +   +    F ++P SGV+  T +L    Q    Y
Sbjct: 8338 IADLNATDPDSGENGRITYVLRGSDSVPSYSDVYFYVNPTSGVLYVTKRLSEDTQRPSRY 8397

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +++ A D G    SS+  V V+V+   N   PVF  N+Y   + E  S+ +++
Sbjct: 8398 VLSITAFDNGIPQLSSRVTVTVNVIRNRN--GPVFSGNSYVTTIDESISVGTSI 8449



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 12/168 (7%)

Query: 19   FRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEA 75
            F +   AR+    Q  +AS+PV++ V  N         P    I    G     I+ + A
Sbjct: 2543 FTYNAFARDNGVPQLESASIPVTINVRRNQFPPTFQNEPYSRAITSSVGSGT-SIITVTA 2601

Query: 76   TDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG 132
            TD D       +TYSI    +     F I+P +G I  +  +       Y + V A+D G
Sbjct: 2602 TDADNFSPFNVVTYSIIG-DDQAPSLFNINPSTGFITMSSNINNDGTSFYQVRVLASDGG 2660

Query: 133  GKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              S    T+V V+V    N  SPVFQ + Y++ + E   +  T+ T+T
Sbjct: 2661 FPSLTDTTVVYVNVTR--NLFSPVFQPDNYNIAIPESEPLGETIITVT 2706



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 22/190 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIA----REKQGTAASVPVSLTVNLNDINDNAPRLPMI 56
            YL  S EN + D     +F F V A    R  + T A V V +T   N  N    + P +
Sbjct: 7225 YLRQSLENNNID-----QFTFTVRATDNGRPSRSTTAQVVVFVT--RNQFNPVFVQTPYV 7277

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT--GLHKFRIDPRSGVIETTG 114
              +Q         I  + A D DL     I   +Y V+ T      FR+D + G + T G
Sbjct: 7278 TSVQENTNNGSL-IYTVTAVDQDL--QGRI---VYRVTGTLSAPSFFRLD-QDGRVYTNG 7330

Query: 115  KLIA--GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L       Y + VQA D+   +  T  ++++    N   PVF Q+TY   +SE ASI S
Sbjct: 7331 NLRTDVSLTYVLRVQAYDSSVPTQTTTADLTINVLRNINPPVFSQDTYSTRISEAASIGS 7390

Query: 173  TVATITVSRL 182
             +   T + L
Sbjct: 7391 RLIDTTATDL 7400



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQ 156
            F ID  +G+I  T  L +  Q  Y++ V+A D G    SS T+V V+V    N  +PVF+
Sbjct: 2414 FNIDRNTGLIRLTQSLFSESQTLYNVRVRAMDGGNPRLSSTTVVAVTV--RRNLAAPVFR 2471

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q  YD  + E  +  S V TI
Sbjct: 2472 QARYDTTIPETQTPGSLVLTI 2492



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)

Query: 56   IPPIQIQAGEARR---------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR 106
             PP+ I A   +R          ++ + ATD DL     I   +Y V   G   F +DP 
Sbjct: 6137 FPPVFINAPYFQRIEEDRAVGSNVLTVTATDQDL-----IGAIVYKVVLPGSPFFIVDPA 6191

Query: 107  SGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            SGV+   ++ KL +  QY   V A D+   + +T  +V+V    N   P F    Y+  +
Sbjct: 6192 SGVVSLASSVKLDSNLQYRFQVAAYDSQDPTRRTTSQVTVEVTRNPSGPSFLSGQYETTI 6251

Query: 165  SE 166
            +E
Sbjct: 6252 AE 6253



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAG 119
            +A     +++   ATD D   N  +TYS+ +     +  F ID  +G I        I+ 
Sbjct: 7384 EAASIGSRLIDTTATDLD---NDRLTYSLRNNEQRCVDMFFIDTANGDIFLKKSFLDISD 7440

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVP-GPNTRSPVFQQNT-YDVNVSEGASINSTVATI 177
              +S TVQ TD G  + Q+    +++    +   PVF  N  Y V + E  +I S++  +
Sbjct: 7441 VTFSCTVQVTDNGYPNPQSDTATAIITIDRDLNVPVFTSNARYAVTIDETTNIGSSILNV 7500

Query: 178  TVSRL 182
              SRL
Sbjct: 7501 QASRL 7505



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            + D  P   +  P Q    E     RQ   + A DNDL     I Y +     T    FR
Sbjct: 5920 VRDQGPPFFINQPYQTTINELDAVGRQTYVVTARDNDLV--GAIRYEMIGDYPTQ-SFFR 5976

Query: 103  IDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            IDP +G I  T  L    I  +QY   + A DT   S+  +  V++    N  +P F+  
Sbjct: 5977 IDPFTGNITNTVSLKSDNIRSQQYVARIIAFDTARPSASAVATVNIFVIRNPNAPQFRLP 6036

Query: 159  TYDVNVSEGASINSTVATITVS 180
            +Y   ++E  +I   +  +T +
Sbjct: 6037 SYSTTINENQAIGQFIINVTAT 6058


>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
          Length = 4001

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 101/181 (55%), Gaps = 13/181 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + ++ KE+LDR+  +  +F  +V A + +  AA   V++ +++ D+NDN+P    +   +
Sbjct: 3093 WGLIVKESLDRETKD--RFTLRVTATDGKFEAA---VTVEIHVLDLNDNSPTCEQLLYTE 3147

Query: 61   --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
              ++    RR ++K+ A+D D+G N EI+Y+++        KF +D R+G + T   L  
Sbjct: 3148 TVMENSSPRRFLLKVSASDPDVGANGEISYTLH---GPDADKFHLDHRTGELLTLAVLDR 3204

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             +  ++++  +ATD GG+S Q  +++ +V   N   P+F  + Y V V +  ++ + VA 
Sbjct: 3205 ESDGEFNLVAKATDGGGRSCQADIQL-MVQDMNDNQPLFSASHYMVTVFDNTTVRTPVAV 3263

Query: 177  I 177
            I
Sbjct: 3264 I 3264



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 15/188 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQI 61
            V+    LDR+         Q   + K G      +SL + L DINDN PR   +PP  +I
Sbjct: 1002 VIVTGQLDREAVASHNLWIQARDQAKHGPQLFSTISLLIILQDINDNPPRF--VPPGYRI 1059

Query: 62   QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            +  E       ++ +E+ D DLG    ++Y++   + +G+  F I+P +G +    +L  
Sbjct: 1060 KVAEDVPVGTILLWVESIDLDLGRAGLVSYNL-KSTESGI--FNIEPSTGALTLERELDF 1116

Query: 119  GEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINS 172
              +  Y++TV+A D G     SS   VE+ V+    N   P F +  Y+  V E A++ S
Sbjct: 1117 ERRPMYNLTVRAVDHGLPRSLSSSCFVEIQVLDVNENLYRPTFSEFVYEAAVIEDAAVGS 1176

Query: 173  TVATITVS 180
            +V T+T S
Sbjct: 1177 SVVTLTAS 1184



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 11/166 (6%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPR----LPMIPPIQIQAGEARRQIVKIEATD 77
            +V+  +    A     ++ + + D NDN P+    L  +  ++ +    +R + ++ A+D
Sbjct: 1337 EVVVSDNAAPALRSTATVVIKVLDSNDNRPKFTDKLFHVQLLERRWQSGKRDVCRVVASD 1396

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KS 135
             D G NA +TY +   S+    +F+IDP +GV+ + G    G    +T++ATD G   +S
Sbjct: 1397 EDEGSNAVVTYKLQDNSD---ERFQIDPLTGVVTSHGDFWPGNYSILTIKATDGGSPPRS 1453

Query: 136  SQTIVEVS--VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            S T +++    VP P+     F++  +   V E   + + V  I +
Sbjct: 1454 STTRLDIEWVAVPPPSADPITFEEPHFTFAVMETEPVTNMVGVIMM 1499



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 13/152 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYH 92
            ++ V + D+NDNAP   +  P+   A  A R      + ++ A+D D G N ++TY+I  
Sbjct: 2381 TIEVEVEDVNDNAP---VFSPLTYAANIAERLPVNTSVTRVSASDKDSGRNKDLTYAIVT 2437

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGP 148
                    F I+ ++G+I T   L   E  Q+ + V+ATD G    SS+  V +++    
Sbjct: 2438 TGEDDADSFEINQKTGLIVTRKVLDYEERKQFKLKVRATDNGSVPLSSEAFVTINIT-DV 2496

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P F  + +   V E A+    V  I  S
Sbjct: 2497 NDNPPDFISSEFKAKVDETANCGHLVVKIQAS 2528



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 9/114 (7%)

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQ 127
            V + ATD D  +N  + YSI  VS   L +F ID RSG I T    +  EQ   YS+TVQ
Sbjct: 3562 VHVTATDQDGPINNLLRYSI--VSGDPLQQFSIDHRSGEI-TVRTALDREQTPHYSLTVQ 3618

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            A D G    SS  ++ ++V    N   PVF Q  + + + EG ++ ST+  + V
Sbjct: 3619 AADEGSPPLSSAALITITV-SDVNDNPPVFSQVNHHLLLQEGEAVGSTILQLVV 3671



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F  QV    +    A+ P  +TV + D+ND AP+   P++    I       ++V++ A 
Sbjct: 1962 FTVQVKDSGELSLRAAKPAKVTVRILDLNDCAPQFATPVLQSSVIWPAVRDAEVVRVTAR 2021

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
            D+D  V+       Y ++   LH+ F I P +GVI  +        Y + V+A+D   K 
Sbjct: 2022 DDDSAVS-------YSITEGNLHQAFSIHPNTGVISVSNVTDFQPFYQLLVRASDGLYKD 2074

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
            S  +V+V+V    ++    FQQ  Y   VSE      T+A + V    SGC +
Sbjct: 2075 S-AVVKVNVTNLTDSDLQ-FQQRVYSAGVSENLKAVQTLAALKV----SGCFL 2121



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 23/172 (13%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVK 72
           ++ F V+A    G A +    L V + D NDN+P   +      QA           +VK
Sbjct: 562 RYEFDVVA--NHGEAET---HLVVEITDENDNSP---LFTQTSYQATLDENTPVGSSVVK 613

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQAT 129
           + A D+D G N  +TYSI H   +    F IDP +GVI T+  L   +A   Y + V A+
Sbjct: 614 VTAWDSDKGKNGFVTYSIAH---SDPLPFTIDPFTGVILTSEHLDFELANRLYHLRVWAS 670

Query: 130 DTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           D+G   SQ + E  V   +   N   PVF++   ++ V     +   VA ++
Sbjct: 671 DSGSPFSQ-VSECPVTITLNNINDNFPVFERVGCNITVPLDLPVGREVAKLS 721



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            V+ R+++         + +++ D ND++P    P              ++++++A D D 
Sbjct: 1649 VMVRDQEIPMKRNFAKVVIHVEDCNDHSPAFLSPRYEASISNQAPTGSEVIRVKALDKDT 1708

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT 138
            G NA+I+YS+ H  NT  + F ID  SG I  +  L    Q  + ++V+ATD G      
Sbjct: 1709 GSNADISYSL-HSGNTD-NIFSIDAESGSIRVSKPLGLQHQDHFHLSVKATDQGFPQRSD 1766

Query: 139  IVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +  + +    + R+ P F  + Y   +SE ++  + V T++ S  A+
Sbjct: 1767 LCTLHLHIRLSDRTPPTFSSDEYLTEISELSAPGTPVVTVSASSPAA 1813



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEAT--DNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P+   +P   + + ++    V  +AT  D+D G N  I YS+        
Sbjct: 2182 VFIDDVNDNSPQFLNLPFSMMISEDSEPGDVLYQATAIDSDQGENGSIIYSLVE----DF 2237

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              F IDP  G I     L   A  +Y +TV ATD G     T+ ++S +   N  +P+FQ
Sbjct: 2238 DFFWIDPDVGDISLKKPLDFEALNKYVLTVLATDEGEPGLSTVSQLS-IQVRNQSNPIFQ 2296

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEE 193
               Y + V E     +T+  +          I N EE
Sbjct: 2297 TLLYPLKVPENVPPFTTILHVQARNPEGYRLIYNLEE 2333



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 25/189 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +++ + LDR+         +V+A++  G  A   V +   L D NDN P        Q +
Sbjct: 2661 IITTQPLDRENSTQKVVAIKVMAKDGGGRVAFCTVKII--LTDENDNVP--------QFK 2710

Query: 63   AGEARRQI----------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            A E +  I          +++ A D D G NA++TY++            I+P +GV+  
Sbjct: 2711 ASEYQVSIQSTVNKGSPVIQVMAYDADDGKNADVTYTVDEAEEVTEDIIEINPFTGVVSV 2770

Query: 113  TGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
               L+  E   ++  V+A D      +S   V++ VVP P    P F +  Y  + +E  
Sbjct: 2771 KESLVGMENRIFNFKVKARDGSLPFYNSTVPVQMKVVP-PEVPLPKFSEPLYSFSAAEDF 2829

Query: 169  SINSTVATI 177
             I S + ++
Sbjct: 2830 PIGSEIGSV 2838



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++  VIA+    GT  +  VS+++ + D+NDN P     P      +   A   ++++ A
Sbjct: 2887 YQIDVIAQGNHNGTDVASLVSVSIQVQDVNDNQPVFDASPYRAFLTENMPAGTTVIQVTA 2946

Query: 76   TDNDLGVNAEITYSIYHVSNTGL----HKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             D D   N  +TYS+  +++         F ID  SG I T  ++       +   V AT
Sbjct: 2947 NDPDTDTNGLVTYSLEPLADGAQLDISQVFSIDGDSGWITTLREVDCERSRMFRFNVVAT 3006

Query: 130  DTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            D GG+   SS   VEV +V   N   P F +  Y  +V E
Sbjct: 3007 DHGGEVKLSSSVRVEV-MVTDENDNPPTFSEEVYRGSVVE 3045



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 101  FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F ++P +G+I     L     E Y + V A+ T G  S+T V + V+   N  +P FQQ+
Sbjct: 1827 FYLNPYTGLISIQKHLDFEDHESYRLEVAASTTAGALSKTFVSIYVI-DENDNAPRFQQS 1885

Query: 159  TYDVNVSEGASINSTV 174
             Y  ++SE A +NS V
Sbjct: 1886 EYQGHISESAHVNSMV 1901



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 12/178 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+V+++ LD +     +F+ +V A +      S    +T+N+ D+NDN P   +    + 
Sbjct: 2454 LIVTRKVLDYE--ERKQFKLKVRATDNGSVPLSSEAFVTINITDVNDNPPDF-ISSEFKA 2510

Query: 62   QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KL 116
            +  E       +VKI+A+D D      + Y I  ++      F I+  SGVI  +   K 
Sbjct: 2511 KVDETANCGHLVVKIQASDPDSADTKNLKYKI--LTGNRDRYFNINESSGVISFSNVCKR 2568

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                 Y++TV  +D G       V + ++   N  SP F+Q+ Y+  ++E A   + V
Sbjct: 2569 NLDPFYNLTVAVSD-GVFQKTAPVTIDMI-NSNRYSPYFKQSVYEAELAENAQAGTRV 2624



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 15/167 (8%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEAT 76
            F ++A+   G   S    + + + D+NDN P       M+          R  +  I A 
Sbjct: 3210 FNLVAKATDGGGRSCQADIQLMVQDMNDNQPLFSASHYMV--TVFDNTTVRTPVAVIYAK 3267

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-- 132
            D D G+N+E+ YS+    + G   F +D  SGV+     L       + + V+ATD G  
Sbjct: 3268 DPDAGINSEVRYSLI-AGDAGY--FSLDEFSGVLRLERPLTPDTPPTFVLKVKATDRGLP 3324

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                S   V V VV   +   PVF  + Y   + E  ++ S V +++
Sbjct: 3325 RQLYSTATVTVDVV-SLDDYQPVFLSSDYTAQLPESLAVGSEVLSVS 3370



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 31/133 (23%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI-------- 70
            +R +V A    G  +   VS+ V   D NDNAPR         Q  E +  I        
Sbjct: 1850 YRLEVAASTTAGALSKTFVSIYVI--DENDNAPRF--------QQSEYQGHISESAHVNS 1899

Query: 71   ---------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAG 119
                     + + A+D D G N+ +TY I  +    L  F+IDP  G I         A 
Sbjct: 1900 MVMGQSNAPLVVHASDADRGFNSLLTYQI--LEPEALRVFQIDPSMGTISLVSAVDFEAK 1957

Query: 120  EQYSITVQATDTG 132
             +Y  TVQ  D+G
Sbjct: 1958 AEYHFTVQVKDSG 1970



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 10/111 (9%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            +V + A+D DLG +  + Y I+    +GL  F ID  SGVI T+ +L+  E    Y ++V
Sbjct: 1178 VVTLTASDKDLGRDGVVRYHIH--DGSGLGVFTIDEESGVIRTS-ELLDRETVPHYWLSV 1234

Query: 127  QATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA-SINSTV 174
             ATD G +   S T V + V+   N  +P   Q  Y  +V E    +NS +
Sbjct: 1235 FATDLGTEPLVSWTHVFLEVL-DVNDNAPQLSQPIYFASVQENVEKVNSVI 1284



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 45   DINDNAPRLPMIPPIQIQAG----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            D+NDNAP+L    PI   +     E    ++++ ATD D+    ++++ +          
Sbjct: 1256 DVNDNAPQLSQ--PIYFASVQENVEKVNSVIQLSATDVDVSSEGKLSFQMLESHRV---Y 1310

Query: 101  FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            F IDP++GVI T   L   E  ++SI V  +D    + ++   V + V   N   P F  
Sbjct: 1311 FDIDPKTGVISTLAALDREEKPEHSIEVVVSDNAAPALRSTATVVIKVLDSNDNRPKFTD 1370

Query: 158  NTYDVNVSE 166
              + V + E
Sbjct: 1371 KLFHVQLLE 1379



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           +T+S+   SN+    F+I+P++G+I T  K      ++Y   V A + G   +  +VE++
Sbjct: 527 VTFSMK--SNSDSSDFKINPKTGIIVTAAKFDYEKKDRYEFDVVA-NHGEAETHLVVEIT 583

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                N  SP+F Q +Y   + E   + S+V  +T
Sbjct: 584 ---DENDNSPLFTQTSYQATLDENTPVGSSVVKVT 615



 Score = 38.9 bits (89), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           +  +V++ ATD D G NAE     Y++  +  H F +DP +G +    KL     +++ +
Sbjct: 301 KSSVVRVSATDADEGSNAE----FYYLFTSRAHPFAVDPFTGTVSLVKKLNYTQTQKFEL 356

Query: 125 TVQATD 130
           TV A D
Sbjct: 357 TVLAED 362



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I++ +A D D G N ++ +++   +  G   F ID  SG +     L   + E Y + + 
Sbjct: 861 ILQFKAADGDSGFNGQVVFALSSGNEDGC--FCIDTFSGELRLVCSLDRESKEFYILNIT 918

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           A D G   +S   ++ V+++   N   P+F Q  Y + V E  ++ S V T
Sbjct: 919 AYDLGMPQRSVWKLMAVNIL-DVNDNPPMFDQPRYVIRVPENTAVGSVVFT 968


>gi|405953857|gb|EKC21435.1| Protocadherin Fat 4 [Crassostrea gigas]
          Length = 2261

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 14/154 (9%)

Query: 37  VSLTVNLNDINDNAPRL--PMIPPIQIQAG--EARRQIVKIEATDNDLGVNAEITYSIYH 92
           V +TVN+ D+NDN+P    P      ++     + + ++ ++ATD+D G   +I Y+I  
Sbjct: 354 VQVTVNVRDLNDNSPVFEAPRYTDTIVEGDYTTSNQVLLDVKATDDDSGAFGDIAYTIQS 413

Query: 93  VSNTGLHKFRIDPRS----GVIETTGKLIAGEQYSITVQATDTGG-----KSSQTIVEVS 143
           VSN G  KF I P S      I   G +  GE Y I VQATD G      +S+   VEV+
Sbjct: 414 VSNNGASKFTIQPSSQQGQATISCVGTVAEGEIYVIMVQATDQGQPIAERRSTSVPVEVT 473

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V P   TR PV     + ++VSE   ++S++ T+
Sbjct: 474 VTP-LGTRPPVIDSAAFTISVSEAVPLSSSLWTV 506



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 40  TVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA-EITYSIYHVSN 95
           TV +  I + AP  P      +     R    +++   ATDND      ++TYS+     
Sbjct: 842 TVTITVIKNTAPFFPAPKTTTVTIPNTRNSDSEVITYTATDNDARPEFNQVTYSMV-TDT 900

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
           T    FR++P SG I     L A +  +Y +T+ ATD GG S    V VSV    N    
Sbjct: 901 TAASLFRLEPTSGRITLVSSLTADDAPRYLLTITATDNGGLSDTGTVTVSVNRNLNDPQW 960

Query: 154 VFQQNTYD--VNVSEGASINSTVATITVSRL 182
           +     Y   VNV+E   +  TV T++   L
Sbjct: 961 LPTGGPYSATVNVTENRPVLETVYTLSTRDL 991



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEAT 76
           ++   +  +++ G  A    +LT+ + D+NDN P  +P      +  G     +  + AT
Sbjct: 551 QYTLNIQVQDQSGLTAQT--TLTIIVQDVNDNNPVFIPTSYTFSVFEGRTNEPVGTVTAT 608

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
           D+D G NA + Y I   S+T          +G I T   L     +++ I V  TD GG 
Sbjct: 609 DSDTGANALVNYQISPYSSTDSANLFFITSTGAITTATALDYEVKQRHVILVLGTD-GGV 667

Query: 135 SSQT 138
           SS+T
Sbjct: 668 SSRT 671



 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 15/114 (13%)

Query: 47   NDNAPRLPM-IPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF- 101
            N N+PR    +  + I+ GE  +    +++I ATD+D G + +I + I  VSN G  KF 
Sbjct: 2149 NINSPRFFAPVYFVNIKEGEYSKNNLHLIQISATDDDDGYDGDILFDIQSVSNNGNDKFK 2208

Query: 102  ----RIDPRSGVIETTGKLIAGEQYSITVQATDTG-----GKSSQTIVEVSVVP 146
                R++  + +I  +G L  GE Y I V+A+D        +SS   VEV VVP
Sbjct: 2209 LEQDRLNTNANII-CSGTLNRGETYVIMVRASDQALQMDRRRSSYVPVEVRVVP 2261



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 68   RQIVKIEATDNDLGV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-QYSIT 125
            R   ++ ATD+D    N +I Y I       ++ F + P++G I     L   + ++   
Sbjct: 2060 RPFTQVTATDSDTQAPNNQIMYKITESETPAINYFYLHPQTGHISLKQCLNGTDNRFIFN 2119

Query: 126  VQATDTGGK--SSQTIVEVSVVPGPNTR----SPVFQQNTYDVNVSEG 167
            + ATD G    S   +V+V V   P  R    SP F    Y VN+ EG
Sbjct: 2120 ITATDGGSPPLSDHALVDVEVKGCPKCRTNINSPRFFAPVYFVNIKEG 2167


>gi|260837445|ref|XP_002613714.1| hypothetical protein BRAFLDRAFT_130689 [Branchiostoma floridae]
 gi|229299103|gb|EEN69723.1| hypothetical protein BRAFLDRAFT_130689 [Branchiostoma floridae]
          Length = 1875

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK-LIAGEQYSITVQATDT 131
           +  TD D G   E+T+SI HV+N G +KF +  R+G +    + L+ GE Y++TV A D 
Sbjct: 815 LNVTDGDGGAYGEVTFSILHVTNNGENKFAVQERNGTVTLEDESLLTGEVYTLTVMAADG 874

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 KSS T +EV V+P  N   P F    Y V++SEGA I +++ T+
Sbjct: 875 APEDERKSSVTTLEVRVIPANNQSRPTFDPARYYVSISEGAQIGTSLTTV 924



 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 27/200 (13%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDN-APRLPMIPPI 59
           YL+++ ++LDR+  +   +   V+A + + T  +  V   V+ ND      P  P I  +
Sbjct: 560 YLIIT-QSLDREEQD--TYELSVMASDGELTNMTTVVVTVVDRNDFTPQFHPPGPYITRL 616

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK-LIA 118
           +  A  A   + ++  TD D G   E+T+SI HV+N G +KF +  R+G +    + L+ 
Sbjct: 617 KDDA-LAGHVVYELNVTDGDGGAYGEVTFSILHVTNNGENKFAVQERNGTVTLEDESLLT 675

Query: 119 GEQYSITVQATDTGGK---------------------SSQTIVEVSVVPGPNTRSPVFQQ 157
           GE Y++TV A D   +                     SS T +EV V+P  N   P F  
Sbjct: 676 GEVYTLTVMAADGAPEDERKYGAHIVFYLPSLQCIIWSSVTTLEVRVIPANNQSRPTFDP 735

Query: 158 NTYDVNVSEGASINSTVATI 177
             Y V++SEGA I +++ T+
Sbjct: 736 ARYYVSISEGAQIGTSLTTV 755



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
            + + + LDR+  +  ++   V A +K     S  V+LTVN+ DINDN+P+ P  +  + +
Sbjct: 1056 IYATQRLDREEQD--QYVLVVTANDKAPDGRSSSVTLTVNVTDINDNSPQFPEDLYEVVL 1113

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AG 119
               E    ++ ++ATD DL  +  +TYSI   ++     F ID  +G +     L     
Sbjct: 1114 DENENATVLLTLQATDADL--DPSLTYSI---ADGDTSMFTIDSTTGQLSNLQPLDFEMD 1168

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +Y++ VQA D   + + T+  +  V   N  +PVF QN Y   V + A + + V T+
Sbjct: 1169 PEYTLVVQADDGQNQGNTTV--IVAVNDMNEFAPVFSQNVYTAEVLDNAVVGTIVTTV 1224



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 13/130 (10%)

Query: 70   IVKIEATDNDLG--VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
            +  + ATDND+    +A++ Y +    +     FR+D  SGV+ +   L    G+ Y + 
Sbjct: 1221 VTTVNATDNDVKGTPSAQVLYRLADEDSMAAGLFRVDRVSGVVTSRVNLRESPGDTYQLA 1280

Query: 126  VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDV-NVSEGASINSTVATITVSRL 182
            V+A D G    SSQT V ++V+   +TR PVFQ+N Y+V ++SE    N+ V T  V+  
Sbjct: 1281 VEAYDGGDPVMSSQTTVNITVLSS-DTR-PVFQKNLYEVPSLSE----NTPVGTDIVNVF 1334

Query: 183  ASGCAIMNKE 192
            A G A  + E
Sbjct: 1335 AEGAAAYSIE 1344



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 18/146 (12%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV-KIEATDNDLGVNA 84
            + GTA +   ++ V + DINDN P      +    IQ  +    ++ ++E+TD D+G   
Sbjct: 981  ENGTATA---TVEVVVTDINDNNPIFNSSFLTEFTIQEEQDPPVLIGRVESTDADIGAKG 1037

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIV 140
            E+ Y +   S      F I P  G I  T +L   E  QY + V A D    G+SS   +
Sbjct: 1038 EVEYHLVSSS------FEISP-VGAIYATQRLDREEQDQYVLVVTANDKAPDGRSSSVTL 1090

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSE 166
             V+V    N  SP F ++ Y+V + E
Sbjct: 1091 TVNVT-DINDNSPQFPEDLYEVVLDE 1115


>gi|307184762|gb|EFN71076.1| Protein dachsous [Camponotus floridanus]
          Length = 2212

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           ++ +  +LDR+  +  ++ F V+A +  +  A S  VS+ +N++D+NDNAP     P   
Sbjct: 774 VITTAGSLDRE--SKSRYLFHVVATDSGKYDAKSTSVSIEINISDVNDNAPVFAEYPFRT 831

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             PI IQ G+    I+++ A D D G N +I YS  H       KFRI P +G +  +  
Sbjct: 832 RVPIGIQPGQ---NILRVVAKDVDDGANGDIVYSFLHEQEK--PKFRIHPSTGEVTASLS 886

Query: 116 LIA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASI 170
           L    G+ Y + V A D G   KS++ ++E+ +    +    + FQ +TY+V V E +  
Sbjct: 887 LSQDNGKIYHLEVLARDKGNPPKSAKGLIELQIGDLSDLAPALKFQNDTYNVVVQENSVT 946

Query: 171 NSTVATITVSR 181
            + +A IT  R
Sbjct: 947 GTEIAQITAVR 957



 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 97/184 (52%), Gaps = 11/184 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           + ++E LDR+  +  +   +  AR++   + +  V L V + D+NDN+P +  P    + 
Sbjct: 18  ITTREPLDRETKDVHELVLE--ARDQGAPSRAARVPLKVTVLDVNDNSPEIVDPQGDVVS 75

Query: 61  IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
           ++  +    ++ K+ A D DLG NA +TYSI    ++ G + F IDP +G+I T   L  
Sbjct: 76  VREEQPPGTEVAKVRALDMDLGENASVTYSILKDRDSDGYNVFTIDPITGMIRTKAVLDH 135

Query: 119 GEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E+  Y ++V+ATD G     +I  + V V+   + R P F  ++   NV E ASI   V
Sbjct: 136 EERNVYRVSVKATDAGHLPRHSIRALRVEVLALADNR-PTFTSSSLTFNVREDASIGHEV 194

Query: 175 ATIT 178
            +++
Sbjct: 195 GSVS 198



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 22/148 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L ++L D+NDN+P+ P+   +Q   GE       +    A+D D G+   + YSI   + 
Sbjct: 1573 LRIHLEDVNDNSPKFPVSEYLQF-VGENEPIGTIVFSSRASDLDRGIFGSLNYSIVSAAA 1631

Query: 96   TGLHK-------FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            +G          F +D +SG++ TT  +   EQ   Y+ T++ATD GG+S+   V V + 
Sbjct: 1632 SGFSDIDDSWKLFAVDEKSGIV-TTRAVFDYEQRNRYAFTLRATDMGGRSAAVRVRVEI- 1689

Query: 146  PGPNTRS---PVFQQNTYDVNVSEGASI 170
               ++R    P F +  Y   +  G SI
Sbjct: 1690 ---DSRDEFFPQFTERMYRFGIKSGVSI 1714



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 38/197 (19%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V+S  NLDR+     K+   ++A+++   +     +LTV + DINDNAP       I+  
Sbjct: 646 VLSMSNLDRE--TVPKYVLTILAKDRGRPSREARCNLTVIVLDINDNAPIFVQNQYIESH 703

Query: 63  AGEA---------------------------RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           A                                 ++ ++ATD D GVN +ITY+I   ++
Sbjct: 704 AHNGFSYGSSNYPANYYPTKYVTTISEDVAPDSSVMSVKATDPDQGVNGKITYAI---AD 760

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNT 150
                FR+D  +GVI T G L   +  +Y   V ATD+G    KS+   +E++ +   N 
Sbjct: 761 ETSWLFRVDNLTGVITTAGSLDRESKSRYLFHVVATDSGKYDAKSTSVSIEIN-ISDVND 819

Query: 151 RSPVFQQNTYDVNVSEG 167
            +PVF +  +   V  G
Sbjct: 820 NAPVFAEYPFRTRVPIG 836



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 22/191 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPP 58
           +LVV+  +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDNAP+ P   P
Sbjct: 230 HLVVA-HSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIIIEDANDNAPKWPQ-DP 285

Query: 59  IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG 114
           I I+  E       I  + A+D D G+N ++ YS+     + G   F +D  +G +    
Sbjct: 286 ITIRVSEKAAIGSTIYNLTASDLDSGLNGDLRYSLVDEFPSKGY--FAVDSLTGAVTLAK 343

Query: 115 KLIAGEQ--YSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF-----QQNTYDVNV 164
           +L   E+  Y++ ++A+D    G + + T+    +V   N   PVF      + T   N+
Sbjct: 344 QLDREERADYTLILKASDRAPPGEQLASTVTAKIIVLDQNDNDPVFVAPDSNEITVPSNL 403

Query: 165 SEGASINSTVA 175
             GAS+   VA
Sbjct: 404 LLGASLVRVVA 414



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 23/188 (12%)

Query: 10   DRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA------ 63
            D++P    +    ++A+          V + V L+D+NDN       PPI  Q       
Sbjct: 1028 DQEPRESSRHVLNIMAKTTGPDVLEAYVKVIVRLSDVNDN-------PPIFTQTQYSATV 1080

Query: 64   --GEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLI-- 117
              G  +   +VK+ A D D G+N+ I Y I  V     + F I  P SG++ T   L   
Sbjct: 1081 LEGNTKGDFVVKLSADDADQGLNSRILYHI--VDGNPDNAFTISPPHSGIVRTNIVLDRE 1138

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E+Y +T+ ATD G         +SV V   N   P F ++   ++VSEG ++ + + T
Sbjct: 1139 VREKYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPKHNI-ISVSEGTAMGTVLTT 1197

Query: 177  ITVSRLAS 184
            +T + + S
Sbjct: 1198 MTANDVDS 1205



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 7/152 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 1142 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPKHNIISVSEGTAMGTVLTT-MTA 1200

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  +TY   ++++ G   F ID   G +    +L A    +YS+ V A+D  G  
Sbjct: 1201 NDVDSSPVLTYRFGNLTSPG--PFSIDRYGGKVVLRKRLDAETRSEYSLQVIASD--GIH 1256

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              T   V  V   N  +P F+Q  Y   +SEG
Sbjct: 1257 EATTDLVVRVTDLNDNAPRFEQAVYVAVLSEG 1288


>gi|292620786|ref|XP_001920058.2| PREDICTED: protocadherin Fat 2 [Danio rerio]
          Length = 4342

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 25/187 (13%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            + V+SK  LDR+  +  K+  ++IA + +  T+A+V V +     D+NDN+P        
Sbjct: 2957 WTVISKSPLDRE--DKDKYTLKIIATDGRFQTSANVEVHVL----DLNDNSPFCE----- 3005

Query: 60   QIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            Q+Q  EA  +       I+KI A+D D+G N ++++++ H  N    KF +DP++G + T
Sbjct: 3006 QLQYTEAVMENSSSGKVILKISASDPDIGTNGQVSFTL-HGPNAD--KFHLDPKTGELFT 3062

Query: 113  TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
               L     ++Y + V+ATD GG+S Q  V + +V   N   P F  + Y+V V +  +I
Sbjct: 3063 LAVLDREREKEYDLVVKATDGGGRSCQADVTL-MVQDMNDNPPQFSTSHYEVTVFDNTTI 3121

Query: 171  NSTVATI 177
             + +A I
Sbjct: 3122 RTPIAVI 3128



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 41   VNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +N+ D+NDN P         + P  I  GE   Q   + A D D   N  I YSI  VS 
Sbjct: 3303 INITDVNDNPPVFNRSSYSTVIPEDISPGEMALQ---VRAIDLDGPPNNFIIYSI--VSG 3357

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                +F IDPR+G I     L   E   YS+TVQA D G     + V+V+V V   N   
Sbjct: 3358 DPKQQFSIDPRTGFITLRSMLDREEITHYSLTVQAADEGDPPLSSAVQVTVTVSDVNDNP 3417

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVS 180
            P+F +  + + V EG ++ S +  + V+
Sbjct: 3418 PMFSKINHSLIVQEGEAVGSGILQLLVT 3445



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 11/164 (6%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAP----RLPMIPPIQIQAGEARRQIVKIEATD 77
            +V+  +K     S   ++ + + D NDN+P    +L  I   + Q+    + I ++ A D
Sbjct: 1210 EVMVSDKGEPPLSSTATVVIEVLDENDNSPQFSHKLFQIKLPERQSTAEPQDIYRMVARD 1269

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KS 135
            +D+G N  ITYS+   +N G  +F I P +GV+   G+ + G    +T+QATD G   + 
Sbjct: 1270 DDVGPNGMITYSL-EDNNEG--RFDIHPDTGVVTARGQFVRGNYSILTIQATDQGNPPRM 1326

Query: 136  SQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASINSTVATI 177
            S++ + V  +P P   S V  F +  ++  V E   +   V  I
Sbjct: 1327 SKSRLHVEWLPQPEPSSDVLAFDEPPFNYVVMETDPVTDMVGII 1370



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 21/190 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++V+ ++LD +  N   + F V A + +     +     V++ D NDNAP    +P  Q 
Sbjct: 416 VIVTSQSLDFE--NRNHYEFDVTANDGEAVTRVI-----VDITDENDNAPSF-TLPSYQA 467

Query: 62  QAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              E  R    ++ + A D D   N  +TY+I   +NTG   F IDP +GVI T+ +   
Sbjct: 468 SLPENVRIGTSVLSVSAIDVDKDNNGFVTYAI---ANTGPVPFSIDPLTGVISTSQEFDY 524

Query: 117 -IAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            +    Y + + A+D+G    + S+  V +++    N   PVF++   + ++    ++  
Sbjct: 525 ELMKRWYHLRIWASDSGNPFNRVSECTVTITMT-NVNDNVPVFERVACNASIPRDFAVGE 583

Query: 173 TVATITVSRL 182
            +A I+   L
Sbjct: 584 IIAEISALDL 593



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 16/159 (10%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEIT 87
            GT A   V   +++ DINDNAP    +  +    +       ++++ A D D   NAE T
Sbjct: 2249 GTFAEAKVE--IDVEDINDNAPVFQNLSYVADVFEGLPIGTSVLQVSAVDRDADKNAEAT 2306

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQTIVE 141
            Y +    +   H F IDP SGV+ TT  L   + +Q+++ V+ATD G       +  IV 
Sbjct: 2307 YQLIDKES---HFFEIDPLSGVLVTTQVLDYESTQQFTLKVKATDKGVPPLSGEAHIIVN 2363

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V  V   N   P F + +Y  ++ E A+  + V  +  S
Sbjct: 2364 VIDV---NDNPPDFSEPSYRASLDEMATCGNIVIKVQAS 2399



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 24/194 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQ-----------GTAASVPVSLTVNLNDINDNAPRLP- 54
            +    DP     F   V+ RE++           G   S    +T+ + D+NDN P+   
Sbjct: 3049 DKFHLDPKTGELFTLAVLDREREKEYDLVVKATDGGGRSCQADVTLMVQDMNDNPPQFST 3108

Query: 55   -MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
                         R  I  I A D D G+N+E+ YS+   +++G   F +D  SGV+   
Sbjct: 3109 SHYEVTVFDNTTIRTPIAVIYAKDPDTGINSEVRYSL-QGADSGF--FSLDEISGVLRLE 3165

Query: 114  GKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
              L       Y + V+ATD G      S  ++ V VV   + + P+F  + Y V ++E +
Sbjct: 3166 RSLADETKSTYEMKVKATDRGLPRHLFSFAMITVHVVILSDYQ-PLFLSSEYSVQIAESS 3224

Query: 169  SINSTVATITVSRL 182
             + S V  I+VS L
Sbjct: 3225 QVGSEV--ISVSAL 3236



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 17/189 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            VV + N+D +      ++  VIA+    GT  +  VS+ + + D+NDN P   M      
Sbjct: 2742 VVLQNNIDHE--KTKMYKIDVIAQGNHNGTNVASLVSVHIEVQDVNDNKP---MFEADTY 2796

Query: 62   QAGEARR-----QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            +A  A        ++++ A D D  +N E++Y++   S+     F ID ++G I T  + 
Sbjct: 2797 KAFLAENLPSGTTVIQVTANDADANINGEVSYTLEPESDDIGDMFAIDSQTGWITTLKEA 2856

Query: 117  IA--GEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             +   + +   V ATD G    +S+  +VEV++    N   P F +  Y  ++ E +   
Sbjct: 2857 DSETKQLHRFFVVATDHGDALKQSASVLVEVTLT-DENDNPPQFTEELYQGSILENSRPG 2915

Query: 172  STVATITVS 180
              + T+T +
Sbjct: 2916 ENIVTLTTA 2924



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 39   LTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            + V++ D ND+ P         +I  + +   E    +++++A D D G NA+I YS + 
Sbjct: 1538 VVVHVEDCNDHIPSFLDTHYEGIISNLALTGTE----VLRVKALDKDTGSNADIVYSFHS 1593

Query: 93   VSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
              N     F+ID  +G I  +  L  +  E Y +TV+ATD G      +  V++ +    
Sbjct: 1594 GGNVD-GAFKIDQGTGSIRVSDALDRLPQEHYHLTVKATDQGFPQRSALCPVTITIKLSE 1652

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
               P F    Y   +SE     S V +++
Sbjct: 1653 FTPPRFSSKEYITEISEAMPPGSPVLSVS 1681



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 9/158 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN P +  +P   + + E      + ++ ATDND G N  I +S+    + GL
Sbjct: 2056 VYIDDVNDNVPEILNLPKTLLISDETEPGDVLFQVLATDNDFGENGSIIFSLE--DDFGL 2113

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRID   G +     L   +  +Y +TV  +D G  S   I  +  +   N   P+FQ
Sbjct: 2114 --FRIDLYLGDVSLQRPLDFESMNKYVLTVLVSDDGQPSLSAIGTI-YIQVQNRSHPIFQ 2170

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEEN 194
               Y + + E  +  +T+  +          I N EE+
Sbjct: 2171 SMYYPLKLPENITPFTTILHVQARNPEGYRLIYNLEED 2208



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           IN ++P+  +  P  I   E     R +++  ATDND G N ++ YSI   +  G   F 
Sbjct: 707 INQHSPKFVISTPGSIDIREDFALNRSVLQFNATDNDSGFNGKLVYSISSGNEDGC--FT 764

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           ID  +G ++    L     E Y + +   D G   + T   ++V +   N   P+F Q+ 
Sbjct: 765 IDVNAGDLKVICALDREQKEFYILNITVYDLGYPQTSTWKLLAVNILDANDNPPLFSQSR 824

Query: 160 YDVNVSEGASINSTVATI 177
           Y V + E   ++ ++  +
Sbjct: 825 YVVTIPENTEVDKSIFKV 842



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +V+ + LDR+ P+      +++A++  G      V +   L D NDN P+       I I
Sbjct: 2530 IVTSQPLDRENPSQRVIAIKIMAKDGGGRVGFCTVKII--LTDENDNVPQFKASEYDISI 2587

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+   +   +++I A D D G NA++TY++            ++P +GV+     L+  E
Sbjct: 2588 QSTVNKGSPVIQIMAYDADEGKNADVTYTVEEADEVTEDIIEVNPFTGVVSVKESLVGLE 2647

Query: 121  Q--YSITVQATDTG 132
               ++  V+A D G
Sbjct: 2648 NKIFNFKVKARDGG 2661



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 80   LGVNAEITYSIYHVSNTGL--HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            L V+A    S+ +  N G     F I+  SG++     L   +   Y + + AT+T G S
Sbjct: 1678 LSVSARCPSSVLYRINEGDPNGTFHININSGLLSVKNALDFEQHSSYHLQISATNTAGIS 1737

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            S  +V V V+   N  +PVF Q+ Y   +SE A +NS V
Sbjct: 1738 SDAVVFVYVIDA-NDNAPVFHQDVYYGQISESAPVNSMV 1775



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 19/139 (13%)

Query: 39  LTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
           L VN+ D NDN P          IP    +  E  + I K+ A D DL  N    YS++ 
Sbjct: 806 LAVNILDANDNPPLFSQSRYVVTIP----ENTEVDKSIFKVNAVDFDLDNNGAFKYSLFT 861

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE---VSVVPG 147
            ++     F+I+  +GV++  G L      +Y +T++A D      Q       V V+  
Sbjct: 862 FTDL----FQIEEDTGVVKVIGPLDRETFRRYDLTIEARDQAKPDPQLFSFTDVVVVLED 917

Query: 148 PNTRSPVFQQNTYDVNVSE 166
            N   P F    Y + V E
Sbjct: 918 INDNPPKFVPTVYKIKVPE 936



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++ + A DNDLG +  + Y I+    +GL  F +D  +GVI+T G L+  E    Y +TV
Sbjct: 1051 VLTLTAVDNDLGRDGVVRYYIH--DGSGLGVFTVDEETGVIQTAG-LLDREVVPHYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             A D G     +  EV + V   N   P   Q  Y  +V E    + +V  ++ + +
Sbjct: 1108 YAKDLGTIPLVSWTEVYIEVWDINDNPPELSQPVYFGSVQENLPKDKSVLKVSATDM 1164



 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
           +  +V++ ATD D+G NAE  YS      T  H F +DP +G +    +L     ++Y +
Sbjct: 166 KSSLVRVSATDADIGSNAEFYYSF----TTRSHPFAVDPFTGTVTLVKRLDTSQRDRYDL 221

Query: 125 TVQATDTGGKSS 136
           TV A D   K S
Sbjct: 222 TVLAEDRKKKIS 233



 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 10/161 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            +F  +V A +K     S    + VN+ D+NDN P    P       +       ++K++A
Sbjct: 2339 QFTLKVKATDKGVPPLSGEAHIIVNVIDVNDNPPDFSEPSYRASLDEMATCGNIVIKVQA 2398

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGG 133
            +D D     ++ Y I    N G + F I+  SG+I  +   K      Y++TV  +D G 
Sbjct: 2399 SDPD--SKDDLQYKILS-GNEGRY-FAINESSGLISFSNVCKRNLDPFYNLTVAVSD-GV 2453

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                  V + +  G N  SP F QN Y+ +++E A + + V
Sbjct: 2454 FQKTAPVNIDMTNG-NKYSPYFTQNIYEADLAENAEVGTRV 2493



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQ 60
             +  +  LDR+      +   V A ++     S  V +TV ++D+NDN P    I   + 
Sbjct: 3371 FITLRSMLDREEIT--HYSLTVQAADEGDPPLSSAVQVTVTVSDVNDNPPMFSKINHSLI 3428

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--I 117
            +Q GEA    I+++  TD D   N    +S + VS      F ID + G++  + +L   
Sbjct: 3429 VQEGEAVGSGILQLLVTDRDTPQNGP-PFSFHIVSGNEDRSFHID-QGGLLSVSSQLRRR 3486

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
               Q+ + +Q TD+G     +I  V +     +R P
Sbjct: 3487 GKPQHLLKIQVTDSGHPPLSSICVVKINITEQSRYP 3522



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F ID ++GV+  T  L   +  ++ +TV+ATD+  G  ++  VE+ V    N  +PVFQ 
Sbjct: 2214 FNIDFKTGVLSVTDFLDFESETKHILTVRATDSVSGTFAEAKVEIDV-EDINDNAPVFQN 2272

Query: 158  NTYDVNVSEGASINSTVATIT 178
             +Y  +V EG  I ++V  ++
Sbjct: 2273 LSYVADVFEGLPIGTSVLQVS 2293


>gi|405951930|gb|EKC19797.1| Protocadherin-like wing polarity protein stan [Crassostrea gigas]
          Length = 927

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 14/154 (9%)

Query: 37  VSLTVNLNDINDNAPRL--PMIPPIQIQAG--EARRQIVKIEATDNDLGVNAEITYSIYH 92
           V +TVN+ D+NDNAP    P      ++     + + ++ ++ATD+D G   +I Y+I  
Sbjct: 307 VQVTVNVRDLNDNAPMFEAPRYTDTIVEGDYTTSNQVLLDVKATDDDSGAFGDIAYTIQS 366

Query: 93  VSNTGLHKFRIDPRS----GVIETTGKLIAGEQYSITVQATDTGG-----KSSQTIVEVS 143
           VSN G  KF I P S      I   G +  G  Y I VQATD G      +S+   VEV+
Sbjct: 367 VSNNGTSKFTIQPSSQQGQATISCVGTVAEGGIYVIMVQATDQGQPIAERRSTSVPVEVT 426

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V P   TR PV     + ++VSE   I S + T+
Sbjct: 427 VTP-LGTRPPVIDAAVFTISVSEAVPIGSFLWTV 459



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 48  DNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP-- 105
           D+AP+  +        G +    V + ATDND G +  I + I  VSN G  KF+++   
Sbjct: 820 DDAPQYLLTITATDNGGLSDTGTVTVSATDNDDGYDGNILFDIQSVSNNGNAKFKLEQDR 879

Query: 106 --RSGVIETTGKLIAGEQYSITVQATDTG-----GKSSQTIVEVSVVP 146
              +  I  +G L  GE Y I V+A+D        +SS   VEV VVP
Sbjct: 880 LNTNANIFCSGTLNRGETYVIMVRASDQALQMDRRRSSSVPVEVRVVP 927



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 38  SLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +LT+ + D+NDN P  +P      +  G     +  + ATD+D G NA + Y I   S+T
Sbjct: 465 TLTIIVQDVNDNNPVFIPTSYTFSVFEGRTNEPVGTVTATDSDTGANALVNYQISSYSST 524

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
                     +G I T   L     +++ I V  TD GG SS+T
Sbjct: 525 DSANLFFITSTGAITTVTALDYEVKQRHVILVLGTD-GGVSSRT 567


>gi|156365975|ref|XP_001626917.1| predicted protein [Nematostella vectensis]
 gi|156213810|gb|EDO34817.1| predicted protein [Nematostella vectensis]
          Length = 943

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 15/172 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           LV +  +LDR+   P    + ++ R   G    V  SLTV L+D+NDNAP    P     
Sbjct: 500 LVKTSSSLDRET-TP---VYTLVVRATDGGGKEVTSSLTVILDDVNDNAPVFSRPEGYTF 555

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
           ++Q G     +  ++ATD D G+NA   YS+  V++    KF ID ++GVI+T+  L   
Sbjct: 556 EVQEGGVGLSVGTVQATDRDSGINAATLYSLKSVAD--YSKFIIDSKTGVIKTSFSLDRE 613

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSE 166
             +Q +I V A DTG  S Q   EV +   V   N   P F Q  Y V V E
Sbjct: 614 TQDQLNIRVIARDTG--SPQLSAEVGIIVNVTDINDHRPAFSQRQYSVTVQE 663



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEA 66
           +LDR+  +  +   +VIAR+      S  V + VN+ DIND+ P        + +Q   A
Sbjct: 609 SLDRETQD--QLNIRVIARDTGSPQLSAEVGIIVNVTDINDHRPAFSQRQYSVTVQEKRA 666

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              I+ + ATD+D G+N+ + Y I    N G + F +D  +G + TTG L      +Y++
Sbjct: 667 SHVILTLTATDSDRGINSALHYMI-DSGNFG-NSFTLDALTGSLSTTGPLDREVRAEYTL 724

Query: 125 TVQATDTGGKSS-------QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V  +D  G +S         +V V  +   N  SPVF Q+ Y + + E  +  + +  +
Sbjct: 725 LVFVSDLQGNASLGIPLRDSAVVNV-FIEDMNDNSPVFPQSQYSLTIPEDTAPGTGIIQV 783

Query: 178 TVSRLASGCA 187
               + SG +
Sbjct: 784 QARDIDSGIS 793



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 18/190 (9%)

Query: 3   VVSKENLDRDP-PNPGKFRFQVIAREKQGTAAS--VPVSLTVNLNDINDNAPRLPMIP-P 58
           + S  N+DR+  P      F+ IA + +G      V V + V + D+NDN P     P  
Sbjct: 81  ITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYRVDVPVRVQIEDVNDNTPVFINTPYS 140

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-------FRIDPRSGVIE 111
           I ++          ++ATD D G NA I YSI   +   + K         + P SGV++
Sbjct: 141 ISVKENTLGTTGFAVKATDADQGQNALIKYSITGGNEANMFKIGAYEGTISVFPDSGVLD 200

Query: 112 TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGA 168
                   + +++TV A+D GG +       SV   V   +    VF  + Y   V+E +
Sbjct: 201 YEKY----KSFNLTVSASDLGGVNGSRTAVTSVFIRVEDVDDLPAVFSPDYYTAKVAESS 256

Query: 169 SINSTVATIT 178
           +    V T+T
Sbjct: 257 TKGFYVTTVT 266



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 28/139 (20%)

Query: 3   VVSKENLDRDPP-NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---- 57
           V  K  LDRDPP N G +  +V                T+ ++D+ND+ P          
Sbjct: 818 VYVKSPLDRDPPRNEGAYTLEV----------------TITISDVNDSPPEFSQAMYSVR 861

Query: 58  -PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P  I  G     +++    D DLG N +I+Y I   ++    +F ++P SG +  + + 
Sbjct: 862 IPENITLGTV---VLQPSCVDRDLGTNGQISYHISSGNSETPPRFSVNPSSGALSVSTEF 918

Query: 117 ---IAGEQYSITVQATDTG 132
                 + YS+ + ATD G
Sbjct: 919 DFDTGRKSYSLVLTATDKG 937


>gi|195159447|ref|XP_002020590.1| GL15355 [Drosophila persimilis]
 gi|194117540|gb|EDW39583.1| GL15355 [Drosophila persimilis]
          Length = 1691

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 14/165 (8%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +S   LDR+     ++  QV A ++ Q T+     ++TV + D NDNAPR  +   +   
Sbjct: 31  LSCRPLDRE--QHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASV 88

Query: 63  AGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           A +A     +V+I+ATD DLGVNA + YS+   +N    +F ID +SG+I T GKL    
Sbjct: 89  AEDAPLGASVVRIKATDADLGVNARLVYSL---ANETQWQFAIDSKSGLITTVGKLDREL 145

Query: 121 Q--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           Q  YS  V ATD G    +S++  V+++V+   + R PVF++  Y
Sbjct: 146 QSSYSFMVLATDGGRYEVRSARVAVQINVLDVNDNR-PVFERYPY 189



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 22/177 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAP---RLPMIP 57
           L+ +   LDR+  +   + F V+A +  +    S  V++ +N+ D+NDN P   R P I 
Sbjct: 134 LITTVGKLDRELQS--SYSFMVLATDGGRYEVRSARVAVQINVLDVNDNRPVFERYPYIG 191

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P  IQ G+    ++K++A D D G+N E+ YS+    + G  KFRI+P +G +  T  
Sbjct: 192 QVPALIQPGQT---LLKVQAHDADQGLNGELLYSLK--GDAG--KFRINPNTGALSATQS 244

Query: 116 LI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
           L   +G    + V A D G   +SS  ++E+ V   P   +PV  FQ  TY V + E
Sbjct: 245 LASESGRLLQLEVVARDKGNPPQSSVGLIELLVGEAPQG-APVLRFQNETYRVKLRE 300



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVS-- 94
              + L+D NDN P+ P+   +   A        + +  A+D D G    + YS+   S  
Sbjct: 957  FHLELHDENDNEPKFPLSEYVHFIAENEPVGSSVFQAHASDLDRGPFGALNYSLAPASGD 1016

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            ++    FR+D  SG++ +         ++Y + ++A+D GGK ++  V V  V   +  +
Sbjct: 1017 DSSWKLFRVDSHSGMVSSAAVFDFEQRQRYDMELRASDMGGKGARVAVRVE-VDSRDEFA 1075

Query: 153  PVFQQNTYDVNVSEGASI 170
            P F + TY   +   A++
Sbjct: 1076 PQFSERTYRFVLPAAAAL 1093



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 29/181 (16%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEA---------- 66
           +++ +VIA +    A +   +LTV +ND NDNAP  L   PP       A          
Sbjct: 609 EYQLEVIASDAAHEART---TLTVRVNDENDNAPVFLAQQPPAYFAILPAVAEVADSLSM 665

Query: 67  RRQIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGE 120
             +++ + ATD D  G N++I YSI    +  +  F +   SGV+      +     A  
Sbjct: 666 DLELLSVNATDADAEGSNSKIRYSI----DPPVEGFSVGASSGVVSVNMSRLQIPESASG 721

Query: 121 QYSITVQATDTGGKSS---QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y + + A D GGK S    T++ V      + RS  FQQ  Y   +SE A + S V  +
Sbjct: 722 DYFVRILARD-GGKHSLFGATLLRVQASDSGSARSQ-FQQTQYRAQISEAAPLGSVVLQL 779

Query: 178 T 178
           +
Sbjct: 780 S 780


>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
 gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
          Length = 3586

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 14/160 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA- 66
            LDR+     ++  QV A ++ Q T+     ++TV + D NDNAPR  +   +   A +A 
Sbjct: 1916 LDRE--QHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASVAEDAP 1973

Query: 67   -RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
                +V+I+ATD DLGVNA + YS+   +N    +F ID +SG+I T GKL    Q  YS
Sbjct: 1974 LGASVVRIKATDADLGVNARLVYSL---ANETQWQFAIDSKSGLITTVGKLDRELQSSYS 2030

Query: 124  ITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
              V ATD G    +S++  V+++V+   + R PVF++  Y
Sbjct: 2031 FMVLATDGGRYEVRSARVAVQINVLDVNDNR-PVFERYPY 2069



 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 9/185 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S    + V+++D+NDNAP +  P    + 
Sbjct: 1208 ISTREPLDRELR--ALYDLVVEARDQGTPVRSARAPVRVHVSDVNDNAPEIADPQEDVVS 1265

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V+I ATD D G NA ITYSI    ++  H  F IDP +GVI T   L  
Sbjct: 1266 VREEQPPGTEVVRIRATDRDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVVLDH 1325

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V ATD G    +T+  + V V   N   P F  ++    V E A +   V 
Sbjct: 1326 EERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAHVGHVVG 1385

Query: 176  TITVS 180
            +IT S
Sbjct: 1386 SITPS 1390



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAP---RLPMIP 57
            L+ +   LDR+  +   + F V+A +  +    S  V++ +N+ D+NDN P   R P I 
Sbjct: 2014 LITTVGKLDRELQS--SYSFMVLATDGGRYEVRSARVAVQINVLDVNDNRPVFERYPYIG 2071

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  IQ G+    ++K++A D D G+N E+ YS+    + G  KFRI+P +G +  T  
Sbjct: 2072 QVPALIQPGQT---LLKVQAHDADQGLNGELLYSLK--GDAG--KFRINPNTGALSATQS 2124

Query: 116  LI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGA 168
            L   +G    + V A D G   +SS  ++E+ V   P   +PV  FQ  TY V + E +
Sbjct: 2125 LASESGRLLQLEVVARDKGNPPQSSVGLIELLVGEAPQG-APVLRFQNETYRVKLRESS 2182



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 453 YLVIVNLPLDRE--STSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQELYHA 510

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ ++Y++     T    F+IDP++G+I T   +  
Sbjct: 511 NVMEVADPGTSVLQVLAHDRDEGLNSVLSYALAETPETHAQWFQIDPQTGLITTRSHIDC 570

Query: 119 GEQ--YSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 571 ETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 630

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 631 KVSASDPDCGVNAM 644



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGV 82
            Q TA   PV     + + + D+NDNAP     +  I + +  +    +    A D D G 
Sbjct: 902  QATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKDSGS 961

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + ++TYS+          F IDPRSG +  +  L     +++S+ V ATD G     T +
Sbjct: 962  SGQVTYSLARERQL----FAIDPRSGHLVLSQHLDYETSQRHSLVVTATDGGVPPLATNL 1017

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF+++ Y VNVSE   +NS +  +  + L +G
Sbjct: 1018 TILVDVQDVNDNPPVFERDEYAVNVSESRPVNSQIVQVNATDLDTG 1063



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  VIAR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 577 QLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 636

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y++       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 637 PDCGVNAMVNYTLGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 695

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +  ++++ +    + R PVF    Y+V++ E     +  A+I V
Sbjct: 696 TTAMIKMQLTDVNDNR-PVFYPREYNVSLKESPPTQTPAASIPV 738



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P + R  ++AR   G   S    L V L D NDN+P+      +  +  G ++   V ++
Sbjct: 2289 PNELRLVLVARSSDGPILSSCAELVVELQDENDNSPQFSQRQFVATVSEGNSKGTFVAQV 2348

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
            +A D+D G NA + Y I  V     + F I+P  SG+++T   L     + Y++ + ATD
Sbjct: 2349 QAFDSDAGANARLRYHI--VDGNHDNAFVIEPAFSGIVKTNIVLDREIRDVYNLKIIATD 2406

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +  + V V +V   N   P F  N   V VSE   + + +A+I+
Sbjct: 2407 EGVPQMTGTSTVRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVIASIS 2454



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV--KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDNAP         +   E    +V   + A+D D G NA+I YSI    N
Sbjct: 1839 TVVITIGDVNDNAPEFRPGSCYGLSVPENSEAVVIHTVVASDMDEGPNADIIYSITG-GN 1897

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSS-QTIVEVSV-VPGPNT 150
             G +KF ID RSG  E + + +  EQ   Y++ VQA+D G  +S Q    ++V V   N 
Sbjct: 1898 LG-NKFSIDARSG--ELSCRPLDREQHARYTLQVQASDRGQPTSRQGHCNITVLVEDQND 1954

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F    Y  +V+E A + ++V  I
Sbjct: 1955 NAPRFDLPKYVASVAEDAPLGASVVRI 1981



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   PP Q  A  A   
Sbjct: 682 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYNVSLKESPPTQTPA--ASIP 737

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQ--YSIT 125
           +V + ATD D G   +++Y I   +  G+  FRID  SG I  T    L    Q  + + 
Sbjct: 738 VVAVVATDPDSGSFGQVSYRIVAGNEAGI--FRIDRSSGEIFVTRPDSLSVRTQPMHMLN 795

Query: 126 VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           + ATD GG       +V +S++     R P+F++  Y+  V E    G  + S +AT
Sbjct: 796 ISATDGGGLRTGHDAVVFLSIIDALQ-RPPIFEKARYNYYVKEDIPQGTVVGSVIAT 851



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 22/169 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
            +++ V++ D+NDN P         +   E+R    QIV++ ATD D G NA ITY I   
Sbjct: 1017 LTILVDVQDVNDNPPVFER-DEYAVNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDA 1075

Query: 94   --------------SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
                          S+  LH F I P SG I     L     ++Y + + ATD G  ++ 
Sbjct: 1076 GADNATAPAAAGGSSDVALH-FGIFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAH 1134

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                V V V   N   P F +  Y+  + E     S V  +    L  G
Sbjct: 1135 ARTRVLVRVLDANDNDPRFLRPQYEFRIEENLRRGSVVGAVAARDLDLG 1183



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVS-- 94
              + L+D NDN P+ P+   +   A        + +  A+D D G    + YS+   S  
Sbjct: 2852 FHLELHDENDNEPKFPLSEYVHFIAENEPVGSSVFQAHASDLDRGPFGALNYSLAPASGD 2911

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            ++    FR+D  SG++ +         ++Y + ++A+D GGK ++  V V  V   +  +
Sbjct: 2912 DSSWKLFRVDSHSGMVSSAAVFDFEQRQRYDMELRASDMGGKGARVAVRVE-VDSRDEFA 2970

Query: 153  PVFQQNTYDVNVSEGASI 170
            P F + TY   +   A++
Sbjct: 2971 PQFSERTYRFVLPAAAAL 2988



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 31/201 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIP 57
            LVV++  LDR+     +FR ++  R    TA++ P    V++ + + D+NDNAP  P   
Sbjct: 1440 LVVARL-LDREVQ--AEFRLEI--RALDTTASNNPQSSAVTVKIEVADVNDNAPHWPR-D 1493

Query: 58   PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI---YHVSNTGLHK----FRIDPRS 107
            P++++  EA      +    ATD D G N E+ Y +   + + N    +    F +D  +
Sbjct: 1494 PVELRLSEATAVGAVVHNFTATDADTGTNGELQYRLLRYFPLLNETQEQAAPVFAVDSLT 1553

Query: 108  GVIETTGKLI--AGEQYSITVQATDTGGKSSQTI-----VEVSVVP----GPNTRSPVFQ 156
            G +     L   A ++Y++ VQA D    +S+ +     V + V+      P   SP+ +
Sbjct: 1554 GSLSLQAPLDFEAVQEYTLIVQALDQSSNASERLQTSVTVRLRVLDANDNAPEFVSPLAK 1613

Query: 157  QNTYDVNVSEGASINSTVATI 177
              +  V +S+   I  TVA +
Sbjct: 1614 GGSASVFLSDATRIGETVAHV 1634



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 29/181 (16%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEA---------- 66
            +++ +VIA +    A +   +LTV +ND NDNAP  L   PP       A          
Sbjct: 2504 EYQLEVIASDAAHEART---TLTVRVNDENDNAPVFLAQQPPAYFAILPAVAEVADSLSM 2560

Query: 67   RRQIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGE 120
              +++ + ATD D  G N++I YSI    +  +  F +   SGV+      +     A  
Sbjct: 2561 DLELLSVNATDADAEGSNSKIRYSI----DPPVEGFSVGASSGVVSVNMSRLQIPESASG 2616

Query: 121  QYSITVQATDTGGKSS---QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             Y + + A D GGK S    T++ V      + RS  FQQ  Y   +SE A + S V  +
Sbjct: 2617 DYFVRILARD-GGKHSLFGATLLRVQASDSGSARSQ-FQQTQYRAQISEAAPLGSVVLQL 2674

Query: 178  T 178
            +
Sbjct: 2675 S 2675



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 14/143 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  +++  ++A +    AA     + V + D NDN PR  + P  + +  E  R
Sbjct: 1111 LDRETRD--RYQLVILATDNGTPAAHARTRVLVRVLDANDNDPRF-LRPQYEFRIEENLR 1167

Query: 69   Q---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
            +   +  + A D DLG NA + YS+   +++    F++ P +G I T   L    +  Y 
Sbjct: 1168 RGSVVGAVAARDLDLGENAAVRYSLLPANSS----FQVHPVTGEISTREPLDRELRALYD 1223

Query: 124  ITVQATDTGG--KSSQTIVEVSV 144
            + V+A D G   +S++  V V V
Sbjct: 1224 LVVEARDQGTPVRSARAPVRVHV 1246



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 269 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDAEENGLVEYAIN 325

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDP++G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 326 RRQSDKEQMFRIDPQTGAIFINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 385

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 386 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 420


>gi|432922377|ref|XP_004080322.1| PREDICTED: protocadherin-15-like [Oryzias latipes]
          Length = 2269

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKI 73
           + F ++A +  G   S PV++TV++ D NDN P    +         +  GE    ++++
Sbjct: 501 YTFTLLASD--GVQQSAPVTVTVSVLDANDNTPTFSNVSYTINLFTNMMPGET---VLQL 555

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDT 131
            A D D G N EI+Y I      GL KF +D  SG+I      +L  G++Y++TV+A D 
Sbjct: 556 TAVDPDAGQNGEISYRILA---GGLGKFHLDSSSGIITVAPGVQLTVGQRYALTVEAMDN 612

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           G     +SS T V + V+P  N   P F +  Y++ +SE     +T+  +
Sbjct: 613 GPAPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNLEISEAMRTEATLLNL 662



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 14/142 (9%)

Query: 43  LNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + D+NDN P      P+ +   E      + +++ATD DLG N ++ Y + +        
Sbjct: 731 VTDVNDNDPVFNSSLPVNLSVTEEENHAFVGQVKATDPDLGANGQVHYQLINYQTL---- 786

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
           F I+  SG I T   L   + G  Y + V+A+D     + S+  + V+V+   +  SPVF
Sbjct: 787 FSIN-ASGFITTAVPLDREVKG-HYGLVVEASDGAVDPRRSRLTLNVTVL-DVDDNSPVF 843

Query: 156 QQNTYDVNVSEGASINSTVATI 177
            Q +Y VN+ E +  ++ +  +
Sbjct: 844 SQQSYHVNLPENSPKDTVILQL 865


>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
          Length = 2470

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 11/184 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           ++++E LDR+  +  +   +  AR++   + +  VSL V + D+NDN+P +  P    + 
Sbjct: 287 IITREPLDRETKSVHELVLE--ARDQGTPSRAARVSLKVTVLDVNDNSPEIVDPQGDVVS 344

Query: 61  IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
           ++  +    ++ ++ A D DLG NA +TYSI    ++ G + F IDP +G+I T   L  
Sbjct: 345 VREEQPPGTEVARVRAMDMDLGENASVTYSIPKDRDSDGYNVFTIDPITGMIRTKAVLDH 404

Query: 119 GEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E+  Y ++++ATD G   + S+ ++ V V+   + R P F  ++   NV E ASI   V
Sbjct: 405 EERNVYRVSIRATDAGHPPRHSERVLRVEVLALADNR-PTFTSSSLTFNVREDASIGHAV 463

Query: 175 ATIT 178
            +++
Sbjct: 464 GSVS 467



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQ 60
            LDR+      + F V+A +         S+PV + ++  DINDNAP     P     PI 
Sbjct: 1044 LDRE--RQSNYTFLVVATDSGMYDAKRTSIPVEIIIS--DINDNAPIFEEYPFRTRVPIS 1099

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             + G+    I+++ A D D GVN +I YS+  ++     KFRI P +G +  +  L    
Sbjct: 1100 TKPGQ---NILRVSAKDADDGVNGDIVYSL--INEQEKPKFRIHPSTGEVTASLSLSQDN 1154

Query: 119  GEQYSITVQATDTGG--KSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSEGASINSTVA 175
            G+ Y + V A D G   K ++ ++E+ V    + T S  FQ +TY+V + E +++ + + 
Sbjct: 1155 GKTYYLEVLAQDKGNPPKCAKGLIELQVGHLADLTPSLKFQNDTYNVVIQENSAVGTEII 1214

Query: 176  TITVSR 181
             IT  R
Sbjct: 1215 KITAVR 1220



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 11/182 (6%)

Query: 13   PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI--PPIQIQAGEARRQI 70
            P    +    VIAR ++   A V V   + ++D+NDN P    I      ++       +
Sbjct: 1297 PRESSRHILNVIARSQEVLEAYVKV--IIRISDVNDNPPIFTQIQYSATVLEGNTKGDFV 1354

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG--EQYSITVQ 127
            VK+ A+D D G+N+ I Y I  V     + F I  P SG++ T   L     E+Y +T+ 
Sbjct: 1355 VKLSASDADQGLNSRILYHI--VDGNPDNAFTISPPYSGIVRTNIVLDREIREKYRLTII 1412

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            ATD G         +SV V   N   P F +++  ++VSEG ++ + + TIT + + S  
Sbjct: 1413 ATDQGNPQLTGTAALSVRVIDINDNQPTFPKHSI-ISVSEGTAMGTVLTTITANDVDSSP 1471

Query: 187  AI 188
            A+
Sbjct: 1472 AL 1473



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 47/195 (24%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------- 55
            V+S  NLDR+  N  K+   + A+++   +     +LTV + DINDNAP           
Sbjct: 916  VLSMLNLDRE--NVPKYVLTISAKDRGRPSREAYCNLTVIVLDINDNAPSFVQNLNSGFL 973

Query: 56   ---------------------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
                                 +PP           ++ ++A D D GVN +ITY+I   +
Sbjct: 974  YGSNYPANYYPSKYMTTISEDVPP--------DSSVMSVKAIDPDQGVNGKITYAIAEET 1025

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPN 149
            +     FR+D  +GV+ T G L    Q  Y+  V ATD+G    K +   VE+ ++   N
Sbjct: 1026 S---WLFRVDNLTGVVTTAGPLDRERQSNYTFLVVATDSGMYDAKRTSIPVEI-IISDIN 1081

Query: 150  TRSPVFQQNTYDVNV 164
              +P+F++  +   V
Sbjct: 1082 DNAPIFEEYPFRTRV 1096



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 12/165 (7%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEAT 76
           R  ++     G   S  +SL+V + D+NDN P         ++  E  R   QI+++ A 
Sbjct: 97  RHGLLISALDGAGLSANLSLSVEVQDVNDNPPVFER-NEYHVEVPEGARLDSQILQVTAV 155

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK 134
           D D G NA ++Y +      G   FRI P +G I     L     +++++TV A D G  
Sbjct: 156 DLDTGNNARLSYRL-----QGSTAFRISPNTGWIYLAQSLDREILDRHTLTVLAIDNGSP 210

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           ++     V V V   N   P F+++ Y   + E     + V +++
Sbjct: 211 AATASASVLVMVLDDNDNDPRFEKDFYGFELLENLPSGTVVGSVS 255



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSIYHVSN 95
           L + + D+NDNAP       ++I   E+    V +    ATD D+     I Y +   SN
Sbjct: 14  LEMIVEDVNDNAPSF-RTNTVRISVPESHPLHVPLYVAHATDPDITPLLPIRYILGQNSN 72

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
              + F ID R+G +    +L    Q  + + + A D  G S+   + V V    N   P
Sbjct: 73  ---NLFGIDERTGELYLAKRLDYETQQRHGLLISALDGAGLSANLSLSVEV-QDVNDNPP 128

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF++N Y V V EGA ++S +  +T   L +G
Sbjct: 129 VFERNEYHVEVPEGARLDSQILQVTAVDLDTG 160



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVS 94
            SL V L D+NDN+P+ P+   ++   GE       +    A+D D G+   + YSI   +
Sbjct: 1834 SLRVYLEDVNDNSPKFPVSEYLEF-VGENEPIGTVVFSARASDLDRGIFGSLNYSIISAA 1892

Query: 95   NTGLHKFRIDPRSGVIETTGKLIA--------GEQYSITVQATDTGGKSSQTIVEVSVVP 146
             +G        +   ++ TG +I           +Y+ T++ATD GG+++   V V +  
Sbjct: 1893 -SGFSDIDDSWKLFAVDETGTVITRAVFDYEQRNRYAFTLRATDAGGRTAAVRVRVEI-- 1949

Query: 147  GPNTRSPVFQQNT 159
              ++R   F Q T
Sbjct: 1950 --DSRDEFFPQFT 1960



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 1406 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPKHSIISVSEGTAMGTVLTT-ITA 1464

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  +TY    +S+     F ID   G +    +L A    +Y++ V A+D G   
Sbjct: 1465 NDVDSSPALTYRFDDMSSG---PFSIDRYGGKVVLRKRLDAEMRSEYTLRVIASD-GIHE 1520

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            + T + V V    N  +P F+Q  Y   +SEG
Sbjct: 1521 ATTDLTVRVT-DLNDNTPQFKQAVYVAVLSEG 1551



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 12/162 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           +V   +LDR+  N  ++  Q+ A +    G   S+ VS+ + + D NDN P  P  P I 
Sbjct: 500 LVVAHSLDRE--NVSEYHLQIRALDTTSLGNPQSIAVSVKIIIEDANDNPPSWPQDPIIV 557

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +  +       I  + A+D D G+N E+ Y +          F +D  +G +    +L  
Sbjct: 558 LVSETTAIGSTIYNLTASDLDSGLNGELRYGLV-AEFPAKGCFTVDSLTGALTLAKQLDR 616

Query: 119 GE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
            E  Q+++ ++A+D    G + + T+    +V   N   PVF
Sbjct: 617 EEIMQHTLILKASDRALPGEQLASTVTAKIIVLDENDNDPVF 658



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 14/176 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-GEARRQIVKIEAT 76
            ++  +VIA +    A +    LTV + D+NDN P+      + + + G+ +++I+ + AT
Sbjct: 1507 EYTLRVIASDGIHEATT---DLTVRVTDLNDNTPQFKQAVYVAVLSEGQGKQEILTVNAT 1563

Query: 77   DNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG---EQYSITVQATDTG 132
            D+DL   N+ + Y +       +  F +DP +GV+      I+    ++  + + A D G
Sbjct: 1564 DDDLSEENSRVRYYLLR----PVKGFSVDPVTGVLTVNHTAISRPIPKEMDLAIVAEDHG 1619

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
              ++ ++   SVV   ++   V     Y+  V E     +T+  ++   L  G  I
Sbjct: 1620 KPAASSV--CSVVVRFSSLKSVLPGREYNFMVKENVPKGTTLMKLSDVDLLDGAII 1673



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 15/162 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQ 60
           V  ++ LDR+      +   ++AR  +    +   +L V + D NDN+P  R      + 
Sbjct: 815 VTLRDLLDRE--EVSHYSVSILARSNKLLDVT---TLEVIVMDENDNSPEFRPGSCYTLA 869

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           +   +    I  I ATD D G N EI YSI    N G  KF ++P +GV+      +  E
Sbjct: 870 VPENQETSVIHVIAATDLDDGKNGEIFYSI-ESGNIG-AKFVLNPSTGVLSMLN--LDRE 925

Query: 121 ---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
              +Y +T+ A D G  S +    ++V V   N  +P F QN
Sbjct: 926 NVPKYVLTISAKDRGRPSREAYCNLTVIVLDINDNAPSFVQN 967


>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
          Length = 3415

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 17/187 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
            +++KE LDR+    G     + AR+ QGT   AA VP+ +TV   D+NDN+P +  P   
Sbjct: 1193 IITKEPLDRE--TKGVHELVLEARD-QGTPSRAARVPLKITVL--DVNDNSPEIVDPQGD 1247

Query: 58   PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
             + ++  +    ++ ++ A D DLG NA +TY+I    ++ G + F IDP +G+I T   
Sbjct: 1248 VVSVREEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAV 1307

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   E+  Y ++V+ATD G     +I  + V V+   + R P F  ++   NV E ASI 
Sbjct: 1308 LDHEERNVYRVSVKATDAGRPPRHSIRALRVEVLALADNR-PTFTSSSLTFNVREDASIG 1366

Query: 172  STVATIT 178
              V +++
Sbjct: 1367 QAVGSVS 1373



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 18/184 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG 64
            LDR+      ++F V+A +       ++++PV + V+  D+NDNAP     P   ++  G
Sbjct: 1972 LDRE--RQSSYKFLVVATDSGKYDARSSTIPVEIRVS--DVNDNAPVFEEYPFRARVSIG 2027

Query: 65   -EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQ 121
             +  + IV++ ATD D G+N EI YS  H       KFRI P +G +     L    G+ 
Sbjct: 2028 TQPEKNIVRVVATDIDEGLNGEIVYSFLHEQEK--PKFRIHPSTGAVTAALSLSQDNGKT 2085

Query: 122  YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASINSTVATI 177
            Y + V A D G   +S++ ++E+ V    +  +PV  FQ  TY+V V E  +  + V  +
Sbjct: 2086 YHLEVVARDKGNPPRSARGLIELRVGDLADL-APVLKFQNETYEVVVGENCAAGTEVIRV 2144

Query: 178  TVSR 181
            T  R
Sbjct: 2145 TAVR 2148



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 10/150 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D+NDN P  P    ++I   E+      +    ATD D+  +  I Y++   SN  
Sbjct: 922  LNVEDVNDNGPTFPT-SSVRISVAESHPLHAPLYVAHATDPDVVPSHPIRYALGQNSN-- 978

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F ID RSG +  + +L    Q  + + ++A D GG S+   + V V    N   PVF
Sbjct: 979  -DLFGIDARSGELYLSRRLDYETQQRHGLLIRALDGGGLSANLSLSVEV-QDVNDNPPVF 1036

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
            ++N Y V V EGA ++S +  +T   L +G
Sbjct: 1037 ERNEYHVEVPEGAKLDSQILQVTAVDLDTG 1066



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 16/145 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V L D+NDN+P+ P +P      GE       +    A+D D G+   + YSI   + 
Sbjct: 2771 LRVRLEDVNDNSPKFP-VPEYLEFVGENEPVGTTVFSARASDLDRGIFGALNYSIVSAAA 2829

Query: 96   TGLHK-------FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
            TG          F +D +SG + TT  +   E   +Y+ T++ATDTGG+++   V V  +
Sbjct: 2830 TGFSDIDDSWRLFAVDGKSGTV-TTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVE-I 2887

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   P F +  Y   +  GA I
Sbjct: 2888 ESRDEFYPQFTERMYRFGMRSGARI 2912



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 63/235 (26%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
            +S  NLDR+  +  K+   + A++K   +     +LTV + D+NDNAP       +Q Q 
Sbjct: 1823 LSMSNLDRE--SVSKYALTISAKDKGRPSLEARCNLTVIVLDVNDNAPTF-----VQNQY 1875

Query: 64   GEAR-----------------------------------------------RQIVKIEAT 76
             E+R                                                 ++ + AT
Sbjct: 1876 AESRPRGGSSVPGTADYPAFGFPYGSSSNYPTSSHHPAKYVATVSEDVAPDSSVMTVRAT 1935

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
            D D GVN +ITY+I   ++     FR+D  +GV+ T G L    Q  Y   V ATD+G  
Sbjct: 1936 DPDQGVNGKITYAIAEETS---WLFRVDNLTGVVTTAGPLDRERQSSYKFLVVATDSGKY 1992

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
              +SS   VE+  V   N  +PVF++  +   VS G      +  +  + +  G 
Sbjct: 1993 DARSSTIPVEIR-VSDVNDNAPVFEEYPFRARVSIGTQPEKNIVRVVATDIDEGL 2046



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 20/171 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKI 73
            R  ++ R   G   S  +SL+V + D+NDN P          +P    +  +   QI+++
Sbjct: 1003 RHGLLIRALDGGGLSANLSLSVEVQDVNDNPPVFERNEYHVEVP----EGAKLDSQILQV 1058

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A D D G NA ++Y +      G   FRI P +G I     L   + +++++TV ATD 
Sbjct: 1059 TAVDLDTGNNARLSYRL-----QGSTAFRISPNTGWIYLAQVLDRESSDRHALTVLATDN 1113

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G    ++ T V V+V+   N   P F++  Y   + E     + V +++ S
Sbjct: 1114 GSPAATASTSVLVTVL-DDNDNDPRFEKEFYGFELLENLPSGTLVGSVSAS 1163



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 23/196 (11%)

Query: 13   PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--------G 64
            P    K    V AR          V L V ++D+NDN       PPI  Q         G
Sbjct: 2227 PRESSKHVLTVAARTAGPDPLEAYVKLVVKVSDVNDN-------PPIFTQTQYSATVLEG 2279

Query: 65   EARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG--E 120
              +   +VK+ A+D D G+N  I Y I  V     + F I  P SG++ T   L     E
Sbjct: 2280 NVKGDFVVKLSASDADQGMNGRILYHI--VDGNPDNAFTISPPYSGIVRTNIVLDREIRE 2337

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +Y +T+ ATD G         +SV V   N   P F +++  ++VSEG ++ + + TIT 
Sbjct: 2338 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPEHSI-ISVSEGTAVGTVLTTITA 2396

Query: 180  SRLASGCAIMNKEENS 195
            + + S  A+  +  N+
Sbjct: 2397 NDVDSSPALTYRFGNA 2412



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 21/187 (11%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAP-----RLPMIPPIQ 60
           +LDR+     + R+ ++     G A  +   L VN+   D+NDN P     R     P  
Sbjct: 179 SLDRE----ARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASVPEN 234

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
              G     ++ + ATD+D G N  I YSI    +     FRIDP +G++     L   +
Sbjct: 235 ATVGTP---VLAVNATDSDAGENGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFES 291

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINST 173
            E++ + + A D G +  +    +SV V   N   P    +F  +     +SE A     
Sbjct: 292 KERHELVIVARDRGAQPLEASAFLSVRVTDVNDNQPAITVIFLSDDATPKISESAQPGEF 351

Query: 174 VATITVS 180
           VA I+VS
Sbjct: 352 VARISVS 358



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 2338 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPEHSIISVSEGTAVGTVLTT-ITA 2396

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  +TY   + ++ G   F ID   G +    +L A    +YS+ V A+D  G  
Sbjct: 2397 NDVDSSPALTYRFGNATDPG--PFSIDRYGGKVVLRRRLDAETRSEYSLQVIASD--GIH 2452

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              T   +  V   N  +P FQQ+ Y   + EG
Sbjct: 2453 EATTDLIVRVTDLNDNAPRFQQSAYIATLPEG 2484



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP 58
           YLVV +  LDR+      +   V A +          +  + + D+NDNAP+        
Sbjct: 390 YLVVVERPLDRE--EKPVYDLSVEATDAGTPPLRAVRTFRLIVTDVNDNAPKFARDRYEA 447

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++A E    ++K+ ATD D G N+ I YS+ + +      F ID  SG+I T   +  
Sbjct: 448 HLLEASEPGTPVLKVTATDLDEGANSAIKYSLLNST-----WFTIDETSGLISTQTHVDC 502

Query: 119 GEQYS--ITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
               +  + V ATD+G    SS   V V+ V   N   P+F++  Y+  V E
Sbjct: 503 EADPAPILVVIATDSGRPPLSSSATVRVT-VHDLNDNEPIFEKPLYNATVPE 553



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D NDN+P  R      + +   +    I  I A D D G N EI YSI    N
Sbjct: 1751 TLEVLVMDENDNSPEFRPGSCYTLAVPENQGTAVIHTIAAADLDEGKNGEIYYSIVG-GN 1809

Query: 96   TGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             G  KF +DP SG +  +     +  +Y++T+ A D G  S +    ++V V   N  +P
Sbjct: 1810 IGA-KFALDPTSGALSMSNLDRESVSKYALTISAKDKGRPSLEARCNLTVIVLDVNDNAP 1868

Query: 154  VFQQNTYDVNVSEGAS 169
             F QN Y  +   G S
Sbjct: 1869 TFVQNQYAESRPRGGS 1884



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +V   +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDN PR P   PI 
Sbjct: 1406 LVVAHSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIAIEDANDNPPRWPQ-DPIT 1462

Query: 61   IQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            ++  E       I  + A D D G+N ++ Y +          F +D  +G +     L 
Sbjct: 1463 VRVSERAAIGSTIYNLTAVDLDSGLNGDLRYGLV-AEFPPRDSFAVDSLTGALTLAKPLD 1521

Query: 118  AGE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
              E  +Y++ ++A+D    G + + T+    +V   N   P+F
Sbjct: 1522 REERAEYTLILKASDRAPPGERLASTVTARIIVLDQNDNDPIF 1564



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLPM-I 56
            L++SK  LDR+  +  K+  ++ +R++  T  S+    PV++ V + D NDN PR    +
Sbjct: 2624 LILSKP-LDRETRD--KYVLRLGSRDENSTTGSLVGDEPVTVIVTVEDANDNYPRFSEDV 2680

Query: 57   PPIQIQAGEARRQIVKI-EATDNDLG--VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              + I+   AR   V +  A D+DL     A + Y I   ++ GL  FR+D  +G +   
Sbjct: 2681 HQVSIKENAARGATVAVLRAKDDDLAGTAAANLVYEITSGNDGGL--FRVDRATGAVLVN 2738

Query: 114  GKL---IAGEQYSITVQATDTGGKS-----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
              L   +  + +++ V A DT   +     ++  V +  V   N  SP F    Y   V 
Sbjct: 2739 ATLDCDLEPDVHNLVVMACDTDPATPLCALTRLRVRLEDV---NDNSPKFPVPEYLEFVG 2795

Query: 166  EGASINSTVATITVSRLASG 185
            E   + +TV +   S L  G
Sbjct: 2796 ENEPVGTTVFSARASDLDRG 2815



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI 59
            VV +  LD +     ++  QVIA +    A +    L V + D+NDNAPR      I  +
Sbjct: 2427 VVLRRRLDAE--TRSEYSLQVIASDGIHEATT---DLIVRVTDLNDNAPRFQQSAYIATL 2481

Query: 60   QIQAGEARRQIVKIEATDNDLGV-NAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                G   ++IV + ATD+DL   N+ + Y +   +      F + P SGV+
Sbjct: 2482 PEGRGGELQEIVTVNATDDDLTEDNSRVRYHLLRATK----GFSVHPASGVV 2529



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)

Query: 41  VNLNDINDNAPRL-PMIPPIQIQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V + D+NDN P   P    + ++   + +  I+++ ATD D G+  ++ Y I   +  G+
Sbjct: 663 VQVTDVNDNRPIFEPRRYNVTLRTDSSFQGAILRVVATDLDAGLFGQVAYRITSGNEAGV 722

Query: 99  HKFRIDPRSGVIETT--GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVP-GPNTRSPVF 155
             F+ID  +G +E      L     + + V ATD  G  S    E+ +    P  R    
Sbjct: 723 --FQIDRNTGEMEVARPAFLSRSPFHQLNVTATDAAGLKSMHDAEIRITASSPGHRIASC 780

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           ++  Y + V E    NS V  +
Sbjct: 781 EKPRYTITVKETVPQNSVVGGV 802


>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
          Length = 4591

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2551 ILTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2608

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA++TY+I   S++      I+  SGVI T   LI   
Sbjct: 2609 GSSAAKGTSVIKVLASDADEGSNADVTYAIEADSDSVKENLEINKLSGVITTKESLIGLE 2668

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P T+ P F +  Y   VSE   I + +  I
Sbjct: 2669 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPETQLPKFSEPFYTYTVSEDVPIGTEIDVI 2728



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3218 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3272

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +T++ATD G  S   +  V+V V   N
Sbjct: 3273 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVN 3332

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   VSE A +  +V T+
Sbjct: 3333 DNAPVFSQDTYTAVVSEDAVLEQSVITV 3360



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 IIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D DL  N ++ Y I   +  G   F + P++G+I TT + +  
Sbjct: 1148 ILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGF--FAVHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 19/192 (9%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2979 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3033

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I A D D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3034 TIPEDVLPG---KLIMQISAADADIRSNAEITYTLL---GSGAEKFQLNPDTGELKTSAP 3087

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E     + 
Sbjct: 3088 LDREEQAVYHLLVRATDRGGRFCQASI-VLALEDVNDNAPEFSADPYAITVFENTEPGTL 3146

Query: 174  VATITVSRLASG 185
            +  +  +   SG
Sbjct: 3147 LTRVQATDADSG 3158



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 8/153 (5%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH--VS 94
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI      
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGIFG 1607

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            N G + F IDP  G I+T  +L    Q  Y + V+ATD G      +  V + V   +  
Sbjct: 1608 NIG-NSFMIDPVLGSIKTAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNA 1666

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             P F    Y V +SE  SI S V  +T    +S
Sbjct: 1667 PPKFTSKDYSVEISETVSIGSFVGMVTAHSQSS 1699



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   + A +    + S   ++ VN+ D+NDNAP         + + +A
Sbjct: 3294 ENLDYESSH--EYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDA 3351

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI   +  G   F IDP  G ++ T KL+  E    
Sbjct: 3352 VLEQSVITVLADDADGPSNSHIHYSIIDGNQGG--PFTIDPVRGEVKVT-KLLDRETISG 3408

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3409 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLRLVVT 3468



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR  Q      ASV VS+ V   D NDN+P     P     ++      ++++I
Sbjct: 2777 YQFSILARCTQDDREMVASVDVSIQVK--DANDNSPVFESSPYEAFIVENLPGGSRVIQI 2834

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N+++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2835 RASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKVVASD 2894

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2895 HGEKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2932



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R           S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3096 YHLLVRATDRGGRFCQASIVLALEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3155

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3156 DSGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3212

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3213 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3255



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2377 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2430

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2431 SI--LSGNDHKHFIIDSATGIITLSNLRRHTLKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2487

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2488 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2525



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 LDVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQ---TIVEVSVVPGPN 149
           T   KF ID  +GV++ T  L   +  E Y + ++A D   +  Q   T+V    +   N
Sbjct: 863 TDTDKFSIDSATGVVKITHPLDRELQHEHY-LKIEARDQAREEPQLFSTVVLKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLM---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVERGAVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDNAP            +A      +V++ ATD D   N  I+Y
Sbjct: 2264 TGAHAEVFVDIIVEDINDNAPVFAQQSYAATLSEASVIGTSVVQVRATDADSEPNRGISY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSV 144
             +    +     F +D  +G+I     L     ++++I V+A D G    SS  IV V V
Sbjct: 2324 QLSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDV 2383

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
                N   P+F+Q  Y+  +SE A
Sbjct: 2384 T-DLNDNPPLFEQQIYEARISEHA 2406



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1708 NTG-DAFDINPHSGSI-ITQKALDFETLPVYTLIIQGTNMAGLSTNTTVSVQL-QDENDN 1764

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            SPVF Q  Y   +SE ASINS V T
Sbjct: 1765 SPVFMQAEYTGLISESASINSVVLT 1789



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+  ++TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2514 VMEVKTTDGDSGIYGDVTYHI--VNDFAKDRFYINER-GQILTLEKLDRETPAEKVISVR 2570

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2571 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2629



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +G+IET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGIIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E  R I  + A D D G N E+ Y +  +H       
Sbjct: 2076 DQNDNAPVFVNLPYYAVVKVDT-EVGRVIRHVTAVDRDSGRNGEVHYYLKEHH------E 2128

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ +V ++V+   N   PV
Sbjct: 2129 YFQIGPL-GEISLKKQFEPDTLNKEYLVTVVAKDGGNPAFSAEVMVPITVM---NKAMPV 2184

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2185 FEKPFYSAEIAENVQVHSPVVHV 2207



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P    P+     +    
Sbjct: 1837 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPLYEASLLLPTY 1896

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1897 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1954

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q  Y   V E ++   T+A IT
Sbjct: 1955 VRASD-GRFAGLTSVKINVKESKESHLK-FTQGVYSAVVKENSTEAKTLAVIT 2005



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  +++V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I+ I A D D     E    IY +  +     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILHISAVDQD-----EKNRLIYTLQGSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
           LTV++   N+ AP   +I  + +   E  R     IV ++  D D G N EI  S+  V+
Sbjct: 243 LTVHIEQANECAP---VITAVTLSPSELDRDPTYAIVTVD--DCDQGANGEIA-SLSIVA 296

Query: 95  NTGLHKFR-IDPRSGVIETTGKLIAGEQ-------YSITVQATDTGGKSSQTIVEVSVVP 146
              L +FR +    G  E   K I+G         Y++T+QA D G     + V+V  V 
Sbjct: 297 GDLLQQFRTVRSFPGSKEYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQFSSVKVIHVT 356

Query: 147 GPNTRS-PV-FQQNTYDVNVSEGASINSTVATI 177
            P  ++ PV F+++ Y   +SE A  N+ V  +
Sbjct: 357 SPQFKAGPVKFEKDVYRAEISEFAPPNTPVVMV 389



 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N  +PVF 
Sbjct: 2229 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVEDINDNAPVFA 2287

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y   +SE + I ++V  +
Sbjct: 2288 QQSYAATLSEASVIGTSVVQV 2308


>gi|432878322|ref|XP_004073300.1| PREDICTED: protocadherin-11 X-linked-like [Oryzias latipes]
          Length = 1306

 Score = 72.4 bits (176), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           ++  +++A ++     +    + + + D NDNAP  P  P IQ+   E      Q++KI 
Sbjct: 431 EYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQ-PEIQLSIPENNDPSTQLIKIS 489

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
           ATD D G NAEI Y++   +  G H   ID RSG++    +L     E++S  V A D G
Sbjct: 490 ATDADSGSNAEIIYTLGPDAPDGFH---IDRRSGILSVGKRLDREKQERFSFIVIARDNG 546

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------ 185
               Q+ V V  +V   N  SP F    Y+  V E   +  TV  ITV+   +G      
Sbjct: 547 STPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAIT 606

Query: 186 CAIMNKEEN 194
            +I+N ++N
Sbjct: 607 LSILNGKDN 615



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 13/155 (8%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE- 65
           + LDR+     +F F VIAR+   T     V++ + + D+NDN+P     P       E 
Sbjct: 526 KRLDRE--KQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTH-PEYNFYVPEN 582

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                 +  I  TD D G NA IT SI +    G   F IDP++GVI+        +Q  
Sbjct: 583 LPLYGTVGLITVTDADAGDNAAITLSILN----GKDNFIIDPQTGVIKPNITFDREQQSS 638

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
           Y+  V+A D G   + +  +V++ V   N   PVF
Sbjct: 639 YTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVF 673



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 20/192 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           ++ ++NLDR+  +   F  ++   +      S    L V ++D+NDN P      L +  
Sbjct: 201 LIVQQNLDREKRD--TFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVSV 258

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKL 116
           P     G +   + ++ ATD D G NA+I ++    +S++    F I+  +G+I     L
Sbjct: 259 PENAPTGTS---VAQLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPL 315

Query: 117 I--AGEQYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGA 168
                  + + V A+D G   S+  V V+V      VP  +TR  +   N   V +SE A
Sbjct: 316 DREVTPVHKLIVLASDGGSTPSRATVIVNVTDVNDNVPAIDTRYIINLVNG-TVLLSENA 374

Query: 169 SINSTVATITVS 180
            +N+ +A ITV+
Sbjct: 375 PLNTKIALITVT 386



 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 18/148 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           V K N+  D      + F V A +      S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 64  GEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNT-------GLHKFRIDPRSGVI 110
              R        + ++ A DND G+NAE+ YSI             GL  F ID  SG I
Sbjct: 683 DLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGL--FTIDKISGNI 740

Query: 111 ETTGKLIAGE--QYSITVQATDTGGKSS 136
               K++  +   + + V+  D G   S
Sbjct: 741 TLQEKIVGADLGLHRLVVKVRDLGQPES 768


>gi|426252195|ref|XP_004019801.1| PREDICTED: protocadherin Fat 3 [Ovis aries]
          Length = 4477

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V + E LDR+ P  G     +  R   G   +    + V + D NDNAP+   +     +
Sbjct: 2551 VTTTERLDRENPLEGDI--SIFLRALDGGGRTTFCMVRVIVVDENDNAPQFLTVEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G NA ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQAMDPDDGANARITYSLYSEASVSVADLLEIDPDNGWMVTKGHFNQL 2668

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE A+I STV 
Sbjct: 2669 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETSVPSFTQSQYSFTVSEDAAIGSTVD 2727

Query: 176  TITV 179
            T+ V
Sbjct: 2728 TVRV 2731



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    V+ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 VLYTAERLDHEAQD--KHILHVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1574 VFESAALGSAVLQVTALDKDKGENAELMYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+ +P F    Y   V+E   + ++V 
Sbjct: 1632 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNS-NPRFTHKDYQAEVNENVDVGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  +F IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1296 DGNDDG--RFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1354 PSPVPLTFDEPFYNFTVMENDRVTEIVGVVSV 1385



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 22/148 (14%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V ++D+NDN+P          LP   P       + + I+K+ A D D+G N +I YS+Y
Sbjct: 3016 VTVSDVNDNSPVCDQVAYTASLPEDVP-------SNKIILKVSAKDADIGPNGDIRYSLY 3068

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPN 149
                 G ++F +DP SG ++T   L       YS+  +ATD GG+  Q+ V ++ +   N
Sbjct: 3069 ---GPGNNEFFLDPDSGELKTLAPLDRERVPAYSLIARATDGGGRFCQSDVRLT-LEDVN 3124

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               PVF  + Y+  V E  +  + +  +
Sbjct: 3125 DNPPVFSSDHYNACVYENTATKALLTRV 3152



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            +VV +  LDR+  +    R +    +  G A S   ++++ + D+NDN P       L  
Sbjct: 3185 IVVLERPLDREQQSSYTLRVRA-TDQSPGRALSSLATVSITVLDVNDNPPVFERRDYLVS 3243

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I  +  
Sbjct: 3244 VP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVSEA 3297

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L   +  ++ + V+A D G  +   +  V + +   N   P F Q+ Y   +SE A +  
Sbjct: 3298 LDYESCRKFYLVVEARDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISEDALVGD 3357

Query: 173  TV 174
            +V
Sbjct: 3358 SV 3359



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA+D DLG N E+TYS+ 
Sbjct: 816 LTINVEDANDNSPIF-----IQDSYSVNILESSSIGTEIIQVEASDKDLGSNGEVTYSVL 870

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 871 ----TDTQQFAINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 926

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            ++ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2072 SIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2127 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILARDGGKPSLSTSVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +++ + +I
Sbjct: 2186 DKPFYTASVNEDIGMDTPILSI 2207



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + V + D+NDNAP    P+  P+ ++    
Sbjct: 1105 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYVEIEDVNDNAPLTSEPIYYPVVMENSPK 1162

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1163 DVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINVKTGLITTTSRKLDREQQAEHF 1220

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1221 LEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1264



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1837 NLDHEAI--AHFLFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1893

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1894 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTVKNNNLSKDHY 1950

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             + V+ +D  GK   T +   VV         F Q+ Y  ++SE
Sbjct: 1951 MLIVKVSD--GKFYSTSMVTIVVKEAMDSGLHFTQSFYSTSISE 1992



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YSLIARATDGGGRFCQSDVRLTLEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+GVN ++ YS+   +++    F +D  SG++     L   +Q  Y++ V+ATD   G++
Sbjct: 3158 DVGVNRKVVYSL---ADSADGFFSVDSSSGIVVLERPLDREQQSSYTLRVRATDQSPGRA 3214

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  VS+ V   N   PVF++  Y V+V E  S  + V  +
Sbjct: 3215 LSSLATVSITVLDVNDNPPVFERRDYLVSVPEDTSPGTQVLAV 3257



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1451 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 1508 FRIDPNTGVLYTAERLDHEAQDKHILHVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSAVLQVT 1588



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D G N  + Y
Sbjct: 2264 TGARAEVTIDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKMVHY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD G    SS+ +V + 
Sbjct: 2324 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHESVQHCTLKVRATDNGFPSLSSEVLVHI- 2381

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         + ++     
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSNYETVIMEGMPVG 2829

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLIAGEQ--YS 123
             ++ ++ A D D G N ++TYS++  +     +  F ID  +G I T   L       ++
Sbjct: 2830 TRLTQVRAMDVDWGANGQVTYSLHSDAQPEKVMEAFSIDSNTGWISTLKDLDHETDPVFT 2889

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V+V    N  +PVF    Y  NV E       VA ++
Sbjct: 2890 FSVVASDLGEAFSLSSTALVSVTVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 5/77 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI TT K++  E+   Y + VQAT+  G +S   V + +V   N  +PVF  
Sbjct: 1713 FTINPYSGVI-TTRKVLDYERTSSYQLIVQATNMAGMASNVTVSIQIV-DENDNAPVFLF 1770

Query: 158  NTYDVNVSEGASINSTV 174
            + Y  ++SE A INS V
Sbjct: 1771 SQYSGSLSEAAPINSIV 1787



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 884  IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 941

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 942  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSRELD 998

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 999  YEKQQFYNLTVRAKDKG 1015



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           ++   +N   PR     P  +   E       I+KI+A D D G N ++ ++I   S+  
Sbjct: 712 LDFYSVNRQGPRFDKSFPSDVAVKENLPVGANILKIKAYDADSGFNGKVLFTI---SDGN 768

Query: 98  LHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
           +   F ID  +G ++    +    +  Y + +   D G   KSS  ++ ++V    N  S
Sbjct: 769 MDSCFNIDMETGQLQVLMPMDREHRDLYLLNITIYDLGNPQKSSWRLLTINV-EDANDNS 827

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F Q++Y VN+ E +SI + +  +  S
Sbjct: 828 PIFIQDSYSVNILESSSIGTEIIQVEAS 855



 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1112

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV V +   N  +P+  +  Y
Sbjct: 1113 YWLTVYATDRGVVPLYSTIEVYVEIEDVNDNAPLTSEPIY 1152



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2361 LKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SG+I  +   K      YS+ V  +D G  +S
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 2514



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +++ + D+ND  P   P    + I +    R  + ++ ATD D+G N E     Y+    
Sbjct: 143 VSIQVLDMNDLRPLFSPTTYSVTIAENTPLRTSVAQVTATDADIGSNGE----FYYYFKN 198

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            +  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 199 KVELFSVHPTSGVISLSGRLNYDEKSRYDLEILAVDRGMK 238



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+++ D ND+ P     +      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 457 VTISIEDANDHTPEFQQLLYEAFVNESVPVGTSVLTVSASDKDKGENGYITYSI---ASL 513

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSV-VPGPNTR 151
               F I+  +G+I TT  L    + E Y   V+A+D G     ++ V V++ V   N  
Sbjct: 514 NALPFAINQFTGIISTTEDLDFESSPETYRFIVRASDWGSPYRHESEVNVTIRVGNVNDN 573

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 574 SPLFEK 579



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G+  +I+Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 2510 AGTKVIHVRATDGDPGMYGQISYAI--INDFAKDRFLID-GNGQVTTTERLDRENPLEGD 2566

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++  +V V VV   N  +P F    Y  +V
Sbjct: 2567 -ISIFLRALDGGGRTTFCMVRVIVV-DENDNAPQFLTVEYRASV 2608


>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
            rubripes]
          Length = 4583

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E+LDR+          +IAR+  G      VS  V L D+NDNAP+          
Sbjct: 2521 IFTLESLDRENNIEKVVPISLIARDGGGKVGFCVVS--VILTDVNDNAPQFRAADYKSTI 2578

Query: 63   AGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
            A +A R   +V+I A+D D G NA+I +SI          F I P SGVI T   LI   
Sbjct: 2579 ASDAPRGTSVVRIAASDTDEGSNADIEFSIEADVENVEENFEIHPTSGVIVTKESLIGLE 2638

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E Y+  V+A DTG     ++V+V + +  P T  P F +  Y   V+E   I + +  I
Sbjct: 2639 NELYAFFVRAKDTGNPPKHSVVQVYIRIVAPETPIPKFSEAQYRYTVAEDLPIGTEIDVI 2698



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 12/187 (6%)

Query: 3    VVSKEN-LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V+S E  LDR+      +  + +A ++     S    + +++ DINDN P          
Sbjct: 3155 VISLERPLDRELQ--ATYELRALASDQGSPRFSSVCLVVISVLDINDNPPVFEHREYTAT 3212

Query: 62   QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKL 116
             + +  A  Q+++++A   D   N EI+Y I   +  GL  F +DPRSG   VIE     
Sbjct: 3213 VSEDVTAGTQLLRVQAASRDTEANGEISYGIISGNEHGL--FSVDPRSGDVFVIEPL-DY 3269

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             A  +Y IT++ATD G      +  V++ +   N   PVF Q+ Y   VSE   +  TVA
Sbjct: 3270 EASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSEDTELGRTVA 3329

Query: 176  TITVSRL 182
            T+    L
Sbjct: 3330 TVNAEDL 3336



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 7/153 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + VN++D NDNAP     P      ++      ++++ A D D G NAEI YS+   S
Sbjct: 1519 VRVIVNVDDTNDNAPWFVGTPYSGRVFESAAVGSAVLQVTARDKDKGHNAEIAYSLE--S 1576

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
                + F IDP  G I    +L   +  QY +TV+A+D G     T   V + V   +  
Sbjct: 1577 GNFANTFAIDPVLGTITVAKELDRNSKAQYELTVKASDHGASPLSTTAAVHIEVTVSDNA 1636

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +P F +  +   VSE A   S V+ +T S  +S
Sbjct: 1637 APRFTEKDFSAEVSESAQPGSFVSLVTASSQSS 1669



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 13/189 (6%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
            + V  ++ LDR+  +   +   + A +   TA +   ++ V + D NDN+PR    +   
Sbjct: 2951 WKVFVRKPLDREEKD--NYLLNITASDGIFTAKA---TVEVKVLDANDNSPRCEKALYSE 3005

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               +   A R I+++ A+D D+  NA ITY +      G   F ID  +G ++T+  L  
Sbjct: 3006 SVPENSPAGRLILQVSASDADIRSNAHITYEL---QGAGSELFIIDSDTGELKTSQPLDR 3062

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             EQ  +  T++A D GG+  +  V VS V   N   P F  + Y   V E   I + VA 
Sbjct: 3063 EEQEEHRFTMRAVDGGGRYCEADVHVS-VEDVNDNPPQFSSDPYTFTVFENTEIGTYVAK 3121

Query: 177  ITVSRLASG 185
            +  S +  G
Sbjct: 3122 LLASDIDVG 3130



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 17/161 (10%)

Query: 32   AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            A S  V + V + D NDN P         +LP     + +    R  + ++ A+D D G 
Sbjct: 1195 AKSTTVRVIVQVLDENDNRPLFLEKIYKIKLPEREKPEKERATKRDPVYRVIASDRDDGP 1254

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIV 140
            NAEI+YSI      G  KF I+P++G++ +     AGE   +T++A D G   KSS   +
Sbjct: 1255 NAEISYSIEEGDENG--KFFIEPKTGLVSSKKFSSAGEYNILTIKAVDNGRPQKSSSCRL 1312

Query: 141  EVSVVPGPNTRSPV----FQQNTYDVNVSEGASINSTVATI 177
             +  +P P   S      F+++ +  +V E   +   V  +
Sbjct: 1313 HIEWIPKPKLPSDAALLQFEESPFVFSVMESDPVAHMVGVV 1353



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 15/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            V LT++L D+NDN P+   +PP  +++  E       I+ +EA D D+G ++++ YS+  
Sbjct: 882  VPLTISLEDVNDNPPKF--VPPNYRVKVREDLPIGTVIMWLEAHDPDIGPSSQVRYSL-- 937

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVP- 146
            V N   H F +D  SG +     L     + Y++T +A D G     SS   +EV VV  
Sbjct: 938  VDNGDGH-FEVDKLSGALRIVQNLDYETKQVYNLTAKAKDKGKPMSLSSTCFIEVHVVDV 996

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N   P+F+       + E A + ++V T+T
Sbjct: 997  NENLYRPLFRSFVEKGFIKEDAPVGTSVMTLT 1028



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 10/152 (6%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           ++L+ +N  AP+        I+  E      +IV + ATD D G N ++ Y I    NTG
Sbjct: 675 MDLHSVNRYAPQFAEAFANVIEVKEDLPVGARIVHLSATDADSGFNGKLVYVISG-GNTG 733

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            H F +D  SG ++    L   A + Y++ +   D G   KSS  ++ V ++   N  SP
Sbjct: 734 SH-FVVDMESGWLQVYSPLDREAVDSYTLNITVYDLGIPQKSSSRLLGVKILDA-NDNSP 791

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q++Y V +SEG  + + +  +  S    G
Sbjct: 792 QFLQDSYSVQISEGTPVGTEIIQVDSSDKDQG 823



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + L D+NDNAP   +    +    EA      I++++A D D G N ++ 
Sbjct: 2234 TGAHSEVFVDIILEDVNDNAPVF-LSKTYRANVSEASVIGMHILQVDAKDADTGNNQDVF 2292

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
            + +          F ID  +GVI T   L   E  Q+ + V+  D G    +S+ +V V 
Sbjct: 2293 FQLVEEKGRSSDLFTIDRDTGVISTAQVLDYEETQQHKLRVRXVDGGVPALTSEVLVTVD 2352

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N  +P F QNTY+  +SE A
Sbjct: 2353 VT-DLNDNAPEFTQNTYNSTISELA 2376



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 14/164 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEA 66
            LDR+     +F  + +     G        + V++ D+NDN P+    P      +  E 
Sbjct: 3060 LDREEQEEHRFTMRAV----DGGGRYCEADVHVSVEDVNDNPPQFSSDPYTFTVFENTEI 3115

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               + K+ A+D D+G+N++I YS+   S  G   F ID ++GVI     L    Q  Y +
Sbjct: 3116 GTYVAKLLASDIDVGLNSDIVYSLLD-SADGF--FSIDEQTGVISLERPLDRELQATYEL 3172

Query: 125  TVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
               A+D G    SS  +V +SV+   N   PVF+   Y   VSE
Sbjct: 3173 RALASDQGSPRFSSVCLVVISVL-DINDNPPVFEHREYTATVSE 3215



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V A ++     S  V + V + D+NDNAP+   P+  P  ++       I++I A 
Sbjct: 1076 YWLTVYAMDRGVVPLSTFVEVYVEVQDVNDNAPQTSEPVYYPSVMENSPKDVSIIQINAI 1135

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG 133
            D D   + +++Y I   +  G   F I+ R+G+I TT + +  EQ   + + +  TD G 
Sbjct: 1136 DPDTKASDKLSYRITSGNPQGF--FAINGRTGLITTTSRKLDREQQDEHILEITVTDHGV 1193

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             +  T V V V V   N   P+F +  Y + + E
Sbjct: 1194 PAKSTTVRVIVQVLDENDNRPLFLEKIYKIKLPE 1227



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 17/149 (11%)

Query: 37   VSLTVNLNDINDNAPR---LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V LTV + D NDN P    LP    +Q+ A E +  I ++ A D D+G NAEI Y +   
Sbjct: 2038 VLLTVTVEDANDNKPMFVDLPYHALVQMDAEEGQ-VIRQVTAVDRDIGQNAEIHYLL--- 2093

Query: 94   SNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGP 148
                   F+I P SG I    KL        + I V A D G    S++  V V+VV   
Sbjct: 2094 -KEDQEHFQISP-SGEISLKKKLEKESLNTDFFIVVVARDNGEPALSAEAEVPVTVV--- 2148

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   PVF++  Y + + E   +++ V  +
Sbjct: 2149 NKAMPVFEKAFYTIEIPENIQLHTPVLHV 2177



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
           R  + K+ ATD D+G N E  YS    S+     F + P SGV+  TGKL   E   Y +
Sbjct: 134 RTSVAKVTATDADIGTNGEYYYSFREWSDM----FAVHPTSGVVTLTGKLDFSETRLYEL 189

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 190 EILAVDRGMK 199



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 10/137 (7%)

Query: 39   LTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVS 94
            + V + D+NDN P     P   + ++   +  Q++++ A+D D G N  + YS+     S
Sbjct: 2768 INVQVKDVNDNKPAFESDPYEAVVVENLPSGTQVIQVRASDQDSGTNGHVVYSLDARQSS 2827

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ---TIVEVSVVPGPN 149
                  F ++  +G + T  +L     E+Y+I V ATD G +      T VEV+V    N
Sbjct: 2828 QEISELFAVNSETGWVTTLKELDREKMEKYTIGVLATDQGDRVQHVTGTRVEVTVA-DVN 2886

Query: 150  TRSPVFQQNTYDVNVSE 166
               P F    Y   VSE
Sbjct: 2887 DNPPRFTAEVYKGTVSE 2903



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           + A  K GT       + V++ D+N+NAP        +    E       ++ ++ATD+D
Sbjct: 410 ITADAKAGT------KVIVDVIDVNNNAPEFQQTS-YKTTVDENVPTGTSVLTVKATDHD 462

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGG-- 133
            G N  +TYSI   +N     F ID  +GVI TT +L+  E     Y++ V+A+D G   
Sbjct: 463 RGENGYVTYSI---TNMSPQPFAIDYFTGVI-TTSELLDYELMPRIYNLKVRASDWGSPY 518

Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +  +  V V+ +   N   P+F+    DV V     +   + T++
Sbjct: 519 RREVEAYVTVT-LNNLNDNKPLFENVDCDVTVPRDHGVGEQITTVS 563



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 26/141 (18%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVN 83
            P+SL+      V++ D+N+N  R P+     ++ G  +        ++ + A D D G +
Sbjct: 980  PMSLSSTCFIEVHVVDVNENLYR-PLFRSF-VEKGFIKEDAPVGTSVMTLTAEDEDKGRD 1037

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIV 140
             E+ YSI     +GL  F ID  +GVI T  +L+  E    Y +TV A D G     T V
Sbjct: 1038 GEVRYSIR--DGSGLGIFTIDEETGVIRTQ-ELLDHETTPHYWLTVYAMDRGVVPLSTFV 1094

Query: 141  EVSVV------PGPNTRSPVF 155
            EV V         P T  PV+
Sbjct: 1095 EVYVEVQDVNDNAPQTSEPVY 1115



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 6/171 (3%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LD +  N   F  QV         A    ++TV + D+ND  P     M     I     
Sbjct: 1808 LDYEQRNAFHFTVQVHDLGMPRLFAEAAANVTVEVIDVNDCPPVFSQKMYEATVIVPTYK 1867

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITV 126
              ++++I ATD+D   N+++  SI    N G  KFR+DP +G+I          +Y + V
Sbjct: 1868 GVEVIQINATDSDSRPNSKLLLSISE-GNIG-EKFRMDPATGMISVQNVTQLRSRYELKV 1925

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + +D G  +S   V++ V     +R   F + +Y   V E +S   T+  +
Sbjct: 1926 RVSD-GRFASVASVKIHVKENKESRLK-FTRESYRAFVQENSSERKTLEVV 1974



 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SGV+ T   L   A  QY++ +Q T+  G  + T + V +    N  +P+F Q 
Sbjct: 1683 FDINPNSGVVVTQRPLDYEATPQYTLIIQGTNMAGLGTNTTLLVHL-KDENDNAPIFTQK 1741

Query: 159  TYDVNVSEGASINSTVAT 176
             +   +SE A +NS V T
Sbjct: 1742 EFTGIISESAPVNSVVLT 1759



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPR-LPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDN+P+ L     +QI  G     +I++++++D D G N  + YSI      
Sbjct: 779 LGVKILDANDNSPQFLQDSYSVQISEGTPVGTEIIQVDSSDKDQGNNGVVLYSIL----G 834

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
           G   F ID  +GV+  T  L       Y + + A D      Q +  V +   +   N  
Sbjct: 835 GTDHFAIDANTGVVSVTKPLDRELHPVYVLKIAARDQAFNEPQLVSTVPLTISLEDVNDN 894

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
            P F    Y V V E   I + +  +
Sbjct: 895 PPKFVPPNYRVKVREDLPIGTVIMWL 920



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            ++++I A+D D     ++T+++   ++   L KFR+DP +G + T  KL      ++ +T
Sbjct: 1447 EVLQISASDRD--EKNKLTFTLLSSTDPFSLRKFRLDPGTGTLYTAEKLDHETMHRHILT 1504

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      + +V V V V   N  +P F    Y   V E A++ S V  +T
Sbjct: 1505 VMVRDQDIPVKRNLVRVIVNVDDTNDNAPWFVGTPYSGRVFESAAVGSAVLQVT 1558



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
            A +  V +TV++ D+NDNAP           +  A R   I +++A+D D     ++ + 
Sbjct: 2342 ALTSEVLVTVDVTDLNDNAPEFTQNTYNSTISELAPRGHFITQVQASDADSSDKDKLLF- 2400

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
             +   N  L+ F ID  +G I  +       Q  Y+++V  +D   + S  ++ V+V+ G
Sbjct: 2401 FFTSGNEDLN-FSIDKHTGAIIVSNHRRPNLQPFYNLSVSVSDGVFRGSAAVL-VTVI-G 2457

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVA 175
             N  +P F Q  Y V + E + + + VA
Sbjct: 2458 ANFHNPTFTQTEYVVELVENSPVGTLVA 2485



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVP 146
           Y+  + S    ++F I+P +G+I T G + A     I ++      K+ ++ IV+V  V 
Sbjct: 369 YAFKYKSGHNQNRFAINPDTGLISTAGPINADSTPQIELEVITADAKAGTKVIVDVIDV- 427

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  +P FQQ +Y   V E     ++V T+
Sbjct: 428 --NNNAPEFQQTSYKTTVDENVPTGTSVLTV 456



 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 25/190 (13%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTA----ASVPVSLTVNLNDINDNAPRLPMIPP- 58
            + KE+L+ D      F   V+AR+    A    A VPV++      + + A     IP  
Sbjct: 2114 LEKESLNTD------FFIVVVARDNGEPALSAEAEVPVTVVNKAMPVFEKAFYTIEIPEN 2167

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            IQ+        ++ ++A D++      + Y+I         +F ID  +GV+     L  
Sbjct: 2168 IQLHT-----PVLHVQANDSE---GPRVVYTI--SEGDPFKQFSIDFNTGVVHVVQPLDF 2217

Query: 119  GEQ--YSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 Y ++V+ATD+  G  S+  V++ ++   N  +PVF   TY  NVSE + I   + 
Sbjct: 2218 ETHPAYKLSVRATDSLTGAHSEVFVDI-ILEDVNDNAPVFLSKTYRANVSEASVIGMHIL 2276

Query: 176  TITVSRLASG 185
             +      +G
Sbjct: 2277 QVDAKDADTG 2286


>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
          Length = 14757

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 14/187 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            + LDR+  +  +++ +V+A ++   +     S+TVN+ D+NDNAPR   +PP  +   E 
Sbjct: 6368 QTLDRE--SKAEYQLEVLAEDQGIPSLQSTASITVNVLDVNDNAPRFS-VPPGSLFLNEN 6424

Query: 67   R---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGE 120
                  +  I ATD D G + ++TY +   S++    F ID ++G + +       ++  
Sbjct: 6425 EPVGSSLAFITATDEDNGRSGQVTYFLKATSDS--VGFEIDHQTGELLSNATFDYELSPR 6482

Query: 121  QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +S+TV A+D+G    SS   V VS+V   N  SP F+ N + V+V E  S+ S +A++ 
Sbjct: 6483 LHSLTVVASDSGAPPLSSSVTVNVSIV-DLNDNSPRFETNAFTVDVKESVSLTSVIASVK 6541

Query: 179  VSRLASG 185
             +   SG
Sbjct: 6542 ATDSDSG 6548



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 13/179 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPM--IPPIQIQAG 64
            +LDR+  +   +R  V A     T   S    + V++ D+NDN P+L         ++  
Sbjct: 1374 SLDREKTS--SYRLTVTATNSFATFGRSSSADVIVHILDVNDNTPQLEKANYEASVVENS 1431

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
                 ++ ++ATD+D+G N  +TYS+   S+     F ID  SGV+E TG L   +Q  Y
Sbjct: 1432 PTGTSVLTVKATDDDIGSNGAVTYSLSPSSSL----FNIDNTSGVLEVTGSLDREKQSVY 1487

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S+ V A D G  S       +V V   N  +P F ++ Y   VSE  ++ STV  +TVS
Sbjct: 1488 SLNVIAVDGGDPSRTATARATVTVADANDNTPRFSRSLYAAGVSESVAVGSTVP-VTVS 1545



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            +LDRD  +  +  F V A+E +     ASVP  +TV L D+NDN+P       I   +  
Sbjct: 3576 SLDRDTES--RIVFAVNAQESRSPFRTASVPALVTVTLLDVNDNSPVFNQSAYISAVSEN 3633

Query: 66   AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQ 121
            A   R +  + A+D D G NA++T+ I       +  F I   SG++   G L     E 
Sbjct: 3634 ALPGRIVTIVAASDADSGSNAKLTFRIIDGDRNDV--FSIGSTSGIVSVKGDLDREIIEG 3691

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            YS+TV+A D G  S +    V++ V   N   P F +  Y   V E  SI ST+ T++  
Sbjct: 3692 YSLTVEARDQGSPSLRNTTLVNITVADINDNFPEFARLAYSEAVKENISIGSTITTLSAE 3751

Query: 181  RLASG 185
             L +G
Sbjct: 3752 DLDAG 3756



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ- 60
            L +S  NLDR+     ++   V AR++   A    V +TV++ DINDNAP       +  
Sbjct: 2495 LTLSVANLDRELKT--RYSLTVTARDRGSPALLTSVGVTVDVLDINDNAPVFSKQRYVGN 2552

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
              +A      I+ + ATD D G+N ++ Y +   SN       ++P +GV+ T G L   
Sbjct: 2553 VSEAASKGTAILGLTATDLDSGLNGQVRYRLVPPSN----DLDVNPGTGVLSTKGTLDRE 2608

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            +  QY + V+A D G   +SS + V + +V   N   P F Q  Y   +SE A
Sbjct: 2609 STSQYDLIVEAFDLGVPSRSSNSSVRI-MVEDVNDSPPTFSQFLYVATISEAA 2660



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 13/191 (6%)

Query: 3    VVSKENLDRDPPN-PGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +V+  +LDR+ P  P     +V A  +  + A S  V + V + D+NDN+P       + 
Sbjct: 2389 IVTNTSLDREAPGVPTSVLVRVEASNRNASPALSAVVPVFVTIEDVNDNSPVFDEAAYVF 2448

Query: 61   --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               +   A   + ++ ATD D G N +I YS+     T    F+I   SG +  +   + 
Sbjct: 2449 NVTEMAAAFTVLGRVSATDKDSGSNGQILYSL-----TPSGVFQIGRSSGTLTLSVANLD 2503

Query: 119  GE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E   +YS+TV A D G  +  T V V+V V   N  +PVF +  Y  NVSE AS  + +
Sbjct: 2504 RELKTRYSLTVTARDRGSPALLTSVGVTVDVLDINDNAPVFSKQRYVGNVSEAASKGTAI 2563

Query: 175  ATITVSRLASG 185
              +T + L SG
Sbjct: 2564 LGLTATDLDSG 2574



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 10   DRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEAR 67
            D D  +   F   V AR+      S  V + V++ ++NDN P+  P    ++I +A    
Sbjct: 6050 DLDYEDRTNFTLFVEARDGGSPVRSSTVPVYVSILNVNDNRPQFTPATLNVKISEAAVPG 6109

Query: 68   RQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGE------ 120
             QI  + A+D D G NA + YS+   V + G  KF      GV  +TG++   E      
Sbjct: 6110 SQITTVSASDADSGDNAVLQYSVLETVGSVGYGKF------GVNASTGQVTLLEPLDREN 6163

Query: 121  --QYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              QYS+ +QA+D G  S S  I     V   N  +P+F + +Y  +++E AS+   V T+
Sbjct: 6164 RSQYSLKIQASDGGLPSLSGEITIFVTVTDVNDEAPLFTEASYLASIAENASVGDLVFTV 6223



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 23/180 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLN--DINDNAP-------RLPMIPPIQI-QAGEARR 68
            ++  + AR    +++ +P S TVN+   D+NDNAP       R  ++  + I +AG    
Sbjct: 8428 YQLVITARNPSSSSSILPRSATVNIAVLDVNDNAPIFDQMFYRWEILENVTIGKAG---- 8483

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
                ++ATD D G+N+ I YS+   S+T    F ID R G + T   L    Q  Y++TV
Sbjct: 8484 --FSVQATDADSGINSLIRYSLTDASST----FTIDHRFGDLSTLKTLDRETQASYNLTV 8537

Query: 127  QATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             A D+G  + + T    +++   N  +P F Q+ +   V E A++ S+V  ++ +   +G
Sbjct: 8538 LAVDSGSPRLTGTATVAAILLDVNDNAPTFTQSVFVGRVEENATLGSSVLLLSATDRDTG 8597



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA- 63
            +++LDR+  N      + +A +       S PV +   +N ++DN  R  +  P Q  A 
Sbjct: 9753 QKSLDREIQNLYLLTVRAVAFDPAFAPNGSSPVEVNATINVLDDNDNRPVITDPGQQTAF 9812

Query: 64   --GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                A+  +V I A D D+  N  I YS+  V + G   F+I   SGVI T  +L     
Sbjct: 9813 VGTAAQVTVVTIRAVDKDVRENGRIVYSL--VKSNGRPLFQIGNESGVISTAVELRNQSL 9870

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV- 179
              + V A+D G     + + +SV V      +P+F +  Y+ +V E A + + + TI V 
Sbjct: 9871 VQVVVIASDLGKPPLSSNLTLSVNVTNEEVEAPLFSKPFYNFSVIESAKLGTAIGTIEVT 9930

Query: 180  SRLASGCAIMNK 191
            SR ASG +++ +
Sbjct: 9931 SRNASGYSVVFR 9942



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 9/174 (5%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---R 68
            D  N   F   + A +    + +   +LT+ + ++N++AP     P  ++   E      
Sbjct: 4308 DHENVSVFNLTIEADDSGLPSLTATAALTIQIGNVNEHAPVFSQ-PEYEVSIYETAGLGT 4366

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
             IV++ A+D D G +  ++YS+   +  G   F +D  SG++ TT  L      ++ + V
Sbjct: 4367 SIVRVSASDADDGSSGRVSYSLVEGNENG--TFAVDAVSGIVTTTASLDYEMKRKFVLIV 4424

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +A D GG ++   + V+V        P+F+  +Y   VSE A +   VATI  S
Sbjct: 4425 EAIDGGGMNATARIVVNVTN-VVDTVPIFEITSYTATVSEDADVGDVVATIQAS 4477



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 9/140 (6%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ VS+TV+++D NDN P +  +    + ++        ++ A D+D G N+ +TYS+  
Sbjct: 9368 SIQVSVTVSVSDANDNIPVIEQVDIFPLSESSIVGSTAAQVTAKDDDFGANSFLTYSL-- 9425

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT--IVEVSVVPGP 148
             S T  + F +   +G I+T+  L+   +  YS+ V  TD+G  SS     ++++V    
Sbjct: 9426 -SGTHANLFTV-LSNGTIKTSQPLLLRTELFYSLVVTVTDSGIPSSSVNRSLQINVSRSD 9483

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N  SPVF Q  Y  NV+E +
Sbjct: 9484 NVTSPVFTQPLYKGNVTESS 9503



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 8     NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
             +LDR+  +   F   VIA+E +  +     ++ V L D+NDN PR    M+     +   
Sbjct: 10480 SLDREKQD--SFNVTVIAKEDKRPSVMANTTIEVALIDVNDNKPRFAVSMVTKTISETMS 10537

Query: 66    ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSI 124
                +IV++ ATD D G N  ++YSI  V+      F +D  +G +     L   G  Y++
Sbjct: 10538 VGAEIVQVPATDADSGANGIVSYSI--VTGNARDVFAVDSANGSVYVVRPLPSGGPSYTL 10595

Query: 125   TVQATDTG 132
             TV+A D G
Sbjct: 10596 TVEAKDGG 10603



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV ++D+NDN+P+           + G A R ++ + A+D+D+G N  +TY I    N+
Sbjct: 5973 LTVVVDDVNDNSPQFNASSYFASLSEGGGANRPVITVLASDSDVGENGSVTYQIVG-GNS 6031

Query: 97   GLHKFRIDPRS-GVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
            G   F +  R  G I   G L   ++  +++ V+A D G   +SS   V VS++   N  
Sbjct: 6032 G-STFALRSRGKGEIVAVGDLDYEDRTNFTLFVEARDGGSPVRSSTVPVYVSIL-NVNDN 6089

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F   T +V +SE A   S + T++ S   SG
Sbjct: 6090 RPQFTPATLNVKISEAAVPGSQITTVSASDADSG 6123



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIV 71
            +P      V+A +      S  V++ V++ D+NDN+PR        +   E+      I 
Sbjct: 6480 SPRLHSLTVVASDSGAPPLSSSVTVNVSIVDLNDNSPRFET-NAFTVDVKESVSLTSVIA 6538

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             ++ATD+D G+N ++ Y I  V         ++  +G +     L     +QY   ++AT
Sbjct: 6539 SVKATDSDSGLNGDVVYEI--VGGNEESVVAVNRSTGALTVVRSLDRERTDQYRFRIKAT 6596

Query: 130  DTGGKSS---QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G   S      V ++V    N   PVF +++Y   ++EG  + S VA+++ S   SG
Sbjct: 6597 DLGSPPSLPAYAFVNLTV-EDVNDNPPVFDRSSYQTRITEGTDVGSIVASVSASDADSG 6654



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 17/184 (9%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            +LDR+    G++   V AR+   +A    S   S+ V + DINDNAP     +      +
Sbjct: 953  SLDRE--TTGEYNMTVFARDDAASAELRQSSSASVVVQVLDINDNAPLFQKAVYTATVSE 1010

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +      +V+++ATD D G+NA ++YS  +  N G   F I+  +G++     L    + 
Sbjct: 1011 SFSVGTSVVQVKATDLDTGLNALVSYSFVN-GNVG-QAFGINSSNGLVTVAASLDFETRP 1068

Query: 122  -YSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             YS+T++A D  G S    S T+     V   N  +P F  N Y   ++E A +  +V  
Sbjct: 1069 AYSLTIEAVD--GNSVKPLSSTVTLNVAVTDSNDHAPSFSANVYRAVLNESAGVGFSVLQ 1126

Query: 177  ITVS 180
            +T S
Sbjct: 1127 LTAS 1130



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 12/170 (7%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK--IE 74
            G +R  V A +    A +    + VN+ D+NDN PR      +   + +A    V   + 
Sbjct: 4628 GFYRLTVAAIDGGSPALTGNSIIAVNVLDVNDNDPRFQQAKYVFNVSEDALIGSVAGAVG 4687

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG 132
            A D D G+N ++ YS     ++G + F +DP +G++  +G L  +     +  V ATD+G
Sbjct: 4688 AVDIDSGLNGQVKYS---APSSGRY-FSVDPANGIMTVSGSLDRVKDPVITFAVTATDSG 4743

Query: 133  G--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               +SS T V ++VV   +   P F   T+  +V EG ++  +V  +T S
Sbjct: 4744 APSRSSFTAVMINVVDVND--PPTFADQTFVTSVLEGTALGLSVLNLTAS 4791



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L V    LDR+  NP  F   +  R++   + +   ++ V + D+ND AP    I  +  
Sbjct: 5033 LRVGGAGLDRES-NP-HFVLSLEVRDRGSPSLTAATTVNVTVEDVNDEAPVFTEIQYV-F 5089

Query: 62   QAGE--ARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
             A E  +   IV  + ATDND G NA + YSI   +  G   F ++P  G IET   L  
Sbjct: 5090 HAPENVSSNSIVGLVSATDNDAGTNAFVKYSITEGNANG--TFSVNPFLGEIETNRALDR 5147

Query: 117  --IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +A   YS+ V ATD G  S  + V+V V V   N ++P
Sbjct: 5148 ENVAA--YSLKVLATDGGTPSLSSSVDVIVRVTDVNDKAP 5185



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 6/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR-RQIVKIEATDND 79
            F V A +    + S   ++ +N+ D+ND            +  G A    ++ + A+D D
Sbjct: 4735 FAVTATDSGAPSRSSFTAVMINVVDVNDPPTFADQTFVTSVLEGTALGLSVLNLTASDPD 4794

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
             G   E+ Y I  +   G   F I+ +SG I   G L      +Y++TV+  D G  S  
Sbjct: 4795 DGSLGELKYEIVKIHPKG--DFAINEQSGQIFVNGSLDREMSPRYTLTVKVNDFGFPSLS 4852

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +V++ +   N  SPVF+   YD ++ E  S+ ST+ T+
Sbjct: 4853 AEAQVNITIADVNDNSPVFETLLYDFSLYENVSVGSTLGTV 4893



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 24/188 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            +V  K +LDR+      +   V AR++   +      + + + DINDN P        ++
Sbjct: 3677 IVSVKGDLDREIIE--GYSLTVEARDQGSPSLRNTTLVNITVADINDNFPEFA-----RL 3729

Query: 62   QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
               EA ++       I  + A D D G N ++ Y +      G+ K      +G + T  
Sbjct: 3730 AYSEAVKENISIGSTITTLSAEDLDAGSNGDVHYVLGSGDEDGVFKLS---DAGSLVTVK 3786

Query: 115  KLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             L    +  Y +TV A D GG+   +S  +V ++V+   + R+P F Q  +D++VSE  S
Sbjct: 3787 SLDHETKISYQLTVFAVD-GGRPPLNSSVLVAITVI-DVDDRAPQFSQGQFDISVSENVS 3844

Query: 170  INSTVATI 177
            + ST+A++
Sbjct: 3845 VGSTLASV 3852



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQA--GE---ARRQIVKIEATDNDLGVNAEITYSIY 91
            V + V + D+NDN P    +P  Q  A  GE     R ++++ A D D G N ++ YS+ 
Sbjct: 875  VQVIVFVADVNDNPPVF--VPDGQYVASVGEDLAVGRTVIQVTAKDRDSGRNGQVRYSLT 932

Query: 92   HVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQATDTGG----KSSQTI 139
              S T    F+ID  +G I        ETTG      +Y++TV A D       + S + 
Sbjct: 933  AASPT---IFQIDAFTGSITLLSSLDRETTG------EYNMTVFARDDAASAELRQSSSA 983

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V  V   N  +P+FQ+  Y   VSE  S+ ++V  +  + L +G
Sbjct: 984  SVVVQVLDINDNAPLFQKAVYTATVSESFSVGTSVVQVKATDLDTG 1029



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 11/174 (6%)

Query: 7     ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
             ++LDR+     +   +   R   G  A+  V + + + D NDN+P   ++    +Q   +
Sbjct: 9963  DSLDREKVVSYRLVVEAETRSSFGGVAAASVEVNITVLDANDNSPIASVVGNASVQLNSS 10022

Query: 67    R---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-AGEQY 122
                   I +I A+DND G N ++ Y I   S   L  F +    G +    +L    +  
Sbjct: 10023 SPVGVLIAQILASDNDAGPNGKLLYRIS--SGNFLESFNVS-DDGALRLAKRLPNTNKDT 10079

Query: 123   SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              + VQ  D G   +S+   V V++V   +   P F ++ Y  NVSE  ++ +T+
Sbjct: 10080 DLVVQVLDNGNPVRSTNVFVRVTIVSQAD--GPQFDRSVYAANVSEAVAVGTTL 10131



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+ + + D+ND+ P       +    +A  A   +  +EA D D G NA   YS+    +
Sbjct: 2632 SVRIMVEDVNDSPPTFSQFLYVATISEAAPAGADVQIVEAIDGDAGSNAVFLYSLRVSLD 2691

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
            +    FRI+ RSG I+   K+   + + Y  TV+A D G        +V V V   N  +
Sbjct: 2692 S--SAFRINGRSGQIQLNRKVDRESKDVYDFTVEAIDEGASPLTGSAQVKVTVSDENDNT 2749

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVS 180
            PVF     ++++ E +   + VAT T +
Sbjct: 2750 PVFVNAVRNISLREDSPRGTEVATFTAT 2777



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 18/172 (10%)

Query: 32   AASVP----------VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATD-N 78
            AAS+P           ++TV + D+ND++P     +   +  +       + ++EA D N
Sbjct: 4212 AASIPGSDGRFLRSSAAVTVVVLDVNDHSPIFSDFLYKFLVSEDASVGSSVGRVEAIDTN 4271

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSS 136
            D+GVNA I    +   N+  H F +   SG+IE   +L       +++T++A D+G  S 
Sbjct: 4272 DVGVNAAIKSYRFTSGNSRNH-FSVS-SSGIIEVARQLDHENVSVFNLTIEADDSGLPSL 4329

Query: 137  QTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
                 +++  G  N  +PVF Q  Y+V++ E A + +++  ++ S    G +
Sbjct: 4330 TATAALTIQIGNVNEHAPVFSQPEYEVSIYETAGLGTSIVRVSASDADDGSS 4381



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 18/173 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEAT 76
            F F  ++ E Q         + + + D+NDN+P    ++    +         +  ++AT
Sbjct: 4846 FGFPSLSAEAQ---------VNITIADVNDNSPVFETLLYDFSLYENVSVGSTLGTVKAT 4896

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG 133
            D+D+G N +I YSI   S      F +  R+G I T  + +  E    YS+ + A+D G 
Sbjct: 4897 DDDIGANGDILYSIE--SGNTRDSFDVGRRNGHI-TLQRAVDYESVTNYSLIISASDGGS 4953

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  +   VSV V   N   PVF    + V V E   ++++V T++     SG
Sbjct: 4954 PTLSSTAAVSVRVLDTNDNPPVFVGGPFTVKVRENTPVSTSVFTVSAEDADSG 5006



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 13/187 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKIEATD 77
            F F V A    G       ++TV + DINDN P++ P+              IV I+ATD
Sbjct: 9557 FTFVVTASTIAGNVPPGSATVTVTIADINDNTPQVDPLTTAFVPFNATVGSHIVVIQATD 9616

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQ 137
             D GVN ++++SI  VS      F I+  +G I  T +L       I    T       +
Sbjct: 9617 PDAGVNGKLSFSI--VSGNSAQFFAINSSTGEITLT-RLFPVSVSDIPRNFTLVADVQDE 9673

Query: 138  TIVEV-------SVVPGPNTRS--PVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
             IV +         V G  +R   PVF Q++Y  +V E  + ++ +  + +S  +   +I
Sbjct: 9674 GIVPLRTNTTINITVTGIQSRDLKPVFNQSSYTASVEENLAPSAVLRVVALSSGSVRYSI 9733

Query: 189  MNKEENS 195
            ++   NS
Sbjct: 9734 ISGNSNS 9740



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 13/191 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
            +V   +LDR+  +   +   ++A ++ G   +  V +TV   DINDN P     I    +
Sbjct: 3880 LVLNSSLDREVVD--FYNLTILAVDEVGNTGTALVQITVE--DINDNPPVFERDIYRFSV 3935

Query: 62   QAGEAR-RQIVKIEATD-NDLGVNAEI-TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
              G     Q+  + A D  D G NA I +YSI + S  GL K  +DP +G +   G +  
Sbjct: 3936 AEGSGTGLQVGVVRAKDAKDAGSNARILSYSIVNTSADGLLK--LDPITGSLTVGGSIDR 3993

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             A +  ++ V A D G     +   V V +   N  +P F + TY  ++ E +++   V 
Sbjct: 3994 EAFDTITLVVSAVDAGIPRLHSTTTVVVNITDVNDNAPEFTRRTYSASILENSTVGQFVL 4053

Query: 176  TITVSRLASGC 186
            ++    + SG 
Sbjct: 4054 SVQAEDVDSGA 4064



 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 11/182 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEAR 67
            +DR+  +   F  + I         S  V +TV+  D NDN P  +  +  I ++    R
Sbjct: 2710 VDRESKDVYDFTVEAIDEGASPLTGSAQVKVTVS--DENDNTPVFVNAVRNISLREDSPR 2767

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              ++    ATD D+G N  +TYS      + L +F I+  +GV+  +  L     ++Y +
Sbjct: 2768 GTEVATFTATDRDIGNNGLVTYSF----GSFLAEFNINGSTGVVVLSRSLDFEKTQRYDL 2823

Query: 125  TVQATDTGGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
             V A+D G K +S ++    VV   N  SP F +  Y V+V+E  +++S + T   S L 
Sbjct: 2824 DVIASDNGQKPTSSSVRFSVVVVDVNDNSPSFGKAFYSVSVNESVAVSSELFTAVASDLD 2883

Query: 184  SG 185
            +G
Sbjct: 2884 AG 2885



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 12/178 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            E LDR+  N  ++  ++ A +    + S  +++ V + D+ND AP       +   A  A
Sbjct: 6157 EPLDRE--NRSQYSLKIQASDGGLPSLSGEITIFVTVTDVNDEAPLFTEASYLASIAENA 6214

Query: 67   R--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
                 +  + A D D G N  ++YSI   +  G  +F +D  +G I     L   A   Y
Sbjct: 6215 SVGDLVFTVRANDADEGTNGLVSYSIRSGNRDG--QFTVDHSNGQIAVLKPLDREAVNSY 6272

Query: 123  SITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +T+ A+D       SS   V + V+   N  +PVF   +  V++ E  ++ + VA +
Sbjct: 6273 VLTILASDFASVNPMSSSATVSIQVLDS-NDNAPVFATKSQRVDLFENVTVGTLVALV 6329



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 38   SLTVNLNDINDNAPR-LPMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D+ND  P  L     + +  G     +I ++ A D D G+N  +T   Y+++ 
Sbjct: 4544 TLFVTVGDVNDREPSFLSSFKEVNVSEGVPIGFEITQVSAEDTDAGLNGVVT--AYNLTK 4601

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
                      ++G I  +  L   E   Y +TV A D G    +  +I+ V+V+   N  
Sbjct: 4602 GNFDGVFSISQTGRISVSNSLNREETGFYRLTVAAIDGGSPALTGNSIIAVNVL-DVNDN 4660

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P FQQ  Y  NVSE A I S    +    + SG
Sbjct: 4661 DPRFQQAKYVFNVSEDALIGSVAGAVGAVDIDSG 4694



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +++V + D NDN P   +  P  ++  E       +  + A D D G+NA++ YSI   +
Sbjct: 4961 AVSVRVLDTNDNPPVF-VGGPFTVKVRENTPVSTSVFTVSAEDADSGINADLAYSIVAGA 5019

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
              G  +  I+  SG++   G  +  E    + ++++  D G  S      V+V V   N 
Sbjct: 5020 EGG--QLFINSSSGILRVGGAGLDRESNPHFVLSLEVRDRGSPSLTAATTVNVTVEDVND 5077

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +PVF +  Y  +  E  S NS V  ++ +
Sbjct: 5078 EAPVFTEIQYVFHAPENVSSNSIVGLVSAT 5107



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 38/72 (52%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
            + F V+A +      S  V + V + D+NDNAP    +    +  G +   +V++ A+D 
Sbjct: 9045 YNFTVVAIDAGIPQKSGEVIVRVTVTDVNDNAPVFTKLFYSAVVNGTSDTSLVRVSASDA 9104

Query: 79   DLGVNAEITYSI 90
            D G+N  +TYSI
Sbjct: 9105 DSGLNGAVTYSI 9116



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 18/134 (13%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIP-PIQIQAG 64
            +LDR+  +  ++RF++ A +  G+  S+P    VNL   D+NDN P         +I  G
Sbjct: 6580 SLDRERTD--QYRFRIKATD-LGSPPSLPAYAFVNLTVEDVNDNPPVFDRSSYQTRITEG 6636

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG---- 119
                 IV  + A+D D G N  +TYSI  VS   L+ F I   SG I    KL++     
Sbjct: 6637 TDVGSIVASVSASDADSGSNGIVTYSI--VSGNKLNVFEIVASSGEI----KLLSPFPRH 6690

Query: 120  -EQYSITVQATDTG 132
               +S+ +QA+D G
Sbjct: 6691 VSLFSLVLQASDGG 6704



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 31/198 (15%)

Query: 3     VVSKENLDRDPPNPGKFRFQVIAREKQ---GTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
             V+  E LDR+  +  K+ +++ A          AS     TV + D+NDN P        
Sbjct: 10165 VIVNEKLDRETVD--KYSYEIEATSFDPIVDQVASSFAKFTVTVLDVNDNKPLFE----- 10217

Query: 60    QIQAG---------EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
               Q+G         +    +    A DND G NA + Y I     +G   F I+  +G +
Sbjct: 10218 --QSGYNVSVSEDVDVGSTVFTASAADNDEGRNAIVVYEIV----SGSSSFAINTTAGEV 10271

Query: 111   ETTGKLIAGEQ--YSITVQATD--TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                  L    Q  + +T++A+D   G   S+TI+++S+V   N   PV Q  + + +V E
Sbjct: 10272 TVINSLDREVQSNFVLTIRASDILNGLFFSETILQISLV-DVNDNGPVIQPLS-EQSVKE 10329

Query: 167   GASINSTVATITVSRLAS 184
              A++ + V  +T + + S
Sbjct: 10330 NAAVGTVVFNVTATDIDS 10347



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+NDNAP           ++     + ++ ++A D D G N  + Y +    N
Sbjct: 4018 TVVVNITDVNDNAPEFTRRTYSASILENSTVGQFVLSVQAEDVDSGANGLVRYELSS-GN 4076

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             G   F ID  SG I T   L     E Y +TV A D G    SS + VEV++    +T 
Sbjct: 4077 VG-GTFSIDAVSGDIFTALSLDFETRESYRMTVVARDGGSPSLSSSSTVEVNINNLIDT- 4134

Query: 152  SPVFQQNTYDVNVSE 166
             P+F Q+ Y  ++ E
Sbjct: 4135 PPLFDQDVYKFSILE 4149



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 10/139 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            +V +   LDR+      +   VIA +    A S  V+  + + D NDNAP         +
Sbjct: 8728 VVTTARALDRE--TKAIYNLTVIATDG---ARSAEVTAIITVQDDNDNAPEFAKSYRANV 8782

Query: 62   -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             ++      ++   A+D D+G+N E++Y++  +S+     F ++  +GV+     L    
Sbjct: 8783 SESAPVGTVVLTASASDRDVGINEEVSYAVGPLSDF----FEVNSTTGVLTVARDLKPLS 8838

Query: 121  QYSITVQATDTGGKSSQTI 139
              S+T + T T   SS ++
Sbjct: 8839 GRSLTFELTATNANSSPSL 8857



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 20/159 (12%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+  +   +   VIA +    + +     TV + D NDN PR        + A    
Sbjct: 1478 SLDREKQS--VYSLNVIAVDGGDPSRTATARATVTVADANDNTPRFSR----SLYAAGVS 1531

Query: 68   RQI-------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
              +       V + ATD D G N ++ YSI   +  G   F +D  +  + T  K +  E
Sbjct: 1532 ESVAVGSTVPVTVSATDADAGANGQLIYSIVGGNING--AFNLDSATASL-TVAKSLDRE 1588

Query: 121  ---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
                Y +T+QA+D G     +   + V V   N   PVF
Sbjct: 1589 TLSSYRLTIQASDGGTSPRSSTARIFVGVSDVNDNPPVF 1627



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 43   LNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            L D+NDNAP       +  ++  A      ++ + ATD D G+NA++T+SI      G  
Sbjct: 8557 LLDVNDNAPTFTQSVFVGRVEENATLGS-SVLLLSATDRDTGLNADVTFSILSGDEDG-- 8613

Query: 100  KFRI-DPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-----VPGPNTR 151
             FR+ D  SG++   G L   + +++   VQ  +      Q+++  +      +   N  
Sbjct: 8614 AFRLSDVTSGLLVVNGSLDRESRKRHVFEVQVANIHPGVQQSVLFDTAFVNLTISNVNDE 8673

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
            SPVF    Y  ++ E      ++ T++ S
Sbjct: 8674 SPVFSSLLYSASILENRPPGQSLVTVSAS 8702



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITV 126
            +  + A+D+D G+NA ++YSI  V+      F I+  SG + T G  +  E+   Y +TV
Sbjct: 1331 VFAVVASDDDSGLNAIVSYSI--VAGNSDFAFVINSTSGEL-TVGNSLDREKTSSYRLTV 1387

Query: 127  QATD---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             AT+   T G+SS   V V ++   N  +P  ++  Y+ +V E +   ++V T+
Sbjct: 1388 TATNSFATFGRSSSADVIVHIL-DVNDNTPQLEKANYEASVVENSPTGTSVLTV 1440



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)

Query: 36   PVSLTVNLN----DINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            P+S TV LN    D ND+AP     +   +  ++      ++++ A+D D+G N +I +S
Sbjct: 1084 PLSSTVTLNVAVTDSNDHAPSFSANVYRAVLNESAGVGFSVLQLTASDPDVGTNGQIAFS 1143

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VP 146
            +    +  +  F +    G+++T   L    +  Y + VQ  D G         V+V V 
Sbjct: 1144 LV---SGDIGDFNLSA-GGLLKTARNLDYERRQTYHLVVQVEDFGFPQHSGTAAVTVEVL 1199

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N  +PVF   T   +V E  +  + V T+  +   SG
Sbjct: 1200 DENDNAPVFNTTTVFADVPENVATGTVVETLKATDRDSG 1238



 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 17/166 (10%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLG 81
            +  GTAA     +TV + D NDNAP           P  +  G     +  ++ATD D G
Sbjct: 1187 QHSGTAA-----VTVEVLDENDNAPVFNTTTVFADVPENVATGTV---VETLKATDRDSG 1238

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGG-KSSQTI 139
             N +I+YSI  VS     KF  D    VI           +Y + V+A D G  + S   
Sbjct: 1239 SNGDISYSI--VSGNSEGKFVADKTGNVIVVASLDFEKIREYRLGVEARDGGNPQLSAVG 1296

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V  V   N   P+F  + +  +V E  +I ++V  +  S   SG
Sbjct: 1297 NLVVTVVDVNDNDPLFSSSVFTTSVDENVAIGTSVFAVVASDDDSG 1342



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 17/153 (11%)

Query: 38   SLTVNLNDINDNAP-------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            ++++ + D NDNAP       R+ +   + +        +  + ATD DLG+N  + Y I
Sbjct: 6292 TVSIQVLDSNDNAPVFATKSQRVDLFENVTVGT-----LVALVNATDRDLGLNGVVAYMI 6346

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
                  G  +F ID  +G +     L   +  +Y + V A D G  S Q+   ++V V  
Sbjct: 6347 ETGDPDG--RFLIDSVTGALTVAQTLDRESKAEYQLEVLAEDQGIPSLQSTASITVNVLD 6404

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N  +P F      + ++E   + S++A IT +
Sbjct: 6405 VNDNAPRFSVPPGSLFLNENEPVGSSLAFITAT 6437


>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
          Length = 4541

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 VFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATRYEVSI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
            ++  A+   ++K+ A+D D G NA++TY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 RSSAAKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGVIATKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+ATD G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRATDNGSPSRESVVPVYVKILPPELQLPKFSEPFYTYTVSEDVPIGTEIDVI 2725



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ DINDN P           + +     +++++ A   D+  NA+ITYSI  +S 
Sbjct: 3186 TVVVSVLDINDNPPVFEYREYGATVSEDVLVGTEVLQVYAASRDIEANADITYSI--ISG 3243

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                KF +D ++G +   G L   +  +Y +TV+ATD G  S   +  VS+ V   N  S
Sbjct: 3244 NEHGKFSLDSKTGAVFIIGNLDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNS 3303

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF Q TY   +SE A +  +V T+
Sbjct: 3304 PVFSQATYTAVISEDAVLEQSVITV 3328



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 73/152 (48%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V+++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVDVSDTNDHAPWFTSSSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNV 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V V V    N  S
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRNNQVEYDLMVKATDKGSPPMSEMTSVHVFVTVADNA-S 1664

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y V +SE  SI S VA +T    +S
Sbjct: 1665 PKFTSKEYSVEMSETVSIGSFVAMVTAHSQSS 1696



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + V + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYVEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N  + Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 VMENSPKDVSVVQIEAFDPDSSSNDRLMYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  + V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D NDN P         RLP       +    R  + ++ A D D G NAEI+YS
Sbjct: 1231 IIVKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPVYRVIAGDKDEGPNAEISYS 1290

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV-- 145
            I   +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  
Sbjct: 1291 IEDGNELG--KFFIEPKTGVVSSRKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISK 1348

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P P+     F+++ +   V E   +   +  I+V
Sbjct: 1349 PKPSPEPLSFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F V+AR  QG    V  V +++ + D NDN+P     P     ++   A  ++++I A
Sbjct: 2774 YQFSVLARCTQGDYEVVSSVDVSIQVKDANDNSPVFESSPYEAFIVENLPAGTRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHV-SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            +D D G N ++ Y +    S   +  F I+  +G I T  +L     + Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYRLDQSQSMEVVESFAINVETGWITTLKELDHEKTDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             K   SS  IV+V+V    N   P F    Y   VSE       VA ++ +
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPPGGVVAILSTT 2943



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 13/151 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++++N+ DINDN+P         + + +A   + ++ + A D D  +N+ I YSI    N
Sbjct: 3291 TVSINVTDINDNSPVFSQATYTAVISEDAVLEQSVITVMADDADGPLNSHIHYSIID-GN 3349

Query: 96   TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPN 149
             G   F IDP  G ++ T  L    I+G  Y++TVQA+D G   K + T V + V    N
Sbjct: 3350 RG-SSFTIDPVRGEVKVTRLLDRETISG--YTLTVQASDNGSPPKVNTTTVNIDV-SDVN 3405

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +P F +  Y V + E   +  +V  + V+
Sbjct: 3406 DNAPAFSRENYSVVIQENKPVGFSVLQLVVT 3436



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 19/189 (10%)

Query: 9    LDRD--PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGE 65
            LDR+  P +  K   + +ARE+    ++V   L V+L D+NDN P+   IPP  +++  E
Sbjct: 883  LDREVQPVHYLKIEARDLAREEPQLFSTV--VLKVSLEDVNDNPPKF--IPPNYRVKVRE 938

Query: 66   ARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
               +   ++ +EA+D DLG + ++ YS+    + G   F +D  SG +    +L   ++ 
Sbjct: 939  DLPEGTVVMWLEASDPDLGQSGQVRYSLM---DHGEGNFDVDKLSGAVRIVQQLDFEKKQ 995

Query: 122  -YSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             Y++TV+A D G      S+  +    V    N   PVF        V E A I S V T
Sbjct: 996  VYNLTVKAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGAVKEDAPIGSLVMT 1055

Query: 177  ITVSRLASG 185
            ++     +G
Sbjct: 1056 VSAHDEDAG 1064



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 29/147 (19%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++ A EA   I  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDA-EAGHVIRHVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGV-------IETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNT 150
             F+I P   +       ++T  K     +Y +TV A D G    S++ IV V+VV   N 
Sbjct: 2126 HFQIGPLGEISLKKPFELDTLNK-----EYLVTVVAKDGGNPAFSAEVIVPVTVV---NK 2177

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              PVF++  Y   + E   ++S V  +
Sbjct: 2178 AIPVFEKPFYSAGIPENIQVHSPVVHV 2204



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVN 83
           + QG A  V      + + +N +AP+     P  +Q  E +     ++ + +TD D G N
Sbjct: 694 QSQGEAEDV----FFDSHSVNAHAPQFRSALPTAVQVRENQPVGSSVILMNSTDLDTGFN 749

Query: 84  AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTI 139
            ++ Y+I   +      F ID  +G+++    L     ++Y++ +   D G   K++  +
Sbjct: 750 GKLVYAISGGNEDSC--FIIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRL 807

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V+VV   N   P F Q +Y V VSE   ++S +  +
Sbjct: 808 LDVAVVDA-NDNPPEFLQESYFVEVSEDKEVHSEIIQV 844



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + E+ YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEVRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ V         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYVEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 45   DINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTG 97
            D ND+ P+        +IP   +   E    I++I ATD D     ++ Y++   V    
Sbjct: 1448 DTNDHRPQFSTSKYEVVIPEDTVPETE----ILQISATDQD--EKNKLIYTLQSSVDPLS 1501

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
            L KFR+DP +G + T+ KL   A  Q+ +TV   D      +    + V V   N  +P 
Sbjct: 1502 LKKFRLDPATGSLYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVDVSDTNDHAPW 1561

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F  ++Y   V E A++ S V  +T
Sbjct: 1562 FTSSSYKGRVYESAAVGSVVLQVT 1585



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ VQ T+  G S+ T V V +    N  SPVF Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPIYTLIVQGTNMAGLSTNTTVLVHL-QDENDNSPVFAQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE AS+NS V T
Sbjct: 1768 AEYTGLISESASVNSVVLT 1786



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 5/143 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DIND+ P            +A      +V++ ATD+D   N  I+Y
Sbjct: 2261 TGAHAEVFVDIVVEDINDSPPVFAQQSYAATLSEASVVGTSVVQVRATDSDSEPNRGISY 2320

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVV 145
             ++   +     F ID  SG+I     L   +  Q++I V+A D G    S  +V    V
Sbjct: 2321 QMFGNLSQSHDHFHIDSSSGLISLLRTLDYEQSRQHTILVRAVDGGMPPLSSDVVVTVDV 2380

Query: 146  PGPNTRSPVFQQNTYDVNVSEGA 168
               N   P+F+Q  Y+  +SE A
Sbjct: 2381 TDLNDNLPLFEQQIYEARISEHA 2403



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  + ++ ATD D+G N E  YS    ++     F I P SGV+  TG+L  +  + Y +
Sbjct: 165 RTSVARVSATDADIGTNGEFYYSFKDRTDM----FAIHPSSGVVVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYS   +++
Sbjct: 808 LDVAVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGRVTYSF--LTD 864

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ---TIVEVSVVPGPNT 150
           T +  F ID  +GV++    L    Q  + + ++A D   +  Q   T+V    +   N 
Sbjct: 865 TDV--FSIDSTTGVVKIVQPLDREVQPVHYLKIEARDLAREEPQLFSTVVLKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPKFIPPNYRVKVRE 938



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +V+++  D D G+   +TY I  V++    +F I+ R G + T  KL     A +  S+ 
Sbjct: 2511 VVEVKTVDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQVFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+V++   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATRYEVSIRSSAAKGTSVIKVLASDADEG 2626



 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +  +F  QV         A    ++T+++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFQFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFARPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D R+G +          +Y +T
Sbjct: 1894 RGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDHRTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +  T V+++V     +    F ++ Y   V E ++    +A IT
Sbjct: 1952 IRASD-GRFAGLTSVKINVKESKESHLK-FTRDVYSAVVKENSTEAKMLAVIT 2002



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 21/123 (17%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREQRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV---IE 111
             IP   +      + I+++ ATD D+  NAEITY++     +G  KFR++P +GV   I+
Sbjct: 3031 TIPEDALPG----KLIMQVSATDADIRSNAEITYTLL---GSGAEKFRLNPDTGVESAID 3083

Query: 112  TTG 114
             TG
Sbjct: 3084 DTG 3086



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 9/108 (8%)

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            ATD D G+N +I+YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G
Sbjct: 3120 ATDADAGLNRKISYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQG 3176

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 S+   V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3177 LPRRLSASGTVVVSVL-DINDNPPVFEYREYGATVSEDVLVGTEVLQV 3223



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 20/142 (14%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +NDN      +P  + Q  EAR          +  ++A D D     ++ YSI  +S   
Sbjct: 2383 LNDN------LPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDVDKLQYSI--LSGND 2434

Query: 98   LHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F +D  +G+I  +   +      YS+ +  +D   +SS   V V+V  G N  SP F
Sbjct: 2435 QKHFVVDSTTGIITLSNLRRHTLKPFYSLNMSVSDGVFRSSAQ-VHVTVTGG-NLHSPAF 2492

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             QN Y+V ++E A +++ V  +
Sbjct: 2493 LQNEYEVELAENAPVHTLVVEV 2514


>gi|432864259|ref|XP_004070252.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
          Length = 3342

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F  QV A+       +    + VN+ D+NDN P     +      +  +    ++++ A 
Sbjct: 1742 FSLQVRAQNVAAVPLAAFTRVYVNITDVNDNVPFFTSSIYEASVTEGAQVGTSVLQVSAH 1801

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-- 132
            D DLG+N EITYS+ + S+     FRIDP+ GVI T       A   Y + VQ+ D    
Sbjct: 1802 DKDLGLNGEITYSLLNDSSGDHRLFRIDPKYGVIFTEAVFDREARSSYLLEVQSEDGEES 1861

Query: 133  ---GKSSQTIVEVSVV----PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               GK+ Q   + + V       N   PVF Q  Y+V V E A +   V T++ S
Sbjct: 1862 ARPGKNKQPNTDTAYVRVFISDVNDNKPVFAQRLYEVGVDEDADVGLAVVTVSAS 1916



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 13/172 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLT----VNLNDINDNAPRLPMIPPIQIQAGEARRQ---- 69
            ++   V A +   +    P+S T    V ++D+N+N P        + QA     Q    
Sbjct: 1416 EYVLNVTATDDNASGGPHPLSSTARVIVGVDDVNNNKPVFEECLQYREQASVLENQPTGT 1475

Query: 70   -IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
             ++++ A D D G N ++ Y + H  ++    FRI P +GVI T  +     Q  YSITV
Sbjct: 1476 FVLQVHAVDADEGANGKVKYGLMH-RDSATPAFRIYPDTGVIVTARRFDRERQREYSITV 1534

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ATD   +    I +++V +   N  SP F+   Y+  + E   + ++   +
Sbjct: 1535 TATDWAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRV 1586



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 17/134 (12%)

Query: 41   VNLNDINDNAPRLPMIP-------PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            + + D+NDN P   M P       P     G     + +++A D D G + E+ Y    +
Sbjct: 1032 LKITDVNDNVPEWNMKPYPYLAVVPPDAPMGTF---VYQLQARDGDEGRSGEVEY---FL 1085

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            S+ G   F +D ++G + TTG L   + +Y ++V A D  G  S+  + +SVV G   R 
Sbjct: 1086 SDGGDGCFAVDKKTGRVLTTGLLFQKDREYLLSVVALDGMGSHSEPAM-LSVVAG--ARP 1142

Query: 153  PVFQQNTYDVNVSE 166
            P F  ++Y +++ E
Sbjct: 1143 PQFTNSSYSISIPE 1156



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--------GEARRQI 70
            +RF V+A +++G   +    + +++ DINDN+P   +  P             G    ++
Sbjct: 2066 WRFVVMATDEEGEGLTGFTDVIISVWDINDNSPTF-LCAPDNCNTNVAENSPPGTFVMEM 2124

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNT--GLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
              ++A D  +G NA +TY I   +++  G   F ID  +G I      +  E   ++ + 
Sbjct: 2125 TAVDADDAAVGQNAILTYRITENAHSPNGAELFSIDSSTGSISVAADGLDRELADRHHLV 2184

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++A D GG +    V V+V    N   P F++     +V E
Sbjct: 2185 IEAMDGGGMTGTATVTVAVT-DINDHVPTFREEWCGASVPE 2224



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 22/138 (15%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIPP 58
            K  LD +  NPG+ RF +  R +    +S+ ++  + + D NDNAP       +L  +P 
Sbjct: 2277 KRKLDFE--NPGEQRFNLTIRVEDSDFSSL-INCLIQVEDENDNAPVFVPKTHQLSALPE 2333

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              +  G +   +V++ ATD+D G N +I YSI   S+    +F +   +GV+     L  
Sbjct: 2334 -DVSVGTS---VVQVVATDSDSGPNGDIWYSILPQSDP-YDQFTVS-HAGVVAVAKPLDR 2387

Query: 117  --IAGEQYSITVQATDTG 132
              +AG  Y + V ATD G
Sbjct: 2388 ETVAG--YELVVMATDRG 2403



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 11/112 (9%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---GEQYSITV 126
            ++++ ATD D G NAE+TY  Y +S      F I P  G I    +L        Y   V
Sbjct: 1266 LLQVLATDCDSGFNAELTY--YTLSP----DFSISPH-GTIFPARRLDFERPNHLYEFVV 1318

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G +       V V +   N  +P F Q  Y   VSE A  N+ VAT+
Sbjct: 1319 MAVDGGDEPHSGTATVRVRIANVNDEAPEFSQPVYRTFVSEDAGPNTLVATV 1370



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV + D NDN+P+   +        +       +++ A D+D G NA I YS+   S  
Sbjct: 1550 LTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAAHDDDFGSNAAILYSM---SQE 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
                 +++P +G +     +      +  + ATD G +SS   + V++    N + P ++
Sbjct: 1607 QPEYLQVNPVTGWVYVNQPISQTAYITRDIIATDGGNRSSSVELAVTITNVKN-QPPRWE 1665

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +++Y V + E    ++ + TI
Sbjct: 1666 KDSYSVIIPENTPRDTPIVTI 1686



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 8/124 (6%)

Query: 41   VNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN P     +  + + +  +    +V + A+D D G N ++ Y I   +  G 
Sbjct: 1879 VFISDVNDNKPVFAQRLYEVGVDEDADVGLAVVTVSASDEDEGANTKLRYQITSGNKGG- 1937

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              F I+P  G I     L   +Q  Y + V A+D  GK       V  V   N  +PVF 
Sbjct: 1938 -AFDIEPEVGTIFIAQPLDYEQQKRYKLLVLASD--GKWEDYAAVVVTVVNKNDEAPVFS 1994

Query: 157  QNTY 160
             + Y
Sbjct: 1995 MSEY 1998


>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
          Length = 3480

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 9/184 (4%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            LV +K  LDR+  +   +  +V A +    + S   ++T+ +ND+NDN+P+       + 
Sbjct: 1762 LVTTKRPLDRE--DQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLT 1819

Query: 61   IQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +    A    I+++ A+D D G N  +TYSI  +S    + FRID  +G I   G +   
Sbjct: 1820 VTENTANGSNILRVLASDPDAGANGRVTYSI--ISGNHGNAFRIDSTTGRITVVGVVDRE 1877

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            A   Y++T+ A D+G     +   V++ V   N  SP+F  N     + EG SI S VA 
Sbjct: 1878 ALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAV 1937

Query: 177  ITVS 180
            +T +
Sbjct: 1938 VTAT 1941



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 13/155 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            L +N+NDINDN P   +  P   Q+       A  Q++++ ATD D   N  + + I   
Sbjct: 967  LLINVNDINDNPP---VFSPSAYQSRVKENTPAGTQVIQVSATDRDSSTNGALVFGIIKG 1023

Query: 94   SNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            ++ G+  F ID  +G+I            +Y +TVQA D G        +V++ +   N 
Sbjct: 1024 NDDGV--FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVND 1081

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             SPVF  + Y   + E   I STV T+T + L SG
Sbjct: 1082 HSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSG 1116



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 10/147 (6%)

Query: 39   LTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LTV +ND+NDN P       I  ++  + ++   ++ + A D+D+G NA + YSI  +S 
Sbjct: 2006 LTVVVNDVNDNPPVFNSQSYIGSVRENSAQST-SVLTVAADDSDVGANAVLRYSI--ISG 2062

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                +F+I+  SGVI TT  L   E  QY + V ATD+   +++T V + V+   N  +P
Sbjct: 2063 NDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS-KYTAKTNVTIRVI-NLNDITP 2120

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F Q  Y  +V E +  +++V  ++ S
Sbjct: 2121 AFTQQNYTASVRENSPTSTSVVKVSAS 2147



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L+   + LDR+      +   V A E      SV  + T+ + D+NDNAP   P      
Sbjct: 1658 LISVAKRLDRE--TTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKS 1715

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +       Q V K+ ATD D G NA++TY +  V +T   KF ++P +G++ T   L   
Sbjct: 1716 LHENLPIGQTVAKVTATDRDEGENAKVTYEL-SVGDTS--KFEVNPATGLVTTKRPLDRE 1772

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            +Q  YS+ V A D G  S   +  +++ +   N  SP F Q+ Y + V+E  +  S +  
Sbjct: 1773 DQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILR 1832

Query: 177  ITVS 180
            +  S
Sbjct: 1833 VLAS 1836



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 16/183 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
           LDR+     K  + ++     G   ++  +L + ++D+NDNAP   + +    +    A 
Sbjct: 734 LDRE----AKSAYDLVVEASDGNIIAI-AALKITVDDVNDNAPFFALSVYKTGVYEDVAV 788

Query: 68  RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
             IV+ + A D D+G+NA ++YS+  VS    + F +D + GVI T G         Y +
Sbjct: 789 GSIVRQLTAVDLDVGINARLSYSL--VSGDTSY-FTVDSQ-GVIRTKGAFDRETKASYQV 844

Query: 125 TVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            ++A D G   +S Q  VE+ ++   + R PVF    Y  +V E  +I + + T+T S  
Sbjct: 845 ALRAQDGGSPSRSGQATVEIEILDVNDNR-PVFSSAQYTASVDEDVAIGAAMVTVTASDK 903

Query: 183 ASG 185
            +G
Sbjct: 904 DNG 906



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 30   GTAASVPVSLTVNLN--DINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEI 86
            G+      + TVN++  D NDN P         I +      ++ ++ ATD D+G N  +
Sbjct: 1373 GSLVRFMAATTVNISIADENDNQPTFTGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAV 1432

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEV 142
            TY+I  +S    + F++DPRSG++     L       Y++ V+A+D G   +S    + V
Sbjct: 1433 TYAI--ISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHV 1490

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            SV+   N  +P F+++ +   + E AS++STV  + V
Sbjct: 1491 SVLD-VNDNAPRFEKSLFSGEIREDASVHSTVLQVKV 1526



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 15/188 (7%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQI 61
            VS E LDR+      +  QV AR+   T+ S    +T+ L DINDN+P    P +  +  
Sbjct: 1145 VSSE-LDRE--TTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVS- 1200

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE- 120
            ++     QI ++ ATD D   N ++ Y++    NT +  F I+  +G+I    +L   + 
Sbjct: 1201 ESSSPGHQIGQVAATDADDSSNGDVRYAL--SDNTDV--FSINTSTGLITLKTQLDYEKK 1256

Query: 121  -QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             QY +TV A D G   +SS T+V+V +V   N   P F ++ Y   V E  +    V  +
Sbjct: 1257 TQYMVTVTAKDGGTPSRSSLTVVKV-MVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYV 1315

Query: 178  TVSRLASG 185
            T +   SG
Sbjct: 1316 TATDADSG 1323



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 11/172 (6%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQI 70
           D  +  ++R  V+A++           + +++ D NDNAP  P+   +  I+      Q+
Sbjct: 530 DRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV 589

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
             + ATD D G NA ITYS++    +G +KF ++ ++G I T   L    + S T++ + 
Sbjct: 590 AIVTATDRDSGTNAAITYSLF----SGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISA 645

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNT-----YDVNVSEGASINSTVATI 177
             GK +  +  V  +   N   P FQ +          V E A +N+ + T+
Sbjct: 646 FDGKHTTFVPLVINILDVN-EPPRFQDDCTRRGDCSATVLESAPLNTRIVTL 696



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  N   +   + AR+      +  +++ V + DIND+ P   +I    ++      
Sbjct: 2388 LDRE--NKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP---LINSSSLRGSVREN 2442

Query: 69   Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
            Q     +++I A+D D G+NAE+T+S+  +SN     F +D  +G I T   L   +Q  
Sbjct: 2443 QPKETHVMRILASDADTGLNAELTFSL--LSNEHKSVFTLDNTTGDISTKVPLDREQQAV 2500

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASI 170
            Y++ +   D G  S  ++ +V + V   +   P FQ   Y+V +SE    GASI
Sbjct: 2501 YTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASI 2554



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVNAEIT 87
            S+  S+ V++ D+NDNAPR        + +GE R        +++++  D D G N  IT
Sbjct: 1483 SITASIHVSVLDVNDNAPRFEK----SLFSGEIREDASVHSTVLQVKVEDKDEGSNGAIT 1538

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKSSQTIVEVSV-V 145
             S+   S  G   F ID    V+  T         Y +TV A D G  S     +V + +
Sbjct: 1539 LSL---SGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITI 1595

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P F       ++ E  +IN+ V  +
Sbjct: 1596 INVNDNVPSFVSPAQVTSIPEDVAINTHVVKL 1627



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 27/179 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPI 59
           ++ +K   DR+     K  +QV  R + G + S     TV +   D+NDN P        
Sbjct: 827 VIRTKGAFDRET----KASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYT 882

Query: 60  -----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
                 +  G A   +V + A+D D G NA++ YS +   NT  H F +D  +GV+ T  
Sbjct: 883 ASVDEDVAIGAA---MVTVTASDKDNGNNADLRYS-FTSGNTN-HAFTLDAVTGVV-TVS 936

Query: 115 KLIAGEQ---YSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           + +  EQ   Y++ +  TD G      +S  ++ V+ +   N   PVF  + Y   V E
Sbjct: 937 RSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDI---NDNPPVFSPSAYQSRVKE 992



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
            ++  + ATD D G NA++ YSI     +    F I+  +GV+ T  K I  E    Y++T
Sbjct: 1934 RVAVVTATDRDEGSNAQVFYSIVRGDTSA---FAINAMNGVL-TVKKEINRETVPTYTLT 1989

Query: 126  VQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++A+D G     +  E++VV    N   PVF   +Y  +V E ++ +++V T+
Sbjct: 1990 IRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTV 2042



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +T+ + D NDN+P+          ++         K+ ATD D G NA ITY++     +
Sbjct: 2211 VTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNL-----S 2265

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNTR 151
                F I   SGVI    KL   EQ   Y++ VQA D G  + +   V V + V   N  
Sbjct: 2266 RNDAFMIGASSGVITNVRKL-DREQVSIYTLYVQAVDQGNPRLASEWVPVHIRVQDENDN 2324

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            +P F  +  + NVSE A + + +A +
Sbjct: 2325 APRFVSSG-NCNVSENAVVGAIIAEL 2349



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQ 69
            D  N  ++   V AR++          +T+ + D+ND++P   P     QI ++      
Sbjct: 1045 DYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGST 1104

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            +V + ATD D G    + Y +  +S      F ID  SG I  + +L       YS+ V+
Sbjct: 1105 VVTVTATDLDSGPRGRLEYRL--ISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVE 1162

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            A D G  S  +   V++ +   N  SP+F Q  Y   VSE +S
Sbjct: 1163 ARDGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRVSESSS 1204


>gi|322800567|gb|EFZ21553.1| hypothetical protein SINV_02181 [Solenopsis invicta]
          Length = 1368

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 11/184 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           + ++E LDR+    G     + AR++   + +  V L V + D+NDN+P +  P    + 
Sbjct: 329 ITTREPLDREAK--GVHELVLEARDQGIPSRAARVPLKVTVLDVNDNSPEIVDPQRDVVS 386

Query: 61  IQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
           ++  +    ++ ++ A D DLG NA +TYSI    ++ G + F IDP +G+I T   L  
Sbjct: 387 VREEQPTGTEVARVRALDTDLGENASVTYSISKDRDSDGYNVFTIDPITGMIRTKAVLDH 446

Query: 119 GEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E+  Y ++V+ATD G   + S+ ++ V V+   + R P F  ++   NV E ASI   V
Sbjct: 447 EERNVYRVSVRATDAGHPPRHSERVLRVEVLALADNR-PTFTSSSLTFNVREDASIGHAV 505

Query: 175 ATIT 178
            +++
Sbjct: 506 GSVS 509



 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 18/184 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQ 62
            LDR+      + F V+A +  +  A S  + + +N++D+NDNAP     P     P+  Q
Sbjct: 956  LDRE--RQSSYTFFVVATDSGRYDAKSTSIPVEINISDVNDNAPIFEEYPFRARVPVGTQ 1013

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GE 120
             G+    I+++ A D D G N +I YS+  ++     KFRI P +G +  +  L    G 
Sbjct: 1014 PGQ---NILRVSAKDADDGANGDIVYSL--INEQEKPKFRIHPSTGEVTASLSLSQDNGR 1068

Query: 121  QYSITVQATDTGG--KSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSEGASINSTVATI 177
             Y + V A D G   KS++ ++E+ V    + T S  FQ +TY+V V E ++  + +  I
Sbjct: 1069 TYHLEVLAQDKGNPPKSTKGLIELQVGDHADLTPSLKFQNDTYNVVVQENSAAGTEIVKI 1128

Query: 178  TVSR 181
            T  R
Sbjct: 1129 TAVR 1132



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 22/201 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQ-----------VIAREKQGTAASVPVSLTVNLNDINDN 49
           YL   + +L  DP N G  R +           V++ E   + +     + V + D+NDN
Sbjct: 8   YLAREEADLSLDP-NTGMLRIRQPLDRESRDKYVLSIEAHNSGSVGYCQMEVIVEDVNDN 66

Query: 50  APRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR 106
            P       ++I   E+      +    ATD D+  +  I Y +      G + FRI+ +
Sbjct: 67  PPSF-RTSTVRISVPESHPLHEPLYVAHATDPDITPSLPIRYVL---GQNGNNLFRINVQ 122

Query: 107 SGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           +G +  T +L    Q  + + + A D  G SS   + V V    N   PVF++N Y V V
Sbjct: 123 TGELYLTKRLDYETQQRHGLLITALDGTGLSSNLSLSVEV-QDVNDNPPVFERNEYHVEV 181

Query: 165 SEGASINSTVATITVSRLASG 185
            EGA ++S +  +T   L +G
Sbjct: 182 PEGARLDSQILQVTAVDLDTG 202



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 9/164 (5%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ- 69
            +P    +    V+AR          V + + ++D+NDN P    M     +  G  +   
Sbjct: 1208 EPRESSRHILNVVARTVSQEVLEAYVKVIIRISDVNDNPPIFTQMQYSATVLEGNTKGDF 1267

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG--EQYSITV 126
            +VK+ A+D D G+N+ I Y I  V     + F I  P SGV+ T   L     E+Y +T+
Sbjct: 1268 VVKLSASDADQGLNSRILYHI--VDGNPDNAFTISPPYSGVVRTNIVLDREIREKYRLTI 1325

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             ATD G         +SV V   N   P F +++  ++VSEG S
Sbjct: 1326 IATDQGNPQLTGTAALSVRVIDVNDNQPTFPEHSI-ISVSEGKS 1368



 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 12/162 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V   +LDR+  +      + +     G   S  VS+ + +ND NDN P  P   PI I+
Sbjct: 542 LVVAHSLDRENVSEYHLEIRALDTTSLGNPQSTAVSVKIIINDANDNPPSWPQ-DPIIIR 600

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIA 118
             E       I  + A+D D G+N ++ Y +       G   F +D  +G +    +L  
Sbjct: 601 VSERAAIGSTIYNLTASDRDSGLNGDLRYGLVAEFPPKGY--FAVDSLTGALTLAKQLDR 658

Query: 119 GE--QYSITVQATDTGGKSSQTIVEVS---VVPGPNTRSPVF 155
            E  +Y + ++A+D      Q    V+   +V   N   PVF
Sbjct: 659 EERTEYVLILKASDRASPGEQLAAMVTARIIVLDQNDNDPVF 700


>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
          Length = 4588

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA++TY+I   S++      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADVTYAIEADSDSVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P T+ P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPETQLPKFSEPFYTYTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +T++ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   VSE A +  +V T+
Sbjct: 3330 DNAPVFSQDTYTAVVSEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 19/192 (9%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I A D D+  NAEITY++   S +G  KF+++P +G ++T+  
Sbjct: 3031 TIPEDVLPG---KLIMQISAADADIRSNAEITYTL---SGSGAEKFQLNPDTGELKTSAP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E     + 
Sbjct: 3085 LDREEQAVYHLLVRATDRGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFENTEPGTL 3143

Query: 174  VATITVSRLASG 185
            +  +  +   SG
Sbjct: 3144 LTRVQATDADSG 3155



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 IIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D DL  N ++ Y I   +  G   F + P++G+I TT + +  
Sbjct: 1148 ILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGF--FAVHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      +  V + V   +   P
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKDYSVEISETVSIGSFVGMVTAHSQSS 1696



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   + A +    + S   ++ VN+ D+NDNAP         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI   +  G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVLADDADGPSNSHIHYSIIDGNQGG--PFTIDPVRGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTAVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLRLVVT 3465



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR  Q      ASV VS+ V   D NDN+P     P     ++      ++++I
Sbjct: 2774 YQFSILARCTQDDREMVASVDVSIQVK--DANDNSPVFESSPYEAFIVENLPGGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N+++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2832 RASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2892 HGEKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R           S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDRGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DSGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2428 SI--LSGNDHKHFIIDSATGIITLSNLRRHTLKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDNAP            +A      +V++ ATD+D   N  I+Y
Sbjct: 2261 TGAHAEVFVDIIVEDINDNAPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISY 2320

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSV 144
             +    +     F +D  +G+I     L     ++++I V+A D G    SS  IV V V
Sbjct: 2321 QLSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDV 2380

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
                N   P+F+Q  Y+  +SE A
Sbjct: 2381 T-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 LDVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQ---TIVEVSVVPGPN 149
           T   KF ID  +GV++    L   +  E Y + ++A D   +  Q   T+V    +   N
Sbjct: 863 TDTDKFSIDSATGVVKIMHPLDRELQHEHY-LKIEARDQAREEPQLFSTVVLKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGSI-ITQKALDFETLPVYTLIIQGTNMAGLSTNTTVSVQL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            SPVF Q  Y   +SE ASINS V T
Sbjct: 1762 SPVFMQAEYTGLISESASINSVVLT 1786



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DL  + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLAQSGQVRYSLM---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTG 132
            ++TV+A D G
Sbjct: 998  NLTVRAKDKG 1007



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+  ++TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGDVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +G+IET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGIIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q  Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQGVYSAVVKENSTEAKTLAVIT 2002



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  +++V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I+ I A D D     E    IY +  +     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILHISAVDQD-----EKNRLIYTLQGSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
           LTV++   N+ AP   +I  + +   E  R     IV ++  D D G N EI  S+  V+
Sbjct: 243 LTVHIEQANECAP---VITAVTLSPSELDRDPTYAIVTVD--DCDQGANGEIA-SLSIVA 296

Query: 95  NTGLHKFR-IDPRSGVIETTGKLIAGEQ-------YSITVQATDTGGKSSQTIVEVSVVP 146
              L +FR +    G  E   K I+G         Y++T+QA D G     + V+V  V 
Sbjct: 297 GDLLQQFRTVRSFPGSKEYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQFSSVKVIHVT 356

Query: 147 GPNTRS-PV-FQQNTYDVNVSEGASINSTVATI 177
            P  ++ PV F+++ Y   +SE A  N+ V  +
Sbjct: 357 SPQFKAGPVKFEKDVYRAEISEFAPPNTPVVMV 389



 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N  +PVF 
Sbjct: 2226 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVEDINDNAPVFA 2284

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y   +SE + I ++V  +
Sbjct: 2285 QQSYAATLSEASVIGTSVVQV 2305


>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
          Length = 4591

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2551 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2608

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA++TY+I   S++      I+  SGVI T   LI   
Sbjct: 2609 GSSAAKGTSVIKVLASDADEGSNADVTYAIEADSDSVKENLEINKLSGVITTKESLIGLE 2668

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P T+ P F +  Y   VSE   I + +  I
Sbjct: 2669 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPETQLPKFSEPFYTYTVSEDVPIGTEIDLI 2728



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3218 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3272

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +T++ATD G  S   +  V+V V   N
Sbjct: 3273 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVN 3332

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   VSE A +  +V T+
Sbjct: 3333 DNAPVFSQDTYTAVVSEDAVLEQSVITV 3360



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 19/192 (9%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2979 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3033

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I A D D+  NAEITY++   S +G  KF+++P +G ++T+  
Sbjct: 3034 TIPEDVLPG---KLIMQISAADADIRSNAEITYTL---SGSGAEKFQLNPDTGELKTSAP 3087

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E     + 
Sbjct: 3088 LDREEQAVYHLLVRATDRGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFENTEPGTL 3146

Query: 174  VATITVSRLASG 185
            +  +  +   SG
Sbjct: 3147 LTRVQATDADSG 3158



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 IIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D DL  N ++ Y I   +  G   F + P++G+I TT + +  
Sbjct: 1148 ILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGF--FAVHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 8/153 (5%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH--VS 94
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI      
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGIFG 1607

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            N G + F IDP  G I+T  +L    Q  Y + V+ATD G      +  V + V   +  
Sbjct: 1608 NIG-NSFMIDPVLGSIKTAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNA 1666

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             P F    Y V +SE  SI S V  +T    +S
Sbjct: 1667 PPKFTSKDYSVEISETVSIGSFVGMVTAHSQSS 1699



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   + A +    + S   ++ VN+ D+NDNAP         + + +A
Sbjct: 3294 ENLDYESSH--EYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDA 3351

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI   +  G   F IDP  G ++ T KL+  E    
Sbjct: 3352 VLEQSVITVLADDADGPSNSHIHYSIIDGNQGG--PFTIDPVRGEVKVT-KLLDRETISG 3408

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3409 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLRLVVT 3468



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F V+AR  Q      ASV VS+ V   D NDN+P     P     ++      ++++I
Sbjct: 2777 YQFSVLARCTQDDREMVASVDVSIQVK--DANDNSPVFESSPYEAFIVENLPGGSRVIQI 2834

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N+++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2835 RASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKVVASD 2894

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2895 HGEKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2932



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R           S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3096 YHLLVRATDRGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3155

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3156 DSGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3212

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3213 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3255



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDNAP            +A      +V++ ATD+D   N  I+Y
Sbjct: 2264 TGAHAEVFVDIIVEDINDNAPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSV 144
             ++   +     F +D  +G+I     L     ++++I V+A D G    SS  IV V V
Sbjct: 2324 QLFGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDV 2383

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
                N   P+F+Q  Y+  +SE A
Sbjct: 2384 T-DLNDNPPLFEQQIYEARISEHA 2406



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2377 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2430

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2431 SI--LSGNDHKHFIIDSATGIITLSNLRRHTLKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2487

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2488 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2525



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 LDVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQ---TIVEVSVVPGPN 149
           T   KF ID  +GV++    L   +  E Y + ++A D   +  Q   T+V    +   N
Sbjct: 863 TDTDKFSIDSATGVVKIMHPLDRELQHEHY-LKIEARDQAREEPQLFSTVVLKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DL  + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLAQSGQVRYSLM---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVERGAVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1708 NTG-DAFDINPHSGSI-ITQKALDFETLPVYTLIIQGTNMAGLSTNTTVSVQL-QDENDN 1764

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            SPVF Q  Y   +SE ASINS V T
Sbjct: 1765 SPVFMQAEYTGLISESASINSVVLT 1789



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+  ++TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2514 VMEVKTTDGDSGIYGDVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2570

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2571 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2629



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +G+IET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGIIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P    P+     +    
Sbjct: 1837 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPLYEASLLLPTY 1896

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1897 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1954

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q  Y   V E ++   T+A IT
Sbjct: 1955 VRASD-GRFAGLTSVKINVKESKESHLK-FTQGVYSAVVKENSTEAKTLAVIT 2005



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  +++V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I+ I A D D     E    IY +  +     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILHISAVDQD-----EKNRLIYTLQGSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
           LTV++   N+ AP   +I  + +   E  R     IV ++  D D G N EI  S+  V+
Sbjct: 243 LTVHIEQANECAP---VITAVTLSPSELDRDPTYAIVTVD--DCDQGANGEIA-SLSIVA 296

Query: 95  NTGLHKFR-IDPRSGVIETTGKLIAGEQ-------YSITVQATDTGGKSSQTIVEVSVVP 146
              L +FR +    G  E   K I+G         Y++T+QA D G     + V+V  V 
Sbjct: 297 GDLLQQFRTVRSFPGSKEYKVKAISGVDWDSHPFGYNLTLQAKDKGTPPQFSSVKVIHVT 356

Query: 147 GPNTRS-PV-FQQNTYDVNVSEGASINSTVATI 177
            P  ++ PV F+++ Y   +SE A  N+ V  +
Sbjct: 357 SPQFKAGPVKFEKDVYRAEISEFAPPNTPVVMV 389


>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
          Length = 3117

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 21/201 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----- 55
           YL+V    LDR+      F   ++A ++           T++++D+NDNAPR        
Sbjct: 403 YLMVVNVPLDRE--RQANFTMTIMATDQGIPPLKTSKQFTLHISDVNDNAPRFTQSEYFA 460

Query: 56  -IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            IP    +  E    +V+I ATD D GVNA + Y + +  N     F+IDP SG++ TT 
Sbjct: 461 NIP----EVAEPGFSVVRIRATDRDEGVNAALRYELQNDINGW---FKIDPVSGIV-TTK 512

Query: 115 KLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             I  E      +TV A D G  S  +  +++V V   N   P+F Q+ Y+V V E A I
Sbjct: 513 SFIDCETNPSPVLTVVARDKGSPSLSSTAKLTVTVSDVNDNEPLFDQSYYNVTVPEDARI 572

Query: 171 NSTVATITVSRLASGC-AIMN 190
            + V  +  S    G  A++N
Sbjct: 573 GACVLKVAASDPDCGVNAVVN 593



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 14/151 (9%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATD 77
           V+AR+K   + S    LTV ++D+NDN P        +  P   + G     ++K+ A+D
Sbjct: 527 VVARDKGSPSLSSTAKLTVTVSDVNDNEPLFDQSYYNVTVPEDARIGAC---VLKVAASD 583

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + +++     T    FRID RSG +    KL   E+  Y I V ATD GG S
Sbjct: 584 PDCGVNAVVNFTL---GPTSSPSFRIDARSGELCIAAKLDREERSTYEIPVLATDRGGLS 640

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           + T+V+V V+   N   PVF    Y+V++ E
Sbjct: 641 TATVVKVHVL-DINDHRPVFNPVVYNVSLYE 670



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 19/192 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------ 55
             ++ + + DR     G+F+F V A + +    +  V +T+ + D NDN P  P+      
Sbjct: 2601 FLLKELDFDR----AGEFKFIVRATDTKNYVLASLVGVTIKVKDENDNPPVFPVTRYNES 2656

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--T 113
            IP    +A      I    A D D G    + Y+I  +      KF IDPRSG++ +   
Sbjct: 2657 IP----EASPIGTVIFTARANDRDRGHFGTLNYTI--LEGEAREKFSIDPRSGLVSSNIV 2710

Query: 114  GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                + + +  T+ ATD GGK++   V+V ++ G +   P F +  Y   V   A I  +
Sbjct: 2711 FDYESKKHHYFTIAATDAGGKTAHVQVQVDII-GKDEYPPEFLKPVYHFTVPGNAPIGYS 2769

Query: 174  VATITVSRLASG 185
            V  +  + + SG
Sbjct: 2770 VGRVEATDIDSG 2781



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            V  +E+LDR+  +   +  QV A +      S   ++ + ++D NDN P+    M     
Sbjct: 1028 VYLRESLDRETED--SYTIQVEAVDNGNPPLSASTTVFIAVSDANDNEPQFVRDMFEFAV 1085

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  E+ R + +I A D DLG NA I YS+  +SN  + +F I+P +G + T  +L   +
Sbjct: 1086 EENAESGRSVGEIRAIDKDLGDNAAIRYSL--LSN--IDEFSINPMTGEMHTKNRLDREK 1141

Query: 121  Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN 158
            +  Y   V+A D G   KSS+  V V V+   N  +P+F  N
Sbjct: 1142 RSNYECIVEAQDQGAKPKSSRVTVRVRVL-DKNDNAPLFADN 1182



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 16/160 (10%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            E +  +A+V +++T    D NDN P   R P    I+  A         +   D++ G N
Sbjct: 1900 ETRSHSATVHIAIT----DANDNKPIFVRYPFFAEIRADAQIGTHVEHVVAEDDDEEGRN 1955

Query: 84   AEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGG--KSSQ 137
            ++I YS    S +G+H   F I+P +G +    ++    G+   + + A+D G   KSS 
Sbjct: 1956 SDIIYSF---SESGVHSDYFHINPHTGEVTLARRVHKFEGKVLHLEIVASDQGEHPKSSV 2012

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++EV V    N     F Q  Y V +SE A+    + T+
Sbjct: 2013 GVLEVHVGTTSNEHQLQFLQERYTVEISESANYGMEILTV 2052



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-IEATDNDLG 81
            V A ++     S   ++ + + DINDN P  P   P++++       IV  +EA  ND+ 
Sbjct: 2210 VTASDEMSPPLSGTTTVLITIVDINDNQPVFPASDPVRVREDCKVGSIVTTVEA--NDVD 2267

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTI 139
                + YS+     TG   F +D  +G I  +  L    Q  YS+TV  TD G  +++T 
Sbjct: 2268 TFPPLVYSL----KTGESNFNVDAFTGAITLSKPLDFETQNNYSVTVMVTD-GAHTAETT 2322

Query: 140  VEVSVVPGPNTRSPVFQQNTYDV 162
            + + V+   N R+P+F   +Y V
Sbjct: 2323 LTIDVL-DVNDRTPIFSSTSYSV 2344



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 21/176 (11%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG 64
            +K  LDR+      +   V A+++     S  V++ V + D NDNAP   +    Q  + 
Sbjct: 1133 TKNRLDRE--KRSNYECIVEAQDQGAKPKSSRVTVRVRVLDKNDNAP---LFADNQETSF 1187

Query: 65   EARR------QIVKIEATDNDLGVNAEITYSIYHVSNTGLH----KFRIDPRSGVIETTG 114
              RR      ++ +I A+D D G NAE+   +Y +  TG      KF      G+I+T  
Sbjct: 1188 VLRRDEPAGSEVGQIRASDADEGTNAEV---VYELEATGFPTDGVKFFTINTDGLIKTKT 1244

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
            +L  G+Q  Y++ V A D G  S ++ V++ + +  PN +   F  +T    V EG
Sbjct: 1245 ELSQGKQKEYALRVVAKDLGSPSLESKVDIRITLQDPNDKLLSFYSSTVTFTVKEG 1300



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 13/181 (7%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQI 61
            +S + LDR+  +  ++   V+A+++          L + + D NDN P+       P   
Sbjct: 1770 LSCKALDRE--SASEYSLVVLAQDRGAPPKIGRCRLWITVMDQNDNDPQFEHSEYSPQVR 1827

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +  E   +++ + A D D   N E+TYS+ + +N+    F ID  +G I TTG+     +
Sbjct: 1828 EDAEIGTEVLMVNAHDIDEKNNGEVTYSLINATNS---LFSIDSETGRIYTTGQFDRENE 1884

Query: 122  --YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y++ V+A+D G    +S    V +++    N   P+F +  +   +   A I + V  
Sbjct: 1885 PRYTLEVRASDRGSYETRSHSATVHIAITDA-NDNKPIFVRYPFFAEIRADAQIGTHVEH 1943

Query: 177  I 177
            +
Sbjct: 1944 V 1944



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQA--GE 65
           LDR+      +   V+A ++ G + +  V   V++ DIND+ P   P++  + +     +
Sbjct: 619 LDRE--ERSTYEIPVLATDRGGLSTATVVK--VHVLDINDHRPVFNPVVYNVSLYEFYDQ 674

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI--AGEQY 122
             + IV + A D D G+N +++Y I      G H+ FRIDP SG I  T  L   +G  +
Sbjct: 675 TVQPIVVVVAEDRDEGLNGQVSYRIVE----GNHQLFRIDPDSGGIHVTSTLRRGSGSSH 730

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V A D  G  S+    V V V     + PVF    Y   V E
Sbjct: 731 HLVVSAQDGQGLRSEQNAHVYVSVLSERQKPPVFVSPRYVFAVRE 775



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 75/175 (42%), Gaps = 16/175 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRLPMIPPIQIQAGEARR---Q 69
            NP  F  QV A +  G   S    +TVN+   D NDN PR     PI     E       
Sbjct: 1356 NPS-FVLQVSASDGSGAPESRASIVTVNVRVEDTNDNPPRFAS-DPIVFSVSENTSPGSL 1413

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            +  I A D D G+N  + YSI   + +G   F IDP SGVI     L   +  QY   V+
Sbjct: 1414 LNAITAHDEDSGLNGLVRYSIIEPNGSGKPTFTIDPVSGVITLIEPLDYEKQAQYIFVVE 1473

Query: 128  ATDTGGK-----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D   +     SS+  V + +V   N  +P      Y V V E   +++ V TI
Sbjct: 1474 AQDQAREIELRLSSKVTVSL-LVEDENDNAPEIVSKPY-VQVPEDKQVDTVVTTI 1526



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 10/167 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIE 74
            + R  VIA +    A    ++L V + DINDN P        +I   ++ E   + +++ 
Sbjct: 935  QHRLTVIAEDGATPARRNNMTLLVEVQDINDNTPVFEY-ESYRISVEESMEVDTEFLRVT 993

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A D+D G NA +TY +   S      F I P +G +     L     + Y+I V+A D G
Sbjct: 994  AADSDSGNNARLTYRLVD-SPAASSTFGIYPNTGYVYLRESLDRETEDSYTIQVEAVDNG 1052

Query: 133  GK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                S+ T V ++ V   N   P F ++ ++  V E A    +V  I
Sbjct: 1053 NPPLSASTTVFIA-VSDANDNEPQFVRDMFEFAVEENAESGRSVGEI 1098



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            ++ V++ D+NDN P        + +        I ++ A D+DLG N EI YSI    N 
Sbjct: 1699 TVIVDVLDVNDNVPDFGESCYNLSVPENREWSFIHRLHAADDDLGENGEIVYSIEE-GNV 1757

Query: 97   GLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
            G + F I P SG +        +  +YS+ V A D G   K  +  + ++V+   N   P
Sbjct: 1758 G-NVFSIAPLSGNLSCKALDRESASEYSLVVLAQDRGAPPKIGRCRLWITVM-DQNDNDP 1815

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F+ + Y   V E A I + V  +
Sbjct: 1816 QFEHSEYSPQVREDAEIGTEVLMV 1839



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 17/184 (9%)

Query: 9   LDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRLPMIPPIQIQAGE 65
           LDR+  PN     F ++     G    +   L VN+   D+NDN P       +   A  
Sbjct: 192 LDREITPN-----FSLVIEAYDGGTPPLKGVLLVNITIQDVNDNQPIFSQGNYVATIAEN 246

Query: 66  AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
           A     ++++ ATD D G N E+ YSI    +     F IDP+SG I     L     E 
Sbjct: 247 ATVGTSVLRVLATDTDEGRNGEVRYSINRRQSDREQYFNIDPKSGEIFVNKPLDFETKES 306

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTVAT 176
           + + V A D G +  +T   VS+ +   N  +P    +F  +     + E A +   V  
Sbjct: 307 HELVVVARDNGLQPLETTTFVSIKISDINDNTPTISLIFLSDDASSRIREDAKVGDFVGR 366

Query: 177 ITVS 180
           I+VS
Sbjct: 367 ISVS 370



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 26/169 (15%)

Query: 33   ASVPVSL-----TVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGV 82
            + VP+S       +++ D+NDN+PR       M  P   +       +  + A D D G 
Sbjct: 842  SGVPLSFGHAQVNISILDVNDNSPRFESNFVRMSVP---ENSSLLSPVYFVHAQDADSGE 898

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQT-- 138
            N  I+YS+   S      F+++ RSG  +++ +      +Q+ +TV A D    + +   
Sbjct: 899  NGRISYSLAEES----ENFKVNERSGAIILKRSLDYELRQQHRLTVIAEDGATPARRNNM 954

Query: 139  --IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +VEV  +   N  +PVF+  +Y ++V E   +++    +T +   SG
Sbjct: 955  TLLVEVQDI---NDNTPVFEYESYRISVEESMEVDTEFLRVTAADSDSG 1000



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 20/158 (12%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSI 90
            ++ V VSL V   D NDNAP +   P +Q+ +  +    +  I A D D   N  I +++
Sbjct: 1486 SSKVTVSLLVE--DENDNAPEIVSKPYVQVPEDKQVDTVVTTILAVDKDSRENGRILFNV 1543

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--------AGEQYSITVQATDTGGKSSQTIVEV 142
                  G   FR++      ETTG+LI           +  + +   D G     T  ++
Sbjct: 1544 QGGDTFG--NFRLN------ETTGELILVRPLDLNQASEIVLNITVRDNGQPMHFTHQKL 1595

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             + V   +  +P+F Q  Y+ ++SEGA++ +    + V
Sbjct: 1596 QIKVRDSSDIAPLFLQKVYETSISEGAAVGTVFLRVAV 1633



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 25/159 (15%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            A +   +LT+++ D+ND  P         +  G    +++ + ATD D G N  + YS  
Sbjct: 2316 AHTAETTLTIDVLDVNDRTPIFSSTSYSVVLNGHQATKLLTVAATDADSGDNGRVKYS-- 2373

Query: 92   HVSNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSI--------TVQATDTGGKSSQTIV 140
                       ++P S ++   E +G+L   ++ S+         V   D G  + Q  V
Sbjct: 2374 -----------LEPPSELVKIDEWSGQLFLRDEISLRKSFVSYSNVIVRDLGSPARQASV 2422

Query: 141  EVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
             + +      + P  F +  Y + +SE A I + V  +T
Sbjct: 2423 PLRIQASSLAKKPYSFSEKNYTIQISESAPIGAQVFNLT 2461



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 14/147 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSN 95
            L VNL + NDNAPR       +    E RR+   +V++ A D D G +  + + I  +  
Sbjct: 2121 LEVNLRNENDNAPRFSQ-SSYEASVYEGRRRGESVVQVSAIDED-GEDQRLFFQI--IDG 2176

Query: 96   TGLHKFRID-PRSGVIETTGKLIAG--EQYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
               + F ID P SG+I+T   L     E Y + V A+D      S  T V +++V   N 
Sbjct: 2177 NHDNAFTIDPPSSGIIKTNTVLDREIRENYVLIVTASDEMSPPLSGTTTVLITIV-DIND 2235

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              PVF  +   V V E   + S V T+
Sbjct: 2236 NQPVFPASD-PVRVREDCKVGSIVTTV 2261


>gi|291221758|ref|XP_002730887.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
            kowalevskii]
          Length = 4161

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 14/180 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRLPMIPPIQIQAGE- 65
            LDR+    G +   V A ++ G   S   + TVN+  NDINDN+P   +         E 
Sbjct: 1710 LDREAR--GDYELTVTASDRDGLEGSRDATATVNVTVNDINDNSPEF-LQSSYDFNVAEN 1766

Query: 66   --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  I  + A D+D+G+N  +TY +   ++ G  KF ID ++G I T  KL       
Sbjct: 1767 ASIHTTIGVVHAGDDDIGINGRLTYIL---TSGGQGKFGIDYKTGEIFTLDKLDYENTVV 1823

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            YS+ V  +D G    Q  V+V++ V   N   P F ++ Y  NV+E  ++NS V T+ V+
Sbjct: 1824 YSLNVSVSDGGEHVLQDWVDVTIRVSDVNDNYPAFTRDVYVGNVTENLAVNSDVLTVLVT 1883



 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 21/185 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ--- 62
             ++LD +  +  K+ FQV A ++     +    + + + D+NDN P    + P+      
Sbjct: 1600 NQSLDYEDGDNRKYTFQVFAADRGDVIKTSTAMIIIYVVDVNDNEPDF--VEPVFYGNID 1657

Query: 63   ----AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
                AG     I  + ATD D G NA I YS+      G   F I+ R+GVI  TG L  
Sbjct: 1658 ESSVAGTTVIMIRDVMATDLDNGPNASIIYSL-----DGGVPFSINERTGVITATGLLDR 1712

Query: 118  -AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             A   Y +TV A+D     G + +   V V+V    N  SP F Q++YD NV+E ASI++
Sbjct: 1713 EARGDYELTVTASDRDGLEGSRDATATVNVTV-NDINDNSPEFLQSSYDFNVAENASIHT 1771

Query: 173  TVATI 177
            T+  +
Sbjct: 1772 TIGVV 1776



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 11/179 (6%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVS--LTVNLNDINDNAPRLPMIPPIQIQAGE 65
           NLDR+  +  ++   V A ++ G   S+  S  L + +ND+ND  P         +    
Sbjct: 759 NLDREAID--QYELVVTACDRNGLDGSLNTSAYLYIQINDVNDEIPAFDDYHNFTVSEHA 816

Query: 66  ARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
               +V ++ A DND G+NA +TYS+  VS +G  KF +DPR+G I    +L       Y
Sbjct: 817 DIGHVVGRVRAFDNDTGINARLTYSV--VSGSG-GKFDVDPRNGAIFVASQLDREHTMTY 873

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + +  +D+G    Q   EV + V   N  SP F  + Y  +V E     + + T+T S
Sbjct: 874 ILKLSVSDSGVNILQDFTEVEIQVLDVNDNSPTFTSDIYVADVEEELPSGTYLFTVTAS 932



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 18/197 (9%)

Query: 3    VVSKENLDRDPPNP---GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            + +  N+DR+  +     K+   V+A++      +    + + + D+NDN P+     P 
Sbjct: 3297 IYANSNIDREYNSSYCNTKYTMTVMAQDNGSPQLNSTTGVEITVLDVNDNVPKFNQSVPY 3356

Query: 60   QIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            +    E       IV + ATD+D G NA I+Y+I  VS  G    RI+P SG+I+ T   
Sbjct: 3357 KGWVEENALYSVDIVTVSATDDDEGDNARISYAI--VSG-GDDAVRINPDSGLIQPTWNA 3413

Query: 117  ------IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                    G  Y++ +QATD G    SS+ IV + V+   N  +P F  N+Y   VS   
Sbjct: 3414 QIDYEDTEGRNYTLIIQATDAGNPPLSSKAIVHIYVID-VNDNTPYFMSNSYVAEVSMDE 3472

Query: 169  SINSTVATITVSRLASG 185
             ++  V T+      SG
Sbjct: 3473 PVDYLVITVLAVDSDSG 3489



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 19/184 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGE 65
            LD +      + FQV A ++     +  V + V + D NDNAP          I+  +G 
Sbjct: 966  LDYEDEENRIYEFQVFASDQGEIPMTSSVLVKVYVFDTNDNAPIFTQHVYYGNIEENSGP 1025

Query: 66   ARRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQ 121
                I+   I A+D D G+N+ I YSI   S     +FRID ++GV+ET  +G L    +
Sbjct: 1026 GTTVIMTRDILASDVDQGLNSSIVYSI---SGNNSDQFRIDNKTGVLETSNSGNLDLDRE 1082

Query: 122  ----YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                Y I + A D     G +++   + V+ V   N  +P F+   Y  + SEGA++  +
Sbjct: 1083 TVDFYEIILTAFDRNGMEGSRNTSVFIHVT-VNDDNDNNPAFEDTLYTFDTSEGANVGDS 1141

Query: 174  VATI 177
            V +I
Sbjct: 1142 VGSI 1145



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAAS----VPVSLTVNLNDINDNAPRLP-MIPPIQI-Q 62
            LDR+      +  +VIA ++  TA S    VPV +T++  D+NDN P    ++    + +
Sbjct: 1396 LDREVK--ALYELRVIAFDRDMTAGSLNTSVPVHITIS--DVNDNRPSFDGLLYYFTVRE 1451

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGE 120
              E    I    A D+D  +N+ +TYSI  +  +G  KF I P +G I    KL   + E
Sbjct: 1452 DAEIGYSIGNASAVDDDASINSRLTYSI--IDGSG-GKFNIHPNTGDIFVLSKLDRESEE 1508

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y I +  +D+G +  Q    V + +   N  +P F  N Y   V E     + + T+T 
Sbjct: 1509 TYIINITVSDSGVEILQDFATVQIQLLDVNDNTPAFDSNIYVAEVEEELPSGTYLFTVTA 1568

Query: 180  SRLASG 185
            +   +G
Sbjct: 1569 TDPDAG 1574



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 45   DINDNAPRLPMIPPI-QIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D+NDN P       + ++   E     ++ + A D+D G N  ITY+      T +  F 
Sbjct: 3451 DVNDNTPYFMSNSYVAEVSMDEPVDYLVITVLAVDSDSGENGRITYT------TNVEYFH 3504

Query: 103  IDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD 161
            +D  +G I    +L   + ++ TV A+D G        EV++ V   N  +PVF Q  Y 
Sbjct: 3505 LDNETGEITIQKELDTSKDFTFTVNASDNGTPVKWNTTEVTISVKETNIYAPVFDQTFYS 3564

Query: 162  VNVSEGASINSTVATITVSRLASG 185
            ++V+E       V T+T +   +G
Sbjct: 3565 LSVTENVPAGEHVVTVTATDRDAG 3588



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 12/191 (6%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAAS--VPVSLTVNLNDINDNAPRLP--MIPPIQIQA 63
            NLD D      +   + A ++ G   S    V + V +ND NDN P     +      + 
Sbjct: 1076 NLDLDRETVDFYEIILTAFDRNGMEGSRNTSVFIHVTVNDDNDNNPAFEDTLYTFDTSEG 1135

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
                  +  I A D D+ +NA +TYS+   S+    KF +D  SG I     L       
Sbjct: 1136 ANVGDSVGSIHADDEDIDINARLTYSVIGGSDG---KFVVDADSGEILVASNLDRETKSA 1192

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y+I +  +D+G    +   EV + V   N  +P F  + Y  NV E  +  + + T+T S
Sbjct: 1193 YTINMSVSDSGEVIRRNFTEVHIQVIDTNDNTPEFDTDFYLSNVEEELTSGTYLFTVTAS 1252

Query: 181  --RLASGCAIM 189
               + S C I+
Sbjct: 1253 DPDVGSNCDIV 1263



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 16/179 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASV--PVSLTVNLNDINDNAPRLPMIPPIQIQAGE- 65
           LD D      +   V A +  G   ++   +S+ + ++D+NDN P        + +  E 
Sbjct: 436 LDLDREIQDTYELTVTAADMGGDVDNLNTTISIVIYISDVNDNTPEFNE-TSYEFELDED 494

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGE-- 120
                 I  + A D D+G+N  + YS    +  G H  F ID  SG +  TG L      
Sbjct: 495 TPVNYVIGTLIAEDYDIGLNGRVLYS----TVDGSHGDFDIDTYSGDLFVTGILDRESIP 550

Query: 121 QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y I + A DTG     S T+V + ++   N  SPVF  + Y  ++ E A ++S V T+
Sbjct: 551 SYVINISAYDTGNPILESYTVVIIDILD-INDNSPVFSSDLYIGSIEESAQLDSYVLTV 608



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 26/148 (17%)

Query: 41  VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ DINDN+P       I  I+ ++ +    ++ + ATD+D G+NA ++Y       T 
Sbjct: 574 IDILDINDNSPVFSSDLYIGSIE-ESAQLDSYVLTVRATDDDDGINANVSYY------TS 626

Query: 98  LHKFRIDPRSGVI---------ETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVP 146
              F IDP +G I         E  GKL     Y  TV A D G    +S + V V ++ 
Sbjct: 627 SSDFSIDPITGDITTNSTDYDFEDNGKL----NYEFTVYANDQGIPALTSSSSVRVQILD 682

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  +P F ++ Y  N+ E +  ++TV
Sbjct: 683 S-NDNAPQFTESAYYGNIDENSLSDTTV 709



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 13/115 (11%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-------GEQYSIT 125
           IEATD D+ +NA + YS+   S  G  +F+ID  +G+I T              + Y +T
Sbjct: 393 IEATDADIDLNAAVVYSL---SGDGSDQFQIDEITGIITTADNENVLDLDREIQDTYELT 449

Query: 126 VQATDTGGKSSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V A D GG        +S+V      N  +P F + +Y+  + E   +N  + T+
Sbjct: 450 VTAADMGGDVDNLNTTISIVIYISDVNDNTPEFNETSYEFELDEDTPVNYVIGTL 504



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 16/179 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQ 62
            LD +  +   + F V A ++   A +    + + + DINDNAP          +    + 
Sbjct: 1286 LDFEDEDNRIYEFYVFATDQGEPALTSSAFVKIQVVDINDNAPDFTEHFYHGNVDENSV- 1344

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-- 120
            AG     +  I ATD D G+NA I   IY +   G  +F ID R+GV+ T    +  E  
Sbjct: 1345 AGTTVNMLRSILATDEDQGMNASI---IYQLDGDGSDQFLIDERTGVMTTKTSSLDREVK 1401

Query: 121  -QYSITVQATD---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Y + V A D   T G  + ++     +   N   P F    Y   V E A I  ++ 
Sbjct: 1402 ALYELRVIAFDRDMTAGSLNTSVPVHITISDVNDNRPSFDGLLYYFTVREDAEIGYSIG 1460



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 27/194 (13%)

Query: 4   VSKENLDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPP 58
           ++  + D D  + GK  + F V A ++   A +   S+ V + D NDNAP+         
Sbjct: 639 ITTNSTDYDFEDNGKLNYEFTVYANDQGIPALTSSSSVRVQILDSNDNAPQFTESAYYGN 698

Query: 59  IQIQAGEARRQIVK--IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           I   +      I+   IE +D D G+NA I Y++   +  G  +F+ID  SG+I T+   
Sbjct: 699 IDENSLSDTTVIIDRFIEVSDADTGLNAAIVYTL---AGEGSDQFQIDNISGIITTSDND 755

Query: 117 IAG-------EQYSITVQATDTGG------KSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
            A        +QY + V A D  G       S+   ++++ V   N   P F  + ++  
Sbjct: 756 TALNLDREAIDQYELVVTACDRNGLDGSLNTSAYLYIQINDV---NDEIPAF-DDYHNFT 811

Query: 164 VSEGASINSTVATI 177
           VSE A I   V  +
Sbjct: 812 VSEHADIGHVVGRV 825



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 24/168 (14%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--------QIVKIEATDNDLGVNAEITY 88
            V + + + DINDN P   +        GE            I+++ ATD D+  NA I Y
Sbjct: 3219 VHVQIEITDINDNNPVFTL----SWYTGEVNEGNYTNMNTYILQVTATDTDIDENAGIEY 3274

Query: 89   SIYHVSNTGLHK-FRIDPRSGVIETTGKL-------IAGEQYSITVQATDTGG--KSSQT 138
            SI   +N  L+  F I+P +G I     +           +Y++TV A D G    +S T
Sbjct: 3275 SITDGNNGKLYGVFAIEPTTGYIYANSNIDREYNSSYCNTKYTMTVMAQDNGSPQLNSTT 3334

Query: 139  IVEVSVVPGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVSRLASG 185
             VE++V+   N   P F Q+  Y   V E A  +  + T++ +    G
Sbjct: 3335 GVEITVLD-VNDNVPKFNQSVPYKGWVEENALYSVDIVTVSATDDDEG 3381



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEA 66
           LDR+      F   VI  + +    S+PV   VNL D+ND  P    I      I    A
Sbjct: 111 LDREVMGTYAFTVTVIGCQFE---KSIPVQ--VNLIDLNDETPAWSTIQYYAEWIDGTVA 165

Query: 67  RRQIVKIEATDNDLGVNAEITYSI 90
              I  + ATD+DL  N EITY +
Sbjct: 166 ATTIAVLYATDDDLAENGEITYVV 189



 Score = 36.2 bits (82), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 17/155 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQ----VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP 57
            LVV +  +DR+     +F++     VI  E   T   +PV   V++ DINDN P    I 
Sbjct: 2351 LVVGESRIDRE-----EFKYIQLTIVILSETNTTIKYIPVH--VDVVDINDNRPEFSRIS 2403

Query: 58   -PIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETT 113
              + I +       IV + ATD D G N E+++ I   H +   +    +  R  +I   
Sbjct: 2404 YSVNISEHSPVDTFIVPVYATDADSGTNGEVSFYIAEPHNNTFWMDNNNLRSRYELILND 2463

Query: 114  GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
            G   + +  +I + A D G   S     V ++  P
Sbjct: 2464 GNYASHQ--TIYIYAMDKGNVVSSVYASVDLLIHP 2496



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 20/151 (13%)

Query: 45   DINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D NDN P       +     E  +   +  + A+D D+G N +I +S+  +       F 
Sbjct: 1219 DTNDNTPEFDTDFYLSNVEEELTSGTYLFTVTASDPDVGSNCDIVFSLDTL------DFA 1272

Query: 103  IDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
            I+  +G I T+  L   ++    Y   V ATD G    +S   V++ VV   N  +P F 
Sbjct: 1273 INDTTGEISTSTSLDFEDEDNRIYEFYVFATDQGEPALTSSAFVKIQVVD-INDNAPDFT 1331

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASGCA 187
            ++ Y  NV E     ++VA  TV+ L S  A
Sbjct: 1332 EHFYHGNVDE-----NSVAGTTVNMLRSILA 1357



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 20/166 (12%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVK----IEATDNDLGVNAEIT 87
            ++   L + + D NDN P          +I    + R  V     I +TD D G NA   
Sbjct: 2805 AIIAELNITVLDENDNHPSFSKTQGYHGEIMENPSYRMEVHMPHPIMSTDGDYGFNAS-- 2862

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-------GEQYSITVQATDTGG---KSSQ 137
             +IY +S  G  +F+ID ++GVI  T             ++Y + V  +D  G    S  
Sbjct: 2863 -TIYTLSGDGHEQFKIDGKTGVITATDDESVLDLDREKRDRYDLEVIVSDRDGVDDLSLS 2921

Query: 138  TIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            T V +++V    N   P F  N Y   + E  + +  +  I+ + +
Sbjct: 2922 TSVPLTIVLLDVNDNYPQFSHNEYYYEIFENTTSSYKIGVISATDI 2967


>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
 gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
          Length = 1852

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            LV +K  LDR+  +   +  +V A +    + S   ++T+ +ND+NDN+P+       + 
Sbjct: 1154 LVTTKRPLDRE--DQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLT 1211

Query: 61   IQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +    A    I+++ A+D D G N  +TYSI  +S    + FRID  +G I   G +   
Sbjct: 1212 VTENTANGSNILRVLASDPDAGANGRVTYSI--ISGNHGNAFRIDSTTGRITVVGVVDRE 1269

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            A   Y++T+ A D+G     +   V++ V   N  SP+F  N     + EG SI S VA 
Sbjct: 1270 ALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAV 1329

Query: 177  ITVSRLASGC 186
            +T +    G 
Sbjct: 1330 VTATDRDEGS 1339



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 6/176 (3%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQI 70
           D  +  ++R  V+A++           + +++ D NDNAP  P+   +  I+      Q+
Sbjct: 29  DRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV 88

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
             + ATD D G NA ITYS++    +G +KF ++ ++G I T   L    + S T++ + 
Sbjct: 89  AIVTATDRDSGTNAAITYSLF----SGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISA 144

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             GK + T V +  V   N  +P F  + Y   V E  ++ S V  +T   L  G 
Sbjct: 145 FDGKHT-TFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGI 199



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 10/147 (6%)

Query: 39   LTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LTV +ND+NDN P       I  ++  + ++   ++ + A D+D+G NA + YSI  +S 
Sbjct: 1398 LTVVVNDVNDNPPVFNSQSYIGSVRENSAQST-SVLTVAADDSDVGANAVLRYSI--ISG 1454

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                +F+I+  SGVI TT  L   E  QY + V ATD+   +++T V + V+   N  +P
Sbjct: 1455 NDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS-KYTAKTNVTIRVI-NLNDITP 1512

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F Q  Y  +V E +  +++V  ++ S
Sbjct: 1513 AFTQQNYTASVRENSPTSTSVVKVSAS 1539



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 10/190 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L+   + LDR+      +   V A E      SV  + T+ + D+NDNAP   P      
Sbjct: 1050 LISVAKRLDRE--TTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKS 1107

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +       Q V K+ ATD D G NA++TY +  V +T   KF ++P +G++ T   L   
Sbjct: 1108 LHENLPIGQTVAKVTATDRDEGENAKVTYEL-SVGDTS--KFEVNPATGLVTTKRPLDRE 1164

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            +Q  YS+ V A D G  S   +  +++ +   N  SP F Q+ Y + V+E  +  S +  
Sbjct: 1165 DQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILR 1224

Query: 177  ITVSRLASGC 186
            +  S   +G 
Sbjct: 1225 VLASDPDAGA 1234



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L +N+NDINDN P   +  P   Q +  E      ++ ATD D   N  + + I   ++ 
Sbjct: 362 LLINVNDINDNPP---VFSPSAYQSRVKENTPAGTQVSATDRDSSTNGALVFGIIKGNDD 418

Query: 97  GLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
           G+  F ID  +G+I            +Y +TVQA D G        +V++ +   N  SP
Sbjct: 419 GV--FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSP 476

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF  + Y   + E   I STV T+T + L SG
Sbjct: 477 VFSPSNYSKQIPESTVIGSTVVTVTATDLDSG 508



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQI 61
           VS E LDR+      +  QV AR+   T+ S    +T+ L DINDN+P    P +  +  
Sbjct: 537 VSSE-LDRE--TTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVS- 592

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE- 120
           ++     QI ++ ATD D   N ++ Y++    NT +  F I+  +G+I    +L   + 
Sbjct: 593 ESSSPGHQIGQVAATDADDSSNGDVRYALSD--NTDV--FSINTSTGLITLKTQLDYEKK 648

Query: 121 -QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QY +TV A D G   +SS T+V+V +V   N   P F ++ Y   V E  +    V  +
Sbjct: 649 TQYMVTVTAKDGGTPSRSSLTVVKV-MVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYV 707

Query: 178 TVSRLASGC------AIMNKEEN 194
           T +   SG       +I++  EN
Sbjct: 708 TATDADSGANGKISYSILSGNEN 730



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
           + +      G+      + TVN++  D NDN P         I +      ++ ++ ATD
Sbjct: 756 YSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRFNISEDSPTGTRVGQLTATD 815

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG-- 133
            D+G N  +TY+I  +S    + F++DPRSG++     L       Y++ V+A+D G   
Sbjct: 816 RDIGPNGAVTYAI--ISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQ 873

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +S    + VSV+   N  +P F+++ +   + E AS++STV  + V
Sbjct: 874 QSITASIHVSVLD-VNDNAPRFEKSLFSGEIREDASVHSTVLQVKV 918



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 11/151 (7%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGL 98
           + ++D+NDNAP   + +    +    A   IV+ + A D D+G+NA ++YS+  VS    
Sbjct: 156 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSL--VSGDTS 213

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV 154
           + F +D + GVI T G         Y + ++A D G   +S Q  VE+ ++   + R PV
Sbjct: 214 Y-FTVDSQ-GVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNR-PV 270

Query: 155 FQQNTYDVNVSEGASINSTVATITVSRLASG 185
           F    Y  +V E  +I + + T+T S   +G
Sbjct: 271 FSSAQYTASVDEDVAIGAAMVTVTASDKDNG 301



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  N   +   + AR+      +  +++ V + DIND+ P   +I    ++      
Sbjct: 1677 LDRE--NKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP---LINSSSLRGSVREN 1731

Query: 69   Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
            Q     +++I A+D D G+NAE+T+S+  +SN     F +D  +G I T   L   +Q  
Sbjct: 1732 QPKETHVMRILASDADTGLNAELTFSL--LSNEHKSVFTLDNTTGDISTKVPLDREQQAV 1789

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASI 170
            Y++ +   D G  S  ++ +V + V   +   P FQ   Y+V +SE    GASI
Sbjct: 1790 YTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASI 1843



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVNAEIT 87
            S+  S+ V++ D+NDNAPR        + +GE R        +++++  D D G N  IT
Sbjct: 875  SITASIHVSVLDVNDNAPRFEK----SLFSGEIREDASVHSTVLQVKVEDKDEGSNGAIT 930

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKSSQTIVEVSV-V 145
             S+   S  G   F ID    V+  T         Y +TV A D G  S     +V + +
Sbjct: 931  LSL---SGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITI 987

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P F       ++ E  +IN+ V  +
Sbjct: 988  INVNDNVPSFVSPAQVTSIPEDVAINTHVVKL 1019



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 27/179 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPI 59
           ++ +K   DR+     K  +QV  R + G + S     TV +   D+NDN P        
Sbjct: 222 VIRTKGAFDRET----KASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYT 277

Query: 60  -----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
                 +  G A   +V + A+D D G NA++ YS +   NT  H F +D  +GV+ T  
Sbjct: 278 ASVDEDVAIGAA---MVTVTASDKDNGNNADLRYS-FTSGNTN-HAFTLDAVTGVV-TVS 331

Query: 115 KLIAGEQ---YSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           + +  EQ   Y++ +  TD G      +S  ++ V+ +   N   PVF  + Y   V E
Sbjct: 332 RSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDI---NDNPPVFSPSAYQSRVKE 387



 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
            ++  + ATD D G NA++ YSI     +    F I+  +GV+ T  K I  E    Y++T
Sbjct: 1326 RVAVVTATDRDEGSNAQVFYSIVRGDTSA---FAINAMNGVL-TVKKEINRETVPTYTLT 1381

Query: 126  VQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++A+D G     +  E++VV    N   PVF   +Y  +V E ++ +++V T+
Sbjct: 1382 IRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTV 1434



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQ 69
           D  N  ++   V AR++          +T+ + D+ND++P   P     QI ++      
Sbjct: 437 DYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGST 496

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +V + ATD D G    + Y +  +S      F ID  SG I  + +L       YS+ V+
Sbjct: 497 VVTVTATDLDSGPRGRLEYRL--ISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVE 554

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
           A D G  S  +   V++ +   N  SP+F Q  Y   VSE +S
Sbjct: 555 ARDGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRVSESSS 596


>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial
           [Apis florea]
          Length = 2820

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 17/187 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
           ++++E LDR+    G     + AR+ QGT   AA VP+ +TV   D+NDN+P +  P   
Sbjct: 611 IITREPLDRE--TKGVHELVLEARD-QGTPSRAARVPLKITVL--DVNDNSPEIVDPQGD 665

Query: 58  PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
            + ++  +    ++ ++ A D DLG NA +TY+I    ++ G + F +DP +G+I T   
Sbjct: 666 VVSVREEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTVDPITGMIRTKAV 725

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
           L   E+  Y ++V+ATD G     +I  + V V+   + R P F  ++   NV E ASI 
Sbjct: 726 LDHEERNVYRVSVKATDAGRPPRHSIRALRVEVLALADNR-PTFTSSSLTFNVREDASIG 784

Query: 172 STVATIT 178
             V +++
Sbjct: 785 QAVGSVS 791



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
            +V +   LDR+      + F V+A +       ++++PV + V+  D+NDNAP     P 
Sbjct: 1380 VVTTAGALDRE--RQSAYNFVVVATDGGKYDARSSTIPVEIRVS--DVNDNAPVFEEYPF 1435

Query: 58   PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
              ++  G +  + I+++ ATD D G N EI YS  H       KFRI P +G +     L
Sbjct: 1436 RARVSIGTQPEKNILRVVATDIDEGANGEIVYSFLHEQEK--PKFRIHPSTGAVTAALSL 1493

Query: 117  IA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASI 170
                G+ Y + V A D G   +S++ ++E+ V    +  +PV  FQ  TY+V V E  + 
Sbjct: 1494 SQDNGKTYHLEVVARDKGNPPRSARGLIELRVGDLADL-APVLKFQNETYEVVVGENCAA 1552

Query: 171  NSTVATITVSR 181
             + V  +T  R
Sbjct: 1553 GTEVIRVTAVR 1563



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 16/145 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V L D+NDN+P+ P +P      GE       +    A+D D G+   + YSI   + 
Sbjct: 2186 LRVRLEDVNDNSPKFP-VPEYLEFVGENEPIGTTVFSARASDLDRGIFGSLNYSIVSAAA 2244

Query: 96   TGLHK-------FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
            TG          F +D +SG + TT  +   E   +Y+ T++ATDTGG+++   V V  +
Sbjct: 2245 TGFSDIDDSWRLFAVDGKSGTV-TTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVE-I 2302

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   P F +  Y   +  GA I
Sbjct: 2303 ESRDEFYPQFTERMYRFGMRSGARI 2327



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 15/182 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  K+   V AR    T       + +N+ D+NDN P  P    ++I   E+  
Sbjct: 313 LDRETRD--KYILSVEARNGVSTGY---CQVELNVEDVNDNGPTFPA-SSVRISVAESHP 366

Query: 68  --RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               +    A D D+     I Y++   SN     F ID RSG +  + +L    Q  + 
Sbjct: 367 LHAPLYVAHAVDPDVVPPHPIRYALGQNSN---DLFGIDARSGELYLSRRLDYETQQRHG 423

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + ++A D GG ++   + V V    N   PVF++N Y V V EGA ++S +  +T   L 
Sbjct: 424 LLIRAVDGGGLTANLSLSVEV-QDVNDNPPVFERNEYHVEVPEGAKLDSQILQVTAVDLD 482

Query: 184 SG 185
           +G
Sbjct: 483 TG 484



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 60/232 (25%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
            +S  NLDR+  +  K+   + A++K   +     +LTV + D+NDNAP       +Q + 
Sbjct: 1241 LSMSNLDRE--SVSKYVLTISAKDKGRPSLEARCNLTVIVLDVNDNAPTF-----VQNEY 1293

Query: 64   GEARRQ--------------------------------------------IVKIEATDND 79
             E+R +                                            ++ + ATD D
Sbjct: 1294 SESRARGSAVATAEYPAFGFPYGSSSNYPTSHRPTKYVATVSEDVAPDSSVMTVRATDPD 1353

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GK 134
             GVN +ITY+I   ++     FR+D  +GV+ T G L    Q  Y+  V ATD G    +
Sbjct: 1354 QGVNGKITYAIAEETS---WLFRVDNLTGVVTTAGALDRERQSAYNFVVVATDGGKYDAR 1410

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            SS   VE+  V   N  +PVF++  +   VS G      +  +  + +  G 
Sbjct: 1411 SSTIPVEIR-VSDVNDNAPVFEEYPFRARVSIGTQPEKNILRVVATDIDEGA 1461



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 9/189 (4%)

Query: 13   PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-I 70
            P    K    V AR          V L V ++D NDN P          +  G  +   +
Sbjct: 1643 PRESSKHVLTVAARTSGPDPLEAYVKLVVRVSDANDNPPVFTQTQYSATVLEGNVKGDFV 1702

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG--EQYSITVQ 127
            VK+ A+D D G+N  + Y I  V     + F I  P SG++ T   L     E+Y +T+ 
Sbjct: 1703 VKLSASDADQGMNGRVLYHI--VDGNPDNAFTISPPYSGIVRTNIVLDREIREKYRLTII 1760

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            ATD G         +SV V   N   P F +++  ++VSEG ++ + + TIT + + S  
Sbjct: 1761 ATDQGNPQLTGTAALSVRVIDINDNQPTFPEHSV-ISVSEGTAVGTVLTTITANDVDSSP 1819

Query: 187  AIMNKEENS 195
            A+  +  N+
Sbjct: 1820 ALTYRFGNA 1828



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 1754 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPEHSVISVSEGTAVGTVLTT-ITA 1812

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  +TY   + ++ G   F ID   G +    +L A    +YS+ V A+D  G  
Sbjct: 1813 NDVDSSPALTYRFGNATDPG--PFSIDRYGGKVVLRRRLDAETRSEYSLQVVASD--GIH 1868

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              T   +  V   N  +P FQQ+ Y   + EG
Sbjct: 1869 EATTDLIVRVTDLNDNAPRFQQSAYIATLPEG 1900



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 11/173 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPI 59
            LV  +  LDR+     ++   ++AR  +        +L V + D NDN+P  R      +
Sbjct: 1138 LVTLRGPLDRE--EASRYSVPILARSSKLLDIG---TLEVVVMDENDNSPEFRPGSCYTL 1192

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-KLIA 118
             +   +    I  I A+D D G N E  YSI    N G  KF +DP SG +  +     +
Sbjct: 1193 AVPENQGTAVIHTIAASDLDEGKNGEFXYSIVG-GNVGA-KFALDPTSGALSMSNLDRES 1250

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
              +Y +T+ A D G  S +    ++V V   N  +P F QN Y  + + G+++
Sbjct: 1251 VSKYVLTISAKDKGRPSLEARCNLTVIVLDVNDNAPTFVQNEYSESRARGSAV 1303



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           +V   +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDN PR P   PI 
Sbjct: 824 LVVAHSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIAIEDANDNPPRWPQ-DPIT 880

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       I  + A D D G+N ++ Y +          F +D  +G +     L 
Sbjct: 881 VRVSERAAIGSTIYNLTAIDLDSGLNGDLRYGLV-AEFPSRDSFAVDSLTGALTLAKPLD 939

Query: 118 AGE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
             E  +Y++ ++A+D    G + + T+    +V   N   PVF
Sbjct: 940 REERAEYTLILRASDRAPPGERLASTVTARIIVLDQNDNDPVF 982



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 24/200 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLPM-I 56
            L++SK  LDR+  +  K+  ++ ++ +  T  S+    PV++ V + D NDN PR    +
Sbjct: 2039 LILSKP-LDRETKD--KYVLRLGSKNESTTTGSLVGDEPVTVIVTVEDANDNYPRFTEDV 2095

Query: 57   PPIQIQAGEARRQIVKI-EATDNDLGVN--AEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              + I+   AR   V +  A D DL     A + Y I   ++ GL  FR+D  +G +   
Sbjct: 2096 HQVSIKENAARGATVAVLRANDEDLAGTPAATLVYEITSGNDGGL--FRVDRSTGAVLVN 2153

Query: 114  GKL---IAGEQYSITVQATDTGGKS-----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
              L   +  + +++ V A DT   S     ++  V +  V   N  SP F    Y   V 
Sbjct: 2154 ATLDCDLEPDVHNLVVMACDTDPDSPLCALTRLRVRLEDV---NDNSPKFPVPEYLEFVG 2210

Query: 166  EGASINSTVATITVSRLASG 185
            E   I +TV +   S L  G
Sbjct: 2211 ENEPIGTTVFSARASDLDRG 2230



 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 15/163 (9%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATD 77
           VIA ++ G +    V   V + D+NDN P   +  P +  A        +  I+++ ATD
Sbjct: 55  VIATDRGGLSTVAIVR--VQVTDVNDNRP---IFEPRRYNATLKADNTIQGAILRVVATD 109

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQYSITVQATDTGGKS 135
            D G+  ++ Y I   +  G+  F+ID  +G +E      L     + + V ATD  G  
Sbjct: 110 LDAGLFGQVAYRITSGNEAGV--FQIDRNTGEVEVARPAFLSRSPLHQLNVTATDAAGLK 167

Query: 136 SQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           S    E+ +    P  R    ++  Y + V E    NS V  +
Sbjct: 168 SMLDAEIRITASSPGHRIASCEKPRYTITVKETVPQNSVVGGV 210



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI 59
            VV +  LD +     ++  QV+A +    A +    L V + D+NDNAPR      I  +
Sbjct: 1843 VVLRRRLDAE--TRSEYSLQVVASDGIHEATT---DLIVRVTDLNDNAPRFQQSAYIATL 1897

Query: 60   QIQAGEARRQIVKIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                G   ++IV + ATD+DL   N+ + Y +   +      F + P +GV+      I 
Sbjct: 1898 PEGRGGELQEIVTVNATDDDLTEENSRVRYHLLRATK----GFSVHPVTGVVTVNRTAIP 1953

Query: 119  G---EQYSITVQATDTGGKSSQTIVEVSV 144
                ++  + V A D G   + ++  V V
Sbjct: 1954 RPLPKEVELAVVAEDYGKPPASSVCSVVV 1982


>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
          Length = 4343

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2962 WRIFSRKTLDRE--HTAKYLLRITASDGK-FQASVPVEIFVL--DINDNSPQCSQL---- 3012

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            + AGE          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3013 LYAGEVSEDVPPGHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGELTTLT 3069

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L     + YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3070 ALDREKKDAYSLVAKATDGGGQSCQADV-ILHVEDVNDNAPRFFPSHSAVAVFDNTTVKT 3128

Query: 173  TVATI 177
             VA +
Sbjct: 3129 PVAVV 3133



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 27/193 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ +   LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1189 LLATARQLDRE--NKDEHILEVTVLDNGEPSLRSTSRVVVRIVDVNDNPPVFSHKLFNVR 1246

Query: 53   LP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
            LP  +IP     +G   R +    A+D D G+N  +TYSI      G   F IDP +GV+
Sbjct: 1247 LPERLIPGT---SGPVYRLV----ASDLDEGLNGRVTYSIEESDEAG---FSIDPVTGVV 1296

Query: 111  ETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSE 166
              +    AGE   +TV+ATD G    S+   + +  +P P   S P+ F ++ Y   V E
Sbjct: 1297 SASSTFTAGEYNILTVKATDGGQPPLSASVRLHIEWIPKPRPSSIPLAFDESHYSFAVME 1356

Query: 167  GASINSTVATITV 179
               +N  V  I+V
Sbjct: 1357 TDPVNHMVGVISV 1369



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 10/168 (5%)

Query: 20   RFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEAT 76
             F  I   ++G+++ S   ++ VN+ D+N++ PR P  +     ++       ++ + AT
Sbjct: 3285 HFLSIECSRKGSSSLSDMTTIVVNITDVNEHQPRFPQHLYSTRVLENAIVGDVVLTVSAT 3344

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG 133
            D D  VN+ ITYS+  +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G 
Sbjct: 3345 DEDGPVNSAITYSL--IGGNQLGHFAIHPKKGELQ-VAKALDWEQTSSYSLKLRATDSGQ 3401

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +     ++++ V   N   P F Q  Y  +V E A I S V  + +S
Sbjct: 3402 PALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQENAPIGSKVLQLILS 3449



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN+P    +P    IQ G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2054 VSVEDVNDNSPEFKYLPYHTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF----AEDY 2109

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q   EV V+   N  +P+FQ
Sbjct: 2110 TYFRIDPYLGDISLRKPFDYQALNKYRLKVIAQDGGTPSLQAEEEVLVIVR-NKSNPLFQ 2168

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2169 TPYYKVRVPENITLYTPI 2186



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVK 72
            P +    V+ R+++       V +++++ D N + PR   +   + +  +      ++++
Sbjct: 1514 PSQHTLTVMVRDQEMPIKRNFVWVSIHVEDRNLHRPRFTQLH-YETRVSDTTVPGAELLQ 1572

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            + A D D G NAE+ YS    ++ G   F I+   G+I    KL       Y++TV+A D
Sbjct: 1573 VRAMDGDRGANAEVRYSFLKGNSEGF--FNINTLLGIITLAQKLDQANHARYTLTVKAED 1630

Query: 131  TGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
             G      +  V +   P ++ +PVF  + Y V + E   + S +  I+ +  +
Sbjct: 1631 QGSPQRHDLATVIIHVHPSDSSAPVFSNSEYFVEIPESIPVGSPILLISATSFS 1684



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    + +++ D+NDNAPR  P    + +      
Sbjct: 3071 LDRE----KKDAYSLVAKATDGGGQSCQADVILHVEDVNDNAPRFFPSHSAVAVFDNTTV 3126

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI     L    Q    +
Sbjct: 3127 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLRVRPQAALEL 3183

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G     PVF    + V V E A   + V   AT+T
Sbjct: 3184 TVRASDLGTPIPLSTLGTVTVSVV-GLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLT 3242



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2533 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2590

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++P +GV++    L+  E
Sbjct: 2591 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSVEDLEEEVIEVNPITGVVKVKESLVGLE 2650

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     +++ + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2651 NRAFDLKIKAQDGGPPHWNSLMLLRLQVVPNEVSLPQFSEPLYTFSASEDLPEGSEIGSV 2710



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2253 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGS 2312

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2313 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2371

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2372 PPEFRQPQYEANVSELATCGHLVLKV 2397



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1462 ELLRVQATDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1519

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V VS+ V   N   P F Q  Y+  VS+
Sbjct: 1520 TVMVRDQEMPIKRNFVWVSIHVEDRNLHRPRFTQLHYETRVSD 1562



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2779 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDP 2838

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2839 GSNIHELFAIDSETGWITTLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSIT-DE 2897

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2898 NDNAPRFASEDYRGSVVENSEPGEPVATL 2926



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
           ++Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 424 QYQLHIRTSLGLAST---TVVIDIMDCNNHAPVFNRSSYDGTFDENIPP--------GTS 472

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 473 VLTVSATDQDHGENGYITYSI---ARPNAVPFSIDPYLGIISTSKPMDYELMNRIYTFRV 529

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           QA+D G    Q   EVSV   +   N   P+F++     ++ E   +  +V T++
Sbjct: 530 QASDWGSPFRQE-KEVSVSLRLKNLNDNKPMFEEVNCTGSIHEDWPVGKSVMTVS 583



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    +V+++A D D   N  + Y++  +
Sbjct: 802 LTVNVEDWNDNAPRF---PPGGYQVTISEDTEVGTTVVELKAKDVDSEDNGRVRYAL--L 856

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G I  TG L   +  QY + V+A D   K  Q
Sbjct: 857 SPT--EKFSLHPLTGEIVVTGHLDRESEPQYILKVEARDQPRKGHQ 900



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           I K+ ATD DLG NAE  Y+     NT    F I P SGV+   GKL
Sbjct: 163 ICKVSATDADLGQNAEFYYAF----NTRSEMFAIHPASGVVTLAGKL 205



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN P++  P+  P   +       +++++A 
Sbjct: 1099 YWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYPSVREDAPLHTSVLQLDAW 1158

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   ++ G   F + P +G++ T  +L     +++ + V   D G  
Sbjct: 1159 DPDSSSKGKLTFNITSGNHMGF--FVLHPLTGLLATARQLDRENKDEHILEVTVLDNGEP 1216

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            S ++   V V +   N   PVF    ++V + E
Sbjct: 1217 SLRSTSRVVVRIVDVNDNPPVFSHKLFNVRLPE 1249



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2209 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2267

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2268 FSQLVYTTSISEGLPAQTPVIQLLASDRDSG 2298



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 33/194 (17%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP-------RL 53
            +V   +LDR+  +  ++  +V AR+  ++G        L + L D+NDN+P       RL
Sbjct: 871  IVVTGHLDRE--SEPQYILKVEARDQPRKGHQLFSVTDLIITLEDVNDNSPQCITEHRRL 928

Query: 54   PM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGV 109
             +   +PP  I        +  ++A+D DLG   E+ Y +   V  T    F ++P +G 
Sbjct: 929  KVPEDLPPATI--------LTFLDASDPDLGPAGEVQYVLLDDVHGT----FHVNPMTGA 976

Query: 110  IETTGKLIAGEQ--YSITVQATDTGGK-SSQTIVEVSVV---PGPNTRSPVFQQNTYDVN 163
            +    +L    +  Y++++ A+D+G   + +T+  V V+      N   P F    +   
Sbjct: 977  LSLEKELDFERRAGYNLSLWASDSGKPLARRTLCHVEVIVLDVNENLHPPHFASFVHQGQ 1036

Query: 164  VSEGASINSTVATI 177
            V E +   ++V  +
Sbjct: 1037 VQENSPSGTSVMVV 1050



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVE 141
            +E+TY +   +  G+  F ++  SG+I T  KL   +   Y + ++ ++  G  +  +V 
Sbjct: 1684 SEVTYELREGNKNGV--FSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDIMVL 1741

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            V ++   N  +PVF + T+   +SE A +NS +     + L    +  +KE NS
Sbjct: 1742 VYII-DENDNAPVFSKLTFVGQISEAAPLNSMIMDENNNPLVIRASDSDKEANS 1794



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +  + ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 730 LAHLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATSFYVLNVT 787

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y V +SE   + +TV  +
Sbjct: 788 VYDLGTPQKSSWKLLTVNVEDW-NDNAPRFPPGGYQVTISEDTEVGTTVVEL 838



 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           VS+++ L ++NDN P   M   +       +     + ++ + A D D  +N +  +   
Sbjct: 544 VSVSLRLKNLNDNKP---MFEEVNCTGSIHEDWPVGKSVMTVSAIDVDELLNLKYEF--- 597

Query: 92  HVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVS 143
            VS   L  F ++  SGVI         TTG+ I+   YS+ + A+D    +S   + V+
Sbjct: 598 -VSGNELEYFDLNHFSGVISLKRSFRNRTTGQPIS---YSLKITASDGKNYASPMTLNVT 653

Query: 144 VVPGPNTRSPVFQQNT 159
           VV  P+   PV  + T
Sbjct: 654 VVKDPHFEVPVKCEKT 669


>gi|348565657|ref|XP_003468619.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Cavia
            porcellus]
          Length = 4527

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2523 VITTERLDRENPLEGDV--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASV 2580

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2581 RADVGRGHLVTQVQAMDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2640

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E ASI STV 
Sbjct: 2641 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDASIGSTVD 2699

Query: 176  TITV 179
            T+ +
Sbjct: 2700 TLRI 2703



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1488 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1545

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG   F+I+P  G+I  + +  + 
Sbjct: 1546 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTGT-TFKIEPVLGIITISKEPDMT 1603

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   + ++V 
Sbjct: 1604 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHQDYQAEVNENVDVGTSVI 1662

Query: 176  TIT 178
             I+
Sbjct: 1663 LIS 1665



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2044 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDRDKGANGEVTY----VLQDDY 2098

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +TV A D G  S  T VE+ +    N   PVF
Sbjct: 2099 GHFEINPNSGNVILKEAFNSDLSNIEYEVTVVAKDGGKPSLSTSVELPITI-VNKAMPVF 2157

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++ + +I
Sbjct: 2158 DKPFYTASINEDIRMDTAILSI 2179



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V + D NDN P+ P     QI+  E  R+     I +  A D D G N+EI+YSI 
Sbjct: 1209 VWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNSEISYSII 1267

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1268 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKFSTARLHIEWIKKPP 1325

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1326 PSPVPLTFDEPFYNFTVMESDRVTEIVGVVSV 1357



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 16/145 (11%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V ++D+NDN+P    +      P  I    + + I+K+ A D D+G + +I YS+Y    
Sbjct: 2988 VTVSDVNDNSPVCDQVAYTASFPEDI---PSNKIILKVGANDADIGSSGDIRYSLY---G 3041

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            +G ++F +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   
Sbjct: 3042 SGSNEFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCQSDIRL-ILEDVNDNP 3099

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF  + Y+  V E  +  + +  +
Sbjct: 3100 PVFSSDHYNACVYENTATKALLTRV 3124



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            +++ ++ LDR+  +      +   +  + + +S+  ++ + + DINDN P       L  
Sbjct: 3157 IIILEQPLDREQQSSYNISVRATDQSPERSLSSI-ATIMITVLDINDNPPVFERRDYLVT 3215

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I  +  
Sbjct: 3216 VP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVSEA 3269

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L   + +++ + V+A D G  +      VS+ +   N   P F Q+ Y   +SE A +  
Sbjct: 3270 LDYESCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNPPKFSQDVYSTVISEDALVGD 3329

Query: 173  TV 174
            +V
Sbjct: 3330 SV 3331



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1070 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTLEVYIEIEDVNDNAPLTSEPIYYPV 1127

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1128 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1185

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ V V V V   N   P F +  Y + + E
Sbjct: 1186 EQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPE 1236



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +T + K
Sbjct: 1423 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSTSMRK 1479

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1480 FRIDPTTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1539

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1540 PLYEASVFESAALGSAVLQVT 1560



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2750 FHFKV--------AATIPLDKVDIVFTVDIDIKVLDLNDNKPVFETSSYETIIMEGMPVG 2801

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ ATD D G N ++TYS++  S+    +  F ID  +G I T   L       +S
Sbjct: 2802 TKLTQVRATDMDWGANGQVTYSLHSDSHPEKVMEAFNIDSNTGWISTLKDLDHETDPAFS 2861

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2862 FSVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2918



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3070 YNLIARATDGGGRFCQSDIRLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 3129

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   +N G   F ID  SG+I     L   +Q  Y+I+V+ATD    +S
Sbjct: 3130 DVGINRKVVYSLATSAN-GF--FSIDSTSGIIILEQPLDREQQSSYNISVRATDQSPERS 3186

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +I  + + V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3187 LSSIATIMITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3229



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1809 NLDHE--TIAHFHFHVHVRDSGSPQLTADS-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1865

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++++ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1866 PTYVGVEVLRVSATDPDSEVPPELTYSLMEGS---LDNFLIDSNSGVLTIKNNNLSKDHY 1922

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             + V+ +D  GK   T +   +V         F Q+ Y  ++ E
Sbjct: 1923 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSILE 1964



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 21/163 (12%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V++ + +NDINDN       PPI  Q         A      ++++ ++D D G
Sbjct: 2236 TGARAEVTVDLLVNDINDN-------PPIFDQHTYNTTLSEASLIGTPVLQVVSSDIDSG 2288

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQT 138
             N  + Y I   +      F ID  SG+I  T +++  E     ++ V+ATD G  S   
Sbjct: 2289 NNKMVHYQIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRATDNGFPSLSN 2347

Query: 139  IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V V + +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2348 EVLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2390



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI TT + +  E    Y + +QAT+  G +S   V + VV   N  +PVF  
Sbjct: 1685 FTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATVNIQVV-DENDNAPVFLF 1742

Query: 158  NTYDVNVSEGASINSTVATITVSRL 182
            + Y  ++SE A +NS V ++  S L
Sbjct: 1743 SQYSGSLSEAAPVNSIVRSLDNSPL 1767



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V + ++++DINDN P    +I    +     R   V  ++A+D D      + YSI  +S
Sbjct: 2349 VLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSI--LS 2406

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G N  S
Sbjct: 2407 GNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-GANLYS 2464

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F Q+TY   V E A+  + V  I
Sbjct: 2465 PAFSQSTYVAEVRENAAAGTKVIHI 2489



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 17/92 (18%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINIEDANDNSPIF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
               T   +F I+   GV+   G+ +A + +S
Sbjct: 872 ----TDTQEFAINSSPGVV-YEGEGVARKNFS 898



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E      ++   + + ++D ND+ P     +      ++      I+ + A+D D
Sbjct: 441 EVYKLEVTNKEGNIKAQVIIGIDDANDHTPEFQQSLYDTFVNESVPVGTSILSVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1033 VLQVTAQDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVITAADILDRETTGS------ 1084

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1085 YWLTVYATDRGVVPLYSTLEVYIEIEDVNDNAPLTSEPIY 1124



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---------SSQTIVEVSVVPGPNTR 151
           + P SGVI  +G+L   E+  Y + + A D G K         +++  V +  V   N  
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMKLYGNNGVSSTAKLYVHIERV---NEH 262

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +PV Q  T+   V        T A +TV  L  G
Sbjct: 263 APVIQVVTH---VPFSLDKEPTYAVVTVDDLDEG 293



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ +++    N  SP+F Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINI-EDANDNSPIFLQDSYSVNILESSSIGTEIIQV 853



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPV 154
              +F ID  +GV++    L       Y +TV+A+DT  G  ++  V++ +V   N   P+
Sbjct: 2199 FQQFNIDFDTGVLKVVSPLDYEVTSIYKLTVRASDTLTGARAEVTVDL-LVNDINDNPPI 2257

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q+TY+  +SE + I + V  +  S + SG
Sbjct: 2258 FDQHTYNTTLSEASLIGTPVLQVVSSDIDSG 2288



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PR+G+I T   L  I  E Y + V   + G   +Q I+ +      N  +P FQQ+
Sbjct: 420 FKINPRTGLIVTAQPLNTIKKEVYKLEVTNKE-GNIKAQVIIGID---DANDHTPEFQQS 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + +++ +++ S    G
Sbjct: 476 LYDTFVNESVPVGTSILSVSASDKDKG 502



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ I ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2482 AGTKVIHIRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2538

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2539 -VSIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFLTVEYRASV 2580



 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I   E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L   +Q  Y++TV+
Sbjct: 926 IAWXETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELDYEKQQFYNLTVR 982

Query: 128 ATDTG 132
           A D G
Sbjct: 983 AKDKG 987


>gi|345787797|ref|XP_848507.2| PREDICTED: protocadherin Fat 3 isoform 9 [Canis lupus familiaris]
          Length = 4557

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D GVN+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAMDPDDGVNSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I ST+ 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETLLPSFTQSQYSFTVSEDTAIGSTLD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN P    +    +   +  + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 3017 VTVSDVNDNNPVCDQVAYTALFPEDIPSNKIILKVSAKDADIGSNGDIRYSLY---GSGN 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3074 AEFFLDPESGELKTLA-LLDRERVPMYSLIARATDGGGRFCQSDIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  +FRI+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--RFRINPKTGGISVSEGLDYELCKKFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            VS+ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VSINLTDVNDNPPRFSQDVYSAVISEDALVGDSV 3360



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +TV A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++ + +I
Sbjct: 2187 DKPFYTASINEDIRMDTPILSI 2208



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+ ++    
Sbjct: 1106 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPK 1163

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1164 DVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINTKTGLITTTSRKLDREQQAEHF 1221

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1222 LEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            KF   V A++    A S   ++++NL D+NDN PR        + + +A     ++ + A
Sbjct: 3306 KFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPRFSQDVYSAVISEDALVGDSVILLVA 3365

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V+    ++F ++P  G+++   KL    ++G  YS+ VQA D+
Sbjct: 3366 EDADSQPNGQIRFSI--VNGDRDNEFAVEPVLGLVKVKKKLDRERVSG--YSLLVQAVDS 3421

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G     +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3422 GIPVMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 3471



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I++IEATD D     ++TY+++  + +  + KFRIDP +GV+ T  +L   A +++ + 
Sbjct: 1478 EILQIEATDRD--EKHKLTYTVHSSIDSVSMRKFRIDPSTGVLYTAERLDHEAQDKHILN 1535

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +   D      + +  V V V   N  SP F    Y+ +V E A++ S V  +T
Sbjct: 1536 IMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVT 1589



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F +D  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLMDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +  + +D  GK   T +   +V         F Q+ Y  ++SE
Sbjct: 1952 MLIAKVSD--GKFYSTSMVTILVKEAMDSGLHFTQSFYSTSISE 1993



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPIG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKLVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI-TVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E  Q+ I  ++ATD G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHESVQHCILKIRATDNGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   P+F Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDINDNPPIFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F ++P SGVI TT K +  E+   Y + VQAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGNIDGIFTVNPYSGVI-TTRKALDYERTSSYQLIVQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV + D ND+ P    P+      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 458 VTVGIEDANDHTPEFQQPLYDVFVNESVPVGTNVLMVSASDKDKGENGYITYSI---ASL 514

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            L  F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 515 NLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 574

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 575 SPLFEK 580



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLIARATDGGGRFCQSDIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   +N G           ++E          Y+I+VQATD   G++  
Sbjct: 3159 DVGINRKVVYSLADSAN-GFFSIDSSSGIIILEQPLDREQQPSYNISVQATDQSPGQALS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTAQDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADTGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLLPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGDPQKSSWRLLTINV-EDANDNSPVFLQDSYSVNILESSSIGTEIIQV 853



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++DINDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDINDNPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SG+I  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  I  E Y + V   +   K+  T+     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTIKKEVYKLGVTNKEGDLKAQVTVG----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YDV V+E   + + V  ++ S    G
Sbjct: 476 LYDVFVNESVPVGTNVLMVSASDKDKG 502



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGAYGQISYAI--INDFAKDRFLIDNNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|324502680|gb|ADY41177.1| Cadherin-related tumor suppressor, partial [Ascaris suum]
          Length = 1121

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTA--ASVPVSLTVNLNDINDNAPRLPM-IP 57
           Y+ ++  ++D DPPNP  +   + ARE   T   +S P+ +T+++ DINDN P     I 
Sbjct: 76  YVYLNAPSVDADPPNPSSYELIIEAREVNTTPIRSSEPIKITIHIIDINDNVPTFSSSIY 135

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              + A    R +++I A DND G  A I Y I  V+N     F  D  S  +   G+L+
Sbjct: 136 MANVSANGRNRPVIEIFAVDNDAGKFAHIEYKIVSVTNGAFGNFYYDSDSKQLMAIGQLV 195

Query: 118 AGEQYSITVQATDTGGKSSQTIVEV 142
             E+Y + ++A D GG  SQ  V V
Sbjct: 196 PSEKYEVVLEARDGGGLWSQAKVIV 220



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 21/104 (20%)

Query: 45   DINDNAPRL----PMIPPIQIQA----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            D NDN P+      +  PI   A      A   +VK++A D D+G N+EI YS+    + 
Sbjct: 917  DENDNIPQFVFDNELSLPIYFAAIALNAPAFTHVVKVKAEDADIGNNSEIVYSL----DE 972

Query: 97   GLHK---FRIDPRSGVIETTGKLIAGEQ------YSITVQATDT 131
            GL     F ID RSG IET   +   +       + I V+A D+
Sbjct: 973  GLSDSKFFSIDQRSGEIETKMSMAQLQNINRKAYFDIKVRACDS 1016


>gi|332634638|ref|NP_001193811.1| protocadherin Fat 3 precursor [Bos taurus]
 gi|296471991|tpg|DAA14106.1| TPA: protocadherin Fat 3-like [Bos taurus]
          Length = 4555

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V + E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2551 VTTTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G NA ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQAMDPDDGANARITYSLYSEASVSVADLLEIDPDNGWMVTKGHFNQL 2668

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 2669 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETSVPSFTQSQYSFTVSEDTAIGSTVD 2727

Query: 176  TITV 179
            T+ +
Sbjct: 2728 TLRI 2731



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 8/141 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y     G 
Sbjct: 3016 VTVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGPNGDIRYSLY---GPGN 3072

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            ++F +DP SG ++T   L       YS+  +ATD GG+  Q+ + ++ +   N   PVF 
Sbjct: 3073 NEFFLDPESGELKTLAPLDRERVPAYSLVARATDGGGRFCQSDLRLT-LEDVNDNPPVFS 3131

Query: 157  QNTYDVNVSEGASINSTVATI 177
             + Y+  V E  +  + +  +
Sbjct: 3132 SDHYNACVYENTATKALLTRV 3152



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 VLYTAERLDHEAQD--KHILHIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1574 VFESAALGSAVLQVTALDKDKGENAELMYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+ +P F    Y   V+E   + ++V 
Sbjct: 1632 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNS-NPRFTHKDYQAEVNENVDVGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            +VV +  LDR+  +    R Q    +  G A S   ++++ + D+NDN P       L  
Sbjct: 3185 IVVLERPLDREQQSSYTLRVQA-TDQSPGRALSSLATISITVLDVNDNPPVFERRDYLVS 3243

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I  +  
Sbjct: 3244 VP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVSEA 3297

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L      ++ + V+A D G  +   +  V + +   N   P F Q+ Y   +SE A +  
Sbjct: 3298 LDYELCRKFYLVVEAKDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISEDALVGD 3357

Query: 173  TV 174
            +V
Sbjct: 3358 SV 3359



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  +F IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1296 DGNDDG--RFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1354 PSPVPLTFDEPFYNFTVMENDRVTEIVGVVSV 1385



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            ++ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2072 SIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2127 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILARDGGKPSLSTSVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E  ++++ + +I
Sbjct: 2186 DKPFYTASVNEDIAMDTPILSI 2207



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 816 LTINVEDANDNSPIF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 870

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 871 ----TDTQQFAINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 926

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++AR   G        L + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YSLVARATDGGGRFCQSDLRLTLEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+GVN ++ YS+   +N G   F +D  SG++     L   +Q  Y++ VQATD   G++
Sbjct: 3158 DVGVNRKVVYSLADSAN-GF--FSVDSSSGIVVLERPLDREQQSSYTLRVQATDQSPGRA 3214

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  +S+ V   N   PVF++  Y V+V E  S  + V  +
Sbjct: 3215 LSSLATISITVLDVNDNPPVFERRDYLVSVPEDTSPGTQVLAV 3257



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 17   GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
              F F V  R+    Q TA S PV + + + D+NDN P     +   I +       +++
Sbjct: 1844 AHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLLPTYVGVEVL 1902

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            K+ A D D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y + V+ +D 
Sbjct: 1903 KVSAVDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTVKNNNLSKDHYMLIVKVSD- 1958

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             GK   T +   +V         F QN Y  ++SE
Sbjct: 1959 -GKFYSTSMVTILVKEAMDSGLHFTQNFYSTSISE 1992



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+ ++    
Sbjct: 1105 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPK 1162

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   + ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1163 DVSVIQIQAEDPDSSSSEKLTYRI--TSGNPQNFFAINVKTGLITTTSRKLDREQQAEHF 1220

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1221 LEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1264



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1451 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHGSIDSISMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1508 FRIDPSTGVLYTAERLDHEAQDKHILHIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSAVLQVT 1588



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D G N  + Y
Sbjct: 2264 TGARAEVTIDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKMVHY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD G    SS+ +V + 
Sbjct: 2324 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHESVQHCTLKVRATDNGFPSLSSEVLVHI- 2381

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 11/170 (6%)

Query: 19   FRFQVIAREKQGTAASV-PVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
            F F+V A        +V  V + V + D+NDN P         I ++      ++ ++ A
Sbjct: 2778 FHFKVAATMPLDKVDAVFTVDVDVKVLDLNDNKPVFETSNYETIIMEGMPVGTKLTQVRA 2837

Query: 76   TDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             D D G N ++TYS++  S     +  F ID  +G I T   L       ++ +V A+D 
Sbjct: 2838 MDVDWGANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDHETDPMFTFSVVASDL 2897

Query: 132  G---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2898 GEAFSLSSTALVSVRVT-DINDNTPVFAHKVYRGNVKESDPPGEVVAVLS 2946



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F I+P SGVI TT K +  E+   Y + VQAT+  G +S   V + +V
Sbjct: 1701 IYEVKDGNVDGIFTINPYSGVI-TTRKALDYERTSSYQLIVQATNMAGMASNVTVNIQIV 1759

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1760 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1795



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 884  IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 941

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 942  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSRELD 998

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 999  YEKQQFYNLTVRAKDKG 1015



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +++ + D+ND  P   P    + I    A R  + ++ ATD D+G N E     Y+    
Sbjct: 143 VSIQVLDMNDLRPLFSPTTYSVTIAENTALRTSVAQVTATDADIGSNGE----FYYYFKN 198

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            +  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 199 KVELFSVHPTSGVISLSGRLNYDEKSRYDLEILAVDRGMK 238



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1112

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1113 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1152



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 9/113 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITV 126
           I+KI+A D D G N ++ ++I   S+  +   F ID  +G ++    +    +  Y + +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTI---SDGNMDSCFNIDMETGQLQVLMPMDREHRDLYLLNI 800

Query: 127 QATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              D G   KSS  ++ ++V    N  SP+F Q++Y VN+ E +SI + +  +
Sbjct: 801 TIYDLGNPQKSSWRLLTINV-EDANDNSPIFLQDSYSVNILESSSIGTEIIQV 852



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2361 LKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SG+I  +   K      YS+ V  +D G  +S
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 2514



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+++ D ND+ P     +      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 457 VTISIEDANDHTPEFQQLLYEAFVNESVPVGTSVLTVSASDKDKGENGYITYSI---ASL 513

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSV-VPGPNTR 151
            +  F I+  +GVI TT  L    + E Y   V+A+D G     ++ V V++ V   N  
Sbjct: 514 NVLPFAINQFTGVISTTEDLDFESSPETYRFIVRASDWGSPYRHESEVNVTIRVGNVNDN 573

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 574 SPLFEK 579



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G+  +I+Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 2510 AGTKVIHVRATDGDPGMYGQISYAI--INDFAKDRFLID-GNGQVTTTERLDRENPLEGD 2566

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2567 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFLTVEYRASV 2608


>gi|348557432|ref|XP_003464523.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cavia
            porcellus]
          Length = 4356

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+     K+  ++ A + +    SVPV + V   D+NDN+P+ P +    
Sbjct: 2966 WRISSRKTLDRE--YMAKYLLRITASDGK-FQTSVPVEIFVL--DVNDNSPQCPQL---- 3016

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G  R        I+K+ ATD D   NA+ITYS++     G H+F++ P +G + T  
Sbjct: 3017 LYTGRVREDVSPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKMGPHTGELTTLT 3073

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L     + YS+  +ATD GG+S Q  V +  V   N  +P F  +   V + +  ++ +
Sbjct: 3074 ALDRERKDMYSLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCAVAIFDNTTVKT 3132

Query: 173  TVATI 177
             VA +
Sbjct: 3133 PVAVV 3137



 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 21/154 (13%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + DINDNAP         RLP  P     +  +   + ++ A+D D G+N  +TYS
Sbjct: 1228 VVVCILDINDNAPTFSHKLFNVRLPERP-----SPASPGAVYRLVASDPDDGLNGSVTYS 1282

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
            I      G   F IDP +GV+ ++    AGE   +T++ATD+G    SS   + +  +P 
Sbjct: 1283 IEESDEEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQPPLSSSVRLHIEWIPQ 1339

Query: 148  PNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1340 PRPSSIPLAFDEPHYSFTVMETDPVNHMVGVISV 1373



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P   I Q G E    + ++ ATD DLG +  +TY+         
Sbjct: 2058 VSVEDVNDNPPEFKHLPYYTIVQDGTEPGDVLFQVSATDRDLGASGTVTYAF----TEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYVGDISLKKPFDYQALNKYRLKVVALDGGTPSLQTEAEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYRVRVPENITLYTPI 2190



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 15/176 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + I      
Sbjct: 3075 LDRE----RKDMYSLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCAVAIFDNTTV 3130

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  +  + A D D G NA++ YS+   +++   +F ID  +GVI     L A  Q    +
Sbjct: 3131 KTPVAVVFARDPDQGTNAQVVYSL---TDSAEGQFSIDAATGVIRLEKPLQARPQGVLEL 3187

Query: 125  TVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            TV A+D G     S+   V VSVV G     PVF    + + V E A   + V ++
Sbjct: 3188 TVCASDLGVPMPLSTMGTVSVSVV-GLEDYLPVFLNTEHSLQVREDAPPGAQVLSL 3242



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +TV++ D N + PR   +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEMPIKRNFVWVTVHVKDGNIHPPRFTQLHYEARVPDTIAPGA---EL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            ++++A D D G NAE+ YS+   ++     F ID   G+I    KL       +++ V+A
Sbjct: 1575 LQVQAVDADRGANAEVHYSLLKGNSEDF--FSIDVLQGIITVARKLNQANHIRHTLMVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
             D G      +  V V   P+  S P+F    Y V V E   + S +  ++ +
Sbjct: 1633 EDHGSPRKHDLATVVVHVYPSASSAPIFSNTEYFVEVPESIPVGSPILLVSAT 1685



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEA 75
            K+   +    K   + S   ++ VN+ D+N++ PR P  +   ++     R  I+  + A
Sbjct: 3288 KYFLSIECIRKASASLSDVTTIVVNVTDVNEHHPRFPKDLYSARVLENAIRGDIILTVSA 3347

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3348 TDEDGPLNSAITYSL--VGGNQLGHFTIHPKKGELQ-VAKALDWEQTSSYSLKLRATDSG 3404

Query: 133  GKSSQTIVEVSVVPGPNTRSP--VFQQNTYDVNVSEGASINSTVATITVS 180
                 + V++ V       +P   FQ N Y   V E + + S V  + +S
Sbjct: 3405 QPPLHSDVDIDVQVVDVNDNPPRFFQLN-YSTAVQENSPVGSQVLQLILS 3453



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVFVEDVNDNPPTFSQLVYTTAVSEGLPAQTSVIQLLASDQDSGHNRDVSYEIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A   + + V+ATD G    + +T+V V+ V   N  
Sbjct: 2317 DASKFFQINGSTGEMVTLQELDYEAQRHFHVKVRATDRGNPPLTGETLVIVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 2783 VSVHIQVKDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGNDGQVSYRLSAEP 2842

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  SG I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2843 GSSVHELFAIDSESGWITTLKELDCETHQTYRFHVVAFDHGQTIQLSSQALVEVSIT-DE 2901

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     V T+
Sbjct: 2902 NDNAPRFTSEDYRGSVVENSEPGELVTTL 2930



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
           R+Q+  R   G A++V   + V++ D N++AP              IPP           
Sbjct: 428 RYQLYVRTSPGLASAV---VIVDIVDCNNHAPIFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI          F IDP SGVI T+  +   +    Y   V
Sbjct: 477 VLTVTATDQDPGENGYITYSIIAPKAV---PFSIDPFSGVISTSKPMDYELMRRIYMFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++    V++ +   +  +V T +
Sbjct: 534 RASDWGTPFRQE-KEVSVSLRLKNLNDNRPMFEEVNCTVSIRQDWPVGRSVMTFS 587



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 32   AASVPVS----LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
              SVP+S    + + + D+NDN PR+  P+  P  ++       +++++A D D     +
Sbjct: 1112 GGSVPLSSVTEVYIEITDVNDNPPRMSRPVFYPCIVENAPLGTSVLQLDARDPDPSSRGK 1171

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
            +T++I   ++ G+  F + P +G++ T  +L   + +++ + V   D G  S ++   V 
Sbjct: 1172 LTFNITAGNHVGV--FTLHPLTGLLSTARQLDRESKDEHILEVTVLDNGEPSLRSTSRVV 1229

Query: 144  V-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            V +   N  +P F    ++V + E  S
Sbjct: 1230 VCILDINDNAPTFSHKLFNVRLPERPS 1256



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQ 127
           I K+ ATD DLG NAE  Y+     NT    F I P SGV+   GKL      +Y + V 
Sbjct: 167 ICKVTATDADLGQNAEFYYAF----NTRSDIFAIHPTSGVVTVAGKLNVTWRGKYELQVL 222

Query: 128 ATDTGGKSSQ-------TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D   K S+         + + V P P     +       V    G+S ++T AT+ V 
Sbjct: 223 AVDRMRKISEGNGFGNLAALTIHVEPAPKKPPAIVSV----VVTPAGSSEDATYATVVVD 278

Query: 181 RLASGCAIMNKE 192
              SG  + + E
Sbjct: 279 ANGSGSEVDSLE 290



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++++ A D+D G + EI Y +   + TGL  F IDP +G+I+T   L   +   Y +TV
Sbjct: 1050 QVMQVMAQDDDNGSDGEIQYFLR--AGTGLAAFSIDPDTGMIQTRAPLDRESVPYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV 144
             A D G     ++ EV +
Sbjct: 1108 LAVDGGSVPLSSVTEVYI 1125



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 15/184 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
            + + + LDR+         +V+AR+  G  A   V +   L D NDNAP     R  +  
Sbjct: 2537 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCIVKII--LTDENDNAPQFKASRYTLSV 2594

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  +        ++++ A D D G NA++TYS+  V +       ++  +GV++    L+
Sbjct: 2595 PSNVSKD---FPVIQVLAYDADEGRNADVTYSVDPVEDLADDLIDVNEITGVVKVKESLV 2651

Query: 118  AGEQYSI--TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
              E  ++   V+A D G     SQ  V++ VV       P F +  Y    SE   + S 
Sbjct: 2652 GLENKTLRFKVKAQDGGPPHWDSQVPVQLQVVSN-EVSLPKFSEPLYTFPASEDLPVGSE 2710

Query: 174  VATI 177
            V  +
Sbjct: 2711 VGVV 2714



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I    + G    F++DP +GV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQATDEDKGKG--LIYTIQGSQDLGSASLFQLDPSTGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V+V V   N   P F Q  Y+  V +
Sbjct: 1524 TVMVRDQEMPIKRNFVWVTVHVKDGNIHPPRFTQLHYEARVPD 1566



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           L VN+ D NDNAPR    PP   Q       E    I +++  D D   N  + Y++  +
Sbjct: 806 LAVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELKTEDEDSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   A  QY + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDREAEPQYVLKVEARDQPKKGHQ 904



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 18/176 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            LVV+  +LDR+   P ++  +V AR+  K+G        L + L D NDN PR +  +  
Sbjct: 875  LVVTG-HLDREA-EP-QYVLKVEARDQPKKGHQLFSVTDLIITLADANDNPPRCITELSS 931

Query: 59   IQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL 116
            +++        IV  ++A+D DLG   E+ Y    V +  +H  FR+DP +G +    +L
Sbjct: 932  LKVPEDLPLGTIVTFLDASDPDLGPAGEVQY----VLSDDIHGTFRVDPMTGALSLEKEL 987

Query: 117  IAGEQ--YSITVQATDTGGK-SSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSE 166
                +  Y++++  +D+G   + +T+  V V+      N   P F    Y   V E
Sbjct: 988  DFERRAGYNLSLWVSDSGKPLARRTLCHVEVIVLDVNENLHPPRFASFVYQGQVQE 1043



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEV 142
            + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV
Sbjct: 2203 LIYNI--VEEESLPLFTTDFKTGVLTVTGPLDYESKTRHIFTVRATDTALGSFSEATVEV 2260

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V   N   P F Q  Y   VSEG    ++V  +  S   SG
Sbjct: 2261 -FVEDVNDNPPTFSQLVYTTAVSEGLPAQTSVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 8/155 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             F  +V A ++     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2344 HFHVKVRATDRGNPPLTGETLVIVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA 2403

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGG 133
             D D    + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 2404 LDPDSRDTSRLEYLI--LSGNQDRHFSINKSSGIISMLNLCKKQLDSSYNLRVGASD--G 2459

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                T+         N  SP FQQ+ Y+  ++E A
Sbjct: 2460 VFQATVPVYINTTNANKYSPEFQQHIYEAELAENA 2494



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 24/158 (15%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARR 68
            F+F V   + QG+    A  P  + + + D+ND+ PR         ++ PI         
Sbjct: 1836 FQFNVYVHD-QGSPILFAPRPAKVIIYVRDVNDSPPRFAEQIYEAAVVGPIHFGM----- 1889

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            +++ + A+D D    +E+TYSI    NT      IDP +G I        G    +T++A
Sbjct: 1890 ELLTVRASDED----SEVTYSI-KTGNTD-DAVAIDPVTGCISVLNPAALGASRKLTIRA 1943

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G      +V++S+    + +S  F Q  Y   V E
Sbjct: 1944 SD-GLYQDTALVKISLTQVLD-KSLQFDQEVYRTKVKE 1979



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 11/125 (8%)

Query: 37  VSLTVNLNDINDNAPRLPMI-PPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           VS+++ L ++NDN P    +   + I Q     R ++   A D D   N  + Y I  VS
Sbjct: 548 VSVSLRLKNLNDNRPMFEEVNCTVSIRQDWPVGRSVMTFSAIDVDELQN--LKYEI--VS 603

Query: 95  NTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKSSQTIVEVSVVPGPN 149
              L  F ++  SGVI      I   AG+   YS+ + A+D    +S T + V+VV  P 
Sbjct: 604 GNELGYFDLNHFSGVIALKRSFINLSAGQPTSYSLKITASDGQNYASPTTLNVTVVKDPL 663

Query: 150 TRSPV 154
             SPV
Sbjct: 664 FASPV 668



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 10/146 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +++    IN +AP+     P  I   E       + ++ A D D G N ++ Y I   + 
Sbjct: 700 MSLTTYQINHHAPQFADHFPQSIDILECVPVNTSLARLAAADPDAGFNGQLVYVITDGNE 759

Query: 96  TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            G     +D  +G++     L     +    +ITV    T  KSS  ++ V+V    N  
Sbjct: 760 DGCFDIELD--TGLLMVAAPLDYETTSFYLLNITVYDLGTPQKSSWKLLAVNVKDW-NDN 816

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +P F    Y + +SE   + +T+A +
Sbjct: 817 APRFPPGGYQLTISEDTEVGTTIAEL 842


>gi|326673644|ref|XP_002664482.2| PREDICTED: protocadherin-11 X-linked [Danio rerio]
          Length = 1098

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 89/189 (47%), Gaps = 16/189 (8%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
           ++  +++A +      +    + + + D NDN P  P  P IQ+   E      Q++KI 
Sbjct: 431 EYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQ-PEIQLSIPENNDPGTQLIKIS 489

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
           ATD D G NA I YS+   +  G   F ID RSG++    +L     E+YS TV A D G
Sbjct: 490 ATDADSGSNALIIYSLGPDAPDG---FNIDSRSGILSVVKRLDREKQEKYSFTVIARDNG 546

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------ 185
               Q+ V V  +V   N  SP F    Y+  V E   +  TV  ITV+   +G      
Sbjct: 547 TTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVT 606

Query: 186 CAIMNKEEN 194
            +I+N ++N
Sbjct: 607 LSIINGKDN 615



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 20/180 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+     K+ F VIAR+   T     V++ + + D NDN+P     P       E   
Sbjct: 528 LDRE--KQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTH-PEYNFYVPENLP 584

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               +  I  TD D G NA +T SI +    G   F IDP++GVI+        +Q  Y+
Sbjct: 585 LYGTVGLITVTDADAGDNAVVTLSIIN----GKDNFIIDPKTGVIKPNITFDREQQSSYT 640

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF----QQNTYDV---NVSEGASINSTVA 175
             V+A D G   + +  +V++ V   N   PVF       +YD+   N S G+ +    A
Sbjct: 641 FVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFA 700



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      +    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P     G     + ++ A DND G+NAE+ YSI   S  GL  F ID  +G I    
Sbjct: 683 DLVPSNTSPGSV---VTRVFAIDNDTGMNAELQYSIIGGSLRGL--FTIDKTTGNITLQE 737

Query: 115 KLIAGEQ--YSITVQATDTGGKSS 136
           K++A +Q  + + V+  D G   S
Sbjct: 738 KIVAADQGLHRLVVKVKDLGQPES 761



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 16/190 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           ++ +++LDR+  +   F  ++   +      S    L V ++D+NDN P       +++ 
Sbjct: 201 LIVQQSLDRETKD--TFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVF-KDSEVEVN 257

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI- 117
             E       +  + ATD DLG NA+I +S    +S +    F ID  +G+I     L  
Sbjct: 258 VPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPSTKRHFAIDSTTGLITVKQPLDR 317

Query: 118 -AGEQYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASI 170
                + + V A+D     S+  V V+V      VP  +TR  +       V +SE A +
Sbjct: 318 EVNPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRY-IMNLVNGTVLLSENAPL 376

Query: 171 NSTVATITVS 180
           N+ +A ITV+
Sbjct: 377 NTKIALITVT 386



 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 25/199 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+  K+ LDR+  NP     ++I     G++     ++ VN+ DINDN P +     + +
Sbjct: 308 LITVKQPLDREV-NPVH---KLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYIMNL 363

Query: 62  QAGEA--------RRQIVKIEATDNDLGVNAEIT-YSIYHVSNTGLHKFRIDP---RSGV 109
             G            +I  I  TD D  +N ++T Y+ + V       FR+ P      +
Sbjct: 364 VNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVP------FRLKPVFNDQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           +ET   L      +Y+I + A+D+G     T   V + +   N   PVF Q    +++ E
Sbjct: 418 LETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPE 477

Query: 167 GASINSTVATITVSRLASG 185
                + +  I+ +   SG
Sbjct: 478 NNDPGTQLIKISATDADSG 496


>gi|449266545|gb|EMC77591.1| Neural-cadherin, partial [Columba livia]
          Length = 2420

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 23  VIAREKQGTAASVPVS----LTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEAT 76
            + R +    A+VP++    + +NL D+NDN P     I    +  G A    +V++ AT
Sbjct: 713 FLLRVRAQNVAAVPLAAFTTIYINLTDVNDNVPFFTSSIYEASVTEGAAVGTFVVQVSAT 772

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---- 130
           D DLG N EITYS+ H S      FR+D ++G + T       ++  Y + V++ D    
Sbjct: 773 DLDLGQNGEITYSLLHDSGRDYTYFRLDSQTGSVYTASVFDREKKGSYLLEVKSVDGSES 832

Query: 131 -----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                 G  +S T      +   N   PVF Q+ Y+VNV E   + S + T+T
Sbjct: 833 ARPGKHGKPNSDTAYVRVFISDVNDNKPVFTQSVYEVNVDEDQDVGSAIITVT 885



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 15/190 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--- 59
            + S + LDR+      +RF V+A ++ G   +    + +N+ DINDNAP    +P     
Sbjct: 1023 IYSHKMLDRE--ERALWRFVVLATDEGGEGLTGFADVIINVWDINDNAPMFTCMPDDCNG 1080

Query: 60   ----QIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNT-GLHKFRIDPRSGVIETT 113
                   AG    ++  ++  D ++G+NA +TY I  +V N  G   F I+P +G I   
Sbjct: 1081 SVFENSPAGTLVMEMGAVDRDDPNVGLNAVLTYRITENVKNEFGTDMFHINPNTGTIHVA 1140

Query: 114  GKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G ++  E+   Y +TV+A D GG +      + V    N   P F +  +   + E +++
Sbjct: 1141 GGMLDRERTDSYFLTVEARDGGGLTGTGTATIWVA-DVNDHVPQFTKKMWQATIPENSAV 1199

Query: 171  NSTVATITVS 180
            +S V  +  +
Sbjct: 1200 DSEVLQVCAT 1209



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 11/145 (7%)

Query: 39  LTVNLNDINDNAPRLPM--IPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVS 94
           L++ + D+ND+ P   M   P + + + EA    ++ K+ A D D G+   + Y +    
Sbjct: 1   LSLTVTDVNDSVPEWAMEPFPFLAVVSPEAAGGTEVYKLLAVDADEGIGGAVEYFLL--- 57

Query: 95  NTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
           + G  +F ++  +G+I+TTG  L+  ++Y +TV A D  G S      VSV+ G   R P
Sbjct: 58  DGGEDRFEVEKDTGLIKTTGLPLVRDKEYLLTVLAADKLG-SRGPPASVSVIAG--FRPP 114

Query: 154 VFQQNTYDVNVSEGASINSTVATIT 178
            F   +Y   V E      +  T+T
Sbjct: 115 QFTNISYFAYVPESMPQGKSFLTVT 139



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 45  DINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D NDN PR            + R     +++ A D+D   NA ITYSI   +N   +  +
Sbjct: 527 DQNDNDPRFENTHYEYFLREDTRVGTSFLRVAAHDDDYSSNAAITYSI---ANEEPNYLQ 583

Query: 103 IDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
           I+P +G +     +         + ATD G +SS+  + V++    N + P +++++Y+V
Sbjct: 584 INPTTGWVFVNQPISQRSSIIREIIATDGGNRSSKVELVVTITSAKN-QPPQWERDSYEV 642

Query: 163 NVSEGASINSTVATI 177
            + E  + +++V TI
Sbjct: 643 VIPENTTRDASVLTI 657



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 14/116 (12%)

Query: 32  AASVPVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDL 80
           A+  P SLT      V ++D+N+N P        +  A     Q     ++++EATD D 
Sbjct: 399 ASGGPHSLTSTAQVVVKIDDVNNNKPVFQKCQDYREHASVLENQPSGTVVLQVEATDADE 458

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N  + Y + H     L  F I P +GV+ T       +Q  Y ITV ATD   +
Sbjct: 459 GANGIVKYGLMHRGGV-LPAFSIHPDTGVLTTVQVFDREKQREYPITVTATDQAAE 513



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 13/166 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIE 74
           ++   V A E +G  +S    L V + D+ND AP        ++   E       ++++ 
Sbjct: 183 QYLLLVRAEENEGHFSSAAEVLVV-ITDVNDCAPEFHRSIYSKVDVPETVTMTTALLQVT 241

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG 132
           ATD D   NAEI Y  Y +S      F I     +   T          Y   + A D G
Sbjct: 242 ATDCDSKENAEILY--YTLS----QDFSITSHGTIFPATQLDYERPNHLYEFVIMAVDKG 295

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +       V + V   N  +P F Q  Y   VSE A  N+ VAT+
Sbjct: 296 EEPKTGTATVRIHVSNVNDEAPEFSQKIYRSFVSEDAGPNTLVATV 341



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
           K G   S    + V ++D+NDN P     +  + + +  +    I+ + A D D G NA+
Sbjct: 837 KHGKPNSDTAYVRVFISDVNDNKPVFTQSVYEVNVDEDQDVGSAIITVTANDEDEGTNAK 896

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS 143
           + Y I    NTG     ++P +G I     L   E   Y I + A+D  GK     V + 
Sbjct: 897 LRYQI-TAGNTG-GVLDVEPETGAIFIAQPLDYEETKMYEIHLLASD--GKWEDYAVIII 952

Query: 144 VVPGPNTRSPVFQQNTY 160
            V   N  +PVF  N Y
Sbjct: 953 NVINKNDETPVFSINEY 969



 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 34/168 (20%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LD + PN   + F ++A +K     +   ++ ++++++ND AP           + +  R
Sbjct: 276 LDYERPN-HLYEFVIMAVDKGEEPKTGTATVRIHVSNVNDEAPEF---------SQKIYR 325

Query: 69  QIVKIEATDNDL--GVNA------EITYSIYHVSNTGLHKFRIDPRSGVIETTGK---LI 117
             V  +A  N L   VNA       +TY I   +  G   F IDP  G++         +
Sbjct: 326 SFVSEDAGPNTLVATVNAVDPDGDGVTYDILSGNQKG--NFVIDPNKGLVRLRSSPFPKL 383

Query: 118 AGEQYSITVQATD---TGGKSS-----QTIVEVSVVPGPNTRSPVFQQ 157
            G +Y + V ATD   +GG  S     Q +V++  V   N   PVFQ+
Sbjct: 384 QGTEYVLNVTATDDNASGGPHSLTSTAQVVVKIDDV---NNNKPVFQK 428


>gi|440909070|gb|ELR59020.1| Protocadherin Fat 3, partial [Bos grunniens mutus]
          Length = 3373

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V + E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1330 VTTTERLDRE--NPLEGDISIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASV 1387

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G NA ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1388 RADVGRGHLVTQVQAMDPDDGANARITYSLYSEASVSVADLLEIDPDNGWMVTKGHFNQL 1447

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 1448 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETSVPSFTQSQYSFTVSEDTAIGSTVD 1506

Query: 176  TITV 179
            T+ +
Sbjct: 1507 TLRI 1510



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 8/141 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y     G 
Sbjct: 1795 VTVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGPNGDIRYSLY---GPGN 1851

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            ++F +DP SG ++T   L       YS+  +ATD GG+  Q+ V ++ +   N   PVF 
Sbjct: 1852 NEFFLDPESGELKTLAPLDRERVPAYSLIARATDGGGRFCQSDVRLT-LEDVNDNPPVFS 1910

Query: 157  QNTYDVNVSEGASINSTVATI 177
             + Y+  V E  +  + +  +
Sbjct: 1911 SDHYNACVYENTATKALLTRV 1931



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 295 VLYTAERLDHEAQD--KHILHIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 352

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
             ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 353 VFESAALGSAVLQVTALDKDKGENAELMYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 410

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q+ ++V+ TD G    S+  IV +SV    N+ +P F    Y   V+E   + ++V 
Sbjct: 411 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNS-NPRFTHKDYQAEVNENVDVGTSVI 469

Query: 176 TIT 178
            I+
Sbjct: 470 LIS 472



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 16  IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 74

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
             ++ G  +F IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 75  DGNDDG--RFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 132

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F +  Y+  V E   +   V  ++V
Sbjct: 133 PSPVPLTFDEPFYNFTVMENDRVTEIVGVVSV 164



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            ++V +  LDR+  +    R Q    +  G A S   ++++ + D+NDN P       L  
Sbjct: 1964 IIVLERPLDREQQSSYTLRVQA-TDQSPGQALSSLATISITVLDVNDNPPVFERRDYLVS 2022

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   S     KFRI+P++G I  +  
Sbjct: 2023 VP----EDTSPGTQVLAVFATSKDIGTNAEITYLIR--SGNEQRKFRINPKTGGISVSEA 2076

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L      ++ + V+A D G  +   +  V + +   N   P F Q+ Y   +SE A +  
Sbjct: 2077 LDYELCRKFYLVVEAKDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISEDALVGD 2136

Query: 173  TV 174
            +V
Sbjct: 2137 SV 2138



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 12/139 (8%)

Query: 45  DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V       F
Sbjct: 854 DINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDYGHF 908

Query: 102 RIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF + 
Sbjct: 909 EINPNSGNVILKEAFNSDLSNIEYGVTILARDGGKPSLSTSVELPITI-VNKAMPVFDKP 967

Query: 159 TYDVNVSEGASINSTVATI 177
            Y  +V+E  ++++ + +I
Sbjct: 968 FYTASVNEDIAMDTPILSI 986



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 1877 YSLIARATDGGGRFCQSDVRLTLEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 1936

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+GVN ++ YS+   +N G   F +D  SG+I     L   +Q  Y++ VQATD   G++
Sbjct: 1937 DVGVNRKVVYSLADSAN-GF--FSVDSSSGIIVLERPLDREQQSSYTLRVQATDQSPGQA 1993

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  +S+ V   N   PVF++  Y V+V E  S  + V  +
Sbjct: 1994 LSSLATISITVLDVNDNPPVFERRDYLVSVPEDTSPGTQVLAV 2036



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 17  GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
             F F V  R+    Q TA S PV + + + D+NDN P     +   I +       +++
Sbjct: 623 AHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLLPTYVGVEVL 681

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
           K+ A D D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y + V+ +D 
Sbjct: 682 KVSAMDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTVKNNNLSKDHYMLIVKVSD- 737

Query: 132 GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            GK   T +   +V         F QN Y  ++SE
Sbjct: 738 -GKFYSTSMVTILVKEAMDSGLHFTQNFYSTSISE 771



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 230 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 286

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 287 FRIDPSTGVLYTAERLDHEAQDKHILHIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 346

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S V  +T
Sbjct: 347 PLYEASVFESAALGSAVLQVT 367



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D G N  + Y
Sbjct: 1043 TGARAEVTIDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKMVHY 1102

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD G    SS+ +V + 
Sbjct: 1103 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHESVQHCTLKVRATDNGFPSLSSEVLVHI- 1160

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1161 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1197



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90  IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           IY V +  +   F I+P SGVI TT K +  E+   Y + VQAT+  G +S   V + +V
Sbjct: 480 IYEVKDGNVDGIFTINPYSGVI-TTRKALDYERTSSYQLIVQATNMAGMASNVTVNIQIV 538

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 539 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 574



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 45   DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHK 100
            D+NDN P         I ++      ++ ++ A D D G N ++TYS++  S     +  
Sbjct: 1584 DLNDNKPVFETSNYETIIMEGMPVGTKLTQVRAMDVDWGANGQVTYSLHSDSQPEKVMEA 1643

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVF 155
            F ID  +G I T   L       ++ +V A+D G     SS  +V V V    N  +PVF
Sbjct: 1644 FSIDSNTGWISTLKDLDHETDPMFTFSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVF 1702

Query: 156  QQNTYDVNVSEGASINSTVATIT 178
                Y  NV E       VA ++
Sbjct: 1703 AHEVYRGNVKESDPPGEVVAVLS 1725



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 1140 LKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 1199

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SG+I  +   K      YS+ V  +D G  +S
Sbjct: 1200 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTS 1256

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 1257 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 1293



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G+  +I+Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 1289 AGTKVIHVRATDGDPGMYGQISYAI--INDFAKDRFLID-GNGQVTTTERLDRENPLEGD 1345

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1346 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFLTVEYRASV 1387


>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
            sapiens]
          Length = 2228

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 938  IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 995

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 996  GSSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 1055

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 1056 NEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 1115



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 1605 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 1659

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 1660 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 1719

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 1720 DNTPVFSQDTYTTVISEDAVLEQSVITV 1747



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 1366 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 1420

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 1421 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 1474

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 1475 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFE 1526



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 1483 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 1542

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 1543 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 1599

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 1600 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 1642



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 1681 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 1738

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 1739 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDRETISG 1795

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 1796 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 1855



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 1164 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 1223

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 1224 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 1283

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 1284 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 1319



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
           T A   V + + ++DINDN P         +   EA      +V++ ATD+D   N  I+
Sbjct: 651 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 709

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
           Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V 
Sbjct: 710 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 769

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGA 168
           V    N   P+F+Q  Y+  +SE A
Sbjct: 770 VT-DLNDNPPLFEQQIYEARISEHA 793



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
           V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 764 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 817

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
           SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 818 SI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 874

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 875 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 912



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 901  VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 957

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 958  LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 1016



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
           NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 95  NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 151

Query: 152 SPVFQQNTYDVNVSEGASINSTVAT 176
           +PVF Q  Y   +SE ASINS V T
Sbjct: 152 APVFMQAEYTGLISESASINSVVLT 176



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
           +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 224 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 283

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
              +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 284 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 341

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 342 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAETLAVIT 392



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP F    
Sbjct: 2   IDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKE 61

Query: 160 YDVNVSEGASINSTVATITVSRLAS 184
           Y V +SE  SI S V  +T    +S
Sbjct: 62  YSVELSETVSIGSFVGMVTAHSQSS 86



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100 KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
           +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N   PVF 
Sbjct: 616 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 674

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V +SE + I ++V  +
Sbjct: 675 QQSYAVTLSEASVIGTSVVQV 695


>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
          Length = 4676

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 16/166 (9%)

Query: 29   QGTAASVPVS-LTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT     VS LTVN+ DINDN P         ++P I     E    +VK+ AT  D G
Sbjct: 3240 QGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDAVGTE----VVKVLATSKDTG 3295

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTI 139
            VNA++TYSI  +      KF I+ ++GVI     L     + Y +T+QA D G      +
Sbjct: 3296 VNADVTYSI--IGGNEHKKFAINNKTGVISIADMLDYERAKDYFLTIQAVDGGIPPLSNV 3353

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V++ V   N  +PVF Q +Y   + E A I   +  +  + L S
Sbjct: 3354 ATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDKILQVIATDLDS 3399



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 8/145 (5%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V ++DINDNAP    I   +QI A  +  + + ++ A D D G N+E+ YSI   S  
Sbjct: 1262 VVVKIDDINDNAPEFEQISYSVQIPASADFNQAVFQVLAFDRDSGPNSELHYSI--KSGK 1319

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV----VPGPNTRS 152
            G  KF+ID  +G++        G++Y + ++ATD G  S  +I +VSV    VP  +   
Sbjct: 1320 GKSKFKIDNTTGMVYAQKGFEPGQEYELNIKATDGGNTSKSSICKVSVHVISVPLKSKHP 1379

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PV  +    V ++EG  I   VA I
Sbjct: 1380 PVILKPPQAVKLTEGDEIGFLVALI 1404



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 45   DINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D ND+AP+    P I   A   E    I+K+ A D D G N+E+ YS  H     ++ F 
Sbjct: 2841 DENDHAPQFESSPYIIYLAENTEEGTSILKVVAHDEDQGANSEVRYSFSHDLGDMMNIFA 2900

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            ID  +G I T  KL   A  +Y   V ATD G    S++T V V  +   N    +F++ 
Sbjct: 2901 IDSHTGWISTLVKLDKEAKMEYKFYVTATDNGTPKHSARTTVIVR-LKDYNDSPTLFKKR 2959

Query: 159  TYDVNVSEGASINSTVATI 177
             Y+ +V+E A   + + T+
Sbjct: 2960 FYESSVNEDALPGTVLLTL 2978



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + + D+NDNAP     +   ++         I +  ATD D G NA++TYS+     T
Sbjct: 836 LPITVLDVNDNAPVFERSLASFRVTENALNGTAIFRANATDADAGDNAKVTYSLI----T 891

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
               F +D  +GV+  +  L    Q  Y + ++ATD GGK        S+ +V +S +  
Sbjct: 892 DTRDFAVDRTTGVLAVSNTLDRERQDLYELRIRATDGGGKGPDNPPLYSEALVRIS-IDD 950

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N  +P F    Y V + E     S VA +T S
Sbjct: 951 INDNAPKFSLPAYTVKIREDIPKGSVVAVVTAS 983



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++ATD D G    ITYSI+  S      F+ID  SG + T  +L   +Q  Y + + ATD
Sbjct: 2560 VKATDEDFGEFGTITYSIH--SELLSEIFKIDKTSGKLTTKVRLDREKQKLYEVLIMATD 2617

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             GGKS    V + V    N  +P F    Y  ++    S+N
Sbjct: 2618 GGGKSGFITVRIKVA-DENDNAPYFLLKEYQTSIHYNYSLN 2657



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 41   VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGL 98
            ++++DINDNAP+  +    ++I+    +  +V +  A+D DLG + E+ Y +    + G 
Sbjct: 946  ISIDDINDNAPKFSLPAYTVKIREDIPKGSVVAVVTASDPDLGSDGEVVYFLEDSDSDG- 1004

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVP-GPNTRSP 153
              F+ID  SG I TT  L   E+  +S+   A+D G    SS+  V + VV    N  +P
Sbjct: 1005 -TFKIDRLSGTIRTTKPLDFEERQVHSLIAFASDKGNPSLSSEASVTIYVVDVNENMHAP 1063

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            +F     +  V E   + + V  +
Sbjct: 1064 LFSDMVLNGTVKENQPVGTVVMQV 1087



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 12/183 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEA 66
            LDR+  +       V  +E+     S  + L ++  D+NDN P   LP       +  E 
Sbjct: 3119 LDREKQSKYTLTAHVHDKERLSWKCSSQIELIIS--DLNDNPPVFSLPFYSVSLPEDVEV 3176

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
               + KI ATD D+G+N +I Y+     N   + F++   SG++ T  K +  E    Y+
Sbjct: 3177 GTLVTKIHATDADIGINRKIKYAFIDSFN---NHFKMASDSGIV-TLAKPLDREIRAVYN 3232

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            +TVQA D G     ++  ++V V   N   P F    Y   V E  ++ + V  +  +  
Sbjct: 3233 LTVQAVDQGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDAVGTEVVKVLATSK 3292

Query: 183  ASG 185
             +G
Sbjct: 3293 DTG 3295



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEI 86
            G  A VPVS+   L D+ND  P         +   EA +    ++ + A DND G+N +I
Sbjct: 2308 GVYAEVPVSIV--LQDVNDCPPEFTQ-ENYNVSISEAAQFGTPVLTVIANDNDTGINKKI 2364

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV 144
            +YSI + S+     F ID   GV+     L   E   +   V A D G  S  +   V +
Sbjct: 2365 SYSIQNDSSNSSEYFYIDENEGVVYLKQALDHEEASSHHFIVVAKDLGVPSLSSTAHVWL 2424

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y   +   A+ +  V  +  S
Sbjct: 2425 TVLDMNDNPPKFEQTSYSCGLLINANRDQFVTIVKAS 2461



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEAT 76
            F   V A++         V + + + + NDN P     +  P  ++   A   +++I A+
Sbjct: 1136 FWLTVFAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTILEDSPAGSSVLQIRAS 1195

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
            D D   N +ITY I   S +    F I+  +G+I TT + +  E   ++ + VQ +D G 
Sbjct: 1196 DKDKDPNQKITYKI--TSGSPERFFSINSSTGLITTTSRKLDRETLDEHILEVQISDNGS 1253

Query: 134  K--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               SS T V V  +   N  +P F+Q +Y V +   A  N  V  +      SG
Sbjct: 1254 PPLSSTTYVVVK-IDDINDNAPEFEQISYSVQIPASADFNQAVFQVLAFDRDSG 1306



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            ++ + + D NDNAP   +L     I+ +  +   +I+++ ATD D   N ++TYSI  + 
Sbjct: 3355 TVNITVTDCNDNAPVFSQLSYSARIR-EDAQIGDKILQVIATDLDSDRNGKVTYSI--IR 3411

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
                 +F IDP SG +    +L       Y + V A D G    S QT++ +  +   N 
Sbjct: 3412 GDDREQFEIDPDSGYVSVAEELDRETTSNYVLEVLARDNGVPVLSRQTLLNIE-ISDAND 3470

Query: 151  RSPVFQQNTYDVNVSEGASI 170
              P+F Q  Y   + E   I
Sbjct: 3471 NPPIFAQTNYTTVIQEDKPI 3490



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 17/187 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            +NLDR+  +  +    V+ R+    A      + + ++D ND+ P        QI  G+ 
Sbjct: 1560 DNLDRESLD--EHILTVMVRDGGTPAKRNYARVRIIVHDHNDHVPHFSE----QILVGKV 1613

Query: 67   RRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IA 118
                     +++  A D+D G NA ITYSI  VS    + F IDP  G+I    +L   A
Sbjct: 1614 YESAVVGSAVLRAFAVDHDKGENARITYSI--VSGNFGNVFAIDPELGIISVARELDMTA 1671

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +Y + ++A D G  +  + V   + +   +   P F +      + E   + S VA +
Sbjct: 1672 NSEYMLRIKAVDHGQPALFSSVPAHIMLTMADNAPPRFTRKEIAAEIYEDQPLGSYVAHL 1731

Query: 178  TVSRLAS 184
            +V   +S
Sbjct: 1732 SVRSTSS 1738



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 16/166 (9%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRL---PMIPPIQ--IQAGEARRQIVKIEATDNDLGVNA 84
           GT       + + + D NDN P         PI   + AG +   +  + A D D G NA
Sbjct: 458 GTRKQSSAKVKIYVEDTNDNDPIFDESEKFVPIDENLPAGTS---VTTVHAKDRDRGENA 514

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-GKSSQTIV 140
            I+Y I +++      F ID  SG+I+TT  L       +Y + V+A+D G     QT +
Sbjct: 515 YISYLIANINKV---PFEIDHFSGIIKTTSLLDYESMRREYVLRVRASDWGLPYRRQTEM 571

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +++V V   N   P F++      +    SI S + T++     SG
Sbjct: 572 QLTVKVQDVNDNRPQFEKVDCIGVIPRSISIGSEIITLSAIDFDSG 617



 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 26   REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVN 83
            REK   A    V + V + D+NDN P    +P   + + +  +   I K+ A D D   N
Sbjct: 2102 REKPRVAH---VIVKVTILDVNDNCPMFVNLPYYAVVSVDDVKGSIIAKVHAIDLDSAEN 2158

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQTIVEV 142
             E+ Y +  +   G   F++   SG IE    L     +Y + + A D G    +T V V
Sbjct: 2159 GEVRYEL--IKGHG-ELFKVQRESGDIEIKQNLEGHNREYELLIAAYDKGITPCRTDVTV 2215

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              V   +   PVF++  Y   V E   ++S ++
Sbjct: 2216 H-VKVIDRSMPVFKKQFYSEVVPENVELHSPLS 2247



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 31/149 (20%)

Query: 47  NDNAP----RLPMIP---------------PIQIQAGEA---RRQIVKIEATDNDLGVNA 84
           N+N P      PM+P               P +I+  E+      +VK++A D DLG N 
Sbjct: 719 NNNKPPTEEEFPMMPTRYGQNLKSPEFIDFPAEIKVNESVALGTTLVKLKARDRDLGYNG 778

Query: 85  EITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTI 139
           ++   IY +S    H +F +D  +G ++  G L      +Y + +   D G   KS+  +
Sbjct: 779 KL---IYGISGGDKHSQFCVDMDTGELKVIGYLDRERESEYFLNITLYDLGKPQKSASRM 835

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           + ++V+   N  +PVF+++     V+E A
Sbjct: 836 LPITVL-DVNDNAPVFERSLASFRVTENA 863



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 17/100 (17%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ ND+N      P+  P +  A         + I+K+ A D DLG N EI YS    ++
Sbjct: 148 LDTNDLN------PLFYPTEYNATVFEDTPIHQSILKVVAEDADLGRNGEIYYSFAEETD 201

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
               KF I P SGVI  +  L    G  + +TV   D G 
Sbjct: 202 ----KFAIHPMSGVISLSRPLRYNEGTYHELTVLGQDRGA 237



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 18/148 (12%)

Query: 32   AASVPVSLTVNLNDINDNAPR---------LPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            +AS   ++ +++ D NDN PR         +    PI         + + I+A D D  +
Sbjct: 1786 SASATCNVIIHILDKNDNVPRFLQANYSGTISEAAPISSLILTNTSEPLVIKAFDADSEM 1845

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY---SITVQATDTGGK--SSQ 137
            NA + Y I  +       F+ID  +G I T  +L+  E Y   +  VQ +D G    +S+
Sbjct: 1846 NALLHYDIIDI--LPRRYFQIDSTTGAIRTI-RLLDHETYDKFTFHVQVSDLGNPKLTSE 1902

Query: 138  TIVEVS-VVPGPNTRSPVFQQNTYDVNV 164
            T   V  VV   N   P F Q+ Y+V +
Sbjct: 1903 TTARVDIVVTDVNDCPPKFSQSVYNVTL 1930


>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
          Length = 4637

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 16/166 (9%)

Query: 29   QGTAASVPVS-LTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT     VS LTVN+ DINDN P         ++P I     E    +VK+ AT  D G
Sbjct: 3201 QGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDAVGTE----VVKVLATSKDTG 3256

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTI 139
            VNA++TYSI  +      KF I+ ++GVI     L     + Y +T+QA D G      +
Sbjct: 3257 VNADVTYSI--IGGNEHKKFAINNKTGVISIADMLDYERAKDYFLTIQAVDGGIPPLSNV 3314

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V++ V   N  +PVF Q +Y   + E A I   +  +  + L S
Sbjct: 3315 ATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDKILQVIATDLDS 3360



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 45   DINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D ND+AP+    P I   A   E    I+K+ A D D G N+E+ YS  H     ++ F 
Sbjct: 2802 DENDHAPQFESSPYIIYLAENTEEGTSILKVVAHDEDQGANSEVRYSFSHDLGDMMNIFA 2861

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            ID  +G I T  KL   A  +Y   V ATD G    S++T V V  +   N    +F++ 
Sbjct: 2862 IDSHTGWISTLVKLDKEAKMEYKFYVTATDNGTPKHSARTTVIVR-LKDYNDSPTLFKKR 2920

Query: 159  TYDVNVSEGASINSTVATI 177
             Y+ +V+E A   + + T+
Sbjct: 2921 FYESSVNEDALPGTVLLTL 2939



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + + D+NDNAP     +   ++         I +  ATD D G NA++TYS+     T
Sbjct: 836 LPITVLDVNDNAPVFERSLASFRVTENALNGTAIFRANATDADAGDNAKVTYSLI----T 891

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
               F +D  +GV+  +  L    Q  Y + ++ATD GGK        S+ +V +S +  
Sbjct: 892 DTRDFAVDRTTGVLAVSNTLDRERQDLYELRIRATDGGGKGPDNPPLYSEALVRIS-IDD 950

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N  +P F    Y V + E     S VA +T S
Sbjct: 951 INDNAPKFSLPAYTVKIREDIPKGSVVAVVTAS 983



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++ATD D G    ITYSI+  S      F+ID  SG + T  +L   +Q  Y + + ATD
Sbjct: 2521 VKATDEDFGEFGTITYSIH--SELLSEIFKIDKTSGKLTTKVRLDREKQKLYEVLIMATD 2578

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             GGKS    V + V    N  +P F    Y  ++    S+N
Sbjct: 2579 GGGKSGFITVRIKVA-DENDNAPYFLLKEYQTSIHYNYSLN 2618



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 41   VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGL 98
            ++++DINDNAP+  +    ++I+    +  +V +  A+D DLG + E+ Y +    + G 
Sbjct: 946  ISIDDINDNAPKFSLPAYTVKIREDIPKGSVVAVVTASDPDLGSDGEVVYFLEDSDSDG- 1004

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVP-GPNTRSP 153
              F+ID  SG I TT  L   E+  +S+   A+D G    SS+  V + VV    N  +P
Sbjct: 1005 -TFKIDRLSGTIRTTKPLDFEERQVHSLIAFASDKGNPSLSSEASVTIYVVDVNENMHAP 1063

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            +F     +  V E   + + V  +
Sbjct: 1064 LFSDMVLNGTVKENQPVGTVVMQV 1087



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 12/183 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEA 66
            LDR+  +       V  +E+     S  + L ++  D+NDN P   LP       +  E 
Sbjct: 3080 LDREKQSKYTLTAHVHDKERLSWKCSSQIELIIS--DLNDNPPVFSLPFYSVSLPEDVEV 3137

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
               + KI ATD D+G+N +I Y+     N   + F++   SG++ T  K +  E    Y+
Sbjct: 3138 GTLVTKIHATDADIGINRKIKYAFIDSFN---NHFKMASDSGIV-TLAKPLDREIRAVYN 3193

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            +TVQA D G     ++  ++V V   N   P F    Y   V E  ++ + V  +  +  
Sbjct: 3194 LTVQAVDQGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDAVGTEVVKVLATSK 3253

Query: 183  ASG 185
             +G
Sbjct: 3254 DTG 3256



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEI 86
            G  A VPVS+   L D+ND  P         +   EA +    ++ + A DND G+N +I
Sbjct: 2269 GVYAEVPVSIV--LQDVNDCPPEFTQ-ENYNVSISEAAQFGTPVLTVIANDNDTGINKKI 2325

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV 144
            +YSI + S+     F ID   GV+     L   E   +   V A D G  S  +   V +
Sbjct: 2326 SYSIQNDSSNSSEYFYIDENEGVVYLKQALDHEEASSHHFIVVAKDLGVPSLSSTAHVWL 2385

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y   +   A+ +  V  +  S
Sbjct: 2386 TVLDMNDNPPKFEQTSYSCGLLINANRDQFVTIVKAS 2422



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 43/180 (23%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ---------------------------- 69
            + V ++DINDNAP    I   +QI A     Q                            
Sbjct: 1262 VVVKIDDINDNAPEFEQISYSVQIPASADFNQAVFQNDSPDDFDGADAATDDDMWDSHSP 1321

Query: 70   --------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                    + ++ A D D G N+E+ YSI   S  G  KF+ID  +G++        G++
Sbjct: 1322 ADLADLDRVFRVLAFDRDSGPNSELHYSI--KSGKGKSKFKIDNTTGMVYAQKGFEPGQE 1379

Query: 122  YSITVQATDTGGKSSQTIVEVSV----VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y + ++ATD G  S  +I +VSV    VP  +   PV  +    V ++EG  I   VA I
Sbjct: 1380 YELNIKATDGGNTSKSSICKVSVHVISVPLKSKHPPVILKPPQAVKLTEGDEIGFLVALI 1439



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEAT 76
            F   V A++         V + + + + NDN P     +  P  ++   A   +++I A+
Sbjct: 1136 FWLTVFAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTILEDSPAGSSVLQIRAS 1195

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
            D D   N +ITY I   S +    F I+  +G+I TT + +  E   ++ + VQ +D G 
Sbjct: 1196 DKDKDPNQKITYKI--TSGSPERFFSINSSTGLITTTSRKLDRETLDEHILEVQISDNGS 1253

Query: 134  K--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               SS T V V  +   N  +P F+Q +Y V +   A  N  V
Sbjct: 1254 PPLSSTTYVVVK-IDDINDNAPEFEQISYSVQIPASADFNQAV 1295



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            ++ + + D NDNAP   +L     I+ +  +   +I+++ ATD D   N ++TYSI  + 
Sbjct: 3316 TVNITVTDCNDNAPVFSQLSYSARIR-EDAQIGDKILQVIATDLDSDRNGKVTYSI--IR 3372

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
                 +F IDP SG +    +L       Y + V A D G    S QT++ + +    N 
Sbjct: 3373 GDDREQFEIDPDSGYVSVAEELDRETTSNYVLEVLARDNGVPVLSRQTLLNIEISDA-ND 3431

Query: 151  RSPVFQQNTYDVNVSEGASI 170
              P+F Q  Y   + E   I
Sbjct: 3432 NPPIFAQTNYTTVIQEDKPI 3451



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 17/187 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            +NLDR+  +  +    V+ R+    A      + + ++D ND+ P        QI  G+ 
Sbjct: 1578 DNLDRESLD--EHILTVMVRDGGTPAKRNYARVRIIVHDHNDHVPHFSE----QILVGKV 1631

Query: 67   RRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IA 118
                     +++  A D+D G NA ITYSI  VS    + F IDP  G+I    +L   A
Sbjct: 1632 YESAVVGSAVLRAFAVDHDKGENARITYSI--VSGNFGNVFAIDPELGIISVARELDMTA 1689

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +Y + ++A D G  +  + V   + +   +   P F +      + E   + S VA +
Sbjct: 1690 NSEYMLRIKAVDHGQPALFSSVPAHIMLTMADNAPPRFTRKEIAAEIYEDQPLGSYVAHL 1749

Query: 178  TVSRLAS 184
            +V   +S
Sbjct: 1750 SVRSTSS 1756



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 16/166 (9%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRL---PMIPPIQ--IQAGEARRQIVKIEATDNDLGVNA 84
           GT       + + + D NDN P         PI   + AG +   +  + A D D G NA
Sbjct: 458 GTRKQSSAKVKIYVEDTNDNDPIFDESEKFVPIDENLPAGTS---VTTVHAKDRDRGENA 514

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-GKSSQTIV 140
            I+Y I +++      F ID  SG+I+TT  L       +Y + V+A+D G     QT +
Sbjct: 515 YISYLIANINKV---PFEIDHFSGIIKTTSLLDYESMRREYVLRVRASDWGLPYRRQTEM 571

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +++V V   N   P F++      +    SI S + T++     SG
Sbjct: 572 QLTVKVQDVNDNRPQFEKVDCIGVIPRSISIGSEIITLSAIDFDSG 617



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 31/149 (20%)

Query: 47  NDNAP----RLPMIP---------------PIQIQAGEA---RRQIVKIEATDNDLGVNA 84
           N+N P      PM+P               P +I+  E+      +VK++A D DLG N 
Sbjct: 719 NNNKPPTEEEFPMMPTRYGQNLKSPEFIDFPAEIKVNESVALGTTLVKLKARDRDLGYNG 778

Query: 85  EITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTI 139
           ++   IY +S    H +F +D  +G ++  G L      +Y + +   D G   KS+  +
Sbjct: 779 KL---IYGISGGDKHSQFCVDMDTGELKVIGYLDRERESEYFLNITLYDLGKPQKSASRM 835

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           + ++V+   N  +PVF+++     V+E A
Sbjct: 836 LPITVL-DVNDNAPVFERSLASFRVTENA 863



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 17/100 (17%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ ND+N      P+  P +  A         + I+K+ A D DLG N EI YS    ++
Sbjct: 148 LDTNDLN------PLFYPTEYNATVFEDTPIHQSILKVVAEDADLGRNGEIYYSFAEETD 201

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
               KF I P SGVI  +  L    G  + +TV   D G 
Sbjct: 202 ----KFAIHPMSGVISLSRPLRYNEGTYHELTVLGQDRGA 237



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 18/148 (12%)

Query: 32   AASVPVSLTVNLNDINDNAPR---------LPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            +AS   ++ +++ D NDN PR         +    PI         + + I+A D D  +
Sbjct: 1804 SASATCNVIIHILDKNDNVPRFLQANYSGTISEAAPISSLILTNTSEPLVIKAFDADSEM 1863

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY---SITVQATDTGGK--SSQ 137
            NA + Y I  +       F+ID  +G I T  +L+  E Y   +  VQ +D G    +S+
Sbjct: 1864 NALLHYDIIDI--LPRRYFQIDSTTGAIRTI-RLLDHETYDKFTFHVQVSDLGNPKLTSE 1920

Query: 138  TIVEVS-VVPGPNTRSPVFQQNTYDVNV 164
            T   V  VV   N   P F Q+ Y+V +
Sbjct: 1921 TTARVDIVVTDVNDCPPKFSQSVYNVTL 1948


>gi|149052656|gb|EDM04473.1| rCG33481 [Rattus norvegicus]
          Length = 3111

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 23/186 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 1726 WRISSRKTLDRE--HIAKYLLRVTASDGK-FQASVPVEVFVV--DINDNSPQCSQL---- 1776

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+ R        I+K+ A D D+  NA+ITYS++     G  +F++DP +G + TT 
Sbjct: 1777 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLH---GPGAQEFKLDPHTGEL-TTL 1832

Query: 115  KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             ++  E+   Y++  +ATD GG+S Q  V +  +   N  +P F  +  DV V +  ++ 
Sbjct: 1833 TVLDRERKDVYNLVAKATDGGGQSCQAEVTLH-IEDVNDNAPRFFPSHCDVAVFDNTTVK 1891

Query: 172  STVATI 177
            + VA +
Sbjct: 1892 TPVAVV 1897



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 7/114 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
           + ++ A+D D G+N  +TYSI     +    FRIDP +GV+ ++    AGE   +T++AT
Sbjct: 23  VYRLVASDPDEGLNGSVTYSI---EESDEESFRIDPVTGVVSSSSTFAAGEYNILTIKAT 79

Query: 130 DTGGKSSQTIVEVSV--VPGPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
           D+G  +  T V + +  +P P   S P+ F ++ Y   V E   +N  V  I+V
Sbjct: 80  DSGQPALSTSVRLHIEWIPQPRPSSIPLSFDESYYSFTVMETDPVNHMVGVISV 133



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 41  VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V++ D+NDN P    +P    IQ G E    + ++ ATD DLG N  +TY          
Sbjct: 818 VSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGSVTYGF----AEDY 873

Query: 99  HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
             FRIDP  G I         A  +Y + V A D+G    QT VEV V    N  +P+FQ
Sbjct: 874 AYFRIDPYVGDISLKKPFDYQALNKYHLRVIARDSGIPPLQTEVEVHVTVR-NKSNPLFQ 932

Query: 157 QNTYDVNVSEGASINSTV 174
              Y V V E  ++ + +
Sbjct: 933 SPYYKVKVPENITLYTPI 950



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 18/175 (10%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-----IEA 75
            + ++A+   G   S    +T+++ D+NDNAPR     P            VK     + A
Sbjct: 1843 YNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRF---FPSHCDVAVFDNTTVKTPVAVVFA 1899

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGG 133
             D D G NA++ YS+   +++   +F ID  SGVI  E   ++ A     +TV+A+D G 
Sbjct: 1900 RDPDQGANAQVVYSL---TDSADGQFSIDATSGVIRLEKPLQVRASSAVELTVRASDLGT 1956

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI-TVSRLAS 184
                S+   V VSVV G     P+F    +   V E A I+  V  + T++R  S
Sbjct: 1957 PIPLSTLGTVTVSVV-GLEDYLPIFLNAEHSTQVPEDAPIDMEVLHLATLTRPGS 2010



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
             FR +V A +K     +    + VN++DINDN P+   P       +       ++K++A
Sbjct: 1104 HFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCGHLVLKVQA 1163

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
             D D+G  + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 1164 LDPDIGDTSRLEYLI--LSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASD--G 1219

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                T+         N  SP FQQN Y+  ++E A + + V
Sbjct: 1220 VFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 1260



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 15/172 (8%)

Query: 16  PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
           P +    V+ R+++       V +T+++ D N ++P    +      P     G    ++
Sbjct: 278 PSQHILTVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQLRYEANVPDTTAPG---TEL 334

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
           +++ A D D G NAEI YS    ++ G   F ID   G+I    +L  +   ++++TV+A
Sbjct: 335 LQVRAVDADRGANAEIHYSFLKGNSDGF--FNIDSLLGIITVAQRLYHVHLTRHALTVKA 392

Query: 129 TDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G   +    +V + V P  ++ +PVF ++ Y + + E   I S +  ++
Sbjct: 393 EDQGSPRRHDLALVVIHVHPS-DSSAPVFSKDEYFIEIPESVPIGSPILLLS 443



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+++ + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 1543 VSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 1602

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F +D  SG I T  +L    Q  YS  V A D G     SSQ +VEVS+    
Sbjct: 1603 GSNIHELFAVDSESGWITTLQELDCETQQTYSFYVVAFDHGQTIQLSSQALVEVSIT-DE 1661

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P F    Y  +V E       VAT+
Sbjct: 1662 NDNPPRFASEDYRGSVVENNEPGELVATL 1690



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ D+N++ PR    +     ++       I+ + A+D+D  VN+ ITYS+  V  
Sbjct: 2068 TIVINVTDVNEHHPRFTHDLYTVRVLENAVVGDVILTVSASDDDGPVNSAITYSL--VGG 2125

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I+P+ G ++   K +  EQ   YS+ ++ATD+G        EV+V V   N  
Sbjct: 2126 NQLGHFTINPKKGKLQ-VAKALDWEQTPSYSLRLRATDSGQPPLHEDTEVAVEVVDVNDN 2184

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITV 179
             P F Q  Y  +V E + I   V  + +
Sbjct: 2185 PPRFFQLNYSTSVQENSPIGIKVLQLIL 2212



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 13/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDNAP+       + I
Sbjct: 1297 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 1354

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  +R   I+++ A D D G NA++TYS+    +       ++P +GV++    L+  E
Sbjct: 1355 PSNVSRDSPIIQVLAYDADEGRNADVTYSVDSTEDLAEEIIEVNPTTGVVKVKESLVGLE 1414

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              ++   ++A D G     ++V V +      +P P    P++  +  + ++ EG+ I S
Sbjct: 1415 NRAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEIPLPKFSEPLYTFSAPE-DLPEGSEIGS 1473

Query: 173  TVA 175
              A
Sbjct: 1474 VKA 1476



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 1017 TVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGS 1076

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 FRI+  +G I T  +L     + + + V+A D G    + +T+V V+ V   N  
Sbjct: 1077 DVSKFFRINGSTGEIFTIQELDYETHQHFRVKVRAMDKGDPPLTGETLVVVN-VSDINDN 1135

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F++  Y+ NVSE A+    V  +
Sbjct: 1136 PPKFREPQYEANVSELATCGHLVLKV 1161



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTG--KLIAG-EQYSI 124
           ++++++ATD D G    + Y+I    + G  + F++DP SGV+ T G  +L +G  Q+ +
Sbjct: 226 ELLRVQATDQDHGKG--LIYTILSSQDPGSANLFQLDPSSGVLVTVGTLELHSGPSQHIL 283

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           TV   D      +  V V++ V   N  SP F Q  Y+ NV +
Sbjct: 284 TVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQLRYEANVPD 326



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 973  LMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 1031

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG+   + V  +  S   SG
Sbjct: 1032 FSQLVYTTSVSEGSPAQTPVIQLLASDQDSG 1062



 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 20/132 (15%)

Query: 43  LNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           L  I++ AP   +I       GE    +V + A+D+D   N+ + Y I  +    L  F+
Sbjct: 524 LGHISEAAPLHSLI------LGEDNSPLV-VRASDSDREANSLLVYKI--LEPEALKFFK 574

Query: 103 IDPRSGVIETTGKLIAGE----QYSITVQATDT----GGKSSQTIVEVSVVPGPNTRSPV 154
           IDP  G + TT +L   +    Q++I V    T      +S++ I+ V  V   N   P 
Sbjct: 575 IDPSMGTLTTTSELDFEDTPLFQFNIYVHDQGTPILFAPRSAKVIIHVRDV---NDSPPR 631

Query: 155 FQQNTYDVNVSE 166
           F +  Y+V V E
Sbjct: 632 FSEQIYEVAVVE 643


>gi|301613494|ref|XP_002936245.1| PREDICTED: protocadherin-11 X-linked-like [Xenopus (Silurana)
           tropicalis]
          Length = 1008

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 8/173 (4%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP   LPMI    ++      ++ KI A
Sbjct: 429 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISA 488

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G NAE++Y +   + T    F +D R+G++    KL   +Q  Y+ TV A D G 
Sbjct: 489 TDADSGRNAELSYMLGPNAPT---IFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGN 545

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            S QT   V++ V   N  SP F  N Y+  V E   +  TV  ITV+   SG
Sbjct: 546 PSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSG 598



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 12/138 (8%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           V + N+  D    G + FQV A +K     S  V +T+ + D+NDN P   +IP      
Sbjct: 622 VIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVF-VIPSNNYSY 680

Query: 61  --IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             +Q   +   +V ++ A DND G+NA++ YSI   ++ GL  F I  RSG I    KL+
Sbjct: 681 DLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGL--FAIGERSGNITLKEKLL 738

Query: 118 AGEQ---YSITVQATDTG 132
           AG+    Y + ++  D+G
Sbjct: 739 AGDHGVLYKLVIKVNDSG 756



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           ++ +++LDR+  +   +  ++   +    A S    L V + D+NDN P       I++ 
Sbjct: 199 LIVQQSLDREQKD--TYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKE-KDIEVN 255

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             E       + ++ ATD DLG NA+I +     ++N     F ID  +G+I     L  
Sbjct: 256 IPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDR 315

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASI 170
            E   + +TV A+D     S+  V +++      +P  +TR  +   N   V +SE A +
Sbjct: 316 EESPYHKLTVLASDGSSTPSRATVTINITDINDNIPSIDTRYIINPVNG-TVQLSEKAPL 374

Query: 171 NSTVATITVS 180
           N+ +A ITV+
Sbjct: 375 NTKIALITVT 384



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 33/163 (20%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------------RLPM 55
           LDR+  +  ++ F VIA++    +     ++T+++ D NDN+P              LPM
Sbjct: 526 LDREKQD--RYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPM 583

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              + +           I  TD D G NA +T S+ +  +     F IDP +GVI     
Sbjct: 584 YGTVGL-----------ITVTDADSGENAVVTLSLVNARD----NFIIDPLTGVIRPNIT 628

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G     + V+V++ V   N   PVF
Sbjct: 629 FDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVF 671



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 23/168 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  KE LDR+       +  V+A +  G++     ++T+N+ DINDN P +    +I P
Sbjct: 306 LITVKEPLDRE--ESPYHKLTVLASD--GSSTPSRATVTINITDINDNIPSIDTRYIINP 361

Query: 59  IQ--IQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           +   +Q  E      +I  I  TD D  +N ++T    H        FR+ P      ++
Sbjct: 362 VNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDV-----PFRLKPVFDNQFLL 416

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVF 155
           ET   L   +  +Y+I + A+D+G    +Q+ + +  +   N  +PVF
Sbjct: 417 ETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVF 464



 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 28/171 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDN+P  P  +  I I    A      +  A D D+GVN    Y +    
Sbjct: 121 VKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLK-- 178

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  +         Y + ++  D G   +SS  I
Sbjct: 179 --GQNVFGLD----VIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAI 232

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI--TVSRLASGCAI 188
           ++V+V    N   PVF++   +VN+ E A++ ++V  +  T + L S   I
Sbjct: 233 LQVTVT-DVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKI 282


>gi|47225228|emb|CAG09728.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1210

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           ++  +++A ++     +    + + + D NDN P  P  P IQ+   E      Q++K+ 
Sbjct: 401 EYAIKIVASDRGTPPLNTSAMVLIKIKDENDNVPIFPQ-PEIQLSIPENNDPSTQLIKLS 459

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           ATD D   NAEI Y++   +  G   F +D RSGV+    +L   +Q  Y+ TV A D G
Sbjct: 460 ATDADSEHNAEIIYTLGPDAPEG---FNVDRRSGVLSVGKRLDREKQDRYAFTVIAKDNG 516

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------ 185
             S Q+ V V  +V   N  SP F    Y+  V E   +  TV  ITV+   SG      
Sbjct: 517 STSLQSNVTVKLIVQDLNDNSPAFTHPEYNFYVPENLPLFGTVGLITVTDADSGENAVVT 576

Query: 186 CAIMNKEEN 194
            +I+N ++N
Sbjct: 577 LSILNGKDN 585



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 20/180 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+  +  ++ F VIA++   T+    V++ + + D+NDN+P     P       E   
Sbjct: 498 LDREKQD--RYAFTVIAKDNGSTSLQSNVTVKLIVQDLNDNSPAFTH-PEYNFYVPENLP 554

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               +  I  TD D G NA +T SI +    G   F IDP++GVI+        +Q  Y+
Sbjct: 555 LFGTVGLITVTDADSGENAVVTLSILN----GKDNFIIDPQTGVIKPNITFDREQQSSYT 610

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF----QQNTYDV---NVSEGASINSTVA 175
             V+A D G   S +  +V++ V   N   PVF       +YD+   N S GA +    A
Sbjct: 611 FMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTNASPGAVVTRVYA 670



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 22/193 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           ++ ++NLDR+  +   +  ++   +      S    L V ++D+NDN P      L +  
Sbjct: 171 LIVQQNLDREQKD--TYVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFKDSELEVTV 228

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL 116
           P     G +   + ++ ATD DLG NA+I ++  +  + G  + F ID  +G+I T  + 
Sbjct: 229 PENAPMGTS---VAQLHATDADLGSNAQIHFTFSNQISAGTKRHFSIDGSTGLI-TVKQS 284

Query: 117 IAGEQ---YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           +  E    + + V A+D     S+  V V+V      VP  +TR  +   N   V +SE 
Sbjct: 285 LDRELTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPTIDTRYIINLVNG-TVLLSEN 343

Query: 168 ASINSTVATITVS 180
           A +N+ +A ITV+
Sbjct: 344 APLNTKIALITVT 356



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           V K N+  D      + F V A +     +S    +T+N+ D+NDN P   +IP      
Sbjct: 594 VIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVF-VIPSSNYSY 652

Query: 64  GEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNT-------GLHKFRIDPRSGVI 110
              R        + ++ A DND G+NAE+ YSI             GL  F ID  +G I
Sbjct: 653 DLVRTNASPGAVVTRVYAIDNDTGMNAELQYSIISSIIITSRVSPRGL--FAIDKSTGNI 710

Query: 111 ETTGKLIAGEQ--YSITVQATDTGGKSS 136
               K++A +Q  + + V+  D G   S
Sbjct: 711 TLQEKIVAADQGLHRLVVKVRDLGQPES 738


>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
            sapiens]
          Length = 3841

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2551 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2608

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2609 GSSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2668

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2669 NEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2728



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3218 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3272

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3273 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3332

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3333 DNTPVFSQDTYTTVISEDAVLEQSVITV 3360



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2979 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3033

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3034 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3087

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3088 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFE 3139



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH--VS 94
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI      
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGTFG 1607

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            N G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  
Sbjct: 1608 NIG-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNA 1666

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            SP F    Y V +SE  SI S V  +T    +S
Sbjct: 1667 SPKFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1699



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAPR-LPMIPPIQIQAGE-------ARRQ-IVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P+ L     I++   E       ARR+ +  + ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3096 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3155

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3156 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3212

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3213 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3255



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3294 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3351

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3352 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDRETISG 3408

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3409 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3468



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2777 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2836

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2837 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2896

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2897 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2932



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + ++DINDN P         +   EA      +V++ ATD+D   N  I+
Sbjct: 2264 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 2322

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
            Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V 
Sbjct: 2323 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N   P+F+Q  Y+  +SE A
Sbjct: 2383 VT-DLNDNPPLFEQQIYEARISEHA 2406



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2377 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2430

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2431 SI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2487

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2488 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2525



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2514 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2570

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2571 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2629



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T    F ID  +GV+     L      ++S+ ++A D   +  Q    V V   +   N 
Sbjct: 867 T----FSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1708 NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1764

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            +PVF Q  Y   +SE ASINS V T     L    A  +K+ N+
Sbjct: 1765 APVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKDSNA 1808



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVVP------GPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1837 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1896

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1897 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1954

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1955 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAETLAVIT 2005



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y++   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N   PVF 
Sbjct: 2229 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 2287

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y V +SE + I ++V  +
Sbjct: 2288 QQSYAVTLSEASVIGTSVVQV 2308


>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
          Length = 3474

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            + F V+A +  +  A S  V +TV + DINDN P     P  +  A   +  + I+KI A
Sbjct: 2063 YNFLVVATDSGKYNARSQRVPVTVRIEDINDNKPIFTQYPFREQVAAYKQPGQTILKITA 2122

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D G N+EI YS+  V++    KFRI+P +G++  T  L A  G    + V ATD G 
Sbjct: 2123 KDADFGTNSEIVYSL--VNDGSYPKFRINPNTGILTATQSLAAENGRVIHLNVIATDKGN 2180

Query: 134  --KSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSE 166
              +SS  +VE+ V   P+ T    FQ +TY VN++E
Sbjct: 2181 PPQSSTGLVEIIVGDIPDGTPQLRFQNSTYIVNIAE 2216



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 15/194 (7%)

Query: 1   YLVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIP 57
           YLV+    LDR+  PN   +   V+A ++         ++ + + DINDNAP     +  
Sbjct: 393 YLVIVSLPLDRELQPN---YTLDVVATDRGNPPLHASRTINLMVTDINDNAPEFDQEVYQ 449

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              ++  +    ++++ ATD D G N+ I+YS+     T    F+IDPRSG++ T   + 
Sbjct: 450 ANVMEVSDPGTSVIQVLATDKDEGNNSAISYSLLDTVETHSSWFQIDPRSGLVTTRAHVD 509

Query: 118 AGEQ--YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
                   +TV ATD G      S+  +V +  V   N   P+F Q+ Y+V+V+E  +  
Sbjct: 510 CETDPVPRLTVVATDNGFPPLSSSATVLVTIHDV---NDNEPIFDQSFYNVSVAENEAEG 566

Query: 172 STVATITVSRLASG 185
             +       L SG
Sbjct: 567 RCILKFRTPGLESG 580



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 13/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREK-QGTAA-SVPVSLTVNLNDINDNAPRL--PMIPP 58
            + +KE LDR+     K  + ++A  + QGT + S  V++ +++ D+NDN P +  P    
Sbjct: 1294 ITAKEPLDRE----RKETYDLVAEARDQGTPSRSSRVAVKIHVLDVNDNVPEIIDPQEDV 1349

Query: 59   IQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKL 116
            + ++  +    ++V++ A D+D G NA ITYS+    ++ G   F+IDP +GVI T   L
Sbjct: 1350 VSVREEQPPGTEVVRVRAVDSDNGQNASITYSLLKRQDSDGYGVFKIDPLTGVIRTRMML 1409

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
               E+  Y + V A+D G    QT+  + V V   N   P F  ++    V E   I   
Sbjct: 1410 DHEEKTIYRLAVVASDAGKPPKQTVRVLRVEVLDLNDNRPTFTSSSLVFRVREDVKIGHV 1469

Query: 174  VATITVS 180
            V T+  S
Sbjct: 1470 VGTVAAS 1476



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 10/185 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            ++ + + LDR+  +       VI     G       ++T+ + D+NDNAP   +    ++
Sbjct: 1838 VITTSKYLDRETKSTYTLPIYVIDSTTPGKTLFDVATITIEVTDVNDNAPEFKINSCYRL 1897

Query: 62   QAGEARRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               E     V   + A D D+G+N EITYSI +  N G +KF ID R+G +  T K +  
Sbjct: 1898 YVPENNDIAVIHTVVAKDLDVGLNGEITYSI-NGGNVG-NKFIIDNRTGAL--TAKPLDR 1953

Query: 120  E---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            E   +Y +T+ A D G  S      ++V V   N   P F  + Y   + E  SI++++ 
Sbjct: 1954 ESHSRYYLTITAQDRGKPSMMGSCNITVMVEDQNDNDPKFDLSKYSTTIPEDISIDTSII 2013

Query: 176  TITVS 180
             +  S
Sbjct: 2014 KVHAS 2018



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 21/181 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPP-IQI 61
            LDR+  +  ++   + A+++   +     ++TV + D NDN P+  +      IP  I I
Sbjct: 1951 LDRE--SHSRYYLTITAQDRGKPSMMGSCNITVMVEDQNDNDPKFDLSKYSTTIPEDISI 2008

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                    I+K+ A+D D+ VNA I YS+   +N     FRID ++GVI T G      Q
Sbjct: 2009 DT-----SIIKVHASDADMSVNARIIYSL---ANESQWLFRIDNKTGVITTAGLFDRELQ 2060

Query: 122  --YSITVQATDTGGKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              Y+  V ATD+G  ++++  V V+V +   N   P+F Q  +   V+       T+  I
Sbjct: 2061 SVYNFLVVATDSGKYNARSQRVPVTVRIEDINDNKPIFTQYPFREQVAAYKQPGQTILKI 2120

Query: 178  T 178
            T
Sbjct: 2121 T 2121



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 22/172 (12%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDND 79
            Q T    PV     + + + D+NDNAP        +  P  ++ G A   +    A D D
Sbjct: 893  QATNGDPPVYGHTQVNIEIQDVNDNAPEFESNVVRISVPENVETGIA---LYAAHARDRD 949

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----G 133
             G N  + Y I +   TG   F +DP+ G +  T  L     +++S+ + ATDTG     
Sbjct: 950  SGANGVVRYKIVNNGATG-GLFNVDPKLGHLTLTRHLDYETTQRHSLIITATDTGIPPLS 1008

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +   +VEV  V   N   PVF++N Y  +V E   +NS +  +T   L +G
Sbjct: 1009 ANLTVLVEVQDV---NDNPPVFERNEYSKSVEESRPVNSQILQVTAVDLDTG 1057



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 34   SVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            S  +++ V + D+NDN P   R      ++ ++     QI+++ A D D G NA +TY +
Sbjct: 1008 SANLTVLVEVQDVNDNPPVFERNEYSKSVE-ESRPVNSQILQVTAVDLDTGNNARLTYRL 1066

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
               +NTG   F I P SG +   G L     ++Y +TV ATD G  S     +V V V  
Sbjct: 1067 LPGNNTG-EVFGIFPNSGWLYLKGSLDRETKDRYELTVTATDNGTPSLSATAKVLVKVSD 1125

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N   P F + +Y+ ++ E     S V  ++ +
Sbjct: 1126 ANDNDPKFMKESYEFSIEENLRSGSPVGKLSAT 1158



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 20/145 (13%)

Query: 33   ASVPV----SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAE 85
            A++P+    + ++ L D NDN P+ P+   ++   GE       +    ATD D G    
Sbjct: 2761 AAIPLCTLNTFSIELQDENDNEPKFPVSEYLEF-VGENESIGTSVFTAHATDLDKGAFGS 2819

Query: 86   ITYSI-------YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKS 135
            + YSI       Y  ++     F ID  +G++ TT  +   EQ   Y   V+ATD GGKS
Sbjct: 2820 LNYSIVSASSVNYPGTDDSWRLFNIDSSTGMV-TTNVIFDYEQQSRYVFIVRATDVGGKS 2878

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTY 160
            S   V V  +   +   P F + TY
Sbjct: 2879 SNVKVRVE-IESKDEFHPQFTERTY 2902



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P+ I+  E RR    + ATD D GVNA + Y++       L +F +   +G +  T  L 
Sbjct: 611 PLSIKITELRRYCT-VSATDPDCGVNAMVNYTLGE-GFGKLKEFEVRSATGEVCITSSLD 668

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              +  Y   V ATD GG S+  +V++ V    + R PVF    Y+V++ EG + +S
Sbjct: 669 YETRNVYEFPVVATDRGGLSTTAMVKIQVTDVNDNR-PVFYPRVYNVSLREGGASSS 724



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LVV+KE LDR+  +  +   + +         S  +++ +++ D NDN+PR P    + I
Sbjct: 1518 LVVAKE-LDRERESEYRLEVRALDTSAMNNPQSSAITVRIDIADANDNSPRWPE-DLVTI 1575

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              GE       I    ATD D G N ++ Y + H   T    F ID  +G +  +  L  
Sbjct: 1576 SLGENTAIGSSIHNFTATDVDSGSNGDVRYHLLHQYPTN-DTFTIDTLTGTLILSNSLDY 1634

Query: 119  G--EQYSITVQATD 130
               ++Y+I + ATD
Sbjct: 1635 ETVQEYTIIISATD 1648



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K +LDR+  +  ++   V A +    + S    + V ++D NDN P+  M    +    E
Sbjct: 1088 KGSLDRETKD--RYELTVTATDNGTPSLSATAKVLVKVSDANDNDPKF-MKESYEFSIEE 1144

Query: 66   ARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
              R    + K+ ATD D+G+NA I YS+      G   F+I+P S     T  L+  + +
Sbjct: 1145 NLRSGSPVGKLSATDEDIGINAVIRYSLI----PGNTSFQINPASVAGNVTEPLL--QPW 1198

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTR----SPVFQQNTYDVNVSEGASINSTVATIT 178
             + V      G +S+ +   S     NT     SP+F      + +  G  IN  +   T
Sbjct: 1199 PLDVALAGFHGHTSRAVSACSCNWITNTNFARLSPIFSPV---IALERGVGINQRMLRPT 1255

Query: 179  VSRLASG 185
            +++L +G
Sbjct: 1256 ITKLNTG 1262



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKIEAT- 76
           + F V+A ++ G + +  V + V   D+NDN P   P +  + ++ G A           
Sbjct: 675 YEFPVVATDRGGLSTTAMVKIQVT--DVNDNRPVFYPRVYNVSLREGGASSSATTPVVVV 732

Query: 77  ---DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQAT 129
              D D G    +TY I   ++ GL  FRID  SG I      +   +    + + + AT
Sbjct: 733 ATTDPDSGRFGTVTYKIVAGNDAGL--FRIDKNSGEIFVNRPNLLSSRSQPYHRLNISAT 790

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           D G   S    EV + V     R P+F+   Y  +V E     + V  +  +   SG
Sbjct: 791 DGGNLKSLADAEVFISVIDSAQRPPIFEHPRYTYSVKEDVRKETIVGNVKATVRDSG 847



 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 15/153 (9%)

Query: 39  LTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           + + + D+NDN P     R     P     G     ++++ ATD D G N +I YSI   
Sbjct: 211 VNITIQDVNDNQPIFNQSRYIATVPENATVGTT---VLQVFATDKDSGENGQIEYSINRR 267

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +   + FRIDP +G+I     L     E + + + A D G +  +T   VS+ V   N 
Sbjct: 268 QSDRDNMFRIDPTTGLIVVNKPLDFETKELHELVIVAKDHGLQPLETTAFVSIRVTDVND 327

Query: 151 RSP----VFQQNTYDVNVSEGASINSTVATITV 179
             P    +F  +     +SE A     VA I+V
Sbjct: 328 NQPTINVIFLSDDATPKISESAQPGEFVARISV 360



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 7/150 (4%)

Query: 34   SVPVSLTVNLNDINDNAPRLPM-IPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSI 90
            S  ++  V + D NDN P+  + +PP     ++     +I  + A D+D G N  +TY I
Sbjct: 1658 SSSITARVIITDSNDNPPKFVIPVPPTAFISESSSIGMKITHLVAVDSDSGDNGRVTYVI 1717

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVS-VVPGP 148
               +   L     D  +GV+     L   ++ Y + V ATD G  +    +E+  +V G 
Sbjct: 1718 SSGNEGSLFALGYD--TGVLTLAKPLPDAQRTYVLNVTATDHGTPTLHADMELKLIVQGS 1775

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                P F    Y  +V E A + + V  IT
Sbjct: 1776 EVNPPRFFNALYRADVPEDAPVGTFVTRIT 1805



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIE 74
            + R  V A+ + G        + + L DINDNAP+            E  ++   ++++ 
Sbjct: 2276 EIRLVVEAKTEGGPVLHGYCEVVMQLTDINDNAPKFTQ-QQYSASVWEGNKKGAFVLQVV 2334

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATDT 131
            A D+D G N+ I Y  + +     + F+I+P  SG+++T   L     + Y +TV ATD 
Sbjct: 2335 AFDDDEGHNSRIRY--HFLDGNHDNAFKIEPEFSGILKTNIVLDREIRDNYKLTVIATDE 2392

Query: 132  G 132
            G
Sbjct: 2393 G 2393



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 12/109 (11%)

Query: 65  EARRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
           + R++ +   ++AT  D G    I YSIY     G   FRIDP +G I T   L    + 
Sbjct: 829 DVRKETIVGNVKATVRDSGDRKNIRYSIYSGDPEGF--FRIDPSTGAIRTASALDHELRS 886

Query: 123 SITVQATDTGGK-----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           S+ +    T G       +Q  +E+  V   N  +P F+ N   ++V E
Sbjct: 887 SVLLNIQATNGDPPVYGHTQVNIEIQDV---NDNAPEFESNVVRISVPE 932


>gi|12621132|ref|NP_075243.1| protocadherin Fat 2 precursor [Rattus norvegicus]
 gi|22095688|sp|O88277.1|FAT2_RAT RecName: Full=Protocadherin Fat 2; AltName: Full=Multiple epidermal
            growth factor-like domains protein 1; Short=Multiple
            EGF-like domains protein 1; Flags: Precursor
 gi|3449286|dbj|BAA32458.1| MEGF1 [Rattus norvegicus]
          Length = 4351

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 23/186 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2966 WRISSRKTLDRE--HIAKYLLRVTASDGK-FQASVPVEVFVV--DINDNSPQCSQL---- 3016

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+ R        I+K+ A D D+  NA+ITYS++     G  +F++DP +G + TT 
Sbjct: 3017 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLH---GPGAQEFKLDPHTGEL-TTL 3072

Query: 115  KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             ++  E+   Y++  +ATD GG+S Q  V +  +   N  +P F  +  DV V +  ++ 
Sbjct: 3073 TVLDRERKDVYNLVAKATDGGGQSCQAEVTLH-IEDVNDNAPRFFPSHCDVAVFDNTTVK 3131

Query: 172  STVATI 177
            + VA +
Sbjct: 3132 TPVAVV 3137



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ + + LDR+  N  ++  +V  ++    +      + V + D+NDN P         +
Sbjct: 1193 LLTTAKQLDRE--NKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSH-KLFNV 1249

Query: 62   QAGE-----ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            +  E     +   + ++ A+D D G+N  +TYSI     +    FRIDP +GV+ ++   
Sbjct: 1250 RLSERLSPLSPEPVYRLVASDPDEGLNGSVTYSI---EESDEESFRIDPVTGVVSSSSTF 1306

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSV--VPGPNTRS-PV-FQQNTYDVNVSEGASINS 172
             AGE   +T++ATD+G  +  T V + +  +P P   S P+ F ++ Y   V E   +N 
Sbjct: 1307 AAGEYNILTIKATDSGQPALSTSVRLHIEWIPQPRPSSIPLSFDESYYSFTVMETDPVNH 1366

Query: 173  TVATITV 179
             V  I+V
Sbjct: 1367 MVGVISV 1373



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P    IQ G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGSVTYGF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D+G    QT VEV V    N  +P+FQ
Sbjct: 2114 AYFRIDPYVGDISLKKPFDYQALNKYHLRVIARDSGIPPLQTEVEVHVTVR-NKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVKVPENITLYTPI 2190



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-----IEA 75
            + ++A+   G   S    +T+++ D+NDNAPR     P            VK     + A
Sbjct: 3083 YNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRF---FPSHCDVAVFDNTTVKTPVAVVFA 3139

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGG 133
             D D G NA++ YS+   +++   +F ID  SGVI  E   ++ A     +TV+A+D G 
Sbjct: 3140 RDPDQGANAQVVYSL---TDSADGQFSIDATSGVIRLEKPLQVRASSAVELTVRASDLGT 3196

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
                S+   V VSVV G     P+F    +   V E A I+  V   AT+T
Sbjct: 3197 PIPLSTLGTVTVSVV-GLEDYLPIFLNAEHSTQVPEDAPIDMEVLHLATLT 3246



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
             FR +V A +K     +    + VN++DINDN P+   P       +       ++K++A
Sbjct: 2344 HFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCGHLVLKVQA 2403

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
             D D+G  + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 2404 LDPDIGDTSRLEYLI--LSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASD--G 2459

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                T+         N  SP FQQN Y+  ++E A + + V
Sbjct: 2460 VFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 15/172 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N ++P    +      P     G    ++
Sbjct: 1518 PSQHILTVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQLRYEANVPDTTAPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +++ A D D G NAEI YS    ++ G   F ID   G+I    +L  +   ++++TV+A
Sbjct: 1575 LQVRAVDADRGANAEIHYSFLKGNSDGF--FNIDSLLGIITVAQRLYHVHLTRHALTVKA 1632

Query: 129  TDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   +    +V + V P  ++ +PVF ++ Y + + E   I S +  ++
Sbjct: 1633 EDQGSPRRHDLALVVIHVHPS-DSSAPVFSKDEYFIEIPESVPIGSPILLLS 1683



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ D+N++ PR    +     ++       I+ + A+D+D  VN+ ITYS+  V  
Sbjct: 3308 TIVINVTDVNEHHPRFTHDLYTVRVLENAVVGDVILTVSASDDDGPVNSAITYSL--VGG 3365

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I+P+ G ++   K +  EQ   YS+ ++ATD+G        EV+V V   N  
Sbjct: 3366 NQLGHFTINPKKGKLQ-VAKALDWEQTPSYSLRLRATDSGQPPLHEDTEVAVEVVDVNDN 3424

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITV 179
             P F Q  Y  +V E + I   V  + +
Sbjct: 3425 PPRFFQLNYSTSVQENSPIGIKVLQLIL 3452



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 13/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDNAP+       + I
Sbjct: 2537 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  +R   I+++ A D D G NA++TYS+    +       ++P +GV++    L+  E
Sbjct: 2595 PSNVSRDSPIIQVLAYDADEGRNADVTYSVDSTEDLAEEIIEVNPTTGVVKVKESLVGLE 2654

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              ++   ++A D G     ++V V +      +P P    P++  +  + ++ EG+ I S
Sbjct: 2655 NRAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEIPLPKFSEPLYTFSAPE-DLPEGSEIGS 2713

Query: 173  TVA 175
              A
Sbjct: 2714 VKA 2716



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+++ + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 2783 VSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 2842

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F +D  SG I T  +L    Q  Y   V A D G     SSQ +VEVS+    
Sbjct: 2843 GSNIHELFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSIT-DE 2901

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P F    Y  +V E       VAT+
Sbjct: 2902 NDNPPRFASEDYRGSVVENNEPGELVATL 2930



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + DINDN P +  P+  P  ++       ++++EA 
Sbjct: 1103 YWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTSVLQLEAW 1162

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T+++   S   L  F + P +G++ T  +L     ++Y + V   D G  
Sbjct: 1163 DPDSSSQGKLTFNL--TSGNHLGHFIVHPFTGLLTTAKQLDRENKDEYVLEVTVQDNGDP 1220

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            S ++   V V +   N   P+F    ++V +SE  S
Sbjct: 1221 SLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLS 1256



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 FRI+  +G I T  +L     + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFRINGSTGEIFTIQELDYETHQHFRVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F++  Y+ NVSE A+    V  +
Sbjct: 2376 PPKFREPQYEANVSELATCGHLVLKV 2401



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI   +      F IDP  GVI TT  +   +    Y+  V
Sbjct: 477 VLTVTATDQDHGDNGHITYSI---AGPKAVPFSIDPLLGVISTTKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++    V++ +   +  ++  ++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLKNLNDNQPMFEEVNCTVSLRQDVPVGKSIMAVS 587



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E R     I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDRPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQ 137
                F I P SGV+   GKL      +Y + V A D   K S+
Sbjct: 189 ARSEVFAIHPTSGVVTVAGKLNVTRRGKYELQVLAVDRMRKISE 232



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTG--KLIAG-EQYSI 124
            ++++++ATD D G    + Y+I    + G  + F++DP SGV+ T G  +L +G  Q+ +
Sbjct: 1466 ELLRVQATDQDHGKG--LIYTILSSQDPGSANLFQLDPSSGVLVTVGTLELHSGPSQHIL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N  SP F Q  Y+ NV +
Sbjct: 1524 TVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQLRYEANVPD 1566



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 34/188 (18%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIPPIQIQA 63
            RD P  G   F V               L V L DINDN P       RL +  P  +  
Sbjct: 896  RDQPTKGHQLFSV-------------TDLIVTLEDINDNPPQCITEHRRLKV--PEDMPL 940

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
            G     +  ++A+D DLG   E+ Y +   ++     F++ P +G +    +L    +  
Sbjct: 941  GTV---LTFLDASDPDLGPAGEVKYILVEDAHG---TFQVHPMTGALSLEKELDFERRAG 994

Query: 122  YSITVQATDTGGK-SSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y+++  A+D+G   S +T+  V V+      N  SP F    Y   V E +   + V  +
Sbjct: 995  YNLSFWASDSGKPLSRRTLCHVEVLVMDVNENLHSPHFSSFVYQGQVQENSPAGTPVMVV 1054

Query: 178  TVSRLASG 185
            T     SG
Sbjct: 1055 TAQDDDSG 1062



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG+   + V  +  S   SG
Sbjct: 2272 FSQLVYTTSVSEGSPAQTPVIQLLASDQDSG 2302



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D+D G++ E+ Y +   + TGL  F I+  +G++ET   L       Y +TV 
Sbjct: 1051 VMVVTAQDDDSGLDGELQYFLR--AGTGLETFSINQDTGMLETLAPLDREFTPYYWLTVL 1108

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G      + EV + V   N   P   +  +  +V E A + ++V  +
Sbjct: 1109 AVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTSVLQL 1159



 Score = 36.2 bits (82), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 20/132 (15%)

Query: 43   LNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            L  I++ AP   +I       GE    +V + A+D+D   N+ + Y I  +    L  F+
Sbjct: 1764 LGHISEAAPLHSLI------LGEDNSPLV-VRASDSDREANSLLVYKI--LEPEALKFFK 1814

Query: 103  IDPRSGVIETTGKLIAGE----QYSITVQATDT----GGKSSQTIVEVSVVPGPNTRSPV 154
            IDP  G + TT +L   +    Q++I V    T      +S++ I+ V  V   N   P 
Sbjct: 1815 IDPSMGTLTTTSELDFEDTPLFQFNIYVHDQGTPILFAPRSAKVIIHVRDV---NDSPPR 1871

Query: 155  FQQNTYDVNVSE 166
            F +  Y+V V E
Sbjct: 1872 FSEQIYEVAVVE 1883



 Score = 36.2 bits (82), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTV + D NDN PR    PP   Q       E    I +++  D D   N  + Y++   
Sbjct: 806 LTVTVKDWNDNPPRF---PPGGYQLTISEDTEVGTTIAELKTEDADSEDNRRVRYTLL-- 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
             T   KF + P +G +  TG L   +  QY +  +A D   K  Q
Sbjct: 861 --TPTEKFSLHPFTGELVVTGHLDRESESQYILKAEARDQPTKGHQ 904


>gi|224067665|ref|XP_002195148.1| PREDICTED: protocadherin Fat 2 [Taeniopygia guttata]
          Length = 4428

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 21/193 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  +V+A + +  A +    + + + DINDN+P    I    
Sbjct: 2967 WTISSKKPLDRE--DTEKYLLKVVASDGKFQATT---EVEIFVLDINDNSPECGQI---- 3017

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G           I+KI ATD D+G NA+ITYS++     G  +FR+ P +G + T+ 
Sbjct: 3018 LYTGRVSEDAGPGLLILKISATDPDVGSNAQITYSLH---GPGAEEFRLGPHTGELSTSA 3074

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  Y +  +ATD GG+S Q  V + ++   N  +P F  +   V V +  +  +
Sbjct: 3075 SLDREQKPTYHLVAKATDGGGRSCQADVTL-IIEDTNDNAPRFFPSHCAVAVFDNTTTKT 3133

Query: 173  TVATITVSRLASG 185
             +A +    L  G
Sbjct: 3134 PIAVVAARDLDEG 3146



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 21/180 (11%)

Query: 17   GKFRFQV-------IAREKQGTAASVPVSLTV-NLNDINDNAPRL---PMIPPIQIQA-- 63
            G   F+V       I   ++G+A+   V++ V N+ DIND+AP     P    I+  A  
Sbjct: 3282 GSLDFEVSHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFTDIREDAAI 3341

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--Q 121
            GE    I+ + A D D  +N +ITYSI  V    L  F I P++G I     L   E   
Sbjct: 3342 GEI---ILTVSADDLDGSMNNQITYSI--VEGNPLGHFAIQPKNGQISIAKHLDREEIPS 3396

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TV+ATD G  +  + V V V V   N   P F Q  Y V V E A + ++V  + +S
Sbjct: 3397 YALTVRATDNGHPAQFSDVPVHVHVSDVNDNPPRFFQLNYSVVVQENAPVGTSVLELIMS 3456



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P     ++   +   ++++ A D D G   ++TYS+   S
Sbjct: 2785 VSVNIQVQDVNDNRPVFEADPYRAFVMENMPSGTTVIQVTANDQDTGSAGQVTYSLEAES 2844

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGPN 149
                  F ID  SG I T  +L   +Q  Y   V ATD G K   SSQT+VEV+ V   N
Sbjct: 2845 GNLRGLFTIDGESGWITTLKELDCEDQEIYRFYVVATDHGRKVQLSSQTLVEVT-VSDEN 2903

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +P F  + Y  +V E A     + T++
Sbjct: 2904 DNAPQFTSDFYKGSVIENAEPGQVIVTLS 2932



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 11/149 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + + + D ND+ P  P    M+   + +A E    + ++ A+D D G N++ITY+I    
Sbjct: 1231 VVIQVLDANDSPPSFPHKLFMVQLPEREASETPLPVYRLIASDRDQGQNSQITYTI-EEE 1289

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV--PGPNT 150
              G+  F I+P +G + +     A E   +TV+ATD G    SS   + +S V  PGP++
Sbjct: 1290 EEGI--FTINPTTGTVFSRKAFPASEYNILTVKATDGGSPPLSSHVRLHISWVTRPGPSS 1347

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITV 179
                F +  ++  V E   +N  V  I++
Sbjct: 1348 EPLAFDEPHFNFAVMETDPVNHMVGVISI 1376



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGE 65
            +LDR+     K  + ++A+   G   S    +T+ + D NDNAPR  P    + +     
Sbjct: 3075 SLDRE----QKPTYHLVAKATDGGGRSCQADVTLIIEDTNDNAPRFFPSHCAVAVFDNTT 3130

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
             +  I  + A D D G+NAE+ YS+   S++    F I+  +GVI     L   +   + 
Sbjct: 3131 TKTPIAVVAARDLDEGLNAEVVYSL---SDSANGHFSIEETTGVIRLEKPLKDSQHSAFE 3187

Query: 124  ITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +TV ATD G     SS   V VSVV   N   PVF    Y   V E  ++ + V  ++V
Sbjct: 3188 LTVCATDRGTPQPLSSLGTVTVSVV-DLNEYLPVFLAPEYVAMVKEDVAVGTEVLNLSV 3245



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 5/118 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            +++++ A D D G NAEI YS+   +  G   F IDP SG++    KL     E++++ V
Sbjct: 1576 EVIQVRALDQDQGANAEIRYSLQAGNGEGF--FSIDPYSGIVTVAQKLDPSRQERFTLIV 1633

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            +A D G    +    V V   P+ R+ P F +  Y   +SE  +I S +  ++ + L+
Sbjct: 1634 KAEDQGFPQLKDSATVHVHIRPSDRTPPKFLEAEYITEISESTAIGSPLIQVSATSLS 1691



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 16/165 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVK 72
            +FR +V A +      S    + V++ DINDN P    +   Q +A           ++K
Sbjct: 2347 QFRMKVRAADHGVPPLSSDALVIVDVTDINDNPPEFSQL---QYEAKVSEMATCGHIVIK 2403

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++A D D G    + Y I  +S      F I+  SG+I    +     +  Y++ V A+D
Sbjct: 2404 VQALDPDSGDTTRLEYVI--LSGNDNRHFAINSTSGIISMFNRCKKDLEPSYNLRVSASD 2461

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               KS+   V V +     N  SP FQQN Y+  ++E A I + V
Sbjct: 2462 GVFKST---VPVYINTTNANKYSPTFQQNVYEAELAENAEIGTKV 2503



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P+   +P    +Q G E    + ++ ATD D+G N  +TYS      
Sbjct: 2058 TVRVYVEDVNDNPPQFENVPYYATVQDGTEPGDVLFQVSATDKDIGDNGAVTYSFAE--- 2114

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 FRIDP  G I     L   A  +Y++ V A D G        EV V+   N  +P
Sbjct: 2115 -EYKYFRIDPYLGDISLKRPLDYQALNKYNLRVIAKDKGEPPLHAEEEV-VISVRNRSNP 2172

Query: 154  VFQQNTYDVNVSE 166
            +FQ   Y V V E
Sbjct: 2173 LFQSLYYRVKVPE 2185



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 8/114 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ ++ATD D G N  +TYSI   +N     F IDP SGVI T+  +   +    Y + V
Sbjct: 480 VLTVKATDEDKGDNGFVTYSI---ANQKSVPFVIDPYSGVIFTSKSMDYELMQRWYHLRV 536

Query: 127 QATDTGGK-SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A+D G     +T V VS+ +   N  +PVF++ +    +     + S VAT++
Sbjct: 537 WASDWGSPFRHETEVYVSLTLSNVNDNAPVFEKASCSGTIPRDFPVGSPVATVS 590



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 11/155 (7%)

Query: 39   LTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            L V L D+NDN P+ LP +  +++        I+  +EA D D G   E+ YS+  ++N 
Sbjct: 913  LIVTLEDVNDNTPQCLPALNSVKVPEDLPVGTILLFLEAFDPDAGSGGEVRYSL--INNE 970

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNT 150
             +  F +D  +G +    +L   ++  Y++TVQ +D G    +SS   +EV+V+    N 
Sbjct: 971  EM-MFHVDKLTGALRLEKELDYEKRDSYNLTVQVSDGGKPFSRSSLCHLEVNVIDVNENL 1029

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              P F    +   V E +   ++V  +T   +  G
Sbjct: 1030 NPPRFASFIFKGWVQENSPKGTSVMMVTAKDIDRG 1064



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 24  IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDL 80
           I  + QG       SL  NL+ IN NAP+     P  I   E       I  + ATD D 
Sbjct: 689 IESQSQGHGQDDETSL--NLHLINHNAPKFDDSFPRSIDIIETVPINSTIADLSATDPDT 746

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKS 135
           G + ++ Y I   ++     F ID   G+++    L   EQ S     ITV    T  KS
Sbjct: 747 GFSGKLVYVISDGNDDSC--FTIDLERGLLQVLSPL-DHEQTSFYILNITVYDLGTPQKS 803

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           S  ++ V+V+   N  +P F Q +Y V + E  +  +T+A +
Sbjct: 804 SWKLLAVNVL-DTNDNTPKFTQASYWVAIPEHVAAGTTIAQL 844



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 27/153 (17%)

Query: 41   VNLNDINDNAPRLPMI----------PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            V + DINDN P    I          PP        +  +V++ A+D D G N  ++Y I
Sbjct: 2263 VEVEDINDNPPIFSQIIYTASVSESLPP--------QTPVVQLFASDKDSGRNKVVSYQI 2314

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSV 144
                +     F ID  +G I T   L     +Q+ + V+A D G       +  IV+V+ 
Sbjct: 2315 MDDGSDAAKFFNIDASTGHITTAQALDYETNQQFRMKVRAADHGVPPLSSDALVIVDVTD 2374

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +   N   P F Q  Y+  VSE A+    V  +
Sbjct: 2375 I---NDNPPEFSQLQYEAKVSEMATCGHIVIKV 2404



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P        + I
Sbjct: 2540 IATLQKLDRENSTERVIAIKVMAKDGGGKVAFCTVKII--LTDENDNPPLFKASEYTLSI 2597

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++ YS+  V +       I+  +GV++    LI  E
Sbjct: 2598 QSNVSKGSPVIQVLAYDADEGANADVIYSVDSVEDVTEDLVEINAATGVVKVKESLIGLE 2657

Query: 121  Q--YSITVQATDTGGKSSQTIVEVS--VVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               ++  V+A D       ++V V+  +VP   T  P F +  Y  + SE     S + +
Sbjct: 2658 NRAFNFKVKAEDGRPPHWNSLVPVNLQIVPREVTL-PRFSEPLYTFSASEDLPEGSEIGS 2716

Query: 177  I 177
            +
Sbjct: 2717 V 2717



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPN 149
            V    L  F  D ++GV+  TG+L      +++ TV+ATDT  G  S+  VEV V    N
Sbjct: 2211 VEEDSLKLFNTDFKTGVLTVTGQLDYELETKHTFTVRATDTALGSFSEARVEVEV-EDIN 2269

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               P+F Q  Y  +VSE     + V  +  S   SG
Sbjct: 2270 DNPPIFSQIIYTASVSESLPPQTPVVQLFASDKDSG 2305


>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
 gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
            member 7; AltName: Full=Cadherin-related tumor suppressor
            homolog; AltName: Full=Protein fat homolog; Contains:
            RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
            Precursor
          Length = 4588

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  +  + ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             K   SS  IV+V+V    N   P F    Y   VSE       +A ++ +
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPQGGVIAILSTT 2943



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + ++DINDN P         +   EA      +V++ ATD+D   N  I+
Sbjct: 2261 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 2319

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVS 143
            Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V 
Sbjct: 2320 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 2379

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N   P+F+Q  Y+  +SE A
Sbjct: 2380 VT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2428 SI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2626



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIVTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T    F ID  +GV+     L      ++S+ ++A D   +  Q    V V   +   N 
Sbjct: 867 T----FSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAETLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y++   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D   + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDARRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N   PVF 
Sbjct: 2226 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 2284

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y V +SE + I ++V  +
Sbjct: 2285 QQSYAVTLSEASVIGTSVVQV 2305


>gi|291387668|ref|XP_002710368.1| PREDICTED: FAT tumor suppressor 2 [Oryctolagus cuniculus]
          Length = 4349

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2966 WRISSKKILDRE--HLAKYLLRITASDGK-FQASVPVEIFVL--DINDNSPQCSQL---- 3016

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G  R        I+K+ ATD D   NA+ITYS++     G ++F++DP +G + T  
Sbjct: 3017 LYTGRVREDASPGHFILKVSATDLDTDTNAQITYSLH---GPGANEFKLDPHTGELTTFT 3073

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3074 GLDRERKDIYSLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCSVAVFDNTTVKT 3132

Query: 173  TVATI 177
             VA +
Sbjct: 3133 PVAVV 3137



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 23/191 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    A      + V + D+NDN P         R
Sbjct: 1193 LLTTAKQLDRE--NKEEHILEVTVLDHGEPALKSTSRVVVRVLDVNDNPPVFSHKLFNVR 1250

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            LP     +  +  +   + ++ A+D D G+N  ITYS+      G H   IDP +G++ +
Sbjct: 1251 LP-----ERLSPTSPGPVYRLVASDLDDGLNGRITYSVEDSDEEGFH---IDPVTGMVSS 1302

Query: 113  TGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEGA 168
            +    AGE   +T++ATD G    S+   + +  +P P   S P+ F +  Y   V E  
Sbjct: 1303 SRTFTAGEYNILTIKATDGGQPPLSASVRLHIEWIPAPRPSSIPLAFDETHYSFTVMETD 1362

Query: 169  SINSTVATITV 179
             +N  V  I+V
Sbjct: 1363 PVNHMVGVISV 1373



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            K+   +    K   + S   ++ VN+ D+N++ PR    +     +++      ++ + A
Sbjct: 3288 KYFLSIECSRKGSASLSDMTTILVNVTDVNEHRPRFRQELYGTRVLESAVVGAVVLTVSA 3347

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ V+ATD+G
Sbjct: 3348 TDEDGPLNSAITYSL--VGGNQLGHFTIHPKKGELQ-VAKALDWEQTPSYSLRVRATDSG 3404

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                   ++V++ V   N   P F Q  Y   V E A I S V  + +S
Sbjct: 3405 QTPLHEDIDVAIQVVDVNDNPPRFFQLNYSTTVQENAPIGSKVLELILS 3453



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + + DINDN P+   +P   I Q G E    + ++ ATD DLG N  +TY+         
Sbjct: 2058 IYVEDINDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGANGIVTYAF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FR+DP  G I         A  +Y + V A D G  S QT  EV +V   N  +P+FQ
Sbjct: 2114 TYFRMDPYLGDISLRKPFDYQALNKYHLKVIARDGGTPSLQTQEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            + ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3083 YSLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCSVAVFDNTTVKTPVAVVFARDP 3142

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+   +++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3143 DQGSNAQVVYSL---TDSAEGHFSIDATTGVIRLEKPLRVRPQAALELTVRASDLGTPIP 3199

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3200 LSTLGTVTVSVV-GLEDYLPVFLSPEHGVRVPEDA 3233



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASGYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  ++   ++++ A D D G NA++TYS+  + +       ++P +GV++    L+  E
Sbjct: 2595 PSNVSKDSPVIQVLAYDADEGRNADVTYSVDSMEDLAEEIIEVNPTTGVVKVKESLVGLE 2654

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               +   ++A D G     ++V V +   PN  S P F +  Y  + SE     S V  +
Sbjct: 2655 NQAFDFKIKAQDGGPPHWDSLVPVRLQVVPNEVSLPKFSEPLYSFSASEDLPEGSEVGVV 2714



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 2783 VSVNIQVKDVNDNRPVFEADPYRAFLTENMPGGTTVIQVTANDQDTGNDGQVSYRLSSDP 2842

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVSV    
Sbjct: 2843 GSNIHELFAIDSETGWITTLQELDCETRQNYQFYVVAYDHGQTVQLSSQALVEVSVT-DE 2901

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2902 NDNAPQFASEDYRGSVVENSEPGELVATL 2930



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + P           P  I  G    ++
Sbjct: 1518 PSEHTLTVMVRDQEMPIKRNFVWVTIHVEDGNLHPPHFTQHHYEASVPDTIAPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQA 128
            +++ ATD D G NAE+ YS+  +    +  F ID   G+I    KL      ++++TV+A
Sbjct: 1575 LQVRATDADRGANAEVRYSL--LKGNSVDFFSIDALLGIITVVQKLDQTNRVRHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V ++  P ++ +P+F +  Y + + E  SI +  A + VS  +S
Sbjct: 1633 EDQGSPQRHDLATVIILVYPSDSSAPIFSKAEYFIEIPE--SIPAGSAILLVSATSS 1687



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVVVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGQNQDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G I T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEISTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I K+ ATD DLG NAE  Y+     NT    F I P SGV+   GKL      +Y +
Sbjct: 164 RSPICKVTATDADLGQNAEFYYAF----NTRSEMFAIHPTSGVVTVAGKLNVTWRGKYEL 219

Query: 125 TVQATD 130
            V A D
Sbjct: 220 QVLAVD 225



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 11/161 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI---QIQAG-EARRQIVKIE 74
            +   V+A ++     S    + + + D+NDN PR  M  P+    IQ G      ++++E
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDVNDNPPR--MHRPVFYTSIQEGVPVGTSVLQLE 1160

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG 132
            A D D     ++T++I    + G   F I P +G++ T  +L     E++ + V   D G
Sbjct: 1161 AWDPDSSSKGKLTFNITSGDHVGF--FAIHPFTGLLTTAKQLDRENKEEHILEVTVLDHG 1218

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              + ++   V V V   N   PVF    ++V + E  S  S
Sbjct: 1219 EPALKSTSRVVVRVLDVNDNPPVFSHKLFNVRLPERLSPTS 1259



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             F  +V A ++     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2344 HFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA 2403

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
             D D    + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 2404 LDPDSKDTSHLEYLI--LSGNQDRHFTINSSSGIISMFNLCKKQLDSSYNLRVGASD--G 2459

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                T+         N  SP FQQ+ Y+  ++E A + + V
Sbjct: 2460 VFRATVPVYINTTNANKYSPEFQQHVYEAELAENAKVGTKV 2500



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV VV   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-VVEDINDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   +      F++DP SGV+ T GKL       ++++
Sbjct: 1466 ELLRVQATDQDKGKG--LIYTIHSSQDPESASLFQLDPSSGVLVTVGKLDLSSGPSEHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q+ Y+ +V +
Sbjct: 1524 TVMVRDQEMPIKRNFVWVTIHVEDGNLHPPHFTQHHYEASVPD 1566



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L VN+ D NDNAPR P     Q+   +  E    I +++  D D   N  + YS+     
Sbjct: 806 LPVNVKDWNDNAPRFPA-GGYQLTISEDTEVGTTIAELQTKDADSEDNGRVRYSLL---- 860

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           T   KF + P +G +  TG L   +  Q+ + V+A D   K  Q
Sbjct: 861 TPTEKFSLHPLTGELVVTGPLDRESEPQHILKVEARDQPRKGHQ 904



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 24/158 (15%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRL-------PMIPPIQIQAGEARR 68
            F+F V   + QG+    A  P  + +N+ D+ND+ PR         ++ PI         
Sbjct: 1836 FQFSVYVHD-QGSPILFAPKPAKVIINVRDVNDSPPRFSEQIYEVAVVGPIH-----PGM 1889

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            +++ ++A D D    +E++YSI   +  G     I P +G I        G    +T++A
Sbjct: 1890 ELLTVQARDED----SEVSYSIKTGNTDG--AVAIHPITGCISVLNPAFLGLSRKLTIRA 1943

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G      +V++S+    +T S  F Q+ Y   V E
Sbjct: 1944 SD-GLYQDTCLVKISLTQIIDT-SLRFDQDVYKATVKE 1979


>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
          Length = 1338

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 9/181 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 472 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 529

Query: 62  QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
            +  A+   +VK+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 530 GSSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 589

Query: 119 GEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E ++  V+A D G   K S  +V V ++P P  + P F +  Y   VSE   I + +  
Sbjct: 590 NEFFTFFVRAVDNGSPSKESVVLVYVKILP-PEMQLPKFSEPFYTFTVSEDVPIGTEIDL 648

Query: 177 I 177
           I
Sbjct: 649 I 649



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 1139 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 1193

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 1194 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 1253

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 1254 DNTPVFSQDTYTTVISEDAVLEQSVITV 1281



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 900  WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 954

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 955  TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 1008

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 1009 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFE 1060



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 1017 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 1076

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 1077 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 1133

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 1134 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 1176



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19  FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
           ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 698 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 757

Query: 76  TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 758 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 817

Query: 133 GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 818 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 853



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
           T A   V + + ++DINDN P         +   EA      +V++ ATD+D   N  I+
Sbjct: 185 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 243

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
           Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V 
Sbjct: 244 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 303

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGA 168
           V    N   P+F+Q  Y+  +SE A
Sbjct: 304 VT-DLNDNPPLFEQQIYEARISEHA 327



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 20/162 (12%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAE 85
           S  V +TV++ D+NDN P        + Q  EAR          +  ++A D D     +
Sbjct: 295 SSDVIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDK 348

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVS 143
           + YSI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+
Sbjct: 349 LQYSI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVT 405

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V+ G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 406 VIGG-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 446



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
           +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 435 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 491

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 492 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 550

Query: 186 C 186
            
Sbjct: 551 S 551



 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100 KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
           +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N   PVF 
Sbjct: 150 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 208

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V +SE + I ++V  +
Sbjct: 209 QQSYAVTLSEASVIGTSVVQV 229


>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
            sapiens]
          Length = 3377

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 13/153 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              +PVF Q+TY   +SE A +  +V T+T SR 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVTRSRF 3362



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAPR-LPMIPPIQIQAGE-------ARRQ-IVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P+ L     I++   E       ARR+ +  + ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR  Q      ASV VS+ V   D NDN+P     P     ++      ++++I
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVK--DANDNSPVFESSPYEAFIVENLPGGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2892 HGEKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + ++DINDN P         +   EA      +V++ ATD+D   N  I+
Sbjct: 2261 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 2319

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
            Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V 
Sbjct: 2320 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 2379

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N   P+F+Q  Y+  +SE A
Sbjct: 2380 VT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2428 SI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2626

Query: 186  C 186
             
Sbjct: 2627 S 2627



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            +PVF Q  Y   +SE ASINS V T     L    A  +K+ N+
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKDSNA 1805



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T    F ID  +GV+     L      ++S+ ++A D   +  Q    V V   +   N 
Sbjct: 867 T----FSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPTFIPPNYRVKVRE 938



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAETLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y++   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N   PVF 
Sbjct: 2226 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 2284

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y V +SE + I ++V  +
Sbjct: 2285 QQSYAVTLSEASVIGTSVVQV 2305


>gi|442768496|gb|AGC70195.1| protocadherin-like protein, partial [Stylophora pistillata]
          Length = 2608

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 15/156 (9%)

Query: 38   SLTVNLNDINDNAPRL--PMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+TV + DINDNAP    P      P  I  G +   ++ +EA+D D G N  ITY  + 
Sbjct: 1154 SVTVTVQDINDNAPTFKKPFYEKAVPEDIPVGSS---VLTVEASDPDAGSNGMITY--FF 1208

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             SN G+  F ID R+GVI TT +L     ++Y++++ A D G  +   +V V++ V   N
Sbjct: 1209 ASNPGV--FTIDARTGVITTTARLDREKHDRYTLSIGAKDHGNPNQSHVVFVTIHVLDVN 1266

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              SP F  N+  VN+ E  +I + V T+T     +G
Sbjct: 1267 DNSPRFVNNSIFVNIPEKQAIGTVVTTVTAKDEDTG 1302



 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 9/146 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEA 75
            K++ +++AR++   + S  + +TV + D NDN P   M P  +Q+Q G      +  I+A
Sbjct: 1342 KYQLRIVARDQGQNSQSSFLYVTVYVLDSNDNRPTFEMNPVTVQLQEGVPLNTNVTTIKA 1401

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
             D D G N+ I YSI   S  G  KF++DP +GV++T G +   A ++Y++ ++ATD   
Sbjct: 1402 HDYDSGQNSWIRYSIDSQS-PGPAKFKVDPSTGVVQTIGSIDREAVDEYTLNIRATDQAF 1460

Query: 134  KSSQ----TIVEVSVVPGPNTRSPVF 155
              S+    T+    +V   N   P+F
Sbjct: 1461 TESERLSSTLTIFIIVSDVNDNKPIF 1486



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 9/176 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           FR  + A+++     +      +N+ DINDN P+      I + +  A     +V   AT
Sbjct: 403 FRVYIYAKDRGDPQQTTQDGFILNVGDINDNPPKFDQDVFIAVVSENATIGTSVVVAHAT 462

Query: 77  DNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL----IAGEQYSITVQATD 130
           D D+G NA++ Y+I + S   L+K  F+ID  +G I T+ +L     A  ++ +TV  + 
Sbjct: 463 DKDIGSNAKLVYNISYTSQATLYKTWFQIDQATGEIRTSARLDREKFARLEFLVTVTDSG 522

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               S+   V V++    N   P+F +  Y   V+E ++ N++V  +  + + SG 
Sbjct: 523 VPALSANCTVIVNITDA-NDNDPIFTKAVYFSTVNENSANNTSVLQVLANDIDSGI 577



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEA 66
           LDR+     +  F V   +    A S   ++ VN+ D NDN P            +    
Sbjct: 504 LDRE--KFARLEFLVTVTDSGVPALSANCTVIVNITDANDNDPIFTKAVYFSTVNENSAN 561

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLIAGEQ-- 121
              ++++ A D D G+N  + YS+        H+   F IDP +G++ T+G++    Q  
Sbjct: 562 NTSVLQVLANDIDSGINGIVHYSL-----ATQHRRVPFSIDPNTGLLSTSGQIDFEAQSL 616

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
           Y I V A+D GG+  ++I+ +SVV   N   PV     YDV+V E  +I+  VAT+    
Sbjct: 617 YVINVVASDGGGRLDKSILNISVV-DENDNYPVINPIIYDVSVYENLTIDDVVATVMAKD 675

Query: 182 LASGC 186
             SG 
Sbjct: 676 NDSGI 680



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 14/149 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVS 94
            ++TVN+ D+NDNAP   +    Q    E   Q   I+K+ A D D G N E+TY+     
Sbjct: 2308 TVTVNVKDVNDNAPEF-LESSYQATLSEETDQGTSILKVSAEDRDDGSNRELTYAFV--- 2363

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             T L  FR++  SGVI T  K+ A ++   Y + V A D G       V V +      R
Sbjct: 2364 -TSLDLFRLNTTSGVIYTAKKIEASDRDSFYFVLVSAVDRGVPQQHAFVMVQIRIN---R 2419

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P+F++  Y   ++E     +TV T++ +
Sbjct: 2420 KPMFKEPAYRARIAEDTLPGTTVLTVSAA 2448



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 16/196 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI- 59
            +L ++++ LDR+      +RF V+A +K     S    + V ++DIND+ P+      I 
Sbjct: 1017 WLFITRQ-LDREQQEV--YRFTVVATDKGHIPKSSTADVIVYIDDINDHNPKFTQQAYIF 1073

Query: 60   QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             +   +  R  V ++ A+D D G NA+I+Y+    S     +F ID  +G+I  T +++ 
Sbjct: 1074 SVNENQPNRTFVGQVPASDKDAGANAKISYTFEPPS----LEFAIDHNTGIIR-TNQVLN 1128

Query: 119  GEQ---YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ   Y +TV+A D G   ++  T V V+ V   N  +P F++  Y+  V E   + S+
Sbjct: 1129 REQRSSYILTVKANDHGTSPRTDHTSVTVT-VQDINDNAPTFKKPFYEKAVPEDIPVGSS 1187

Query: 174  VATITVSRLASGCAIM 189
            V T+  S   +G   M
Sbjct: 1188 VLTVEASDPDAGSNGM 1203



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 12/124 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR-------RQI 70
            FR ++I   K   + +  ++L VNL D+NDN P   P    +Q+   +         R +
Sbjct: 2078 FRLRIIVSRKSQPSRNDYLTLHVNLTDVNDNKPVFYPANISVQLLEDDGSQSSSFTVRSV 2137

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
              +  TD D G N E+TY I  +S     KF I+ + G++ T G L   +   Y + V A
Sbjct: 2138 ANLTTTDKDSGKNQEVTYKI--ISGNVDDKFAINAQLGLLTTKGFLDREKHAVYDLVVNA 2195

Query: 129  TDTG 132
            TD G
Sbjct: 2196 TDKG 2199



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 7/158 (4%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYH 92
            S  +++ + ++D+NDN P         +   E     ++ I A DNDLG NA++ Y I H
Sbjct: 1467 SSTLTIFIIVSDVNDNKPIFVSPNETYVMEDEGFDYPVITITAIDNDLGSNAKVKYRIEH 1526

Query: 93   VSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPG 147
              N     KF ++  +G+++  G L      +Y + +  TD G   + S  ++ V VV  
Sbjct: 1527 DENRDSFRKFALNAATGLLKLVGNLDHETTPKYVLNISVTDGGTPPQFSFQLLTVFVV-D 1585

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N   P F Q+ +  NVSE   + + V  ++   L SG
Sbjct: 1586 VNDNGPEFNQSLFLGNVSENQPVGTPVMAVSAYDLDSG 1623



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 9/189 (4%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            ++ +   LDR+  +  ++   + A++      S  V +T+++ D+NDN+PR       + 
Sbjct: 1223 VITTTARLDREKHD--RYTLSIGAKDHGNPNQSHVVFVTIHVLDVNDNSPRFVNNSIFVN 1280

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            I   +A   +V  + A D D G N ++ Y+I      G   F I+  SGVI     L   
Sbjct: 1281 IPEKQAIGTVVTTVTAKDEDTGNNGKVRYTIDQ--GNGGKVFEINETSGVIALRKPLDFE 1338

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               +Y + + A D G  S  + + V+V V   N   P F+ N   V + EG  +N+ V T
Sbjct: 1339 KKSKYQLRIVARDQGQNSQSSFLYVTVYVLDSNDNRPTFEMNPVTVQLQEGVPLNTNVTT 1398

Query: 177  ITVSRLASG 185
            I      SG
Sbjct: 1399 IKAHDYDSG 1407



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
            + +T+ + D NDN+P+  +     +   E  +    I++ +A D D G N EIT+S+   
Sbjct: 1786 IYVTIFVGDKNDNSPKF-VNSSYSVNIRELTKIGTPILRAQANDIDSGKNGEITFSL--- 1841

Query: 94   SNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S+  L  FRID ++G I T  +        Y+   +ATD G    +T V V+V +   N 
Sbjct: 1842 SSDALGIFRIDSKTGTIYTLQEFDYYITAAYNFLCRATDKGVAPRETSVGVTVSIIDENN 1901

Query: 151  RSPVFQQNTYDVNVSEGASI 170
             +PVF    Y+  +  G+S+
Sbjct: 1902 HAPVFDAIPYEATIVSGSSV 1921



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 25/147 (17%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           V+  +N+ DINDN P   ++     +  E      ++ A D+DLG  A   YSI  +S  
Sbjct: 88  VTFFINVTDINDNIPTF-LVGGYDFEFYEGNPVGARVTAVDDDLGSYAVQNYSI--ISGN 144

Query: 97  GLHKFRIDPRSGVIETTGKLIA------GEQ--------YSITVQATDTGGKSSQT---I 139
             + F +   +  ++  G+L A      G+Q        YS+TV A+D GG   QT   +
Sbjct: 145 TDNMFAL---TEYVDAVGRLGAKIELQPGKQLDREQRDLYSLTVSASD-GGTPPQTGFGL 200

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           V ++V+   N   PVF    Y+ NV+E
Sbjct: 201 VNITVL-DVNDNDPVFNPKYYNPNVTE 226



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 10/161 (6%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARR 68
            D   P ++   V+A +      +   +  V + D+ND+ P+            E   A  
Sbjct: 921  DFEGPRQYLIIVLAEDGGSPPLNSTATFRVTVVDVNDHTPKFSN-KSYSTHVDEHTPAGT 979

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
             I+ + ATD D G NA I+YS     +T +   R    +G +  T +L   +Q  Y  TV
Sbjct: 980  NILNVSATDADTGNNALISYSFQSGVDTSMFGLR---SNGWLFITRQLDREQQEVYRFTV 1036

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             ATD G     +  +V V +   N  +P F Q  Y  +V+E
Sbjct: 1037 VATDKGHIPKSSTADVIVYIDDINDHNPKFTQQAYIFSVNE 1077



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
            V+K  LD +      +   V AR++     SV V + + ++D+NDN P       ++   
Sbjct: 2482 VNKSGLDYESEK--NYLMGVEARDESANK-SVVVEVNITISDVNDNPPVFDPSEYVKEVY 2538

Query: 61   --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
              I  G     ++++ ATD D G N  + +SI  +S      FRI+ R+G I T  +L  
Sbjct: 2539 ENISIGTT---LLRVNATDKDSGANGRLVFSI--LSGNDKQSFRINSRTGEIVTIKRLDH 2593

Query: 118  -AGEQYSITVQATD 130
             + +++++++QA D
Sbjct: 2594 ESIKEHTLSIQAID 2607



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 10/183 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEA 66
           LDR+  +  +   Q  A +  G  +     + V + D+ND  P   P      I +  + 
Sbjct: 712 LDRETKDFHQLEVQ--ATDGGGLKSKNSAVIQVTVLDVNDEPPVFEPSSYKFAIDENSDV 769

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
              +  + A+  DLG NA+I YSI   S+  +H       +G I T   +      Q  +
Sbjct: 770 NTLLGSVYASSKDLGTNAQIYYSI---SDGNIHNVFTINSTGTIFTQNNIDHERSPQLLL 826

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           TVQA D G         VSV V   N  +P F+    DVN+ E   I      +T     
Sbjct: 827 TVQAKDGGSPPLYGFANVSVTVIDLNDNAPSFESGVIDVNILEDIKIGEVFYNVTAQDPD 886

Query: 184 SGC 186
           SG 
Sbjct: 887 SGL 889



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 9/142 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEA--RRQIVKIEA 75
            + F   A +K        V +TV++ D N++AP    IP    I +G +  + ++V++ A
Sbjct: 1872 YNFLCRATDKGVAPRETSVGVTVSIIDENNHAPVFDAIPYEATIVSGSSVPQNELVRVHA 1931

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGG 133
             D D   +  IT+  Y + N+    F+++  SGV+     +  I  + Y + + A D G 
Sbjct: 1932 EDKD---SKSITHMTYRLDNSSQPFFQLESNSGVMRVKQGVSSIPDKVYVLNIIADDGGN 1988

Query: 134  KSSQTIVEVSVVPGPNTRSPVF 155
             + + IVE+ +V   +   P+F
Sbjct: 1989 LTGRGIVEI-IVGSVSPNRPIF 2009



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 14/154 (9%)

Query: 45  DINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT---GLH 99
           D+NDN P        P   +  +    IV++ ATD D+G   ++ YS+ H S +   G  
Sbjct: 207 DVNDNDPVFNPKYYNPNVTENTKQFTPIVEVYATDKDIGTYGKVMYSVIHDSTSDPDGHF 266

Query: 100 KFRIDPRSGVIETTGKLIAGEQ--YSITVQATD--TGGKSSQTIVEVSV-VPGPNTRSPV 154
             R + + G+I    KL   +Q  YS+ V A +  +GG   + +  V++ +   N  SP 
Sbjct: 267 ALRTNEK-GIIVNLAKLDREKQDSYSLRVLAHNPGSGGYYKRDLAYVTINILDVNDNSPE 325

Query: 155 FQQNTY---DVNVSEGASINSTVATITVSRLASG 185
                Y      V E AS+ + VA + V+   +G
Sbjct: 326 VSYTFYLDDAYQVYEDASVGTKVARVWVTDKDAG 359



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 10/147 (6%)

Query: 45   DINDNAPRLPMIPP-IQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            D+ND+ P    IP  + +   E R       + A D D+G N  I Y I H +     KF
Sbjct: 1690 DVNDHRPVF--IPSRLNLTVLEHRPPFDFHTLRAQDPDIGQNGRIRYIIQHGNEDA--KF 1745

Query: 102  RIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSVVPG-PNTRSPVFQQN 158
             +   +GV+ TT +L      +Y + ++A +         + V++  G  N  SP F  +
Sbjct: 1746 SVGEFTGVLSTTAELDRERKSRYYLVIEARNVVVPFYNASIYVTIFVGDKNDNSPKFVNS 1805

Query: 159  TYDVNVSEGASINSTVATITVSRLASG 185
            +Y VN+ E   I + +     + + SG
Sbjct: 1806 SYSVNIRELTKIGTPILRAQANDIDSG 1832


>gi|301608227|ref|XP_002933692.1| PREDICTED: hypothetical protein LOC100494436, partial [Xenopus
           (Silurana) tropicalis]
          Length = 4551

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 10/162 (6%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLGVNAE 85
           K GTA     +L V + D+NDN+P     I  I ++    +  +V ++ A D D G NA 
Sbjct: 497 KTGTA-----TLRVMIQDVNDNSPAFSQDIYHINLEENAPKDFVVLQLNAIDKDDGSNAM 551

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           ITYS   ++   L  F IDP  G+I+T G+L     E Y +TV+A D GG +S   V V 
Sbjct: 552 ITYSFSQITKNVLQIFTIDPIKGIIKTIGELDFELTESYQMTVEAKDGGGLTSHCKVLVD 611

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ++   N  +P     +    +SE +   + +A I +  L SG
Sbjct: 612 II-DVNDNAPEIIITSVTSTISEDSPAGTVIALIKIHDLDSG 652



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 7/135 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V +  LDR+    G+ +  + A +      S    +T+++ D NDN P+   P+     
Sbjct: 1339 LVLEHTLDRE--EIGEHQLILTALDGGNPPRSGTTKITIHVLDNNDNPPKFDQPVYKTSL 1396

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++       ++K+ ATD D G+N+EI YS   H +      FR+D  SG I   G++   
Sbjct: 1397 LENIPLDTLLIKLNATDLDDGLNSEIEYSFDDHTARLVEKLFRLDSSSGEIHVQGEIDFE 1456

Query: 120  EQ--YSITVQATDTG 132
            E   Y I ++A D G
Sbjct: 1457 ESSFYEIHIRARDKG 1471



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 18/200 (9%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
            Y +V+  +LDR+     ++  Q++A +    A       T+N++DINDNAP         
Sbjct: 2994 YSLVTDRSLDRE--TISQYTIQIVAMDLGTPALQTQSIFTLNVSDINDNAPIFLQTHYEA 3051

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTGK 115
            +  +  E    +  + A D D GVNA++ YS+    +  + +  F  I+P++G +    +
Sbjct: 3052 LIKENNEPGSLLCTLGAFDLDDGVNAQLVYSLVDSQIDGSFVSSFVYINPQNGHL-YAQR 3110

Query: 116  LIAGEQ---YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG---- 167
                EQ     IT +  D G  K S  I     +   N  SPV     + V ++ G    
Sbjct: 3111 AFDYEQIQLLQITAKVEDCGVPKLSCNITVFIFILDTNDNSPVLLHPKHSVELNMGEKIQ 3170

Query: 168  --ASINSTVATITVSRLASG 185
              AS+   V  I+   L SG
Sbjct: 3171 RSASLGYLVTKISAVDLDSG 3190



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 16/161 (9%)

Query: 37   VSLTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
             SL + + DINDN+P       +I   +I+A    R  ++I A D D+GVN     S Y 
Sbjct: 3845 FSLEIEILDINDNSPSFSKDHHIITITEIRANPGVRFPLEI-AKDPDVGVNG---ISQYK 3900

Query: 93   VSNTGLHKFRIDPRSG-------VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV- 144
            +         +  R         V+E        +++ + + A D G  +     +++V 
Sbjct: 3901 IETNPYFSLSVKKRKDGTPIPELVLERALDREEKKEHRLILTAVDGGEPARSGSCQITVI 3960

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V   N   PVF Q++Y + + E + +N+ + T+  + L  G
Sbjct: 3961 VLDFNDNPPVFSQSSYRITLLENSKLNTLLITLNATDLDEG 4001



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 14/159 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            SL +++ DINDN+P    I  I    +I A    R  ++I A D D+G+N    Y +   
Sbjct: 2707 SLEIDILDINDNSPTFSNIDRIVKITEIFASPGTRFPLEI-AQDPDVGINGISQYKM--D 2763

Query: 94   SNTGLHKFRIDPRSG------VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
            SN       I+ + G      V+E +      +++ + + A D G  +     +++V V 
Sbjct: 2764 SNPYFSLSVINRKDGTLIPELVLERSLDREEKKEHKLILTALDGGEPAKSGSCQITVIVL 2823

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF ++TY V + E A I++ +  +  + L  G
Sbjct: 2824 DINDNPPVFDKSTYKVKLLENAIIDTVLTKLNATDLDEG 2862



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 17/127 (13%)

Query: 45   DINDNAPRL--PMIPPIQIQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNT 96
            D NDN P +  P++    I+  +  R +       KI A D D G NA +TY+I   ++ 
Sbjct: 1701 DQNDNHPTVLYPLLTRETIEHQKVPRHVSMGYLVTKITAVDADSGYNAWLTYTILQATDP 1760

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQY--SITVQATDTG--GKSSQTIVEVS---VVPGPN 149
             L  FRI P +G I     ++  ++   +I V   D G    SS   V VS   VVP   
Sbjct: 1761 SL--FRISPHTGEIRVMRHVLETDESTNTIFVLIRDNGEPALSSTATVIVSFEEVVPDET 1818

Query: 150  TRSPVFQ 156
             +S  FQ
Sbjct: 1819 PKSQDFQ 1825



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 15/169 (8%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATD 77
           +Q+    K G   +    + V++ D+NDNAP + +I  +     E   A   I  I+  D
Sbjct: 590 YQMTVEAKDGGGLTSHCKVLVDIIDVNDNAPEI-IITSVTSTISEDSPAGTVIALIKIHD 648

Query: 78  NDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            D G N ++T  I     +  ++T  + +++  ++ +   T       +Y+IT+ A+D G
Sbjct: 649 LDSGENGQVTCHINENMPFEFTSTSNNYYKLITKANMDRETNA-----EYNITITASDKG 703

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                T   +  ++   N  +PVF++  Y + V+E  S  +++  I  S
Sbjct: 704 LPQLSTNKTIPLIISDVNDNAPVFEKANYIIYVAENNSPGTSIYNIHAS 752



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 15/144 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----------IQIQAGEAR 67
           +F+FQV+A++      S  +++ + + D NDNAPR+    P          I   +G+  
Sbjct: 802 EFQFQVMAKDSGSPPLSQNITVKICIIDQNDNAPRILYPSPDTDSTALFEFIPRFSGKDY 861

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
             + KI A D D G NA ++Y +  V ++    F I   +G I        I   +  I 
Sbjct: 862 L-VTKIVAIDADSGHNAWLSYHLLQVPDSPY--FSIGQHTGEIRVIRDFDDIENLRQRIV 918

Query: 126 VQATDTGGKSSQTIVEVSVVPGPN 149
           V A D G  S    V +++V   N
Sbjct: 919 VLAKDNGTPSLSATVTLNLVVAEN 942



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 21/180 (11%)

Query: 18   KFR-FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQI 70
            KF    V+A++K          L V + DINDNAP + +      +P    +       +
Sbjct: 4043 KFHELSVLAKDKGFPELEGRCVLHVEVEDINDNAPEIILTSMSTSVP----ENATLDTAV 4098

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGE--QYSITV 126
                  D D G N E+   +    + G+  FRI P +    + T G L   +  +Y+I +
Sbjct: 4099 AFFTVRDRDSGKNGEVKLEV----SQGI-PFRIKPLNNHYSLVTDGILDREKISKYTIQL 4153

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ATD G  + QT   +++ V   N   PVF Q  Y+  + E     S +  ++   L  G
Sbjct: 4154 TATDLGFPALQTQTTITLHVSDINDNPPVFLQTHYEAFIKENNEPGSLLCAVSAFDLDEG 4213



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 23/159 (14%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            Y +V+   LDR+     K+  Q+ A +    A     ++T++++DINDN       PP+ 
Sbjct: 4133 YSLVTDGILDRE--KISKYTIQLTATDLGFPALQTQTTITLHVSDINDN-------PPVF 4183

Query: 61   IQA---------GEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLHKF-RIDPRSG 108
            +Q           E    +  + A D D GVNA + YSI   ++ ++ +  F  I+P++G
Sbjct: 4184 LQTHYEAFIKENNEPGSLLCAVSAFDLDEGVNAGLIYSITERNIDSSPVSSFVYINPQNG 4243

Query: 109  VI--ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV 145
             I  +        + + ITV+  D+G   S   V + V+
Sbjct: 4244 NIYAQRAFDFEYIQIFQITVKVEDSGKLFSSVDVSIFVL 4282



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPM 55
            +V +  LDR+     + R  + A +    A S    +TV + D NDN P       R+ +
Sbjct: 3923 LVLERALDRE--EKKEHRLILTAVDGGEPARSGSCQITVIVLDFNDNPPVFSQSSYRITL 3980

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTG 114
            +     +  +    ++ + ATD D G N+E+ Y +  H S+     F ++ ++G I   G
Sbjct: 3981 L-----ENSKLNTLLITLNATDLDEGKNSELEYYLDDHTSDFAKELFSLNSQTGDIFIKG 4035

Query: 115  KLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L+  E+   + ++V A D G    +    + V V   N  +P     +   +V E A++
Sbjct: 4036 -LVDFEESKFHELSVLAKDKGFPELEGRCVLHVEVEDINDNAPEIILTSMSTSVPENATL 4094

Query: 171  NSTVATITVSRLASG 185
            ++ VA  TV    SG
Sbjct: 4095 DTAVAFFTVRDRDSG 4109



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 12/191 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V + +LDR+     K    + A +    A S    +TV + DINDN P        +++
Sbjct: 2784 LVLERSLDREEKKEHKLI--LTALDGGEPAKSGSCQITVIVLDINDNPPVFDK-STYKVK 2840

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSG--VIETTGKL 116
              E       + K+ ATD D G N EI Y    H S++    F ++ ++G   I+     
Sbjct: 2841 LLENAIIDTVLTKLNATDLDEGTNGEIEYYFDDHTSDSAKELFHLNSQTGEIYIKRLVDF 2900

Query: 117  IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             A   Y ++++A D G      + +++V  +   N   P     +   ++ E  ++ + V
Sbjct: 2901 EASHFYELSIRAKDKGVPELEGRCLLQVE-IEDENDNPPEITLTSVSSDIPENTALETAV 2959

Query: 175  ATITVSRLASG 185
            A  TV    SG
Sbjct: 2960 AFFTVRDKDSG 2970


>gi|410972449|ref|XP_003992672.1| PREDICTED: protocadherin Fat 3 isoform 2 [Felis catus]
          Length = 4589

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAMDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTVSEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 10/145 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y    
Sbjct: 3014 TVEVTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKVRAKDADIGSNGDIRYSLY---G 3070

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            +G ++F +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   
Sbjct: 3071 SGNNEFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCQSDIHL-ILEDVNDNP 3128

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF    Y+  V E  +  + +  +
Sbjct: 3129 PVFSSEHYNACVYENTATKALLTRV 3153



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TTGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  +FRI+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYQIRSGNEQG--RFRINPKTGGISVSEVLDYELCKKFYLVVEAKDGGTPALSAVTT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            VS+ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VSINLTDVNDNPPRFSQDVYSAVISEDALVGDSV 3360



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G+I    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIIYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++ + +I
Sbjct: 2187 DKPFYTASINEDIRMDTPILSI 2208



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T V   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTAVVTILVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+ ++    
Sbjct: 1106 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPK 1163

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1164 DVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINTKTGLITTTSRKLDREQQAEHF 1221

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1222 LEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YNLIARATDGGGRFCQSDIHLILEDVNDNPPVFSSEHYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   +++    F ID  SG+I     L   +Q  Y+I+VQATD   G++
Sbjct: 3159 DVGINRKVVYSL---ADSADGFFSIDGSSGIIILEQPLDREQQPSYNISVQATDQSPGQA 3215

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            KF   V A++    A S   ++++NL D+NDN PR        + + +A     ++ + A
Sbjct: 3306 KFYLVVEAKDGGTPALSAVTTVSINLTDVNDNPPRFSQDVYSAVISEDALVGDSVILLIA 3365

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V+     +F ++P  G+++   KL    ++G  YS+ VQA D+
Sbjct: 3366 EDADSPPNGQIHFSI--VNGDRDDEFAVEPVLGLVKVKKKLDRERVSG--YSLLVQAVDS 3421

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3422 GIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 3471



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSVSMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            +R  V A +   G  A V V L VN  D+NDN P    P       +A      ++++ +
Sbjct: 2254 YRLTVRASDALTGARAEVTVDLLVN--DVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVS 2311

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG 132
            TD D G N  + Y I   +      F ID  SG+I  T +++  E     ++ V+ATD G
Sbjct: 2312 TDADSGNNKLVHYQIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCTLKVRATDNG 2370

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                SS+ +V +  +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2371 FPSLSSEVLVHI-YISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPAFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            ++   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IIYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGNIDGIFTINPYSGVI-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 1796



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+ + D ND+ P    P+      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 458 VTIGIEDANDHTPEFQQPLYDAFVNESVPMGTSVLMVSASDKDKGENGYITYSI---ASL 514

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            L  F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 515 NLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 574

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 575 SPLFEK 580



 Score = 42.4 bits (98), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVAAQDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLLPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFLQDSYSVNILESSSIGTEIIQV 853



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 2362 LKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2421

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 2422 DSSDFDRLEYSI--LSGNDRTSFLMDGKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2478

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2479 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +ITY+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQITYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLDVTNKEGDLKAQVTIG----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V  ++ S    G
Sbjct: 476 LYDAFVNESVPMGTSVLMVSASDKDKG 502


>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
          Length = 4589

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATRYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +G A+   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI   
Sbjct: 2606 GSGAAKGTSVIKVLASDADEGSNADVTYAIESDSESVKENLEINKLSGLITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAMDNGSPSRESVVPVYVKILPPEMQLPKFSEPFYTYTVSEDMPIGTEIDLI 2725



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI  +S     KF ID ++G +     L   +  +Y +TV
Sbjct: 3248 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTV 3305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  VS+ V   N  +PVF Q+TY   +SE A +  +V T+
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVISEDAVLEQSVITV 3357



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V+++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVDVSDTNDHAPWFTASSYKGRVYESAAIGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRNNQVEYDLMVKATDKGSPPMSEITSVHIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVEMSETVSIGSFVGMVTAHSQSS 1696



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YS
Sbjct: 1231 IIVKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPVYRVIATDRDEGPNAEISYS 1290

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV-- 145
            I   +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  
Sbjct: 1291 IEDGNEHG--RFFIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISK 1348

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P P+     F+++ +   V E   +   +  I+V
Sbjct: 1349 PKPSPEPMSFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+ 
Sbjct: 3031 TIPEDTLPG----KLIMQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y + V+ATD GG+  +  + V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQAVYHLLVRATDGGGRFCEASI-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSDDKLTYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  + V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCEASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G   +
Sbjct: 3153 DAGLNRKISYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDHGLPRR 3209

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + T   V  V   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTTTGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++++N+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ + A D D  +N+ I YSI    N G   F IDP  G ++ T  L    I+G 
Sbjct: 3349 VLEQSVITVMADDADGPLNSHIHYSIID-GNRG-SSFTIDPVRGDVKVTKVLDRETISG- 3405

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA+D G         V++ V   N  +P F +  Y V + E   +  +V  + V
Sbjct: 3406 -YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSRGNYSVIIQENKPVGFSVLQLVV 3464

Query: 180  S 180
            +
Sbjct: 3465 T 3465



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L      Q++I V+A D G    SS+
Sbjct: 2314 PNRGISYQMFGNLSKSQDHFHIDSSTGLISLLRTLDYERSRQHTILVRAVDGGMPPLSSE 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2374 VIVTVDVT-DLNDNLPLFEQQIYEARISEHA 2403



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 15/151 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN P+   IPP  +++  E   +   I+ +EA D DLG + ++ YS+  
Sbjct: 911  VVLKVSLEDVNDNPPKF--IPPNYRVKVREDLPEGTVIMWLEAYDPDLGQSGQVRYSLV- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG----KSSQTIVEVSVVP 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G      S+  +    V  
Sbjct: 968  --DHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVKAKDKGKPVSLSSTCYVEVEVVDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF        V EGA + S V T+
Sbjct: 1026 NENLHPPVFSSFVEKGAVKEGAPVGSLVMTV 1056



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 20/151 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN      +P  + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDN------LPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSDVGKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G++  +   +      YS+ +  +D   +SS   V V+V+ 
Sbjct: 2428 SI--LSGNDHKHFVIDGATGIVTLSNLRRHTLKPFYSLNMSVSDGVFRSSAQ-VHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G N  SP F QN Y+V ++E A++++ V  +
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAALHTLVTEV 2514



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRI   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVAAQDEDAGRDGEIRYSIRDGSGVGV--FRIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++  D D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VTEVKTVDGDSGIYGRVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+  GA+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATRYEVNIGSGAAKGTSVIKVLASDADEG 2626



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T + +  E    Y++ +Q T+  G S+ T V V +    N  SPVF Q
Sbjct: 1710 FDINPHSGSI-ITQRALDFETLPIYTLIIQGTNMAGLSANTTVVVHL-QDENDNSPVFVQ 1767

Query: 158  NTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
              Y   +SE AS+NS V T     L  G A  +K+ N+
Sbjct: 1768 AEYTGLISESASVNSVVLTDRNVPLVIGAADADKDSNA 1805



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I++I ATD D     ++ Y++   ++   L KFR+DP +G + T+ KL   A  Q+ +T
Sbjct: 1474 EILQISATDQD--EKNKLIYTLQSSTDPLSLKKFRLDPATGSLYTSEKLDHEAIHQHVLT 1531

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      +    + V V   N  +P F  ++Y   V E A+I S V  +T
Sbjct: 1532 VMVRDQDVPVKRNFARIVVDVSDTNDHAPWFTASSYKGRVYESAAIGSVVLQVT 1585



 Score = 42.4 bits (98), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +  +F  QV         A    ++T+++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFQFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFARPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D R G +          +Y +T
Sbjct: 1894 RGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYRMGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 IRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 29/173 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            F   V   E+Q  +A   V + V + D NDNAP    LP    +++ A E    I  + A
Sbjct: 2047 FDVVVEVTEEQKPSAVAHVVVKVIVEDQNDNAPVFVNLPYYAVVKVDA-EVGHIIRYVTA 2105

Query: 76   TDNDLGVNAEITYSI--YHVSNTGLHKFRIDPRSGV-------IETTGKLIAGEQYSITV 126
             D D G N E+ Y +  +H        F+I P   +       ++T  K     +Y +TV
Sbjct: 2106 VDRDSGKNGEVHYYLKEHH------EHFQIGPLGEISLKKPFELDTLNK-----EYLVTV 2154

Query: 127  QATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G    S++ IV ++V+   N   PVF++  Y   + E   ++S V  +
Sbjct: 2155 VAKDGGNPAFSAEVIVPITVM---NKAMPVFEKPFYSAEIPENIQVHSPVVHV 2204



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 12/171 (7%)

Query: 20   RFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIE 74
            +F ++AR   E     +SV VS+ V   D NDN+P     P     ++   A  ++++I 
Sbjct: 2775 QFSILARCTEEDYEMVSSVEVSIQVK--DANDNSPVFESSPYEAFIVENLPAGSRVIQIR 2832

Query: 75   ATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            A+D D G N ++ Y +    +T  +  F +   +G I T  +L   ++  Y I V A+D 
Sbjct: 2833 ASDVDSGANGQVVYRLDQSQSTEVIESFAVHTETGWITTLKELDHEKRGNYQIKVVASDH 2892

Query: 132  GGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G K   S T      V   N   P F    Y   VSE       VA ++ +
Sbjct: 2893 GEKIQLSSTTTVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVVAILSTT 2943



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  + ++ ATD D+G N E  YS    ++     F I P SGV+  TG+L  +    Y +
Sbjct: 165 RTSVARVSATDADIGTNGEFYYSFKDRTDM----FAIHPSSGVVVLTGRLDFLETRLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYS+  +++
Sbjct: 808 LDVVVIDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGRVTYSV--LTD 864

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ---TIVEVSVVPGPNT 150
           T +  F ID  +GV++    L    Q  + + ++A D   +  Q   T+V    +   N 
Sbjct: 865 TDM--FSIDSTAGVVKILQPLDREVQPVHYLKIEARDQAREEPQLFSTVVLKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPKFIPPNYRVKVRE 938



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E +     ++ + ATD D G N ++ Y++   +      
Sbjct: 707 HSVNAHAPQFRSALPTGIRVKENQPVGSSVILMNATDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  +++V V+   N   P F 
Sbjct: 765 FIIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVIDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   ++S +  +
Sbjct: 824 QESYFVEVSEDKEVHSEIIQV 844


>gi|328701666|ref|XP_003241675.1| PREDICTED: protein dachsous-like [Acyrthosiphon pisum]
          Length = 3383

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 23/194 (11%)

Query: 2    LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLT-VNLNDINDNAPRLPMIP-- 57
            ++ + ENLDR+  PN   +  QV+AR+          +L  V + D+NDN P     P  
Sbjct: 1880 IITTVENLDRERQPN---YWLQVVARDGGKYNPRSSTTLVYVKVLDVNDNVPVFTKYPFT 1936

Query: 58   ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
               P  +Q G     IV++   D D G NA++ YS +  +    ++FRI+P +GV+  + 
Sbjct: 1937 AEIPSHVQPG---MDIVRVSTVDKDEGSNADVLYS-FKENQEATNRFRINPNTGVVTASS 1992

Query: 115  KLIA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPN-TRSPV--FQQNTYDVNVSEG 167
             L A  G+ + + V ATD G   +SS  ++E+ +  G N  R PV  F+ +TY V + E 
Sbjct: 1993 SLAADNGQVFHLEVTATDKGNPPQSSSGLLEIKI--GDNFDRIPVMRFKNSTYHVTIPEN 2050

Query: 168  ASINSTVATITVSR 181
               +  V  I+  R
Sbjct: 2051 LEQHKEVLEISAYR 2064



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 19/189 (10%)

Query: 5    SKENLDRDPPNPGKFRFQVI--AREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +KE LDR+     +   +VI  AR++ G     S  V + V + D+NDNAP +  + P Q
Sbjct: 1136 TKEPLDRE----SRVWHEVIVEARDQDGGVRGRSKRVKVKVAVTDVNDNAPVI--VDPQQ 1189

Query: 61   IQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTG 114
                   +Q     +V ++ATD D G NA +TYSI    ++ G  +F ID  +GVI T  
Sbjct: 1190 DVVAVREQQPPGVEVVTVKATDPDQGNNATLTYSILKGRDSDGNGEFFIDRITGVIRTKV 1249

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
             L   E+  Y ++V ATD G    QTI  + V V   N   P F  ++    V E A + 
Sbjct: 1250 SLDHEEKSMYRLSVAATDNGHPPKQTIRMLRVEVLDLNDNRPTFTSSSLVFQVKEDAVVG 1309

Query: 172  STVATITVS 180
            S    I  S
Sbjct: 1310 SIAGRIACS 1318



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 14/161 (8%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQI 61
            ++ + LDR+  +  K++ Q IA + +G+  +   +LTV ++D NDN P         + +
Sbjct: 1779 LTAKTLDREVQS--KYQLQ-IAGQNRGSTTAGHCNLTVLVDDENDNDPNFEQSKYEAVLL 1835

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +      +++  +A D D+GVNA+ITYS+   SN   + F+ID ++G+I T   L    Q
Sbjct: 1836 EDVPPGTKVLTAKAHDADVGVNAKITYSL---SNQTENVFQIDNKTGIITTVENLDRERQ 1892

Query: 122  --YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQ 157
              Y + V A D G    +SS T+V V V+   N   PVF +
Sbjct: 1893 PNYWLQVVARDGGKYNPRSSTTLVYVKVL-DVNDNVPVFTK 1932



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 15/197 (7%)

Query: 1   YLVVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIP 57
           YLV+    LDR+  PN   +   VIA +          +  + + D+NDN P    P   
Sbjct: 395 YLVIVALPLDRESRPN---YTLSVIATDAGSPPLHASKTFHLLVTDVNDNRPVFAAPEYW 451

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
               +  E    + ++ ATD D G NA +TY +    +     F++DP +GV+ T  ++ 
Sbjct: 452 ASVSETAEPGTSVARVLATDEDEGDNAALTYKM---RDPPPLWFQVDPLTGVVATRDRMD 508

Query: 118 AGE--QYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                + +  V A D G     +  T V V++    N   P+F Q+ Y+V+VSE  ++ S
Sbjct: 509 CERDPEPTFVVLAIDNGRPQQLTGTTTVHVTI-HDLNDNEPIFDQSFYNVDVSEDRAVGS 567

Query: 173 TVATITVSRLASGCAIM 189
            V  ++ S    G   M
Sbjct: 568 CVLKVSASDPDCGVNSM 584



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            LV  +  +DR+     ++   V A ++  ++  V VSL VN+ D+ND++PR        +
Sbjct: 1674 LVTLQNRIDRE--RTSRYVLPVYATDEVKSSTDV-VSLEVNVLDVNDHSPRFKHDSCHTL 1730

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +   +    I  + A D D G + ++ YSI  +   G +KF +DP++G  E T K +  
Sbjct: 1731 MVPENQEPSVIRTVSAIDPDWGSHGQVVYSI--IGGNGGNKFHLDPKTG--ELTAKTLDR 1786

Query: 120  E---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            E   +Y + +   + G  ++       +V   N   P F+Q+ Y+
Sbjct: 1787 EVQSKYQLQIAGQNRGSTTAGHCNLTVLVDDENDNDPNFEQSKYE 1831



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            VIAR+    + S  ++L V++ DINDN P    P      +++     QIV++ A D D 
Sbjct: 943  VIARDSGVPSLSDNMTLVVDVQDINDNPPVFERPHYAATVLESLAVNSQIVQVTALDGDS 1002

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSS 136
            G NA +TY I   S  G     + P +G +     L    Q  Y +TV A D G  G  +
Sbjct: 1003 GNNARVTYRI--SSGDGGGSLDVHPGTGWVYVKSPLDRETQDTYELTVVAADNGSPGPLA 1060

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             T+V V  V   N   P F Q  Y+ +V E     +    ++ +   +G
Sbjct: 1061 ATVVVVVTVADVNDNDPEFDQEHYEFHVEENRPAGTAFGAVSATDRDAG 1109



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 12/132 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-- 93
            L + L D+NDN PR P+   ++   GE       +   +ATD D G+  ++ YSI     
Sbjct: 2656 LKIRLEDVNDNTPRFPVSEYLEF-VGENEPIGALVFTAKATDADRGLYGQLNYSIASSAS 2714

Query: 94   ---SNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
               ++     F+ID  SG++   T     A  +Y+ T+ A+D G K+++  V++  + G 
Sbjct: 2715 YSGADDSWKMFKIDALSGLVTTNTVFDYEARSKYTFTIIASDAGDKNTKVRVKIE-IEGK 2773

Query: 149  NTRSPVFQQNTY 160
            +  +P F + T+
Sbjct: 2774 DEFAPQFIERTF 2785



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 24/196 (12%)

Query: 2   LVVSKENLD--RDPPNPGKFRFQVIA----REKQGTAASVPVSLTVNLNDINDNAPRLPM 55
           +V +++ +D  RDP    +  F V+A    R +Q T  +   ++ V ++D+NDN P    
Sbjct: 500 VVATRDRMDCERDP----EPTFVVLAIDNGRPQQLTGTT---TVHVTIHDLNDNEPIFDQ 552

Query: 56  IPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                +   E R     ++K+ A+D D GVN+ + +++   S      F I   +G I  
Sbjct: 553 -SFYNVDVSEDRAVGSCVLKVSASDPDCGVNSMVNFTLSESSG----PFSIKSATGEICL 607

Query: 113 TGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +L    +  Y   V ATD GG S+  +V+V  V   N   PVF  + Y+V++    + 
Sbjct: 608 AKQLDYETRRLYEFPVVATDRGGLSTSAVVKVD-VQDVNDNWPVFSPSEYNVSIVWSPTE 666

Query: 171 NSTVATITVSRLASGC 186
              + T+      SG 
Sbjct: 667 QGPIVTVRAKDADSGS 682



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 20/153 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQA-GEAR--RQIVKIEATDNDLGVNAEITYSIYHV 93
            V+  V + D+NDN PR+      ++ A G AR    +  + A D D G N    Y+I   
Sbjct: 1502 VTARVVVQDVNDNGPRIVSPTFRRMYADGSARPGDWLCDVVAVDLDAGDNGRTVYTITGG 1561

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI------AGEQYSITVQATDTG--GKSSQTIVEVSVV 145
            +  G      D        TG LI       G ++S+ V   D G   + + T +EV+  
Sbjct: 1562 NEQGTFSIGYD--------TGALILARVPDTGRKHSLNVTVADRGTPARYAYTTLEVAFT 1613

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                 +S  F Q  Y  NVSE A + S VA +T
Sbjct: 1614 TSAE-QSVQFAQKLYTANVSEDALVGSFVAKVT 1645



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)

Query: 43   LNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + D NDN+P        +  P  +  G     I    ATD D G N ++ Y +   S   
Sbjct: 857  IEDKNDNSPHFDSSSVRIAVPENVATGSP---IYTAHATDPDSGANGQVHYELI-ASTQE 912

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQY------SITVQATDTGGKS-SQTIVEVSVVPGPNT 150
               F++D   G I     LI G  Y      ++TV A D+G  S S  +  V  V   N 
Sbjct: 913  PSYFQVDHNRGTI----SLIHGLDYETVHRLTVTVIARDSGVPSLSDNMTLVVDVQDIND 968

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              PVF++  Y   V E  ++NS +  +T     SG
Sbjct: 969  NPPVFERPHYAATVLESLAVNSQIVQVTALDGDSG 1003



 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 8/146 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG-EARRQIVKIEATD 77
            ++  VIA ++     +   ++ V + DINDN P  P    I ++ G E    I  + A  
Sbjct: 2220 YKLTVIATDEGTPQMTGMATIRVIVIDINDNRPSFPPRAAINVKEGLEVGSMITTVVA-- 2277

Query: 78   NDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            ND+     +TYS    V       F +D  SG +   G L   +   Y +TV  +D+   
Sbjct: 2278 NDVDTFPTLTYSWAPSVGPVDRKLFALDRYSGRVSLIGSLDYEQTRTYRLTVVVSDSEHT 2337

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTY 160
            +S  +    VV   N  SPVF +  Y
Sbjct: 2338 ASTEL--TVVVTDDNDNSPVFDRPYY 2361


>gi|301770721|ref|XP_002920779.1| PREDICTED: protocadherin Fat 3-like [Ailuropoda melanoleuca]
          Length = 4557

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAVDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTVSEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +  +   + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 3017 VTVSDVNDNSPVCEQVAYTALFPEDISSNKIILKVSAKDADIGSNGDIRYSLY---GSGN 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3074 DEFFLDPESGELKTLA-LLDRERVPMYSLIARATDGGGRFCQSDIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNACVYENTATKALLTRV 3153



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            E LD +  +  K    V+ R+++         + VN+ D ND++P    P+      ++ 
Sbjct: 1522 ERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESA 1579

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQY 122
                 I+++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  +    Q+
Sbjct: 1580 ALGSAILQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITLSKEPDMTTTGQF 1637

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V  I+
Sbjct: 1638 VLSVRVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVILIS 1694



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  +FRI+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--RFRINPKTGGISVSEVLDYELCKKFFLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +S+ V   N   P F Q+TY   +SE A +  +V
Sbjct: 3327 ISINVTDVNDNPPRFSQDTYSAVISEDALVGDSV 3360



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    +     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----ILQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +TV A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +++ + +I
Sbjct: 2187 DKPFYTASVNEDIRMDTPILSI 2208



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDRAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+ ++    
Sbjct: 1106 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPK 1163

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1164 DVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINTKTGLITTTSRKLDREQQAEHF 1221

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1222 LEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++YS++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYSVHSSIDSASMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPGTGVLYTVERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S +  +T
Sbjct: 1569 PLYEASVFESAALGSAILQVT 1589



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            KF   V A++    A S   ++++N+ D+NDN PR        + + +A     ++ + A
Sbjct: 3306 KFFLVVEAKDGGTPALSAVATISINVTDVNDNPPRFSQDTYSAVISEDALVGDSVILLVA 3365

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V+    ++F ++P  G+++   KL    ++G  YS+ VQA D+
Sbjct: 3366 EDADSQPNGQIRFSI--VNGDRDNEFAVEPVLGLVKVKKKLDRERVSG--YSLLVQAVDS 3421

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3422 GIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 3471



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +  + +D  GK   T +   +V         F Q+ Y  ++SE
Sbjct: 1952 MLIAKVSD--GKFYSTSMVTILVKEAMDSGLHFTQSFYSTSISE 1993



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + + + D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVMDLNDNKPVFETSSYETIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 7/135 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
            +V   + LDR+       + +   R + G      V+L V L+D+ND +P  +P    ++
Sbjct: 885  IVYVADQLDRESKANYSLKIEARDRAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVK 944

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            + +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L   
Sbjct: 945  VLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELDYE 1001

Query: 120  EQ--YSITVQATDTG 132
            +Q  Y++TV+A D G
Sbjct: 1002 KQQFYNLTVRAKDKG 1016



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDMLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKLVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI-TVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E  Q+ I  V+ATD G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCILKVRATDNGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV + D ND+ P    P+      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 458 VTVGIEDANDHTPEFQQPLYDAFVNESVPVGTSVLMVSASDKDKGENGYITYSI---ASL 514

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            L  F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 515 NLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 574

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 575 SPLFEK 580



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F I+P SGVI TT K +  E+   Y + VQAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGNIDGIFTINPYSGVI-TTRKALDYERTSSYQLIVQATNMAGMASNVTVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLIARATDGGGRFCQSDIHLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   +N G           ++E          Y+I+VQATD   G++  
Sbjct: 3159 DVGINRKVVYSLADSAN-GFFSIDSSSGIIILEQPLDREQQPSYNISVQATDQSPGQALS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D+D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVAAQDDDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLLPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFLQDSYSVNILESSSIGTEIIQV 853



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E     Y+     +  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGE----FYYYFKNKVDLFS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 2362 LKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2421

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 2422 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2478

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E  +  + V
Sbjct: 2479 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENTAAGTKV 2515



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYTI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  I  E Y + V   +   K+  T+     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTIKKEVYKLGVTNKEGDLKAQVTVG----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V  ++ S    G
Sbjct: 476 LYDAFVNESVPVGTSVLMVSASDKDKG 502


>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
          Length = 4495

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 23/200 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GAS 169
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E    G  
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFENTEPGTL 3143

Query: 170  INSTVATITVSRLASGCAIM 189
            +    AT   + ++ GC+ +
Sbjct: 3144 LTRVQATDADAGISRGCSCL 3163



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 21/175 (12%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVN---------AEITYSIYH----VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
            D G++          EI  + +     + N G +    D  SG +     L   +  +Y 
Sbjct: 3153 DAGISRGCSCLTLLTEILGASWENVVALQNAGSN---FDFYSGAVFIIENLDYESSHEYY 3209

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +TV+ATD G  S   +  V++ V   N  +PVF Q+TY   +SE A +  +V T+
Sbjct: 3210 LTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTYTTVISEDAVLEQSVITV 3264



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   S+ +N+ DINDN P         + + +A
Sbjct: 3198 ENLDYESSH--EYYLTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTYTTVISEDA 3255

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T  L    I+G 
Sbjct: 3256 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVTRLLDRETISG- 3312

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V
Sbjct: 3313 -YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVV 3371

Query: 180  S 180
            +
Sbjct: 3372 T 3372



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFENHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2374 VIVTVDVT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2428 SI--LSGNDHKHFVIDSATGIITLSNLRRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 15/188 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEA 66
            +LDR+  +    + +   + ++    S  V + V+L D+NDN P    IPP  +++  E 
Sbjct: 882  SLDRELQHEHYLKIEARDQAREEPQLSSTVVVKVSLEDVNDNPPTF--IPPNYRVKVRED 939

Query: 67   RRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
              +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  
Sbjct: 940  LPEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQV 996

Query: 122  YSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y++TV+A D G      S+  +    V    N   PVF        V E A + S V T+
Sbjct: 997  YNLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTV 1056

Query: 178  TVSRLASG 185
            +     +G
Sbjct: 1057 SAHDEDAG 1064



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 17/138 (12%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVTVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK----SSQTIVEVSVVPGP 148
           T    F ID  +GV++    L   +  E Y + ++A D   +    SS  +V+VS +   
Sbjct: 867 T----FSIDSVTGVVKIARSLDRELQHEHY-LKIEARDQAREEPQLSSTVVVKVS-LEDV 920

Query: 149 NTRSPVFQQNTYDVNVSE 166
           N   P F    Y V V E
Sbjct: 921 NDNPPTFIPPNYRVKVRE 938



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+GKL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSGKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204



 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 8/128 (6%)

Query: 52  RLPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
           R  ++  IQ++  +     ++ + +TD D G N ++ Y+I   +      F ID  +G++
Sbjct: 717 RSTLLTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSC--FMIDMETGML 774

Query: 111 ETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +    L     ++Y++ +   D G   K++  ++ V+VV   N   P F Q +Y V VSE
Sbjct: 775 KILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVTVVDA-NDNPPEFLQESYFVEVSE 833

Query: 167 GASINSTV 174
              ++S +
Sbjct: 834 DKEVHSEI 841


>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 57   -PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TTPEDVLPG---KLILQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDREMISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2374 MIVTVDVT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSI 90
            +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ YSI
Sbjct: 2376 VTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429

Query: 91   YHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
              +S      F ID  +G+I  +   +      Y + +  +D G   S T V V+V+ G 
Sbjct: 2430 --LSGNDHKHFVIDSATGIITLSNLRRHALKPFYGLNLSVSD-GVFRSSTQVHVTVIGG- 2485

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2486 NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I +T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-STQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
           T    F ID  +GV+     L   +  E Y + ++A D   +  Q    V V   +   N
Sbjct: 867 T----FSIDSVTGVVRIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVVVKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ +  TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204


>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 57   -PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TTPEDVLPG---KLILQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDREMISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P F+Q  Y+  +SE A
Sbjct: 2374 MIVTVDVT-DLNDNPPFFEQQIYEARISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSI 90
            +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ YSI
Sbjct: 2376 VTVDVTDLNDNPPFF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429

Query: 91   YHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
              +S      F ID  +G+I  +   +      Y + +  +D G   S T V V+V+ G 
Sbjct: 2430 --LSGNDHKHFVIDSATGIITLSNLRRHALKPFYGLNLSVSD-GVFRSSTQVHVTVIGG- 2485

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2486 NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I +T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-STQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
           T    F ID  +GV+     L   +  E Y + ++A D   +  Q    V V   +   N
Sbjct: 867 T----FSIDSVTGVVRIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVVVKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ +  TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204


>gi|410972447|ref|XP_003992671.1| PREDICTED: protocadherin Fat 3 isoform 1 [Felis catus]
          Length = 4557

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAMDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTVSEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 10/145 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y    
Sbjct: 3014 TVEVTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKVRAKDADIGSNGDIRYSLY---G 3070

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            +G ++F +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   
Sbjct: 3071 SGNNEFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCQSDIHL-ILEDVNDNP 3128

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF    Y+  V E  +  + +  +
Sbjct: 3129 PVFSSEHYNACVYENTATKALLTRV 3153



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TTGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  +FRI+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYQIRSGNEQG--RFRINPKTGGISVSEVLDYELCKKFYLVVEAKDGGTPALSAVTT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            VS+ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VSINLTDVNDNPPRFSQDVYSAVISEDALVGDSV 3360



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G+I    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIIYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++ + +I
Sbjct: 2187 DKPFYTASINEDIRMDTPILSI 2208



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             + V+ +D  GK   T V   +V         F Q+ Y  ++SE
Sbjct: 1952 MLIVKVSD--GKFYSTAVVTILVKEAMDSGLHFTQSFYSTSISE 1993



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+ ++    
Sbjct: 1106 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPK 1163

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1164 DVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINTKTGLITTTSRKLDREQQAEHF 1221

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1222 LEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YNLIARATDGGGRFCQSDIHLILEDVNDNPPVFSSEHYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   +++    F ID  SG+I     L   +Q  Y+I+VQATD   G++
Sbjct: 3159 DVGINRKVVYSL---ADSADGFFSIDGSSGIIILEQPLDREQQPSYNISVQATDQSPGQA 3215

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            KF   V A++    A S   ++++NL D+NDN PR        + + +A     ++ + A
Sbjct: 3306 KFYLVVEAKDGGTPALSAVTTVSINLTDVNDNPPRFSQDVYSAVISEDALVGDSVILLIA 3365

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V+     +F ++P  G+++   KL    ++G  YS+ VQA D+
Sbjct: 3366 EDADSPPNGQIHFSI--VNGDRDDEFAVEPVLGLVKVKKKLDRERVSG--YSLLVQAVDS 3421

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3422 GIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 3471



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSVSMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            +R  V A +   G  A V V L VN  D+NDN P    P       +A      ++++ +
Sbjct: 2254 YRLTVRASDALTGARAEVTVDLLVN--DVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVS 2311

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG 132
            TD D G N  + Y I   +      F ID  SG+I  T +++  E     ++ V+ATD G
Sbjct: 2312 TDADSGNNKLVHYQIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCTLKVRATDNG 2370

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                SS+ +V +  +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2371 FPSLSSEVLVHI-YISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPAFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            ++   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IIYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGNIDGIFTINPYSGVI-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+ + D ND+ P    P+      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 458 VTIGIEDANDHTPEFQQPLYDAFVNESVPMGTSVLMVSASDKDKGENGYITYSI---ASL 514

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            L  F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 515 NLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 574

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 575 SPLFEK 580



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVAAQDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLLPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFLQDSYSVNILESSSIGTEIIQV 853



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 2362 LKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2421

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 2422 DSSDFDRLEYSI--LSGNDRTSFLMDGKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2478

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2479 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +ITY+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQITYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLDVTNKEGDLKAQVTIG----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V  ++ S    G
Sbjct: 476 LYDAFVNESVPMGTSVLMVSASDKDKG 502


>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 57   -PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TTPEDVLPG---KLILQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDREMISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2374 MIVTVDVT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSI 90
            +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ YSI
Sbjct: 2376 VTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429

Query: 91   YHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
              +S      F ID  +G+I  +   +      Y + +  +D G   S T V V+V+ G 
Sbjct: 2430 --LSGNDHKHFVIDSATGIITLSNLRRHALKPFYGLNLSVSD-GVFRSSTQVHVTVIGG- 2485

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2486 NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I +T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-STQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
           T    F ID  +GV+     L   +  E Y + ++A D   +  Q    V V   +   N
Sbjct: 867 T----FSIDSVTGVVRIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVVVKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ +  TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204


>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
 gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 57   -PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TTPEDVLPG---KLILQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDREMISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2374 MIVTVDVT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSI 90
            +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ YSI
Sbjct: 2376 VTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429

Query: 91   YHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
              +S      F ID  +G+I  +   +      Y + +  +D G   S T V V+V+ G 
Sbjct: 2430 --LSGNDHKHFVIDSATGIITLSNLRRHALKPFYGLNLSVSD-GVFRSSTQVHVTVIGG- 2485

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2486 NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I +T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-STQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
           T    F ID  +GV+     L   +  E Y + ++A D   +  Q    V V   +   N
Sbjct: 867 T----FSIDSVTGVVRIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVVVKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ +  TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    +  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVVRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204


>gi|281337853|gb|EFB13437.1| hypothetical protein PANDA_009560 [Ailuropoda melanoleuca]
          Length = 3367

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1330 VITTERLDRE--NPLEGDISIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1387

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1388 RADVGRGHLVTQVQAVDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 1447

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 1448 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTVSEDTAIGSTVD 1506

Query: 176  TITV 179
            T+ +
Sbjct: 1507 TLRI 1510



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +  +   + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 1795 VTVSDVNDNSPVCEQVAYTALFPEDISSNKIILKVSAKDADIGSNGDIRYSLY---GSGN 1851

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 1852 DEFFLDPESGELKTLA-LLDRERVPMYSLIARATDGGGRFCQSDIHL-ILEDVNDNPPVF 1909

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 1910 SSDHYNACVYENTATKALLTRV 1931



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 15/157 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 1991 GQALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 2046

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  +FRI+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 2047 AEITYLIRSGNEQG--RFRINPKTGGISVSEVLDYELCKKFFLVVEAKDGGTPALSAVAT 2104

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +S+ V   N   P F Q+TY   +SE A +  +V  +
Sbjct: 2105 ISINVTDVNDNPPRFSQDTYSAVISEDALVGDSVILV 2141



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
           E LD +  +  K    V+ R+++         + VN+ D ND++P    P+      ++ 
Sbjct: 300 ERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESA 357

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQY 122
                I+++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  +    Q+
Sbjct: 358 ALGSAILQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITLSKEPDMTTTGQF 415

Query: 123 SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V  I+
Sbjct: 416 VLSVRVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVILIS 472



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42  NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    +     
Sbjct: 851 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----ILQDDY 905

Query: 99  HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             F I+P SG +   E     ++  +Y +TV A D G  S  T VE+ +    N   PVF
Sbjct: 906 GHFEINPNSGNVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSVELPITI-VNKAMPVF 964

Query: 156 QQNTYDVNVSEGASINSTVATI 177
            +  Y  +V+E   +++ + +I
Sbjct: 965 DKPFYTASVNEDIRMDTPILSI 986



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 16  IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 74

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
             ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 75  DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 132

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F +  Y+  V E   +   V  ++V
Sbjct: 133 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 164



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            KF   V A++    A S   ++++N+ D+NDN PR        + + +A     ++ + A
Sbjct: 2084 KFFLVVEAKDGGTPALSAVATISINVTDVNDNPPRFSQDTYSAVISEDALVGDSVILVVA 2143

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V+    ++F ++P  G+++   KL    ++G  YS+ VQA D+
Sbjct: 2144 EDADSQPNGQIRFSI--VNGDRDNEFAVEPVLGLVKVKKKLDRERVSG--YSLLVQAVDS 2199

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 2200 GIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 2249



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++YS++  + +  + K
Sbjct: 230 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYSVHSSIDSASMRK 286

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 287 FRIDPGTGVLYTVERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 346

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S +  +T
Sbjct: 347 PLYEASVFESAALGSAILQVT 367



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
           NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 616 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 672

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                 +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 673 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 729

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +  + +D  GK   T +   +V         F Q+ Y  ++SE
Sbjct: 730 MLIAKVSD--GKFYSTSMVTILVKEAMDSGLHFTQSFYSTSISE 771



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + + + D+NDN P         I ++     
Sbjct: 1557 FHFKV--------AATIPLDKVDIVFTVDVDIKVMDLNDNKPVFETSSYETIIMEGMPVG 1608

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 1609 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 1668

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 1669 FSVVASDLGEAFSLSSTALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 1725



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 1043 TGARAEVTVDMLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKLVHY 1102

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI-TVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E  Q+ I  V+ATD G    SS+ +V + 
Sbjct: 1103 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCILKVRATDNGFPSLSSEVLVHI- 1160

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1161 YISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1197



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90  IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           IY V +  +   F I+P SGVI TT K +  E+   Y + VQAT+  G +S   V + +V
Sbjct: 480 IYEVKDGNIDGIFTINPYSGVI-TTRKALDYERTSSYQLIVQATNMAGMASNVTVNIQIV 538

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 539 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 574



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 1877 YSLIARATDGGGRFCQSDIHLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 1936

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   +N G           ++E          Y+I+VQATD   G++  
Sbjct: 1937 DVGINRKVVYSLADSAN-GFFSIDSSSGIIILEQPLDREQQPSYNISVQATDQSPGQALS 1995

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 1996 SLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 2036



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 1140 LKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 1199

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 1200 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 1256

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E  +  + V
Sbjct: 1257 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENTAAGTKV 1293



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 1289 AGTKVIHVRATDGDPGTYGQISYTI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 1345

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1346 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1387


>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
          Length = 4588

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 57   -PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TTPEDVLPG---KLILQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDREMISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P F+Q  Y+  +SE A
Sbjct: 2374 MIVTVDVT-DLNDNPPFFEQQIYEARISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSI 90
            +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ YSI
Sbjct: 2376 VTVDVTDLNDNPPFF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429

Query: 91   YHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
              +S      F ID  +G+I  +   +      Y + +  +D G   S T V V+V+ G 
Sbjct: 2430 --LSGNDHKHFVIDSATGIITLSNLRRHALKPFYGLNLSVSD-GVFRSSTQVHVTVIGG- 2485

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2486 NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I +T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-STQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
           T    F ID  +GV+     L   +  E Y + ++A D   +  Q    V V   +   N
Sbjct: 867 T----FSIDSVTGVVRIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVVVKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPTFIPPNYRVKVRE 938



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGEQY 122
             +   I+ +EA D DLG + ++ YS+    + G   F  D  P +G I         + Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDXDKLPXAGRIVQPLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ +  TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    +  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVVRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204


>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
          Length = 4588

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 57   -PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3031 TTPEDVLPG---KLILQVSATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYAITVFE 3136



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAE++YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNGRREPLYRVIATDKDEGPNAEVSYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+       AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSCKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN+P            +A      +V++ ATD+D   N  I+Y
Sbjct: 2261 TGAHAEVFVDIIVEDINDNSPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISY 2320

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSV 144
             ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V V
Sbjct: 2321 QMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDV 2380

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
                N   P+F+Q  Y+  +SE A
Sbjct: 2381 T-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      Y + +  +D G   S T V V+V+ 
Sbjct: 2428 SI--LSGNDHKHFVIDSATGIITLSNLRRHALKPFYGLNLSVSD-GVFRSSTQVHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I +T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1705 NTG-DAFDINPHSGTI-STQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
           T    F ID  +GV+     L   +  E Y + ++A D   +  Q    V V   +   N
Sbjct: 867 T----FSIDSVTGVVRIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVVVKVSLEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSVDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ +  TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N  SPVF 
Sbjct: 2226 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVEDINDNSPVFA 2284

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y   +SE + I ++V  +
Sbjct: 2285 QQSYAATLSEASVIGTSVVQV 2305


>gi|383861450|ref|XP_003706199.1| PREDICTED: protein dachsous-like [Megachile rotundata]
          Length = 2659

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 17/187 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
           + ++E LDR+    G     + AR+ QGT   AA VP+ +TV   D+NDN+P +  P   
Sbjct: 445 ITTREPLDRE--TKGVHELVLEARD-QGTPSRAARVPLKVTVL--DVNDNSPEIVDPQGD 499

Query: 58  PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
            + ++  +    ++ ++ A D DLG NA +TY+I    ++ G + F IDP +G+I T   
Sbjct: 500 VVSVREEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAV 559

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
           L   E+  Y ++V+ATD G     +I  + V V+   + R P F  ++   NV E ASI 
Sbjct: 560 LDHEERNVYRVSVKATDAGRPPRHSIRALRVEVLALADNR-PTFTSSSLTFNVREDASIG 618

Query: 172 STVATIT 178
             V +++
Sbjct: 619 QAVGSVS 625



 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 18/191 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
            ++ +  +LDR+  N   + F V+A +         SVPV + V+  D+NDN P     P 
Sbjct: 1216 VITTAGSLDRERQN--SYNFMVVATDSGKYDAKTTSVPVEIRVS--DVNDNGPVFEEHPF 1271

Query: 58   PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
              ++  G +  + I+++ ATD D G N EI YS  H       KFRI P +G +     L
Sbjct: 1272 RARVSIGTQPEKNILRVVATDADEGANGEIIYSFLHEQEK--PKFRIHPSTGAVTAALSL 1329

Query: 117  IA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASI 170
                G+ Y + V A D G   KS++ ++E+ V    +  +PV  FQ  TY+V V E ++ 
Sbjct: 1330 SQDNGKTYHLEVLARDKGNPPKSTRGLIELQVGDLADL-TPVLKFQNETYEVVVQENSAA 1388

Query: 171  NSTVATITVSR 181
             + V  +T  R
Sbjct: 1389 GTEVLQVTAVR 1399



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 24/202 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRF-QVIARE-----------KQGTAASVPVSLTVNLNDIND 48
           YLV  + +L  DP + G  R  Q + RE           + G +      L VN+ D+ND
Sbjct: 124 YLVKEEPDLTMDP-STGMLRIRQSLDREARDKYILSVEARNGISVGY-CQLEVNVEDVND 181

Query: 49  NAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP 105
           NAP  P    ++I   E+      +    ATD D+  +  + Y +   SN     F ID 
Sbjct: 182 NAPMFPTTN-VRISVPESHPLHTALYVAHATDPDIVPSHPLRYVLGQNSN---DLFGIDG 237

Query: 106 RSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           R+G +    +L    Q  + + ++A D  G S+   + V V    N   PVF++N Y V 
Sbjct: 238 RTGELYLARRLDYETQQRHGLLIRALDGAGLSANLSLSVEV-QDVNDNPPVFERNEYHVE 296

Query: 164 VSEGASINSTVATITVSRLASG 185
           V EGA ++S +  +T   L +G
Sbjct: 297 VPEGAKLDSQILQVTAVDLDTG 318



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 89/215 (41%), Gaps = 62/215 (28%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
            +S  NLDR+     K+   + A++K   +     +LTV + D+NDNAP       +  Q 
Sbjct: 1075 LSMSNLDRE--TVAKYVLTISAKDKGRPSLEARCNLTVIVLDVNDNAPTF-----VSNQY 1127

Query: 64   GEAR----------------------------------------------RQIVKIEATD 77
             E+R                                                I+ ++ATD
Sbjct: 1128 TESRPRGAVQNSEYPGFNLPNGFPYASPNFPTNAYLNKYVATISEDVAPDSSIMSVKATD 1187

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--- 132
             D GVN +ITYSI   ++     FR+D  +GVI T G L    Q  Y+  V ATD+G   
Sbjct: 1188 PDQGVNGKITYSIAEETS---WLFRVDNLTGVITTAGSLDRERQNSYNFMVVATDSGKYD 1244

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             K++   VE+  V   N   PVF+++ +   VS G
Sbjct: 1245 AKTTSVPVEIR-VSDVNDNGPVFEEHPFRARVSIG 1278



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 16/145 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L ++L D+NDN+P+ P+   ++   GE       +    A+D D G+   + YSI   + 
Sbjct: 2018 LRIHLEDVNDNSPKFPVSEYLEF-VGENEPIGTTVFSARASDLDRGIFGSLNYSIVSAAA 2076

Query: 96   TGLHK-------FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
            TG          F +D +SG + TT  +   E   +Y+ T++ATDTGG+++   V    +
Sbjct: 2077 TGFSDIDDSWKLFAVDGKSGTV-TTRAIFDYELRNRYAFTLRATDTGGRTAAVRVR-GEI 2134

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   P F +  Y   +  G  +
Sbjct: 2135 ESRDEFYPQFTERMYRFGIKSGTQV 2159



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L++ + DINDN P  P    I    G A   ++    T 
Sbjct: 1586 KYRLTIIATDQGNPQLTGTAALSIRVIDINDNQPTFPEHRIISASEGTAVGTVLTT-ITA 1644

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  + Y   +V++ G   F ID   G +    +L A    +YS+ V A+D  G  
Sbjct: 1645 NDVDSSPALIYRFGNVTSPG--PFSIDKYGGKVVLRRRLDAETRSEYSLQVIASD--GIH 1700

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
              T   V  V   N  +P+FQQ+ Y   + EG 
Sbjct: 1701 EATTDLVVRVTDLNDNAPIFQQSAYIATLPEGG 1733



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG--EQYSITV 126
            +VK+ A+D D G+N+ I Y I  V     + F I  P SG++ T   L     E+Y +T+
Sbjct: 1534 VVKLSASDADQGMNSRILYHI--VDGNPDNAFTISPPYSGIVRTNIVLDREIREKYRLTI 1591

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ATD G         +S+ V   N   P F ++   ++ SEG ++ + + TIT + + S 
Sbjct: 1592 IATDQGNPQLTGTAALSIRVIDINDNQPTFPEHRI-ISASEGTAVGTVLTTITANDVDSS 1650

Query: 186  CAIMNKEEN 194
             A++ +  N
Sbjct: 1651 PALIYRFGN 1659



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 16/164 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           +V   +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDN PR P   PI 
Sbjct: 658 LVVAHSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIVIEDANDNPPRWPQ-DPIT 714

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKL 116
           ++  E       I  + A+D D G N ++ Y  +    + G   F +D  +G +     L
Sbjct: 715 VRVSERAVIGSTIYNLTASDLDSGPNGDLRYGLVAEFPSRG--SFAVDSLTGALTLARPL 772

Query: 117 IAGE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
              E  +Y++ ++A+D    G + + T+    +V   N   PVF
Sbjct: 773 DREERAEYTLILKASDRAPPGEQLASTVTARIIVLDQNDNDPVF 816



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPR-LPMI 56
            L++SK  LDR+  +  ++  ++ ++ +  T  S+    P+++ V + D+NDN PR L  +
Sbjct: 1871 LMLSK-TLDRETKD--RYVLRLGSKNENMTTGSLVGDEPITVIVTVEDVNDNYPRFLEEL 1927

Query: 57   PPIQIQAGEAR-RQIVKIEATDNDLGVN--AEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              + I+   AR   +  + A D+DL  +  A + Y I   ++ GL  FR++  +G +   
Sbjct: 1928 HQVFIKENAARGTTVATLRAKDDDLAGSEAANLVYEITSGNDGGL--FRVEKSTGAVLVN 1985

Query: 114  GKL---IAGEQYSITVQATDTGGKS-----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
              L   +  + +++ V A D+   S     ++  + +  V   N  SP F  + Y   V 
Sbjct: 1986 ATLDCDLEPDVHNLVVMACDSDPISPLCALARLRIHLEDV---NDNSPKFPVSEYLEFVG 2042

Query: 166  EGASINSTVATITVSRLASG 185
            E   I +TV +   S L  G
Sbjct: 2043 ENEPIGTTVFSARASDLDRG 2062



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           ++ +E+LDR           V+A +    AA+   S+ V + D NDN PR        ++
Sbjct: 347 ILDRESLDR-------HALTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGFEL 399

Query: 62  QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                   +V  + A+D DLG NA + Y++   +++    F +DP +G I T   L    
Sbjct: 400 LENLPSGTLVGSVSASDPDLGKNALLRYAVVQANSS----FTVDPDTGEITTREPLDRET 455

Query: 121 Q--YSITVQATDTGGKSSQTIVEVSV 144
           +  + + ++A D G  S    V + V
Sbjct: 456 KGVHELVLEARDQGTPSRAARVPLKV 481



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D NDN+P  R      + +   +    I  I ATD D G N EI YSI    N
Sbjct: 1003 TLEVLVMDENDNSPEFRPGSCYTLAVPENQESSVIHTIAATDLDEGKNGEIYYSIVG-GN 1061

Query: 96   TGLHKFRIDPRSGVIETTG---KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
             G  KF +D  +G +  +    + +A  +Y +T+ A D G  S +    ++V V   N  
Sbjct: 1062 IGA-KFILDSVTGKLSMSNLDRETVA--KYVLTISAKDKGRPSLEARCNLTVIVLDVNDN 1118

Query: 152  SPVFQQNTYDVNVSEGASINS 172
            +P F  N Y  +   GA  NS
Sbjct: 1119 APTFVSNQYTESRPRGAVQNS 1139


>gi|351713328|gb|EHB16247.1| Protocadherin Fat 3 [Heterocephalus glaber]
          Length = 3464

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1397 VITTERLDRE--NPLEGDVSIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1454

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1455 RADVGRGHLVTQVQAMDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 1514

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E A+I STV 
Sbjct: 1515 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDAAIGSTVD 1573

Query: 176  TITV 179
            T+ +
Sbjct: 1574 TLRI 1577



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 362 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 419

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
             ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 420 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 477

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q+ ++V+ TD G    S+  IV VSV    N+  P F    Y   V+E   I ++V 
Sbjct: 478 TMGQFVLSVKVTDQGSPPMSATAIVRVSVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 536

Query: 176 TIT 178
            I+
Sbjct: 537 LIS 539



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 15/164 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 2050 GQSLSSVATITITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 2105

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KFRI+P++G I  +  L     +++ + V+A D G  +      
Sbjct: 2106 AEITYLIRSGNEQG--KFRINPKTGGISVSEALDYELCKRFYLVVEAKDGGTPALSAAAT 2163

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            VS+ +   N   P F Q+ Y   +SE A +  +V  +    + S
Sbjct: 2164 VSINLTDVNDNPPKFSQDIYSAVISEDALVGDSVILLIAEDIDS 2207



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 16/145 (11%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V ++D+NDN+P    +      P  I    + + I+K+ A D D+G + +I YS+Y    
Sbjct: 1854 VTVSDVNDNSPVCDEVAYTASFPEDI---PSNKIILKVSAKDADIGSSGDIQYSLY---G 1907

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            +G ++F +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   
Sbjct: 1908 SGSNEFFLDPESGELKTLA-LLDRERVPAYNLISRATDGGGRFCQSDIHL-ILEDVNDNP 1965

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF  + Y+  V E  +  + +  +
Sbjct: 1966 PVFSSDHYNACVYENTATKALLTRV 1990



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 918  NIEDINDNSPIFVGLPYYAAVQVDA-EPGTLIYRVTAIDRDKGANGEVTY----VLQDDY 972

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F+I+P SG +   E     ++  +Y +TV A D G  S  T VE+ +    N   PVF
Sbjct: 973  GHFKINPNSGNVILKEAFNSDLSNIEYEVTVVAKDGGKPSLSTSVELPITI-VNKAMPVF 1031

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E    ++ + +I
Sbjct: 1032 DKPFYTASINEDIRTDTPILSI 1053



 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+Y+I 
Sbjct: 83  IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYNIV 141

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
             ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 142 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKFSTARLHIEWIKKPP 199

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F +  Y+  V E   +   +  ++V
Sbjct: 200 PSPIPLTFDEPFYNFTVMESDRVTEIIGVVSV 231



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 19/174 (10%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKI 73
            F F+V A    +K     +V V + V   D+NDN P         I ++      ++ ++
Sbjct: 1616 FHFKVAATLPLDKVDIVFTVDVDIKVL--DLNDNKPVFETSSYETIIMEGMPVGTKLTQV 1673

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQYSITVQ 127
             ATD D G N ++TYS++  S++ L K    F ID  +G I T   L       +S +V 
Sbjct: 1674 RATDLDWGANGQVTYSLH--SDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPAFSFSVV 1731

Query: 128  ATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 1732 ASDLGEAFSLSSMALVSVRVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 1784



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 297 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 353

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 354 FRIDPTTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 413

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S V  +T
Sbjct: 414 PLYEASVFESAALGSAVLQVT 434



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
           NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 683 NLDHE--TIAHFHFHVQVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFSQAVFETVLLL 739

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                 +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 740 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 796

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + V+ +D  GK   T +   +V         F Q+ Y  ++ E
Sbjct: 797 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSILE 838



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D G N  + Y
Sbjct: 1110 TGARAEVTVDLLVNDVNDNPPVFNQPTYNTTLSEASLIGTPVLQVVSTDIDSGNNKMVHY 1169

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG++  T +++  E     ++ V+ATD G    SS+ +V + 
Sbjct: 1170 QIVQDTYNSTDYFHIDSSSGLM-LTARMLDHELVQHCTLKVRATDNGFPSLSSEVLVHIH 1228

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1229 -ISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1264



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 7/100 (7%)

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEV 142
           + Y +   +N G+  F I+P SGVI TT + +  E    Y + +QAT+  G +S   V +
Sbjct: 546 LIYEVKDGNNDGI--FTINPYSGVI-TTRRTLDYEHTSSYQLIIQATNMAGMASNATVNI 602

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            +V   N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 603 QIV-DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 641



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + ++++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 1207 LKVRATDNGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 1266

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 1267 DSSDIDRLEYSI--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 1323

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 1324 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 1360



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +I+R   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 1936 YNLISRATDGGGRFCQSDIHLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 1995

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   +N G           ++E          Y+I+V+A+D   G+S  
Sbjct: 1996 DIGINRKVVYSLAASAN-GFFSIDSISGIIILEQPLDREQQSSYNISVRASDQSPGQSLS 2054

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  +++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 2055 SVATITITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 2095



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 1356 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 1412

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1413 -VSIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1454


>gi|345450784|gb|AEN93982.1| cadherin 1 [Oscarella sp. SN-2011]
          Length = 2330

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 13/159 (8%)

Query: 29  QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAE 85
            G   SV   L V L D+N++AP+  +I   +I   +    RR+I+++ A D D G NA+
Sbjct: 89  DGGGNSVSCQLEVTLIDVNNHAPQF-LISIYEITVSDKIDHRREILRVSADDEDEGFNAK 147

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVE 141
           I YSI  + NT +  F +D    +  + G+L A +  Q++  VQATD G     S+  V 
Sbjct: 148 IRYSI--IPNTTI--FTVDDWGKIFASQGRLDANQTKQHAFEVQATDEGQPALWSRASVV 203

Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           V+V  GP +++PVF +  Y   V E   + + VA +  S
Sbjct: 204 VNVTDGP-SKAPVFDRFDYFATVEENRPVGTYVARLNAS 241



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 17/139 (12%)

Query: 39  LTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
           L V++ D+NDN+P          +P  +    E  R    + ATD D G N ++TY +  
Sbjct: 304 LHVSVIDVNDNSPDFEFHEHRFVVPENRAVGAEVGR----VFATDLDSGSNGKVTYKLKK 359

Query: 93  VSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
             +  L  F +DP +G I T        +  + +   V+A D G +S      V + +  
Sbjct: 360 ALDAQL--FDVDPNTGRISTRTVFDRENLTSQYFYAVVEARDGGKRSLSRDALVRIQIAD 417

Query: 148 PNTRSPVFQQNTYDVNVSE 166
            N   P F + TY V++ E
Sbjct: 418 VNDNPPFFSKPTYSVSLRE 436



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
           ++ A D D   N E+TYS++   ++    F ID  +G + T G L       Y   V A 
Sbjct: 548 RLSAGDVDTPPN-EVTYSMFSRRDS--DDFAIDALTGRVVTRGILDRERHKLYEYAVVAE 604

Query: 130 DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           D  G   QT++ ++V    N R P+F +N+Y   V E + I + VA  T
Sbjct: 605 DAAGNQGQTLLIINV-KDANDRKPIFSENSYIGYVKENSPIGTPVARFT 652



 Score = 42.4 bits (98), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 12/175 (6%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++R  + A +    + S   +++V + D+NDN+P L    +     +      +++ + A
Sbjct: 698 EYRITIRAADGGAVSLSSETNVSVVVEDVNDNSPYLESSFVESRVYEDAPVGWRVLSLSA 757

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-EQYSITVQATDTG-- 132
            D D+  NA + Y I   +  G+  F +D  +  I        G  +Y++T++  D G  
Sbjct: 758 RDGDVDANALVDYQIESGNGNGV--FAVDGNAIKIAKIPDEFPGTNRYNLTIKLLDRGVP 815

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               S   +V++      N  +PVF+ + YDV V E   +   V T++ +    G
Sbjct: 816 RLEGSGSVVVDIL---DANDHAPVFEASLYDVVVPENVRLFRDVLTVSATDADHG 867



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 14/182 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
           VV++  LDR+      + + V+A +  G        L +N+ D ND  P       I   
Sbjct: 583 VVTRGILDRERHK--LYEYAVVAEDAAGNQGQT--LLIINVKDANDRKPIFSENSYIGYV 638

Query: 62  -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IA 118
            +       + +  A D+D G N+ + YS+  V + G  +F I+  +G I T       A
Sbjct: 639 KENSPIGTPVARFTANDDDEGNNSLLVYSL--VDSAG-GRFWINSATGWISTASVFNREA 695

Query: 119 GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             +Y IT++A D G    SS+T V V VV   N  SP  + +  +  V E A +   V +
Sbjct: 696 VSEYRITIRAADGGAVSLSSETNVSV-VVEDVNDNSPYLESSFVESRVYEDAPVGWRVLS 754

Query: 177 IT 178
           ++
Sbjct: 755 LS 756



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 25/142 (17%)

Query: 38  SLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS--- 89
           S+ V++ D ND+AP        ++ P  ++     R ++ + ATD D G+NAEI Y+   
Sbjct: 822 SVVVDILDANDHAPVFEASLYDVVVPENVRL---FRDVLTVSATDADHGINAEIHYNLVD 878

Query: 90  ---IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQT-IVEVSV- 144
              ++ +S+ G H   I P     ET        QY++TV+A D G +   T    VSV 
Sbjct: 879 FDDVFQLSSDG-HFQVIRPLD--YETR------NQYNLTVRAIDGGRRVQLTGTARVSVT 929

Query: 145 VPGPNTRSPVFQQNTYDVNVSE 166
           V   N  +P F+   Y   V E
Sbjct: 930 VTDVNDNAPSFETTIYATKVVE 951



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 40  TVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTG 97
           TV +  +N +AP   P      +     R   V +I ATD D G N  +TY +    N  
Sbjct: 1   TVVIGSVNPHAPSFAPETCFANLTEASPRGTFVTRIVATDPDFGSNGIVTYEVSQGFN-- 58

Query: 98  LHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRI   +G +     L +  +  S  V A D GG S    +EV+++   N  +P F 
Sbjct: 59  ---FRISNTTGDVYADAILTLPPKMLSAGVAAFDGGGNSVSCQLEVTLID-VNNHAPQFL 114

Query: 157 QNTYDVNVSE 166
            + Y++ VS+
Sbjct: 115 ISIYEITVSD 124


>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
 gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
          Length = 3556

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 903  QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 962

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + +++YS+  VS++G   F ID RSG +  T  L   + +++S+ V ATD G  S  T +
Sbjct: 963  SGQVSYSL--VSDSGKRLFAIDARSGHLSLTQHLDYESSQRHSLIVTATDGGVPSLSTNL 1020

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF++  Y VNVSE  SIN+ +  +  S L +G
Sbjct: 1021 TILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTG 1066



 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 2007 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPVFERYPY 2062

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 2063 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLKAENSAVSAKFRINPSTGALSAS 2119

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV  FQ  TY V + E
Sbjct: 2120 QSLASESGKLLHLEVIARDKGTPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 2177



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + ++++D+NDNAP +  P    + 
Sbjct: 1208 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1265

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L  
Sbjct: 1266 VREEQPPGTEVVRVRAVDRDNGQNASITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDH 1325

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V A+D G    +TI  + V V   N   P F  ++    V E A++   V 
Sbjct: 1326 EERSIYRLGVAASDGGSPPRETIRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVG 1385

Query: 176  TIT 178
            +I+
Sbjct: 1386 SIS 1388



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 454 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHA 511

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ +TYS+     T    F+IDP++G+I T   +  
Sbjct: 512 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 571

Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 572 ETEPVPQLTVIARDGGVPPLSSTATILVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 631

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 632 KVSASDPDCGVNAM 645



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 21/185 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
            R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 1001 RHSLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-EEYSVNVSESRSINAQIIQVN 1059

Query: 75   ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A+D D G NA ITY I              S+   H F I P SG I     L     ++
Sbjct: 1060 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDRETRDR 1118

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +TV ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S
Sbjct: 1119 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1178

Query: 181  RLASG 185
             L  G
Sbjct: 1179 DLDLG 1183



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAP   +      +
Sbjct: 1904 LSARPLDRE--QHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPSFKLSKYTGSV 1961

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +++I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1962 QEDAPLGT-SVLQINAVDADLGVNARLVYSL---ANETQWQFAIDSQSGLITTVGKLDRE 2017

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V ATD G    +S+   V+++V+   + R PVF++  Y
Sbjct: 2018 LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNR-PVFERYPY 2062



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  VIAR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 578 QLTVIARDGGVPPLSSTATILVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 637

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 638 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 696

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +  ++++ +    + R PVF    Y V++ E
Sbjct: 697 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRE 726



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P  R      + +        I  + A+D D G NA++ YSI    N
Sbjct: 1832 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1890

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID  SG  E + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1891 LG-NKFSIDSSSG--ELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1947

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F+ + Y  +V E A + ++V  I
Sbjct: 1948 NAPSFKLSKYTGSVQEDAPLGTSVLQI 1974



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI      
Sbjct: 2848 FRLELHDENDNDPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD 2907

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+D  +G++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2908 ESSWKMFRVDSETGLV-TSAFVFDYEQRQRYDMELLASDMGGKKAGVAVRVE-IESRDEF 2965

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2966 TPQFTERTY 2974



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  V+A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1111 LDRETRD--RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1168

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1224

Query: 125  TVQATDTG 132
             V+A D G
Sbjct: 1225 VVEARDQG 1232



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 270 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 326

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 327 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 386

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 387 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 421



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 29/168 (17%)

Query: 38   SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            S+TV L   D NDNAP+             +      + GE    IV   A D D G N 
Sbjct: 1585 SVTVRLRVLDANDNAPKFVSPNSSGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1641

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---K 134
             +TY I      G  +FRI+ ++G+IE        T  +  G ++++ + A D G    K
Sbjct: 1642 RLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIISAKDHGQPEPK 1699

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             S   + + +V G +   P F Q  Y   + E     S V  +T   L
Sbjct: 1700 KSSLNLHL-IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1746



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPI 59
            LVV++  LDR+  +  +FR ++ A +   T    S  +++ + + D+NDNAP  P   PI
Sbjct: 1435 LVVARL-LDREVQS--EFRLEIRALDTTATNNPQSSAITVKIEVADVNDNAPEWPQ-DPI 1490

Query: 60   QIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRSGV 109
             +Q  EA      I    ATD D G N ++ Y +              +  F +D  +G 
Sbjct: 1491 DLQVSEATPIGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMTLFSMDSLTGS 1550

Query: 110  IETTGKLIAG--EQYSITVQATD 130
            +     L     ++Y + VQA D
Sbjct: 1551 LSLQAPLDFETVQEYLLIVQALD 1573



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 31/199 (15%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------------RLPMIPPIQIQAGE 65
            ++   VIA +    A +V   LTV +ND NDNAP             LP I  I  ++  
Sbjct: 2500 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAVLPAISEIS-ESLS 2555

Query: 66   ARRQIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------A 118
               +++ + ATD D  G N+++ Y I          F + P +GV+      +      +
Sbjct: 2556 VDFELLTVNATDADSEGNNSKVIYVI----EPAQEGFTVHPSNGVVSVNMTRLQPAVSPS 2611

Query: 119  GEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            G+ Y + + A D G     S T++ V      + RS  F Q+ Y   +SE A + S V  
Sbjct: 2612 GD-YFVRIIAKDAGKPVLKSSTLLRVQASDNGSGRSQ-FLQSQYRAQISESAPLGSVVLQ 2669

Query: 177  ITVSRLASGCAIMNKEENS 195
            +    L    AI+   E S
Sbjct: 2670 LGQDALDQSFAIIAGNEES 2688



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 26/176 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 683 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKAPTQASST--P 738

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG----EQYSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +        + + 
Sbjct: 739 IVAVVATDPDSGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 796

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
           + ATD G   S    +V +S++     R P+F++  Y+  V E    G  + S +A
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA 851



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P +    ++AR       +    L + L D NDN+P+      +  +  G  +   V ++
Sbjct: 2285 PNEIHVVLVARTADAPFLATYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQV 2344

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + ATD
Sbjct: 2345 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 2402

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + V +V   N   P F  N   V VSE   + + + +I+
Sbjct: 2403 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2450


>gi|350588390|ref|XP_003357289.2| PREDICTED: protocadherin Fat 3 [Sus scrofa]
          Length = 4301

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2551 VITTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G NA ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQAMDPDDGANARITYSLYSEASVSVADLLEIDPDNGWMVTKGHFNQL 2668

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                 S  V+A D G      ++ V + V  P T  P F Q+ Y   VSE  +I STV T
Sbjct: 2669 KNTVLSFFVKAVDGGIPVRHALIPVYIHVLPPETFLPSFTQSQYSFTVSEDTAIGSTVDT 2728

Query: 177  ITV 179
            + +
Sbjct: 2729 LRI 2731



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E   QI ++ A D D G N E+TY    V     
Sbjct: 2072 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTQIYRVTAIDKDKGANGEVTY----VLQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2127 GHFEINPTSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E  S+++ + +I
Sbjct: 2186 DKPFYTASINEDVSVDTPILSI 2207



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 8/141 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 3016 VTVSDVNDNSPVCDQVAYTAVFPEDIPSNKIILKVSAKDADIGSNGDIRYSLY---GSGN 3072

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            ++F +DP SG ++T  +L       Y++  +ATD GG+  Q+ + + ++   N   PVF 
Sbjct: 3073 NEFFLDPESGELKTLARLDRERIPVYNLVARATDGGGRFCQSDIRL-ILEDVNDNPPVFS 3131

Query: 157  QNTYDVNVSEGASINSTVATI 177
             + Y+  V E  +  + +  +
Sbjct: 3132 SDHYNACVYENTATKALLTRV 3152



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    V+ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 VLYTAERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1574 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1632 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1354 PSPVPLTFDEPFYNFTVMESDRVTEIVGVVSV 1385



 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            +V+ ++ LDR+      +   V A ++  G A S   ++T+ + DINDN P       L 
Sbjct: 3185 IVILEQPLDRE--QQSAYNISVRATDQSPGQALSSLATVTITVLDINDNPPVFERRDYLV 3242

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI P++G I  + 
Sbjct: 3243 TVP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFRIHPKTGGISVSE 3296

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
             L     +++ + V+A D G  +   +  VS+ +   N   P F Q+ Y   +SE A + 
Sbjct: 3297 ILDYELCKKFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPRFSQDVYSAVISEDALVG 3356

Query: 172  STV 174
             +V
Sbjct: 3357 DSV 3359



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LT+N+ D NDN+P           +++     +I+++EA D DLG N E+TYS+     T
Sbjct: 816 LTINVEDANDNSPVFLQDSYSVTILESSSIGTEIIQVEARDKDLGSNGEVTYSVL----T 871

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
              +F I+  +G++    +L   +   YS+ ++A D      Q    V++   +   N  
Sbjct: 872 DTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLEVFLDDVNDC 931

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           SP F  ++Y V V E   + + +A +
Sbjct: 932 SPAFIPSSYSVKVLEDLPVGTVIAWL 957



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+ ++    
Sbjct: 1105 LDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPK 1162

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  EQ   + 
Sbjct: 1163 DVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINSKTGLITTTSRKLDREQQAEHF 1220

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1221 LEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1264



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  + +  + K
Sbjct: 1451 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDSISMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 1508 FRIDPSTGVLYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSAVLQVT 1588



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++AR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YNLVARATDGGGRFCQSDIRLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAMDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   +N G   F ID  SG++     L   +Q  Y+I+V+ATD   G++
Sbjct: 3158 DVGINRKVVYSLADSAN-GF--FSIDGSSGIVILEQPLDREQQSAYNISVRATDQSPGQA 3214

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3215 LSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3257



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1837 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1893

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ A D D  V  E+TYS+   S   L  F ID  +GV+      ++ + Y
Sbjct: 1894 PTYVGVEVLKVSAVDPDSEVPPELTYSLMEGS---LDHFLIDSSTGVLTIKNNNLSKDHY 1950

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D G   S ++V + V    ++    F Q+ Y  ++SE  S  + VA +
Sbjct: 1951 LLIVKVSD-GKFYSTSMVNILVKEAMDS-GLHFTQSFYSTSISENNSNITKVAIV 2003



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +NDINDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2264 TGARAEVTVDLLVNDINDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD+G    SS+ +V + 
Sbjct: 2324 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCTLKVRATDSGFPSLSSEVLVHI- 2381

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPVG 2829

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2830 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPAFT 2889

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2890 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 884  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLEVFLDDVNDCSPAFIPSSYS 941

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 942  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 998

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 999  YEKQQFYNLTVRAKDKG 1015



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI TT K +  E    Y + VQAT+  G +S   V + +V   N  +PVF  
Sbjct: 1713 FTINPYSGVI-TTRKALDYEHTSSYQLIVQATNMAGMASNVTVNIQIV-DENDNAPVFLF 1770

Query: 158  NTYDVNVSEGASINSTVATITVSRL 182
            + Y  ++SE A INS V ++  S L
Sbjct: 1771 SQYSGSLSEAAPINSIVRSLDNSPL 1795



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+ + D ND+ P    P+      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 457 VTIGIEDANDHTPEFQQPLYDAFVNESVPVGTSVLTVSASDKDKGENGYITYSI---ASL 513

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            L  F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 514 NLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 573

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 574 SPLFEK 579



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            KF   V A++    A S   ++++NL D+NDN PR        + + +A     ++ + A
Sbjct: 3305 KFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPRFSQDVYSAVISEDALVGDSVILLIA 3364

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG----KLIAGEQYSITVQATDT 131
             D D   N +I +SI  V+     +F +DP  G+++       + ++G  YS+ VQA D+
Sbjct: 3365 EDADSQPNGQIRFSI--VNGDRDSEFAVDPVLGLLKVKKKLDRERVSG--YSLLVQAVDS 3420

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3421 GIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLMVT 3470



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVISTADILDRETTGS------ 1112

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1113 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1152



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 149 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 204

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 205 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 238



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2361 LKVRATDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDGKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 2514



 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  I  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 419 FKINPRSGLIVTAQPLNTIKKEVYKLGVTNKEGDLKAQVTIG----IEDANDHTPEFQQP 474

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 475 LYDAFVNESVPVGTSVLTVSASDKDKG 501



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +    +  Y + + 
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHRDLYLLNIT 801

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   +SS  ++ ++V    N  SPVF Q++Y V + E +SI + +  +
Sbjct: 802 IYDLGNPQRSSWRLLTINV-EDANDNSPVFLQDSYSVTILESSSIGTEIIQV 852



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2510 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDGNGQVI-TTERLDRENPLEGD 2566

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2567 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2608


>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
          Length = 3229

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 17/187 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
            + +KE LDR+    G     + AR+ QGT   AA VP+ +TV   D+NDN+P +  P   
Sbjct: 1016 ITTKEPLDRE--TKGVHELVLEARD-QGTPSRAARVPLKVTVL--DVNDNSPEIVDPQGD 1070

Query: 58   PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
             + ++  +    ++ ++ A D DLG NA +TY+I    ++ G + F IDP +G+I T   
Sbjct: 1071 VVSVREEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAV 1130

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   E+  Y ++V+ATD G      I  + V V+   + R P F  ++   NV E ASI 
Sbjct: 1131 LDHEERNVYRVSVKATDAGRPPRHGIRALRVEVLALADNR-PTFTSSSLAFNVREDASIG 1189

Query: 172  STVATIT 178
              V +++
Sbjct: 1190 QAVGSVS 1196



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 12/172 (6%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEA 75
            + F V+A +  +  A S  + + + ++D+NDNAP     P   ++  G +  + I+++ A
Sbjct: 1802 YNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFDEYPFRARVSIGTQPEKNILRVVA 1861

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            TD D G N E+ YS  H       KFRI P +G +     L    G+ Y + V A D G 
Sbjct: 1862 TDADDGPNGEVVYSFLHEQEK--PKFRIHPSTGAVTAALSLSQDNGKTYHLEVLARDKGN 1919

Query: 134  --KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASINSTVATITVSR 181
              KS++ ++E+ V    +  +PV  FQ  +Y+V + E ++  + V  ++  R
Sbjct: 1920 PPKSTRGLIELQVGDLADL-APVLKFQNESYEVVIQENSAAGTEVVQVSAVR 1970



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 16/145 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L ++L D+NDN+P+ P+   ++   GE       +    A+D D G+   + YSI   + 
Sbjct: 2588 LRIHLEDVNDNSPKFPVSEYLEF-VGENEPIGTIVFSARASDLDRGIFGSLNYSIVSAAA 2646

Query: 96   TGLHK-------FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
            TG          F +D +SG + TT  +   E   +Y+ T++ATDTGG+++   V V  +
Sbjct: 2647 TGFSDIDDSWKLFAVDGKSGTV-TTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVE-I 2704

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   P F +  Y   +  GA +
Sbjct: 2705 ESRDEFYPQFTERMYRFGIKNGAQV 2729



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  K+   V AR   G +A     + +N+ D+NDNAP  P    ++I   E+  
Sbjct: 718 LDRETRD--KYILSVEAR--NGISAGY-CQVELNVEDVNDNAPTFPT-SSVRISVPESHP 771

Query: 68  --RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               +    ATD D+  +  I Y +   SN     F ID RSG +    +L    Q  + 
Sbjct: 772 LHSALYVAHATDPDIVPSHPIRYVLGQNSN---DLFGIDGRSGELYLARRLDYETQQRHG 828

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + ++A D  G S+   + V V    N   PVF++N Y V V EGA ++S +  +T   L 
Sbjct: 829 LLIRALDGAGLSANLSLSVEV-QDVNDNPPVFERNEYHVEVPEGAKLDSQILQVTAVDLD 887

Query: 184 SG 185
           +G
Sbjct: 888 TG 889



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 62/216 (28%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            ++S  NLDR+  +  K+   + A++K   +     +LTV + D+NDNAP       +Q Q
Sbjct: 1645 MLSMSNLDREAVS--KYILTISAKDKGRPSLETRCNLTVIVLDVNDNAPSF-----VQNQ 1697

Query: 63   AGEAR----------------------------------------------RQIVKIEAT 76
              E+R                                                ++ + AT
Sbjct: 1698 YTESRPRGPVPSSEYPGFALSNGFSYGSSNYPTNYYPSKYVATISEDVAPDSSVMSVRAT 1757

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
            D D GVN +ITY+I   ++     FR+D  +GVI T G L    Q  Y+  V ATD+G  
Sbjct: 1758 DPDQGVNGKITYAIGEETS---WLFRVDNLTGVITTAGPLDRERQTSYNFVVVATDSGKY 1814

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              +S+   VE+  V   N  +PVF +  +   VS G
Sbjct: 1815 DARSTTIPVEIR-VSDVNDNAPVFDEYPFRARVSIG 1849



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 14/195 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           YLVV +  LDR+      +   V A +          +  + + D+NDNAP+        
Sbjct: 294 YLVVVERPLDRE--EKPVYDLSVEATDAGTPPLRAVRTFRLVVTDVNDNAPKFGRERYEA 351

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++A E    ++K+ ATD D G N+ I YS+ + +      F ID  SG+I T   +  
Sbjct: 352 HLLEASEPGTPVLKVTATDLDEGANSAIKYSLLNST-----WFVIDETSGLISTRTHVDC 406

Query: 119 GEQYS--ITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               +  + V ATD+G    SS   V V+ V   N   P+F++  Y+  VSE   + S  
Sbjct: 407 EADPAPILVVIATDSGRPPLSSSATVRVT-VHDLNDNEPIFEKPLYNATVSEDMPVGSCF 465

Query: 175 ATITVSRLASGCAIM 189
             +  +    G   M
Sbjct: 466 LKVQATDPDCGVNAM 480



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 15/184 (8%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRLPMIPPIQIQAGE 65
           +LDR+     + R+ ++     G A  +   L VN+   D+NDN P       +   A  
Sbjct: 83  SLDRE----ARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASIAEN 138

Query: 66  AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
           A     ++ + ATD+D G N  I YSI    +     FRIDP +G++     L   + E+
Sbjct: 139 ATVGTPVLAVNATDSDAGDNGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKER 198

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTVAT 176
           + + + A D G +  +    +SV V   N   P    +F  +     +SE A     VA 
Sbjct: 199 HELVIVARDRGAQPLEASAFLSVRVTDVNDNQPAITVIFLSDDATPKISESAQPGEFVAR 258

Query: 177 ITVS 180
           I+VS
Sbjct: 259 ISVS 262



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 2157 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPEHSIISVSEGTAVGTVLTT-ITA 2215

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  ++Y   +V++ G   F ID   G +    +L A    +YS+ V A+D  G  
Sbjct: 2216 NDVDSSPALSYRFGNVTSPG--PFSIDRYGGKVVLRRRLDAETRSEYSLQVIASD--GVH 2271

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              T   +  V   N  +P FQQ+ Y   + EG
Sbjct: 2272 EATTDLIVRVMDLNDNAPRFQQSAYIATLPEG 2303



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 23/158 (14%)

Query: 44   NDINDNAPRLPMIPPIQIQA--------GEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
            +D+NDN       PPI  Q         G  +   +VK+ A+D D G+N+ I Y I  V 
Sbjct: 2077 SDVNDN-------PPIFTQTQYSATVLEGNVKGDFVVKLSASDADQGMNSRILYHI--VD 2127

Query: 95   NTGLHKFRID-PRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                + F I  P SG++ T   L     E+Y +T+ ATD G         +SV V   N 
Sbjct: 2128 GNPDNAFTISPPYSGIVRTNIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDIND 2187

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
              P F +++  ++VSEG ++ + + TIT + + S  A+
Sbjct: 2188 NQPTFPEHSI-ISVSEGTAVGTVLTTITANDVDSSPAL 2224



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 6/168 (3%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
           VIA +      S   ++ V ++D+NDN P    P+      +        +K++ATD D 
Sbjct: 416 VIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLYNATVSEDMPVGSCFLKVQATDPDC 475

Query: 81  GVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQT 138
           GVNA + Y++    + +  L   R D     + T           I V ATD GG S+  
Sbjct: 476 GVNAMVNYTLAAGRMESEQL-MVRSDTGDICVRTPLDRETAPYLEIPVIATDRGGLSTVA 534

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           IV V V    N   P+F+   Y+V +     I   +  +  + L  G 
Sbjct: 535 IVRVQVT-DVNDNRPIFEPRKYNVTLKSDGPIQGPILRLVATDLDVGL 581



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +V   +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDN PR P   PI 
Sbjct: 1229 LVVAHSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIVIEDANDNPPRWPQ-DPIT 1285

Query: 61   IQAGEAR---RQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKL 116
            ++  E       I  + A D D G+N ++ Y  +    + G   F +D  +G +     L
Sbjct: 1286 VRVSEKAVIGSTIYNLTAIDLDSGLNGDLRYGLVAEFPSRG--SFAVDSLTGALTLARPL 1343

Query: 117  IAGE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
               E  +Y + ++A+D    G + + T+    +V   N   PVF
Sbjct: 1344 DREERAEYMLILKASDRAPPGEQLASTVTARIIVLDQNDNDPVF 1387



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 24/200 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPR-LPMI 56
            L++S+  LDR+  +  K+  ++ ++ +  T  S+    PV++ + + D+NDN PR L  +
Sbjct: 2441 LILSR-TLDRETKD--KYVLRLGSKNENMTTGSLVGDEPVTVIITVEDVNDNYPRFLEDL 2497

Query: 57   PPIQIQAGEAR-RQIVKIEATDNDLG--VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              + I+    R   +  + A D+DL   V A + Y I   ++ GL  FR+D  +G ++  
Sbjct: 2498 HQVSIKENAVRGTTVAMLRAKDDDLAGSVAANLAYEITSGNDGGL--FRVDKTTGAVQVN 2555

Query: 114  GKL---IAGEQYSITVQATDTGGKS-----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
              L   +  + +++ V A D+   S     ++  + +  V   N  SP F  + Y   V 
Sbjct: 2556 ATLDCDLEPDIHNLVVMACDSDPVSPLCALTRLRIHLEDV---NDNSPKFPVSEYLEFVG 2612

Query: 166  EGASINSTVATITVSRLASG 185
            E   I + V +   S L  G
Sbjct: 2613 ENEPIGTIVFSARASDLDRG 2632



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQA-GEARRQIVKIEATDNDL 80
           VIA ++ G +    V   V + D+NDN P   P    + +++ G  +  I+++ ATD D+
Sbjct: 522 VIATDRGGLSTVAIVR--VQVTDVNDNRPIFEPRKYNVTLKSDGPIQGPILRLVATDLDV 579

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQYSITVQATDTGGKSSQT 138
           G+  ++ Y I + +  G+  F ID  +G ++      L     + + V ATD  G  S  
Sbjct: 580 GLFGQVAYRITNGNEAGV--FHIDRNTGELQVARPSLLSRSPLHQLNVTATDAAGLKSTF 637

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             EV +    P  R    ++  Y + V E    NS V  +
Sbjct: 638 DAEVRITTSSPGHRIASCEKPRYTITVKETVPQNSIVGGV 677



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D NDN+P  R      + +   +    I  I A D D G N EI YSI    N
Sbjct: 1574 TLEVLVMDENDNSPEFRPGSCYTLAVPENQGTSVIHTIAAADLDEGKNGEIYYSIVG-GN 1632

Query: 96   TGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             G  KF +D  +G++  +     A  +Y +T+ A D G  S +T   ++V V   N  +P
Sbjct: 1633 IGA-KFILDSITGMLSMSNLDREAVSKYILTISAKDKGRPSLETRCNLTVIVLDVNDNAP 1691

Query: 154  VFQQNTY 160
             F QN Y
Sbjct: 1692 SFVQNQY 1698



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ 60
            ++ +E LDR           V+A +    AA+   S+ V + D NDN PR          
Sbjct: 918  ILDRETLDR-------HALTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGFDL 970

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            ++   +   +  + A+D+DLG NA + Y++   +++    F +DP +G I T   L    
Sbjct: 971  LENLPSGTLVGSVSASDSDLGKNALLRYAVVQANSS----FTVDPDTGEITTKEPLDRET 1026

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV 144
            +  + + ++A D G  S    V + V
Sbjct: 1027 KGVHELVLEARDQGTPSRAARVPLKV 1052


>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
          Length = 3327

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 17/187 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
            + +KE LDR+    G     + AR+ QGT   AA VP+ +TV   D+NDN+P +  P   
Sbjct: 1114 ITTKEPLDRE--TKGVHELVLEARD-QGTPSRAARVPLKVTVL--DVNDNSPEIVDPQGD 1168

Query: 58   PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
             + ++  +    ++ ++ A D DLG NA +TY+I    ++ G + F IDP +G+I T   
Sbjct: 1169 VVSVREEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAV 1228

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   E+  Y ++V+ATD G      I  + V V+   + R P F  ++   NV E ASI 
Sbjct: 1229 LDHEERNVYRVSVKATDAGRPPRHGIRALRVEVLALADNR-PTFTSSSLAFNVREDASIG 1287

Query: 172  STVATIT 178
              V +++
Sbjct: 1288 QAVGSVS 1294



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG-E 65
            LDR+      + F V+A +  +  A S  + + + ++D+NDNAP     P   ++  G +
Sbjct: 1892 LDRE--RQSSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFDEYPFRARVSIGTQ 1949

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYS 123
              + I+++ ATD D G N E+ YS  H       KFRI P +G +     L    G+ Y 
Sbjct: 1950 PEKNILRVVATDADDGPNGEVVYSFLHEQEK--PKFRIHPSTGAVTAALSLSQDNGKTYH 2007

Query: 124  ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASINSTVATITV 179
            + V A D G   KS++ ++E+ V    +  +PV  FQ  +Y+V + E ++  + V  ++ 
Sbjct: 2008 LEVLARDKGNPPKSTRGLIELQVGDLADL-APVLKFQNESYEVVIQENSAAGTEVIQVSA 2066

Query: 180  SR 181
             R
Sbjct: 2067 VR 2068



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  K+   V AR   G +A     + +N+ D+NDNAP  P    ++I   E+  
Sbjct: 816 LDRETRD--KYILSVEAR--NGISAGY-CQVELNVEDVNDNAPTFPT-SSVRISVPESHP 869

Query: 68  --RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               +    ATD D+  +  I Y +   SN     F ID RSG +    +L    Q  + 
Sbjct: 870 LHSALYVAHATDPDIVPSHPIRYVLGQNSN---DLFGIDGRSGELYLARRLDYETQQRHG 926

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + ++A D  G S+   + V V    N   PVF++N Y V V EGA ++S +  +T   L 
Sbjct: 927 LLIRALDGAGLSANLSLSVEV-QDVNDNPPVFERNEYHVEVPEGAKLDSQILQVTAVDLD 985

Query: 184 SG 185
           +G
Sbjct: 986 TG 987



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 16/145 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L ++L D+NDN+P+ P+   ++   GE       +    A+D D G+   + YSI   + 
Sbjct: 2686 LRIHLEDVNDNSPKFPVSEYLEF-VGENEPIGTIVFSARASDLDRGIFGSLNYSIVSAAA 2744

Query: 96   TGLHK-------FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
            TG          F +D +SG + TT  +   E   +Y+ T++ATDTGG+++   V V  +
Sbjct: 2745 TGFSDIDDSWKLFAVDGKSGTV-TTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVE-I 2802

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   P F +  Y   +  GA +
Sbjct: 2803 ESRDEFYPQFTERMYRFGIRNGAQV 2827



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 62/216 (28%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            ++S  NLDR+  +  K+   + A++K   +     +LTV + D+NDNAP       +Q Q
Sbjct: 1743 MLSMSNLDREAVS--KYILTISAKDKGRPSLETRCNLTVIVLDVNDNAPSF-----VQNQ 1795

Query: 63   AGEAR----------------------------------------------RQIVKIEAT 76
              E+R                                                ++ + AT
Sbjct: 1796 YTESRPRGPVPSSEYPGFALSNGFSYGSANYPTNYYPSKYVATISEDVAPDSSVMSVRAT 1855

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
            D D GVN +ITY+I   ++     FR+D  +GVI T G L    Q  Y+  V ATD+G  
Sbjct: 1856 DPDQGVNGKITYAIGEETS---WLFRVDNLTGVITTAGPLDRERQSSYNFVVVATDSGKY 1912

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              +S+   VE+  V   N  +PVF +  +   VS G
Sbjct: 1913 DARSTTIPVEIR-VSDVNDNAPVFDEYPFRARVSIG 1947



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           YLVV +  LDR+      +   V A +          +  + + D+NDNAP+        
Sbjct: 392 YLVVVERPLDRE--EKPVYDLSVEATDAGTPPLRAVRTFRLLVTDVNDNAPKFGRERYEA 449

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++A E    ++K+ ATD D G N+ I YS+++ +      F ID  SG+I T   +  
Sbjct: 450 HLLEASEPGTPVLKVTATDLDEGANSAIKYSLFNST-----WFVIDETSGLISTRTHVDC 504

Query: 119 GEQYS--ITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               +  + V ATD+G    SS   V V+ V   N   P+F++  Y+  VSE   + S  
Sbjct: 505 EADPAPILLVIATDSGRPPLSSSATVRVT-VHDLNDNEPIFEKPLYNATVSEDMPVGSCF 563

Query: 175 ATITVSRLASGCAIM 189
             +  +    G   M
Sbjct: 564 LKVQATDPDCGVNAM 578



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 7/152 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 2255 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPEHSIISVSEGTAVGTVLTT-ITA 2313

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  +TY   +V++ G   F ID   G +    +L A    +YS+ V A+D  G  
Sbjct: 2314 NDVDSSPALTYRFGNVTSPG--PFSIDRYGGKVVLRRRLDAETRSEYSLQVIASD--GVH 2369

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
              T   +  V   N  +P FQQ+ Y   + EG
Sbjct: 2370 EATTDLIVRVTDLNDNAPRFQQSAYIATLPEG 2401



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 15/184 (8%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRLPMIPPIQIQAGE 65
           +LDR+     + R+ ++     G A  +   L VN+   D+NDN P       +   A  
Sbjct: 181 SLDRE----ARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASIAEN 236

Query: 66  AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
           A     ++ + ATD+D G N  I YSI    +     FRIDP +G++     L   + E+
Sbjct: 237 ATVGTPVLAVNATDSDAGDNGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKER 296

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTVAT 176
           + + + A D G +  +    +SV V   N   P    +F  +     +SE A     VA 
Sbjct: 297 HELVIVARDRGAQPLEASAFLSVRVTDVNDNQPAITVIFLSDDATPKISESAQPGEFVAR 356

Query: 177 ITVS 180
           I+VS
Sbjct: 357 ISVS 360



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 23/164 (14%)

Query: 44   NDINDNAPRLPMIPPIQIQA--------GEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
            +D+NDN       PPI  Q         G  +   +VK+ A+D D G+N+ I Y I  V 
Sbjct: 2175 SDVNDN-------PPIFTQTQYSATVLEGNVKGDFVVKLSASDADQGMNSRILYHI--VD 2225

Query: 95   NTGLHKFRID-PRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                + F I  P SG++ T   L     E+Y +T+ ATD G         +SV V   N 
Sbjct: 2226 GNPDNAFTISPPYSGIVRTNIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDIND 2285

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEEN 194
              P F +++  ++VSEG ++ + + TIT + + S  A+  +  N
Sbjct: 2286 NQPTFPEHSI-ISVSEGTAVGTVLTTITANDVDSSPALTYRFGN 2328



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 16/164 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +V   +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDN PR P   PI 
Sbjct: 1327 LVVAHSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIMIEDANDNPPRWPQ-DPIT 1383

Query: 61   IQAGEAR---RQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKL 116
            ++  E       +  + A D D G+N ++ YS+     + G   F +D  +G +     L
Sbjct: 1384 VRVSEKAVIGSTVYNLTAIDLDSGLNGDLRYSLVAEFPSRG--SFAVDSLTGALTLARPL 1441

Query: 117  IAGE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
               E  +Y + ++A+D    G + + T+    +V   N   PVF
Sbjct: 1442 DREERAEYMLILKASDRAPPGEQLASTVTARIIVLDQNDNDPVF 1485



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 6/168 (3%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
           VIA +      S   ++ V ++D+NDN P    P+      +        +K++ATD D 
Sbjct: 514 VIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLYNATVSEDMPVGSCFLKVQATDPDC 573

Query: 81  GVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQT 138
           GVNA + Y++    + +  L   R D     + T           I V ATD GG S+  
Sbjct: 574 GVNAMVNYTLAAGRMESEQL-MVRSDTGDICVRTPLDRETAPYLEIPVIATDRGGLSTVA 632

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           IV V V    N   P+F+   Y+V +     I   +  +  + L  G 
Sbjct: 633 IVRVQVT-DVNDNRPIFEPRKYNVTLKSDGPIQGPILRLVATDLDVGL 679



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPR-LPMI 56
            L++S+  LDR+  +  K+  ++ ++ +  T  S+    PV++ + + D+NDN PR L  +
Sbjct: 2539 LILSR-TLDRETKD--KYVLRLGSKNENMTTGSLVGDEPVTVIITVEDVNDNYPRFLEDL 2595

Query: 57   PPIQIQAGEAR-RQIVKIEATDNDLG--VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              + I+   AR   +  + A D+DL   V A + Y I   ++ GL  FR+D  +G ++  
Sbjct: 2596 HQVSIKENAARGTTVAMLRAKDDDLAGSVAANLVYEITSGNDGGL--FRVDKTTGAVQVN 2653

Query: 114  GKL---IAGEQYSITVQATDTGGKS-----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
              L   +  + +++ V A D+   S     ++  + +  V   N  SP F  + Y   V 
Sbjct: 2654 ATLDCDLEPDIHNLVVMACDSDPVSPLCALTRLRIHLEDV---NDNSPKFPVSEYLEFVG 2710

Query: 166  EGASINSTVATITVSRLASG 185
            E   I + V +   S L  G
Sbjct: 2711 ENEPIGTIVFSARASDLDRG 2730



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQA-GEARRQIVKIEATDNDL 80
           VIA ++ G +    V   V + D+NDN P   P    + +++ G  +  I+++ ATD D+
Sbjct: 620 VIATDRGGLSTVAIVR--VQVTDVNDNRPIFEPRKYNVTLKSDGPIQGPILRLVATDLDV 677

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQYSITVQATDTGGKSSQT 138
           G+  ++ Y I + +  G+  F ID  +G ++      L     + + V ATD  G  S  
Sbjct: 678 GLFGQVAYRITNGNEAGV--FHIDRNTGELQVARPSLLSRSPLHQLNVTATDAAGLKSTF 735

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             EV +    P  R    ++  Y + V E    NS V  +
Sbjct: 736 DAEVRITTSSPGHRIASCEKPRYTITVKETVPQNSIVGGV 775



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 15/146 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ 60
            ++ +E LDR           V+A +    AA+   S+ V + D NDN PR          
Sbjct: 1016 ILDRETLDR-------HALTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGFDL 1068

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            ++   +   +  + A+D DLG NA + Y++   +++    F +DP +G I T   L    
Sbjct: 1069 LENLPSGTLVGSVSASDPDLGKNALLRYAVVQANSS----FTVDPDTGEITTKEPLDRET 1124

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV 144
            +  + + ++A D G  S    V + V
Sbjct: 1125 KGVHELVLEARDQGTPSRAARVPLKV 1150



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D NDN+P  R      + +   +    I    A D D G N EI YSI    N
Sbjct: 1672 TLEVLVMDENDNSPEFRPGSCYTLAVPENQGTSVIHTTAAADLDEGKNGEIYYSIVG-GN 1730

Query: 96   TGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             G  KF +D  +G++  +     A  +Y +T+ A D G  S +T   ++V V   N  +P
Sbjct: 1731 IGA-KFILDSITGMLSMSNLDREAVSKYILTISAKDKGRPSLETRCNLTVIVLDVNDNAP 1789

Query: 154  VFQQNTY 160
             F QN Y
Sbjct: 1790 SFVQNQY 1796


>gi|334350360|ref|XP_001374577.2| PREDICTED: protocadherin-11 X-linked [Monodelphis domestica]
          Length = 1256

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
           ++  Q++A +      +   S+ + + D NDNAP     P   I   E      Q+ KI 
Sbjct: 418 EYEVQLLASDAGKPPLNYTTSVVIKIKDENDNAPVFTQ-PTFGISVPENNALGAQLTKIS 476

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
           ATD D G N EITY I   +N G + F +D R+GV+    +L     ++Y+ TV A D G
Sbjct: 477 ATDKDSGKNGEITYLI---ANEGPYPFSLDNRTGVLSAVEQLDRETKDKYTFTVTARDNG 533

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               Q+   V+V V   N  SP F  + Y+  V E    + TV  IT++   +G
Sbjct: 534 EPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPENLPKHGTVGLITITDPDTG 587



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ- 62
           V + N+  D      + F V+A +      S    +T+N+ DINDN P   ++PP     
Sbjct: 611 VIRPNISFDREKQESYTFVVVATDGGRVPRSSTARVTINVVDINDNKPVF-VVPPSNYTF 669

Query: 63  -----AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
                A E    +  + A D D G+N+EI Y I   +   L  F ++  SG I    K I
Sbjct: 670 EFIPLATEIGTLLYVVMAVDEDTGMNSEIRYQIEDGNKKKL--FEMEGSSGNITLKSKFI 727

Query: 118 AGEQ--YSITVQATDTGGKSS 136
             +   + + ++A D G   S
Sbjct: 728 PADTGLHKLLIKARDLGQPDS 748



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 20/156 (12%)

Query: 39  LTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           L V++ D+NDN P      + +  P     G +   + ++ ATD D+G NA I Y    +
Sbjct: 222 LQVSVIDMNDNRPIFKETEIEVTIPENAPVGSS---VYQLHATDADVGANARIQYFFSSL 278

Query: 94  -SNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV----- 144
            SN     F ++  +G+I T  + +  EQ   + + + ATD G   ++ +V V+V     
Sbjct: 279 MSNVAKKLFSLNNTTGLI-TIKEPLDREQAPLHKLMIVATDGGPMPARAMVIVNVTDVND 337

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +P  + R  +       V +SE A++N+ +A +T+
Sbjct: 338 NLPLIDVRY-IIDTTNGTVFLSENAALNTKIALVTL 372



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 26/149 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + D+NDNAP  P  +  I I    A      I  A D D+G+N    Y +    N     
Sbjct: 116 IEDVNDNAPLFPATVINISIPENTAINSRYPIPSAIDPDIGINGIQQYELIKSQNI---- 171

Query: 101 FRIDPRSGVIET----------TGKLIAGEQ---YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET            K++  E+   Y + ++  D G   +SS  I++VSV+
Sbjct: 172 FGLD----VIETPEGEKWPQLIVQKMLDREERDTYVMKLKVEDGGSPPRSSTAILQVSVI 227

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              + R P+F++   +V + E A + S+V
Sbjct: 228 DMNDNR-PIFKETEIEVTIPENAPVGSSV 255



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 21/159 (13%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
           E LDR+  +  K+ F V AR+          ++TV + D NDN+P          +P   
Sbjct: 513 EQLDRETKD--KYTFTVTARDNGEPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPENL 570

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            + G     +  I  TD D G N  IT +I  ++N G   F ID  +GVI         +
Sbjct: 571 PKHG----TVGLITITDPDTGDNGVITLTI--LNNNG--SFIIDAVNGVIRPNISFDREK 622

Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           Q  Y+  V ATD G   +SS   V ++VV   N   PVF
Sbjct: 623 QESYTFVVVATDGGRVPRSSTARVTINVV-DINDNKPVF 660


>gi|149640326|ref|XP_001510246.1| PREDICTED: protocadherin beta-14-like [Ornithorhynchus anatinus]
          Length = 796

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 6/105 (5%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDNAP     P  ++Q  E   +   +  + A D D GVN EI+Y+ +HVS      F
Sbjct: 234 DINDNAPMFTQ-PRFKVQISENSPEGSMVSTVTAQDFDAGVNGEISYTFFHVSEEIRKTF 292

Query: 102 RIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
            I+P+SG I  TGKL     + Y + +QATD GG S +  V V V
Sbjct: 293 EINPKSGEIRVTGKLDFEVTQLYVVDIQATDGGGLSGKCTVLVQV 337


>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
          Length = 4588

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVPVYVKILPPERQLPKFSEPFYSYTVSEDMPIGTEIDLI 2725



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 9/187 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQ 60
            + + E LD +  +  +  F V+ R++          + VN++D ND+AP           
Sbjct: 1514 LYTSEKLDHEAVH--QHTFTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRV 1571

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             ++      ++++ A D D G NAE+ YSI    N G + F IDP  G I+T  +L    
Sbjct: 1572 YESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNIG-NSFMIDPVLGSIKTAKELDRNN 1629

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Q  Y + V+ATD G      I  V + V   +  SP F    Y V +SE  SI S V  +
Sbjct: 1630 QVEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVEISETVSIGSFVGMV 1689

Query: 178  TVSRLAS 184
            T    +S
Sbjct: 1690 TAHSQSS 1696



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ DINDN P           + +     +++++ A   D+  NAEITYSI  +S 
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDIVVGTEVLQVYAASRDIEANAEITYSI--ISG 3272

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V++ V   N  +
Sbjct: 3273 NEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNT 3332

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF Q+TY   +SE A +  +V T+
Sbjct: 3333 PVFSQDTYTTVISEDAVLEQSVITV 3357



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  V + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAV-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G + T+  
Sbjct: 3031 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELRTSTP 3084

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y V V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSVDPYAVTVFE 3136



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+NDNAP   + P      +  E    + + +ATD 
Sbjct: 3093 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSVDPYAVTVFENTEPGTLLTRAQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G   +
Sbjct: 3153 DTGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLLRR 3209

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + T   V  V   N   PVF+   Y   VSE   + + V  +
Sbjct: 3210 LTATGTVVVSVLDINDNPPVFEYREYGATVSEDIVVGTEVLQV 3252



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ +N+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI  V       F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSI--VDGNQGSSFTIDPVRGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +P+F +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPIFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S +    F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2428 SI--LSGSDHKHFVIDSATGIITLSNLRRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2484

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAQDPDLGQSGQVRYSLM---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A I S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPIGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2314 PNRGISYQMFGNLSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2374 VIVTVDVT-DLNDNPPLFEQQIYEARISEHA 2403



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                 SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2894 EMIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 17/138 (12%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQ----TIVEVSVVPGP 148
           T    F ID  +GV++ T  L   +  E Y + ++A D   +  Q     I++VS +   
Sbjct: 863 TDTDAFSIDSVTGVVKITRPLDRELQHEHY-LKIEARDQAREEPQLFSTVILKVS-LEDV 920

Query: 149 NTRSPVFQQNTYDVNVSE 166
           N   P F    Y V V E
Sbjct: 921 NDNPPKFIPPNYRVKVRE 938



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  SPVF Q
Sbjct: 1710 FDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDNSPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIHYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E++     ++ + +TD D G N ++ Y++   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKESQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ V   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETADKYTLNVTVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ YS+  +H       
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYSLKEHH------E 2125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y +TV A D G    S++ IV ++V+   N   PV
Sbjct: 2126 HFQIGPL-GEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHV 2204



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 IRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 2002



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + TV   D      +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 TFTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585


>gi|260828414|ref|XP_002609158.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
 gi|229294513|gb|EEN65168.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
          Length = 2847

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 23/190 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + SK  LDR+  N       V+A ++ G  +   V  TV L D NDN P+  +      Q
Sbjct: 1285 IYSKMALDREDENQRMIIVPVVASDQGGRVSFCNV--TVTLTDKNDNTPQFELA---SYQ 1339

Query: 63   A-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG---LHKFRIDPRSGVIETTG 114
            A      E   +++++ A D D+G N++I YS+Y  S+T    +  F +   +G+I T  
Sbjct: 1340 ANIPTDAEEGAEVIQVNAIDQDIGTNSDIAYSLYDDSDTTAAVVKLFSVHSETGMITTRQ 1399

Query: 115  KLIA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQ---QNTYDVNVSEG 167
            KL    G+ +   VQATD G   ++S   VE+ ++ GP+   P F    Q+ Y   VSE 
Sbjct: 1400 KLTGKEGKAFQFFVQATDGGNPTRTSSAPVEILIL-GPDDIPPYFDPTVQHLY--FVSEE 1456

Query: 168  ASINSTVATI 177
              ++S VAT+
Sbjct: 1457 MPVDSEVATV 1466



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 14/158 (8%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            K G   S    LT+NL D+NDN P+      ++P  +  A      + +++ATD D+G+N
Sbjct: 1838 KDGGGKSCYTELTINLIDVNDNPPKFEKQQYLVPVYENTA--VNTLLTRVQATDPDMGLN 1895

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTI 139
             ++ YS    +N    +F++D  SG++     L   A   +++T++ATD G   +SS + 
Sbjct: 1896 RKVMYSFVDSAN---GQFQVDENSGIVSLAKALDREAQASFNLTIRATDEGAPRRSSTSY 1952

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + +SV+   N   P F+   Y  NVSE   I S +  +
Sbjct: 1953 LIISVL-DINDNPPEFEFAEYAKNVSESTPIGSQIINV 1989



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 19   FRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            FR  V A + + G  A V V +TV   DIND AP    P       +A      ++K+ A
Sbjct: 986  FRLTVRATDSRSGVDAEVVVDITVQ--DINDVAPVFEKPSYEATLSEAAAIGTTVIKVSA 1043

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG 133
            TD D GVN  + Y I    +     F ID  SG+I T   L     E++  TV+ +D G 
Sbjct: 1044 TDLDSGVNQLMYYQILQDESNSTDYFHIDTSSGLILTARNLDHEKIEKHDFTVRVSDGGM 1103

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             S  + V V V V   N  +P F Q +YD  +SE A     V  ++ S
Sbjct: 1104 PSLSSEVHVIVTVLDLNDNAPQFDQPSYDCMISELAPRGHFVTKVSAS 1151



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 13/167 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIE 74
           K+   +  R+K+ T     V + V + DINDNAP    LP    +Q+ A E    +  + 
Sbjct: 780 KYEIVIEVRDKRSTPRVAHVVVFVTIADINDNAPVFVNLPYYSVVQVDA-EPGTPVRTVT 838

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL---IAGEQYSITVQATD 130
           A D D G N+EI YS+    ++G HK FRI+ ++G I     L      ++Y + + A D
Sbjct: 839 AVDKDAGKNSEIRYSL----DSGAHKRFRINRKTGQIMVKQPLEKDDTNKEYHLVIIAED 894

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G       +EV V    N   PVF++  Y V++ E   +++ V  I
Sbjct: 895 KGNPPLSARIEVPVTVM-NKAMPVFEKPFYAVSIPENIQLHTPVINI 940



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 38   SLTVNLNDINDNAPR--LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++++N+ D+NDNAP   +PM      +       ++++ ATD D   NA++TY+I    +
Sbjct: 2145 TVSINVTDVNDNAPEFSMPMYSASISEDAHTGDSVIQVMATDRDSPPNAQVTYTIVRGDS 2204

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG 133
             G  +F I P+ G++  +G L   E   YS+TV+A D+G 
Sbjct: 2205 KG--QFNIAPKLGIVTVSGALDREEIQAYSLTVRAKDSGA 2242



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 9/171 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEA 66
            LDR+      F   + A ++     S    L +++ DINDN P        +   ++   
Sbjct: 1925 LDREAQ--ASFNLTIRATDEGAPRRSSTSYLIISVLDINDNPPEFEFAEYAKNVSESTPI 1982

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              QI+ + A   D+G NAEITY I  +S     KF I   SG I     L   A + Y +
Sbjct: 1983 GSQIINVYAVSKDVGPNAEITYEI--ISGNEHGKFEIGSYSGKITIVNTLDYEASQGYYL 2040

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            TV+A+D G  +   I  VS+ V   N  +P F    Y  ++SE A    +V
Sbjct: 2041 TVKASDGGMPTLSDITTVSINVTDVNDNAPEFSMPMYSASISEDAHTGDSV 2091



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 8/150 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
            A +   ++ +++ D+NDN+P           + +   Q  ++++ A D D G++++ITYS
Sbjct: 1740 AFTAMATVNIDVQDVNDNSPICEQSRYTASISEDITPQTFVMEVLARDPDQGIHSQITYS 1799

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
            +  V   G  KF +D  +GV+ T   L   E   Y++ V A D GGKS  T + ++++  
Sbjct: 1800 LDGV---GADKFLLDKDTGVLMTGAPLDREETPVYTLGVTAKDGGGKSCYTELTINLI-D 1855

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P F++  Y V V E  ++N+ +  +
Sbjct: 1856 VNDNPPKFEKQQYLVPVYENTAVNTLLTRV 1885



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            L+++  NLD +     K  F V   +    + S  V + V + D+NDNAP+   P    +
Sbjct: 1077 LILTARNLDHEKIE--KHDFTVRVSDGGMPSLSSEVHVIVTVLDLNDNAPQFDQPSYDCM 1134

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLI 117
              +       + K+ A+D D   N  + Y+I  VS      F IDP++G++  +   K  
Sbjct: 1135 ISELAPRGHFVTKVSASDADSTDNNRLVYAI--VSGNEQMNFVIDPKTGIVSMSNLRKRE 1192

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                Y++ V  +D G  +S   V V VV   NT SPVF Q  Y V+  E     + V  +
Sbjct: 1193 LDPTYTLNVSVSD-GVFTSSARVAV-VVQSANTHSPVFSQLNYAVSFDENNPRGTYVVMV 1250

Query: 178  TVSRLASG 185
            T +   +G
Sbjct: 1251 TATDEDAG 1258



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 15/157 (9%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVNAEITYSI 90
           V + +N+ D ND+ P    I   Q   G           +V++ ATD D G N+E+TY+I
Sbjct: 5   VRVVINVKDSNDHRP----IFSAQEYTGGVYETAAYGTSVVQVVATDRDRGANSELTYTI 60

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
               N G + F ID   G+I  + +L   A  QY +TV+  D G     + V + + V  
Sbjct: 61  -ETGNVG-NVFSIDETLGIITVSKQLDRSALSQYHLTVKVRDNGNPPLSSTVPIHIGVTI 118

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            N   P F    Y + VSE A + S +  +  +  +S
Sbjct: 119 SNNAPPKFDAKEYAIEVSENARLGSLIVMLGATSRSS 155



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 11/116 (9%)

Query: 90   IYHVSNTG-LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVV 145
            IY +++    ++F ID  +GVI   G L     + + +TV+ATD+  G  ++ +V+++ V
Sbjct: 951  IYSITDGDPFNQFNIDFDTGVINVVGSLDYETKQNFRLTVRATDSRSGVDAEVVVDIT-V 1009

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC------AIMNKEENS 195
               N  +PVF++ +Y+  +SE A+I +TV  ++ + L SG        I+  E NS
Sbjct: 1010 QDINDVAPVFEKPSYEATLSEAAAIGTTVIKVSATDLDSGVNQLMYYQILQDESNS 1065



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           + VSK+ LDR   +      +V        +++VP+ + V    I++NAP         I
Sbjct: 78  ITVSKQ-LDRSALSQYHLTVKVRDNGNPPLSSTVPIHIGVT---ISNNAPPKFDAKEYAI 133

Query: 62  QAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +  E  R    IV + AT       + +TY I   +  G   F ++P SGVI    +L  
Sbjct: 134 EVSENARLGSLIVMLGATSR-----SSVTYEIIGGNTDG--SFDVNPNSGVITCKKQLDY 186

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             Q  Y++TVQAT+    SS   V V +    N   PVF Q+ Y  ++SE A+I S V  
Sbjct: 187 ERQTSYNLTVQATNMVSLSSTATVLVHIA-DENDNPPVFSQSEYIGSISEAATIGSVVLD 245

Query: 177 I 177
           +
Sbjct: 246 V 246



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           + VSK+ LDR   +      +V        +++VP+ + V    I++NAP         I
Sbjct: 353 ITVSKQ-LDRSALSQYHLTVKVRDNGNPPLSSTVPIHIGVT---ISNNAPPKFDAKEYAI 408

Query: 62  QAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +  E  R    IV + AT       + +TY I   +  G   F ++P SGVI    +L  
Sbjct: 409 EVSENARLGSLIVMLGATSR-----SSVTYEIIGGNTDG--SFDVNPNSGVITCKKQLDY 461

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             Q  Y++TVQAT+    SS   V V +    N   PVF Q+ Y  ++SE A+I S V  
Sbjct: 462 ERQTSYNLTVQATNMVSLSSTATVLVHIA-DENDNPPVFSQSEYIGSISEAATIGSVVLD 520

Query: 177 I 177
           +
Sbjct: 521 V 521



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 16/152 (10%)

Query: 39   LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            +++ + D NDN P+    P     P     G +   ++++ A D D G N EI Y     
Sbjct: 1535 VSIQVKDANDNKPKFDSKPYKITLPENASVGTS---VIQVHAFDPDQGANGEIVYGFASD 1591

Query: 94   SNTGLHK--FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVP 146
            SN       F ID  SG + T   L       Y+  V ATD G        T+V V+V  
Sbjct: 1592 SNADEMSDFFTIDSESGWVTTLVPLDREMMSSYAFGVTATDKGEPKQLKDTTLVHVTVA- 1650

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N   P F+ +TY   V E A   + V T++
Sbjct: 1651 DVNDSPPTFRSSTYQGQVREDALPGTIVITVS 1682



 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS----IT 125
            +V + ATD D G   EI+YSI   S      F ID  +G I +   L   ++      + 
Sbjct: 1247 VVMVTATDEDAGAYGEISYSI--ASEKINQLFEIDADTGQIYSKMALDREDENQRMIIVP 1304

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV----SEGASI 170
            V A+D GG+ S   V V++    N  +P F+  +Y  N+     EGA +
Sbjct: 1305 VVASDQGGRVSFCNVTVTLT-DKNDNTPQFELASYQANIPTDAEEGAEV 1352


>gi|410913649|ref|XP_003970301.1| PREDICTED: protocadherin-11 X-linked-like [Takifugu rubripes]
          Length = 1231

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 16/189 (8%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           ++  +++A ++     +    + + + D NDN P  P  P IQ    E      +++K+ 
Sbjct: 431 EYAIKIVASDRGTPPLNTSAMVLIKIKDENDNVPIFPQ-PEIQFSIPENNDPSTELIKLS 489

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
           ATD D G NAEI Y++   +  G   F +D RSG++    +L     E+Y  TV A D G
Sbjct: 490 ATDADSGRNAEIIYTLGPDAPDG---FNVDRRSGILSVGKRLDREKQERYVFTVIAKDNG 546

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------ 185
             S Q+ V +  +V   N  SP F    Y+  V E   +  TV  ITV+   SG      
Sbjct: 547 STSLQSNVTIRLIVQDLNDNSPAFTHPEYNFYVPENLPLFGTVGLITVTDADSGDNAIVT 606

Query: 186 CAIMNKEEN 194
            +I+N ++N
Sbjct: 607 LSILNGKDN 615



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE- 65
           + LDR+     ++ F VIA++   T+    V++ + + D+NDN+P     P       E 
Sbjct: 526 KRLDRE--KQERYVFTVIAKDNGSTSLQSNVTIRLIVQDLNDNSPAFTH-PEYNFYVPEN 582

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                 +  I  TD D G NA +T SI +    G   F IDP++GVI+        +Q  
Sbjct: 583 LPLFGTVGLITVTDADSGDNAIVTLSILN----GKDNFIIDPQTGVIKPNITFDREQQSS 638

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
           Y+  V+A D G   S +  +V++ V   N   PVF
Sbjct: 639 YTFMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVF 673



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 22/193 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           ++ ++NLDR+  +   +  ++   +      S    L V ++D+NDN P      L +  
Sbjct: 201 LIVQQNLDREQKD--TYVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFKDSELEVAV 258

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKL 116
           P     G +   + ++ ATD DLG NA+I ++    +S +    F ID  +G+I T  + 
Sbjct: 259 PENAPMGTS---VAQLHATDADLGSNAQIHFTFSNQISASTKRHFSIDGATGLI-TVKQP 314

Query: 117 IAGEQ---YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           +  E    + + V A+D     S+  V V+V      VP  +TR  +   N   V +SE 
Sbjct: 315 LDRELTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPTIDTRYIINLVNGT-VLLSEN 373

Query: 168 ASINSTVATITVS 180
           A +N+ +A ITV+
Sbjct: 374 APLNTKIALITVT 386



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           V K N+  D      + F V A +     +S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 64  GEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNT-------GLHKFRIDPRSGVI 110
              R        + ++ A DND G+NAE+ YSI             GL  F ID  +G I
Sbjct: 683 DLVRTTTTPGAVVTRVYAIDNDTGMNAELQYSIISSIIITSRVSPRGL--FAIDKSTGNI 740

Query: 111 ETTGKLIAGEQ--YSITVQATDTGGKSS 136
               K++A +Q  + + V+  D G   S
Sbjct: 741 TLQEKIVAADQGLHRLVVKVRDLGQPES 768


>gi|395504920|ref|XP_003756794.1| PREDICTED: protocadherin Fat 2 [Sarcophilus harrisii]
          Length = 4252

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 23/186 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + + +K+ LDR+  +  K+  +V A + +   AS+PV + V   DINDN+P+   I    
Sbjct: 2861 WKISTKKILDRE--HIAKYLLKVTASDGK-FQASIPVEVFVL--DINDNSPQCTQILYSS 2915

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G     I+++ ATD D GVNA++TYS++     G  +F++DP +G + T   
Sbjct: 2916 KVPEDMLPGHF---ILQVTATDLDAGVNAQVTYSLH---GPGADEFKLDPYTGELTTLMP 2969

Query: 116  LIAGEQ--YSITVQATDTGGKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   E+  Y +  +ATD GG+S Q   I+ V  V   N  +P F  N   V V +  ++ 
Sbjct: 2970 LNREEKDVYHLVAKATDGGGRSCQADAIIRVEDV---NDNAPRFFPNHCSVAVFDNTTVK 3026

Query: 172  STVATI 177
            + VA +
Sbjct: 3027 TPVAVV 3032



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 7/147 (4%)

Query: 39   LTVNLNDINDNAPR-LPMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN+ D+ND+ P+ L  +  ++++   A    I+ + ATD D  +N+ ITYS+  V+  
Sbjct: 3204 VVVNITDVNDHPPKFLQDLYSVEVKEDAAVGESILTVSATDGDGPLNSAITYSL--VAGD 3261

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             L  F I P+ G ++    L   E   Y +T++ATD+G  +    VEV V V   N   P
Sbjct: 3262 RLGHFTIHPKKGELQIAKHLDWEETSSYFLTLRATDSGQPALYQDVEVDVQVADVNDNPP 3321

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F Q  Y + V E A + S V  + +S
Sbjct: 3322 RFFQLNYSIVVQENAPLGSRVLELILS 3348



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 11/148 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    +    +  +   A+  ++K+ A+D D G N +++YS+    +
Sbjct: 2153 TVEVQVEDINDNPPIFTQLVYTALVSEGLPAQTPVIKLLASDKDSGRNKDVSYSMVEDES 2212

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPN 149
                 F+ID  +G + T  +L     +Q+ + V+A D G       +  IV VS V   N
Sbjct: 2213 EDSSFFQIDKSTGEMSTAQELDYETQQQFHVKVRAVDNGIPPLSAEALVIVNVSDV---N 2269

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F+Q  Y+ NVSE AS    V  +
Sbjct: 2270 DNPPAFRQPQYEANVSELASCGHLVIKV 2297



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 9/148 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVS 94
            S+ + + D+NDN P     P      +       ++++ A D D GVN E+TYS+ +   
Sbjct: 2679 SVNIQVKDVNDNKPVFEADPYKAFLTENMPVGTTVIQVTANDQDTGVNGEVTYSLAFEQG 2738

Query: 95   NTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGPN 149
            N     F I+  +G I T  +L     E Y   V A+D G     SSQ +VEV++    N
Sbjct: 2739 NAAAELFAINSENGWITTRQELDCEIQETYRFYVVASDHGRTIQLSSQALVEVTIT-DEN 2797

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F  + Y  +V E       V T+
Sbjct: 2798 DNAPQFASDVYKGSVIENGDPGEHVVTL 2825



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A    S+   L D NDN P+       + +
Sbjct: 2433 ITTLQKLDRENATEKFMPIKVMARDGGGKVAFC--SVKTILTDENDNPPQFKASDYTVSV 2490

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  + + G     ++  +GV++    L+  E
Sbjct: 2491 QSNVSKGSPVIQVLAYDADEGANADVTYSVDSMEDLGEEVIEVNSVTGVVKVKESLVGLE 2550

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               ++  ++A D G     + + V +   PN  + P F + +Y  +VSE     S V  +
Sbjct: 2551 NQAFNFKIKAQDGGPPHWDSFIPVRLQVVPNEVTLPKFSEPSYTFSVSEDLPEGSEVGLV 2610



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDN 78
            + ++A+   G   S      + + D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 2978 YHLVAKATDGGGRSCQADAIIRVEDVNDNAPRFFPNHCSVAVFDNTTVKTPVAVVFARDP 3037

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D GVNA+++YS+   ++     F I+  +GVI     L A +Q    +TV+A+D G    
Sbjct: 3038 DEGVNAQVSYSLVGSADG---YFSIEATTGVIRLEKPLRARQQEVLELTVRASDQGTPTP 3094

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV   +   PVF    + V VSE A
Sbjct: 3095 LSTLGTVTVSVVDLADYL-PVFLSTEHSVQVSEDA 3128



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITV 126
            +++++ A D D G N ++ YS+   ++     F IDP  G+I    K  L+  +QY +TV
Sbjct: 1469 ELLQVRALDVDRGFNGQVQYSLQAGNSESF--FNIDPHLGIITVAQKLDLMPQDQYMLTV 1526

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATIT 178
            +A D G      +  V++   P+  S PVF    Y   + E  +I S +  ++
Sbjct: 1527 RAEDQGSPPLHDMATVTIHIHPSDYSAPVFSMAEYFAEIPESVAIGSPLLLVS 1579



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 9/141 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ D+NDN P    +P    IQ G E    + ++ ATD DLG N  ITY+      
Sbjct: 1951 TVKVSIEDVNDNPPEFNHLPYYTAIQDGTEPGDVLFQVSATDLDLGDNGTITYAF----A 2006

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 F IDP  G I         A  +Y++ V A D G  S Q    V V+   N  +P
Sbjct: 2007 EDYVYFWIDPYLGDISLKKPFDYQALNKYTLRVIARDGGNPSLQAEENVLVIVR-NKSNP 2065

Query: 154  VFQQNTYDVNVSEGASINSTV 174
            +FQ   Y V + E  ++ + +
Sbjct: 2066 LFQSLHYKVQIPENIALYTPI 2086



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 11/155 (7%)

Query: 39   LTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            L V L+D+NDN P+ +P +  ++I        ++  +EA D DLG   E+ Y++    + 
Sbjct: 907  LVVTLSDVNDNTPQCIPELSQVKIPEDLPLGTVLTFLEAFDPDLGPGGEVKYTLM---DD 963

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNT 150
                F +DP +G +    +L   ++  Y++++ A+D G    + +   V+V+V+    N 
Sbjct: 964  AQGTFGLDPLTGALSLERELDFEKRTWYNLSLWASDGGKPIARGASCHVQVTVLDVNENL 1023

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              P F    Y   V E +   + V ++T   +  G
Sbjct: 1024 HPPRFASFVYQGQVEENSLPGTLVLSVTAQDVDLG 1058



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
            +F  +V A +      S    + VN++D+NDN P  R P       +       ++K++A
Sbjct: 2240 QFHVKVRAVDNGIPPLSAEALVIVNVSDVNDNPPAFRQPQYEANVSELASCGHLVIKVQA 2299

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGG 133
             D D G    + Y I  +S      F I+  SG+I      +      Y + V A+D   
Sbjct: 2300 LDPDSGDTTRLEYLI--LSGNEDRHFIINRTSGIISMFNFCRKHLDPAYRLRVAASD--- 2354

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               +T V V +     N  SP F+Q+ Y+V ++E A I + V
Sbjct: 2355 GVFRTAVPVYINTTNANKYSPEFRQHIYEVELAENAEIGTKV 2396



 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSIT 125
           ++ + ATD D G N  +TYSI   ++  +  F IDP  GVI +T KL+  E     Y+  
Sbjct: 476 VLTVTATDQDHGENGFVTYSI---TSPRIVPFTIDPYLGVI-STSKLMDYELMQRLYTFR 531

Query: 126 VQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           V ATD G    + S+  + + ++   N   P+F+    +  V     +  TV T++
Sbjct: 532 VWATDWGSPFRRESEVSISL-MLNNLNDNQPMFENANCNGTVPWDLRVGETVVTLS 586



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS--SQTIVEVSVVPGP 148
            VS     KFR+D  +G++   G L    G++Y ++++       S    TIV V++    
Sbjct: 3153 VSGNEQEKFRLDYHTGILYVNGSLDFETGQEYYLSIECIRKSSPSLNDGTIVVVNIT-DV 3211

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P F Q+ Y V V E A++  ++ T++ +
Sbjct: 3212 NDHPPKFLQDLYSVEVKEDAAVGESILTVSAT 3243



 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L    Q  +  TV+ATDT  G  S+  VEV  V   N   P+
Sbjct: 2109 LTLFTADFKTGVLTVTGPLDYESQTKHIFTVRATDTALGSFSEATVEVQ-VEDINDNPPI 2167

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y   VSEG    + V  +  S   SG
Sbjct: 2168 FTQLVYTALVSEGLPAQTPVIKLLASDKDSG 2198



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 15/117 (12%)

Query: 37  VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           VS+++ LN++NDN P           P  ++ GE    +V + A D D  +N  + Y I 
Sbjct: 547 VSISLMLNNLNDNQPMFENANCNGTVPWDLRVGET---VVTLSAIDMDELMN--LRYEI- 600

Query: 92  HVSNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV 145
            VS   L  F ++  SGV+    +   L  G+ YS+ + A+D    +  T + V+VV
Sbjct: 601 -VSGNELEYFDLNHFSGVVSIKRSFKNLPPGQHYSLEITASDGDNYALPTSLNVTVV 656



 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           VI   +Q         + V++ D ND  P L   P  ++   E    +  I  + ATD D
Sbjct: 117 VIQATEQTLGYEASTQVLVHILDQNDLKP-LFSPPSYKVAIPEDTPLKSAICMVSATDAD 175

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG NA+  Y+     N     F + P SGV+  T KL A  +  + + V A D   K S+
Sbjct: 176 LGQNADFYYAF----NARSELFTVHPTSGVVTVTRKLNATWKGRHELQVLAVDRMRKISE 231


>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
 gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
          Length = 5182

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 11/178 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    GK+   V+A +K   A +    L +++ND+ND+ P         + +  A +
Sbjct: 460 LDRE--EIGKYNLTVVAMDKGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELASK 517

Query: 69  --QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +  I ATD D GVNAE+ Y I  +S   L  F +DP +G+I T G L     +   +
Sbjct: 518 GSYVTSITATDGDTGVNAEVHYEI--LSGNELKWFSMDPLTGLIVTAGPLDREVSDSVEL 575

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ A D G   K + T ++V+V+   N  +P F Q+  +V ++E A   + VA +T +
Sbjct: 576 SISARDGGPNPKFAYTQLKVTVL-DENDEAPQFAQSHLNVTLTENAPAQTLVAVLTAT 632



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            +V K++LDR+     K ++++  R   G   +   + T+ ++D NDN P     +    I
Sbjct: 1878 LVLKDSLDRET----KSKYELRIRVSDGIQYTETYA-TIEVSDTNDNPPVFEETVYSFDI 1932

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ +I A D DLG NA+++Y ++  S+     F ++P++G++  T +L   E
Sbjct: 1933 PENAPRGYQVGQILAKDADLGQNAQVSYGVF--SDWATDIFSLNPQTGMLTLTSRLDYEE 1990

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D G  S  T + +   V   N  +P+F   +Y   V E A I   VA++
Sbjct: 1991 VQHYILLVQAQDNGQPSLSTTITIYCNVLDLNDNAPIFDPMSYSSEVFENAPIGKEVASV 2050

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 2051 SAKDIDSG 2058



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 16/180 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMI---- 56
            + +  +LDR+  +   FR  ++AR    +++ V  +  VN+   D+NDNAP   +     
Sbjct: 894  IATATSLDREVQS--HFRLTILAR-SMSSSSFVYGTCGVNIAVIDLNDNAPVFALDRDSE 950

Query: 57   PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            P I +    A  Q V +    D D GVN+ I Y++ H  N    +F I P +GV+     
Sbjct: 951  PTIWLPEDAAVGQEVYLSRVRDRDAGVNSRIRYNLTHNPND---QFHIGPATGVLYLQRP 1007

Query: 116  LIA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            + A  G    + + ATD+G  +  + + +SV +   N  +PVF   +Y+ ++ EG  +N+
Sbjct: 1008 VAAEPGAVLLVELMATDSGHPALSSRLSLSVNIADVNDHTPVFDHTSYETSLLEGTRVNT 1067



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 11/144 (7%)

Query: 41   VNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D + N P   R   + P+  +AG  ++ IV++ ATD  L  + EI YS+  VS   
Sbjct: 3116 INIVDAHKNPPKFERAKYLAPVPEKAGRGQK-IVRVHATDGQLFGSNEIEYSL--VSANL 3172

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
               F I    G I     L +  Q  + + V+ATD G   +  QT V V V  G N  +P
Sbjct: 3173 SSMFTIGTHDGWISLAKSLSSPPQSRFELDVRATDRGAPPQFDQTRVTVEVT-GENLHTP 3231

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F  NTY V V E   + ST+ T+
Sbjct: 3232 KFSANTYQVIVPENEPVGSTILTV 3255



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 17/156 (10%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            LT+N+ D NDNAP +  +I   ++   E+  Q++  ++ATD D G N +++Y +    + 
Sbjct: 2799 LTLNVTDTNDNAPVMERLIYNSEVLEEESPPQLIAVVKATDRDSGDNGKVSYRL---KDD 2855

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-----GKSSQTIVEVSVVPGPN 149
                F I   +G I TT +L   E  +Y++ V+A D G     G SS  +  +      N
Sbjct: 2856 YRGTFEIASDTGEIHTTMRLDREELGEYALVVEAVDQGRPQLTGTSSVLLHLLD----KN 2911

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               P F +  + +NV+E A I S V  +T S L  G
Sbjct: 2912 DNPPKFTR-LFSLNVTENAEIGSFVIRVTSSDLDLG 2946



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 12/146 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            S+ ++L D NDN P+   +  + + +  E    ++++ ++D DLG NA  +YS     N 
Sbjct: 2902 SVLLHLLDKNDNPPKFTRLFSLNVTENAEIGSFVIRVTSSDLDLGPNANASYSF--TENP 2959

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G  KF ID +SG I   G L     E+Y + V+ +D   +++  I     +   N  +P 
Sbjct: 2960 G-GKFSIDAQSGNITVAGHLDREQQEEYILKVEVSDGAWRAATPI--TITIQDQNDNAPE 3016

Query: 155  FQQNTYDVNVSE----GASINSTVAT 176
            F+ + Y  +  E    GA +   +AT
Sbjct: 3017 FEHSFYSFSFPELQHSGALVGQIIAT 3042



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)

Query: 37   VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT+ + D+NDNAP     R  +  P +   G+    +    ATD D   NA + YSI 
Sbjct: 2585 VNLTIQVGDVNDNAPSFDASRYTVTLPDRTSTGDF---VFGALATDLDEAENAMVRYSI- 2640

Query: 92   HVSNTGLHKFRIDPRSGVIET----TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
              S      F I+ R+GV+ T      +  A   +SI V A D G     +  E++V   
Sbjct: 2641 --SGKDQDYFEINARTGVVSTKVVLKNEASAKGTFSIMVHAADRGAYPQHSSAELTVFLR 2698

Query: 148  PNTRSPVFQ--QNTY 160
            P  + P F   +N+Y
Sbjct: 2699 PAEQFPAFAYIENSY 2713



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 21/161 (13%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           + ++  LDR+  +  ++   VIAR++   T  S   ++ +N+ D+NDN P       I  
Sbjct: 667 LTTRRFLDRE--STARYEIPVIARDQGAPTPQSSTATVWLNVADVNDNDPEFYPQHYIYT 724

Query: 62  QAGEAR---------RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              ++R         + ++ + A+D D G NA I YS+    + G   F++D RSG +  
Sbjct: 725 LGDDSRNDGHENGEGKILLHVTASDRDEGDNALIEYSLV---SGGEGLFQLDARSGALRM 781

Query: 113 ---TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPG 147
               G       Y + V A D G   G+ SQ    V +V G
Sbjct: 782 HADVGTTHVKPHYKLQVSARDHGQPAGRKSQRDAVVEIVLG 822



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 32/131 (24%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------------- 51
           +K NLDR+  + G ++  + AR+         + + V + D+NDN P             
Sbjct: 233 TKGNLDRE--SRGSYQLNISARDGGSPPRFGFLQVNVTILDVNDNPPIFDHSDYNVSLNE 290

Query: 52  -RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
             LP  P            +V + A+DNDLG N++ITY +        H+F ++P +GVI
Sbjct: 291 TALPGTP------------VVTVMASDNDLGDNSKITYYLAETE----HQFAVNPETGVI 334

Query: 111 ETTGKLIAGEQ 121
             T ++   +Q
Sbjct: 335 SNTERVNCPQQ 345



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 12/175 (6%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLG 81
             ++ +KQ   +S    +T+ + DIND  P         ++   A   +V  I+A DND G
Sbjct: 2141 FLSHQKQQRLSST-AKVTILIKDINDEVPVFVSANETAVRENVAINTVVLAIKAVDNDEG 2199

Query: 82   VNAEITYSIY-------HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
             N  I Y++          S +    F ++P  G++  T  L       Y + + A D G
Sbjct: 2200 RNGYIDYTLNGASIEDGSASQSEPLPFSLNPTDGLLRVTDALDRELRASYLLNITARDRG 2259

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
                +   ++ V +   N  SP+F    Y  +V+E ASI + V  ++ + +  G 
Sbjct: 2260 EPPQEAETQLLVRILDENDNSPIFDPKQYSASVAENASIGAMVLQVSATDIDEGA 2314



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDND 79
            +++A +    A S  +SL+VN+ D+ND+ P           ++      +   + ATD D
Sbjct: 1019 ELMATDSGHPALSSRLSLSVNIADVNDHTPVFDHTSYETSLLEGTRVNTRFFALPATDMD 1078

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKS 135
               N  I+Y I  +   G   F I P  G +     L     + Y++TV   D G   +S
Sbjct: 1079 TAENGRISYEI--IEGNGERIFGIFP-DGYLFVKALLDREVRDYYALTVSCRDAGEPSRS 1135

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            S+  V + V+   N  +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1136 SEVPVVIHVI-DENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1177



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSI 90
           + P+ + + + DINDN+P  P  P I +   E+     ++    ATD D G N  +T   
Sbjct: 146 TYPIEVRIKVLDINDNSPEFPE-PSIAVSFSESAMSGTRLLLDAATDADSGENG-VTDQY 203

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ET G L    +  Y + + A D G       +
Sbjct: 204 EIVAGNVDNKFRLATTTNPSGDTSYLHLETKGNLDRESRGSYQLNISARDGGSPPRFGFL 263

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y+V+++E A   + V T+  S
Sbjct: 264 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 304



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 46/204 (22%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            YL V K  LDR+  +   +   V  R+    + S  V + +++ D NDNAP+        
Sbjct: 1105 YLFV-KALLDREVRD--YYALTVSCRDAGEPSRSSEVPVVIHVIDENDNAPQFTNSTFTF 1161

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT- 113
             IP    +   A   + K+ A D D+G NAE+++    V  +    F ID R+G I+T  
Sbjct: 1162 SIP----ENAPADTFVGKLTALDRDIGRNAELSF----VLTSHTQDFTIDIRNGFIKTLR 1213

Query: 114  ----------------GKLIAGEQYS---------ITVQAT--DTGGKSSQTIVEVSV-V 145
                            G++   E+ S         + ++AT  D G       V+V V +
Sbjct: 1214 PFDREALVRDSRGTAEGEVGGDERASRISSIEGNYMILEATVSDNGSPRLSDKVKVKVII 1273

Query: 146  PGPNTRSPVFQQNTYDVNVSEGAS 169
               N  +PVF +  Y V +SEGAS
Sbjct: 1274 TDVNDNAPVFLRAPYHVTISEGAS 1297



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 37   VSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V + V + D+NDNAP   R P    I   A E    I  +   D D G+N ++ YS+   
Sbjct: 1267 VKVKVIITDVNDNAPVFLRAPYHVTISEGASEG-THITHVFTQDADEGLNGDVYYSLAGG 1325

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
            +  G  +F +D  +G +    +L   + E + + V A D   K   S+ T + + VV   
Sbjct: 1326 NEAG--QFSLDGATGQLTLARRLDRESQEAHHLVVVARDAALKDSLSANTTITI-VVLDE 1382

Query: 149  NTRSPVFQQNTYDVNVSE 166
            N  +P F Q++ +V+V E
Sbjct: 1383 NDNAPEFTQSSSEVSVLE 1400



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++          L V + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2249 YLLNITARDRGEPPQEAETQLLVRILDENDNSP---IFDPKQYSASVAENASIGAMVLQV 2305

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             ATD D G N  I +SI  V     H F I   +GV+     L      +Y++TV+A D 
Sbjct: 2306 SATDIDEGANGRIRFSI--VMGDLNHDFTISEDTGVVRVAKNLNFERLSRYTLTVKAEDC 2363

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                 +S T     ++   N   P F  + Y   V E
Sbjct: 2364 DLENPASDTAELTIIILDINDNRPTFLDSPYLARVME 2400



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 10/170 (5%)

Query: 23   VIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDND 79
            V+AR+     + S   ++T+ + D NDNAP           ++      ++++  A+D D
Sbjct: 1358 VVARDAALKDSLSANTTITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDAD 1417

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK-S 135
             GVN+++ +SI   +      F ID  +G +    K++  E    Y++ + A+D G    
Sbjct: 1418 QGVNSQVVFSI--SAGNRRDTFHIDTNTGSL-YLHKMLDYEDITSYALNITASDCGTPLL 1474

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            S T++   VV   N   P+F        + EG  + + + T+      SG
Sbjct: 1475 STTVLYNVVVVDANDNPPIFPSTAIVRQIKEGIGLKTPIVTVLADDPDSG 1524



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQ 127
            I+ + ATD D+G N  + Y+I       L KF +D R+G  VI         ++Y + + 
Sbjct: 3252 ILTVGATDADVGPNGMLRYAI--SGGNELRKFSVDERTGGIVIRQPLDFDTTQEYHLNIT 3309

Query: 128  ATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              D G +    +  ++++    N   PVF Q  Y   ++E   I + V
Sbjct: 3310 VQDLGFQPLSAVAMLTIILTDVNDNPPVFAQKEYHGYLAENKPIGTFV 3357



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 41   VNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN P   L     +  +   A   ++   ATD D G+NA + +++       +
Sbjct: 2484 VEVQDMNDNGPVFELQSYHAVVEENLPAGTLVLHPTATDKDEGLNARLRFNLL---GDHI 2540

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-----GKSSQTIVEVSVVPGPNTR 151
             +F ID ++G+I T+  L   E   Y +T+ A D+        S    ++V  V   N  
Sbjct: 2541 MRFHIDSQTGIITTSMPLDREETAVYHLTLMAQDSSVTEPRASSVNLTIQVGDV---NDN 2597

Query: 152  SPVFQQNTYDVNVSEGASINSTV 174
            +P F  + Y V + +  S    V
Sbjct: 2598 APSFDASRYTVTLPDRTSTGDFV 2620



 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 19/193 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V ++ LD D     ++   +  ++      S    LT+ L D+NDN    P+    +  
Sbjct: 3290 IVIRQPLDFDTTQ--EYHLNITVQDLGFQPLSAVAMLTIILTDVNDNP---PVFAQKEYH 3344

Query: 63   AGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
               A  +     + +  ATD D   NA I YS +  + T  H F ++  +G I +     
Sbjct: 3345 GYLAENKPIGTFVFQAVATDKDSPRNAIIHYS-FLPTGTDRHFFSVNSSTGSIFSAVSFD 3403

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-----VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              E+ + T+Q      K+  TI+E        + G N   P F Q  +  +VSE +++ +
Sbjct: 3404 YEERRTYTLQLK---AKNPDTIMESYATLFIHILGVNEFYPHFVQPVFHFDVSETSAMGT 3460

Query: 173  TVATITVSRLASG 185
             V  +  +   SG
Sbjct: 3461 HVGAVQATDKDSG 3473



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)

Query: 45   DINDNAPRLPMIPPI-QIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSN--TGLHK 100
            D NDN P  P    + QI+ G   +  IV + A D D G+N +++Y+I       +G   
Sbjct: 1486 DANDNPPIFPSTAIVRQIKEGIGLKTPIVTVLADDPDSGLNGKVSYAISKQEPELSGGRH 1545

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-----SQTIVEVSVVPGPNTRSP 153
            F I+  +GVI T   +   A + + +TV ATD    S     ++ +V V +V   N  +P
Sbjct: 1546 FGINTETGVIYTLRDIDREAIDTFRLTVVATDRAQPSDLQLHAEKLVTV-IVEDINDNAP 1604

Query: 154  VF 155
            VF
Sbjct: 1605 VF 1606


>gi|41281609|ref|NP_446392.1| protocadherin alpha-11 precursor [Rattus norvegicus]
 gi|40645540|dbj|BAD06377.1| cadherin-related neuronal receptor 12 [Rattus norvegicus]
 gi|50512322|gb|AAT77556.1| protocadherin alpha 12 [Rattus norvegicus]
 gi|149017278|gb|EDL76329.1| rCG49388, isoform CRA_b [Rattus norvegicus]
          Length = 950

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V++ D+NDN P    +   +++    A+  +V K+ ATD D GVN ++ YS+  + 
Sbjct: 226 VQLWVHVLDVNDNDPVFDHLEYKVRVMENAAKETLVIKLNATDLDEGVNGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
            TG H F +D  SG +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDENSGELRVNGTLDYEENKSYEIEVLATDKGAPPMVGHCVVFVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I++S L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISISDLDSG 379



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 41  VNLNDINDNAPRLPMIPP-IQIQAGEARRQIVKIE-ATDNDLGVNAEITYSI----YHVS 94
           V + DINDN P  P+    + I   +       +E A+D D+G NA + Y +    Y   
Sbjct: 121 VEVRDINDNPPMFPLREQRLLIYESKQPDSRFPLEGASDADIGENAVLVYRLSQNEYFSL 180

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            +  +  +I   S +++ T       + ++ + ATD G       V++ V V   N   P
Sbjct: 181 ESSTNSKQIKRPSLILKKTLDREKTRELNLLLTATDGGKPELTGTVQLWVHVLDVNDNDP 240

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF    Y V V E A+  + V  +  + L  G
Sbjct: 241 VFDHLEYKVRVMENAAKETLVIKLNATDLDEG 272



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV A++    A    V+L V + D NDNAP L  +P   +  G    ++V       
Sbjct: 530 LQFQVSAQDAGVPALGSNVTLQVFVLDENDNAPML--LPHGAVGPGGTVSELVPRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYELQLGTGGVRSPFRVGLYTGEISTTRAL 636


>gi|291240680|ref|XP_002740246.1| PREDICTED: Pf1-cadherin-like [Saccoglossus kowalevskii]
          Length = 1962

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 17/186 (9%)

Query: 5   SKENLDRDPPNPGK---FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-- 59
           +++ LDR+    GK    +FQVIAR   GT +   V + VN+ D+NDNAP+ P  P +  
Sbjct: 513 TRQPLDREEEGDGKGQVRQFQVIARNSYGTTS---VDVLVNVEDVNDNAPKFPYSPYVGH 569

Query: 60  ---QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTG 114
                  GE+   I  ++  D ++  NA++ YSI   S T   +  F I+  + +I+T  
Sbjct: 570 FEEHTGPGESVMTIDAVDLDDPNVDRNAKLVYSIVTNSLTPESRNIFTINSDTALIKTNV 629

Query: 115 KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             +  E    Y ITVQA D  G S  T+     V   N  +P F Q  Y   VSE  +++
Sbjct: 630 GNLDRETTPVYFITVQAIDGYGLSG-TVTATIYVDDINDNAPEFPQEQYYTTVSENLAVD 688

Query: 172 STVATI 177
           S+V ++
Sbjct: 689 SSVYSV 694



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 23/127 (18%)

Query: 31  TAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLG 81
           ++ SV   LT+++ D+NDNAP          +P + P       A  Q+V+++A+D D G
Sbjct: 195 SSESVTSELTISIMDVNDNAPIFDREFYEVTIPEVSP-------ADAQVVQVQASDADAG 247

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTI 139
            NA ITY     ++     F + P +G +   G L   E Y+ TV A D G     S T 
Sbjct: 248 ENARITYQ----TDNNDMTFSVHPDTGSVIIGGPLHPKE-YAFTVFAHDHGDPWLESTTT 302

Query: 140 VEVSVVP 146
           V ++V P
Sbjct: 303 VYITVTP 309


>gi|301608215|ref|XP_002933686.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
           tropicalis]
          Length = 808

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 17/143 (11%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
           +IN+NAP   ++              +++ ATD D G N EITYS  H+    LH FRID
Sbjct: 252 NINENAPNGSLV--------------LQLHATDEDDGSNGEITYSFSHIPENALHIFRID 297

Query: 105 PRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
            ++G +   G+L     ++Y++TV+A D G   S   V + V+   N  +P  Q N++  
Sbjct: 298 SQTGELSKVGELDYEVTKKYTLTVEAKDGGELVSHCKVSIQVIDA-NDNAPEIQINSFLG 356

Query: 163 NVSEGASINSTVATITVSRLASG 185
            V E +   + +A I V  L SG
Sbjct: 357 TVPEDSPPETVIAIIYVHDLDSG 379



 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V+   +DR+     ++   + A++K   + S   ++ V L D+NDN P       + 
Sbjct: 404 YKLVTLSRMDRE--RTSEYNISITAKDKGTPSLSSLKTIRVALTDVNDNIPVFEKTHYVT 461

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              +  +    I+ + A D D+  N  ITYS   V +T +    I     +   TG + A
Sbjct: 462 YVPENNQPGMSILHVNALDFDINDNGFITYS---VISTAIQNIPISSHVSINSATGVIYA 518

Query: 119 GE--------QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSP 153
                     ++   V ATD G    SS + + V ++   N  SP
Sbjct: 519 LHAFDYEQIREFQFQVMATDNGSPSLSSNSTIRVCII-DKNDNSP 562


>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
            carolinensis]
          Length = 4585

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 7/144 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L V++ DINDN P            +   A  +I+++ A   D+  NAEITYSI  +S  
Sbjct: 3215 LVVSVLDINDNPPVFEYREYSATVSEDAVAGIEILQVYAASRDIEANAEITYSI--ISGN 3272

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               KF ID ++G I   G L   +  +Y +TV+ATD G  S   +V V++ V   N  +P
Sbjct: 3273 EHGKFSIDSKTGAIFIIGGLDYESSPEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTP 3332

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q+TY   +SE A +  +V T+
Sbjct: 3333 VFSQDTYTAVISEDAEVEQSVVTV 3356



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A    S+ V L D+NDNAP        + I
Sbjct: 2549 IFTSEKLDRETPAEKVIFIRLMAKDSGGKVAFC--SVNVILTDVNDNAPLFRATEYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +   R   ++K+ A+D D G NA+ITY++   S +      I+  +GVI T   LI   
Sbjct: 2607 SSDVPRGTSVIKVLASDADEGTNADITYTMEADSPSVQENLEINHLTGVITTKESLIGLE 2666

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E  +  V+ATD G    ++ V + V +  P    P F +  Y   +SE   I + + TI
Sbjct: 2667 NEFLAFFVRATDGGSPQKESRVPLYVRILSPEIHIPKFSEPFYSYTLSEDIPIGTEIDTI 2726



 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 20/197 (10%)

Query: 1    YLVVSKEN----LDR--DPPNPGKFRFQVIA---REKQGTAASVPVSLTVNLNDINDNAP 51
            Y V+ ++N    L++  D      ++F V+A    E     +SV +S  + + D+NDN P
Sbjct: 2751 YFVIDRQNGKLKLEKSLDHETTKWYQFSVLAYYVNEDYKVVSSVDIS--IQIRDVNDNKP 2808

Query: 52   RLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSG 108
             +   P     ++   A  ++++I+ATD D G N ++TY +Y   +  + + F I+  +G
Sbjct: 2809 VIESNPYKAFIVENMPAGTRVIQIKATDQDSGSNGQVTYRLYPAQDADISESFAINAETG 2868

Query: 109  VIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
             I T  +L   +Q  Y ITV A+D G K   +S  +VEVSV    N   P F    Y   
Sbjct: 2869 WITTLKELDHEKQNKYKITVVASDRGEKVQLTSTAVVEVSVT-DVNDNPPRFTAEIYKGT 2927

Query: 164  VSEGASINSTVATITVS 180
            VSE       VA ++ +
Sbjct: 2928 VSEDDPTGGVVAILSTT 2944



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 9/143 (6%)

Query: 41   VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +N++D ND+AP            ++      ++++ A D D G NAEI YSI    NTG 
Sbjct: 1551 INVSDTNDHAPWFTSSSYKGRVFESAAVGSMVLQVTALDKDKGENAEIVYSI-ESGNTG- 1608

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV 154
            + F I P  G I T  +L   + E+Y++ V+ATD G    S  T V +SV    N  SP 
Sbjct: 1609 NAFNIHPILGSITTAKELDQSSQEEYTLMVRATDKGSPPMSEVTSVHISVTISDNA-SPK 1667

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F    Y   + EG SI S V  +
Sbjct: 1668 FTMREYSTEIGEGCSIGSFVGMV 1690



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         +LP     + +    R  I ++ A D D G NAEI+YSI 
Sbjct: 1234 VKILDENDNRPQFLQKFYQIKLPEREKPERERTAKREPIYRVVAADKDEGPNAEISYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPN 149
                 G  KF IDP +G++ +     AGE   +T++A D G   KSS   + +  +P P+
Sbjct: 1294 EGDEHG--KFFIDPITGIVSSKKYSGAGEYDILTIKAVDNGRPQKSSTARLHIEWIPKPS 1351

Query: 150  -TRSPV-FQQNTYDVNVSEGASINSTVATITV 179
             T  P+ F+++ +   V E   +   +  I V
Sbjct: 1352 PTSEPISFEESFFSFTVMESDPVTHMIGVIAV 1383



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 29/182 (15%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+  +      +V A  +    A V V +TV   DINDNAP    LP    ++I   E
Sbjct: 2040 FDRELQDSFDIVVEVTAEHQPSLIAHVVVKVTVE--DINDNAPVFVSLPYYATVKIDM-E 2096

Query: 66   ARRQIVKIEATDNDLGVNAEITYSI------YHVSNTGLHKFR--IDPRSGVIETTGKLI 117
              + I ++ A D D+G N E+ YS+      + + NTG    +   DP +          
Sbjct: 2097 VGQVIRRVTAVDKDIGRNGEVHYSLKEDYGHFQIGNTGEISLKKPFDPDT---------- 2146

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              E+Y ITV ATD G    S++    ++VV   N   PVF++  Y   + E   I+S V 
Sbjct: 2147 LNEEYIITVVATDGGQPAFSAEVTFPITVV---NKAMPVFEKAFYSAEIPENIQIHSPVV 2203

Query: 176  TI 177
             +
Sbjct: 2204 HV 2205



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+      +   V A ++     S  V + + + D+NDNAP+   P+  P  ++    
Sbjct: 1098 LDRE--TTSHYWLTVYAADQGVVPLSSFVEIYIEVGDVNDNAPQTTQPVYYPEVMENSPK 1155

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--- 123
               +++IEA D D   N ++TY I   +  G   F ++P++G+I TT + +  EQ S   
Sbjct: 1156 DVSVIQIEAFDADSTANDKLTYKITSGNPQGF--FSMNPKTGLITTTSRKLDREQQSEHI 1213

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G     T+  V V +   N   P F Q  Y + + E
Sbjct: 1214 LEVTVTDNGIPPKSTLARVIVKILDENDNRPQFLQKFYQIKLPE 1257



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 15/153 (9%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ +N+ DINDN P         +  +  E  + +V + A D+D  +N+ I YSI  + 
Sbjct: 3318 VTVNINVTDINDNTPVFSQDTYTAVISEDAEVEQSVVTVMAADSDGPLNSHIRYSI--ID 3375

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG---GKSSQTI-VEVSVVPG 147
                ++F IDP  G ++   KL+  E+   Y++TVQA+D G   G ++ T+ ++VS V  
Sbjct: 3376 GNQENQFTIDPTLGEVK-VAKLLDREKISGYTLTVQASDNGNPPGINTTTVNIDVSDV-- 3432

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N   PVF +  Y + + E   +   +  + V+
Sbjct: 3433 -NDNPPVFSKGNYSIIIQENKPVGFNIQQLEVT 3464



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P            +A      +V++ ATD D G N  I+Y
Sbjct: 2262 TGAHAEVFVDIVIEDINDNPPLFTEQFYTATLSEAAVIGTSVVRVWATDADSGTNRGISY 2321

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSV 144
             +   ++     F ID  +G+I  +  L   +  Q+++ V+A D+G    SS  +V V +
Sbjct: 2322 HLVENNSNSHEYFHIDSSTGIILISRSLDYEQSRQHTLLVRAIDSGMPPLSSDVVVTVGI 2381

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                N   PVF Q  Y+ N+SE A     V  +  S
Sbjct: 2382 T-DLNDNPPVFNQLLYEANISELAPRGHFVTCVKAS 2416



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 11/179 (6%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEA 66
            +LDR+  +    + +   + K+ +  S  V L V+L D+NDN P+ +P+   ++I+    
Sbjct: 883  SLDREAQSVHFLKIEARDQAKEESQLSSTVLLKVSLEDVNDNPPKFIPLNYRVKIREDLP 942

Query: 67   RRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYS 123
               I+  +EA D D+G ++++ YS+    + G   F +D  SG I     L     + Y+
Sbjct: 943  EGTIITWLEAYDPDVGQSSQVRYSLL---DGGEGSFDVDKLSGAIRIVQGLDFERKQMYN 999

Query: 124  ITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +TV+A D G     SS   VE+ VV    N   P F        V+E   I S V T++
Sbjct: 1000 LTVRAKDKGKPISMSSTCYVEIEVVDVNENLHPPRFPNFVDKGFVNEDVPIGSLVMTVS 1058



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SGVI T+ K +  E    YS+T+Q T+  G+S+ T + V +    N  
Sbjct: 1706 NTG-DVFTINPNSGVI-TSQKTLDFETLSFYSLTIQGTNMAGQSANTTLLVHL-QDKNDN 1762

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +P F Q  Y  ++SE AS NS V T
Sbjct: 1763 APTFMQTEYTGHISESASANSVVLT 1787



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D NDN+P    +   +    +A   + I++I ATD D+  NAEITY++      G 
Sbjct: 3012 VKVLDSNDNSPVCEKMLYTETIPEDAPPGKLIMQILATDADIRSNAEITYTL---QGAGA 3068

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              F + P +G ++T   L   ++  Y+  V+A+D GG+  Q  + ++ +   N   P F 
Sbjct: 3069 EDFSLSPDTGELKTLAALDREQKSVYTFMVKASDGGGRFCQANIILN-IEDVNDNIPEFT 3127

Query: 157  QNTYDVNVSE 166
             + Y + V E
Sbjct: 3128 TDPYTITVFE 3137



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     +   E +    +I+++EA D DLG N E+ YSI     
Sbjct: 809 LDIRVLDANDNHPEF-LQDSYFVDVSENKDLDTEIIQVEAIDRDLGTNGEVRYSIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ---TIVEVSVVPGPNT 150
           T   KF ID  +G+++  G L    Q  + + ++A D   + SQ   T++    +   N 
Sbjct: 864 TDTDKFSIDSVTGIVKVIGSLDREAQSVHFLKIEARDQAKEESQLSSTVLLKVSLEDVND 923

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V + E
Sbjct: 924 NPPKFIPLNYRVKIRE 939



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 125 EKNTNAEARTKIRVQVLDTNDLRPLFSPTSYSVSVPENTAIRTSIARVSATDADIGTNGE 184

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             YS    ++     F I P SGVI  TG+L   E   Y + + A D G K
Sbjct: 185 FYYSFKERTDM----FAIHPTSGVIVLTGRLDYSESKVYEMEILAVDRGMK 231



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV + D+NDN P    ++    I     R   V  ++A+D D     ++ YSI  ++
Sbjct: 2375 VVVTVGITDLNDNPPVFNQLLYEANISELAPRGHFVTCVKASDADTSDVGKLEYSI--LT 2432

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F I+ ++G+I  +   K      Y + V  +D   +S   ++ ++V+ G N  S
Sbjct: 2433 GNDHMNFVINSKTGIITLSNVHKQTLKPVYRLNVSVSDGVFRSPAQVL-INVI-GANLHS 2490

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P+F Q  Y+V +SE A +++ V  +  +   +G
Sbjct: 2491 PLFSQKEYEVELSENAPLHTLVTEVRATDKDTG 2523



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 26/169 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRLPMIP-- 57
           ++ + EN+D +   P  ++ +V A +  GT     V   +T+ LN++NDN P    I   
Sbjct: 519 VISTSENMDYEL-MPRVYKLRVRASD-WGTPYRREVEAPVTIVLNNLNDNTPLFEKINCE 576

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV-SNTGLHKFRIDPRSGVIETT 113
              P ++  GE   QI  + A D D     E+    Y V S   LH F ++P SGV+   
Sbjct: 577 GTIPRELGVGE---QITTVSAIDAD-----ELQLVQYQVESGNELHLFVLNPNSGVLSLK 628

Query: 114 GKLIAG-----EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
             L+ G       +S+ + ATD    SS   + ++VV    +R PV  Q
Sbjct: 629 QSLVDGLGAKTSFHSLRITATDGENFSSPLYINITVVA---SRKPVKLQ 674



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  N  +F  QV         A    ++T+ + DIND  P     +     +    
Sbjct: 1835 SLDYEERNTFRFSVQVSDMGTPRLFAEYAANVTIRVIDINDCPPVFSKDLYEATVLVPTY 1894

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               ++V + ATD D    + + YSI    N G  KF ID ++G I          +Y +T
Sbjct: 1895 KGVKVVMVNATDADSETFSRLMYSITE-GNIG-EKFSIDSKTGQITVQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  SS T ++++V     ++   F  ++Y   V E ++   T+A IT
Sbjct: 1953 VRASD-GRFSSITYIKINVKESKASQLK-FTHSSYSAVVQENSTKPKTIAVIT 2003



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S P     + + +N +AP+     P  I+  E       I  I ATD D G N ++ Y+I
Sbjct: 698 SEPEDTFFDTHSVNFHAPQFSASLPNSIEIKEDLLVGSNIQLINATDLDTGFNGKLVYAI 757

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVP 146
              +N     F I   +G+++    L     ++Y++     D G   KS+  ++++ V+ 
Sbjct: 758 SGGNNDS--SFVIGMETGMLKILSPLDREVKDKYTLNFTVYDLGIPQKSAWRLLDIRVLD 815

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTV 174
             N   P F Q++Y V+VSE   +++ +
Sbjct: 816 A-NDNHPEFLQDSYFVDVSENKDLDTEI 842



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEA 66
            LDR+     K  +  + +   G       ++ +N+ D+NDN P     P      +  E 
Sbjct: 3086 LDREQ----KSVYTFMVKASDGGGRFCQANIILNIEDVNDNIPEFTTDPYTITVFENTEP 3141

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  + +++ATD D G+      S+  VS     +F I+  SG+ +    L    Q  YS+
Sbjct: 3142 KTLLTRVQATDADAGL---FRNSLSLVSQQW--QFSINELSGMXQLEKALDRELQPVYSL 3196

Query: 125  TVQAT--DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            T++    D+  + S T + V  V   N   PVF+   Y   VSE A
Sbjct: 3197 TLKGKMKDSPRRLSSTGILVVSVLDINDNPPVFEYREYSATVSEDA 3242



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + ++ ATD D G    +TY I  V++    +F  + R G I T+ KL     A +   I 
Sbjct: 2512 VTEVRATDKDTGHYGAVTYHI--VNDFAQDRFYTNER-GQIFTSEKLDRETPAEKVIFIR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D+GGK +   V V ++   N  +P+F+   Y+VN+S      ++V  +  S    G
Sbjct: 2569 LMAKDSGGKVAFCSVNV-ILTDVNDNAPLFRATEYEVNISSDVPRGTSVIKVLASDADEG 2627



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 12/95 (12%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++ + A D D G + E+ YSI   S  G+  F ID   G I TT  L+  E    Y +TV
Sbjct: 1054 VMTVSAFDEDTGRDGEVRYSIRDGSGVGI--FTIDEEKGTI-TTVDLLDRETTSHYWLTV 1110

Query: 127  QATDTGGKSSQTIVEVSVVPG------PNTRSPVF 155
             A D G     + VE+ +  G      P T  PV+
Sbjct: 1111 YAADQGVVPLSSFVEIYIEVGDVNDNAPQTTQPVY 1145



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSIT 125
            +I+++ A+D D     ++ Y++   V    L KF +DP +G + T+ KL      Q+ +T
Sbjct: 1475 EILQVSASDKD--EKNKLIYTMQSSVDPVSLKKFHLDPATGSLYTSEKLDHEVIHQHVLT 1532

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      +    V + V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1533 VMVRDQDVPVKRNFARVIINVSDTNDHAPWFTSSSYKGRVFESAAVGSMVLQVT 1586


>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
          Length = 4403

 Score = 69.3 bits (168), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  +V+A + +  A +    + + + DINDN+P    I    
Sbjct: 2971 WTISSKKPLDRE--DTEKYLLKVMASDGKFQATT---EVEIFVLDINDNSPECGQIFYTG 3025

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              + +A+    I+KI ATD D+G NA+ITYS++     G  +FR+ P +G + T+  L  
Sbjct: 3026 RVSEDAQPGHFILKISATDPDVGSNAQITYSLH---GPGAEEFRLGPHTGELTTSAPLDR 3082

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             ++  Y +  +ATD GG+S Q  + ++ +   N  +P F  +   V V +  +  + +A 
Sbjct: 3083 EQKPTYHLVAKATDGGGRSCQADITLT-IEDTNDNAPRFFPSHCAVAVFDNTTTKTPIAV 3141

Query: 177  ITVSRLASG 185
            ++   L  G
Sbjct: 3142 VSARDLDEG 3150



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 14/162 (8%)

Query: 28   KQGTAASVPVSLTV-NLNDINDNAPRL---PMIPPIQIQA--GEARRQIVKIEATDNDLG 81
            ++G+A+   V++ V N+ DIND+AP     P    I+  A  GE    I+ + A D D  
Sbjct: 3304 RKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEI---ILTVSADDLDGA 3360

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTI 139
            +N +ITYSI  V    L  F I P+SG I     L   E   YS+TV+ATD G  +  + 
Sbjct: 3361 MNNQITYSI--VEGNPLGHFAIQPKSGQISIAKHLDREEISSYSLTVRATDNGHPAQFSD 3418

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V V V V   N   P F Q  Y V V E A + ++V  + +S
Sbjct: 3419 VAVRVHVSDVNDNPPRFFQLNYSVVVQENAPVGTSVLELIMS 3460



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 9/168 (5%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++  V+A    Q T     VS+ + + DINDN P     P     ++   +   ++++ A
Sbjct: 2770 YQIDVMAHCSHQETELVSLVSVNIQVQDINDNKPVFEADPYKAFVMENMPSGTTVIQVTA 2829

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D G + ++TYS+   S      F ID  +G I T  +L     E Y   V ATD G 
Sbjct: 2830 NDQDTGSDGQVTYSLEAESGKLRGLFTIDGETGWITTLKELDCETQETYRFYVVATDHGR 2889

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            K   SSQT+VEV+ V   N  +P F  + Y  +V E A     + T++
Sbjct: 2890 KVQLSSQTLVEVT-VSDENDNAPQFTSDFYKGSVIENAEPGQVIVTLS 2936



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + + + D NDN P  P    M+   + +A E    + ++ A+D D G N+++TY+I    
Sbjct: 1231 VVIQVLDANDNPPSFPHKLFMVQLPEREASETPLPVYRLIASDRDQGQNSQVTYTIEE-E 1289

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV--PGPNT 150
              G+  F I+P +G++ +     A E   +TV+ATD G    SS   + +S V  PGP++
Sbjct: 1290 EEGI--FTINPTTGMVLSRKAFPASEYNILTVKATDGGSPPLSSHVRLHISWVVRPGPSS 1347

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITV 179
                F +  ++  V E   +N  V  I++
Sbjct: 1348 EPLAFDEPHFNFAVMETDPVNHMVGVISI 1376



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 15/177 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR 67
            LDR+     K  + ++A+   G   S    +T+ + D NDNAPR  P    + +      
Sbjct: 3080 LDRE----QKPTYHLVAKATDGGGRSCQADITLTIEDTNDNAPRFFPSHCAVAVFDNTTT 3135

Query: 68   RQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  I  + A D D G+NAE+ YS+   S++    F I+  +GVI     L   +   + +
Sbjct: 3136 KTPIAVVSARDLDEGLNAEVVYSL---SDSANGHFSIEETTGVIRLEKPLKDSQHSAFEL 3192

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            TV ATD G     S+   V VSVV   N   PVF    Y   V E  ++ + V  ++
Sbjct: 3193 TVCATDQGTPQPLSALGTVTVSVV-DLNEYLPVFLAPEYVAMVKEDVAVGTEVLNLS 3248



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 16/165 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVK 72
            +FR +V A +      S    + VN+ DINDN P    +   Q +A  +        ++K
Sbjct: 2351 QFRMKVRAADHGTPPLSSDALVIVNVTDINDNPPEFSQL---QYEAKVSEMATCGHIVLK 2407

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++A D D G    + Y I  +S      F I+  SG+I    +     +  YS+ V A+D
Sbjct: 2408 VQALDPDSGDTTRLEYVI--LSGNDHRHFTINSTSGIISMFNRCKKDLESSYSLRVSASD 2465

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               KS+   V V +     N  SP FQQNTY+  ++E A + + V
Sbjct: 2466 GVFKST---VPVYINTTNANKYSPSFQQNTYEAELAENAEVGTKV 2507



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 9/109 (8%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +IV++ A D D G NAEI YS+   +  G   F IDP SG+I    KL   +Q  +++ V
Sbjct: 1580 EIVQVRALDQDQGANAEIHYSLQAGNGEGF--FSIDPHSGIITVAQKLDPSKQERFTLIV 1637

Query: 127  QATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            +A D G    K S T V + + P   T  P F +  Y   +SE A++ S
Sbjct: 1638 KAEDQGFPQLKDSAT-VHIRIRPSDQT-PPKFPEAEYITEISESAAVGS 1684



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P+   +P    +Q G E    + ++ ATD D+G NA ITYS      
Sbjct: 2062 TVKVYVEDVNDNPPQFENVPYYTSVQDGMEPGDVLFQVSATDKDIGNNAAITYSFAE--- 2118

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 F IDP  G I     L   A  +YS+ V A D G        EV V+   N  +P
Sbjct: 2119 -DYKYFWIDPYLGDISLKKPLDYHALNKYSLRVIAKDNGEPPLLAEEEV-VISVRNKSNP 2176

Query: 154  VFQQNTYDVNVSE 166
            +FQ   Y V V E
Sbjct: 2177 LFQSLYYRVKVPE 2189



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 41   VNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + DINDN P    MI    + ++  A   +V+I A+D D G N  ++Y I    +   
Sbjct: 2267 VEVEDINDNPPVFSEMIYTASVSESMPAHTPVVQIIASDKDSGRNKVVSYQILDDGSDAT 2326

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPV 154
              F ID  +G I T   L     +Q+ + V+A D G    SS  +V V+V    N   P 
Sbjct: 2327 KFFNIDASTGQITTAQALDYEKTQQFRMKVRAADHGTPPLSSDALVIVNVT-DINDNPPE 2385

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F Q  Y+  VSE A+    V  +
Sbjct: 2386 FSQLQYEAKVSEMATCGHIVLKV 2408



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 13/177 (7%)

Query: 19   FRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIVK-IE 74
            +  ++ AR+  K G        L V L D+NDN P  LP +  +++        I+  +E
Sbjct: 891  YALKIKARDQPKTGYQLFSVTDLIVTLEDVNDNDPHCLPALNNVKVPEDLPVGTILLFLE 950

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A D D G   E+ YS+    N     F ID  +G +    +L     + Y++TVQ  D+G
Sbjct: 951  AFDPDAGSGGEVRYSLV---NDEEMMFHIDKLTGALRLEKELDYEKKDSYNLTVQVRDSG 1007

Query: 133  ---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                +SS   +EV+V+    N   P F    +   V E +   ++V  +T   +  G
Sbjct: 1008 KPVSRSSLCHLEVNVLDVNENLYPPRFASFVFKGWVQENSPEGTSVMMVTAKDIDKG 1064



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 8/114 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TY+I   +N     F IDP SG+I T+  L   +    Y + V
Sbjct: 480 VLTVRATDEDEGDNGFVTYTI---ANQKSVPFVIDPYSGIISTSKSLDYELMQRWYHLRV 536

Query: 127 QATDTGGK-SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A+D G     +T V VS+ +   N  +PVF++ +   ++     + + VAT++
Sbjct: 537 WASDWGSPFRHETEVYVSLMLSNVNDNAPVFEKASCSGSIPRDFPVGNPVATVS 590



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2544 ITTLQKLDRENSTERVIAIKVMAKDGGGKVAFCTVKII--LTDENDNPPQFKASEYTLSI 2601

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++ YS+  V +       I+  +GV++    L+  E
Sbjct: 2602 QSNVSKGSPVIQVLAYDADEGANADVVYSVDSVEDVSEDIVEINAATGVVKVKESLVGLE 2661

Query: 121  Q--YSITVQATDTGGKSSQTIVEVS--VVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               ++  V+A D       ++V VS  +VP   T  P F +  Y  + SE     S + +
Sbjct: 2662 NRAFNFKVKAEDGRPPHWNSLVPVSLQIVPREVTL-PRFSEPLYTFSASEDLPEGSEIGS 2720

Query: 177  I 177
            +
Sbjct: 2721 V 2721



 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 4/96 (4%)

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPN 149
            V    L  F  D ++GV+  TG+L    Q  +S TV+ATDT  G  S+  VEV V    N
Sbjct: 2215 VEEDSLKLFSTDFKTGVLTVTGQLDYELQTKHSFTVRATDTALGSFSEARVEVEV-EDIN 2273

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               PVF +  Y  +VSE    ++ V  I  S   SG
Sbjct: 2274 DNPPVFSEMIYTASVSESMPAHTPVVQIIASDKDSG 2309



 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 19   FRFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKI 73
            F   V A + QGT   +    ++TV++ D+N+  P   + P       E      +++ +
Sbjct: 3190 FELTVCATD-QGTPQPLSALGTVTVSVVDLNEYLPVF-LAPEYVAMVKEDVAVGTEVLNL 3247

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A   D   N EI Y I + ++ G  KF+++  +G +   G L   A  +Y ++++ T  
Sbjct: 3248 SALTRDNTENTEIKYEIVNGNDHG--KFQLNSNTGALYINGSLDFEASHEYYLSIEGTRK 3305

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            G  S   +  V + +   N  +P F Q+ Y  ++ E A++   + T++   L
Sbjct: 3306 GSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEIILTVSADDL 3357



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 12/146 (8%)

Query: 40  TVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           T+NL+ IN NAP+     P  I   E       I  + A D D G N ++ Y I   S+ 
Sbjct: 703 TLNLHLINHNAPKFDDSFPRSIDIIENVPINSTIADLSAVDPDTGFNGKLVYVI---SDG 759

Query: 97  GLHK-FRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            +   F ID   G+++    L     +    +ITV    T  KSS  ++ V+V+   N  
Sbjct: 760 NVDSCFTIDLELGLLQILSPLDHERTSFYILNITVYDLGTPQKSSWKLLAVNVL-DTNDN 818

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +P F Q  Y V + E     +T+A +
Sbjct: 819 TPRFPQGAYWVAIPENVVTGTTIAQL 844



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 18  KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVK- 72
           K  + +I +  + T A      + +++ D ND  P     PP   + I+     + +V  
Sbjct: 115 KDSYMLIIKATENTFAYEAWAKVLIHILDRNDLKPLFS--PPSYKVSIREDTPLKTVVST 172

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + ATD D G NAE  Y++    NT    F I P +G + TTG+L
Sbjct: 173 LSATDADAGQNAEFYYAL----NTKSDLFTIHPTTGAVVTTGRL 212


>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
          Length = 4584

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2542 IFTSEKLDRETPAEKVIAVRLMAKDAGGRVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2599

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             A  A+   +VK+ A+D D G NA++TY+I   S +      I+  SGVI T   LI   
Sbjct: 2600 GASAAKGTSVVKVLASDTDEGSNADVTYAIEADSESVKENLEINKLSGVITTKESLIGLE 2659

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G    +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2660 NEFFTFFVRAVDNGSPPKESVVPVYVKILPPEMQLPRFSEPFYTYTVSEDMPIGTEIDLI 2719



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2970 WKVYVKKPLDREKRD--NYLLSITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYAD 3024

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY++Y    +G  KF+++P +G ++T  
Sbjct: 3025 TIP----EDAPPGKLIMQVSATDADIRSNAEITYTLY---GSGAEKFKLNPDTGELKTLA 3077

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3078 PLDREEQAIYNLVVKATDGGGRFCQANI-VLTLEDVNDNAPEFSADPYTITVFE 3130



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1542 IVVNVSDTNDHAPWFTSSSYEGRVYESSAVGSVVLQVTALDKDKGQNAEVLYSI-ESGNI 1600

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +  +P
Sbjct: 1601 G-NSFTIDPILGSIKTAKELDRSNQVEYDLMVKATDKGNPPMSEITSVHIFVTVADNAAP 1659

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1660 KFTSREYSVEISEAISIGSFVGMVTAHSQSS 1690



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 15/180 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + K+       V L V+L D+NDN P    IPP  +++  E  
Sbjct: 879  LDREVQHVHYLKIEARDQAKEEPQLFSTVLLKVSLEDVNDNPPMF--IPPNYRVKVREDL 936

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG ++++ YS+    + G   F +D  SG I    +L   ++  Y
Sbjct: 937  PEGTIIMWLEAYDPDLGQSSQVRYSLM---DHGEGNFDVDKLSGAIRIVQQLDFEKKQVY 993

Query: 123  SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G     SS   VEV V+    N   PVF        V E   I S+V T++
Sbjct: 994  NLTVRAKDKGKPISLSSTCYVEVEVIDVNENLHPPVFSSFVEKGIVKEDVPIGSSVMTVS 1053



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)

Query: 41   VNLNDINDNAPR-LPMIPPIQIQAGEA------RRQIVKIEATDNDLGVNAEITYSIYHV 93
            V + D NDN P+ L     I++   E       R  + ++ ATD D G NAEI+YSI   
Sbjct: 1229 VKILDENDNKPQFLQKFYKIRLPEREKPERNSKREPLYRVVATDKDEGPNAEISYSIEEG 1288

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PGPN 149
            +  G  KF I+P++G++ +     AGE   ++++A D G   KSS T + +  +  P P+
Sbjct: 1289 NEHG--KFFIEPKTGMVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPKPS 1346

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITV 179
                 F+++ +   V E   +   +  I+V
Sbjct: 1347 LEPISFEESFFSFTVMESDPVAHMIGVISV 1376



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3087 YNLVVKATDGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3146

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G   +
Sbjct: 3147 DAGLNRKISYSLI---NSAEGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDQGLPRR 3203

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + T V V  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3204 LTATSVVVVSVLDINDNPPVFEYREYGATVSEDILIGTEVLQV 3246



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 7/147 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            ++++N+ DINDN P       +  +     + ++ + A D D   N+ I YSI    N G
Sbjct: 3318 TVSINVTDINDNTPVFSQDTFVVSEDAVLEQSVITVMADDADGPSNSHIHYSITD-GNQG 3376

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               F IDP  G ++ T KL+  E    Y++TVQA+D G         V++ V   N  +P
Sbjct: 3377 -SPFTIDPVKGEVKVT-KLLDRETISGYTLTVQASDNGNPPRVNTTTVNIDVSDVNDNAP 3434

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF Q  Y V + E   +  +V  + V+
Sbjct: 3435 VFSQGNYSVIIQENKPVGFSVLQLVVT 3461



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 11/116 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------AGEQY 122
            +++++ A   D+  NA+ITYSI  +S     KF ID ++G +  +  +I      +  +Y
Sbjct: 3242 EVLQVYAASRDIEANADITYSI--ISGNEHGKFSIDSKTGNLRGSIFIIESLDYESSHEY 3299

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +TV+ATD G  S   +  VS+ V   N  +PVF Q+T+   VSE A +  +V T+
Sbjct: 3300 YLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTF--VVSEDAVLEQSVITV 3353



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2768 YQFSILARCTRDDYEVVASVEVSIQVK--DANDNSPLLESNPYEAFIVENLPAGSRVIQI 2825

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2826 RASDLDSGTNGQVMYSLDQSQSVDVIESFAINMETGWITTLKELDHEKRDSYQIKVVASD 2885

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2886 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2923



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P          Q  EAR          +  ++A D D     ++ Y
Sbjct: 2368 VIITVDVTDLNDNPPLFDQ------QIYEARISEHAPHGHFVTCVKACDADSSDVDKLEY 2421

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ V  +D   +SS   V ++V+ 
Sbjct: 2422 SI--LSGNDHKNFVIDSETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSAQ-VHITVIG 2478

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SPVF QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2479 G-NLHSPVFLQNEYEVELAENAPLHTLVIEVKATDGDSG 2516



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDNAP            +A      ++++ ATD+D   N  I+Y
Sbjct: 2255 TGAHADVFVDIIVEDINDNAPVFVQQSYAATLSEASVIGTSVIQVRATDSDSEPNRGISY 2314

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSV 144
             ++   +     F ID  +G+I     L     +Q+ I+V+A D G    SS  I+ V V
Sbjct: 2315 QMFGNHSKSQDYFHIDSSTGLISLVRTLDYEQFQQHRISVRAVDGGMPPLSSDVIITVDV 2374

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
                N   P+F Q  Y+  +SE A
Sbjct: 2375 T-DLNDNPPLFDQQIYEARISEHA 2397



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV 
Sbjct: 1049 VMTVSAHDEDPGRDGEIRYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTPHYWLTVY 1106

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1107 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1140



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDNAP   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 804 LDIRVLDANDNAPEF-LQESYFVEVSEDKELSSEIIQVEATDKDLGPNGHVTYSIL---- 858

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   +F ID  +GV++    L    Q  + + ++A D   +  Q    V +   +   N 
Sbjct: 859 TDTDRFSIDSVTGVVKIARPLDREVQHVHYLKIEARDQAKEEPQLFSTVLLKVSLEDVND 918

Query: 151 RSPVFQQNTYDVNVSE 166
             P+F    Y V V E
Sbjct: 919 NPPMFIPPNYRVKVRE 934



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I+ + ATD D G N ++ YSI   +      
Sbjct: 703 HSVNAHAPQFRSTLPTDIEVKENHPVGSDIIFMNATDLDTGFNGKLVYSISGGNEDSC-- 760

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ V   D G   K++  ++++ V+   N  +P F 
Sbjct: 761 FVIDMETGMLKILSPLDRETTDKYTLNVTVYDLGVPQKAAWHLLDIRVLDA-NDNAPEFL 819

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   ++S +  +
Sbjct: 820 QESYFVEVSEDKELSSEIIQV 840



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 115 IVKAVEKNTNAEARTKVRVRVLDTNDLRPLFSPTSYSVSLPENTAVRTSIARVSATDADI 174

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           G N E  YS    ++     F I P SGV+  TG+L  +  + Y + + A D G K
Sbjct: 175 GTNGEFYYSFRDRTDM----FAIHPTSGVVVLTGRLDYMEAKLYEMEILAVDRGMK 226



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+ T + V +    N   PVF Q
Sbjct: 1704 FDINPHSGSI-FTQKALDFETLPVYTLTIQGTNMAGLSTNTTLLVHL-QDENDNQPVFMQ 1761

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1762 TEYTGLISESASINSVVLT 1780



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+   +TY I  V++    +F  + R G I T+ KL     A +  ++ 
Sbjct: 2505 VIEVKATDGDSGIYGRLTYRI--VNDFAKDRFYTNER-GQIFTSEKLDRETPAEKVIAVR 2561

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GG+ +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2562 LMAKDAGGRVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGASAAKGTSVVKVLASDTDEG 2620



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2067 DQNDNAPVFVNLPYYAVVKVDT-EVGHVIRSVTAVDRDSGRNGEVHYYLKEHH------E 2119

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P +G I    +       ++Y +TV A D G    S++ IV V+V+   N   PV
Sbjct: 2120 HFQIGP-AGEISLIKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPVTVM---NKAMPV 2175

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   + E   I+S V  +
Sbjct: 2176 FEKPFYSAEIPENIQIHSPVVHV 2198



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1468 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQH 1522

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E +++ S V  +T
Sbjct: 1523 VLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESSAVGSVVLQVT 1579



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 8/173 (4%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
            LD +  +   F  QV         A    ++T+++ DIND  P   R      + +   +
Sbjct: 1829 LDYEETSTFHFTVQVHDMGVPRLFAEYAANVTIHVIDINDCPPVFSRSLYEASLLLPTYK 1888

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
              R ++ + ATD D   ++++ YSI    N G  KF +D ++G I          +Y + 
Sbjct: 1889 GVR-VLTVNATDADSNTSSQLMYSITE-GNIG-EKFSMDYKTGTITVQNTTQLRSRYELA 1945

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1946 IRASD-GRFASFTSVKINVKESKESQLK-FTQDFYSAVVKENSTEAKTLAVIT 1996


>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
          Length = 2916

 Score = 68.9 bits (167), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 15/182 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + ++SK  L+R+  +  K+  +VIA + +  AA+    + +++ D+NDN+P     P   
Sbjct: 1531 WKILSKAPLNRE--DTDKYLLRVIASDGKFQAAT---EVEISVLDVNDNSPECKQTPYKT 1585

Query: 61   IQAGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A +   ++K+ ATD D+G N +I Y+++     G   FR+DP +G + T   L+ 
Sbjct: 1586 KIVEDASQGFSVLKVSATDADVGSNGQIIYTLH---GPGAEDFRLDPHTGELNTFA-LLD 1641

Query: 119  GE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E   QY + V+ATD GG+  Q  + V  +   N  +P F  +   V + +  +IN+ +A
Sbjct: 1642 RELKPQYQLVVKATDGGGRFCQMDLIVD-IEDANDNAPRFFPSHCAVAIFDNTTINTPIA 1700

Query: 176  TI 177
             +
Sbjct: 1701 VV 1702



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 11/169 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDL 80
           V+ R+++G        + +++ D N++ P+   +      + A     ++V++ A D D 
Sbjct: 91  VMVRDQEGPIKRDFARVVIHVEDSNNHPPQFTSLHYNAEVLDAAPVGTEVVQVRALDQDQ 150

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG---KS 135
           GVNAEI Y++   +N     F I+  SG+I  + KL   +Q  +++TV+A D G    K 
Sbjct: 151 GVNAEIHYNLEAGNNGDF--FTINMFSGIITVSQKLHHSKQERFTLTVKAEDQGFPQLKD 208

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           S T V V + P   T  P F +  Y V +SE A+I S+V  ++ + L+S
Sbjct: 209 SAT-VNVYIKPSDGT-PPQFSEEQYVVEISEFAAIGSSVILVSATSLSS 255



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++  V+A    Q T     VS+ +++ D+NDN P     P     ++       ++++ A
Sbjct: 1330 YQIDVLAHCSHQDTDLVSLVSINIHVKDVNDNKPVFEANPYRAFVMENMPTGTTVIQVTA 1389

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D G + ++TYS+    +     F ID  SG I T  +L     E Y   V A+D G 
Sbjct: 1390 NDQDTGSDGQVTYSLRSEPDNIRKLFTIDSESGWITTLKELDCEVQETYKFFVVASDHGR 1449

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            K   SSQT+VEV++    N  +P F    Y  ++ E A     + T+
Sbjct: 1450 KIQLSSQTLVEVTIT-DENDNAPQFTSEIYKGSIVENAEPGLMITTL 1495



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 17/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IV 71
            ++   V    K   + S    + +N+ DIND+ P+        +   + R        ++
Sbjct: 1855 EYYLSVEGTRKSSVSLSDIAMVIINVTDINDHVPKFSQ----DLYVADTREDAAVGEIVL 1910

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQAT 129
             + A D D  +N +ITYSI  V+   L  F IDP++G I     L   E   YS+ VQAT
Sbjct: 1911 TVLADDKDGVMNNQITYSI--VAGNPLSHFIIDPQTGEIRIAKYLDREEISSYSLKVQAT 1968

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G +  SS T V +  V   N   P F Q  Y   V E + + ++V  + +S
Sbjct: 1969 DNGQEPLSSDTTVLIR-VSDVNDNPPRFFQLNYSAAVQENSPVGTSVLELVLS 2020



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 12/182 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V+S+ + + D     K  F V A +    A S  V + V + D+NDN P    +  I  
Sbjct: 792 MVISQVDYESDT----KHSFTVRATDTAVGAFSEAV-VEVEIEDVNDNRPAFSQMVYIAS 846

Query: 62  --QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             ++   R  I+++ A D D G N  I+Y I    +     F ID  +G I TT  +   
Sbjct: 847 VSESMPPRSPIIQLFANDRDSGRNRLISYQILEERSNASKFFTIDSSTGEITTTQVIDYE 906

Query: 118 AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           A +++ I V+A D G    SS+T+V ++V+   N   P F Q  Y  NVSE  S    V 
Sbjct: 907 ANQEFYIKVRAMDHGVPPLSSETLVAITVL-DVNDNPPKFSQPQYQANVSEIVSCGHVVI 965

Query: 176 TI 177
            +
Sbjct: 966 KV 967



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 15/176 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEA- 66
            LDR+     K ++Q++ +   G      + L V++ D NDNAPR  P    + I      
Sbjct: 1640 LDREL----KPQYQLVVKATDGGGRFCQMDLIVDIEDANDNAPRFFPSHCAVAIFDNTTI 1695

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
               I  + A D D G NAE+ YS+   + +    F I+  +GVI     L+  +     +
Sbjct: 1696 NTPIAVVIARDADEGHNAEVVYSL---AESASGHFSIEETTGVIHLEKPLMELQTSALEL 1752

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            TV ATD G     SS   V VS+V       P+F  + Y + V E  ++ + V  +
Sbjct: 1753 TVCATDKGSPYSLSSLATVAVSIV-DLKEYLPIFLDSEYVIVVQEDVALGTDVLNL 1807



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 12/163 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
            +F  +V A +      S    + + + D+NDN P+    P  Q    E       ++K++
Sbjct: 910  EFYIKVRAMDHGVPPLSSETLVAITVLDVNDNPPKFSQ-PQYQANVSEIVSCGHVVIKVQ 968

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            A D D    +++ Y I  +S      F I+  SG+I T  +     +  Y +TV A+D  
Sbjct: 969  AFDPDSWNTSKLEYLI--LSGNEKRHFTINSTSGIISTLNRCKRDLEPFYDLTVSASDGV 1026

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             K   T V V +     N  SP FQQ+ Y+  ++E A I + V
Sbjct: 1027 FK---TTVPVYINATNVNKYSPSFQQDVYEAVLAENAEIGTKV 1066



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 9/141 (6%)

Query: 41  VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           ++++DINDN P    +P  I IQ G E    I ++ ATD D G N  I YS         
Sbjct: 624 IHVDDINDNPPHFENVPYYIAIQDGTEPGDVIFQVSATDKDSGNNGVIFYSFVE----DY 679

Query: 99  HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
             F IDP  G I     L   A  +Y + V A D G        +V V+   +  +P+FQ
Sbjct: 680 KYFWIDPYLGDISLKKPLDFQALNKYILRVTARDAGEPPLYAEEKVLVIVR-DKSNPLFQ 738

Query: 157 QNTYDVNVSEGASINSTVATI 177
              Y V V E   + + +  I
Sbjct: 739 SLFYTVKVPENIPLYTPILHI 759



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 20/154 (12%)

Query: 33  ASVPVSLTVNLNDINDNAP-------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
           AS P  +T+ + D+ND  P        L +  P+         +I  + A D    V++E
Sbjct: 418 ASTPTEVTIYVKDVNDCPPAFTKDSYELSVERPVH-----PNMEISTVHAED----VDSE 468

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV 145
           ITYSI+  ++  +  F I P +GVI        G  + +T++A+D G  ++  +V ++ V
Sbjct: 469 ITYSIFDGNHDRI--FNICPNTGVISVLNATTLGHYHELTIRASD-GLYTTNALVRINFV 525

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
               + S  F Q+ Y   V E ++   T+  + V
Sbjct: 526 EAQGS-SLRFGQDLYTATVKENSTEVQTLIVLDV 558



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPN 149
           V    L KF ID ++GV+    ++   +  ++S TV+ATDT  G  S+ +VEV  +   N
Sbjct: 774 VEEEALKKFNIDFKTGVLMVISQVDYESDTKHSFTVRATDTAVGAFSEAVVEVE-IEDVN 832

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F Q  Y  +VSE
Sbjct: 833 DNRPAFSQMVYIASVSE 849



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 10/178 (5%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQA 63
            + LDR+         +++A++  G  A   V +   L D NDN P+      +  +Q   
Sbjct: 1107 QKLDRENSTERVIAIKIMAKDAGGKVAFCTVKII--LADENDNPPQFKASEYVLSVQSNV 1164

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--IAGE 120
             E    ++++ A D D GVNA++ YS+  V    +     I+  +GV++    L  +   
Sbjct: 1165 SEGS-PVIQVLAYDADEGVNADVIYSVDSVDEVIVEDVIEINTATGVVKVKESLNQLENR 1223

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
              +  V+A D       ++V V++   P   S P F +  Y  + SE     S + ++
Sbjct: 1224 TVNFKVKAEDARPPHWNSVVPVNLHVVPKEASLPRFSEPLYTFSASEDLPEGSEIGSV 1281


>gi|148664769|gb|EDK97185.1| mCG140834 [Mus musculus]
          Length = 796

 Score = 68.9 bits (167), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P  +  +
Sbjct: 193 FLVLGK-SLDRE--EDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 249

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A   +V K+ A+D D G N+EI YS+   VS+T   KF+IDP SG + T G+L 
Sbjct: 250 QLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELD 309

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E+  Y I V A+D G  +     ++SV +   N  +P     +  + V E A + + +
Sbjct: 310 YEERTSYEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGAVI 369

Query: 175 ATITVSRLASG 185
           A I+VS   SG
Sbjct: 370 ALISVSDRDSG 380



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QVIA +K   A S    ++V L DINDN P + +     P+Q  A      I  I  
Sbjct: 316 YEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGA-VIALISV 374

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     A   Y + V A D G  
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPFKLVSTFK-NYYSLVLDSALDREATADYKVMVTARDGGSP 433

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S +    VSV V   N  +PVF Q  Y V V E
Sbjct: 434 SLRATASVSVEVADVNDNAPVFAQPEYTVFVKE 466



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 22/183 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   +  G +  ++V       
Sbjct: 531 LQFQVTARDAGVPALGSNVTLQVFVLDENDNAPLL--LPQGAVGVGGSVSELVPRSVGSG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--IAGEQYSI 124
               K+ A D D G NA ++Y +   S  G+   FR+   +G I TT  L  +   +  +
Sbjct: 589 HVVTKVRAVDADSGYNAWLSYELQ--STVGMRSLFRVGLYTGEISTTRALDEVDAPRQRL 646

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V   D G  S      V V    N+++P     T    + + A   +++ T+ V  + +
Sbjct: 647 LVLVKDHGEPSLTATATVLVSLVENSQAP----KTSSRALVDAAGQEASLVTVNVYLVIA 702

Query: 185 GCA 187
            CA
Sbjct: 703 ICA 705



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 9/153 (5%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTG 97
           V + DINDN PR PM     IQ  E+R    +     A+D D+GVNA ++Y +       
Sbjct: 121 VEVRDINDNPPRFPMTEKT-IQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFF 179

Query: 98  LHKFRIDPRS-GVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           L     D  S  +    GK +  E   +  + + ATD G       V++ + V   N   
Sbjct: 180 LDVQTSDELSQSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNE 239

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 240 PTFPQSVYKVQLLENTANGTLVMKLNASDADEG 272


>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2244

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E+LDR+          ++AR+  G      V+  V L DINDNAP+          
Sbjct: 1302 IFTLESLDRENNMEKVVPISLVARDGGGKVGFCVVN--VILTDINDNAPQFRAADYKSTI 1359

Query: 63   AGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
            A +  R   +V+I A+D D G NA+I YSI          F I P SG+I T   LI   
Sbjct: 1360 ASDVPRGTSVVRISASDLDEGSNADIEYSIEADVENVEENFEIHPTSGLIVTKESLIGLE 1419

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E Y+  V+A DTG     ++V+V++ +  P T  P F +  Y   V+E   I + +  I
Sbjct: 1420 NELYAFFVRAKDTGNPPQHSVVQVNIRIVAPETPIPKFNEAQYRYTVAEDLPIGTEIDVI 1479



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V + VN++D NDNAP     P      ++      ++++ A D D G NAE+ YS+   S
Sbjct: 300 VRVIVNVDDTNDNAPWFVGAPFSGRVFESAAVGSAVLQVTARDKDKGRNAEVVYSLE--S 357

Query: 95  NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
               + F IDP+ G I    +L   +  QY +TV+A+D G     T   V + V   +  
Sbjct: 358 GNFANTFSIDPKLGTITVAKELDRDSKAQYELTVKASDNGVPPLSTTAPVRIAVTVSDNA 417

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           +P F +  +  +VSE A   S VA +T S  +S
Sbjct: 418 APRFTEREFSADVSESAHPGSFVALVTASSQSS 450



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 7/143 (4%)

Query: 45   DINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            DINDN P           + +     Q+++++A   D   N EI+Y I   +  GL  F 
Sbjct: 1977 DINDNPPVFEHREYTATVSEDVSVGTQLLRVQAASRDTEANGEISYGIISGNEHGL--FS 2034

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
            +DPR+G I     L   A  +Y ITV+ATD G      +  V++ +   N   PVF Q+ 
Sbjct: 2035 VDPRTGDIFVIQPLDYEASHEYYITVEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDV 2094

Query: 160  YDVNVSEGASINSTVATITVSRL 182
            Y   VSE A +  TV T+    L
Sbjct: 2095 YTAVVSEDAELGKTVITVNAEDL 2117



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 13/128 (10%)

Query: 32  AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
           A S  V + V + D NDN P         +LP     + +    R  + ++ A+D D G 
Sbjct: 10  AKSTSVRVIVQVLDENDNRPLFLEKIYKIKLPEREKPEKERAIKRDPVYRVIASDRDDGP 69

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIV 140
           NAEI+YSI      G  KF I+P++G++ +     AGE   +T++A D G   KSS   +
Sbjct: 70  NAEISYSIEEGDENG--KFFIEPKTGLVSSKKFSSAGEYDILTIKAVDNGRPQKSSSCRL 127

Query: 141 EVSVVPGP 148
            +  +P P
Sbjct: 128 HIEWIPKP 135



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + L D+NDNAP   +         EA     +I++++A D+D G N E+ 
Sbjct: 1015 TGAHSDVFVDIILEDVNDNAPVF-LSKAYHANVSEASVVGTRILQVDAKDSDTGNNQEVF 1073

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
            + +          F ID  +G I T   L   E  Q+ + V+A D G    SS+ IV + 
Sbjct: 1074 FQLVEEKGESSDFFTIDRDTGTISTAQLLDYEEIRQHELRVRAVDRGVPALSSEVIVTID 1133

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N  +P F Q TY+  +SE A
Sbjct: 1134 VT-DLNDNAPEFTQQTYNSTISELA 1157



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 13/189 (6%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
            + V  K+ LDR+  +   +   + A +   TA +   ++ V + D NDN+P+    +   
Sbjct: 1732 WKVFVKKPLDREEKD--NYLLNITASDGIFTAKA---TVEVKVLDANDNSPQCEKALYSE 1786

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               +   A R I+++ A+D D+  NA+I    Y +   G   F ID  +G ++T   L  
Sbjct: 1787 SVPENSPAGRLILQVSASDADIRSNAQI---FYELQGAGSELFTIDSDTGELKTLQPLDR 1843

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             EQ  +   ++A D GG+  +  + V VV   N   P F  + Y V V E   I + VA 
Sbjct: 1844 EEQEEHRFKMRAVDGGGRYCEADIHV-VVEDVNDNLPQFSADLYTVTVFENTEIGTYVAK 1902

Query: 177  ITVSRLASG 185
            +  + +  G
Sbjct: 1903 LLANDVDVG 1911



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 18/162 (11%)

Query: 24  IAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDL 80
           + RE Q    +  V LTV + D NDN P    LP    +Q+ A E    I ++ A D D+
Sbjct: 807 VTREGQSEDGA-HVLLTVMVEDANDNRPMFVNLPYHALVQMDAEEGHL-IRQVTAVDRDM 864

Query: 81  GVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA---GEQYSITVQATDTGGKS 135
           G NAEI Y +        H+  F+I P SG I    KL        + I V A D G  +
Sbjct: 865 GQNAEIQYLLKE------HQEFFQISP-SGEISLKKKLQKESLNTDFVIVVVAQDNGNPA 917

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               VEV V    N   P F++  Y + + E   +++ V  +
Sbjct: 918 LSAEVEVPVTV-VNKAMPAFEKAFYTIEIPENIQLHTPVLHV 958



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 14/175 (8%)

Query: 9   LDRDPPNPGKFRFQV----IAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQ 62
           LD +  N   F  QV    I R    TAA+V    T+ + D+ND  P           I 
Sbjct: 589 LDYEERNTFHFTVQVHDLGIPRLFAETAANV----TIEVTDVNDCPPVFSQKTYEATVIT 644

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                 ++++I ATD+D G NA++  SI    N G  KF++DP +G+I          +Y
Sbjct: 645 PTYKGVKVIQINATDSDSGPNAKLLLSISE-GNIG-DKFKMDPTTGIISVQNVTQLRSRY 702

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + V+ +D G  SS   V+++V      +   F + +Y   V E +S   T+  I
Sbjct: 703 ELKVRVSD-GRFSSVATVKINVKENKENKLK-FTKESYKAFVQENSSEKKTLEVI 755



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 10/139 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YH 92
            V + + + D+NDN P     P   + ++   +  Q++++ A+D D G N ++ YS+    
Sbjct: 1547 VIVNIQVKDVNDNKPVFESDPYEAVVVENLPSGTQVIQVRASDQDSGTNGQVIYSLDARQ 1606

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPG 147
             S      F ++  +G + T  +L     ++Y+I V ATD G +   ++ T VEV+V   
Sbjct: 1607 SSEEISELFAVNSETGWVTTLKELDREKMQRYTIAVLATDQGDRIQHATGTRVEVTVA-D 1665

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N   P F    Y   VSE
Sbjct: 1666 VNDNPPRFTAEIYKGTVSE 1684



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 12/174 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
            LDR+     +F+ + +     G        + V + D+NDN P+    +      +  E 
Sbjct: 1841 LDREEQEEHRFKMRAV----DGGGRYCEADIHVVVEDVNDNLPQFSADLYTVTVFENTEI 1896

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               + K+ A D D+G N+ I YS+   S  G   F ID ++GVI     L    Q  Y +
Sbjct: 1897 GTYVAKLLANDVDVGPNSNIIYSLLD-SADGF--FSIDEQTGVISLERPLDRELQSTYEL 1953

Query: 125  TVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               A+D G  + S     V  V   N   PVF+   Y   VSE  S+ + +  +
Sbjct: 1954 RALASDQGLPRLSSVCQVVVSVLDINDNPPVFEHREYTATVSEDVSVGTQLLRV 2007



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
            A S  V +T+++ D+NDNAP           +  A R   I +++A+D D      + + 
Sbjct: 1123 ALSSEVIVTIDVTDLNDNAPEFTQQTYNSTISELAPRGHFITQVQASDADSSDKDNLLF- 1181

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
             +   N  L+ F ID  +G I  +       Q  Y+++V  +D   +SS  ++ V+V+ G
Sbjct: 1182 FFTSGNEDLN-FSIDKHTGAILISNHRRVHMQPFYNLSVSVSDGVFRSSAAVL-VTVI-G 1238

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVA 175
             N  SP F Q  + V + E + I + VA
Sbjct: 1239 ANFHSPTFSQTEFVVELVEHSEIYTPVA 1266



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F I+P SGV+ T   L      QY++ +Q T+  G  + T + V +    N  +P+F Q 
Sbjct: 464 FDINPNSGVVVTQRPLDYETTAQYTLVIQGTNMAGLGTNTTLLVHL-KDENDNAPIFIQK 522

Query: 159 TYDVNVSEGASINSTVAT 176
            +   VSE A +NS V T
Sbjct: 523 EFRGVVSESAPVNSVVLT 540


>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
            [Oreochromis niloticus]
          Length = 3519

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            VN+ND+NDNAP+  + P  Q    E   +   I++I ATD D   N  + Y+  +  + G
Sbjct: 1114 VNVNDVNDNAPQF-LSPRYQGTVSEDAPSYTSILQISATDRDAHANGRVQYTFQNGEDGG 1172

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
               F I+P+SG++  + +L       Y +T  A D G  S QT V + V V   N  +PV
Sbjct: 1173 -GDFTIEPKSGIVRNSRRLDRENVPFYELTAYAVDRGVPSQQTPVHIQVTVLDVNDNAPV 1231

Query: 155  FQQNTYDVNVSEGASINSTVATITVS 180
            F  + ++V V E +++ S VA IT +
Sbjct: 1232 FPADDFEVLVKENSAVGSVVAQITAT 1257



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ S + LDR+  +   FR           + +  VS+TV+  D ND++P        Q 
Sbjct: 551 LITSTQILDREHMDLHYFRVTATDHGSPRLSGTTMVSITVS--DRNDHSPIFE-----QS 603

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETT 113
           +  E  R+       I+++ ATD+D   NA I Y     S T     F IDPRSG+I T 
Sbjct: 604 EYRETIRENVEEGYPILQLRATDSDSPSNANIRYRFVGDSATMARAAFEIDPRSGLITTR 663

Query: 114 GKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y++ V+A+D G   G  S T+     V   N   P F +  Y V V E  
Sbjct: 664 GSVDRETNEHYTLQVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKENV 723

Query: 169 SINSTVATITVS 180
             +S +  ++ +
Sbjct: 724 RPHSEILRVSAT 735



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            IV I ATD+D+G NA ITY +       + +FRIDP +G I    +L   +Q  Y++ + 
Sbjct: 1042 IVVISATDDDVGENARITYFL----EDNIPQFRIDPATGAITLQAELDYEDQMTYTLAIT 1097

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   KS  T VEV+ V   N  +P F    Y   VSE A   +++  I+ +
Sbjct: 1098 AKDNGIPQKSDTTYVEVN-VNDVNDNAPQFLSPRYQGTVSEDAPSYTSILQISAT 1151



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++ ++DR+       + +   + K     S  V + + + D NDN P+      +  
Sbjct: 659 LITTRGSVDRETNEHYTLQVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVA 718

Query: 62  QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
                R   +I+++ ATD D   NA + Y+I  +S     +F ID  +G I+    L   
Sbjct: 719 VKENVRPHSEILRVSATDRDKDSNAVVHYNI--ISGNSRGQFSIDSVTGEIQVVAPLDYE 776

Query: 118 AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
           A  +Y++ V+A D G     ++  IV V V    N   P+F    +  +V E A I S++
Sbjct: 777 AEREYTLRVRAQDNGRPPLSNNTGIVSVQVT-DVNDNPPIFVSTPFQASVLESAPIGSSI 835

Query: 175 ATI 177
             I
Sbjct: 836 LHI 838



 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            +V +   LDR+  N   +     A ++   +   PV + V + D+NDNAP  P     + 
Sbjct: 1183 IVRNSRRLDRE--NVPFYELTAYAVDRGVPSQQTPVHIQVTVLDVNDNAPVFPADDFEVL 1240

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            ++   A   +V +I ATD D G NA+I Y I  V       F++D  SG + +   L   
Sbjct: 1241 VKENSAVGSVVAQITATDPDEGANAQIMYQI--VEGNIPEIFQMDIFSGELTSLIDLDYE 1298

Query: 118  AGEQYSITVQAT 129
               +Y I VQAT
Sbjct: 1299 TRNEYVIVVQAT 1310



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 18/187 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
             V  K  LDR+      + F V AR+      S   S+T+ + D+NDN P   +     +
Sbjct: 872  WVTVKSILDRESVE--HYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEF-LQKEYYV 928

Query: 62   QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--- 115
            +  E       +V + A D D  VN+ +TY I        ++F I    G    +     
Sbjct: 929  RLNEDAAVGTSVVTVTAVDRD--VNSAVTYQI--TGGNTRNRFAISTAGGGGLLSLALPL 984

Query: 116  -LIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  +Y +TV A+D   ++     +V + +   NT  PVFQ   Y V+V+E     ST
Sbjct: 985  DYKQERRYVLTVTASD---RTLHDTCQVHINITDANTHRPVFQSAHYSVSVNEDQPPGST 1041

Query: 174  VATITVS 180
            +  I+ +
Sbjct: 1042 IVVISAT 1048


>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
          Length = 4588

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V + E LDR+ P       +++A++  G  A   +++   L D NDNAP+       + I
Sbjct: 2548 VFTLEKLDRETPAEKVIPVRLMAKDTGGKVAFCTINII--LTDDNDNAPQFRATKYEVNI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +G A+   I+K+ A+D D G NA++TY+I   S +      I+  SGVI T   LI   
Sbjct: 2606 GSGAAKGASIIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G    +++V V + +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAMDNGSPPKESVVPVYIKILPPEMQLPKFSEPFYTYTVSEDIPIGTEIDVI 2725



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D+ND+AP            ++      +++I A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDMNDHAPWFTSSSYEGRVYESAAVGSVVLQITALDKDKGENAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1607 G-NSFTIDPILGSIKTAKELDRSNQVEYDLIVKATDKGNPPMSEITSVHVFVTVADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  S  S V  +T    +S
Sbjct: 1666 KFTSKEYSVEISETVSTGSFVGMVTAHSQSS 1696



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V++ DINDN P              I  G    +++++ A   D+  NAEITY I  
Sbjct: 3215 SVIVSVLDINDNPPVFEYREYGATVSEDILIG---TEVLQVYAASRDIEANAEITYLI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G I     L   +  +Y +TV+ATD G  S   +  V++ V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAILEQSVITV 3357



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNAKREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISRPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPIAFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 7    ENLDR-DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQA 63
            E  DR D  +   +   V A ++     S  + + + + D+NDNAP+   P+  P  ++ 
Sbjct: 1092 ETCDRLDRESTSHYWLTVYAADQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEVMEN 1151

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  EQ  
Sbjct: 1152 SPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDREQQD 1209

Query: 122  -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1210 EHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 15/166 (9%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       ++ + L D+NDN P     P      +  E    + +++ATD 
Sbjct: 3093 YNLLVKATDGGGRFCEANIVLTLEDVNDNPPEFTADPYTIAVFENTEPGTPLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---- 132
            D G+N +I+Y +    N+   +F I+  SG+I+    L    Q  Y++TV+A D G    
Sbjct: 3153 DAGLNQKISYLLM---NSADGQFSINELSGIIQLEKPLDRELQAVYTLTVKAVDQGLPRR 3209

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +S  IV V  +   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTATSSVIVSVLDI---NDNPPVFEYREYGATVSEDILIGTEVLQV 3252



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+     K  + +      GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREQ----KDNYLLTITATDGTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + +++I ATD D+  NAEITY+++    +G  KF+++P +G ++   
Sbjct: 3031 TIPEDALPG----KLVMQISATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELKILT 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L    Q  Y++ V+ATD GG+  +  + V  +   N   P F  + Y + V E
Sbjct: 3084 ALDREHQAVYNLLVKATDGGGRFCEANI-VLTLEDVNDNPPEFTADPYTIAVFE 3136



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR         ASV VS+ V   D NDN+P L   P     ++      ++++I
Sbjct: 2774 YQFSILARCTHNDNEIVASVEVSIQVK--DANDNSPVLESNPYEAFVVENLPGGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++TYS+    S   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDLDSGTNGQVTYSLDLSQSEEVIESFTINKETGWITTLKELDHEKRANYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  +V+V++    N   P F    Y   VSE
Sbjct: 2892 HGEKVQLSSTAVVDVTIT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I    A  Q V  ++A D D     ++ YSI  +S
Sbjct: 2374 VIVTVDVTDLNDNPPLFDRQIYEAKISEHAAPGQFVTCMKAYDADSSDIDKLEYSI--LS 2431

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ +  +D   +SS   V V+V+ G N  S
Sbjct: 2432 GNDHKTFVIDSETGIITLSSLRRHTLKPFYSLNISVSDGVFRSSAQ-VHVTVIGG-NLHS 2489

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2490 PVFVQNEYEVELAENAPLHTLVIEVKATDEDSG 2522



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)

Query: 9    LDRD--PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGE 65
            LDR+  P +  K   +  ARE+    ++V   L V+L D+NDN P    IPP  +++  E
Sbjct: 883  LDREVQPVHYLKIEARDQAREEPQLFSTV--LLKVSLEDVNDNPPVF--IPPSYRVKVRE 938

Query: 66   ARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
               +   I+ +EA D DLG ++++ YS+      G   F +D  SG +    +L   ++ 
Sbjct: 939  DLPEGTIIMWLEAHDPDLGQSSQVRYSLMDHGEGG---FDVDKLSGAVRIVQQLDFEKKQ 995

Query: 122  -YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             Y++TV+  D G     SS   +EV V+    N   PVF        V E   + S+V T
Sbjct: 996  VYNLTVRVKDKGKPTSLSSTCYIEVEVIDVNENLYPPVFPSFVEKGIVKEDVPLGSSVMT 1055

Query: 177  ITVSRLASG 185
            ++     +G
Sbjct: 1056 VSAHDEDTG 1064



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 21/169 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            F   V   E++  +A   V + V + D NDNAP    LP    +++   E    I  + A
Sbjct: 2047 FDVVVEVTEEKRPSAVAHVVVKVTIEDQNDNAPVFVNLPYYAVVKVDT-EVDHVIRYVTA 2105

Query: 76   TDNDLGVNAEITYSI--YHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATD 130
             D D G N E+ Y +  +H        F++ P SG I    +       ++Y ITV A D
Sbjct: 2106 VDRDSGKNGEVHYYLKEHH------EHFQVGP-SGEISLKKQFELDTLNKEYLITVVAKD 2158

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             G    S++ IV ++VV   N   PVF+Q  Y   + E   ++S V  +
Sbjct: 2159 GGNPAFSAEVIVPITVV---NKAMPVFEQTFYSAEIVENVQMHSPVVHV 2204



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 18/139 (12%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVNA 84
            T+ S    + V + D+N+N    P + P  ++ G  +  +      + + A D D G + 
Sbjct: 1010 TSLSSTCYIEVEVIDVNENL--YPPVFPSFVEKGIVKEDVPLGSSVMTVSAHDEDTGRDG 1067

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEV 142
            EI YSI   S  G+  F+ID  +GVIET  +L   +   Y +TV A D G     + +EV
Sbjct: 1068 EIRYSIRDGSGIGV--FKIDEETGVIETCDRLDRESTSHYWLTVYAADQGVVPLSSFIEV 1125

Query: 143  SVV------PGPNTRSPVF 155
             +         P T  PV+
Sbjct: 1126 YIEVEDVNDNAPQTSEPVY 1144



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ +N+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ + A D D   N+ I YSI    N G + F ID   G ++ T  L    I+G 
Sbjct: 3349 ILEQSVITVMADDADGPSNSHIRYSIID-GNQG-NPFTIDSVKGEVKVTRLLDRETISG- 3405

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA+D G         V++ V   N  +P F Q  Y + V E   +  +V  + V
Sbjct: 3406 -YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSQENYSLIVQENKPVGFSVLQLVV 3464

Query: 180  S 180
            +
Sbjct: 3465 T 3465



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P            +A      +V + ATD+D   N  I+Y
Sbjct: 2261 TGAHAEVFVDIVVEDINDNPPVFAHQSYAATLSEASVIGTSVVHVRATDSDSEPNRGISY 2320

Query: 89   SIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGK--SSQTIVEVSV 144
             ++   +     F ID  +G+I    T      +Q+ I V+A D G    SS  IV V V
Sbjct: 2321 HMFGNHSKSHDHFHIDSSTGLISLVRTLDFEQSQQHKIFVRAVDGGMPPLSSDVIVTVDV 2380

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGAS 169
                N   P+F +  Y+  +SE A+
Sbjct: 2381 T-DLNDNPPLFDRQIYEAKISEHAA 2404



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     T   KF
Sbjct: 814 DANDNPPEF-LQESYFVEVSEDKEVNSEIIQVEATDKDLGPNGHVTYSIL----TDTDKF 868

Query: 102 RIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQ 156
            ID  +GV++    L    Q  + + ++A D   +  Q    V +   +   N   PVF 
Sbjct: 869 SIDSVTGVVKIIHTLDREVQPVHYLKIEARDQAREEPQLFSTVLLKVSLEDVNDNPPVFI 928

Query: 157 QNTYDVNVSE 166
             +Y V V E
Sbjct: 929 PPSYRVKVRE 938



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           V+   ++ T +     + V + D ND  P   P    I +    A R  I ++ ATD D+
Sbjct: 120 VVKAVEKNTNSEARTKVRVQVLDTNDLRPLFSPTSYSISLPENTAIRTSIARVSATDADI 179

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           G N E  YS    ++     F + P SGV+  TGKL  I  + Y + V A D G K
Sbjct: 180 GTNGEFYYSFKDRTDM----FAVHPTSGVVVLTGKLDYIETQLYEMEVLAVDRGMK 231



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + IN +AP+     P  I+  E       ++ + ATD D G N ++ Y+I   +      
Sbjct: 707 HSINAHAPQFRTTLPTSIEVKENHPMGSSVIFMNATDLDTGFNGKLVYAISGGNEDS--S 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++YS+ +   D G   K++  ++++ +V   N   P F 
Sbjct: 765 FIIDMETGMLKVFSPLDRETKDRYSLNITVYDLGIPQKATWHLLDL-IVLDANDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   +NS +
Sbjct: 824 QESYFVEVSEDKEVNSEI 841



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+  +ITY I  V++    +F  + + G + T  KL     A +   + 
Sbjct: 2511 VIEVKATDEDSGIYGQITYHI--VNDFAKERFYTNEQ-GQVFTLEKLDRETPAEKVIPVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A DTGGK +   + + ++   N  +P F+   Y+VN+  GA+  +++  +  S    G
Sbjct: 2568 LMAKDTGGKVAFCTINI-ILTDDNDNAPQFRATKYEVNIGSGAAKGASIIKVLASDADEG 2626



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  IT
Sbjct: 1529 ILTVMVRDQDVPVKRNFARIVVNVSDMNDHAPWFTSSSYEGRVYESAAVGSVVLQIT 1585



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N   PVF Q
Sbjct: 1710 FDINPHSGSI-ITQKSLDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDNLPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 18/179 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  +   F  QV         A    ++T+++ DIND  P           ++P  
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSVYEASLLLPSY 1893

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +I+ + ATD D    +++ YSI    N G  KF +D ++G +         
Sbjct: 1894 R------GVKIITVNATDADSSAFSQLIYSITE-GNIG-EKFLMDYKTGTLTVQNTTQLR 1945

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +Y +TV+A+D G  +S T V+++V     ++   F Q++Y   V E ++   T+A IT
Sbjct: 1946 SRYELTVRASD-GRFASFTSVKINVKESKESQLK-FTQDSYFAVVKENSTEAKTLAVIT 2002


>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
 gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
          Length = 3471

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 9/185 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + +KE LDR+      +   V AR++     S  V + +++ D+NDNAP +  P    + 
Sbjct: 1176 ITTKEPLDREQRE--LYDLLVEARDQGSPQRSARVPVRIHVTDVNDNAPEIADPQEDVVS 1233

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V+I A D D G NA ITYSI    ++  H  F IDP++GVI T   L  
Sbjct: 1234 VREEQPPGTEVVRIRAIDRDSGQNASITYSIVKGRDSDGHGLFSIDPQTGVIRTRTVLDH 1293

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V ATD G    +T+  + V V   N   P F  ++    V E AS+   V 
Sbjct: 1294 EERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDASVGHVVG 1353

Query: 176  TITVS 180
            +I+ S
Sbjct: 1354 SISPS 1358



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVP--VSLTVNLNDINDNAPRLPMIPPIQI 61
            +S  +LDR+     ++  QV A ++ G   S+    ++T+ + D NDNAPR  +   I  
Sbjct: 1862 LSARSLDRE--QHSRYTLQVQASDR-GKPNSLQGQCNITILVEDQNDNAPRFELPKYIAN 1918

Query: 62   QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             A +A     +V+I+A D DLG+NA + Y++   +N    +F ID +SG+I T GKL   
Sbjct: 1919 IAEDAAIGSSVVRIKANDADLGINARLVYAL---ANETQWQFAIDSKSGLITTVGKLDRE 1975

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  YS    ATD G    +S++  V+++V+   N   PVF++  Y
Sbjct: 1976 LQSSYSFMALATDGGRYEVRSARVPVQINVL-DVNDNKPVFERYPY 2020



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 26/185 (14%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
            L+ +   LDR+  +   + F  +A +    +  +A VPV   +N+ D+NDN P     P 
Sbjct: 1965 LITTVGKLDRELQS--SYSFMALATDGGRYEVRSARVPVQ--INVLDVNDNKPVFERYPY 2020

Query: 58   ----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG----LHKFRIDPRSGV 109
                P  IQ G+    +VK++A D D  +N EITYS+   S++     L KFRI+P +G 
Sbjct: 2021 MAQVPSLIQPGQT---LVKVQAHDLDENLNGEITYSLKSGSSSLKGNQLGKFRINPHTGA 2077

Query: 110  IETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV--FQQNTYDVN 163
            +  T  L   AG    + + A D G   K S+ ++E+ V   P    P+  FQ +TY + 
Sbjct: 2078 LSATQSLASEAGHLIQLEIMARDKGNPSKFSEGLIELMVGDQP-VDQPILRFQNDTYRIK 2136

Query: 164  VSEGA 168
            + E A
Sbjct: 2137 LKENA 2141



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEA-RRQIVKIEATD 77
           +  VIAR+    A S   ++ V ++D+NDN P        + I   E   R I+K+ A+D
Sbjct: 538 QLTVIARDGGQPALSSSATVLVTIHDVNDNEPIFDQSFYNVTIAENEPIGRCILKVSASD 597

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y++       L +F +   SG I   G+L   ++  Y   V ATD GG S
Sbjct: 598 PDCGVNAMVNYTLGE-GFKHLTEFEVRSASGEICIAGELDYEQRSSYEFPVLATDRGGLS 656

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
           +  ++++ +    + R PVF    Y+V++ E  S +S
Sbjct: 657 TTAMIKMQLTDINDNR-PVFYPREYNVSLKEFQSQSS 692



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 21/182 (11%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDND 79
            V AR+    + S  +++ V++ D+NDN P         +   E R    QI+++ ATD D
Sbjct: 972  VTARDAGTPSLSSNLTILVDVQDVNDNPPLFER-DEYAVNISEVRPVNTQIIQVNATDRD 1030

Query: 80   LGVNAEITYSI-------------YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
             G NA +TY I             + +S+   H F + P SG +     L     ++Y +
Sbjct: 1031 TGNNARLTYRIVDAGVDNVSISNSHALSDISQH-FGVFPNSGWLYLRSPLDREQRDRYQL 1089

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            TV ATD G  ++Q    + + V   N   P F+++ Y+  + E     S V  +  S L 
Sbjct: 1090 TVMATDNGTPAAQAKTRIVIRVLDANDNDPKFKRSNYEFRIEENMRRGSKVGIVQASDLD 1149

Query: 184  SG 185
             G
Sbjct: 1150 LG 1151



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+ND+AP  R      + +        I  + ATD D GVNA+I YSI    N
Sbjct: 1790 TVVITIGDVNDHAPEFRPGSCYGLSVPENSETSVIHTVVATDLDEGVNADILYSIIG-GN 1848

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSS-QTIVEVSV-VPGPNT 150
             G +KF ID R+G  E + + +  EQ   Y++ VQA+D G  +S Q    +++ V   N 
Sbjct: 1849 LG-NKFSIDARTG--ELSARSLDREQHSRYTLQVQASDRGKPNSLQGQCNITILVEDQND 1905

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F+   Y  N++E A+I S+V  I
Sbjct: 1906 NAPRFELPKYIANIAEDAAIGSSVVRI 1932



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           YLV+    LDR+      +   V+A +K         S+ + + DINDNAP     +   
Sbjct: 414 YLVIVNLPLDRE--TISNYTLSVVATDKGTPPLHATKSIFLRVTDINDNAPEFEHSVYHA 471

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G N+ +TY +     T    F+ID ++G+I T   +  
Sbjct: 472 NVMEVADPGTSVLQVVAHDRDEGNNSVVTYFLAETPETHAQWFQIDSQTGLITTRSHIDC 531

Query: 119 GEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +    +TV A D G    SS   V V+ +   N   P+F Q+ Y+V ++E   I   +
Sbjct: 532 ETEPVPQLTVIARDGGQPALSSSATVLVT-IHDVNDNEPIFDQSFYNVTIAENEPIGRCI 590

Query: 175 ATITVSRLASGCAIM 189
             ++ S    G   M
Sbjct: 591 LKVSASDPDCGVNAM 605



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 14/157 (8%)

Query: 17   GKFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQI 70
            G   +++I R    +    P+       ++L D NDN PR P+   I   A        I
Sbjct: 2796 GARSYELIIRACDSSQQPRPLCSLQPFHLDLYDENDNEPRFPLTEYIHFLAENEPMGTSI 2855

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTG-----LHKFRIDPRSGVIETTG--KLIAGEQYS 123
             + +ATD D G   ++ YS+    +          F IDP+SGV+ ++G       ++Y 
Sbjct: 2856 FRAQATDLDRGPFGQLNYSLAASPSNADGDDEWRLFHIDPQSGVVTSSGVFDYEQRQRYD 2915

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            + ++ATD GGK+++  + V  +   +   P F + TY
Sbjct: 2916 LELRATDMGGKTARVALRVE-IESRDEFQPQFTERTY 2951



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 21/178 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDN----APRLPMIPPIQIQAGEARRQ----- 69
           + F V+A ++ G + +  + +   L DINDN     PR   +   + Q+  ++ Q     
Sbjct: 643 YEFPVLATDRGGLSTTAMIKM--QLTDINDNRPVFYPREYNVSLKEFQSQSSQGQTNSNA 700

Query: 70  -IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG-VIETTGKLIAGEQ---YSI 124
            IV + ATD D G   +++Y I + +  G+  FRI+  +G +     ++++  Q   + +
Sbjct: 701 PIVAVVATDPDSGDFGQVSYRIVNGNEAGI--FRIERSTGEIFVARPEMLSVRQQPKHML 758

Query: 125 TVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + ATD GG   SS  +V +S++     R P+F++  Y+  V E   + + V ++  S
Sbjct: 759 NISATDGGGLRTSSDAMVFLSIIDA-QQRPPIFEKQRYNYQVKEDKPMGTVVGSVMAS 815



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 32/199 (16%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP----------- 51
            +V K  LD +     +++ ++IA +    A ++   LT+ + + NDNAP           
Sbjct: 2458 LVLKRRLDYESQQ--EYQLEIIASDAAHEARTM---LTLRVGNENDNAPVFLAQQPPAYF 2512

Query: 52   -RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
             +LP++            ++V + ATD D    ++I+YSI H +  G   F ++P SGV+
Sbjct: 2513 AQLPLVEDEDDNNLRMDVELVTVNATDADGDDISQISYSI-HPTVIG---FNVNPSSGVV 2568

Query: 111  ETTGKLIAGE---------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNT 159
                  +  E          Y I V A D+G   +SS T+V V        R  +F Q  
Sbjct: 2569 SVNMSRLTSESLSPPSPNGDYFIRVVAQDSGKPKQSSSTLVRVQANRDTGARRSLFLQTQ 2628

Query: 160  YDVNVSEGASINSTVATIT 178
            Y   +SE A + S V  +T
Sbjct: 2629 YRAQISEAAPLGSIVLQLT 2647



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 21/158 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V++ + + D NDN P+     P+      I+ GE    +V   A D D G N +I+YSI 
Sbjct: 1548 VTMRLRVTDANDNPPQFMAPGPLVYVSDAIRIGEVVTHVV---AMDPDKGANGQISYSI- 1603

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKL--IAG-------EQYSITVQATDTGGKSS--QTIV 140
             +S  G  +FRI+  +G IE    L   AG        ++++ ++A D G   S   T+ 
Sbjct: 1604 -LSGNGEGRFRINSETGEIELVKSLPVSAGVDDLDKNGRFNLLIRAADHGQPQSLESTLK 1662

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               VV G ++  P F    Y   + E A   S V  +T
Sbjct: 1663 LQIVVKGSHSHPPRFLSALYRATILENAPSGSFVLQVT 1700



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LVV+++ LDR+     +   + +         S  +++ + + DINDN P  P   P+++
Sbjct: 1398 LVVARQ-LDREVQAEFRLEIRALDMTSNNNPQSSSITVKIEVADINDNPPHWPQ-DPLEL 1455

Query: 62   QAGEARRQ---IVKIEATDNDLGVNAE-----ITYSIYHVSNTGLHK-FRIDPRSGVIET 112
               EA      I    ATD D G NAE     ++YS +H  N  + + F +D  +G +  
Sbjct: 1456 NVSEATSVGTIIYNFTATDADAGHNAELQYRLLSYSPHHYPNESVGEIFAMDSLTGSLSL 1515

Query: 113  TGKLI--AGEQYSITVQATD 130
               L   + ++Y + VQA D
Sbjct: 1516 QSPLDFESIKEYLLVVQALD 1535



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)

Query: 41   VNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + + D+NDNAP       ++I   +  E    +    A D D G + ++TYS+  +S   
Sbjct: 883  IEVEDVNDNAPEFETTS-VRISVPENAELGTPLYAAHAKDKDSGKSGQVTYSLSSLSKKS 941

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
            L+ F ID  SG +  +  L     +++++ V A D G  S  + + + V V   N   P+
Sbjct: 942  LNLFAIDGSSGHLVLSQHLDYEVSQRHTLIVTARDAGTPSLSSNLTILVDVQDVNDNPPL 1001

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F+++ Y VN+SE   +N+ +  +  +   +G
Sbjct: 1002 FERDEYAVNISEVRPVNTQIIQVNATDRDTG 1032



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 16/144 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  +++  V+A +    AA     + + + D NDN P+       + +  E  R
Sbjct: 1079 LDREQRD--RYQLTVMATDNGTPAAQAKTRIVIRVLDANDNDPKFKR-SNYEFRIEENMR 1135

Query: 69   QIVKI---EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
            +  K+   +A+D DLG NA I YS+   +++    F+I P +G I TT + +  EQ   Y
Sbjct: 1136 RGSKVGIVQASDLDLGDNAAIRYSLMPQNSS----FQIQPITGEI-TTKEPLDREQRELY 1190

Query: 123  SITVQATDTGG--KSSQTIVEVSV 144
             + V+A D G   +S++  V + V
Sbjct: 1191 DLLVEARDQGSPQRSARVPVRIHV 1214



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 230 MTVNITIQDVNDNQPIFNQSRYFATVPENSTVGTS---VLQVYASDTDADENGLVEYAIN 286

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRID ++G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 287 RRQSDKEQMFRIDSQTGAIFINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 346

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 347 NDNQPTINVIFLSDDASAKISESAQPGEFVARISV 381


>gi|326927331|ref|XP_003209846.1| PREDICTED: neural-cadherin-like [Meleagris gallopavo]
          Length = 2531

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 17/172 (9%)

Query: 23  VIAREKQGTAASVPVS----LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            + R +    A+VP++    + +N+ D+NDN P     +      +  +    ++++ AT
Sbjct: 707 FLLRVRAQNVAAVPLAAFTTIYINVTDVNDNVPFFTSSIYEASVTEGADIGTFVIQVSAT 766

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---- 130
           D DLG N EITYS+ H  +     FR+D ++G I TT      ++  Y + V++ D    
Sbjct: 767 DLDLGQNGEITYSMLHDHSGDYTCFRLDSQTGSIYTTSVFDREKKGSYLLEVESVDGSES 826

Query: 131 -----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 G  +S T      +   N   PVF Q+ Y+VNV E   + STV T+
Sbjct: 827 ARPGKHGRPNSDTAYVRVFITDVNDNKPVFTQSVYEVNVDEDQDVGSTVITV 878



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 15/195 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
            + + + LDR+      +RF V+A ++ G   +    + +N+ DINDNAP    +P     
Sbjct: 1017 IYAHKVLDRE--ERALWRFVVLATDEGGEGLTGFADVIINVWDINDNAPMFTCMPDDCNG 1074

Query: 61   --IQAGEARRQIVKIEATDND---LGVNAEITYSIY-HVSN-TGLHKFRIDPRSGVIETT 113
               +   A   ++++ A D D   +G+NA +TY+I  +V N  G   F I+P +G I   
Sbjct: 1075 SVFENSPADTLVMEMSAVDRDDPNVGLNAVLTYTITENVKNELGSDMFNINPNTGTIRVA 1134

Query: 114  GKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G +I  E+   Y +TV+A D GG +      + +    N   P F +  +   + E ++I
Sbjct: 1135 GGVIDRERTAIYFLTVEARDGGGLTGTGTATIWIA-DVNDHVPNFTKEMWQAAIPENSAI 1193

Query: 171  NSTVATITVSRLASG 185
            NS +  ++ +    G
Sbjct: 1194 NSEILRVSATDADGG 1208



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 15/161 (9%)

Query: 32  AASVPVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDL 80
           A+  P SLT      V ++D+N+N P        +  A     Q     ++++EATD D 
Sbjct: 393 ASGGPHSLTSTAQVIVKIDDVNNNKPVFQKCHYYREHASVLENQPLGTAVLQVEATDADE 452

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT 138
           G N  + Y + H     L  FRI P +GV+ T       +Q  Y +TV ATD   +    
Sbjct: 453 GANGIVKYGLMHRDGV-LPAFRIHPDTGVLTTVQVFDREKQREYPVTVTATDQAAEPLIG 511

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + +++V +   N   P F+   Y+  + E   + ++   +T
Sbjct: 512 MCQINVLILDQNDNDPRFENTRYEYFLREDTRVGTSFLRVT 552



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 25/174 (14%)

Query: 22  QVIAREKQGTAASVPVSLT----------------VNLNDINDNAPRLPMIPPIQIQAGE 65
           QV  REKQ      PV++T                V + D NDN PR            +
Sbjct: 485 QVFDREKQ---REYPVTVTATDQAAEPLIGMCQINVLILDQNDNDPRFENTRYEYFLRED 541

Query: 66  AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
            R     +++ A D+D   NA ITYSI   +N      +I+P SG I     +       
Sbjct: 542 TRVGTSFLRVTAHDDDYSSNAVITYSI---ANGETDYLQINPTSGWIFVNQPISQRSSII 598

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + ATD G +SS+  + V+V    N + P +++ +Y+V + E  + +++V  I
Sbjct: 599 RDIIATDGGNRSSKVELVVTVTSAKN-QPPQWERGSYEVVIPENTTRDASVLRI 651



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 8/137 (5%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
           K G   S    + V + D+NDN P     +  + + +  +    ++ + A D D G NA+
Sbjct: 831 KHGRPNSDTAYVRVFITDVNDNKPVFTQSVYEVNVDEDQDVGSTVITVNANDEDEGTNAK 890

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVS 143
           + Y I    NTG     + P +G I     L   E   Y I + A+D  GK     V + 
Sbjct: 891 LRYQIT-AGNTG-GVLGVQPETGAIFIAQPLDYEETKIYEIHLLASD--GKWEDYAVTII 946

Query: 144 VVPGPNTRSPVFQQNTY 160
            V   N  SPVF  N Y
Sbjct: 947 NVMNKNDESPVFSINEY 963



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)

Query: 41   VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + + D+ND+ P     M      +      +I+++ ATD D G NA +T+SI  +     
Sbjct: 1166 IWIADVNDHVPNFTKEMWQAAIPENSAINSEILRVSATDADGGENAHLTFSI--IRGDPD 1223

Query: 99   HKFRI----DPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQT-IVEVSVVPGPN 149
             KF I    + +   I    KL        Q+++T++  D    S+ T ++EV      N
Sbjct: 1224 QKFYIENDKEWQCATIRLKKKLDFEKAHERQFNLTIKVEDLDFSSTATCLIEVE---DSN 1280

Query: 150  TRSPVFQQNTYDVN-VSEGASINSTVATITVSRLASG 185
              SPVF       + V E   + +TV T+  +   SG
Sbjct: 1281 DHSPVFHSQLIQTSPVFENMPVGTTVTTVRATDKDSG 1317



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 22/165 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA-- 66
           LD + PN   + F ++A +K     +   ++ ++++++ND AP           + +A  
Sbjct: 270 LDYERPN-HLYEFIIMAVDKGEDPKTGTATVRIHVSNVNDEAPEFSQTIYRSFVSEDAGP 328

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK---LIAGEQYS 123
              +  + A D D      +TY I   +  G   F +DP+ G++         + G +Y 
Sbjct: 329 NTLVATVNAVDPD---GDGVTYDIPSGNQKG--NFIVDPKKGLVRLRSSPFPKLQGTEYV 383

Query: 124 ITVQATD---TGGKSS-----QTIVEVSVVPGPNTRSPVFQQNTY 160
           + V ATD   +GG  S     Q IV++  V   N   PVFQ+  Y
Sbjct: 384 LNVTATDDNASGGPHSLTSTAQVIVKIDDV---NNNKPVFQKCHY 425


>gi|156361309|ref|XP_001625460.1| predicted protein [Nematostella vectensis]
 gi|156212295|gb|EDO33360.1| predicted protein [Nematostella vectensis]
          Length = 460

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 81/143 (56%), Gaps = 13/143 (9%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ DINDN P+ P  P  +I+  E  R+   I+ ++ATD D G+NA++ YSI + ++ G
Sbjct: 1   ISILDINDNRPKFPQ-PYNKIEITEGTRESTMILTLQATDADSGMNAKLVYSILNTTSNG 59

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTR 151
              F +DP +GV+ T+ +L      +Y++T+   D+G      +   IV ++V+   N  
Sbjct: 60  --TFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQPAIVSITVL-DENDN 116

Query: 152 SPVFQQNTYDVNVSEGASINSTV 174
            PVF Q  Y V++ E  ++ + +
Sbjct: 117 VPVFDQEVYSVSIPENITVGAHI 139



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 13/161 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEA-RRQIVKIEAT 76
           + F+V A +      +   S+ + + D+NDN P  LP    +Q+    A    + ++ A+
Sbjct: 191 YSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTTVTQLTAS 250

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
           D D  +N ++ +SI   ++ G  KF ID  +GV+ TT K +  E   +Y++ +QATD G 
Sbjct: 251 DLDSSLNGKVLFSILEGNSDG--KFSIDQNTGVV-TTNKSLDYEDVTEYTLVIQATDCGD 307

Query: 134 ---KSSQ-TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
               SSQ  ++ VSVV   N  SPVF Q  Y  ++ E  ++
Sbjct: 308 PPLNSSQPGMLHVSVV-NINDNSPVFSQKIYSASIDENTTV 347



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 33  ASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQ-IVKIEATDNDLGVNAE--ITY 88
           +S P  L V++ +INDN+P     I    I         I++++ATD D  VN+   + Y
Sbjct: 312 SSQPGMLHVSVVNINDNSPVFSQKIYSASIDENTTVGHVILRVQATDRD-HVNSSSILVY 370

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVS 143
           SI + ++ G   F +DP +GV+ T+ +L      +Y++T+   D+G     ++QT     
Sbjct: 371 SILNTTSNG--TFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQTATVSI 428

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V   N   PVF Q  Y V++ E  ++ + +
Sbjct: 429 TVLDENDNVPVFDQEVYSVSIPENITVGAHI 459



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 70/172 (40%), Gaps = 33/172 (19%)

Query: 33  ASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           A+ P  +++ + D NDN P        +  P  I  G     I+ + A D D GVNAEI 
Sbjct: 100 AAQPAIVSITVLDENDNVPVFDQEVYSVSIPENITVGA---HILLLNARDKDEGVNAEIR 156

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--------QYSITVQATDTG-----GK 134
           Y         L    +  R  + +TTG++   +         YS  V A+D G     G 
Sbjct: 157 Y--------FLKDAIVSKRFSMNDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGS 208

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           SS  I  + V    N   P F    Y V + E  +I +TV  +T S L S  
Sbjct: 209 SSVRITIIDV----NDNRPYFLPTRYYVQLVENVAIGTTVTQLTASDLDSSL 256


>gi|51092277|ref|NP_932785.1| protocadherin alpha 2 precursor [Mus musculus]
 gi|13876258|gb|AAK26049.1| protocadherin alpha 2 [Mus musculus]
 gi|162318310|gb|AAI56387.1| Protocadherin alpha 2 [synthetic construct]
 gi|225000988|gb|AAI72669.1| Protocadherin alpha 2 [synthetic construct]
          Length = 948

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P  +  +
Sbjct: 193 FLVLGK-SLDRE--EDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 249

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A   +V K+ A+D D G N+EI YS+   VS+T   KF+IDP SG + T G+L 
Sbjct: 250 QLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELD 309

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E+  Y I V A+D G  +     ++SV +   N  +P     +  + V E A + + +
Sbjct: 310 YEERTSYEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGAVI 369

Query: 175 ATITVSRLASG 185
           A I+VS   SG
Sbjct: 370 ALISVSDRDSG 380



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 7/165 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QVIA +K   A S    ++V L DINDN P + +     P+Q  A      I  I  
Sbjct: 316 YEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENA-PLGAVIALISV 374

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     A   Y + V A D G  
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPFKLVSTFK-NYYSLVLDSALDREATADYKVMVTARDGGSP 433

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           S +    VSV V   N  +PVF Q  Y V V E     + + T++
Sbjct: 434 SLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVS 478



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 22/183 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   +  G +  ++V       
Sbjct: 531 LQFQVTARDAGVPALGSNVTLQVFVLDENDNAPLL--LPQGAVGVGGSVSELVPRSVGSG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--IAGEQYSI 124
               K+ A D D G NA ++Y +   S  G+   FR+   +G I TT  L  +   +  +
Sbjct: 589 HVVTKVRAVDADSGYNAWLSYELQ--STVGMRSLFRVGLYTGEISTTRALDEVDAPRQRL 646

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V   D G  S      V V    N+++P     T    + + A   +++ T+ V  + +
Sbjct: 647 LVLVKDHGEPSLTATATVLVSLVENSQAP----KTSSRALVDAAGQEASLVTVNVYLVIA 702

Query: 185 GCA 187
            CA
Sbjct: 703 ICA 705



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 9/153 (5%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTG 97
           V + DINDN PR PM     IQ  E+R    +     A+D D+GVNA ++Y +       
Sbjct: 121 VEVRDINDNPPRFPMTEKT-IQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFF 179

Query: 98  LHKFRIDPRS-GVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           L     D  S  +    GK +  E   +  + + ATD G       V++ + V   N   
Sbjct: 180 LDVQTSDELSQSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNE 239

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 240 PTFPQSVYKVQLLENTANGTLVMKLNASDADEG 272


>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
            leucogenys]
          Length = 4585

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2545 IFTLEKLDRETPAEKVISVRLMAKDDGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2602

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA++TY+I   S +      I+  SGV+ T   LI   
Sbjct: 2603 GSSAAKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGVVTTKESLIGLE 2662

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2663 NEFFTFFVRAADNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTYTVSEDVPIGTEIDLI 2722



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3212 TVVVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3266

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V++ V   N
Sbjct: 3267 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDIN 3326

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3327 DNTPVFSQDTYTAVISEDAVLEQSVITV 3354



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1545 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1603

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + +   +  SP
Sbjct: 1604 G-NSFVIDPVLGSIKTAKELDRSNQVEYDLMVKATDKGSPPMSEITSVRIFITIADNASP 1662

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE  SI S V  +T    +S
Sbjct: 1663 KFTSKEYSVEISETVSIGSFVGMVTAHSQSS 1693



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2973 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3027

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G + T+  
Sbjct: 3028 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELRTSTP 3081

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3082 LDREEQAVYHLLVRATDGGGRFCQASV-VLTLEDVNDSAPEFSADPYAITVFE 3133



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP            R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRDRNAKREPLYRVIATDKDDGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSRRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 9/167 (5%)

Query: 7    ENLDR-DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQA 63
            E  DR D  +   +   V A ++     S  + + + + D+NDNAP+   P+  P  ++ 
Sbjct: 1092 ETSDRLDHESTSHYWLTVFATDQGVVPLSSFMEIYIEVGDVNDNAPQTSEPVYYPEIMEN 1151

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  +V+IEA D D   + ++ Y I   +  G   F I P++G+I TT + +  EQ  
Sbjct: 1152 SPKDVSVVQIEAFDPDSSSSDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDREQQD 1209

Query: 122  -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             + + V  TD+G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1210 EHILEVTVTDSGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ + L D+ND+AP     P      +  E    + +++ATD 
Sbjct: 3090 YHLLVRATDGGGRFCQASVVLTLEDVNDSAPEFSADPYAITVFENTEPGTLLTRVQATDA 3149

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3150 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3206

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3207 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3249



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ +N+ DINDN P         + + +A
Sbjct: 3288 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDA 3345

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3346 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPIRGEVKVT-KLLDRETISG 3402

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3403 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3462



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR  Q      ASV VS+ V   D NDN+P     P     ++      ++++I
Sbjct: 2771 YQFSILARCTQDDHEVVASVDVSIQVK--DANDNSPVFESSPYEAFIVENLPGGSRVIQI 2828

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N+++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2829 RASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASD 2888

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2889 HGEKIHLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2926



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2371 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDADKLQY 2424

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2425 SI--LSGNDHKHFVIDSATGIITLSNLRRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2481

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2482 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDRDSG 2519



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD+D  
Sbjct: 2258 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDSDSE 2310

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS 
Sbjct: 2311 PNRGISYHMFGNLSKSHDHFHVDSNTGLISLLRTLDYEQSRQHTIFVRAVDGGMPPLSSD 2370

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F+Q  Y+  +SE A
Sbjct: 2371 VIVTVDVT-DLNDNPPLFEQQIYEARISEHA 2400



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLM---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTG 132
            ++TV+A D G
Sbjct: 998  NLTVRAKDKG 1007



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRI   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FRIGEETGVIETSDRLDHESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVVPG------PNTRSPVF 155
            ATD G     + +E+ +  G      P T  PV+
Sbjct: 1111 ATDQGVVPLSSFMEIYIEVGDVNDNAPQTSEPVY 1144



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2508 VMEVKTTDRDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2564

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2565 LMAKDDGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2623



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 17/138 (12%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQ----TIVEVSVVPGP 148
           T    F ID  +GV++    L   +  E Y + ++A D   +  Q     I++VS +   
Sbjct: 867 T----FSIDSVTGVVKIARPLDRELQHEHY-LKIEARDQAREEPQLFSTVILKVS-LEDV 920

Query: 149 NTRSPVFQQNTYDVNVSE 166
           N   P F    Y V V E
Sbjct: 921 NDNPPKFIPPNYRVKVRE 938



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1831 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1890

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    A++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1891 KGVKVITVNATDADSSAFAQLIYSITE-GNIG-DKFSMDYKTGALTVQNTTQLRSRYELT 1948

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1949 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAKTLAVIT 1999



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 22/166 (13%)

Query: 26   REKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDND 79
            R   G   ++   + + + D ND+ P+        +IP    +      +I++I A D D
Sbjct: 1426 RVDTGRTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIP----EDTAPETEILQISAVDQD 1481

Query: 80   LGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
                 E    IY + ++     L KFR+DP +G + T+ KL   A  Q+++TV   D   
Sbjct: 1482 -----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVMVRDQDV 1536

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               +    + V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1537 PVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1582



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +  +H       
Sbjct: 2070 DRNDNAPVFVNLPYYAIVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHH------E 2122

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I P  G I    +       ++Y + V A D G    S++ IV ++V+   N   PV
Sbjct: 2123 HFQIGPL-GEISLKKQFELDTLNKEYLVAVVAKDGGNPAFSAEVIVPITVM---NKAMPV 2178

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   ++E   ++S V  +
Sbjct: 2179 FEKPFYSAEIAENIQVHSPVVHV 2201



 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N     F Q
Sbjct: 1707 FDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDNCQFFMQ 1764

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   + E ASINS V T
Sbjct: 1765 AEYTGLIVESASINSVVLT 1783


>gi|223461503|gb|AAI41391.1| Pcdha2 protein [Mus musculus]
          Length = 902

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P  +  +
Sbjct: 193 FLVLGK-SLDRE--EDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 249

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A   +V K+ A+D D G N+EI YS+   VS+T   KF+IDP SG + T G+L 
Sbjct: 250 QLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELD 309

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E+  Y I V A+D G  +     ++SV +   N  +P     +  + V E A + + +
Sbjct: 310 YEERTSYEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGAVI 369

Query: 175 ATITVSRLASG 185
           A I+VS   SG
Sbjct: 370 ALISVSDRDSG 380



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 7/165 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QVIA +K   A S    ++V L DINDN P + +     P+Q  A      I  I  
Sbjct: 316 YEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENA-PLGAVIALISV 374

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     A   Y + V A D G  
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPFKLVSTFK-NYYSLVLDSALDREATADYKVMVTARDGGSP 433

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           S +    VSV V   N  +PVF Q  Y V V E     + + T++
Sbjct: 434 SLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVS 478



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 22/183 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   +  G +  ++V       
Sbjct: 531 LQFQVTARDAGVPALGSNVTLQVFVLDENDNAPLL--LPQGAVGVGGSVSELVPRSVGSG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--IAGEQYSI 124
               K+ A D D G NA ++Y +   S  G+   FR+   +G I TT  L  +   +  +
Sbjct: 589 HVVTKVRAVDADSGYNAWLSYELQ--STVGMRSLFRVGLYTGEISTTRALDEVDAPRQRL 646

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V   D G  S      V V    N+++P     T    + + A   +++ T+ V  + +
Sbjct: 647 LVLVKDHGEPSLTATATVLVSLVENSQAP----KTSSRALVDAAGQEASLVTVNVYLVIA 702

Query: 185 GCA 187
            CA
Sbjct: 703 ICA 705



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 9/153 (5%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTG 97
           V + DINDN PR PM     IQ  E+R    +     A+D D+GVNA ++Y +       
Sbjct: 121 VEVRDINDNPPRFPMTEKT-IQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFF 179

Query: 98  LHKFRIDPRS-GVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           L     D  S  +    GK +  E   +  + + ATD G       V++ + V   N   
Sbjct: 180 LDVQTSDELSQSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNE 239

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 240 PTFPQSVYKVQLLENTANGTLVMKLNASDADEG 272


>gi|116283803|gb|AAH30897.1| Pcdha6 protein [Mus musculus]
          Length = 926

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P  +  +
Sbjct: 193 FLVLGK-SLDRE--EDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 249

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A   +V K+ A+D D G N+EI YS+   VS+T   KF+IDP SG + T G+L 
Sbjct: 250 QLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELD 309

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E+  Y I V A+D G  +     ++SV +   N  +P     +  + V E A + + +
Sbjct: 310 YEERTSYEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGAVI 369

Query: 175 ATITVSRLASG 185
           A I+VS   SG
Sbjct: 370 ALISVSDRDSG 380



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 7/165 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QVIA +K   A S    ++V L DINDN P + +     P+Q  A      I  I  
Sbjct: 316 YEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENA-PLGAVIALISV 374

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     A   Y + V A D G  
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPFKLVSTFK-NYYSLVLDSALDREATADYKVMVTARDGGSP 433

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           S +    VSV V   N  +PVF Q  Y V V E     + + T++
Sbjct: 434 SLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVS 478



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 22/183 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   +  G +  ++V       
Sbjct: 531 LQFQVTARDAGVPALGSNVTLQVFVLDENDNAPLL--LPQGAVGVGGSVSELVPRSVGSG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--IAGEQYSI 124
               K+ A D D G NA ++Y +   S  G+   FR+   +G I TT  L  +   +  +
Sbjct: 589 HVVTKVRAVDADSGYNAWLSYELQ--STVGMRSLFRVGLYTGEISTTRALDEVDAPRQRL 646

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V   D G  S      V V    N+++P     T    + + A   +++ T+ V  + +
Sbjct: 647 LVLVKDHGEPSLTATATVLVSLVENSQAP----KTSSRALVDAAGQEASLVTVNVYLVIA 702

Query: 185 GCA 187
            CA
Sbjct: 703 ICA 705



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 9/153 (5%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTG 97
           V + DINDN PR PM     IQ  E+R    +     A+D D+GVNA ++Y +       
Sbjct: 121 VEVRDINDNPPRFPMTEKT-IQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFF 179

Query: 98  LHKFRIDPRS-GVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           L     D  S  +    GK +  E   +  + + ATD G       V++ + V   N   
Sbjct: 180 LDVQTSDELSQSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNE 239

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 240 PTFPQSVYKVQLLENTANGTLVMKLNASDADEG 272


>gi|395821589|ref|XP_003784120.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Otolemur
           garnettii]
          Length = 2919

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  N   FR  V  ++      S   +LT+ + D ND+ P        Q +
Sbjct: 239 VTTAEELDRETKNTHVFR--VTVQDHGMPRRSALATLTIMVTDTNDHDPVFE-----QQE 291

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D  +NA I Y +   +  +    F IDPRSGVI T G
Sbjct: 292 YKESLRENLEVGYEVLTVRATDGDAPLNANILYRLLEGIGGSPSEVFEIDPRSGVIRTRG 351

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 352 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 411

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 412 PGAPVLRVTAS 422



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 779 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 830

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 831 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRA 889

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 890 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 944



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 574 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 632

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 633 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 683

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 684 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 740



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 696 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 750

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 751 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 809

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 810 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 843



 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLG 81
            R+    +A+  V L+V   D NDNAP+      + +Q  E       ++++ A+D D G
Sbjct: 371 GRDPGPRSATAAVFLSVE--DDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKG 427

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSS 136
            NA + YSI  +S     +F +D ++G ++    L     ++Y++ V+A D G     + 
Sbjct: 428 SNALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNV 485

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +V V V+   N  +P+F    +   V E   +   V
Sbjct: 486 SGLVTVQVL-DINDNAPIFVSTPFQATVLESVPLGYLV 522



 Score = 38.1 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 870  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 927

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 928  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 985

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 986  DRPEYVLVIQATSAPLVSRATV 1007


>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
 gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
          Length = 4534

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 9/171 (5%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            ++NLDR+      + F V   +      S   ++ +N+ DINDN P   +          
Sbjct: 3077 EKNLDRE--TISLYNFTVKVEDFGKPILSSVANIVINILDINDNPPEFSLRQYKSHMYEN 3134

Query: 66   ARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
              R  ++ KI AT  D+GVNAEI Y  Y +S     KF I+  +GV+   G +     + 
Sbjct: 3135 VTRGSEVCKIHATSKDIGVNAEILY--YIISGNEQQKFNINSSTGVLWVNGTVDYEKSKF 3192

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
            Y +TVQA D G      I  V++ +   N  +P F QN Y  +V E  S+N
Sbjct: 3193 YFLTVQAIDGGSPPFSNIAYVNITIEDVNDNTPTFTQNIYRTSVREDISVN 3243



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 7/117 (5%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V++ DINDN+P     +  +Q+         I ++ A DND G N  ITYSI   S  
Sbjct: 1136 VVVSVLDINDNSPVFDQRVYKVQVPSTTYINESIFQVHAIDNDDGENGRITYSI--KSGK 1193

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVP-GPNT 150
              +KFRID  SG I +T  L    ++ I V+A D G   +S  T+V   V+P  PN+
Sbjct: 1194 KKNKFRIDSYSGHIFSTKPLEPDSEFEINVKAEDNGIPKRSQTTLVHFGVIPVSPNS 1250



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 12/174 (6%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RR 68
            D  +   +   + A++      S  V + + + + NDN P L   P   +   E    + 
Sbjct: 1003 DAESKNFYWLTLCAQDNAIVPFSNCVKVYIEVENENDNIP-LTTKPVYYVNVTEGSSGKN 1061

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
            +I++++A D D+  + +ITYSI  +S   +  F IDP +GV++TT + +  E   ++ + 
Sbjct: 1062 EIIQLKAVDPDIDPSQKITYSI--ISGNLVGYFDIDPNTGVLKTTERKLDRENQAEHILE 1119

Query: 126  VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V  +D G    +S T V VSV+   N  SPVF Q  Y V V     IN ++  +
Sbjct: 1120 VSISDNGSPILTSTTRVVVSVL-DINDNSPVFDQRVYKVQVPSTTYINESIFQV 1172



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 16/194 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-Q 60
           ++ +++ LD +  +        I +   G+       + + + D+NDN P    I  I  
Sbjct: 307 MLYTQKRLDAETKSSYTLTVSAIDQADVGSRKQSSAKVKITVEDMNDNDPIFENINRIIY 366

Query: 61  IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I   E    IV K+ A D D G NA I+YSI   +N     F ID  SGVI+TT  LI  
Sbjct: 367 INENELAGSIVTKLTAKDKDSGENAYISYSI---ANLNEVPFEIDHFSGVIKTTN-LIDY 422

Query: 120 E----QYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQ-NTYDVNVSEGASIN 171
           E     Y++ V+A+D G    + ++  +++ +V   N   P F++ N Y   V + ASI 
Sbjct: 423 ETMRRNYTLLVRASDWGLPYRRQTEIAIDI-IVQNINDNRPQFERVNCYG-KVIKSASIG 480

Query: 172 STVATITVSRLASG 185
           S V TI+   L  G
Sbjct: 481 SEVFTISAIDLDVG 494



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  ++LDR+  +  K+   ++ +++     S    + + ++D+NDNAP    I  +Q  
Sbjct: 783 IVLSKSLDRE--HKDKYELHIVVKDRGSPVLSTEAIVYILVDDVNDNAP----IFGVQEY 836

Query: 63  AGEARRQIVK------IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             + R  + +      IEA D DL  NAEI +S+   +    + F+ID  SG I T G L
Sbjct: 837 MFKVREDVPRGTVVAVIEAIDKDLAQNAEILFSLKEDTQEK-NLFKIDKHSGAIRTEGYL 895

Query: 117 IAGEQ--YSITVQATDTG 132
               +  +++ + A D G
Sbjct: 896 DYENRQVHNLVISAIDCG 913



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 11/146 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + VN++D ND+ P       IQ +A E+     ++V++ A D D G NAEI YSI    N
Sbjct: 1449 IIVNVHDHNDHYPEFTR-KIIQSKAPESAAIGSKLVQVTAIDRDSGQNAEIHYSII-TGN 1506

Query: 96   TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G   F IDP+ G++     L     ++Y + ++A D G    SSQ  V + +V   +  
Sbjct: 1507 VG-SMFEIDPKFGIVYLAASLDINKMQEYMLQIKAVDLGHPPLSSQVPVHI-IVTMSDND 1564

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F  N   + + E   I S V  +
Sbjct: 1565 PPKFFNNFVSLEMFENLGIGSFVTQV 1590



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 12/173 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLT---VNLNDINDNAPRLPMIPPI-QIQAG 64
             DR+  +  K  F+  +    G   S   +LT   +++ DINDN P    +P    +  G
Sbjct: 1939 FDRETQDMYKLYFEAKSTVFSGDNISTRRALTSVYISVLDINDNCPMFVNMPYYASVSVG 1998

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--Q 121
              +  I+ K++A D D   N E+ Y +    N  L  F+ID ++G + +  + I G   +
Sbjct: 1999 FTKGTIILKVKAIDLDSAENGEVRYEL-KKGNGEL--FKIDRKTGEL-SIKQTIEGHNRK 2054

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            Y +TV A D    S  T V V  +   +   PVF++  Y V+V E   + S +
Sbjct: 2055 YDLTVAACDGAVISCCTEVPVQ-IKVIDRSMPVFEKQFYSVSVKEDVEMYSAL 2106



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 10/174 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQIQAGEAR 67
            LDR+     K++     ++ +         + + +NDINDNAP   +    + IQ     
Sbjct: 2976 LDREKI--AKYKLYAHVQDGKEFIRECVSEIIITVNDINDNAPIFSLTNYRVSIQEDAQL 3033

Query: 68   RQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
            + +V K+ ATD D G+N +I YS+   + T    F I   +G+I+    L       Y+ 
Sbjct: 3034 QTLVTKVHATDKDFGMNRKIKYSL---TGTNSDYFGISKSTGIIKLEKNLDRETISLYNF 3090

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            TV+  D G     ++  + + +   N   P F    Y  ++ E  +  S V  I
Sbjct: 3091 TVKVEDFGKPILSSVANIVINILDINDNPPEFSLRQYKSHMYENVTRGSEVCKI 3144



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 11/145 (7%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNT 96
           L + + D NDN P L   +  +++     +  IV    ATD D+G+NAEITYS+    + 
Sbjct: 714 LPITITDANDNPPVLQKSLATLRLTENAPKGSIVYCAHATDADVGINAEITYSL----SV 769

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
              +F I+  +G I  +  L     ++Y + +   D G    S++ IV + +V   N  +
Sbjct: 770 EFKEFTINKTTGCIVLSKSLDREHKDKYELHIVVKDRGSPVLSTEAIVYI-LVDDVNDNA 828

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           P+F    Y   V E     + VA I
Sbjct: 829 PIFGVQEYMFKVREDVPRGTVVAVI 853



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 15/151 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVNAEITYSIYH 92
            + + + D+NDN P         I     R  I      + ++ATD D  +N  I Y+I  
Sbjct: 3213 VNITIEDVNDNTPTFTQ----NIYRTSVREDISVNLPIIDVKATDEDSNLNGIIKYNI-- 3266

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            V    L +FRI+  +G I     L       Y + VQA D G       V+V++ +   N
Sbjct: 3267 VKGDSLSQFRINHSNGTISLARPLDRETISDYVLEVQACDFGIPERCNSVQVNICILDAN 3326

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +P+F Q  Y + + E   +        VS
Sbjct: 3327 DNAPIFSQTNYSIVLQENRPLGYVFIKFDVS 3357



 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-----SLTVNLNDINDNAPRLP-MI 56
            ++  + LDR+  +     + VI  E     A++PV      + +++ D NDN P+    I
Sbjct: 2660 LILMQTLDREQNDS---HYLVIVAE----TATLPVLFAYAEVYIHVTDENDNYPKFDNTI 2712

Query: 57   PPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
               ++ +  E    I+K+ ATD D G N ++ Y     SN     F ID  +G I     
Sbjct: 2713 YSCEVAENTEKVASILKVTATDADTGSNGDVRYYFDEESNGIRSIFDIDIYTGWITLLSS 2772

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            L      +Y++ V ATD G     + V VS+ +   N   P F+     + +SE A
Sbjct: 2773 LDREVQSEYNLKVIATDNGHPKHDSKVPVSIKIIDYNDNGPQFKLPMDHIYISETA 2828



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 20/141 (14%)

Query: 41   VNLNDINDNAPRLPMIPPI-----------QIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            V++ D+NDN P+      I            +Q  + +++ + + A D D+G+N  + Y 
Sbjct: 1654 VHVLDVNDNVPKFLQTEYIGTLSESANLGSYVQKVDEKKRHLTVNAFDADVGLNGMLQYK 1713

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV--- 144
            I  + +   + F+ID  +G IE    L   ++  YS  V  +D G  S  +  +  V   
Sbjct: 1714 I--LDDLAKNVFKIDSTTGAIEILRSLDYEKKSNYSFFVTVSDMGKPSLHSTTKAHVVIL 1771

Query: 145  VPGPNTRSPVFQQNTYDVNVS 165
            V   N   PVF+    D+NV+
Sbjct: 1772 VTNVNDCPPVFKDR--DLNVT 1790



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           IEA D DLG N ++ ++I       +  FRIDP SG ++  G L      +Y + +   D
Sbjct: 645 IEARDRDLGYNGKLVFAIADGDFDSV--FRIDPDSGELQIIGYLDRERLSEYILNITVYD 702

Query: 131 TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            G   KS   I+ +++    N   PV Q++   + ++E A   S V
Sbjct: 703 LGHPAKSDSKILPITITDA-NDNPPVLQKSLATLRLTENAPKGSIV 747



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +++++ +D DLG  A +   +   +  G  +FRI+P SG++ T  +L A  +  Y++TV 
Sbjct: 270 VIRLKVSDPDLGKYALVYLEVVGGNEGG--EFRINPDSGMLYTQKRLDAETKSSYTLTVS 327

Query: 128 ATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           A D    G   Q+  +V + V   N   P+F+     + ++E     S V  +T     S
Sbjct: 328 AIDQADVGSRKQSSAKVKITVEDMNDNDPIFENINRIIYINENELAGSIVTKLTAKDKDS 387

Query: 185 G 185
           G
Sbjct: 388 G 388



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
              I+K+ A D DLGVN EI YS    S +    F + P +G I    +L   E   Y +
Sbjct: 50  HHSILKVIADDADLGVNGEIYYSFLIDSES----FAVHPTTGDITILKQLNYAENSHYEL 105

Query: 125 TVQATDTGGKSSQ 137
           TV A D G    Q
Sbjct: 106 TVLANDRGCAIHQ 118



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
             +++ ++A D+D G  A + Y I  VS      F I+  +G+I +         ++Y + 
Sbjct: 2416 HEVITVKAVDDDFGQYASLYYEI--VSEEMKQYFEINRNTGLITSKVSFDREIKDEYVLQ 2473

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++A D G K     + V+ +   N  SP F    Y + VS   + N T+ T+
Sbjct: 2474 LKAIDGGSKFGFASLRVT-IEDANDNSPHFFLKEYRMVVSSSNNPNETILTV 2524



 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 25/170 (14%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDND 79
            ++   A+   VS+TV    +N NAP +       +IP     +G     IVKI   D D
Sbjct: 117 HQQNHQASKAKVSITVK--QVNLNAPEIYAKTFSSVIP----NSGALIYGIVKI--NDKD 168

Query: 80  LGVNAEI-TYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAGEQ---YSITVQATDT 131
           +G N EI    I   +  G   F++ P        IE        EQ   Y++T++A D 
Sbjct: 169 IGKNGEIRKLEITDGNPDG--TFQLLPAEAKDEYYIELNKFASLNEQQFAYNLTLRAEDF 226

Query: 132 GGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
           G  S  T   V++   P  ++ P+F Q  Y+V++ E A +N  V  + VS
Sbjct: 227 GIPSRSTFKTVTIHILPEIKNVPIFTQEIYEVSIPETAPVNMPVIRLKVS 276


>gi|296193285|ref|XP_002806645.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Callithrix
            jacchus]
          Length = 4349

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HMAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDADTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++ V+ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 PLDRERKDVFNLVVKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 9/173 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            K+   +    K  ++ S   ++ VN+ D+N++ PR P  P     ++       I+ + A
Sbjct: 3286 KYFLSIECTRKSSSSLSDITTVVVNITDVNEHRPRFPQDPYNTRVLENALVGDVILTVSA 3345

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N++ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3346 TDEDGPLNSDITYSL--VGGNQLGHFIIHPKKGELQ-VAKALDWEQASSYSLKLRATDSG 3402

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
                    ++++ V   N   P F Q  Y   V E + I S V  + +S L S
Sbjct: 3403 QPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQENSPIGSKVLQLILSDLDS 3455



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V + DINDN P         RLP  + P+      +   + ++ A+D D G+N  +TY
Sbjct: 1228 VVVGILDINDNPPAFSHKLFNVRLPERLSPV------SPGPVYRLVASDLDEGLNGRVTY 1281

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +GV+ ++    AGE   +T++ATD G    S+   + +  +P
Sbjct: 1282 SIEESDEEG---FSIDPVTGVVSSSSIFTAGEYNILTIKATDNGQPPLSASVRLHIEWIP 1338

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1339 RPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1373



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  ITY+         
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAITYTF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLRKPFDYQALNKYRLKVIARDGGMPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVIDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +    ++ +H+ F ID  SG I T  +L     + Y+  V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPSSNVHELFAIDSESGWITTLQELDCETCQTYNFHVVAYDHGR 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVIENSEPGELVATL 2928



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 11/153 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++ +   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVVKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGPNAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             S+ + V VSVV G     PVF    + V V E
Sbjct: 3198 LSTLSTVTVSVV-GLEDYLPVFLNTEHSVQVPE 3229



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q+ Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQSQYEANVSELATCGHLVLRV 2401



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 7/119 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ A D D G NAE+ Y++   +  G   F I+   G+I    KL       +++TV
Sbjct: 1573 ELLQVRAMDADRGANAEVRYTLLKGNGEGF--FNINALLGIITLARKLDWANHAPHTLTV 1630

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +A D G      +  V +   P+ RS P+F +  Y V + E   + S +  + VS ++S
Sbjct: 1631 KAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKTEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASAYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSI--TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E  +I   ++A D G    +SQ  V + VVP      P F +  Y    SE     S +
Sbjct: 2652 LENRTIDFIIKAQDGGPPHWNSQVPVRLQVVPK-KVSLPKFSEPLYTFPASEDLPEGSEI 2710

Query: 175  ATI 177
              +
Sbjct: 2711 GVV 2713



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDTPLKSPICKVTATDADLGQNAEFYYNF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPRKGHQ 904



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R +VIAR+  G   S+     V +   N + P L   P  +++  E       I  T 
Sbjct: 2138 KYRLKVIARD--GGMPSLQSEEEVLVTVRNKSNP-LFQSPYYKVRVPENITLYTPILHTQ 2194

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GK 134
                    + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G 
Sbjct: 2195 ARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGS 2252

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S+  VEV +V   N   P F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2253 FSEATVEV-LVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKL---IAGEQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL       Q+++
Sbjct: 1466 ELLRVQAIDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLRSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVENGNLHPPYFTQLHYEASVPD 1566



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 15/117 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++        ETT   I    
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTIAAPLDYETTNFYIL--- 788

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV    T  KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 789 -NVTVYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 29/159 (18%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR+  ++G        L V L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPQYILKVEARDQPRKGHQLFSVTDLIVTLEDVNDNSPQCITELNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV 109
            L +   +PP  +        +  ++A+D DLG   E+ Y +    +     FR+D  +G 
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRYVLM---DDAHGTFRVDLTTGA 980

Query: 110  IETTGKLIAGEQ--YSITVQATDTGGK-SSQTIVEVSVV 145
            +    +L    +  Y++++ A+D+G   + +T+  V V+
Sbjct: 981  LSLERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVI 1019


>gi|427779553|gb|JAA55228.1| Putative cadherin egf lag seven-pass g-type receptor [Rhipicephalus
           pulchellus]
          Length = 2970

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 22/187 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAPR  + P  Q   
Sbjct: 544 LAKELDYEDLRQPKSYSLIVTATEDSG-GFSTSVELTIKVTDVNDNAPRFEL-PDYQAHN 601

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+++ ATD D G NAE+TYS+          F ID R GV+ +  +L
Sbjct: 602 VDEDIAVGTS---ILQVSATDMDTGRNAELTYSL------DKEDFTIDSR-GVVYSNRRL 651

Query: 117 IA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            A     Y +TV+ATD G         + +     N  +P F Q+ Y  NV E A  ++ 
Sbjct: 652 DADVNNTYVLTVRATDRGEPPLTGTATIRIYTENKNDEAPKFSQDVYTPNVDENAGPSTL 711

Query: 174 VATITVS 180
           V T+  S
Sbjct: 712 VTTVVAS 718



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 12/174 (6%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            LDRD P+   ++RF V A ++ G        + VNL D+NDNAP  P  +      + G 
Sbjct: 1419 LDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIYTGNVTENGT 1478

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A   ++ + ATD D    G NA + YSI    V+  G   F ID  +GVI T    +  E
Sbjct: 1479 AGMTVMTMTATDYDDPNEGNNARLAYSIEQNQVNENGELIFTIDEETGVISTAVCCLDRE 1538

Query: 121  ---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
               +Y+I V A D GG        +  +   N   P F +  + V+V E  + N
Sbjct: 1539 TNPEYTIKVVAVDGGGLKGTGTATIK-IKDINDMPPEFTKKDWFVDVEETEADN 1591



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 20/188 (10%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLT----VNLNDINDNAP---RLPMIP 57
           +LD+D     K+   V AR+        A  P + T    V + D+NDN P         
Sbjct: 756 HLDKD-----KYELNVTARDDGACCRNGALTPHTSTALVVVFITDVNDNKPVFEECQTYT 810

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P   +  ++   ++K++A D D G N ++ YSI    N    KF +D  +G I T     
Sbjct: 811 PKVEEGAQSGTSVIKVKARDLDKGHNGQVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFD 870

Query: 118 A----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +   +  
Sbjct: 871 REGDDGRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEYRENVKQDTQVGI 930

Query: 173 TVATITVS 180
            +  ++ S
Sbjct: 931 HILRVSAS 938


>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
            [Megachile rotundata]
          Length = 4739

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT     V SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 3251 QGTPQLTSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTE----VARVLATSKDTG 3306

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            VNA++ YSI  V      KF+ID RSGVI    +L       Y +T+QA D G    S+ 
Sbjct: 3307 VNADVYYSI--VGGNEHKKFQIDARSGVITIAEQLDYERARDYFLTIQAIDGGIPPLSNH 3364

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V+   N  +P+F + +Y  +V E A I   V  +  + L S
Sbjct: 3365 ATVNITVIDS-NDNAPIFSEVSYRASVREDAKIGEKVTQVFANDLDS 3410



 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 16/150 (10%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L V + D+NDNAP+    +   +I +       + +  ATD D G NA +TYS+   +N 
Sbjct: 865  LPVTVLDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADTGENARVTYSLVTETN- 923

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT-------IVEVSVVPG 147
                FR+DP +GV+   G+L    Q  Y + ++A D GGK + T       +V V+ V  
Sbjct: 924  ---DFRVDPVTGVLSVFGRLDRERQEIYELRIRARDNGGKGTDTPPLYSDALVRVT-VDD 979

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  +P F  ++Y V + E   I + VA +
Sbjct: 980  VNDNAPTFALSSYTVKIREDVPIWTVVAVV 1009



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 10/182 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            +  S   LDR+  N  +   +V  R+    + S    + + + DIND+ P        +Q
Sbjct: 1256 ITTSGRKLDRE--NQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQ 1313

Query: 61   IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I A     + + ++ A D D+G N +I YSI      G  KF+I P +G++ +     AG
Sbjct: 1314 IPASPSTDKPLFQVLANDKDIGDNGKIQYSI--KGGRGKGKFKIHPTTGMVYSQRGFEAG 1371

Query: 120  EQYSITVQATDTG--GKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            ++Y + ++A D+G   +S QT V V V  VP  +   PVF+ N     V+E   +   VA
Sbjct: 1372 QEYEMMIKAADSGEPQRSHQTRVSVQVVEVPKESENPPVFKTNNQRAEVTESDEVGFLVA 1431

Query: 176  TI 177
             +
Sbjct: 1432 LM 1433



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++K+ + DND G+N ++
Sbjct: 2320 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISVSEAAPFGTSVLKVSSRDNDTGINQQV 2376

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             Y+I + +      F IDP  GVI     L   A E +  TV A D G  S  +   V V
Sbjct: 2377 RYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWV 2436

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 2437 TVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 2473



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+  +  K+      +++   +      L + ++D+NDN P+  M       P  ++ 
Sbjct: 3130 LDRE--SQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNPPKFTMQTYSATLPEDVEV 3187

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATD+D+G+N +I Y     ++    +F I   SG++ T GK +  E   
Sbjct: 3188 GTL---VTKVHATDDDIGINRKIRYEFIDSADG---QFLIAADSGIV-TLGKSLDRETKA 3240

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G     ++  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 3241 MYNVTIQALDQGTPQLTSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLA 3300

Query: 180  SRLASG 185
            +   +G
Sbjct: 3301 TSKDTG 3306



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 5/135 (3%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAG--EARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +T+ + D ND+AP+    P   I A   E    I+KI A D+DLG N E+ YS       
Sbjct: 2846 ITLQVLDENDHAPKFESNPYGIILAENIEEGTSILKIIAHDDDLGSNGEVRYSFGTDIGE 2905

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              + F +D  +G I T  +L   +Q  Y   V ATD G         V V +   N   P
Sbjct: 2906 LANVFTVDAYTGWISTLVQLDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPP 2965

Query: 154  VFQQNTYDVNVSEGA 168
             F  + Y+  V+E A
Sbjct: 2966 AFVDDRYEAAVNEDA 2980



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 10/158 (6%)

Query: 27   EKQGTAASVPVS-LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            + QGT A    + + V ++D ND+AP     +I     +       +V++ A D D G N
Sbjct: 1589 KDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVFETSPVGAAVVQVWAIDRDRGDN 1648

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIV 140
            A+ITYSI    N G + F IDP  GVI    +L   I+ E Y + V+ATD G  +    V
Sbjct: 1649 AKITYSITS-GNVG-NMFSIDPELGVIRVARELDLSISSE-YILLVKATDHGSPALTNTV 1705

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V V V   +   P F Q      + E   + + V  +
Sbjct: 1706 PVHVMVTMADNAPPRFIQKELSAEIYENQQLGTYVKHV 1743



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDND 79
            Q+  REK   A    V + V + DINDN P    +P   + + +A++   I K+ A D D
Sbjct: 2110 QIPDREKPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVDAQKGDVITKVHAVDMD 2166

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQT 138
             G N E+ Y +          F++  ++G I     L     +Y +T+ A D  G S+  
Sbjct: 2167 SGDNGEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD--GGSTPC 2221

Query: 139  IVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVA 175
             +EV+V      RS PVF +  Y  +V E   I+S +A
Sbjct: 2222 SIEVTVNVKVIDRSMPVFDKQFYTDSVLESIEIHSPLA 2259



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 9/131 (6%)

Query: 47   NDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            N + P+ P  P +++   E +   R +  + A D D G    + Y+I   S+     F I
Sbjct: 2543 NRHNPKFPN-PVVEVTVLENQLPGRLVTSVIANDEDFGDYGTVIYTI--ASDLMKEIFDI 2599

Query: 104  DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            +  +G I T  KL   EQ  Y I V ATD GG+S   +V V  V   N  SPVF    Y 
Sbjct: 2600 NRLTGEIVTRKKLDREEQKLYEIPVMATDGGGRSGFVMVRVK-VGDENDNSPVFLLREYK 2658

Query: 162  VNVSEGASINS 172
             ++    ++N+
Sbjct: 2659 ASIYGNLTVNT 2669



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 3/84 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F ++P +G+I    +L   ++  Y++TV AT+  G  +Q  V V V+   N  +P F Q 
Sbjct: 1764 FFVNPSTGIIVIKNELDYEKRKFYNLTVAATNMAGAKAQCNVIVHVL-DRNDNAPKFLQA 1822

Query: 159  TYDVNVSEGASINSTVATITVSRL 182
            TY   +SEGASI S V T T S L
Sbjct: 1823 TYTGEISEGASIGSLVLTNTSSPL 1846



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 12/123 (9%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L     +QY +TV+ATD+  G  ++ 
Sbjct: 2268 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 2325

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC------AIMNKE 192
            +V + V+   N   P F Q++Y+++VSE A   ++V  ++     +G       AI N  
Sbjct: 2326 LVSILVL-DVNDCPPEFTQDSYNISVSEAAPFGTSVLKVSSRDNDTGINQQVRYAIQNDT 2384

Query: 193  ENS 195
            ENS
Sbjct: 2385 ENS 2387



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEATDNDLGVNAEIT 87
           GT       + +N+ D NDN P        + I   E A   +VKI A D D G NA I+
Sbjct: 487 GTRKQSSAKVKINVVDTNDNDPTFEQSEMDVWIDENEPAGTSVVKITAKDRDSGENAYIS 546

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           YSI ++       F IDP SG++ T   L       +Y + V+  D G
Sbjct: 547 YSIDNIQKV---PFEIDPFSGIVRTKQVLDYETMKREYLLHVRVGDWG 591



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        +I  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 3054 VTVQVLDVNDNPPYCLRYRYREILSEGSHPGTYVLTVLATDYDDEPNAKLRFYLTGDNND 3113

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               KF +D  +GV++T G+L    Q  YS+T    D    S +   ++ + +   N   P
Sbjct: 3114 ---KFSLDKETGVLKTVGQLDRESQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNPP 3170

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F   TY   + E   + + V  +
Sbjct: 3171 KFTMQTYSATLPEDVEVGTLVTKV 3194



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           G++ +    +T+ +  +N  AP + +  +P I   +      IV++   D+D GV+ +I 
Sbjct: 271 GSSRASTAKVTIRVRQVNFFAPEIYVQHLPDIVEHSNADIYAIVRV--IDHDEGVHGKIA 328

Query: 88  YSIYHVSNTGLHKFRIDP--RSG-----VIETTGKLIAGEQYSITVQATDTG--GKSSQT 138
            S+  V       FR+ P   SG     V+    +  A + Y++T++A D G   K S  
Sbjct: 329 -SLDIVGGDPAGHFRVRPAXXSGEYNIEVLHLLDRETAAQGYNLTLRAMDRGVPQKFSYK 387

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V V +    N  +PVF +  Y+V V E A IN+ V  + V+    G
Sbjct: 388 FVPVHLA-DLNDNAPVFNREIYEVKVPETAPINTPVIRLKVTDADEG 433



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 25/152 (16%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ ND+N      P+  P + +A         R I+++ A D DLG N EI YS    ++
Sbjct: 176 LDTNDLN------PLFYPTEYEANITEDTSLHRSILRVMAEDADLGRNGEIYYSFAEETD 229

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD------TGGKSSQTIVEVSV-VP 146
               +F + P SGVI  T  L   E+  + + V A D      +GG S  +  +V++ V 
Sbjct: 230 ----QFAVHPVSGVITLTRPLRYSERAIHELVVLAKDRGALFRSGGSSRASTAKVTIRVR 285

Query: 147 GPNTRSP-VFQQNTYDVNVSEGASINSTVATI 177
             N  +P ++ Q+  D+     A I + V  I
Sbjct: 286 QVNFFAPEIYVQHLPDIVEHSNADIYAIVRVI 317


>gi|118790714|ref|XP_318779.3| AGAP009716-PA [Anopheles gambiae str. PEST]
 gi|116118074|gb|EAA14579.3| AGAP009716-PA [Anopheles gambiae str. PEST]
          Length = 1749

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 9   LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           L+RDPP+    ++F V A+++ G        + +NL D+NDNAP+ P  +      + G 
Sbjct: 197 LNRDPPHGRASWKFTVFAQDEGGEGLVGFTEVQINLKDVNDNAPQFPNGIAYGNVTENGT 256

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYHVS---NTGLHKFRIDPRSGVIETTGKLIAG 119
               ++ I+A D D    G NA+I YSI   +   +TGL  F I+P +G+I T    +  
Sbjct: 257 IGMHVMTIKAEDYDDINEGTNAKIIYSIEKNAIQEDTGLKIFDINPDTGLITTAVCCLDR 316

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           E+   YS+ + ATD GG        +  V   N   P F ++ + V V E
Sbjct: 317 EKTSDYSLQIVATDGGGLKGTGTASIK-VKDLNDMPPRFTKDEWYVEVEE 365



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   LDRDPP---NPGKFRFQVIAREKQGTAASVPVS---LTVNLNDINDNAPRL--PMIPPIQ 60
           LD + P   N  + R QVI  ++   +    +    + V L DINDN PR   P I    
Sbjct: 423 LDYEDPMQINGFRVRIQVIDNDEIDESDKYHIDHSWVIVKLKDINDNTPRFNKPHIEAAV 482

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAG 119
            +  +  + +   +A D D G  ++ITYSI   ++    +F ID    V I+      A 
Sbjct: 483 YENADVGKNLGTFKAVDIDKGGKSKITYSINRATDRK-RQFAIDQEGKVTIQRELDREAM 541

Query: 120 EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            ++S+ + ATD G   +++  I+ V +V   N  +PVF ++
Sbjct: 542 AKHSLEILATDDGVPPRTAFAILTV-LVKDINDNAPVFAED 581


>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Bombus
            terrestris]
          Length = 3597

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT   + V SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 2109 QGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTE----VARVLATSKDTG 2164

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            VNA++ YSI  V      KF+ID RSGVI    +L       Y +T+QA D G    S+ 
Sbjct: 2165 VNADVYYSI--VGGNEHKKFQIDARSGVITIAEQLDFERARDYFLTIQAIDGGIPPLSNH 2222

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V+   N  +P+F + +Y  ++ E A I   V  +  + L S
Sbjct: 2223 ATVNITVIDS-NDNAPIFSEVSYRASIREDAKIGEKVTQVFANDLDS 2268



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 10/182 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
           +  S   LDR+  N  +   +V  R+    + S    + + + DIND+ P        +Q
Sbjct: 113 ITTSGRKLDRE--NQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQ 170

Query: 61  IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I A     + + ++ A D D+G N +I YSI      G  KF+I P +G++ +     AG
Sbjct: 171 IPASPSTDKPLFQVLANDKDIGDNGKIQYSI--KGGRGKGKFKIHPTTGMVYSQRGFEAG 228

Query: 120 EQYSITVQATDTG--GKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           ++Y + ++A D+G   +S QT V V V  VP  +   PVF+ N   V V+E   +   VA
Sbjct: 229 QEYEMMIRAADSGEPQRSHQTRVSVQVVEVPKESENPPVFKTNNQTVEVTESDEVGFLVA 288

Query: 176 TI 177
            +
Sbjct: 289 LV 290



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+     K+      +++   +      L + ++D+NDNAP+  M       P  ++ 
Sbjct: 1988 LDRE--TQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDNAPKFTMQTYSATLPEDVEV 2045

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATDND+G+N +I Y    + +   H F I   SG++ T GK +  E   
Sbjct: 2046 GTL---VTKVHATDNDIGINRKIRYEF--IDSADGH-FLIAADSGIV-TLGKPLDRETKA 2098

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G     ++  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 2099 MYNVTIQAVDQGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLA 2158

Query: 180  SRLASG 185
            +   +G
Sbjct: 2159 TSKDTG 2164



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++++ + DND  +N ++
Sbjct: 1177 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISVSEAAPFGTSVLRVSSRDNDTDINQQV 1233

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             Y+I + +      F IDP  GVI     L     E +  TV A D G  S  +   V V
Sbjct: 1234 RYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHETHESHHFTVIAIDRGVPSLSSTAHVWV 1293

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 1294 TVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 1330



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
            R +  + ATD D G    + Y+I   S+     F I+ ++G I T  KL   EQ  Y I 
Sbjct: 1423 RLVTSVIATDEDFGEYGTVIYTI--ASDLMKEIFDINRQTGEIVTRKKLNREEQKLYEIP 1480

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            V ATD GG+S   IV V  V   N  SPVF    Y  ++    + N+
Sbjct: 1481 VMATDGGGRSGFVIVRVK-VGDENDNSPVFLLREYKASIHGNLTTNT 1526



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 10/158 (6%)

Query: 27  EKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
           + QGT A    + + + ++D ND+AP   +   IQ +  E       +V++ A D D G 
Sbjct: 446 KDQGTPAKRNYARVIITVHDHNDHAPEF-ISEIIQGKVYETSPIGAAVVQVYAIDRDRGD 504

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIV 140
           NA+ITYSI    N G + F IDP  GVI    +  L    +Y + V+ATD G  +    V
Sbjct: 505 NAKITYSITS-GNVG-NMFAIDPDLGVIRVARELDLSVSSEYILLVKATDHGSPALSNTV 562

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V V V   +   P F Q      + E   + + V  +
Sbjct: 563 PVHVMVTMADNAPPRFIQKELSAEIYENQQLGTYVKHV 600



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        +I  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 1912 VTVQILDVNDNPPYCLRYRYREILSEGSHPGTYVLTVLATDYDDEPNAKLRFYLTGDNND 1971

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               KF +D  +GV++T G+L    Q  YS+T    D    S +   ++ + V   N  +P
Sbjct: 1972 ---KFSLDKETGVLKTVGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDNAP 2028

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F   TY   + E   + + V  +
Sbjct: 2029 KFTMQTYSATLPEDVEVGTLVTKV 2052



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 7/152 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDND 79
            V+A        +    +++ + D ND+AP+     P  I   E   +   I+KI A D D
Sbjct: 1688 VLAETDSSPPLTALAEISLQVLDENDHAPKFES-NPYGISLAENIEEGTSILKIIAHDED 1746

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N E+ YS         + F +D  +G I T   L   +Q  Y   V ATD G     
Sbjct: 1747 LGSNGEVRYSFGSDIGELANVFTVDTYTGWISTLVLLDKEKQPEYKFQVVATDNGNPKHF 1806

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                V V +   N   P F  + Y+  V+E A
Sbjct: 1807 ARTSVHVKLKDYNDNPPAFVDDRYEAAVNEDA 1838



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L     +QY +TV+ATD+  G  ++ 
Sbjct: 1125 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 1182

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +V + V+   N   P F Q++Y+++VSE A   ++V  ++
Sbjct: 1183 LVSILVL-DVNDCPPEFTQDSYNISVSEAAPFGTSVLRVS 1221



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 16/160 (10%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDND 79
            Q+  +EK   A    V + V + DINDN P    +P   + + +A++   I K+ A D D
Sbjct: 967  QMPGKEKPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVDAQKGDVITKVHAVDMD 1023

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQT 138
             G N E+ Y +          F++  ++G I     L     +Y +T+ A D GG +  +
Sbjct: 1024 SGDNGEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITPCS 1079

Query: 139  I---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            I   V V V+   +   PVF +  Y  +V E   I+S ++
Sbjct: 1080 IEVPVNVKVI---DRSMPVFDKQFYTDSVLESIEIHSPLS 1116



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 24/174 (13%)

Query: 18  KFRFQV----IAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGE 65
           KF F V    + + K  +  +  V + V   D+ND  P+          ++P  +  A  
Sbjct: 753 KFTFHVKVSDLGKPKLSSETTAKVMIVVT--DVNDCPPKFLENDYNATVLLPTYKNVA-- 808

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               ++++ A D D      + Y I  +     H F IDP++GVI         + Y + 
Sbjct: 809 ----VIQVRAVDPDSSEGVPLRYDI--IDGNKAHTFDIDPQTGVITIYNPERMKKSYLLR 862

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           V+ +D  GK S       +V        +FQ++ Y+  + E ++  +TVA + V
Sbjct: 863 VRVSD--GKYSNVCQVNVMVENSENSGLMFQKDVYEGTIPENSTRITTVAVVNV 914



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F ++P +G+I    +L   +   Y++TV AT+     +   V V V+   N  +P F Q 
Sbjct: 621 FFMNPSTGIIVIKNELDYEKTKFYNLTVAATNMASAKAHCNVIVHVL-DRNDNAPRFLQA 679

Query: 159 TYDVNVSEGASINSTVAT 176
           TY+  +SEGASI S V T
Sbjct: 680 TYNGEISEGASIGSLVLT 697



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
           ++V K  LD +     KF    +A     +A +   ++ V++ D NDNAPR L      +
Sbjct: 629 IIVIKNELDYEKT---KFYNLTVAATNMASAKA-HCNVIVHVLDRNDNAPRFLQATYNGE 684

Query: 61  IQAGEARRQIVK--------IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           I  G +   +V         I+A D D  +NA + Y I  V +     F ID  +G I T
Sbjct: 685 ISEGASIGSLVLTNSSTPLVIKAEDADSELNALLNYDI--VEDLPRKYFHIDSSTGAIRT 742

Query: 113 TGKLIAGE--QYSITVQATDTGGK--SSQTIVEVS-VVPGPNTRSPVFQQNTYDVNV 164
              L      +++  V+ +D G    SS+T  +V  VV   N   P F +N Y+  V
Sbjct: 743 VMVLDHESIPKFTFHVKVSDLGKPKLSSETTAKVMIVVTDVNDCPPKFLENDYNATV 799


>gi|402894933|ref|XP_003910594.1| PREDICTED: protocadherin Fat 3 [Papio anubis]
          Length = 4573

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2536 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2593

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2594 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2653

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2654 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2712

Query: 176  TITV 179
            T+ +
Sbjct: 2713 TLRI 2716



 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 3001 VSVSDVNDNSPVCEQVAYTALLPEDIASNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 3058

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3059 -EFFLDPESGELKTLA-LLDRERVPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3115

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3116 SSDHYNACVYENTATKALLTRV 3137



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1501 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1558

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1559 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1616

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1617 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1675

Query: 176  TIT 178
             I+
Sbjct: 1676 LIS 1678



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2057 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2111

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2112 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2170

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2171 DKPFYTASVNEDIRMNTPILSI 2192



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +   A  Q++ + AT  D+G N
Sbjct: 3197 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSAGTQVLAVFATSKDIGTN 3252

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3253 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3310

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3311 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3344



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 15/165 (9%)

Query: 24   IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDN 78
            + RE+Q   A   + + V + D NDN P+ P     QI+  E  R+     I +  A D 
Sbjct: 1212 LDREQQ---AEHFLEVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDR 1267

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GK 134
            D G NAEI+YSI   ++ G  KF IDP++G++ +  +  AG    +T++A D G      
Sbjct: 1268 DEGPNAEISYSIVDGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSS 1325

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +++  +E    P P+     F +  Y+  V E   +   V  ++V
Sbjct: 1326 TARLHIEWIKKPPPSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1370



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1822 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1878

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1879 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1935

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1936 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 1988



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1436 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1492

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1493 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1552

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1553 PLYEASVFESAALGSAVLQVT 1573



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2763 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2814

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2815 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2874

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2875 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2931



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K++  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1686 IYEVKDGDINGIFTINPYSGVI-TTRKVLDYERTSSYQLIIQATNMAGMASNATVNIQIV 1744

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1745 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1780



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 20/168 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDISVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ              ++  +EV V V   N   P F +  Y + + E
Sbjct: 1215 EQ-------------QAEHFLEVVVQVLDENDNKPQFPEKVYQIKLPE 1249



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2249 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2308

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2309 HIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHI- 2366

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2367 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2403



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKTQVTISIEDANDHTPEFQQPLYDANVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVTNKEGDLKTQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD NV+E   + ++V T++ S    G
Sbjct: 476 LYDANVNESVPVGTSVLTVSASDKDKG 502



 Score = 42.4 bits (98), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2357 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2416

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2417 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2472

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 2473 ANLYSPAFSQSTYVAEVRENAAAGTKV 2499



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3083 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 3142

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3143 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3201

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3202 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSAGTQVLAV 3242



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2495 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2551

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2552 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2593


>gi|148886692|ref|NP_001008781.2| protocadherin Fat 3 precursor [Homo sapiens]
          Length = 4557

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N  I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGYIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3075 -EFFLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NMFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTQKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFVINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++ D+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETMGSYWLTV 1118

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
             ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENVAAGTKV 2515



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|432090713|gb|ELK24052.1| Protocadherin Fat 3 [Myotis davidii]
          Length = 3377

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1385 VITTERLDRE--NPLEGDISIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1442

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1443 RADVGRGHLVTQVQAVDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGSFNQL 1502

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 1503 RNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 1561

Query: 176  TITV 179
            T+ +
Sbjct: 1562 TLRI 1565



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 1850 VTVSDVNDNSPVCDQVSYTALFPEDIPSNKIILKVSAQDADIGSNGDIRYSLY---GSGH 1906

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            ++F +DP SG ++T+  L       Y +  +ATD GG+  Q+ + + ++   N   PVF 
Sbjct: 1907 NEFFLDPESGQLKTSSPLDRERVPAYKLIARATDGGGRFCQSDIHL-ILEDVNDNPPVFS 1965

Query: 157  QNTYDVNVSE 166
               Y   V E
Sbjct: 1966 SAHYHACVYE 1975



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 2046 GRALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLTVFATSKDIGTN 2101

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KFRI+PR+G I  +  L     +++ + V+A D G  +   +  
Sbjct: 2102 AEITYLIRSGNEQG--KFRINPRTGGILVSEVLDYELCKKFYLVVEAKDGGTPALSAVAT 2159

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 2160 VNINLTDVNDNPPTFSQDVYSAVISEDALVGDSV 2193



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)

Query: 41  VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           VN+ D ND++P    P+      ++      ++++ A D D G NAE+ Y+I    NTG 
Sbjct: 387 VNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG- 444

Query: 99  HKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV 154
           + F+I+P  G+I  + +  +    Q+ ++V+ TD G    S+  IV +SV    N+  P 
Sbjct: 445 NTFKIEPVLGIITVSKEPDMTTMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PK 503

Query: 155 FQQNTYDVNVSEGASINSTVATIT 178
           F    Y   V+E   I ++V  I+
Sbjct: 504 FAHKDYQAEVNENVDIGTSVILIS 527



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
            +++IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 1932 YKLIARATDGGGRFCQSDIHLILEDVNDNPPVFSSAHYHACVYENTANKALLTRVQAVDP 1991

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   +++    F ID  SG+I     L   +Q  Y+I+VQATD   G++
Sbjct: 1992 DVGINRKVVYSL---ADSAGGFFSIDESSGIIILEQPLDREQQPSYNISVQATDQSPGRA 2048

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S  + V T+
Sbjct: 2049 LSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLTV 2091



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 21  IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 79

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
             ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 80  DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 137

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F +  Y+  V E   +   V  ++V
Sbjct: 138 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 169



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            ++ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 906  SIEDINDNSPVFVGLPYYAAVQVDA-EPGTPIYRVTAIDKDKGANGEVTY----VLQDDY 960

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P  G +   E     ++  +Y +TV A D G  S  T+VE+ +    N   PVF
Sbjct: 961  GHFEINPNLGNVILKEAFNSDLSNIEYGVTVLAKDGGNPSLSTLVELPITI-VNKAMPVF 1019

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++ + +I
Sbjct: 1020 DKPFYTASINEDIGMDTPILSI 1041



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 11/154 (7%)

Query: 18  KFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVK 72
           +F F V  R+    Q TA S PV +++ + D+NDN P     +   + +       +++K
Sbjct: 679 RFHFHVHVRDSGSPQLTAES-PVEVSIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEVLK 737

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
           + ATD D  V  E+TYS+   S   +  F +D  +G++      ++ + Y++ V+ +D  
Sbjct: 738 VSATDPDSEVPPELTYSLLEGS---VDYFLMDSNTGMLSIKNNNLSKDHYALIVKVSD-- 792

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           GK   T +   +V         F Q+ Y  ++SE
Sbjct: 793 GKFYSTSMVTILVKEAMDSGLHFTQSFYSTSISE 826



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 10/140 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++Y+++  +    + K
Sbjct: 235 DNNDNGPEFSQ-PSYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDAASMRK 291

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FR+DP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 292 FRMDPSTGVLYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 351

Query: 158 NTYDVNVSEGASINSTVATI 177
             Y+ +V E A++ S V  +
Sbjct: 352 PLYEASVFESAALGSAVLQV 371



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 11/158 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            G  A V V L VN  D+NDN P    P       +A      ++++ +TD D   N  + 
Sbjct: 1099 GARAEVAVDLLVN--DVNDNPPVFDQPTYNTTLTEASLIGTPVLQVVSTDVDSENNKMVH 1156

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEV 142
            Y I   +      F ID  SG+I  T +++  E     ++ V+ATD+G    SS+ +V +
Sbjct: 1157 YQIVQDTYNSTDYFHIDSASGLI-LTARMLDHESVQHCTLKVRATDSGFPSLSSEVLVHI 1215

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1216 -YISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1252



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 5/85 (5%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
           F I+P SGVI TT K +  E+   Y +TVQAT+  G +S   V + +V   N  +P+F  
Sbjct: 547 FTINPYSGVI-TTRKALDYERTSSYLLTVQATNMAGMASNVSVNIQIV-DENDNAPIFLF 604

Query: 158 NTYDVNVSEGASINSTVATITVSRL 182
           + Y  ++SE A +NS V ++  S L
Sbjct: 605 SQYSGSLSEAAPVNSIVRSLDNSPL 629



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS---------LTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+          + + + D+NDN P         + ++     
Sbjct: 1612 FHFKV--------AATIPLDKVDIVFTADVDIKVLDLNDNRPVFETASYETMVMEGMPIG 1663

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 1664 TKLTQVRAIDMDWGANGQVTYSLHADSQPEKVMEAFNIDSNTGWISTLKDLDHETDPSFT 1723

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     S+  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 1724 FSVVASDLGEAFSLSAMALVSVRVT-DINDNAPVFAHEVYQGNVKESDPPGEVVAVLS 1780



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 1195 LKVRATDSGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 1254

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + Y+I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 1255 DSSDFDRLEYNI--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 1311

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 1312 TAQVHIRVL-GANLYSPTFSQSTYVAEVRENAAAGTKV 1348



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 1344 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 1400

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1401 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1442


>gi|308490500|ref|XP_003107442.1| CRE-HMR-1 protein [Caenorhabditis remanei]
 gi|308251810|gb|EFO95762.1| CRE-HMR-1 protein [Caenorhabditis remanei]
          Length = 3066

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 12/152 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQ---IVKIEATDNDLGVNAEITYSI 90
            +L + + D+N+N P  P         +IQ G  +     IVK+EATD+D   N +I YS+
Sbjct: 865  TLLIGIEDVNNNKPEFPDCARYSEIAKIQEGTYKSDPPTIVKVEATDDDSSANGDIVYSL 924

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-V 145
            Y+  +     F ID  +G++  +  ++   +      +TV+ATD G +      + SV V
Sbjct: 925  YYTQSESRKAFVIDRHTGILTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV 984

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N  SP F++ +Y+ +VS   SI ++V T+
Sbjct: 985  VDVNDNSPQFERPSYETSVSRFESIGTSVITV 1016



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 84/204 (41%), Gaps = 38/204 (18%)

Query: 9    LDRDPPN---PGKFRFQVIAREKQGTAASVPV--------------SLTVNLNDINDNAP 51
            LDRDPP       F  Q I  +  G      V                 VN+ DINDN+P
Sbjct: 1519 LDRDPPTGVPSWNFVVQAIDDDGNGLVGYADVQVRVTVVNDDTVVFEFQVNVRDINDNSP 1578

Query: 52   RLPMIPPIQIQAGEARRQI-------VKIEATDND--LGVNAEITYSIYHVSN---TGLH 99
              P      I+  E R  I       + ++A D D     NA I Y I  V N    G  
Sbjct: 1579 IFPERLYGFIE--ENREPIHSEGVYFMDVQARDFDDPTTENANIEYGI--VRNKLINGEP 1634

Query: 100  KFRIDPRSGVIETTGKL---IAGE-QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
             FRID  +G I     L   I+ E ++ I V+A D G  S +    V++ V   N  +P 
Sbjct: 1635 VFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPF 1694

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F++  Y+ +V E A I + V + +
Sbjct: 1695 FEKTRYEGSVDETAPIGAAVMSFS 1718



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 19/167 (11%)

Query: 30  GTAASVPVSLTVNLNDIND-----NAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGV 82
           G  +S   ++ +++ D+++     N+P LPM+   P+    G    Q V   A D +   
Sbjct: 416 GLQSSRTQTIRIHVEDVDEPPSFVNSP-LPMLAVVPLNPTIGRIVYQFV---ARDENGDG 471

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYSITVQATD---TGGKSSQT 138
           ++ + Y    V   G   F +D +SGV+ T   K   GE Y I+VQA D   T   +SQ 
Sbjct: 472 DSNVLYKEIDVIPAG--SFSVDSKSGVVRTGWSKYERGETYRISVQAIDMTLTDNSTSQ- 528

Query: 139 IVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           + EV+++    + R P F +  Y+V VSE   ++ +V  +      S
Sbjct: 529 LSEVAILEILADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRS 575



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 9   LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
           LD D  + P + + +V ARE    +    V+LT+ ++D+NDN+P     P    Q  E  
Sbjct: 615 LDYDDQSLPKQHQLKVTAREDNRESH---VALTIRIDDVNDNSPMFTR-PLYTAQVREDI 670

Query: 66  -ARRQIVKIEATDNDLGVNAEITYSI 90
              + I+K+ A D D G N+ ITYS+
Sbjct: 671 PLNQTILKVTAIDKDSGDNSRITYSL 696


>gi|149017275|gb|EDL76326.1| rCG49535 [Rattus norvegicus]
          Length = 649

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 13/193 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----I 56
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P     +
Sbjct: 59  FLVLGK-SLDRE--ENAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 115

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
           P ++  A      ++K+ A+D D G N+EI YS+   VS+T   KF+ID  SG I TTG+
Sbjct: 116 PLLENTANGTL--VIKLNASDADEGANSEIVYSLSSDVSSTTRTKFQIDANSGEIRTTGE 173

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
           L   E+  Y I + A+D G  S     ++SV +   N  +P     +  + V E A + +
Sbjct: 174 LDYEEKTSYEIQIIASDKGTPSMSGHCKISVKLMDINDNTPEVSITSLSLPVQENAPLGA 233

Query: 173 TVATITVSRLASG 185
            +A I+VS   SG
Sbjct: 234 VIALISVSDRDSG 246



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  Q+IA +K   + S    ++V L DINDN P + +     P+Q  A      I  I  
Sbjct: 182 YEIQIIASDKGTPSMSGHCKISVKLMDINDNTPEVSITSLSLPVQENA-PLGAVIALISV 240

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D G+N ++T S+  H+    +  F+ +  S V+++        +Y + V A D G  
Sbjct: 241 SDRDSGINGQVTCSLSPHLPFKLVSTFK-NYYSLVLDSALDRETTAEYKVMVTARDGGSP 299

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S Q    +SV V   N  +P+F Q  Y V V E
Sbjct: 300 SLQATATISVEVADVNDNAPLFAQPEYTVFVKE 332



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   +  G +  ++V       
Sbjct: 397 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPML--LPHGAVGVGGSVSELVPRSVGSG 454

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +     T +  FR+   +G I TT  L
Sbjct: 455 HVVTKVHAVDADSGYNAWLSYELQPTVGTRI-PFRVGLYTGEISTTRAL 502


>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
            partial [Bombus impatiens]
          Length = 4739

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT   + V SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 3251 QGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTE----VARVLATSKDTG 3306

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            VNA++ YSI  V      KF+ID RSGVI    +L       Y +T+QA D G    S+ 
Sbjct: 3307 VNADVYYSI--VGGNEHKKFQIDARSGVITIAEQLDFERARDYFLTIQAIDGGIPPLSNH 3364

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V+   N  +P+F + +Y  ++ E A I   V  +  + L S
Sbjct: 3365 ATVNITVIDS-NDNAPIFSEVSYRASIREDAKIGEKVTQVFANDLDS 3410



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L V + D+NDNAP+    +   +I +       + +  ATD DLG NA +TYS+   +N 
Sbjct: 864  LPVTILDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADLGENARVTYSLVTETN- 922

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
                FR+DP +GV+   G+L    Q  Y + ++A D GGK        S  +V V+ V  
Sbjct: 923  ---DFRVDPVTGVLTVFGRLDRERQEIYELRIRAQDNGGKGTDSPPLYSDALVRVT-VDD 978

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVA 175
             N  +P F  +TY V + E   I + VA
Sbjct: 979  VNDNAPSFALSTYTVKIREDVPIWTVVA 1006



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 10/182 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            +  S   LDR+  N  +   +V  R+    + S    + + + DIND+ P        +Q
Sbjct: 1255 ITTSGRKLDRE--NQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQ 1312

Query: 61   IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I A     + + ++ A D D+G N +I YSI      G  KF+I P +G++ +     AG
Sbjct: 1313 IPASPSTDKPLFQVLANDKDIGDNGKIQYSI--KGGRGKGKFKIHPTTGMVYSQRGFEAG 1370

Query: 120  EQYSITVQATDTG--GKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            ++Y + ++A D+G   +S QT V V V  VP  +   PVF+ N   V V+E   +   VA
Sbjct: 1371 QEYEMMIRAADSGEPQRSHQTRVSVQVVEVPKESENPPVFKTNNQTVEVTESDEVGFLVA 1430

Query: 176  TI 177
             +
Sbjct: 1431 LV 1432



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+     K+      +++   +      L + ++D+NDNAP+  M       P  ++ 
Sbjct: 3130 LDRE--TQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDNAPKFTMQTYSATLPEDVEV 3187

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATDND+G+N +I Y    + +   H F +   SG++ T GK +  E   
Sbjct: 3188 GTL---VTKVHATDNDIGINRKIRYEF--IDSADGH-FLVAADSGIV-TLGKPLDRETKA 3240

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G     ++  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 3241 MYNVTIQAVDQGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLA 3300

Query: 180  SRLASG 185
            +   +G
Sbjct: 3301 TSKDTG 3306



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++++ + DND  +N ++
Sbjct: 2319 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISVSEAAPFGTSVLRVSSRDNDTDINQQV 2375

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             Y+I + +      F IDP  GVI     L     E +  TV A D G  S  +   V V
Sbjct: 2376 RYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHETHESHHFTVIAIDRGVPSLSSTAHVWV 2435

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 2436 TVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 2472



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
            R +  + ATD D G    + Y+I   S+     F I+ ++G I T  KL   EQ  Y I 
Sbjct: 2565 RLVTSVIATDEDFGEYGTVIYTI--ASDLMKEIFDINRQTGEIVTRKKLNREEQKLYEIP 2622

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            V ATD GG+S   IV V  V   N  SPVF    Y  ++    + N+
Sbjct: 2623 VMATDGGGRSGFVIVRVK-VGDENDNSPVFLLREYKASIHGNLTTNT 2668



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 17/169 (10%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           GT  +    +T+ +  +N ++P + +  +P I  Q+      IV++   DND G++ +I 
Sbjct: 268 GTRRASTAKVTIRVRQVNLHSPEIYVHHLPDIVEQSNADIYAIVRV--VDNDEGIHGQIA 325

Query: 88  YSIYHVSNTGLHKFRIDPRSG---------VIETTGKLIAGEQYSITVQATDTG--GKSS 136
            S+  V       FR+ P  G         V+    +  A + Y++T++ATD G   + S
Sbjct: 326 -SLDIVGGDPAGHFRVRPAGGPHSGEYNIEVLHLLDRETAVQGYNLTLRATDRGVPQRYS 384

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V V +    N  +PVF +  Y+V V E A IN+ V  + V+    G
Sbjct: 385 YKFVPVHLA-DLNDNAPVFSREIYEVKVPETAPINTPVIRLKVTDADEG 432



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 10/158 (6%)

Query: 27   EKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
            + QGT A    + + + ++D ND+AP   +   IQ +  E       +V++ A D D G 
Sbjct: 1588 KDQGTPAKRNYARVIITVHDHNDHAPEF-ISEIIQGKVYETSPIGAAVVQVYAIDRDRGD 1646

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIV 140
            NA+ITYSI    N G + F IDP  GVI    +  L    +Y + V+ATD G  +    V
Sbjct: 1647 NAKITYSITS-GNVG-NMFAIDPDLGVIRVARELDLSVSSEYILLVKATDHGSPALSNTV 1704

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V V V   +   P F Q      + E   + + V  +
Sbjct: 1705 PVHVMVTMADNAPPRFIQKELSAEIYENQQLGTYVKHV 1742



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        +I  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 3054 VTVQILDVNDNPPYCLRYRYREILSEGSHPGTYVLTVLATDYDDEPNAKLRFYLTGDNND 3113

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               KF +D  +GV++T G+L    Q  YS+T    D    S +   ++ + V   N  +P
Sbjct: 3114 ---KFSLDKETGVLKTVGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDNAP 3170

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F   TY   + E   + + V  +
Sbjct: 3171 KFTMQTYSATLPEDVEVGTLVTKV 3194



 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 7/152 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDND 79
            V+A        +    +++ + D ND+AP+     P  I   E   +   I+KI A D D
Sbjct: 2830 VLAETDSSPPLTALAEISLQVLDENDHAPKFES-NPYGISLAENIEEGTSILKIIAHDED 2888

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N E+ YS         + F +D  +G I T   L   +Q  Y   V ATD G     
Sbjct: 2889 LGSNGEVRYSFGSDIGELANVFTVDTYTGWISTLVLLDKEKQPEYKFQVVATDNGNPKHF 2948

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                V V +   N   P F  + Y+  V+E A
Sbjct: 2949 ARTSVHVKLKDYNDNPPAFVDDRYEAAVNEDA 2980



 Score = 42.4 bits (98), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L   +  QY +TV+ATD+  G  ++ 
Sbjct: 2267 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 2324

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +V + V+   N   P F Q++Y+++VSE A   ++V  ++
Sbjct: 2325 LVSILVL-DVNDCPPEFTQDSYNISVSEAAPFGTSVLRVS 2363



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEATDNDLGVNAEIT 87
           GT       + +N+ D NDN P        + I   E A   +VKI A D D G NA I+
Sbjct: 486 GTRKQSSAKVKINVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKITAKDRDSGENAYIS 545

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           YSI ++       F ID  SG+++T   L       +Y + V+ +D G
Sbjct: 546 YSIDNIQKV---PFEIDHFSGIVKTKQVLDYETMKREYLLHVRVSDWG 590



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 16/160 (10%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDND 79
            Q+  +EK   A    V + + + DINDN P    +P   + + +A++   I K+ A D D
Sbjct: 2109 QMPGKEKPRVAH---VIVNITILDINDNCPMFVNLPYYAVVSVDAQKGDVITKVHAVDMD 2165

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQT 138
             G N E+ Y +          F++  ++G I     L     +Y +T+ A D GG +  +
Sbjct: 2166 SGDNGEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITPCS 2221

Query: 139  I---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            I   V V V+   +   PVF +  Y  +V E   I+S ++
Sbjct: 2222 IEVPVNVKVI---DRSMPVFDKQFYTDSVLESIEIHSPLS 2258



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 24/174 (13%)

Query: 18   KFRFQV----IAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGE 65
            KF F V    + + K  +  +  V + V   D+ND  P+          ++P  +  A  
Sbjct: 1895 KFTFHVKVSDLGKPKLSSETTAKVMIVVT--DVNDCPPKFLENDYNTTVLLPTYKNVA-- 1950

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
                ++++ A D D      + Y I  +     H F IDP++GVI         + Y + 
Sbjct: 1951 ----VIQVRAVDPDSSEGVPLRYDI--IDGNKAHTFDIDPQTGVITIYNPERMKKSYLLR 2004

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            V+ +D  GK S       +V        +FQ++ Y+  + E ++  +TVA + V
Sbjct: 2005 VRVSD--GKYSNVCQVNVMVENSENSGLMFQKDVYEGTIPENSTRITTVAVVNV 2056



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F ++P +G+I    +L   +   Y++TV AT+     +   V V V+   N  +P F Q 
Sbjct: 1763 FFMNPSTGIIVIKNELDYEKTKFYNLTVAATNMASAEAHCNVIVHVL-DRNDNAPRFLQA 1821

Query: 159  TYDVNVSEGASINSTVAT 176
            TY+  +SEGASI S V T
Sbjct: 1822 TYNGEISEGASIGSLVLT 1839



 Score = 38.5 bits (88), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ ND+N      P+  P + +A         R I+++ A D DLG N EI YS    ++
Sbjct: 173 LDTNDLN------PLFYPTEYEATITEDTPLHRSILRVIAEDADLGRNGEIYYSFAEETD 226

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
               +F + P SGVI  T  L   E+  + + V A D G 
Sbjct: 227 ----QFAVHPVSGVITLTRPLRYSERALHELVVLAKDRGA 262



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 47  NDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           N +AP     P  +I+A E+ +    +VKI A D DL  N ++ + I       +  F I
Sbjct: 767 NIHAPEFVDFPS-EIKANESVKIGTTLVKIRARDRDLDYNGKLVFCISSGDRDSV--FGI 823

Query: 104 DPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP +G +   G L      +Y + +   D G   KS+  ++ V+++   N  +P F+++ 
Sbjct: 824 DPDTGDLNVIGYLDRERESEYFLNISVYDLGKPQKSASKMLPVTIL-DVNDNAPKFEKSL 882

Query: 160 YDVNVSEGA 168
               +SE A
Sbjct: 883 ASFRISETA 891



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 13/165 (7%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
             F VIA ++   + S    + V + D+NDN P+   P       +  E  + +  + A+D
Sbjct: 2414 HFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASD 2473

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY--SITVQATDTGGKS 135
             D  V+ ++TY+I  V       + ID  +G+I        GE+    + V  TD    +
Sbjct: 2474 PDY-VDDKLTYTI--VGGNEQQTYNIDQSTGIISLINMQNFGEKKLSMLNVSVTDN-VYT 2529

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
            S   V++ ++P  N  +P FQ    +V V E    G  + S +AT
Sbjct: 2530 SFARVKIEILPA-NRHNPTFQNPIVEVTVFENQLPGRLVTSVIAT 2573


>gi|348503283|ref|XP_003439194.1| PREDICTED: cadherin-18-like [Oreochromis niloticus]
          Length = 768

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 17/151 (11%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDN P+    P     P     G    Q+   +A D   G NA++ YSI   
Sbjct: 115 FIITVQDINDNVPQFQNEPYVSSIPEMCPIGTTVAQVTATDADDPMFGNNAKLIYSILQ- 173

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F ++P++G+I T+ + +   A EQY + VQ  D    +GG SS T V VS+  
Sbjct: 174 ---GEPYFSVEPKTGIIVTSWQNMDREAREQYQVVVQVKDMLGLSGGYSSSTTVTVSLT- 229

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P FQQ+ Y   V E A+I +T+  I
Sbjct: 230 DVNDNGPTFQQHLYTFAVPENAAIGTTIGRI 260



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 27/197 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQ----GTAASVPVSLTVNLNDINDNAPRLP--- 54
           +V S +N+DR+     + ++QV+ + K         S   ++TV+L D+NDN P      
Sbjct: 187 IVTSWQNMDRE----AREQYQVVVQVKDMLGLSGGYSSSTTVTVSLTDVNDNGPTFQQHL 242

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVI 110
                P     G     I +I A D D G+NA++TYS+           + DP  + GVI
Sbjct: 243 YTFAVPENAAIGTT---IGRIMAEDGDTGINAKMTYSLEGELEESTFTIKTDPVTQEGVI 299

Query: 111 ETTGKLI--AGEQYSITVQA----TDTGGKSSQTIVE---VSVVPGPNTRSPVFQQNTYD 161
                L      ++ +T +A     DT   S     +   V V+       PVF    Y+
Sbjct: 300 LLAKPLDFEVKRRFDMTAEAVNDHVDTRFLSLDEFTDKTTVKVIVRDEDEPPVFLSPVYE 359

Query: 162 VNVSEGASINSTVATIT 178
             + E A++ + V +++
Sbjct: 360 WKLPENAAVGTVVGSVS 376


>gi|172045818|sp|Q8TDW7.2|FAT3_HUMAN RecName: Full=Protocadherin Fat 3; Short=hFat3; AltName:
            Full=Cadherin family member 15; AltName: Full=FAT tumor
            suppressor homolog 3; Flags: Precursor
          Length = 4589

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N  I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGYIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3075 -EFFLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NMFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTQKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFVINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++ D+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETMGSYWLTV 1118

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
             ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E     Y+     +  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGE----FYYYFKNKVDLFS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENVAAGTKV 2515



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|427795051|gb|JAA62977.1| Putative cadherin egf lag seven-pass g-type receptor, partial
           [Rhipicephalus pulchellus]
          Length = 2741

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 22/187 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAPR  + P  Q   
Sbjct: 315 LAKELDYEDLRQPKSYSLIVTATEDSG-GFSTSVELTIKVTDVNDNAPRFEL-PDYQAHN 372

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+++ ATD D G NAE+TYS+          F ID R GV+ +  +L
Sbjct: 373 VDEDIAVGTS---ILQVSATDMDTGRNAELTYSL------DKEDFTIDSR-GVVYSNRRL 422

Query: 117 IA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            A     Y +TV+ATD G         + +     N  +P F Q+ Y  NV E A  ++ 
Sbjct: 423 DADVNNTYVLTVRATDRGEPPLTGTATIRIYTENKNDEAPKFSQDVYTPNVDENAGPSTL 482

Query: 174 VATITVS 180
           V T+  S
Sbjct: 483 VTTVVAS 489



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 12/174 (6%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            LDRD P+   ++RF V A ++ G        + VNL D+NDNAP  P  +      + G 
Sbjct: 1190 LDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIYTGNVTENGT 1249

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A   ++ + ATD D    G NA + YSI    V+  G   F ID  +GVI T    +  E
Sbjct: 1250 AGMTVMTMTATDYDDPNEGNNARLAYSIEQNQVNENGELIFTIDEETGVISTAVCCLDRE 1309

Query: 121  ---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
               +Y+I V A D GG        +  +   N   P F +  + V+V E  + N
Sbjct: 1310 TNPEYTIKVVAVDGGGLKGTGTATIK-IKDINDMPPEFTKKDWFVDVEETEADN 1362



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 20/188 (10%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLT----VNLNDINDNAP---RLPMIP 57
           +LD+D     K+   V AR+        A  P + T    V + D+NDN P         
Sbjct: 527 HLDKD-----KYELNVTARDDGACCRNGALTPHTSTALVVVFITDVNDNKPVFEECQTYT 581

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P   +  ++   ++K++A D D G N ++ YSI    N    KF +D  +G I T     
Sbjct: 582 PKVEEGAQSGTSVIKVKARDLDKGHNGQVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFD 641

Query: 118 A----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +   +  
Sbjct: 642 REGDDGRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEYRENVKQDTQVGI 701

Query: 173 TVATITVS 180
            +  ++ S
Sbjct: 702 HILRVSAS 709


>gi|50510647|dbj|BAD32309.1| mKIAA0811 protein [Mus musculus]
          Length = 1654

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           + + S++ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 269 WRITSRKTLDRE--HIAKYLLRITASDGK-FQASVPVEVFVL--DINDNSPQCSQL---- 319

Query: 61  IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           +  G+ R        I+K+ A D D+  NA+ITYS++     G  +F++DP +G + T  
Sbjct: 320 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLH---GPGAQEFKLDPHTGELTTLS 376

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L    +  Y++  +ATD GG+S Q  V +  +   N  +P F  +   V V +  ++ +
Sbjct: 377 VLDRERKDVYNLVAKATDGGGQSCQAEVTLH-IEDVNDNAPRFFPSHCAVAVFDNTTVKT 435

Query: 173 TVATI 177
            VA +
Sbjct: 436 PVAVV 440



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 12/172 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
           + ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 386 YNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 445

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGGK-- 134
           D GVNA++ YS+   +++   +F ID  SGVI  E   ++ +     +TV+A+D G    
Sbjct: 446 DQGVNAQVVYSL---TDSADGQFSIDATSGVIRLEKPLQVRSSSAVELTVRASDLGTPIP 502

Query: 135 -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI-TVSRLAS 184
            S+   V VS+V G     P+F  + +   V E A I+  V  + T++R  S
Sbjct: 503 LSTLGTVTVSIV-GLEDYLPIFLNSEHSTQVPEDALIDMEVLYLATLTRPGS 553



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 38  SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ +N+ D+N++ PR    +     ++       I+ + A+D+D  VN+ ITYS+  V  
Sbjct: 611 TIVINVTDVNEHHPRFTHDLYTVRVLENAIVGDVILTVSASDDDGPVNSVITYSL--VGG 668

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
             L  F IDP+ G ++   K +  EQ   YS+ ++ATD+G        EV+V V   N  
Sbjct: 669 NQLGHFTIDPKKGKLQ-VAKALDWEQTPSYSLRIRATDSGQPPLHEDTEVAVEVVDVNDN 727

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITV 179
            P F Q  Y   V E + I   V  + +
Sbjct: 728 PPRFFQLNYSTAVQENSPIGIKVLQLIL 755



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 37  VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 86  VSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 145

Query: 95  NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
            + +H+ F +D  SG I T  +L    Q  Y   V A D G     SSQ +VEVS+    
Sbjct: 146 GSNIHQLFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSIT-DE 204

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATI 177
           N   P F    Y  +V E       VAT+
Sbjct: 205 NDNPPRFASEDYRGSVVENNEPGELVATL 233


>gi|332207901|ref|XP_003253033.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Nomascus
            leucogenys]
          Length = 4557

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 16/145 (11%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V+++D+NDN+P    +      P  I + E    I+K+ A D D+G N +I YS+Y   N
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNEI---ILKVSAKDADIGSNGDIRYSLYGSGN 3073

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            +   +F +D  SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   
Sbjct: 3074 S---EFFLDSESGELKTLA-LLDRERIPMYSLMAKATDGGGRFCQSNIHL-ILEDVNDNP 3128

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF  + Y+  V E  +  + +  +
Sbjct: 3129 PVFSSDHYNACVHENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYATVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V++ D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVHVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQI 61
            LDR+      +   V A ++  G + S   ++T+ + DINDN P       L  +P    
Sbjct: 3193 LDRE--QQSSYNISVWATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP---- 3246

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AG 119
            +      Q++ + AT  D+G NAEITY I   +  G  KF+I+P++G I  +  L     
Sbjct: 3247 EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFKINPKTGDISVSEVLDYELC 3304

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +++ + V+A D G  +   +  V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3305 KRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + V + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYVEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVHVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEAYRGNVKESDPPGEVVAVLS 2947



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N  SPVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNSPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 1796



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPEIYRFVVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV V V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYVEVEDVNDNAPLTSEPIY 1153



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  I  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTIKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN+P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNSPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENVAAGTKV 2515



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 38.9 bits (89), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNACVHENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V ATD   G+S  
Sbjct: 3159 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVWATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|196016717|ref|XP_002118209.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
 gi|190579184|gb|EDV19285.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
          Length = 3089

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
           LDR+     K +F V A    GT      VS+T+++ D NDNAPR    P  Q+   E  
Sbjct: 360 LDRE--EIAKHQFTVTATVNDGTTTLFSRVSVTIDVLDRNDNAPRFES-PSYQVSIPEDI 416

Query: 66  -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSG--VIETTGKLIAGEQ 121
                 +++ A DND   NA +TYSI  V++ G++  FR+   SG  +I+ +      ++
Sbjct: 417 PIGTTALQVRAQDNDASSNARVTYSI--VNSAGINSAFRVGVTSGAIIIDRSLDREITDR 474

Query: 122 YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           Y + +QATD+G      +S+ TI+   V   P    P F Q  Y V ++E A IN+ V T
Sbjct: 475 YHLEIQATDSGTTPKFARSNVTIIVTDVNDNP----PQFTQKNYKVTIAEDAKINTLVTT 530

Query: 177 I 177
           +
Sbjct: 531 V 531



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I+ + A D D   NA +TY I     T + +F+ID +SG I     L    +  +S+ V+
Sbjct: 832 ILTVTAKDADANENARLTYRIV----TPVREFKIDSKSGAISIAAALDRETRSTFSLEVR 887

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A+D G    S +T V +S++   N  +PVF Q +Y+ +++E   I + V  +  +
Sbjct: 888 ASDNGVPSLSGRTDVVISILDS-NDNAPVFSQPSYNASIAEDVEIGTRVLQVAAT 941



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+      F  +V A +    + S    + +++ D NDNAP    P       +  E 
Sbjct: 874  LDRE--TRSTFSLEVRASDNGVPSLSGRTDVVISILDSNDNAPVFSQPSYNASIAEDVEI 931

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
              +++++ ATD D GVN +I + +    N G   F ID  +GVI  T K +  E   +Y+
Sbjct: 932  GTRVLQVAATDKDEGVNQQIHFELAENEN-GNGTFAIDGSTGVIR-TAKALDRETVPEYT 989

Query: 124  ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            I V A D G   K S   V++++    ++  P F    YD  + E +   +TV  +
Sbjct: 990  IVVTAIDKGRPPKHSFATVKITITDVKDS-PPEFYPKEYDAYLPENSPAGTTVVQL 1044



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 12/177 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           ++   +LDR+  +  ++  ++ A +   T      ++T+ + D+NDN P+          
Sbjct: 461 IIIDRSLDREITD--RYHLEIQATDSGTTPKFARSNVTIIVTDVNDNPPQFTQKNYKVTI 518

Query: 63  AGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           A +A+    +  + ATD D   NA+I YS+      G +KF I+P +G I     L   +
Sbjct: 519 AEDAKINTLVTTVRATDPDNDDNADIRYSL-----AGQNKFTINPTNGRITLIASLDYEQ 573

Query: 121 Q--YSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
           Q  Y++ V A D G  S S T   V  V   N   P F  N Y  +V E   + S+V
Sbjct: 574 QQSYTLDVTAKDRGRPSLSNTTTVVVSVTDVNDNQPRFSSNVYQASVKEDIPVGSSV 630



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 13/133 (9%)

Query: 50  APRLPM-IPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS 107
           AP+ P  I    ++  E   RQIV++ ATD D   +  I YSI  VS     +F IDP+ 
Sbjct: 713 APKFPKSIYNADVREDEKVGRQIVQVTATDVD---SKTIYYSI--VSGNVRSRFGIDPQ- 766

Query: 108 GVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
           G I     +  +  ++Y++ VQA+D    S+ T V++ V+   N  +P F +  Y  ++ 
Sbjct: 767 GYIYLAAPIDYLREKEYTLVVQASDLLLNSTAT-VKMRVI-DTNNHAPTFDR-AYTADIY 823

Query: 166 EGASINSTVATIT 178
           E  +I + + T+T
Sbjct: 824 EDTAIGTVILTVT 836


>gi|426370122|ref|XP_004052021.1| PREDICTED: protocadherin Fat 3-like [Gorilla gorilla gorilla]
          Length = 3470

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1465 VITTERLDRE--NPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1522

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1523 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 1582

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 1583 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 1641

Query: 176  TITV 179
            T+ +
Sbjct: 1642 TLRI 1645



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 1930 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 1987

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 1988 -EFFLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 2044

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 2045 SSDHYNTCVYENTATKALLTRV 2066



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 430 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVVVNVEDANDHSPYFTNPLYEAS 487

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
             ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 488 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 545

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 546 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 604

Query: 176 TIT 178
            I+
Sbjct: 605 LIS 607



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 986  NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 1040

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 1041 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 1099

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 1100 DKPFYTASVNEDIRMNTPILSI 1121



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 151 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 209

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
             ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 210 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 267

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F +  Y+  V E   +   V  ++V
Sbjct: 268 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 299



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 2126 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 2181

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 2182 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 2239

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 2240 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 2273



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 12  VITAADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 69

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 70  VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 127

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 128 EQQAEHFLEVTVTDGGPAPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 178



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
           NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 751 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 807

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                 +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 808 PTYVGVEVLKVGATDPDSEVPPELTYSLIEGS---LDHFLIDSNSGVLTIKNNSLSKDHY 864

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + V+ +D  GK   T +   +V         F Q+ Y  ++SE
Sbjct: 865 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISE 906



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++ EATD D     +++Y+++  + +  + K
Sbjct: 365 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQFEATDRD--EKHKLSYTVHSSIDSISMRK 421

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 422 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVVVNVEDANDHSPYFTN 481

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S V  +T
Sbjct: 482 PLYEASVFESAALGSAVLQVT 502



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 1692 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 1743

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 1744 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 1803

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 1804 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 1860



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90  IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 615 IYEVKDGDINGIFTINPYSGVI-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 673

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 674 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 709



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 1178 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 1237

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++ D+G    SS+ +V + 
Sbjct: 1238 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHI- 1295

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1296 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1332



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 2012 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 2071

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 2072 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 2130

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 2131 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 2171



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 1286 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 1345

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 1346 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 1401

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 1402 ANLYSPAFSQSTYVAEVRENVAAGTKV 1428



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 1424 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 1480

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1481 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1522


>gi|54019434|ref|NP_955798.1| protocadherin alpha-2 precursor [Rattus norvegicus]
 gi|40645520|dbj|BAD06367.1| cadherin-related neuronal receptor 2 [Rattus norvegicus]
 gi|50512326|gb|AAT77558.1| protocadherin alpha 2 [Rattus norvegicus]
          Length = 948

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 13/193 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----I 56
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P     +
Sbjct: 193 FLVLGK-SLDRE--ENAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 249

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGK 115
           P ++  A      ++K+ A+D D G N+EI YS+   VS+T   KF+ID  SG I TTG+
Sbjct: 250 PLLENTANGTL--VIKLNASDADEGANSEIVYSLSSDVSSTTRTKFQIDANSGEIRTTGE 307

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
           L   E+  Y I + A+D G  S     ++SV +   N  +P     +  + V E A + +
Sbjct: 308 LDYEEKTSYEIQIIASDKGTPSMSGHCKISVKLMDINDNTPEVSITSLSLPVQENAPLGA 367

Query: 173 TVATITVSRLASG 185
            +A I+VS   SG
Sbjct: 368 VIALISVSDRDSG 380



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 7/165 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  Q+IA +K   + S    ++V L DINDN P + +     P+Q  A      I  I  
Sbjct: 316 YEIQIIASDKGTPSMSGHCKISVKLMDINDNTPEVSITSLSLPVQENA-PLGAVIALISV 374

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D G+N ++T S+  H+    +  F+ +  S V+++        +Y + V A D G  
Sbjct: 375 SDRDSGINGQVTCSLSPHLPFKLVSTFK-NYYSLVLDSALDRETTAEYKVMVTARDGGSP 433

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           S Q    +SV V   N  +P+F Q  Y V V E     + + T++
Sbjct: 434 SLQATATISVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVS 478



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 16/127 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   +  G +  ++V       
Sbjct: 531 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPML--LPHGAVGVGGSVSELVPRSVGSG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
               K+ A D D G NA ++Y +     T +  FR+   +G I TT  L  +   ++ + 
Sbjct: 589 HVVTKVHAVDADSGYNAWLSYELQPTVGTRI-PFRVGLYTGEISTTRALDEVDALRHRLL 647

Query: 126 VQATDTG 132
           V   D G
Sbjct: 648 VLVKDHG 654



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIE-ATDNDLGVNAEITYSIYHVSNTG 97
           V + DINDN P  PM   I IQ  E+R       +E A+D D+G NA ++Y +       
Sbjct: 121 VEVRDINDNPPLFPMTEKI-IQFFESRVLHSRFPLEGASDADIGANALLSYKLSPSEFFF 179

Query: 98  LHKFRIDPRS-GVIETTGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           L     D  S  +    GK +  E+ +   + + ATD G       V++ + V   N   
Sbjct: 180 LDVQTSDELSQSLFLVLGKSLDREENAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNE 239

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 240 PTFPQSVYKVPLLENTANGTLVIKLNASDADEG 272


>gi|427781127|gb|JAA56015.1| hypothetical protein [Rhipicephalus pulchellus]
          Length = 1400

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 22/187 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAPR  + P  Q   
Sbjct: 610 LAKELDYEDLRQPKSYSLIVTATEDSG-GFSTSVELTIKVTDVNDNAPRFEL-PDYQAHN 667

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+++ ATD D G NAE+TYS+          F ID R GV+ +  +L
Sbjct: 668 VDEDIAVGTS---ILQVSATDMDTGRNAELTYSL------DKEDFTIDSR-GVVYSNRRL 717

Query: 117 IA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            A     Y +TV+ATD G         + +     N  +P F Q+ Y  NV E A  ++ 
Sbjct: 718 DADVNNTYVLTVRATDRGEPPLTGTATIRIYTENKNDEAPKFSQDVYTPNVDENAGPSTL 777

Query: 174 VATITVS 180
           V T+  S
Sbjct: 778 VTTVVAS 784



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 22/189 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLT----VNLNDINDNAPRLP----MI 56
            +LD+D     K+   V AR+        A  P + T    V + D+NDN P         
Sbjct: 822  HLDKD-----KYELNVTARDDGACCRNGALTPHTSTALVVVFITDVNDNKPVFEECQTYT 876

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P ++ +  ++   ++K++A D D G N ++ YSI    N    KF +D  +G I T    
Sbjct: 877  PKVE-EGAQSGTSVIKVKARDLDKGHNGQVRYSIVQQPNQKGTKFSVDELTGEIRTNKVF 935

Query: 117  IA----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                  G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +   + 
Sbjct: 936  DREGDDGRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEYRENVKQDTQVG 995

Query: 172  STVATITVS 180
              +  ++ S
Sbjct: 996  IHILRVSAS 1004


>gi|397485377|ref|XP_003813824.1| PREDICTED: protocadherin Fat 3 [Pan paniscus]
          Length = 4557

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRE--NPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3075 -EFYLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 MMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            VS+ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VSINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         + ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTVIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E    Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKALDYEHTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFVINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++ D+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETMGSYWLTV 1118

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
             ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 38.9 bits (89), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENVAAGTKV 2515



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
 gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
          Length = 3556

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 2007 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPIFERYPY 2062

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 2063 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 2119

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV  FQ  TY V + E
Sbjct: 2120 QSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 2177



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 903  QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 962

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + ++TYS+   S  GL  F ID RSG +  +  L   + +++++ V ATD G  S  T +
Sbjct: 963  SGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNL 1020

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF+++ Y VNVSE  SIN+ +  +  S L +G
Sbjct: 1021 TILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTG 1066



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + ++++D+NDNAP +  P    + 
Sbjct: 1208 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1265

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L  
Sbjct: 1266 VREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDH 1325

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V A+D G    +T+  + V V   N   P F  ++    V E A++   V 
Sbjct: 1326 EERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVG 1385

Query: 176  TIT 178
            +I+
Sbjct: 1386 SIS 1388



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 454 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHA 511

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ +TYS+     T    F+IDP++G+I T   +  
Sbjct: 512 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 571

Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 572 ETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 631

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 632 KVSASDPDCGVNAM 645



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAPR  +      +
Sbjct: 1904 LSARPLDRE--QHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1961

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +V+I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1962 QEDAPLGT-SVVQISAVDADLGVNARLVYSL---ANETQWQFAIDGQSGLITTVGKLDRE 2017

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V ATD G    +S+   V+++V+   + R P+F++  Y
Sbjct: 2018 LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNR-PIFERYPY 2062



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 21/185 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
            R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 1001 RHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-DEYSVNVSESRSINAQIIQVN 1059

Query: 75   ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A+D D G NA ITY I              S+   H F I P SG I     L     ++
Sbjct: 1060 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDRETRDR 1118

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +TV ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S
Sbjct: 1119 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1178

Query: 181  RLASG 185
             L  G
Sbjct: 1179 DLDLG 1183



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 6/161 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  V+AR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 578 QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 637

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 638 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 696

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           +  ++++ +    + R PVF    Y V++ E    +S  ++
Sbjct: 697 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRESPKASSQASS 736



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI      
Sbjct: 2848 FRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD 2907

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+D  SG++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2908 ESSWKMFRVDSESGLV-TSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVE-IESRDEF 2965

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2966 TPQFTERTY 2974



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 11/148 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P         +   E      I  + A+D D G NA++ YSI    N
Sbjct: 1832 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1890

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID  SG  E + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1891 LG-NKFSIDSSSG--ELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1947

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F+ + Y  +V E A + ++V  I+
Sbjct: 1948 NAPRFKLSKYTGSVQEDAPLGTSVVQIS 1975



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 22/145 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIP 57
            LVV++  LDR+  +  +FR ++  R    TA++ P    +++ + + D+NDNAP  P   
Sbjct: 1435 LVVARL-LDREVQS--EFRLEI--RALDTTASNNPQSSAITVKIEVADVNDNAPEWPQ-D 1488

Query: 58   PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRS 107
            PI +Q  EA      I    ATD D G N ++ Y +              +  FR+D  +
Sbjct: 1489 PIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLT 1548

Query: 108  GVIETTGKLI--AGEQYSITVQATD 130
            G +     L   A ++Y + VQA D
Sbjct: 1549 GALSLQAPLDFEAVQEYLLIVQALD 1573



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 27/197 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEAT 76
            ++   VIA +    A +V   LTV +ND NDNAP  L   PP       A  +I +  + 
Sbjct: 2500 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSV 2556

Query: 77   DNDL-----------GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGE 120
            D DL           G N+++ Y I          F + P +GV+      +     +  
Sbjct: 2557 DFDLLTVNATDADSEGNNSKVIYII----EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSG 2612

Query: 121  QYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y + + A D G  +  S T++ V      + RS  F QN Y   +SE A + S V  + 
Sbjct: 2613 DYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQ-FLQNQYRAQISEAAPLGSVVLQLG 2671

Query: 179  VSRLASGCAIMNKEENS 195
               L    AI+   E S
Sbjct: 2672 QDALDQSLAIIAGNEES 2688



 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  V+A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1111 LDRETRD--RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1168

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1224

Query: 125  TVQATDTG 132
             V+A D G
Sbjct: 1225 VVEARDQG 1232



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 270 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 326

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 327 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 386

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 387 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 421



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 683 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKASSQASST--P 738

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +   +    + + 
Sbjct: 739 IVAVVATDPDYGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 796

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
           + ATD G   S    +V +S++     R P+F++  Y+  V E    G  + S +A
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA 851



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P + R  ++AR       +    L + L D NDN+P+      +  +  G  +   V ++
Sbjct: 2285 PNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQV 2344

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + ATD
Sbjct: 2345 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 2402

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + V +V   N   P F  N   V VSE   + + + +I+
Sbjct: 2403 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2450



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 29/168 (17%)

Query: 38   SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            S+TV L   D ND+AP              +      + GE    IV   A D D G N 
Sbjct: 1585 SVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1641

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---K 134
            ++TY I      G  +FRI+ ++G+IE        T  +  G ++++ + A D G    K
Sbjct: 1642 QLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPK 1699

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             S   + + +V G +   P F Q  Y   + E     S V  +T   L
Sbjct: 1700 KSSLNLHL-IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1746


>gi|297268957|ref|XP_001084587.2| PREDICTED: protocadherin Fat 3 [Macaca mulatta]
          Length = 4557

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRE--NPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCEQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q  + + ++   N   PVF
Sbjct: 3075 -EFFLDPESGELKTLA-LLDRERVPVYSLMAKATDGGGRFCQANIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  + E  +  + +  +
Sbjct: 3132 SSDHYNACIYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSTVISEDALVGDSV 3360



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDISVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + + + D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFAVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K++  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKVLDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKTQVTISIEDANDHTPEFQQPLYDANVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVTNKEGDLKTQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD NV+E   + ++V T++ S    G
Sbjct: 476 LYDANVNESVPVGTSVLTVSASDKDKG 502



 Score = 42.4 bits (98), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQANIHLILEDVNDNPPVFSSDHYNACIYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
            Precursor
          Length = 3503

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 1954 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPIFERYPY 2009

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 2010 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 2066

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV  FQ  TY V + E
Sbjct: 2067 QSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 2124



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 850  QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 909

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + ++TYS+   S  GL  F ID RSG +  +  L   + +++++ V ATD G  S  T +
Sbjct: 910  SGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNL 967

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF+++ Y VNVSE  SIN+ +  +  S L +G
Sbjct: 968  TILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTG 1013



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + ++++D+NDNAP +  P    + 
Sbjct: 1155 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1212

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L  
Sbjct: 1213 VREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDH 1272

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V A+D G    +T+  + V V   N   P F  ++    V E A++   V 
Sbjct: 1273 EERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVG 1332

Query: 176  TIT 178
            +I+
Sbjct: 1333 SIS 1335



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 401 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHA 458

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ +TYS+     T    F+IDP++G+I T   +  
Sbjct: 459 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 518

Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 519 ETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 578

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 579 KVSASDPDCGVNAM 592



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAPR  +      +
Sbjct: 1851 LSARPLDRE--QHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1908

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +V+I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1909 QEDAPLGT-SVVQISAVDADLGVNARLVYSL---ANETQWQFAIDGQSGLITTVGKLDRE 1964

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V ATD G    +S+   V+++V+   N   P+F++  Y
Sbjct: 1965 LQASYNFMVLATDGGRYEVRSATVPVQINVL-DINDNRPIFERYPY 2009



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 21/185 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
            R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 948  RHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-DEYSVNVSESRSINAQIIQVN 1006

Query: 75   ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A+D D G NA ITY I              S+   H F I P SG I     L     ++
Sbjct: 1007 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDRETRDR 1065

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +TV ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S
Sbjct: 1066 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1125

Query: 181  RLASG 185
             L  G
Sbjct: 1126 DLDLG 1130



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 6/161 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  V+AR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 525 QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 584

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 585 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 643

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           +  ++++ +    + R PVF    Y V++ E    +S  ++
Sbjct: 644 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRESPKASSQASS 683



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI      
Sbjct: 2795 FRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD 2854

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+D  SG++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2855 ESSWKMFRVDSESGLV-TSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVE-IESRDEF 2912

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2913 TPQFTERTY 2921



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 11/148 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P         +   E      I  + A+D D G NA++ YSI    N
Sbjct: 1779 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1837

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID  SG  E + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1838 LG-NKFSIDSSSG--ELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1894

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F+ + Y  +V E A + ++V  I+
Sbjct: 1895 NAPRFKLSKYTGSVQEDAPLGTSVVQIS 1922



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 22/145 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIP 57
            LVV++  LDR+  +  +FR ++  R    TA++ P    +++ + + D+NDNAP  P   
Sbjct: 1382 LVVARL-LDREVQS--EFRLEI--RALDTTASNNPQSSAITVKIEVADVNDNAPEWPQ-D 1435

Query: 58   PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRS 107
            PI +Q  EA      I    ATD D G N ++ Y +              +  FR+D  +
Sbjct: 1436 PIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLT 1495

Query: 108  GVIETTGKLI--AGEQYSITVQATD 130
            G +     L   A ++Y + VQA D
Sbjct: 1496 GALSLQAPLDFEAVQEYLLIVQALD 1520



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 27/197 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEAT 76
            ++   VIA +    A +V   LTV +ND NDNAP  L   PP       A  +I +  + 
Sbjct: 2447 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSV 2503

Query: 77   DNDL-----------GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGE 120
            D DL           G N+++ Y I          F + P +GV+      +     +  
Sbjct: 2504 DFDLLTVNATDADSEGNNSKVIYII----EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSG 2559

Query: 121  QYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y + + A D G  +  S T++ V      + RS  F QN Y   +SE A + S V  + 
Sbjct: 2560 DYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQ-FLQNQYRAQISEAAPLGSVVLQLG 2618

Query: 179  VSRLASGCAIMNKEENS 195
               L    AI+   E S
Sbjct: 2619 QDALDQSLAIIAGNEES 2635



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  V+A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1058 LDRETRD--RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1115

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 1116 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1171

Query: 125  TVQATDTG 132
             V+A D G
Sbjct: 1172 VVEARDQG 1179



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 217 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 273

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 274 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 333

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 334 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 368



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 630 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKASSQASST--P 685

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +   +    + + 
Sbjct: 686 IVAVVATDPDYGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 743

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
           + ATD G   S    +V +S++     R P+F++  Y+  V E    G  + S +A
Sbjct: 744 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA 798



 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P + R  ++AR       +    L + L D NDN+P+      +  +  G  +   V ++
Sbjct: 2232 PNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQV 2291

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + ATD
Sbjct: 2292 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 2349

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + V +V   N   P F  N   V VSE   + + + +I+
Sbjct: 2350 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2397



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 29/168 (17%)

Query: 38   SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            S+TV L   D ND+AP              +      + GE    IV   A D D G N 
Sbjct: 1532 SVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1588

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---K 134
            ++TY I      G  +FRI+ ++G+IE        T  +  G ++++ + A D G    K
Sbjct: 1589 QLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPK 1646

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             S   + + +V G +   P F Q  Y   + E     S V  +T   L
Sbjct: 1647 KSSLNLHL-IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1693


>gi|66773216|ref|NP_001019371.1| protocadherin 2 gamma 28 precursor [Danio rerio]
 gi|51557455|gb|AAU06414.1| protocadherin cluster 2 gamma 28 [Danio rerio]
          Length = 957

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 14/165 (8%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
           +K GT     V + V + D NDNAP   LP+      +       +VK+ ATDND G N 
Sbjct: 230 QKTGT-----VRICVTVIDANDNAPVFSLPVYRVSLFENAPNGAVVVKVSATDNDQGANG 284

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG--KSSQTIV 140
           EITYS    S   L  F I   +G I   G L     +Q+ + + ATD GG   SS+ I+
Sbjct: 285 EITYSFSRSSGKNLDLFHIGANTGEITVKGHLDYERAKQFELNIDATDKGGLTDSSKVII 344

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +++ V   N   PV    ++   + E A+  + +A + V  L SG
Sbjct: 345 DITDV---NDNPPVISLISFSNPIPEDAAPETVIAMLNVKDLDSG 386



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP 58
           Y +++ + LDR+     ++   V A ++   + S   +LT+ ++D+NDNAP         
Sbjct: 411 YSLITDQLLDRE--KISEYNITVTATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTA 468

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGK 115
             ++       ++ ++A D D G NA I+Y +  V   G+       ++  SG I    +
Sbjct: 469 FIMENNSPGVSVLSVKAHDRDSGNNARISYFLEDVVVNGVSASTFISVNAESGEI-LAAR 527

Query: 116 LIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
               EQ   +SI V+A D G     + V V ++
Sbjct: 528 SFDYEQTKDFSIRVKAQDGGSPPLSSNVSVKIL 560


>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
          Length = 3503

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 1954 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPIFERYPY 2009

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 2010 IGQVPALIQPGQT---LLKVQAIDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 2066

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV  FQ  TY V + E
Sbjct: 2067 QSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 2124



 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 850  QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 909

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + ++TYS+   S  GL  F ID RSG +  +  L   + +++++ V ATD G  S  T +
Sbjct: 910  SGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNL 967

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF+++ Y VNVSE  SIN+ +  +  S L +G
Sbjct: 968  TILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTG 1013



 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + ++++D+NDNAP +  P    + 
Sbjct: 1155 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1212

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L  
Sbjct: 1213 VREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDH 1272

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V A+D G    +T+  + V V   N   P F  ++    V E A++   V 
Sbjct: 1273 EERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVG 1332

Query: 176  TIT 178
            +I+
Sbjct: 1333 SIS 1335



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 401 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHA 458

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ +TYS+     T    F+IDP++G+I T   +  
Sbjct: 459 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 518

Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 519 ETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 578

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 579 KVSASDPDCGVNAM 592



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAPR  +      +
Sbjct: 1851 LSARPLDRE--QHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1908

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +V+I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1909 QEDAPLGT-SVVQISAVDADLGVNARLVYSL---ANETQWQFAIDGQSGLITTVGKLDRE 1964

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V ATD G    +S+   V+++V+   + R P+F++  Y
Sbjct: 1965 LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNR-PIFERYPY 2009



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 21/185 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
            R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 948  RHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-DEYSVNVSESRSINAQIIQVN 1006

Query: 75   ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A+D D G NA ITY I              S+   H F I P SG I     L     ++
Sbjct: 1007 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDRETRDR 1065

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +T+ ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S
Sbjct: 1066 YQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1125

Query: 181  RLASG 185
             L  G
Sbjct: 1126 DLDLG 1130



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 6/161 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  V+AR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 525 QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 584

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 585 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 643

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           +  ++++ +    + R PVF    Y V++ E    +S  ++
Sbjct: 644 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRESPKASSQASS 683



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P  R      + I        I  + A+D D G NA++ YSI    N
Sbjct: 1779 TIYITVGDVNDNSPEFRPGSCYGLSIPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1837

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID  SG  E + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1838 LG-NKFSIDSSSG--ELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1894

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F+ + Y  +V E A + ++V  I+
Sbjct: 1895 NAPRFKLSKYTGSVQEDAPLGTSVVQIS 1922



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI      
Sbjct: 2795 FRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD 2854

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    F++D  SG++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2855 ESSWKMFQVDSESGLV-TSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVE-IESRDEF 2912

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2913 TPQFTERTY 2921



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 27/197 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEAT 76
            ++   VIA +    A +V   LTV +ND NDNAP  L   PP       A  +I +  + 
Sbjct: 2447 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSV 2503

Query: 77   DNDL-----------GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGE 120
            D DL           G N+++ Y I          F + P +GV+      +     +  
Sbjct: 2504 DFDLLTVNATDADSEGNNSKVIYII----EPAQEGFTVHPSNGVVSVNMSRLQPAVSSSG 2559

Query: 121  QYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y + + A D G  +  S T++ V      + RS  F QN Y   +SE A + S V  + 
Sbjct: 2560 DYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQ-FLQNQYRAQISEAAPLGSVVLQLG 2618

Query: 179  VSRLASGCAIMNKEENS 195
               L    AI+   E S
Sbjct: 2619 QDALDQSLAIIAGNEES 2635



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 22/145 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIP 57
            LVV++  LDR+  +  +FR ++  R    TA++ P    +++ + + D+NDNAP  P   
Sbjct: 1382 LVVARL-LDREVQS--EFRLEI--RALDTTASNNPQSSAITVKIEVADVNDNAPEWPQ-D 1435

Query: 58   PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRS 107
            PI +Q  EA      I    ATD D G N ++ Y +              +  F +D  +
Sbjct: 1436 PIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFSMDSLT 1495

Query: 108  GVIETTGKLI--AGEQYSITVQATD 130
            G +     L   A ++Y + VQA D
Sbjct: 1496 GALSLQAPLDFEAVQEYLLIVQALD 1520



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 217 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 273

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 274 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 333

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 334 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 368



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  ++A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1058 LDRETRD--RYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1115

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 1116 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1171

Query: 125  TVQATDTG 132
             V+A D G
Sbjct: 1172 VVEARDQG 1179



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 26/176 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 630 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKASSQASST--P 685

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG----EQYSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +        + + 
Sbjct: 686 IVAVVATDPDYGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 743

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
           + ATD G   S    +V +S++     R P+F++  Y+  V E    G  + S +A
Sbjct: 744 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA 798



 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P + R  ++AR       +    L + L D NDN+P+      +  +  G  +   V ++
Sbjct: 2232 PNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVSQV 2291

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + ATD
Sbjct: 2292 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 2349

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + V +V   N   P F  N   V VSE   + + + +I+
Sbjct: 2350 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2397



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 29/168 (17%)

Query: 38   SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            S+TV L   D ND+AP              +      + GE    IV   A D D G N 
Sbjct: 1532 SVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1588

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---K 134
            ++TY I      G  +FRI+ ++G+IE        T  +  G ++++ + A D G    K
Sbjct: 1589 QLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIISAKDHGQPEPK 1646

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             S   + + +V G +   P F Q  Y   + E     S V  +T   L
Sbjct: 1647 KSSLNLHL-IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKPL 1693


>gi|355752536|gb|EHH56656.1| hypothetical protein EGM_06114 [Macaca fascicularis]
          Length = 4589

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRE--NPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCEQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q  + + ++   N   PVF
Sbjct: 3075 -EFFLDPESGELKTLA-LLDRERVPVYSLMAKATDGGGRFCQANIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  + E  +  + +  +
Sbjct: 3132 SSDHYNACIYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSTVISEDALVGDSV 3360



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDISVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + + + D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFAVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K++  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKVLDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKTQVTISIEDANDHTPEFQQPLYDANVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVTNKEGDLKTQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD NV+E   + ++V T++ S    G
Sbjct: 476 LYDANVNESVPVGTSVLTVSASDKDKG 502



 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQANIHLILEDVNDNPPVFSSDHYNACIYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|344287782|ref|XP_003415631.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Loxodonta
            africana]
          Length = 4556

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2551 VLTTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQAMDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2668

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2669 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2727

Query: 176  TITV 179
            T+ +
Sbjct: 2728 TLRI 2731



 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 3016 VTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKVSAKDADIGSNGDIRYSLY---GSGN 3072

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            ++F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ V + ++   N   PVF
Sbjct: 3073 NEFFLDPESGELKTLA-LLDRERVPVYSLIARATDGGGRFCQSDVHL-ILEDVNDNPPVF 3130

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3131 SSDHYNACVYENTATKALLTRV 3152



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 ILYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  L 
Sbjct: 1574 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDLT 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1632 TMSQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            +++ ++ LDR+  +      Q    +  G A S   ++T+ + DINDN P       L  
Sbjct: 3185 IIILEQPLDRELQSSYSISVQA-TDQSPGQALSSFTTVTITVLDINDNPPVFERRDYLVT 3243

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I  +  
Sbjct: 3244 VP----EDTSPGTQVLTVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVSEV 3297

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L     +++ + V+A D G  +   +  VS+ +   N   P F Q+ Y   +SE A +  
Sbjct: 3298 LDYELCKKFYLVVEAKDGGIPALSAVATVSINLTDVNDNPPKFSQDIYSAVISEDALVGD 3357

Query: 173  TV 174
            +V
Sbjct: 3358 SV 3359



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1354 PSPIPLTFDEPFYNFTVMENDRVTEIVGVVSV 1385



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 816 LTINVEDANDNNPIF-----LQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 870

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L    Q  YS+ ++A D      Q    V++   + 
Sbjct: 871 ----TDTQQFGINSSTGIVYVADQLDRESQSNYSLKIEARDKSESGQQLFSVVTLKVFLD 926

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1098 VITTADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIFYPV 1155

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1156 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLIMTTSRKLDR 1213

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1214 EQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1264



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    +     
Sbjct: 2072 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----ILQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S    VE+ +    N   PVF
Sbjct: 2127 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILARDGGKPSLSASVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++ + +I
Sbjct: 2186 DKPFYTASINEDIRMDTPILSI 2207



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YSLIARATDGGGRFCQSDVHLILEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+G+N ++ YS+   +++    F ID  SG+I     L    Q  YSI+VQATD      
Sbjct: 3158 DVGINRKVVYSL---ADSADGFFSIDGLSGIIILEQPLDRELQSSYSISVQATDQSPGQA 3214

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS T V ++V+   N   PVF++  Y V V E  S  + V T+
Sbjct: 3215 LSSFTTVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTQVLTV 3257



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  + +  + K
Sbjct: 1451 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDSVSMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +G++ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1508 FRIDPSTGILYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTS 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSAVLQVT 1588



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1837 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1893

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++++ ATD D  V  E+TYS+   S   L +F ID  SGV+      ++ + Y
Sbjct: 1894 PTYVGVEVLRVSATDPDSEVPPELTYSLKEGS---LDQFFIDSISGVLTIKNNNLSKDHY 1950

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V  +D  GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1951 MLIVTVSD--GKFHSTAMINIMVKEAMDSGLHFTQSVYSTSISENSTNITKVAIV 2003



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2264 TGARAEVTVDLLVNDVNDNPPIFDEPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD+G    SS+ +V + 
Sbjct: 2324 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCTLKVRATDSGFPSLSSEVLVHI- 2381

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
             +   N   P+F Q  Y+  VSE A
Sbjct: 2382 YISDINDNPPIFNQLIYESYVSELA 2406



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
            +V   + LDR+  +    + +   + + G      V+L V L+D+ND +P  +P    ++
Sbjct: 884  IVYVADQLDRESQSNYSLKIEARDKSESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVK 943

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            + +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L   
Sbjct: 944  VLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELDYE 1000

Query: 120  EQ--YSITVQATDTG 132
            +Q  Y++TV+A D G
Sbjct: 1001 KQQFYNLTVRAKDKG 1015



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+ + D ND+ P    P+      ++      ++ + A+D D G N  ITYSI   ++ 
Sbjct: 457 VTIGIEDANDHTPEFQQPLYEAFVNESVPVGTSVLTVSASDKDKGENGYITYSI---ASL 513

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            L  F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 514 NLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 573

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 574 SPLFEK 579



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFDTSSYETIIMEGMPVG 2829

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS+   S     +  F ID  +G I T   L       ++
Sbjct: 2830 TKLTQVRALDMDWGANGQVTYSLQSDSQPEKVMEAFNIDTNTGWISTLKDLDHETDPTFT 2889

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  ++ V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2890 FSVVASDLGEAFSLSSTALISVRVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 90   IYHVSNTGLH-KFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + VV
Sbjct: 1701 IYEVKDGNVDGMFTINPYSGVI-TTRKALDYERSSSYQLIIQATNMAGMASNATVNIQVV 1759

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               N  +PVF  + Y  ++SE A +NS V
Sbjct: 1760 -DENDNAPVFLFSQYSGSLSEAAPVNSIV 1787



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI TT  ++  E    Y +TV
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVI-TTADILDRETMGSYWLTV 1117

Query: 127  QATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
             ATD G     + +EV +         P T  P+F
Sbjct: 1118 YATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIF 1152



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  S   L  F 
Sbjct: 149 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKSKVDL--FS 204

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 205 VHPTSGVISLSGRLNYDEKSRYDLEILAVDRGMK 238



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V +++A+D 
Sbjct: 2361 LKVRATDSGFPSLSSEVLVHIYISDINDNPPIFNQLIYESYVSELAPRGHFVTRVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+ Y   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSMYVAEVRENAAAGTKV 2514



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREQTDLYLLNIT 801

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  +P+F Q++Y VN+ E +SI + +  +
Sbjct: 802 IYDLGNPQKSSWRLLTINV-EDANDNNPIFLQDSYSVNILESSSIGTEIIQV 852



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  I  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 419 FKINPRSGLIVTAQPLNTIKKEVYKLGVTNREGDLKAQVTI----GIEDANDHTPEFQQP 474

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+  V+E   + ++V T++ S    G
Sbjct: 475 LYEAFVNESVPVGTSVLTVSASDKDKG 501



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 2510 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLID-SNGQVLTTERLDRENPLEGD 2566

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2567 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2608


>gi|355566954|gb|EHH23333.1| hypothetical protein EGK_06782, partial [Macaca mulatta]
          Length = 3492

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1455 VITTERLDRE--NPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1512

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1513 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 1572

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 1573 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 1631

Query: 176  TITV 179
            T+ +
Sbjct: 1632 TLRI 1635



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 1920 VSVSDVNDNSPVCEQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 1977

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q  + + ++   N   PVF
Sbjct: 1978 -EFFLDPESGELKTLA-LLDRERVPVYSLMAKATDGGGRFCQANIHL-ILEDVNDNPPVF 2034

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  + E  +  + +  +
Sbjct: 2035 SSDHYNACIYENTATKALLTRV 2056



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 420 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 477

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
             ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 478 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 535

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 536 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 594

Query: 176 TIT 178
            I+
Sbjct: 595 LIS 597



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 976  NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 1030

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 1031 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 1089

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 1090 DKPFYTASVNEDIRMNTPILSI 1111



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 141 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 199

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
             ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 200 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 257

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F +  Y+  V E   +   V  ++V
Sbjct: 258 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 289



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 2116 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 2171

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 2172 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 2229

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 2230 VNINLTDVNDNPPKFSQDVYSTVISEDALVGDSV 2263



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 2   VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 59

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 60  VMENSPKDISVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 117

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 118 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 168



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
           NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 741 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 797

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                 +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 798 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 854

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + V+ +D  GK   T +   +V         F Q+ Y  ++SE
Sbjct: 855 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISE 896



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 355 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 411

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 412 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 471

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S V  +T
Sbjct: 472 PLYEASVFESAALGSAVLQVT 492



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + + + D+NDN P         I ++     
Sbjct: 1682 FHFKV--------AATIPLDKVDIVFAVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 1733

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 1734 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 1793

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 1794 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 1850



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)

Query: 90  IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           IY V +  ++  F I+P SGVI TT K++  E+   Y + +QAT+  G +S   V + +V
Sbjct: 605 IYEVKDGDINGIFTINPYSGVI-TTRKVLDYERTSSYQLIIQATNMAGMASNATVNIQIV 663

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 664 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 699



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 1168 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 1227

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 1228 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHI- 1285

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1286 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1322



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 1276 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 1335

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 1336 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 1391

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 1392 ANLYSPAFSQSTYVAEVRENAAAGTKV 1418



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 2002 YSLMAKATDGGGRFCQANIHLILEDVNDNPPVFSSDHYNACIYENTATKALLTRVQAVDP 2061

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 2062 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 2120

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 2121 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 2161



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 1414 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 1470

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1471 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1512


>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
          Length = 4588

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       + +A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-FEVN 2604

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI  
Sbjct: 2605 IGSSAPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRASGVITTKESLIGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V V  P  R P F +  Y   VSE   I + +  
Sbjct: 2665 ENEVFTFFVRAVDNGSPQRESVVPVYVKVLPPEMRLPRFSEPFYTYTVSEDVPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3248 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  VS+ V   N  +PVF Q+TY   VSE A +  +V T+
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITV 3357



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN P         
Sbjct: 2976 WKVYVKKPLDREERD--SYLLTITATD--GTFSSKAI-VEVKVLDANDNTPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T+ 
Sbjct: 3031 TIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTSA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQAAYHLLVKATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYTITVFE 3136



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVLSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1607 G-NSFTIDPILGSIKTARELDRSNQVAYDLMVKATDRGDPPMSEITSVRVFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE   I S V  +T    +S
Sbjct: 1666 KFTSKEYSVEISETVGIGSFVGMVTAHSQSS 1696



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVKATDGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---- 132
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G    
Sbjct: 3153 DAGLNRKISYSLL---NSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRR 3209

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++ TIV +SV+   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTATGTIV-ISVL-DINDNPPVFEYREYGATVSEDILIGTEVLQV 3252



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN P+   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 911  VILKVSLDDVNDNPPKF--IPPNYRVKVREDLPEGTIIMWLEAHDPDLGQSSQVRYSLL- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 968  --DHGEGNFDVDKLSGAVRIIQQLDFEKKQVYNLTVRAKDKGKPISLSSTCYVEVEVIDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N   PVF        V E A + S+V  ++
Sbjct: 1026 NENLHPPVFPSFVEKGAVKENAPLGSSVMKVS 1057



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVN 83
            P+SL+      V + D+N+N    P + P  ++ G  +        ++K+ A D D+G +
Sbjct: 1009 PISLSSTCYVEVEVIDVNENLH--PPVFPSFVEKGAVKENAPLGSSVMKVSARDEDMGRD 1066

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
             EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV A+D G     + VE
Sbjct: 1067 GEIHYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVYASDQGVVPLSSFVE 1124

Query: 142  VSVV------PGPNTRSPVF 155
            V +         P T  PV+
Sbjct: 1125 VYIEVEDVNDNAPQTSEPVY 1144



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I+ ++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGF--FSINSKTGLITTTARKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++++N+ DINDNAP         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I Y+I    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYAIID-GNQG-SPFTIDPARGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G     T   V++ V   N  +PVF +  Y + + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRGNYSLIIQENKPVGFSVLQLVVT 3465



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            F+F V+AR   G     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2774 FQFSVLARCTHGDYELVASVDVSIQVK--DTNDNSPVLESSPYEAFIVENLPAGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ Y++    +   +  F ++  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDLDSGSNGQVMYNLDQSQSVDVIESFAVNMETGWITTLRELDHEKRDSYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G K   SS  IV+V+V    N   P F    Y   VSE       +A ++ +
Sbjct: 2892 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPPGGVIAIVSTT 2943



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  + YSI     
Sbjct: 808 LEIRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVRYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF ID  +GV++    L   EQ  + + V+A D   +  Q     I++VS +   N
Sbjct: 863 TDTDKFSIDSMTGVVKILNPLDREEQQVHYLKVEARDQAREEPQLLSTVILKVS-LDDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQ 127
            +  + A D D     ++ YSI  +S      F ID ++G+I  +   +      YS+ V 
Sbjct: 2409 VTCVRAYDADSSDADKLEYSI--LSGNDHKNFVIDGKTGIITLSNLRRHALKPSYSLQVS 2466

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D   +SS   V V+V+ G N  SP+F QN Y+V ++E A +++ V  +  S   SG
Sbjct: 2467 ASDGVFRSSAQ-VHVTVIGG-NLHSPLFLQNEYEVELAENAPLHTLVTEVKASDGDSG 2522



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  IQ  E +     ++ + ATD D G N ++ Y++   +      
Sbjct: 707 HSVNAHAPQFRSTLPAGIQVKENQPVGSSLLVMNATDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  +G+++    L     ++Y++ +  +D G   +++  ++E+ V+   N   P F 
Sbjct: 765 FIMDMETGMLKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 824 QESYFVEVSEDKEINSEI 841



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+ T V V ++   N   P+F Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPIYTLTIQGTNMAGLSTNTTVLVHLL-DENDNLPLFVQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 124 EKNTNAEARTQVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 183

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             YS    ++     F I P SG I  TG+L   E   Y + + A D G K
Sbjct: 184 FYYSFKDRTDM----FAIHPTSGTIVLTGRLDYTETSVYEMEILAVDRGMK 230



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1529 ILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 19/159 (11%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYATTLSEASVIGTSVVQVRATDADSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQT 138
             N  I+Y +    +     F +D  +G+I     L   +  Q+ I+V+A D G    S  
Sbjct: 2314 PNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDYEQFRQHQISVRAVDGGMPPLSSD 2373

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V    V   N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VVVTVDVTDLNDHPPLFDQQLYEARISEHAAHGHFVTCV 2412



 Score = 38.9 bits (89), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSTSLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               ++V + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1894 RGVKVVAVNATDADSSAFSQLMYSITE-GNIG-EKFLMDRKTGTITVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   ++++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFASFAAIKINVKESKESQLK-FTQDFYSAIVKENSTEARTLAVIT 2002



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++A+D D G+   +TY I  V++    +F  + R G I T  KL     A +   I 
Sbjct: 2511 VTEVKASDGDSGIYGHVTYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVIPIR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              A D GGK +   + V ++   N  +P F+   ++VN+   A   ++V  +  S    G
Sbjct: 2568 FMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKFEVNIGSSAPKGTSVIKVLASDADEG 2626


>gi|386118337|gb|AFI99116.1| seven transmembrane protocadherin flamingo [Clytia hemisphaerica]
          Length = 2923

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEA 75
           +F   + A +    + S   ++ V + D+NDNAP        I +  G+ A + I+ + A
Sbjct: 300 RFSIDIRAIDLNDPSNSATTTIRVKVLDVNDNAPTFAESSYSITVDEGQVANKYILTVRA 359

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G N EI YSI + +N  +  F+IDP SG I++T  L       Y+ TV+A D G 
Sbjct: 360 TDADEGSNQEIRYSIVNKANVQV-PFQIDPISGAIKSTDVLDRETHPYYNFTVRAEDQGK 418

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               T V VS+ +   N  SP F ++ Y +++ E  ++ S V  +
Sbjct: 419 VKLHTDVSVSITLRDKNDNSPKFSKDVYKLSIPENTTVGSVVFKL 463



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 27/174 (15%)

Query: 3   VVSKENLDRDPPNPGKF-RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------- 54
           ++ KE +D D     +F RF V+A +K          + + + D+NDNAPR         
Sbjct: 496 IILKEAVDFDKYQ--RFSRFTVVAFDKGSPPKYANTEVEITIEDVNDNAPRFAKRIFERT 553

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGV 109
             ++  I++ +      + K+ A D D G N +IT+ +      GL +   F +DP+SG 
Sbjct: 554 SDIMEDIKVGSF-----VYKLSARDRDSGPNGDITFKL----EDGLPQDFPFELDPKSGE 604

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
           I  +  L     + Y   V A D G    +   +V    G  N  +P F+Q++Y
Sbjct: 605 ITVSKGLDYETTKSYKFGVIAVDNGHPPKKDTTQVVFNIGNVNDNNPKFKQSSY 658



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 12/182 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++  K +LD    N    + +V   +K+   A   + +T    D N+N+PR    +    
Sbjct: 709 VLFLKCDLDYKRKNMYNLKLRVTDADKKPGYAYFKIEVT----DANNNSPRFGQDVYQWN 764

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            ++  +    I  + ATD D G NA ITYS+     + +  F I   +G I T  KL   
Sbjct: 765 VLENADIGTVIKSVLATDADTGENARITYSLQ--PGSPIDTFGIVNDTGAITTKKKLDRE 822

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             + Y++ V+A+D G   K       V  V   N   P F +N Y   + E A I + V 
Sbjct: 823 TTKSYTLVVKASDHGKPFKKFGFATVVITVTDVNDNKPAFTKNLYTFTIEEDAKIGAVVG 882

Query: 176 TI 177
            +
Sbjct: 883 HL 884



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
           ++ + + D+NDN P     +    I+       +V  ++ATDND G N E+ Y      +
Sbjct: 847 TVVITVTDVNDNKPAFTKNLYTFTIEEDAKIGAVVGHLQATDNDEGRNKEVRYQFKERKH 906

Query: 96  TGLHKFRIDPRSGVIETTGKLIAG---EQYSITVQATDTGGKSSQT----IVEVSVVPGP 148
                F I+  SG I T  KL+     E+++  V A D G  + QT    I+++  V   
Sbjct: 907 ---EYFSINAESGSIRTI-KLLDRETIERFTFEVLAIDQGTPALQTSTSVIIDIEDVQDS 962

Query: 149 NTRSPVFQQNTYDVNVSEGASI 170
           N   PVF +  Y+  + E + +
Sbjct: 963 N---PVFTEKVYNFTIPENSLV 981



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
           F+V+ R ++    ++P+    +L   DI ++  R  +I  +++  G  +    K E    
Sbjct: 218 FEVLVRRRR----NIPIYFEKSLYSVDIFEDTKRDSVIRKLKVNGGSGKYSFSKTEDPKT 273

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTG--G 133
           D+                    F++   +G   +++   +    E++SI ++A D     
Sbjct: 274 DI-------------------LFKVKSDTGDVILLQELNREDGAERFSIDIRAIDLNDPS 314

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            S+ T + V V+   N  +P F +++Y + V EG   N  + T+  +    G
Sbjct: 315 NSATTTIRVKVL-DVNDNAPTFAESSYSITVDEGQVANKYILTVRATDADEG 365


>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
          Length = 4588

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       + +A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-FEVN 2604

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI  
Sbjct: 2605 IGSSAPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRASGVITTKESLIGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V V  P  R P F +  Y   VSE   I + +  
Sbjct: 2665 ENEVFTFFVRAVDNGSPQRESVVPVYVKVLPPEMRLPRFSEPFYTYTVSEDVPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3248 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  VS+ V   N  +PVF Q+TY   VSE A +  +V T+
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITV 3357



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN P         
Sbjct: 2976 WKVYVKKPLDREERD--SYLLTITATD--GTFSSKAI-VEVKVLDANDNTPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T+ 
Sbjct: 3031 TIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTSA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQAAYHLLVKATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYTITVFE 3136



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVLSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1607 G-NSFTIDPILGSIKTARELDRSNQVAYDLMVKATDRGDPPMSEITSVRVFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE   I S V  +T    +S
Sbjct: 1666 KFTSKEYSVEISETVGIGSFVGMVTAHSQSS 1696



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVKATDGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---- 132
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G    
Sbjct: 3153 DAGLNRKISYSLL---NSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRR 3209

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++ TIV +SV+   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTATGTIV-ISVL-DINDNPPVFEYREYGATVSEDILIGTEVLQV 3252



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN P+   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 911  VILKVSLDDVNDNPPKF--IPPNYRVKVREDLPEGTIIMWLEAHDPDLGQSSQVRYSLL- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 968  --DHGEGNFDVDKLSGAVRIIQQLDFEKKQVYNLTVRAKDKGKPISLSSTCYVEVEVIDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N   PVF        V E A + S+V  ++
Sbjct: 1026 NENLHPPVFPSFVEKGAVKENAPLGSSVMKVS 1057



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVN 83
            P+SL+      V + D+N+N    P + P  ++ G  +        ++K+ A D D+G +
Sbjct: 1009 PISLSSTCYVEVEVIDVNENLH--PPVFPSFVEKGAVKENAPLGSSVMKVSARDEDMGRD 1066

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
             EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV A+D G     + VE
Sbjct: 1067 GEIHYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVYASDQGVVPLSSFVE 1124

Query: 142  VSVV------PGPNTRSPVF 155
            V +         P T  PV+
Sbjct: 1125 VYIEVEDVNDNAPQTSEPVY 1144



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++++N+ DINDNAP         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I Y+I    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYAIID-GNQG-SPFTIDPARGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G     T   V++ V   N  +PVF +  Y + + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRGNYSLIIQENKPVGFSVLQLVVT 3465



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I+ ++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGF--FSINSKTGLITTTARKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKLTITRVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            F+F V+AR   G     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2774 FQFSVLARCTHGDYELVASVDVSIQVK--DTNDNSPVLESSPYEAFIVENLPAGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ Y++    +   +  F ++  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDLDSGSNGQVMYNLDQSQSVDVIESFAVNMETGWITTLRELDHEKRDSYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G K   SS  IV+V+V    N   P F    Y   VSE       +A ++ +
Sbjct: 2892 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPPGGVIAIVSTT 2943



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  + YSI     
Sbjct: 808 LEIRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVRYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF ID  +GV++    L   EQ  + + V+A D   +  Q     I++VS +   N
Sbjct: 863 TDTDKFSIDSVTGVVKILNPLDREEQQVHYLKVEARDQAREEPQLLSTVILKVS-LDDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQ 127
            +  + A D D     ++ YSI  +S      F ID ++G+I  +   +      YS+ V 
Sbjct: 2409 VTCVRAYDADSSDADKLEYSI--LSGNDHKNFVIDGKTGIITLSNLRRHALKPSYSLQVS 2466

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D   +SS   V V+V+ G N  SP+F QN Y+V ++E A +++ V  +  S   SG
Sbjct: 2467 ASDGVFRSSAQ-VHVTVIGG-NLHSPLFLQNEYEVELAENAPLHTLVTEVKASDGDSG 2522



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  IQ  E +     ++ + ATD D G N ++ Y++   +      
Sbjct: 707 HSVNAHAPQFRSTLPAGIQVKENQPVGSSLLVMNATDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  +G+++    L     ++Y++ +  +D G   +++  ++E+ V+   N   P F 
Sbjct: 765 FIMDMETGMLKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 824 QESYFVEVSEDKEINSEI 841



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+ T V V ++   N   P+F Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPIYTLTIQGTNMAGLSTNTTVLVHLL-DENDNLPLFVQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 124 EKNTNAEARTQVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 183

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             YS    ++     F I P SG I  TG+L   E   Y + + A D G K
Sbjct: 184 FYYSFKDRTDM----FAIHPTSGTIVLTGRLDYTETSVYEMEILAVDRGMK 230



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1529 ILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 19/159 (11%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYATTLSEASVIGTSVVQVRATDADSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQT 138
             N  I+Y +    +     F +D  +G+I     L   +  Q+ I+V+A D G    S  
Sbjct: 2314 PNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDYEQFRQHQISVRAVDGGMPPLSSD 2373

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V    V   N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VVVTVDVTDLNDHPPLFDQQLYEARISEHAAHGHFVTCV 2412



 Score = 38.9 bits (89), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSTSLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               ++V + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1894 RGVKVVAVNATDADSSAFSQLMYSITE-GNIG-EKFLMDRKTGTITVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   ++++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFASFAAIKINVKESKESQLK-FTQDFYSAIVKENSTEARTLAVIT 2002



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++A+D D G+   +TY I  V++    +F  + R G I T  KL     A +   I 
Sbjct: 2511 VTEVKASDGDSGIYGHVTYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVIPIR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              A D GGK +   + V ++   N  +P F+   ++VN+   A   ++V  +  S    G
Sbjct: 2568 FMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKFEVNIGSSAPKGTSVIKVLASDADEG 2626


>gi|427791591|gb|JAA61247.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1124

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 22/187 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAPR  + P  Q   
Sbjct: 296 LAKELDYEDLRQPKSYSLIVTATEDSG-GFSTSVELTIKVTDVNDNAPRFEL-PDYQAHN 353

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+++ ATD D G NAE+TYS+          F ID R GV+ +  +L
Sbjct: 354 VDEDIAVGTS---ILQVSATDMDTGRNAELTYSL------DKEDFTIDSR-GVVYSNRRL 403

Query: 117 IA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            A     Y +TV+ATD G         + +     N  +P F Q+ Y  NV E A  ++ 
Sbjct: 404 DADVNNTYVLTVRATDRGEPPLTGTATIRIYTENKNDEAPKFSQDVYTPNVDENAGPSTL 463

Query: 174 VATITVS 180
           V T+  S
Sbjct: 464 VTTVVAS 470



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 22/189 (11%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLT----VNLNDINDNAPRLP----MI 56
           +LD+D     K+   V AR+        A  P + T    V + D+NDN P         
Sbjct: 508 HLDKD-----KYELNVTARDDGACCRNGALTPHTSTALVVVFITDVNDNKPVFEECQTYT 562

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P ++ +  ++   ++K++A D D G N ++ YSI    N    KF +D  +G I T    
Sbjct: 563 PKVE-EGAQSGTSVIKVKARDLDKGHNGQVRYSIVQQPNQKGTKFSVDELTGEIRTNKVF 621

Query: 117 IA----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +   + 
Sbjct: 622 DREGDDGRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEYRENVKQDTQVG 681

Query: 172 STVATITVS 180
             +  ++ S
Sbjct: 682 IHILRVSAS 690


>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
 gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
          Length = 2943

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 1406 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPVFERYPY 1461

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 1462 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 1518

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV  FQ  TY V + E
Sbjct: 1519 QSLASESGKLLHLEVVARDKGTPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 1576



 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 11/166 (6%)

Query: 29  QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
           Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 319 QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 378

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
           + ++TYS+   S  GL  F ID RSG +  +  L   + +++++ V ATD G  S  T +
Sbjct: 379 SGQVTYSLVKDSGKGL--FAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNL 436

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + V V   N   PVF++  Y VNVSE  SIN+ +  +  S L +G
Sbjct: 437 TILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTG 482



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 19/184 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
           R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 417 RHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-EEYSVNVSESRSINAQIIQVN 475

Query: 75  ATDNDLGVNAEITYSIYH---------VSNTGL-HKFRIDPRSGVIETTGKLI--AGEQY 122
           A+D D G NA ITY I           +S++ + H F I P SG I     L   A ++Y
Sbjct: 476 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSHHFGIFPNSGWIYLRAPLDREARDRY 535

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
            +T+ ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S 
Sbjct: 536 QLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASD 595

Query: 182 LASG 185
           L  G
Sbjct: 596 LDLG 599



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAPR  +      +
Sbjct: 1303 LSARPLDRE--QNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1360

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +V+I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1361 QEDA-PLSTSVVQISAVDADLGVNARLVYSL---ANETQWQFAIDSQSGLITTVGKLDRE 1416

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V ATD G    +S+   V+++V+   + R PVF++  Y
Sbjct: 1417 LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNR-PVFERYPY 1461



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 4/114 (3%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSIT 125
           ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L   E+  Y + 
Sbjct: 676 EVVRVRAVDRDNGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLG 735

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           V A+D G    +T+  + V V   N   P F  ++    V E A++   V +I+
Sbjct: 736 VAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSIS 789



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI  V   
Sbjct: 2235 FRLELHDENDNEPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPVPSD 2294

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+D  SG++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2295 ESSWKMFRVDSESGLV-TSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVE-IESRDEF 2352

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2353 TPQFTERTY 2361



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P  R      + +        I  + A+D D G NA++ YSI    N
Sbjct: 1231 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1289

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID  SG  + + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1290 LG-NKFSIDSSSG--DLSARPLDREQNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1346

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F+ + Y  +V E A ++++V  I+
Sbjct: 1347 NAPRFKLSKYTGSVQEDAPLSTSVVQIS 1374



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 69/168 (41%), Gaps = 29/168 (17%)

Query: 38   SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            S+TV L   D NDNAP+             +      + GE    IV   A D D G N 
Sbjct: 984  SVTVRLQVLDANDNAPQFVSPNANGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1040

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---K 134
             +TY I      G  +FRI+ ++GVIE        T  +  G ++++ + A D G    K
Sbjct: 1041 RLTYEI--TGGNGEGRFRINSQTGVIELVKSLPPATEDVEKGGRFNLIITAKDHGQPEPK 1098

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             S   + + VV G +   P F Q  Y   + E     S V  +T   L
Sbjct: 1099 KSSLSLHL-VVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1145



 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 29/198 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEAT 76
            ++   VIA +    A +V   LTV +ND NDNAP  L   PP       A  +I +  + 
Sbjct: 1887 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSV 1943

Query: 77   DNDL-----------GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------AG 119
            D DL           G N+++ Y I          F + P +GV+      +      +G
Sbjct: 1944 DFDLLTVNATDADSEGNNSKVIYII----EPAQEGFGVHPSNGVVSVNMSRLQPAVSPSG 1999

Query: 120  EQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + Y + + A D G     S T++ V      + RS  F QN Y   +SE A + S V  +
Sbjct: 2000 D-YFVRIIAKDAGKPVLKSSTLLRVQASDNGSGRSQ-FLQNQYRAQISESAPLGSVVLQL 2057

Query: 178  TVSRLASGCAIMNKEENS 195
                L    AI+   E S
Sbjct: 2058 GQDALDQSLAIVAGNEES 2075



 Score = 42.4 bits (98), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
           LDR+  +  +++  ++A +    AA     + V + D NDN P+        +I+    R
Sbjct: 527 LDREARD--RYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 584

Query: 68  RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
             +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 585 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 640

Query: 125 TVQATDTG 132
            V+A D G
Sbjct: 641 VVEARDQG 648



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 16/141 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPI 59
           LVV++  LDR+  +  +FR ++ A +   T    S  +++ + + D+NDNAP  P   PI
Sbjct: 836 LVVARL-LDREVQS--EFRLEIRALDTTATNNPQSSAITVKIEVADVNDNAPEWPQ-DPI 891

Query: 60  QIQAGEAR---RQIVKIEATDNDLGVNAEITYSI---YHVSNTGLHK--FRIDPRSGVIE 111
            +Q  EA      I    ATD D G N ++ Y +   +   N    +  F +D  +G + 
Sbjct: 892 DLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMDSLTGALS 951

Query: 112 TTGKLI--AGEQYSITVQATD 130
               L   A ++Y + VQA D
Sbjct: 952 LQAPLDFEAVQEYLLIVQALD 972



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
           + A+D D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD
Sbjct: 49  VSASDPDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATD 107

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            GG S+  ++++ +    + R PVF    Y V++ E
Sbjct: 108 RGGLSTTAMIKMQLTDVNDNR-PVFYPREYKVSLRE 142



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 25/184 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 99  YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKAPSQASST--P 154

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +   +    + + 
Sbjct: 155 IVAVVATDPDYGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 212

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + ATD G   S    +V +S++     R P+F++  Y+  V E     + V ++     A
Sbjct: 213 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA---A 268

Query: 184 SGCA 187
           SG A
Sbjct: 269 SGDA 272



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 11/164 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P + R  ++AR       +    L + L D NDN+P+      +  +  G  +   V ++
Sbjct: 1684 PNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQV 1743

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + ATD
Sbjct: 1744 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 1801

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             G    +    + V +V   N   P F  N   V VSE   +++
Sbjct: 1802 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEANDVDT 1843


>gi|395743364|ref|XP_002822394.2| PREDICTED: protocadherin Fat 3 [Pongo abelii]
          Length = 4589

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFVTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3075 -EFFLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAEKLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGTPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     M   I + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAMFETILLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  +  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSELPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISE 1993



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDIYSAVISEDALVGDSV 3360



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  KL   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAEKLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FAVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFVINQFTGVISTTDELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTAQDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502



 Score = 39.7 bits (91), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 2489 ANLYSPTFSQSTYVAEVRENVAAGTKV 2515



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFVTVEYRASV 2609


>gi|427798031|gb|JAA64467.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 876

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 22/187 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAPR  + P  Q   
Sbjct: 159 LAKELDYEDLRQPKSYSLIVTATEDSG-GFSTSVELTIKVTDVNDNAPRFEL-PDYQAHN 216

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+++ ATD D G NAE+TYS+          F ID R GV+ +  +L
Sbjct: 217 VDEDIAVGTS---ILQVSATDMDTGRNAELTYSL------DKEDFTIDSR-GVVYSNRRL 266

Query: 117 IA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            A     Y +TV+ATD G         + +     N  +P F Q+ Y  NV E A  ++ 
Sbjct: 267 DADVNNTYVLTVRATDRGEPPLTGTATIRIYTENKNDEAPKFSQDVYTPNVDENAGPSTL 326

Query: 174 VATITVS 180
           V T+  S
Sbjct: 327 VTTVVAS 333



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 22/189 (11%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLT----VNLNDINDNAPRLP----MI 56
           +LD+D     K+   V AR+        A  P + T    V + D+NDN P         
Sbjct: 371 HLDKD-----KYELNVTARDDGACCRNGALTPHTSTALVVVFITDVNDNKPVFEECQTYT 425

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P ++ +  ++   ++K++A D D G N ++ YSI    N    KF +D  +G I T    
Sbjct: 426 PKVE-EGAQSGTSVIKVKARDLDKGHNGQVRYSIVQQPNQKGTKFSVDELTGEIRTNKVF 484

Query: 117 IA----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +   + 
Sbjct: 485 DREGDDGRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEYRENVKQDTQVG 544

Query: 172 STVATITVS 180
             +  ++ S
Sbjct: 545 IHILRVSAS 553


>gi|296485147|tpg|DAA27262.1| TPA: FAT tumor suppressor homolog 2 [Bos taurus]
          Length = 3159

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 1774 WRIFSRKTLDRE--HTAKYLLRITASDGK-FQASVPVEIFVL--DINDNSPQCSQL---- 1824

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 1825 LYTGKVSEDVPPEHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGDLTTLT 1881

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 1882 ALDREKKDVYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPRFFPSHSAVAVFDNTTVKT 1940

Query: 173  TVATI 177
             VA +
Sbjct: 1941 PVAVV 1945



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            K+   V    K  ++ S   ++ VN+ DIN++ PR P  +     ++       ++ + A
Sbjct: 2096 KYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVLENAIVGDVVLTVSA 2155

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  VN+ ITYS+  +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 2156 TDEDGPVNSAITYSL--IGGNQLGHFAIHPKKGELQ-VAKALDWEQTSSYSLKLRATDSG 2212

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +     ++++ V   N   P F Q  Y  +V E A I S V  + +S
Sbjct: 2213 QPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQENAPIGSKVLQLILS 2261



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 23/191 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           L+ +   LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1   LLATARQLDRE--NKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVR 58

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           LP     ++  G +   + ++ A+D D G+N  +TYSI      G   F IDP +GV+  
Sbjct: 59  LPE----RLNPGTSG-PVYRLVASDLDEGLNGRVTYSIEESDEAG---FSIDPVTGVVSA 110

Query: 113 TGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEGA 168
           +    AGE   +TV+ATD G    S+   + +  +P P   S P+ F ++ Y   V E  
Sbjct: 111 SSTFTAGEYNILTVKATDGGQPPLSASVRLHIEWIPKPRPSSIPLAFDESHYSFTVMETD 170

Query: 169 SINSTVATITV 179
            +N  V  I+V
Sbjct: 171 PVNHMVGVISV 181



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41  VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V++ D+NDN+P    +P    IQ G E    + ++ ATD DLGVN  +TY+         
Sbjct: 866 VSVEDVNDNSPEFKHLPYHTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAFAE----DY 921

Query: 99  HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
             FRIDP  G I         A  +Y + V A D G  S Q   EV V+   N  +P+FQ
Sbjct: 922 TYFRIDPYLGDISLRKPFDYQALNKYRLKVIAQDGGTPSLQAEEEVLVIVR-NKSNPLFQ 980

Query: 157 QNTYDVNVSEGASINSTV 174
              Y V V E  ++ + +
Sbjct: 981 TPYYKVRVPENITLYTPI 998



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 1883 LDRE----KKDVYSLVAKATDGGGQSCQADVTLHVEDVNDNAPRFFPSHSAVAVFDNTTV 1938

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI     L    Q    +
Sbjct: 1939 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLQVRPQAALEL 1995

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G     PVF    + V V E A   + V   AT+T
Sbjct: 1996 TVRASDLGTPIPLSTLGTVTVSVV-GLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLT 2054



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 16  PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVK 72
           P +    V+ R+++       V +++++ D N + PR   +   + +  +      ++++
Sbjct: 326 PSQHTLTVMVRDQEMPIKRNFVWVSIHVEDGNLHPPRFTQLH-YETRVSDTTVPGAELLQ 384

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
           + A D D G NAE+ YS    ++ G   F I+   G+I    KL       Y++TV+A D
Sbjct: 385 VRAMDGDRGANAEVHYSFLKGNSEGF--FNINALLGIITLAQKLDQANHARYTLTVKAED 442

Query: 131 TGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            G      +  V +   P ++ +P+F  + Y V + E   + S +  I+ +  +
Sbjct: 443 QGSPQGHDLATVIIHVYPSDSSAPIFSNSEYFVEIPESIPVGSPILLISATSFS 496



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 1345 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 1402

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++P +GV++    L+  E
Sbjct: 1403 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSVEDLEEEVIEVNPITGVVKVKESLVGLE 1462

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     +++ + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 1463 NRAFDLKIKAQDGGPPHWNSLMLLRLQVVPNEVSLPQFSEPLYTFSASEDLPEGSEIGSV 1522



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 1065 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGS 1124

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 1125 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 1183

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 1184 PPEFRQPHYEANVSELATCGHLVLKV 1209



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 1591 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDP 1650

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 1651 GSNIHELFAIDSETGWITTLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSIT-DE 1709

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 1710 NDNAPRFASEDYRGSVVENSEPGEPVATL 1738



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
           ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 274 ELLRVQATDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 331

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           TV   D      +  V VS+ V   N   P F Q  Y+  VS+
Sbjct: 332 TVMVRDQEMPIKRNFVWVSIHVEDGNLHPPRFTQLHYETRVSD 374



 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 84  AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVE 141
           +E+TY +   +  G+  F ++  SG+I T  KL   +   Y + ++ ++  G  +  +V 
Sbjct: 496 SEVTYELREGNKNGV--FSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGTFTDVMVL 553

Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
           V ++   N  +PVF ++T+   +SE A +NS +     + L    +  +KE NS
Sbjct: 554 VYII-DENDNAPVFSKSTFVGQISEAAPLNSMIMDENNNPLVIRASDSDKEANS 606



 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 1021 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 1079

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 1080 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 1110


>gi|449500407|ref|XP_002196414.2| PREDICTED: protocadherin-23 [Taeniopygia guttata]
          Length = 3244

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 14/185 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
           V ++  LDR+         +V+AR+      +    L+V + D NDN PR    +   ++
Sbjct: 514 VSTRARLDRE--RQAALELRVVARDGGVPPRAAACRLSVRVEDANDNEPRFARAVYRARL 571

Query: 62  QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA 118
               AR R++++++ATD D     EI YS+Y   N       F+IDP +G I  +  +  
Sbjct: 572 PEHAARGRRLLQVKATDADADQFGEIEYSLYDGFNFYEKSKAFQIDPHTGQIFVSQDIDR 631

Query: 119 GEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASIN 171
            E    Y + V+A D GG S Q  V +  +   N   PVF+Q+ Y  ++S     GA I 
Sbjct: 632 EEDQTTYDLLVKAKDGGGLSGQAFVRIE-IEDINDNQPVFEQDIYVTSISSHTQPGAEII 690

Query: 172 STVAT 176
           + VAT
Sbjct: 691 NVVAT 695



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ + + LDR+      +   VIA +    A S    LT+ + D+ND  PR  +    + 
Sbjct: 1539 LLTTAQFLDREVQE--CYSLTVIALDDGSPALSATQVLTIIVLDVNDETPRF-LKQLYET 1595

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               E R     ++++EA D D G+N+ + Y I  +   G  KF+++  SG + T   L  
Sbjct: 1596 AVHENRDPGEFVIRVEAVDRDAGLNSLLQYEI--LPGPGYEKFKMNSDSGELVTAASLDR 1653

Query: 119  GEQ--YSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVF 155
              Q  ++I V   D+G  S S T+  +  V   N  SP F
Sbjct: 1654 ETQEVFNIKVLVWDSGTPSLSSTVTVICTVLDENDHSPTF 1693



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEAT 76
           + ++ + K G   S    + + + DINDN P       I + +  +  Q    I+ + AT
Sbjct: 638 YDLLVKAKDGGGLSGQAFVRIEIEDINDNQPVFEQ--DIYVTSISSHTQPGAEIINVVAT 695

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           D D G+   +TY +  V       F +D  +G+I  T  L  +A     +T+ A D GG 
Sbjct: 696 DRDSGIFGIVTYEL--VPGEFSSFFTVDASTGIIYLTSALGHLAHSALFLTISARDGGGL 753

Query: 135 SSQTIVEVSVVPGPNTRSP-VFQQNTYDVNVSEGASINSTVATI 177
            S +   V+V       +P +F+++ Y  +V E A  +S + T+
Sbjct: 754 PSASNAAVTVNILKTVLAPAIFERSRYSFSVPEDAPEDSVIGTV 797



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 41  VNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGL 98
           +++ DINDN P  L     + I   +     V I  A D D G+N  I YSI   ++   
Sbjct: 866 ISVTDINDNPPVFLTKSDKVTISHTQLPGTAVYIAHAEDKDSGLNGAIKYSI---ASKQS 922

Query: 99  HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP--V 154
             F IDP  GV+  T  ++A +Q  Y++ + A D G     +++ ++V        P  V
Sbjct: 923 DAFSIDPSLGVVNLTRTVLAEKQQEYTLQIAAEDCGSPPLTSLLTLTVAIEEQEMGPTLV 982

Query: 155 FQQNTYDVNVSEGAS 169
           FQ   Y V VSE  S
Sbjct: 983 FQSLVYQVEVSEATS 997



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 12/157 (7%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG 64
            KE    D  +  K    V+A   + + +SV   +TV + D+NDNAP+         +  G
Sbjct: 2068 KEPKHLDYEDKFKIHLTVVA---ENSFSSVFCGVTVLIQDVNDNAPKFEQSYYKASVWEG 2124

Query: 65   EA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            ++ +  IV++ ATD D G+N E  YSI  VS      F ID   G++     L       
Sbjct: 2125 QSPKTDIVQVFATDLDSGLNGETEYSI--VSGNENATFLIDSVRGILAANTGLDYETTSS 2182

Query: 122  YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQ 156
            Y + VQA D G    S+  IV + V+   N   PV Q
Sbjct: 2183 YRLVVQAADKGNPRLSATAIVRIQVL-DVNDNVPVVQ 2218



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 17/153 (11%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            V++ D ND AP L + P +     E       +  + A D D G    +TYSI   S+  
Sbjct: 2631 VSVLDDNDYAP-LFLFPSLSCTVSENLPTFSFVCAVCALDFDKGSYGHLTYSIQ--SSCL 2687

Query: 98   LHK--------FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
             H+        F IDP +G I T        Q  Y + +QA D G   + T V+V  + G
Sbjct: 2688 AHREAAGDRDMFFIDPLTGDIHTKQMFDYESQNRYCLIIQAKDKGDSLTTTTVQVD-IEG 2746

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   PVF Q  Y  N+ E       +  +T S
Sbjct: 2747 RDEFDPVFTQEHYFFNLPEKNQAGQLIGRVTAS 2779



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 12/156 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            ++ + + D+NDN P         +   E+      I ++ A D D G NAEITY+I   +
Sbjct: 2522 TVLITVLDVNDNPPVFSS-SEYHVHVKESIPIGSHITEVSAKDCDAGTNAEITYAIISGN 2580

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG---GKSSQTIVEVSVVPGPN 149
            + G   F +D R+G +  T  L   +  ++++ +QATD G      +  +V VSV+   N
Sbjct: 2581 DRGY--FGLDGRTGSVNLTEMLDYEDTMKFTLVIQATDGGTDVKNMAFAVVLVSVL-DDN 2637

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +P+F   +    VSE     S V  +       G
Sbjct: 2638 DYAPLFLFPSLSCTVSENLPTFSFVCAVCALDFDKG 2673



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 10/164 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATD 77
            +R  V A +K     S    + + + D+NDN P +  +  +++        IV ++ A+D
Sbjct: 2183 YRLVVQAADKGNPRLSATAIVRIQVLDVNDNVPVVQPLGEVEVPENTLPGFIVTQVSASD 2242

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
             D        + IY   N+   KF I+  +GVI   G L   E   Y++ +  +D+    
Sbjct: 2243 ADSRPALHFGF-IY--DNSSEMKFAINQHTGVIIVVGPLDFEETAVYTLHIIVSDS---V 2296

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             QT  E+++ V   N   P+F Q+ Y VN+ E  S+++TV T++
Sbjct: 2297 HQTEAELTILVLDINDNPPMFTQDFYQVNLPEFISMDATVLTLS 2340



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 12/169 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+  +   +  +++A +      S    L + + D+ND  P  P  P  +    EA  
Sbjct: 412 LDRESRD--LYELRLVATDGGTPPLSAEEPLLLRVADLNDETPAFPQ-PHYRAAVSEAAS 468

Query: 69  ---QIVKIEATDNDL--GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
               ++++ A+D D     NAE+ Y++       L   RID RSG + T  +L    Q +
Sbjct: 469 PGTAVLRLSASDADEPGSPNAEVRYAL-EGDAAALALLRIDARSGAVSTRARLDRERQAA 527

Query: 124 ITVQ--ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
           + ++  A D G         +SV V   N   P F +  Y   + E A+
Sbjct: 528 LELRVVARDGGVPPRAAACRLSVRVEDANDNEPRFARAVYRARLPEHAA 576



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 18/185 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L++++ +LDR+  +   F   +   +    + S    L + + D ND++P   +    Q 
Sbjct: 1749 LLITR-SLDRE--DISNFTLVIECHDLGSPSKSSSAQLYLTVLDENDHSP---LFAKTQY 1802

Query: 62   QAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            Q       E    I+ + A+D D G+N E+ YS+  + +T    F ID  +G I TT  L
Sbjct: 1803 QISVTEDLEEGSAILDLSASDEDAGLNGEVMYSL--IDDT-YGAFAIDSVTGSIITTKAL 1859

Query: 117  I--AGEQYSITVQATD--TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                  QY+    A+D  T    S T+  V  V   N   PVF QN   V V    ++N 
Sbjct: 1860 DREIKSQYTFRAVASDCSTHFPKSTTVSVVVHVDDVNDNDPVFLQNPIRVFVPAETAVNE 1919

Query: 173  TVATI 177
            TVA++
Sbjct: 1920 TVASV 1924



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 12/143 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LT+ + DINDN P        Q+   E       ++ + A D D   N  I+Y I     
Sbjct: 2303 LTILVLDINDNPPMFTQ-DFYQVNLPEFISMDATVLTLSAIDRDSERNGMISYKIL---- 2357

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI---TVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            +    F ID ++G +  T  ++  +  SI    ++A D G      +  + V +   N  
Sbjct: 2358 SPYEGFSIDHKNGSLFATEPVMQLKNISIIRLLIEAIDGGSPPLSAVTSIEVHIEDVNNC 2417

Query: 152  SPVFQQNTYDVNVSEGASINSTV 174
            +P F +  Y+++VSE AS+  +V
Sbjct: 2418 APRFTKALYNLSVSEDASVGESV 2440



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 20/110 (18%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----------IVKIEATDNDLGVNAEI 86
           + ++V + D NDNAP            GE R +          + ++ ATD DLG N E+
Sbjct: 213 LRVSVRVLDENDNAPAF--------SRGEYRARLREDAPPGTAVCRLRATDPDLGANGEV 264

Query: 87  TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            Y+I    +     F ++ RSGV+     L   A   + + V+A D G +
Sbjct: 265 RYAINRRQSDPDGYFAVEERSGVLRLRRPLDREARALHRLVVEARDGGAQ 314



 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L +SKE    D      F  QVI ++      +  V L++++ D ND++P        I 
Sbjct: 1326 LYLSKE---LDYETDSHFLLQVIIKDYNDPPQNSTVFLSIDVEDKNDHSPHFQDDFVVIG 1382

Query: 61   IQAGEARRQIV-KIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            I+       +V    A D D G +N++I YS+  +SNTG + F I P  G + T   L
Sbjct: 1383 IEENVPIGTLVYTFNAKDGDGGFLNSKIEYSL-EISNTGENPFLIHPLYGTLTTASPL 1439


>gi|302564845|ref|NP_001180833.1| protocadherin beta-8 precursor [Macaca mulatta]
          Length = 801

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A ++     S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDREAE--AELRLTLTALDRGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G IE   +L   
Sbjct: 252 ISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  + + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGGFSGKCTILIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|351707763|gb|EHB10682.1| Protocadherin Fat 2 [Heterocephalus glaber]
          Length = 4349

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 20/152 (13%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +    SVPV ++V   D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRITASDGK-FQTSVPVEISVL--DVNDNSPQCTQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +     R        I+K+ ATD+D   NA+I YS++     G H+F++DP +G + T  
Sbjct: 3015 LYISRVREDVSPGAFILKVSATDSDADTNAQIMYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             L     + YS   +ATD GG+S Q  V V V
Sbjct: 3072 ALDRERKDMYSFVAKATDGGGRSCQADVTVHV 3103



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V + DINDNAP         RLP  P P+   A      + ++ A+D D G+N  ITY
Sbjct: 1225 VVVCILDINDNAPVFSHKLFSVRLPERPSPVSPGA------VYRLVASDPDDGLNGSITY 1278

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV---- 144
            SI      G   F IDP +GV+ ++    AG+   +T++ATD+G     T V + V    
Sbjct: 1279 SIEESDEEG---FSIDPVTGVVSSSSTFTAGKYNILTIKATDSGQPPLSTSVRLHVEWIP 1335

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             P P++    F +  Y   V E   +N  V  ++V
Sbjct: 1336 QPRPSSIPLAFDEMPYSFTVMETDPVNHMVGVLSV 1370



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ DINDN P    +P   I Q G E    + ++ ATD DLG N  +TY+         
Sbjct: 2055 VSVEDINDNPPEFHHLPYYTIIQDGTEPGDVLFQVSATDKDLGANGTVTYAF----TEDY 2110

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G    QT  EV +V   N  +P+FQ
Sbjct: 2111 TYFRIDPYVGDISLKKPFDYQALNKYRLKVIARDGGTPPLQTEAEV-LVTVRNKSNPLFQ 2169

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2170 SPYYKVRVPENIALYTPI 2187



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            K+   +    K  ++ S   ++ VN+ D+N++ P+ P  +     ++       I+ + A
Sbjct: 3290 KYFLSIECSRKASSSLSDVTTVVVNITDVNEHRPQFPKDLYSTRVLENAIVGDVILTVTA 3349

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N+ ITYS+  V    L  F + P  G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3350 TDEDGPLNSAITYSL--VGGNQLGHFAVHPEKGALQ-VAKALDWEQTPSYSLKLRATDSG 3406

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                    +V V V   N   P F Q  Y   V E ++I S V  + +S
Sbjct: 3407 QPPLHADADVDVQVLDINDNPPRFFQLNYSTAVQENSAIGSKVLQLILS 3455



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 19/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEAR 67
            LDR+     K  +  +A+   G   S    +TV++ D+NDNAPR  P             
Sbjct: 3073 LDRE----RKDMYSFVAKATDGGGRSCQADVTVHVEDVNDNAPRFFPGFSRSHCTVAVFD 3128

Query: 68   RQIVK-----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GE 120
               VK     + A D D G NA++ YS+   +++   +F I P +GVI     L A  G 
Sbjct: 3129 NTTVKTPVAVVFARDPDQGANAQVAYSL---ADSAGGQFSIAPATGVIRLEKPLQARPGA 3185

Query: 121  QYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +TV+A+D G     S+   V VSVV G     PVF    + + V E A   + V ++
Sbjct: 3186 VLELTVRASDLGAPMPLSTLGTVAVSVV-GLEDYLPVFLAAEHGLQVREDAPPGAQVLSL 3244



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+ + D N + PR   +      P  I  G    ++
Sbjct: 1515 PSQHTLTVMVRDQEMPIKRNFVWVTIRVKDGNLHPPRFTQLHYEARVPDTIVPGS---EV 1571

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQA 128
            +++ A D D G NAE+ YS+   ++  L  F ID   G+I    KL      Q+++ V+A
Sbjct: 1572 LQVRAVDADRGANAEVHYSLLKGNSEDL--FNIDILQGIITVAQKLNQANHIQHTLIVKA 1629

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
             D G      +  V V   P+  S P+F    Y V V E   I S +  ++ +
Sbjct: 1630 EDQGSPRRHDLATVVVHVCPSDSSVPMFSSTEYFVEVPESIPIGSPIFLVSAT 1682



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 9/151 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 2781 VSVHIQVKDVNDNRPIFEADPYKAFLTENMPGGTTVIQVTANDEDTGNDGQVSYRLSMEQ 2840

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     +S+ +VEVSV+   
Sbjct: 2841 GSNVHELFAIDSETGWITTLKELDCETYQTYRFHVVAYDHGQTIQLASRALVEVSVI-DE 2899

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            N  +P F    Y  +V E +     VAT+ +
Sbjct: 2900 NDNAPQFVSEDYTGSVVENSEPGELVATLKI 2930



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 425 HYQLHVRTSPGLAST---TVLIDIVDCNNHAPIFHRSSYEGTVDENIPP--------GTS 473

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD DLG N  +TYSI   +      F IDP  GVI T+  +   +    Y+  V
Sbjct: 474 VLTVTATDWDLGENGYVTYSI---TGPKAVPFSIDPFLGVISTSKPMDYELMRRIYTFRV 530

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G   SQ   EVSV   +   N   P+F++     +V +   +  +V T +
Sbjct: 531 RASDWGAPFSQE-KEVSVSLRLKNLNDNWPMFEEVNCTTSVRQDWPVGKSVMTFS 584



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ ++  LDR+  +   +   V+A ++     S    + + + D+NDN PR+  P+  P 
Sbjct: 1085 MIQTQAALDRE--SIPYYWLTVLAVDRGSVPLSSVTEVYIEIMDVNDNPPRMSRPVFYPC 1142

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
              +       +++++A D D     ++T++I   ++ G+  F I P +G++ T  +L   
Sbjct: 1143 IREDAPLGTSVLQLDAWDPDSSSRGKLTFNITSGNHMGM--FVIHPVTGLLSTARQLDRE 1200

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + +++ + V   D G  S ++   V V +   N  +PVF    + V + E
Sbjct: 1201 SKDEHILEVTVLDNGEPSLKSTSRVVVCILDINDNAPVFSHKLFSVRLPE 1250



 Score = 42.7 bits (99), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            Q++++ A D+D G++ E+ Y +   + T L  F IDP +G+I+T   L       Y +TV
Sbjct: 1047 QVMQVTAHDDDSGLDGELQYFLR--AGTSLAAFSIDPDTGMIQTQAALDRESIPYYWLTV 1104

Query: 127  QATDTGGKSSQTIVEVSV 144
             A D G     ++ EV +
Sbjct: 1105 LAVDRGSVPLSSVTEVYI 1122



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 15/184 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
            + + + LDR+         +V+AR+  G  A   V +   L D NDNAP     R  +  
Sbjct: 2535 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCTVKII--LTDENDNAPQFKASRYTLSI 2592

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  +        ++++ A D D G NA++TYS+  +         ++  +GV++    L+
Sbjct: 2593 PSNVSKD---FPVIQVLAYDADEGQNADVTYSVDPMEELADELIDVNEITGVVKVKESLV 2649

Query: 118  AGEQYSI--TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
              E  ++   V+A D G     SQ  V++ VV       P F +  Y    SE   + S 
Sbjct: 2650 GLENKTLRFKVKAQDGGPPHWDSQVPVQLQVVSN-EVSLPKFSEPLYTFPASEDLPVGSE 2708

Query: 174  VATI 177
            +  +
Sbjct: 2709 IGVV 2712



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEV 142
            + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV
Sbjct: 2200 LIYNI--VEEESLMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV 2257

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +V   N   P F Q  Y  +VSEG   ++ V  +  S   SG
Sbjct: 2258 -LVEDVNDNPPTFSQLVYTTSVSEGLPAHTPVIQLLASDQDSG 2299



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I    + G    F++DP +G++ T GKL  G    Q+++
Sbjct: 1463 ELLRVQATDQDKGKG--LIYTIQGSQDPGSASLFQLDPSTGILVTVGKLDLGSGPSQHTL 1520

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+  V +
Sbjct: 1521 TVMVRDQEMPIKRNFVWVTIRVKDGNLHPPRFTQLHYEARVPD 1563



 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQ 127
           I K+ ATD DLG NA     +Y+  NT    F + P SGV+   GKL      +Y + V 
Sbjct: 167 ICKVTATDADLGQNA----GLYYTFNTRSKIFAVHPTSGVVTVAGKLNVTWRGKYELQVL 222

Query: 128 ATDTGGKSSQ 137
           A D   K S+
Sbjct: 223 AVDRMRKISE 232



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I +++  D D   N  + Y++  +
Sbjct: 803 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELKTKDADSEDNGRVRYTL--L 857

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 858 SPT--EKFSLHPLTGELVVTGPLDRESEPRYVLKVEARDQPKKGHQ 901



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 13/149 (8%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    +  G  A   ++++ A+D D G N +++Y I    +
Sbjct: 2254 TVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAHTPVIQLLASDQDSGQNRDVSYQIVEDGS 2313

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGP 148
                 F+I+  +G I T  +L   A + + + V+A D G     G++   +    V   P
Sbjct: 2314 DVSTFFQINGSTGEIFTLQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDVNDNP 2373

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
                P F+Q  Y+ +VSE A+    V  +
Sbjct: 2374 ----PEFRQPQYEASVSELATCGHLVLKV 2398


>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
 gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
          Length = 1812

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 9/185 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + V+++D+NDNAP +  P    + 
Sbjct: 1198 ISTREPLDRELR--ALYDLVVEARDQGTPVRSARVPVRVHVSDVNDNAPEIADPQEDVVS 1255

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V+I ATD D G NA ITYSI    ++  H  F IDP +GVI T   L  
Sbjct: 1256 VREEQPPGTEVVRIRATDRDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVLLDH 1315

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V ATD G    +T+  + V V   N   P F  ++    V E A +   V 
Sbjct: 1316 EERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAHVGHVVG 1375

Query: 176  TITVS 180
            +IT S
Sbjct: 1376 SITPS 1380



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 443 YLVIVNLPLDRE--STSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQELYHA 500

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ ++Y++     T    F+IDP++G+I T   +  
Sbjct: 501 NVMEVADPGTSVLQVLAHDRDEGLNSVLSYALAETPETHAQWFQIDPQTGLITTRSHIDC 560

Query: 119 GEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +    +TV A D GG+   S T   +  +   N   P+F Q+ Y+V+V+E   +   +
Sbjct: 561 ETEPVPQLTVIARD-GGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCI 619

Query: 175 ATITVSRLASGCAIM 189
             ++ S    G   M
Sbjct: 620 LKVSASDPDCGVNAM 634



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 13/166 (7%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGV 82
            Q TA   PV     + + + D+NDNAP     +  I + +  +    +    A D D G 
Sbjct: 892  QATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKDSGS 951

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + ++TYS+          F IDPRSG +  +  L     +++++ V ATD G     T +
Sbjct: 952  SGQVTYSLARERQL----FAIDPRSGHLVLSQHLDYETSQRHTLVVTATDGGVPPLATNL 1007

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF+++ Y VNVSE   +NS +  +  + L +G
Sbjct: 1008 TILVDVQDVNDNPPVFERDEYAVNVSESRPVNSQIVQVNATDLDTG 1053



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  VIAR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 567 QLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 626

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y++       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 627 PDCGVNAMVNYTLGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 685

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +  ++++ +    + R PVF    Y+V++ E     +  A+I V
Sbjct: 686 TTAMIKMQLTDVNDNR-PVFYPREYNVSLKESPPAQTPAASIPV 728



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   PP Q  A  A   
Sbjct: 672 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYNVSLKESPPAQTPA--ASIP 727

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQ--YSIT 125
           +V + ATD D G   +++Y I   +  G+  FRID  SG I  T    L    Q  + + 
Sbjct: 728 VVAVVATDPDSGSFGQVSYRIVAGNEAGI--FRIDRSSGEIFVTRPDSLSVRTQPTHMLN 785

Query: 126 VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           + ATD GG       +V +S++     R P+F++  Y+  V E    G  + S +AT
Sbjct: 786 ISATDGGGLRTGHDAVVFLSIIDALQ-RPPIFEKARYNYYVKEDIPQGTVVGSVIAT 841



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 22/169 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
            +++ V++ D+NDN P         +   E+R    QIV++ ATD D G NA ITY I   
Sbjct: 1007 LTILVDVQDVNDNPPVFER-DEYAVNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDA 1065

Query: 94   --------------SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
                          S+  LH F I P SG I     L     ++Y + + ATD G  ++ 
Sbjct: 1066 GADNATAPAAAGGSSDVALH-FGIFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAH 1124

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                V V V   N   P F +  Y+  + E     S V  +    L  G
Sbjct: 1125 ARTRVLVRVLDANDNDPRFLRPQYEFRIEENLRRGSVVGAVAARDLDLG 1173



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 31/201 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIP 57
            LVV++  LDR+  +  +FR ++  R    TA++ P    V++ + + D+NDNAP  P   
Sbjct: 1430 LVVARL-LDREVQS--EFRLEI--RALDTTASNNPQSSAVTVKIEVADVNDNAPHWPR-D 1483

Query: 58   PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI---YHVSNTGLHK----FRIDPRS 107
            P++++  EA      +    ATD D G N E+ Y +   + + N    +    F +D  +
Sbjct: 1484 PVELRLSEATAVGAVVHNFTATDADTGTNGELQYRLLRYFPLLNETQEQATPVFAVDSLT 1543

Query: 108  GVIETTGKLI--AGEQYSITVQATDTGGKSSQTI-----VEVSVVP----GPNTRSPVFQ 156
            G +     L   A ++Y++ VQA D    +S+ +     V + V+      P   SP+ +
Sbjct: 1544 GSLSLQAPLDFEAVQEYTLIVQALDQSSNASERLQTSVTVRLRVLDANDNAPEFVSPLAK 1603

Query: 157  QNTYDVNVSEGASINSTVATI 177
              +  V +S+   I  TVA +
Sbjct: 1604 GGSASVFLSDATRIGETVAHV 1624



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 14/143 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  +++  ++A +    AA     + V + D NDN PR  + P  + +  E  R
Sbjct: 1101 LDRETRD--RYQLVILATDNGTPAAHARTRVLVRVLDANDNDPRF-LRPQYEFRIEENLR 1157

Query: 69   Q---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
            +   +  + A D DLG NA I YS+   +++    F++ P +G I T   L    +  Y 
Sbjct: 1158 RGSVVGAVAARDLDLGENAAIRYSLLPANSS----FQVHPVTGEISTREPLDRELRALYD 1213

Query: 124  ITVQATDTGG--KSSQTIVEVSV 144
            + V+A D G   +S++  V V V
Sbjct: 1214 LVVEARDQGTPVRSARVPVRVHV 1236



 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 259 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDAEENGLVEYAIN 315

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDP++G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 316 RRQSDKEQMFRIDPQTGAIFINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 375

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 376 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 410


>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
          Length = 4347

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2962 WRIFSRKTLDRE--HTAKYLLRITASDGK-FQASVPVEIFVL--DINDNSPQCSQL---- 3012

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3013 LYTGKVSEDVPPEHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGDLTTLT 3069

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3070 ALDREKKDVYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPRFFPSHSAVAVFDNTTVKT 3128

Query: 173  TVATI 177
             VA +
Sbjct: 3129 PVAVV 3133



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            K+   V    K  ++ S   ++ VN+ DIN++ PR P  +     ++       ++ + A
Sbjct: 3284 KYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVLENAIVGDVVLTVSA 3343

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  VN+ ITYS+  +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3344 TDEDGPVNSAITYSL--IGGNQLGHFAIHPKKGELQ-VAKALDWEQTSSYSLKLRATDSG 3400

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +     ++++ V   N   P F Q  Y  +V E A I S V  + +S
Sbjct: 3401 QPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQENAPIGSKVLQLILS 3449



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 23/191 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ +   LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1189 LLATARQLDRE--NKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVR 1246

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            LP     ++  G +   + ++ A+D D G+N  +TYSI      G   F IDP +GV+  
Sbjct: 1247 LPE----RLNPGTSG-PVYRLVASDLDEGLNGRVTYSIEESDEAG---FSIDPVTGVVSA 1298

Query: 113  TGKLIAGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            +    AGE   +TV+ATD G      S +  +E    P P++    F ++ Y   V E  
Sbjct: 1299 SSTFTAGEYNILTVKATDGGQPPLLASVRLHIEWIPKPRPSSIPLAFDESHYSFTVMETD 1358

Query: 169  SINSTVATITV 179
             +N  V  I+V
Sbjct: 1359 PVNHMVGVISV 1369



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN+P    +P    IQ G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2054 VSVEDVNDNSPEFKHLPYHTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF----AEDY 2109

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q   EV V+   N  +P+FQ
Sbjct: 2110 TYFRIDPYLGDISLRKPFDYQALNKYRLKVIAQDGGTPSLQAEEEVLVIVR-NKSNPLFQ 2168

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2169 TPYYKVRVPENITLYTPI 2186



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 3071 LDRE----KKDVYSLVAKATDGGGQSCQADVTLHVEDVNDNAPRFFPSHSAVAVFDNTTV 3126

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI     L    Q    +
Sbjct: 3127 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLQVRPQAALEL 3183

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G     PVF    + V V E A   + V   AT+T
Sbjct: 3184 TVRASDLGTPIPLSTLGTVTVSVV-GLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLT 3242



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1462 ELLRVQATDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1519

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D G    +  V VS+ V   N   P F Q  Y+  VS+
Sbjct: 1520 TVMVRDQGMPIKRNFVWVSIHVEDGNLHPPRFTQLHYETRVSD 1562



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 5/118 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ A D D G NAE+ YS    ++ G   F I+   G+I    KL       Y++TV
Sbjct: 1569 ELLQVRAMDGDRGANAEVHYSFLKGNSEGF--FNINALLGIITLAQKLDQANHARYTLTV 1626

Query: 127  QATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            +A D G      +  V +   P ++ +P+F  + Y V + E   + S +  I+ +  +
Sbjct: 1627 KAEDQGSPQGHDLATVIIHVYPSDSSAPIFSSSEYFVEIPESIPVGSPILLISATSFS 1684



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2533 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2590

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++P +GV++    L+  E
Sbjct: 2591 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSVEDLEEEVIEVNPITGVVKVKESLVGLE 2650

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     +++ + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2651 NRAFDLKIKAQDGGPPHWNSLMLLRLQVVPNEVSLPQFSEPLYTFSASEDLPEGSEIGSV 2710



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2253 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGS 2312

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2313 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2371

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2372 PPEFRQPQYEANVSELATCGHLVLKV 2397



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2779 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVGP 2838

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2839 GSNIHELFAIDSETGWITTLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSIT-DE 2897

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2898 NDNAPRFASEDYRGSVVENSEPGEPVATL 2926



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
           ++Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 424 QYQLRIRTSPGLAST---TVVIDIMDCNNHAPVFNRSSYDGTFDENIPP--------GTS 472

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI H +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 473 VLTVTATDQDHGENGYITYSITHPNAV---PFSIDPYLGIISTSKPMDYELMNRIYTFRV 529

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++     ++ E   +  +V T++
Sbjct: 530 RASDWGSPFRQE-KEVSVSLRLKNLNDNKPMFEEVNCTGSIHEDWPVGKSVMTVS 583



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           I K+ ATD DLG NAE  Y+     NT    F I P SGV+   GKL
Sbjct: 163 ICKVSATDADLGQNAEFYYAF----NTRSEMFAIHPTSGVVTLAGKL 205



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN P++  P+  P   +       +++++A 
Sbjct: 1099 YWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYPTVREDAPLHTSVLQLDAW 1158

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   ++ G   F + P +G++ T  +L     +++ + V   D G  
Sbjct: 1159 DLDSSSKGKLTFNITSGNHMGF--FVLHPLTGLLATARQLDRENKDEHILEVTVLDNGEP 1216

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            S ++   V V +   N   PVF    ++V + E
Sbjct: 1217 SLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPE 1249



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +  +EATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 730 LAHLEATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATSFYVLNVT 787

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y V +SE   + +TVA +
Sbjct: 788 VYDLGTPQKSSWKLLTVNVEDW-NDNAPRFPPGGYQVTISEDTEVGTTVAEL 838



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 31/188 (16%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP-------RLPM--- 55
            +LDR+  +  ++  +V AR+  ++G        L + L D+NDN+P       RL +   
Sbjct: 876  HLDRE--SEPRYILKVEARDQPRKGHQLFSVTDLIITLEDVNDNSPQCITEHHRLKVPED 933

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +PP  I        +  ++A+D DLG   E+ Y +   ++   H   ++P +G +    +
Sbjct: 934  LPPATI--------LTFLDASDPDLGPAGEVQYVLLDDAHGTFH---VNPMTGALSLEKE 982

Query: 116  LIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGAS 169
            L    +  Y++++ A+D+G    + +   VEV+V+    N   P F    +   V E + 
Sbjct: 983  LDFERRAGYNLSLWASDSGKPLARRTLCHVEVTVLDVNENLHPPRFASFVHQGQVQENSP 1042

Query: 170  INSTVATI 177
              ++V  +
Sbjct: 1043 SGTSVMVV 1050



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVE 141
            +E+TY +   +  G+  F ++  SG+I T  KL   +   Y + ++ ++  G  +  +V 
Sbjct: 1684 SEVTYELREGNKNGV--FSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGTFTDVMVL 1741

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            V ++   N  +PVF ++T+   +SE A +NS +     + L    +  +KE NS
Sbjct: 1742 VYII-DENDNAPVFSKSTFMGQISEAAPLNSMIMDENNNPLVIRASDSDKEANS 1794



 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2209 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2267

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2268 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2298



 Score = 38.5 bits (88), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    + +++A D D   N  + Y +  +
Sbjct: 802 LTVNVEDWNDNAPRF---PPGGYQVTISEDTEVGTTVAELKAKDVDSEDNGRVRYVL--L 856

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 857 SPT--EKFSLHPLTGEMVVTGHLDRESEPRYILKVEARDQPRKGHQ 900


>gi|426350395|ref|XP_004042761.1| PREDICTED: protocadherin alpha-2 [Gorilla gorilla gorilla]
          Length = 1443

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
            V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 872  VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 931

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 932  SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 991

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 992  NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 1026



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 17/175 (9%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNA 84
           E QGT     V L + + D+NDNAP     +  + +    A   +V  + A+D D GVN 
Sbjct: 221 ELQGT-----VELLITVLDVNDNAPLFDQAVYRVHLLETTANGTLVATLNASDADEGVNG 275

Query: 85  EITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVE 141
           E+ +S    +S     KF++D  SG I    KL   E   Y I V+A D G        +
Sbjct: 276 EVVFSFDSGISRDIQEKFKVDSSSGEIRLIDKLDYEETKSYEIQVKAVDKGSPPMSNHCK 335

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAIM 189
           V V V   N  +P     +  + + E A +++ +A ITVS   SG      C++M
Sbjct: 336 VLVKVLDVNDNAPELAVTSLYLPIREDAPLSTVIALITVSDHDSGANGQVICSLM 390



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
           +  QV A +K     S    + V + D+NDNAP L    +  PI+  A      I  I  
Sbjct: 316 YEIQVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELAVTSLYLPIREDA-PLSTVIALITV 374

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D+D G N ++  S+  HV    +  F+ +  S V+++     +   Y + V A D G  
Sbjct: 375 SDHDSGANGQVICSLMPHVPFKLVSTFK-NYYSLVLDSALDRESLSVYELVVTAQDGGSP 433

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 434 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 466



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 767 VEVKDINDNPPVFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 823

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I+    + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 824 FFLDIETNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 883

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 884 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 918



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 29/163 (17%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE-------------ATDNDLGVNAEIT 87
           V + DINDN       PP+       R QI+ I              A D D+G NA +T
Sbjct: 121 VKVKDINDN-------PPV----FRGREQIIFIPESRLLNSRFPIEGAADADIGANALLT 169

Query: 88  YSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS 143
           Y++       L     D   +S  +E    L   E  +  + + ATD G    Q  VE+ 
Sbjct: 170 YTLSPSDYFSLDVEASDELSKSLWLELRKSLDREETPELHLLLTATDGGKPELQGTVELL 229

Query: 144 V-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           + V   N  +P+F Q  Y V++ E  +  + VAT+  S    G
Sbjct: 230 ITVLDVNDNAPLFDQAVYRVHLLETTANGTLVATLNASDADEG 272


>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
          Length = 4347

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2962 WRIFSRKTLDRE--HTAKYLLRITASDGK-FQASVPVEIFVL--DINDNSPQCSQL---- 3012

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3013 LYTGKVSEDVPPEHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGDLTTLT 3069

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3070 ALDREKKDVYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPRFFPSHSAVAVFDNTTVKT 3128

Query: 173  TVATI 177
             VA +
Sbjct: 3129 PVAVV 3133



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            K+   V    K  ++ S   ++ VN+ DIN++ PR P  +     ++       ++ + A
Sbjct: 3284 KYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVLENAIVGDVVLTVSA 3343

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  VN+ ITYS+  +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3344 TDEDGPVNSAITYSL--IGGNQLGHFAIHPKKGELQ-VAKALDWEQTSSYSLKLRATDSG 3400

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +     ++++ V   N   P F Q  Y  +V E A I S V  + +S
Sbjct: 3401 QPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQENAPIGSKVLQLILS 3449



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 23/191 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ +   LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1189 LLATARQLDRE--NKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVR 1246

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            LP     ++  G +   + ++ A+D D G+N  +TYSI      G   F IDP +GV+  
Sbjct: 1247 LPE----RLNPGTSG-PVYRLVASDLDEGLNGRVTYSIEESDEAG---FSIDPVTGVVSA 1298

Query: 113  TGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEGA 168
            +    AGE   +TV+ATD G    S+   + +  +P P   S P+ F ++ Y   V E  
Sbjct: 1299 SSTFTAGEYNILTVKATDGGQPPLSASVRLHIEWIPKPRPSSIPLAFDESHYSFTVMETD 1358

Query: 169  SINSTVATITV 179
             +N  V  I+V
Sbjct: 1359 PVNHMVGVISV 1369



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN+P    +P    IQ G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2054 VSVEDVNDNSPEFKHLPYHTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF----AEDY 2109

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q   EV V+   N  +P+FQ
Sbjct: 2110 TYFRIDPYLGDISLRKPFDYQALNKYRLKVIAQDGGTPSLQAEEEVLVIVR-NKSNPLFQ 2168

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2169 TPYYKVRVPENITLYTPI 2186



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 3071 LDRE----KKDVYSLVAKATDGGGQSCQADVTLHVEDVNDNAPRFFPSHSAVAVFDNTTV 3126

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI     L    Q    +
Sbjct: 3127 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLQVRPQAALEL 3183

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G     PVF    + V V E A   + V   AT+T
Sbjct: 3184 TVRASDLGTPIPLSTLGTVTVSVV-GLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLT 3242



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVK 72
            P +    V+ R+++       V +++++ D N + PR   +   + +  +      ++++
Sbjct: 1514 PSQHTLTVMVRDQEMPIKRNFVWVSIHVEDGNLHPPRFTQLH-YETRVSDTTVPGAELLQ 1572

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            + A D D G NAE+ YS    ++ G   F I+   G+I    KL       Y++TV+A D
Sbjct: 1573 VRAMDGDRGANAEVHYSFLKGNSEGF--FNINALLGIITLAQKLDQANHARYTLTVKAED 1630

Query: 131  TGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
             G      +  V +   P ++ +P+F  + Y V + E   + S +  I+ +  +
Sbjct: 1631 QGSPQGHDLATVIIHVYPSDSSAPIFSNSEYFVEIPESIPVGSPILLISATSFS 1684



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2533 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2590

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++P +GV++    L+  E
Sbjct: 2591 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSVEDLEEEVIEVNPITGVVKVKESLVGLE 2650

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     +++ + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2651 NRAFDLKIKAQDGGPPHWNSLMLLRLQVVPNEVSLPQFSEPLYTFSASEDLPEGSEIGSV 2710



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2253 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGS 2312

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2313 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2371

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2372 PPEFRQPHYEANVSELATCGHLVLKV 2397



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2779 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDP 2838

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2839 GSNIHELFAIDSETGWITTLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSIT-DE 2897

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2898 NDNAPRFASEDYRGSVVENSEPGEPVATL 2926



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1462 ELLRVQATDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1519

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V VS+ V   N   P F Q  Y+  VS+
Sbjct: 1520 TVMVRDQEMPIKRNFVWVSIHVEDGNLHPPRFTQLHYETRVSD 1562



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
           ++Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 424 QYQLRIRTSPGLAST---TVVIDIMDCNNHAPVFNRSSYDGTFDENIPP--------GTS 472

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 473 VLTVTATDQDHGENGYITYSI---TRPNAVPFSIDPYLGIISTSKPMDYELMNRIYTFRV 529

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++     ++ E   +  +V T++
Sbjct: 530 RASDWGSPFRQE-KEVSVSLRLKNLNDNKPMFEEVNCTGSIHEDWPVGKSVMTVS 583



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           I K+ ATD DLG NAE  Y+     NT    F I P SGV+   GKL
Sbjct: 163 ICKVSATDADLGQNAEFYYAF----NTRSEMFAIHPTSGVVTLAGKL 205



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN P++  P+  P   +       +++++A 
Sbjct: 1099 YWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYPTVREDAPLHTSVLQLDAW 1158

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   ++ G   F + P +G++ T  +L     +++ + V   D G  
Sbjct: 1159 DLDSSSKGKLTFNITSGNHMGF--FVLHPLTGLLATARQLDRENKDEHILEVTVLDNGEP 1216

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            S ++   V V +   N   PVF    ++V + E
Sbjct: 1217 SLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPE 1249



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 31/188 (16%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP-------RLPM--- 55
            +LDR+  +  ++  +V AR+  ++G        L + L D+NDN+P       RL +   
Sbjct: 876  HLDRE--SEPRYILKVEARDQPRKGHQLFSVTDLIITLEDVNDNSPQCITEHRRLKVPED 933

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +PP  I        +  ++A+D DLG   E+ Y +   ++   H   ++P +G +    +
Sbjct: 934  LPPATI--------LTFLDASDPDLGPAGEVQYVLLDDAHGTFH---VNPMTGALSLEKE 982

Query: 116  LIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGAS 169
            L    +  Y++++ A+D+G    + +   VEV+V+    N   P F    +   V E + 
Sbjct: 983  LDFERRAGYNLSLWASDSGKPLARRTLCHVEVTVLDVNENLHPPRFASFVHQGQVQENSP 1042

Query: 170  INSTVATI 177
              ++V  +
Sbjct: 1043 SGTSVMVV 1050



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVE 141
            +E+TY +   +  G+  F ++  SG+I T  KL   +   Y + ++ ++  G  +  +V 
Sbjct: 1684 SEVTYELREGNKNGV--FSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGTFTDVMVL 1741

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            V ++   N  +PVF ++T+   +SE A +NS +     + L    +  +KE NS
Sbjct: 1742 VYII-DENDNAPVFSKSTFVGQISEAAPLNSMIMDENNNPLVIRASDSDKEANS 1794



 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2209 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2267

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2268 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2298



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    + +++A D D   N  + Y +  +
Sbjct: 802 LTVNVEDWNDNAPRF---PPGGYQVTISEDTEVGTTVAELKAKDVDSEDNGRVRYVL--L 856

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 857 SPT--EKFSLHPLTGEMVVTGHLDRESEPRYILKVEARDQPRKGHQ 900



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +  + ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 730 LAHLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATSFYVLNVT 787

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y V +SE   + +TVA +
Sbjct: 788 VYDLGTPQKSSWKLLTVNVEDW-NDNAPRFPPGGYQVTISEDTEVGTTVAEL 838


>gi|71725377|ref|NP_001025159.1| protocadherin Fat 2 precursor [Mus musculus]
 gi|81888837|sp|Q5F226.1|FAT2_MOUSE RecName: Full=Protocadherin Fat 2; AltName: Full=FAT tumor suppressor
            homolog 2; Flags: Precursor
 gi|148701548|gb|EDL33495.1| mCG1445 [Mus musculus]
          Length = 4351

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2966 WRITSRKTLDRE--HIAKYLLRITASDGK-FQASVPVEVFVL--DINDNSPQCSQL---- 3016

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+ R        I+K+ A D D+  NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3017 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLH---GPGAQEFKLDPHTGELTTLS 3073

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  Y++  +ATD GG+S Q  V +  +   N  +P F  +   V V +  ++ +
Sbjct: 3074 VLDRERKDVYNLVAKATDGGGQSCQAEVTLH-IEDVNDNAPRFFPSHCAVAVFDNTTVKT 3132

Query: 173  TVATI 177
             VA +
Sbjct: 3133 PVAVV 3137



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ + + LDR+  N  ++  +V  ++           + V + D+NDN+P         +
Sbjct: 1193 LLSTAKQLDRE--NKDEYVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSH-KLFNV 1249

Query: 62   QAGE-----ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            +  E     +   + ++ A+D D G+N  ITYSI     +    FRIDP +GV+ ++   
Sbjct: 1250 RLSERLSPLSPEPVYRLVASDPDEGLNGSITYSI---EESDEESFRIDPVTGVVSSSSTF 1306

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSV--VPGPNTRS-PV-FQQNTYDVNVSEGASINS 172
             AGE   +T++ATD+G  +  T V + +  +P P   S P+ F ++ Y   V E   +N 
Sbjct: 1307 AAGEYNILTIKATDSGQPALSTSVRLHIEWIPQPRPSSIPLSFDESHYSFAVMETDPVNH 1366

Query: 173  TVATITV 179
             +  I+V
Sbjct: 1367 MLGVISV 1373



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P    IQ G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGTVTYGF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G    QT VEV V    N  +P+FQ
Sbjct: 2114 AYFRIDPYVGDISLKKPFDYQALNKYHLRVTARDAGTPPLQTEVEVHVTVR-NKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVKVPENITLYTPI 2190



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 14/168 (8%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            + ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3083 YNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3142

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGGK-- 134
            D GVNA++ YS+   +++   +F ID  SGVI  E   ++ +     +TV+A+D G    
Sbjct: 3143 DQGVNAQVVYSL---TDSADGQFSIDATSGVIRLEKPLQVRSSSAVELTVRASDLGTPIP 3199

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
             S+   V VS+V G     P+F  + +   V E A I+  V   AT+T
Sbjct: 3200 LSTLGTVTVSIV-GLEDYLPIFLNSEHSTQVPEDALIDMEVLYLATLT 3246



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 9/171 (5%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVK 72
            P +    V+ R+++       V +T+++ D N ++P     P  +    +      ++++
Sbjct: 1518 PSQHILTVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQ-PRYEANVPDTTTPGTELLQ 1576

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATD 130
            + A D D G NAE+ YS    ++ G   F ID   G+I    +L  +   ++++TV+A D
Sbjct: 1577 VRAVDADRGANAEVHYSFLKGNSEGF--FNIDSLLGIITVAQRLDHVHLNRHALTVKAED 1634

Query: 131  TGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G      +  V V   P ++ +P+F ++ Y + + E   I S +  I+ +
Sbjct: 1635 QGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPESVPIGSPILLISAA 1685



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ D+N++ PR    +     ++       I+ + A+D+D  VN+ ITYS+  V  
Sbjct: 3308 TIVINVTDVNEHHPRFTHDLYTVRVLENAIVGDVILTVSASDDDGPVNSVITYSL--VGG 3365

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F IDP+ G ++   K +  EQ   YS+ ++ATD+G        EV+V V   N  
Sbjct: 3366 NQLGHFTIDPKKGKLQ-VAKALDWEQTPSYSLRIRATDSGQPPLHEDTEVAVEVVDVNDN 3424

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITV 179
             P F Q  Y   V E + I   V  + +
Sbjct: 3425 PPRFFQLNYSTAVQENSPIGIKVLQLIL 3452



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             FR +V A ++     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2344 HFRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCGHLVLKVQA 2403

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
             D D+G  + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 2404 LDPDIGDTSRLEYLI--LSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASD--G 2459

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                T+         N  SP FQQN Y+  ++E A + + V
Sbjct: 2460 VFQATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +++AR+  G  A   V +   L D NDNAP+       + I
Sbjct: 2537 ITTLQKLDRENSTERVIAIKIMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  +R   I+++ A D D G NA++TYS+    +       ++P +GV++    L+  E
Sbjct: 2595 PSNVSRDSPIIQVLAYDADEGRNADVTYSVDSTEDLAEEIIEVNPTTGVVKVKESLVGLE 2654

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
              ++   ++A D G     ++V V +   PN    P F +  Y  + SE     S + ++
Sbjct: 2655 NKAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEIPLPKFSEPLYTFSASEDLPEGSEIGSV 2714



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 FRI+  +G + T  +L   A + + + V+ATD G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFRINGSTGEMFTIQELDYEAHQHFRVKVRATDRGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F++  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFREPQYEANVSELATCGHLVLKV 2401



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 2783 VSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 2842

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F +D  SG I T  +L    Q  Y   V A D G     SSQ +VEVS+    
Sbjct: 2843 GSNIHQLFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSIT-DE 2901

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P F    Y  +V E       VAT+
Sbjct: 2902 NDNPPRFASEDYRGSVVENNEPGELVATL 2930



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + DINDN P +  P+  P   +       ++++EA 
Sbjct: 1103 YWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTSVLQLEAW 1162

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T+++   S   +  F + P +G++ T  +L     ++Y + V   D G  
Sbjct: 1163 DPDFSSQGKLTFNL--TSGNHMGHFIVHPFTGLLSTAKQLDRENKDEYVLEVTVQDNGDP 1220

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
              ++   V V V   N  SP+F    ++V +SE  S
Sbjct: 1221 PLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLS 1256



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI   +      F IDP  GVI TT  +   +    Y+  V
Sbjct: 477 VLTVTATDQDHGDNGHITYSI---AGPKAVPFSIDPYLGVISTTKSMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++    V++ + A +  ++  ++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLKNLNDNQPMFEEVNCTVSLRQDAPVGKSIMAVS 587



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 32/187 (17%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGE 65
            RD P  G   F V               + V L DINDN P+       +  P  +  G 
Sbjct: 896  RDQPTKGHQLFSV-------------TDVIVTLEDINDNPPQCITEHSSLKVPEDMPLGT 942

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
                +  ++A+D DLG   E+ Y +   V  T    FR+DP +G +    +L    +  Y
Sbjct: 943  V---LTFLDASDPDLGPAGEVKYILVDDVHGT----FRVDPMTGALSLEKELDFERRAGY 995

Query: 123  SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +++  A+D+G    + +   VEV V+    N  SP F    Y   V E +   + V  +T
Sbjct: 996  NLSFWASDSGRPLARRTLCHVEVLVMDVNENLHSPHFSSFVYQGQVQENSPAGTQVMVVT 1055

Query: 179  VSRLASG 185
                 SG
Sbjct: 1056 AQDDDSG 1062



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKL---IAGEQYSI 124
            ++++++ATD D G    + Y+I+   + G  + F++DP SGV+ T G L       Q+ +
Sbjct: 1466 ELLRVQATDQDHGKG--LIYTIHSSRDPGSANLFQLDPSSGVLVTVGTLDLHSGPSQHIL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N  SP F Q  Y+ NV +
Sbjct: 1524 TVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQPRYEANVPD 1566



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG+   + V  +  S   SG
Sbjct: 2272 FSQLVYSTSVSEGSPAQTPVIQLLASDQDSG 2302



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  +    E R     I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRFTISEDRPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
                F I P SGV+   GKL      +Y + V A D   K S+
Sbjct: 189 ARSEVFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVDRMRKISE 232



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
            A  Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G++ET   L       Y 
Sbjct: 1047 AGTQVMVVTAQDDDSGLDGELQYFLR--AGTGLEAFSINQDTGMLETLAPLDREFTPYYW 1104

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +TV A D G      + EV + V   N   P   +  +  +V E A + ++V  +
Sbjct: 1105 LTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTSVLQL 1159


>gi|5832711|dbj|BAA84070.1| Flamingo 1 [Mus musculus]
          Length = 2920

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q 
Sbjct: 240 VVTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQ 292

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETT 113
           +  E+ R+       ++ + ATD D   NA I Y +     ++    F IDPRSGVI T 
Sbjct: 293 EYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTR 352

Query: 114 GKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y +TV+A+D G   G  S T +    V   N  +P F +  Y V V E  
Sbjct: 353 GPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDV 412

Query: 169 SINSTVATITVS 180
           +  + V  +T S
Sbjct: 413 TPGAPVLRVTAS 424



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFT-------- 833

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 834 SVLQILATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 892

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 893 YAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 947



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DIND  P + +  P Q    E+      ++ ++A D D G NA + YS+  V +
Sbjct: 491 VTVQVLDINDIRPPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAGVGH 550

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I    +L   E   YS  V+A D G  +      VSV +   N  +
Sbjct: 551 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 608

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F Q  Y V ++E A++ ++V T++
Sbjct: 609 PTFTQPEYTVRLNEDAAVGTSVVTVS 634



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 577 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 635

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D     ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 636 VDRH--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 686

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VN +E     +TV  I+ +   +G
Sbjct: 687 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDEDTG 743



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 699 IVVNVTDANTHRPVFQS-SHYTVNGNEDRPAGTTVVLISATDEDTGENARITYFM----E 753

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 754 DSIPQFRIDGDTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 812

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y   V E     ++V  I  +   SG
Sbjct: 813 APQFLRDSYQGTVYEDVPPFTSVLQILATDRDSG 846



 Score = 40.8 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S   
Sbjct: 387 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 443

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRS 152
             +F +D ++G ++    L     ++Y++ ++A D G     +   +V V V+   + R 
Sbjct: 444 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRP 503

Query: 153 PVFQQNTYDVNVSEGASINSTV 174
           P+F    +   V E   +   V
Sbjct: 504 PIFVSTPFQATVLESVPLGYLV 525



 Score = 36.6 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 9/141 (6%)

Query: 49  NAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFR 102
           N    P   P   QA     Q     +  + A D D G    + Y++  + ++   H F 
Sbjct: 174 NVNTAPQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFS 233

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           +DP +GV+ T  +L       +   V A D G      +  +++ V   N   PVF+Q  
Sbjct: 234 LDPITGVVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQE 293

Query: 160 YDVNVSEGASINSTVATITVS 180
           Y  ++ E   +   V T+  +
Sbjct: 294 YKESLRENLEVGYEVLTVRAT 314



 Score = 36.2 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D NDN P          
Sbjct: 873  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVF 930

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 931  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 988

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 989  DRPEYVLVIQATSAPLVSRATV 1010


>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
            [Harpegnathos saltator]
          Length = 3435

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 20/168 (11%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT   + V SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 1934 QGTPQLMGVASLIVNVQDINDNPPEFASKVYFARVPEIYAVGTE----VARVLATSKDTG 1989

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG--GKSS 136
            VNA+I YSI  V      KF+ID ++GV+ T  +L+  E+   Y +T+QA D G    S+
Sbjct: 1990 VNADIYYSI--VGGNEHKKFQIDAKTGVV-TIAELLDYERARDYFLTIQAVDGGIPPLSN 2046

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
               V ++V    N  +P+F + +Y   V E A I   VA +  + L S
Sbjct: 2047 HATVNITVTDS-NDNAPIFSEVSYRAAVREDAKIGEKVAQVYANDLDS 2093



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ 127
           + + ++ A D D+G N  I YSI   S  G  KF+I P +G++ +   L A ++Y + ++
Sbjct: 5   KPLFQVLAKDQDIGDNGRIQYSIK--SGRGKGKFKIHPTTGMVYSQRGLEADQEYEMLIR 62

Query: 128 ATDTG--GKSSQTIVEVSVV--PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ATD G   +S QT V V VV  P  +  SPVF+ N   V+V+E   +   VA +
Sbjct: 63  ATDHGEPQRSHQTRVSVQVVETPKKSEHSPVFKTNNQSVDVTESDEVGFLVALV 116



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 18/177 (10%)

Query: 20   RFQVIA--REKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVK 72
            R+ +IA  +++          L + ++D+NDNAPR  M       P  ++ G     + K
Sbjct: 1820 RYSLIAHVQDRDKPMWECSSQLEILISDLNDNAPRFTMQTYSSTLPEDVEVGTL---VTK 1876

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQAT 129
            + ATD+D+G+N +I Y     ++     F I   SG++ T GK +  E    Y++T+QA 
Sbjct: 1877 VHATDDDIGINRKIRYEFIDSADG---HFFIAADSGIV-TLGKPLDRETKAMYNVTIQAL 1932

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G      +  + V V   N   P F    Y   V E  ++ + VA +  +   +G
Sbjct: 1933 DQGTPQLMGVASLIVNVQDINDNPPEFASKVYFARVPEIYAVGTEVARVLATSKDTG 1989



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 11/158 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++++ + DND G+N ++
Sbjct: 1003 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISVSEAASFGTSVLRVSSRDNDTGINQKV 1059

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEV 142
             Y+I + +      F IDP  GVI     L     E +  TV A D G    SS   V V
Sbjct: 1060 RYAIQNDTENSTDLFHIDPDEGVIFLKRSLDHETRESHHFTVIAMDRGVPSLSSTAHVWV 1119

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            SV+   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 1120 SVI-DMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 1156



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 10/181 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +V+++ LDR+     ++   VIA +  G +  V V   V + D NDNAP   +      I
Sbjct: 1289 IVTRKKLDRE--QLKRYEIPVIATDGGGRSGFVMVR--VKVGDENDNAPVFLLREYKATI 1344

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAG 119
            Q+  +     +K+ A D D    A+I YSIY          F I+P +G +      +  
Sbjct: 1345 QSNLSLNTPFLKVRAQDADEDEAAKIVYSIYETQTAPARLLFGINPDTGALFLQKSALPW 1404

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   + + ++A D G  +    V +S+ + GP+   P+F++      +SE +SI + +  
Sbjct: 1405 ENQLFELFIRAEDKGTTTHHADVPLSIYIMGPHDIPPLFERKEDKFFISEASSIGTPITK 1464

Query: 177  I 177
            +
Sbjct: 1465 L 1465



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDND 79
            V+A        +    +++ + D ND+AP+     P  I   E   +   I+K+ A D D
Sbjct: 1513 VLAETDSSPPLTALAKISLQVLDENDHAPKFES-NPYAISLAENIEEGTSILKVIAHDKD 1571

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N E+ YS         + F +D  +G I T  +L   +Q  Y   V ATD G     
Sbjct: 1572 LGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVVATDNGNPKHF 1631

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                V V +   N  +P F  + Y+  V+E A
Sbjct: 1632 ARASVHVKLKDYNDNAPAFVDDRYEATVNEDA 1663



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 8/157 (5%)

Query: 27  EKQGTAASVPVS-LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
           + QGT A    + + V ++D ND+AP     +I     +       +V++ A D D G N
Sbjct: 272 KDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYETSPVGTAVVQVCAIDRDRGEN 331

Query: 84  AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVE 141
           A ITYSI    N G + F +DP  G I    +L  G   +Y + V+ATD G  +    V 
Sbjct: 332 ARITYSITS-GNVG-NVFAVDPDLGFIRVARELDLGVTSEYILLVKATDHGSPALSNTVP 389

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V V V   +   P F Q      + E   + + V  +
Sbjct: 390 VHVMVTMADNAPPRFVQKELSAEIYENQQLGTYVKHV 426



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 9/131 (6%)

Query: 47   NDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            N + P+ P  P +++   E +   R +  + A D D G    + Y+I  +S T    F I
Sbjct: 1226 NRHNPKFPN-PVVEVTVLENQLPGRLVTSVLAVDEDFGEYGTVMYAI--MSETMKEIFDI 1282

Query: 104  DPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            +  +G I T  KL   +  +Y I V ATD GG+S   +V V  V   N  +PVF    Y 
Sbjct: 1283 NKLTGEIVTRKKLDREQLKRYEIPVIATDGGGRSGFVMVRVK-VGDENDNAPVFLLREYK 1341

Query: 162  VNVSEGASINS 172
              +    S+N+
Sbjct: 1342 ATIQSNLSLNT 1352



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 12/123 (9%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQT 138
            ++ ++ YSI         +F +D  +GVI    +L     +QY +TV+ATD+  G  ++ 
Sbjct: 951  LSRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 1008

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC------AIMNKE 192
            +V + V+   N   P F Q++Y+++VSE AS  ++V  ++     +G       AI N  
Sbjct: 1009 LVSILVL-DVNDCPPEFTQDSYNISVSEAASFGTSVLRVSSRDNDTGINQKVRYAIQNDT 1067

Query: 193  ENS 195
            ENS
Sbjct: 1068 ENS 1070



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 16/156 (10%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVN 83
           REK   A    V + V + DINDN P    +P   + + +A++   I K+ A D D G N
Sbjct: 797 REKPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVDAQKGDVITKVHAVDMDSGDN 853

Query: 84  AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQTI--- 139
            E+ Y +          F++  ++G I     L     +Y +T+ A D GG +  +I   
Sbjct: 854 GEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITPCSIEVP 909

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           V V V+   +   PVF +  Y  +V E   ++S +A
Sbjct: 910 VNVKVI---DRSMPVFDKQFYTDSVLESIEVHSPLA 942



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F ++P +GVI    +L   +   Y+++V AT+  G S+   V V V+   N  +P F Q 
Sbjct: 447 FFVNPSTGVIVIKNQLDYEKTKFYNLSVSATNMAGASAVCNVIVHVL-DRNDNAPRFLQA 505

Query: 159 TYDVNVSEGASINSTVATITVSRL 182
            Y   +SEGASI S V T T + L
Sbjct: 506 LYSGGISEGASIGSLVLTNTSAPL 529



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 18/169 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGEARRQI 70
           F  +V    K   ++     + + + D+ND  P+          ++P  +  A      +
Sbjct: 582 FHVKVSDLGKPKLSSETTAKVMIAVTDVNDCPPKFSKTDYNVTLLLPTYKNVA------V 635

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
           +++ A D D      + Y I  +     H F ID +SG+I         + Y + V+ +D
Sbjct: 636 IRVNAADPDSSEGTALRYDI--IDGNKAHTFDIDAQSGIITVHNSERMKKSYLLHVRVSD 693

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            G  SS   V V V    N+   +FQ+N Y+  + E ++  +TV  + V
Sbjct: 694 -GKYSSVAQVNVMVEKSENS-GLIFQKNVYEGAILENSTKITTVMVVNV 740



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
             F VIA ++   + S    + V++ D+NDN P+   P       +  E  + +  + A+D
Sbjct: 1098 HFTVIAMDRGVPSLSSTAHVWVSVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASD 1157

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY--SITVQATDTGGKS 135
             D  V+ ++TY+I  V       + ID  SG+I        GEQ    + V  TD G  +
Sbjct: 1158 PDY-VDEKLTYTI--VGGNEQQTYNIDQSSGIISLINMQNFGEQKLSMLNVSVTD-GVYT 1213

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            S   V++ ++P  N  +P F     +V V E
Sbjct: 1214 SFARVKIEILPA-NRHNPKFPNPVVEVTVLE 1243



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 10/145 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        ++  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 1737 VTVQVLDVNDNPPYCLRYRYREVLSEGSHPGAYVLTVLATDYDDEPNAKLRFYLTGENND 1796

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS 152
               KF +D  +GV++T G+L    Q  YS+   VQ  D       + +E+ ++   N  +
Sbjct: 1797 ---KFSLDKETGVLKTVGQLDRETQARYSLIAHVQDRDKPMWECSSQLEI-LISDLNDNA 1852

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F   TY   + E   + + V  +
Sbjct: 1853 PRFTMQTYSSTLPEDVEVGTLVTKV 1877


>gi|22095553|sp|Q9R0M0.2|CELR2_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
           AltName: Full=Flamingo homolog; Flags: Precursor
          Length = 2920

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q 
Sbjct: 240 VVTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQ 292

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETT 113
           +  E+ R+       ++ + ATD D   NA I Y +     ++    F IDPRSGVI T 
Sbjct: 293 EYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTR 352

Query: 114 GKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y +TV+A+D G   G  S T +    V   N  +P F +  Y V V E  
Sbjct: 353 GPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDV 412

Query: 169 SINSTVATITVS 180
           +  + V  +T S
Sbjct: 413 TPGAPVLRVTAS 424



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFT-------- 833

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 834 SVLQILATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 892

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 893 YAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 947



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DIND  P + +  P Q    E+      ++ ++A D D G NA + YS+  V +
Sbjct: 491 VTVQVLDINDIRPPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAGVGH 550

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I    +L   E   YS  V+A D G  +      VSV +   N  +
Sbjct: 551 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 608

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F Q  Y V ++E A++ ++V T++
Sbjct: 609 PTFTQPEYTVRLNEDAAVGTSVVTVS 634



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 577 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 635

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D     ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 636 VDRH--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 686

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VN +E     +TV  I+ +   +G
Sbjct: 687 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDEDTG 743



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 699 IVVNVTDANTHRPVFQS-SHYTVNGNEDRPAGTTVVLISATDEDTGENARITYFM----E 753

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 754 DSIPQFRIDGDTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 812

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y   V E     ++V  I  +   SG
Sbjct: 813 APQFLRDSYQGTVYEDVPPFTSVLQILATDRDSG 846



 Score = 40.8 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S   
Sbjct: 387 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 443

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRS 152
             +F +D ++G ++    L     ++Y++ ++A D G     +   +V V V+   + R 
Sbjct: 444 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRP 503

Query: 153 PVFQQNTYDVNVSEGASINSTV 174
           P+F    +   V E   +   V
Sbjct: 504 PIFVSTPFQATVLESVPLGYLV 525



 Score = 36.6 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 9/141 (6%)

Query: 49  NAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFR 102
           N    P   P   QA     Q     +  + A D D G    + Y++  + ++   H F 
Sbjct: 174 NVNTAPQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFS 233

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           +DP +GV+ T  +L       +   V A D G      +  +++ V   N   PVF+Q  
Sbjct: 234 LDPITGVVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQE 293

Query: 160 YDVNVSEGASINSTVATITVS 180
           Y  ++ E   +   V T+  +
Sbjct: 294 YKESLRENLEVGYEVLTVRAT 314



 Score = 35.8 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D NDN P          
Sbjct: 873  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVF 930

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 931  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 988

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 989  DRPEYVLVIQATSAPLVSRATV 1010


>gi|405951091|gb|EKC19034.1| Cadherin-23 [Crassostrea gigas]
          Length = 1838

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPI 59
           + + E LDR+  +     + +    K G      V L V + D NDN P   R      +
Sbjct: 479 IYNTEALDREKIS----EYYITVEAKDGGGFRTTVELNVKVTDTNDNKPLFTREAYFASL 534

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-----G 114
           +  A    R++ K+EATD D G+N+++ YSI ++     + F ID  +GV+  +      
Sbjct: 535 KEGATSFVREL-KLEATDLDEGMNSQVLYSISNIQPPVTNTFTIDDATGVVGLSRPVDYE 593

Query: 115 KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
           +L +  Q  + VQ  D G  S  +++  +V V   N   PVF   TY VN+ E ASI S 
Sbjct: 594 QLTSSGQIMLGVQVCDRGLPSLCSVINATVEVEDENDNKPVFNHTTYQVNIYENASIGSL 653

Query: 174 VATITVSRL 182
              +    L
Sbjct: 654 AVKVDAYDL 662



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 14/175 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           L+    ++D D        F VIARE +     S  V + V++ D+NDN P+        
Sbjct: 372 LIRVNNSVDLDYEKSKTATFDVIARELRTNPKRSSSVKMMVHILDVNDNQPQFEN-TSYS 430

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            Q  E         +++ATD D GV  +ITYS+      G  +F I+  +G I  T  L 
Sbjct: 431 AQIAENSPTGTTFARLQATDLDSGVFGKITYSV----RGGNGRFGINDSTGDIYNTEALD 486

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             +  +Y ITV+A D GG   +T VE++V V   N   P+F +  Y  ++ EGA+
Sbjct: 487 REKISEYYITVEAKDGGG--FRTTVELNVKVTDTNDNKPLFTREAYFASLKEGAT 539



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 21   FQVIAREKQGTAASVPVS---LTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIV-KIEA 75
            F VIA +     +SV  S   ++V+L DINDN P+ LP      ++        V  I A
Sbjct: 937  FTVIATDSASPPSSVLTSTATVSVSLIDINDNTPQFLPHPTQYSVEENAPNGTFVGNITA 996

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD D G   EITYS+  V+N       ID ++G+I     L     E+Y + V ATD
Sbjct: 997  TDRDSGRFGEITYSL-QVTNDD-QSLTIDSKTGIISVLKPLDREMREEYILYVTATD 1051



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 29/193 (15%)

Query: 3   VVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ K+ LDRD  P+  K  F  +A  +  +A ++ V +T+ ++D+ND  P       + +
Sbjct: 33  IILKKQLDRDHEPSDRKLYFN-LADGEGSSANNLAVQVTLFISDVNDEVPEF-----VNL 86

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIET 112
           +  E+  +       ++++ A D D G+   ++Y +        + FRI+  +G  +I +
Sbjct: 87  RYKESIYENATVGTTVIRVSAQDPDNGLGGTVSYYMEAADELYKNAFRINSDTGDVIINS 146

Query: 113 TGKLIAGEQYSITVQATDTGGKSS-------QTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
           +        Y   ++A D  G  S        T+++V   P      P F    Y V V 
Sbjct: 147 SLDFERHNFYEFVIKAKDGFGNESINNADFVVTVLDVQDTP------PAFFNLPYSVVVG 200

Query: 166 EGASINSTVATIT 178
           E  ++   V  +T
Sbjct: 201 EDKAVGERVLQVT 213


>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
          Length = 4349

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 VYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCTVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + + + D+NDN P         RLP  + P+      +   + ++ A+D D G+N  +TY
Sbjct: 1228 VVIGILDVNDNPPVFSHKLFNVRLPERLSPV------SSGPVYRLVASDLDEGLNGRVTY 1281

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P
Sbjct: 1282 SIKESDEEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIP 1338

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1339 QPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1373



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  V  
Sbjct: 3306 TVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--VGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G   ++      A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDITLKKPFDYQALNKYRLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCTVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIS 3197

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+ + D N + P    +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIRVEDGNLHPPCFTQLHYEASVPDTIVPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ ATD D GVNAE+ YS+   +  G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRATDADRGVNAEVHYSLLKGNGEGF--FNINALLGIITLAQKLDRANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q +     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     V T+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGKLVVTL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPHYEANVSELATCGHLVLKV 2401



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP +GV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSTGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIRVEDGNLHPPCFTQLHYEASVPD 1566



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDTPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+ +  +       I+P +GV++    L+  E
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYSM-NPEDLVKDVIEINPVTGVVKVKDSLVGLE 2653

Query: 121  QYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
              ++   ++A D G     ++V V +   P   S P F +  Y  +  E     S +  +
Sbjct: 2654 NQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSALEDLPEGSEIGVV 2713



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R +VIAR+  G   S+     V +   N + P L   P  +++  E       I  T 
Sbjct: 2138 KYRLKVIARD--GGTPSLQSEEEVLVTVRNKSNP-LFQSPYYKVRVPENITLYTPILHTQ 2194

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GK 134
                    + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G 
Sbjct: 2195 ARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGS 2252

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S+  VEV +V   N   P F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2253 FSEATVEV-LVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSG 2302



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.9 bits (89), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 34/203 (16%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDV 162
              ++E          Y++++ A+D+G    + +   VEV V+    N   P F    Y  
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVIVLDVNENLHPPHFASFVYQG 1039

Query: 163  NVSEGASINSTVATITVSRLASG 185
             V E +   + V  +      SG
Sbjct: 1040 QVQENSPSGTQVMVVAAQDDDSG 1062



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FIIHPVTGLLSTARQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V + +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + IV + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIHQDWPVGKSIVTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  +S   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--ISGNELEYFDLNHFSGVISLKRSFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
          Length = 4349

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 VYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCTVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + + + D+NDN P         RLP  + P+      +   + ++ A+D D G+N  +TY
Sbjct: 1228 VVIGILDVNDNPPVFSHKLFNVRLPERLSPV------SSGPVYRLVASDLDEGLNGRVTY 1281

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P
Sbjct: 1282 SIKESDEEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIP 1338

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1339 QPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1373



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  V  
Sbjct: 3306 TVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--VGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G   ++      A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDITLKKPFDYQALNKYRLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCTVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIS 3197

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+ + D N + P    +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIRVEDGNLHPPCFTQLHYEASVPDTIVPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ ATD D GVNAE+ YS+   +  G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRATDADRGVNAEVHYSLLKGNGEGF--FNINALLGIITLAQKLDRANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q +     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     V T+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGKLVVTL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPHYEANVSELATCGHLVLKV 2401



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP +GV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSTGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIRVEDGNLHPPCFTQLHYEASVPD 1566



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+ +  +       I+P +GV++    L+  E
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYSM-NPEDLVKDVIEINPVTGVVKVKDSLVGLE 2653

Query: 121  QYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
              ++   ++A D G     ++V V +   P   S P F +  Y  +  E     S +  +
Sbjct: 2654 NQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSALEDLPEGSEIGVV 2713



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R +VIAR+  G   S+     V +   N + P L   P  +++  E       I  T 
Sbjct: 2138 KYRLKVIARD--GGTPSLQSEEEVLVTVRNKSNP-LFQSPYYKVRVPENITLYTPILHTQ 2194

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GK 134
                    + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G 
Sbjct: 2195 ARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGS 2252

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S+  VEV +V   N   P F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2253 FSEATVEV-LVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSG 2302



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.9 bits (89), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 34/203 (16%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDV 162
              ++E          Y++++ A+D+G    + +   VEV V+    N   P F    Y  
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVIVLDVNENLHPPHFASFVYQG 1039

Query: 163  NVSEGASINSTVATITVSRLASG 185
             V E +   + V  +      SG
Sbjct: 1040 QVQENSPSGTQVMVVAAQDDDSG 1062



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FIIHPVTGLLSTARQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V + +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + IV + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIHQDWPVGKSIVTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  +S   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--ISGNELEYFDLNHFSGVISLKRSFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|348520328|ref|XP_003447680.1| PREDICTED: protocadherin Fat 2-like [Oreochromis niloticus]
          Length = 4457

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 99/181 (54%), Gaps = 13/181 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI--PP 58
            + ++ KE+LDR+  +  ++  +V A + +  A   P+S+ V++ DINDN+P    +    
Sbjct: 2961 WGLIVKESLDREARD--RYALRVTATDGKFEA---PISVDVHVLDINDNSPLCEQLVYTE 3015

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            + ++   +   ++K+ A+D D+G N +I+Y+++        KF ++ R+G + T   L  
Sbjct: 3016 VVMENSPSSVFVLKVSASDPDVGTNGQISYTLH---GPDADKFHLEHRTGELFTLAVLDR 3072

Query: 119  GE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                ++++ V+ATD GG+S Q  + + +V   N   P F  + Y+V V +  ++ + VA 
Sbjct: 3073 ERNVEFNLVVKATDGGGRSCQADI-LLMVQDMNDNPPRFSSSHYEVTVFDNTTVRTPVAV 3131

Query: 177  I 177
            +
Sbjct: 3132 V 3132



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 29   QGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLG 81
            +G+    P+S    + +N+ D+NDN P          +  E     R ++K+ ATD D  
Sbjct: 3291 EGSRGKSPLSDITTVIINVTDVNDNPPVFGR-SDYSAEVSEDLTPGRLVMKVTATDEDGP 3349

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTI 139
            VN  + YSI  VS   L +F ID RSG I     L   E   YS+TVQA D G     + 
Sbjct: 3350 VNNLLRYSI--VSGDLLQQFSIDARSGDITVRTALDREEIPHYSLTVQAADEGSPPLSSA 3407

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            V V+V V   N   PVF Q  + + + EG ++ S++  + V
Sbjct: 3408 VLVAVTVTDVNDNPPVFSQVNHSLLLQEGEAVGSSILQLVV 3448



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 13/142 (9%)

Query: 9    LDR-DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQ 62
            LDR D P   +   +VI  +    A S   ++ + + D NDN P     R  +  P Q  
Sbjct: 1192 LDREDKP---EHSIEVIVSDNGSPALSSTATVVIQVLDANDNPPKFMEKRFDVKLPEQRH 1248

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
             G  ++++ +I A DND G+NA +TYS+    +    +F IDP +GV+ + G  + G   
Sbjct: 1249 DG-GKQEVCRILAQDNDEGLNAAVTYSLQENMD---EQFEIDPVTGVVTSHGDFLPGSYN 1304

Query: 123  SITVQATDTGGKSSQTIVEVSV 144
             +T++ATD G  S  +   +++
Sbjct: 1305 ILTIRATDQGSPSYSSTARLNI 1326



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 11/152 (7%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V+L V L DINDN PR  P +  I++ +       +V +++ D DLG    +TY++    
Sbjct: 902  VNLVVILQDINDNPPRFVPKVHKIKVPEDVPVGTLLVWVDSIDLDLGSGGLVTYNL---K 958

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GP 148
            NT    F +D  +G +    +L       Y++TV A D G     SS   VE+ V+    
Sbjct: 959  NTESGIFHLDSSTGALTLERELDFERWPSYNLTVWAVDHGLPRSLSSSCFVEIEVLDVNE 1018

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   PVF +  Y+  V E +++ ++V T+T S
Sbjct: 1019 NLHRPVFSEFVYEALVKEDSAVGTSVVTLTAS 1050



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P+   +P   +  +  E    + ++ A D DLG N  I Y++    + GL
Sbjct: 2048 VFIDDVNDNSPQFLNLPFSMMISEDAEPGDVLYQVTAIDRDLGENGAIVYTLEE--DYGL 2105

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G +     L   A  +Y +TV A D G  S  T+ ++S+    N  +PVFQ
Sbjct: 2106 --FRIDPDMGDVSLQRPLDFNALNKYILTVSAIDEGEPSHSTMAQLSIQVR-NRTNPVFQ 2162

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEE 193
               Y + V E     +T+  +          I N EE
Sbjct: 2163 TLLYPLKVPEDVPPFTTILHVQARNPEGYRLIYNLEE 2199



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V++ D ND++P   + P  ++       A  ++++++A D D+G NA I+YS+ H  N
Sbjct: 1531 VVVHVEDCNDHSPAF-LSPRYEVGVSNLAPAGTEVLRVKALDKDMGSNAHISYSL-HSGN 1588

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               + F IDP  G I  +  L    Q  + +TV+ATD G      +  V V V       
Sbjct: 1589 ID-NVFTIDPDLGSISVSKPLDLQPQDLFHLTVKATDQGFPQRSDLCSVHVHVRVSEQTP 1647

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F  + Y   +SE +++ + V T++ S  A+
Sbjct: 1648 PTFPSDEYLTEISELSAVGTPVVTVSASSPAA 1679



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 19/174 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           ++ F V+A    G A +    + V + D NDN+P+       Q    E       ++K+ 
Sbjct: 428 RYEFDVMA--NHGEAET---HIVVEITDENDNSPQFTQTS-YQATLDENSPVGSSVLKVA 481

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDT 131
           A+D D G N  +TY+I   +N+G   F IDP +G+I T+  L   +   +Y + V A+D+
Sbjct: 482 ASDKDKGKNGFVTYTI---ANSGPLPFTIDPFTGIISTSEHLDYELMKRRYHLRVWASDS 538

Query: 132 GGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           GG  SQ + E  V   +   N   P+F+Q   +V V     +   VA ++   L
Sbjct: 539 GGPFSQ-VSESPVTITLNNINDNIPLFEQVGCNVTVPLDLPVGHEVAQLSAIDL 591



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITY 88
            T A    S+ + + D+NDNAP    ++  + I  G      ++++ A+D D G N ++T+
Sbjct: 2240 TGAFSEASIEIEVEDVNDNAPVFSNLMHNVNIAEGLPVDTSVIELSASDKDSGRNKDLTF 2299

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSV 144
             +          F I+P++G+I T   L   + + +++ ++ATD G    SS+T V ++V
Sbjct: 2300 QMVKTHGDESDFFEINPQTGLIVTKQVLDYESRKHFNLKIKATDNGTIPLSSETFVTINV 2359

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
                N   P F  + Y   + E A     V  I  S   +G + +N
Sbjct: 2360 T-DVNDNPPDFDSSRYKATLDEMAKCGHIVIKIHASDPDTGDSDLN 2404



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 8/127 (6%)

Query: 45   DINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D+NDNAP L  PM      +  +    ++++ ATD D   + ++++ +  + +  LH F 
Sbjct: 1122 DVNDNAPELSQPMYFASVPENVDTVESVIQVSATDVDTSSDGKLSFQM--LESHRLH-FD 1178

Query: 103  IDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNT 159
            IDP++GVI T   L   +  ++SI V  +D G  + S T   V  V   N   P F +  
Sbjct: 1179 IDPKTGVISTVSALDREDKPEHSIEVIVSDNGSPALSSTATVVIQVLDANDNPPKFMEKR 1238

Query: 160  YDVNVSE 166
            +DV + E
Sbjct: 1239 FDVKLPE 1245



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 101  FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+  +G+I T G+L     + Y + V A+ T G  S+T+V + VV   N  +PVF+Q 
Sbjct: 1693 FYINSYTGLISTQGRLNYETCDSYKLRVTASTTAGAVSRTVVHIYVV-DENDNAPVFEQR 1751

Query: 159  TYDVNVSEGASINSTV 174
             Y   + E A INS V
Sbjct: 1752 EYQGQIGESAHINSMV 1767



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           IV+ +ATDND G N+++ Y+I   +  G   F ID  SG +     L   + E Y + + 
Sbjct: 727 IVQFKATDNDSGFNSKLVYAISSGNEDGC--FSIDTFSGDLRLVCPLDRESKEFYILNIT 784

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G    S+   + ++V+   N   PVF Q  Y ++V E   +NS + T   + L S
Sbjct: 785 VYDLGIPQTSAWKFIAINVM-DVNDNPPVFDQPRYVIHVPENKEVNSVIFTCRAADLDS 842



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 13/163 (7%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEA 75
            ++  VIA+    GT  +  VS+++ + D+NDN P     P     A    A   ++++ A
Sbjct: 2755 YQIDVIAQGNHNGTDVASLVSVSIQVQDVNDNQPVFDASPYRAFLAENMPAGTTVIQVTA 2814

Query: 76   TDNDLGVNAEITYSIYHV-SNTGL---HKFRIDPRSGVIETTGK--LIAGEQYSITVQAT 129
             D D   N  +TY++  +  +T L     F ID  SG I T  +        Y   V AT
Sbjct: 2815 NDPDTDTNGVVTYTLEPLPDDTALAITEVFSIDGESGWITTLRETDCEVTRVYRFNVVAT 2874

Query: 130  DTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            D GG    SS  +VEV +V   N   P F +  Y  +V E ++
Sbjct: 2875 DHGGNAKLSSSVLVEV-MVTDENDNPPKFTEEVYRGSVVENST 2916



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 22/141 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+V+ + LDR+ P+      +V+A++  G  A   V +   L D NDN P        Q 
Sbjct: 2528 LIVTTQPLDRENPSQRVIAIKVMAKDGGGKVAFCTVKII--LTDENDNVP--------QF 2577

Query: 62   QAGEARRQI----------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            +A E +  I          ++I A D D G NA++TY +            I+P +GV+ 
Sbjct: 2578 KASEYQVSIQSTVNKGSPVIQIMAYDADDGKNADVTYLVDEAEEVTEDIIEINPFTGVVS 2637

Query: 112  TTGKLIAGEQ--YSITVQATD 130
                L+  E   ++  V+A D
Sbjct: 2638 VKESLVGMENKIFNFKVKARD 2658



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            F ++ +   G   S    + + + D+NDN PR                R  +  + A D 
Sbjct: 3078 FNLVVKATDGGGRSCQADILLMVQDMNDNPPRFSSSHYEVTVFDNTTVRTPVAVVYAKDP 3137

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG-GKS 135
            D G+N+E+ YS+    + G   F +D  SG++     L       + + V+ATD G  + 
Sbjct: 3138 DTGINSEVKYSLLS-GDDGY--FSLDEFSGILRLERPLNPETPTTFELKVKATDRGLPRH 3194

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              ++  V+V V   +   PVF  + Y   + E +++ S V +++
Sbjct: 3195 LHSVATVTVDVVSLDDYQPVFLSSEYTAQLPESSAVGSEVLSVS 3238



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           +  + K+ ATD D+G NAE  YS      +  H F +DP +G +    +L     ++Y +
Sbjct: 167 KSSVTKVSATDADIGSNAEFYYSF----TSRAHPFVVDPFTGTVSLIKRLNHTHAQRYDL 222

Query: 125 TVQATDTGGKSS 136
           TV A D   K S
Sbjct: 223 TVLAEDRTKKMS 234



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVS 143
           +T+SI +  +T    F+I+P++G+I TTGK      ++Y   V A + G   +  +VE++
Sbjct: 393 VTFSIKNNPDTS--NFKINPKTGIIITTGKFDYERKDRYEFDVMA-NHGEAETHIVVEIT 449

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                N  SP F Q +Y   + E + + S+V  +  S    G
Sbjct: 450 ---DENDNSPQFTQTSYQATLDENSPVGSSVLKVAASDKDKG 488



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            +V + A+D DLG +  + Y I+    +GL  F ID  +GVI  T  L       Y ++V 
Sbjct: 1044 VVTLTASDKDLGRDGVVRYRIH--DGSGLGVFTIDEETGVIRMTEMLDRETAPHYWLSVY 1101

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            ATD G +   T   V + V   N  +P   Q  Y  +V E
Sbjct: 1102 ATDLGTEPLITWTHVFIEVLDVNDNAPELSQPMYFASVPE 1141



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 14/137 (10%)

Query: 42   NLNDINDNAPRLPMIPPI-QIQAGE---ARRQIVKIEATDNDLGVNAEITYSIY---HVS 94
            N++ +N N  R   + P+ +++  E     + I++I A D D   N+++ YSI+   H  
Sbjct: 1426 NMSVLNINEHRPIFLEPLYEVRVPEDTSPWKDILQISAKDRD--NNSKLVYSIHSSLHPD 1483

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            +T L  F +DP+SGV+  T +L   +   +++TV   D G    +   +V V V   N  
Sbjct: 1484 STKL--FHLDPKSGVLVMTEELDYEKIAIHTLTVMVRDQGIPVKRNFAKVVVHVEDCNDH 1541

Query: 152  SPVFQQNTYDVNVSEGA 168
            SP F    Y+V VS  A
Sbjct: 1542 SPAFLSPRYEVGVSNLA 1558



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 12/165 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            L+V+K+ LD +  +   F  ++ A +      S    +T+N+ D+NDN P          
Sbjct: 2320 LIVTKQVLDYE--SRKHFNLKIKATDNGTIPLSSETFVTINVTDVNDNPPDFDSSRYKAT 2377

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV--SNTGLHKFRIDPRSGVIETTG--K 115
              +  +    ++KI A+D D G ++++    Y +   N G + F I+  SG+I  +   +
Sbjct: 2378 LDEMAKCGHIVIKIHASDPDTG-DSDLNNLKYKILSGNEGRY-FNINESSGIISFSNVCR 2435

Query: 116  LIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
                  Y++TV  +D G       V + ++   N  +P F+Q+ Y
Sbjct: 2436 RNLDPHYNLTVAVSD-GVFQKTAPVSIDMI-NSNRHNPYFKQSVY 2478


>gi|328707355|ref|XP_001946378.2| PREDICTED: protocadherin Fat 4-like [Acyrthosiphon pisum]
          Length = 1749

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 18/149 (12%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGV 82
           K+ +AA V     VN+ D NDN P+          P  +  G +   I  + ATD D G+
Sbjct: 470 KEASAAHV----QVNVLDANDNLPKFAQSTYAYSIPENLVPGTS---IANLTATDIDSGI 522

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
           N EITYS+      G+ KF  DP  G I  TGK+   +Q  YS+T++A D G +S+  ++
Sbjct: 523 NGEITYSL---QGFGMDKFGSDPEFGGIYLTGKVDYEQQSSYSLTLEAKDGGNRSTHVVI 579

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            V +V   N  +PVF    Y   + EG +
Sbjct: 580 LVEIV-DVNDNTPVFNSLEYKRTIREGGT 607



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDN 78
           + +    K G   S  V + V + D+NDN P    +   +   + G   +    ++A+D 
Sbjct: 561 YSLTLEAKDGGNRSTHVVILVEIVDVNDNTPVFNSLEYKRTIREGGTEFQPKFFVQASDA 620

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTGGK 134
           D G+N+ I YS+   +  G+    ++P +G +     + +      QY + ++ATD G  
Sbjct: 621 DSGLNSMIRYSVTSSNYNGV--VMVNPITGELTLNSPVNSSHTSRGQYEVVIRATDLGIP 678

Query: 135 SSQTIVEVSVVPG-PNTRSPVFQQNTYDVNVSE 166
              +   + V  G P  + P+F+  TY V + E
Sbjct: 679 PLHSDANLYVRVGVPGNQRPMFKNLTYSVTIPE 711


>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
          Length = 4349

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 VYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCTVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + + + D+NDN P         RLP  + P+      +   + ++ A+D D G+N  +TY
Sbjct: 1228 VVIGILDVNDNPPVFSHKLFNVRLPERLSPV------SSGPVYRLVASDLDEGLNGRVTY 1281

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            S+      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P
Sbjct: 1282 SVKESDEEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIP 1338

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1339 QPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1373



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  +  
Sbjct: 3306 TVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--IGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDWEQASSYSLKLRATDSGQPPLHEDTDITIQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G   ++      A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDITLKKPFDYQALNKYRLKVIAQDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + PR   +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIVPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   +  G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNGEGF--FNINALLGIITLAQKLDRANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSTPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCTVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIS 3197

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q +     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     V T+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGKLVVTL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+ +  +       I+P +GV++    L+  E
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYSM-NPEDLVKDVIEINPVTGVVKVKDSLVGLE 2653

Query: 121  QYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
              ++   ++A D G     ++V V +   P   S P F +  Y  +  E     S +  +
Sbjct: 2654 NQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSALEDLPEGSEIGVV 2713



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP +GV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSTGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPD 1566



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDRDSG 2302



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FIIHPVTGLLSTARQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V + +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + IV + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIHQDWPVGKSIVTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  +S   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--ISGNELEYFDLNHFSGVISLKRSFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L       Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEVTNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 31/160 (19%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVV 145
              ++E          Y++++ A+D+G   + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVI 1019


>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
          Length = 4349

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 VYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCTVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + + + D+NDN P         RLP  + P+      +   + ++ A+D D G+N  +TY
Sbjct: 1228 VVIGILDVNDNPPVFSHKLFNVRLPERLSPV------SSGPVYRLVASDLDEGLNGRVTY 1281

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P
Sbjct: 1282 SIKESDEEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIP 1338

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1339 QPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1373



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  V  
Sbjct: 3306 TVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--VGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        +++V V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAVQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G   ++      A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDITLKKPFDYQALNKYRLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCTVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIS 3197

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+ + D N + P    +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIRVEDGNLHPPCFTQLHYEASVPDTIVPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ ATD D GVNAE+ YS+   +  G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRATDADRGVNAEVHYSLLKGNGEGF--FNINALLGIITLAQKLDRANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q +     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     V T+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGKLVVTL 2928



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPHYEANVSELATCGHLVLKV 2401



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP +GV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSTGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIRVEDGNLHPPCFTQLHYEASVPD 1566



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+ +  +       I+P +GV++    L+  E
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYSM-NPEDLVKDVIEINPVTGVVKVKDSLVGLE 2653

Query: 121  QYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
              ++   ++A D G     ++V V +   P   S P F +  Y  +  E     S +  +
Sbjct: 2654 NQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSALEDLPEGSEIGVV 2713



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R +VIAR+  G   S+     V +   N + P L   P  +++  E       I  T 
Sbjct: 2138 KYRLKVIARD--GGTPSLQSEEEVLVTVRNKSNP-LFQSPYYKVRVPENITLYTPILHTQ 2194

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GK 134
                    + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G 
Sbjct: 2195 ARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGS 2252

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S+  VEV +V   N   P F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2253 FSEATVEV-LVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDRDSG 2302



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 38.9 bits (89), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)

Query: 8    NLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------RLPM--- 55
            +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       RL +   
Sbjct: 880  HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNRLKVPED 937

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG--VIET 112
            +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G  ++E 
Sbjct: 938  LPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTGALILER 985

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGA 168
                     Y++++ A+D+G    + +   VEV V+    N   P F    Y   V E +
Sbjct: 986  ELDFERRAGYNLSLWASDSGRPLARRTLCHVEVIVLDVNENLHPPHFASFVYQGQVQENS 1045

Query: 169  SINSTVATITVSRLASG 185
               + V  +      SG
Sbjct: 1046 PSGTQVMVVAAQDDDSG 1062



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FIIHPVTGLLSTARQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V + +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + IV + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIHQDWPVGKSIVTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  +S   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--ISGNELEYFDLNHFSGVISLKRSFISLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|332837491|ref|XP_001136982.2| PREDICTED: protocadherin Fat 3 [Pan troglodytes]
          Length = 4557

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R   V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHFVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V+++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N+  
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNS-- 3074

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ + + ++   N   PVF
Sbjct: 3075 -EFYLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NMFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 MMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I+P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            VS+ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VSINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESTANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         + ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTVIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E    Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKALDYEHTSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--STANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       +   +T+++ D ND+ P    P+      ++      ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFVINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ + D D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++ D+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETMGSYWLTV 1118

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
             ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502



 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++A+   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853



 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E  +  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENVAAGTKV 2515



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
 gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
          Length = 3556

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 2007 LITTVGKLDRELQ--ASYNFMVLAMDGGRYEVRSATVPVQ--INVLDINDNRPVFERYPY 2062

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 2063 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 2119

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV  FQ  TY V + E
Sbjct: 2120 QSLASESGKLLHLEVIARDKGTPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 2177



 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 903  QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 962

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + +++YS+  V ++G   F ID RSG +  +  L   + +++S+ V ATD G  S  T +
Sbjct: 963  SGQVSYSL--VGDSGKRLFAIDARSGHLILSQHLDYESSQRHSLIVTATDGGVPSLSTNL 1020

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF++  Y VNVSE  SIN+ +  +  S L +G
Sbjct: 1021 TILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTG 1066



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + ++++D+NDNAP +  P    + 
Sbjct: 1208 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1265

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L  
Sbjct: 1266 VREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDH 1325

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V A+D G    +T+  + V V   N   P F  ++    V E A++   V 
Sbjct: 1326 EERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVG 1385

Query: 176  TIT 178
            +I+
Sbjct: 1386 SIS 1388



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 454 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHA 511

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ +TYS+     T    F+IDP++G+I T   +  
Sbjct: 512 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 571

Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 572 ETEPVPQLTVIARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 631

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 632 KVSASDPDCGVNAM 645



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAPR  +      +
Sbjct: 1904 LSARPLDRE--QHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1961

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +++I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1962 QEDAPLGT-SVLQINAVDADLGVNARLVYSL---ANETQWQFAIDSQSGLITTVGKLDRE 2017

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V A D G    +S+   V+++V+   + R PVF++  Y
Sbjct: 2018 LQASYNFMVLAMDGGRYEVRSATVPVQINVLDINDNR-PVFERYPY 2062



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
            R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 1001 RHSLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-EEYSVNVSESRSINAQIIQVN 1059

Query: 75   ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A+D D G NA ITY I              S+   H F I P SG I     L     ++
Sbjct: 1060 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDRETRDR 1118

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y + V ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S
Sbjct: 1119 YQLMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1178

Query: 181  RLASG 185
             L  G
Sbjct: 1179 DLDLG 1183



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  VIAR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 578 QLTVIARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 637

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 638 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 696

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +  ++++ +    + R PVF    Y V++ E
Sbjct: 697 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRE 726



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P         +   E      I  + A+D D G NA++ YSI    N
Sbjct: 1832 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1890

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID  SG  E + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1891 LG-NKFSIDSSSG--ELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1947

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F+ + Y  +V E A + ++V  I
Sbjct: 1948 NAPRFKLSKYTGSVQEDAPLGTSVLQI 1974



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI      
Sbjct: 2848 FRLELHDENDNDPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD 2907

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+D  +G++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2908 ESSWKMFRVDSETGLV-TSAFVFDYEQRQRYDMELLASDMGGKKAGVAVRVE-IESRDEF 2965

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2966 TPQFTERTY 2974



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  V+A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1111 LDRETRD--RYQLMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1168

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1224

Query: 125  TVQATDTG 132
             V+A D G
Sbjct: 1225 VVEARDQG 1232



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 270 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 326

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 327 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 386

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 387 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 421



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 28/175 (16%)

Query: 38   SLTVNLN--DINDNAPRLPMIPP-------IQIQAGEARR---QIVKIEATDNDLGVNAE 85
            S+TV L   D NDNAP+   + P         +   +A R    +  I A D D G N  
Sbjct: 1585 SVTVRLRVLDANDNAPQF--VSPNSSGGKTASLSISDATRIGEVVAHIVAVDRDSGDNGR 1642

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---KS 135
            +TY I      G  +FRI+ ++G+IE        T  +  G ++++ + A D G    K 
Sbjct: 1643 LTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIINAKDHGQPEPKQ 1700

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
            S   + + +V G +   P F Q  Y   + E     S V  +T   L  G  + N
Sbjct: 1701 SSLNLHL-IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL-HGAEMAN 1753



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 28/208 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPI 59
            LVV++  LDR+  +  +FR ++ A +   T    S  +++ + + D+NDNAP  P   PI
Sbjct: 1435 LVVARL-LDREVQS--EFRLEIRALDTTATNNPQSSAITVKIEVADVNDNAPEWPQ-DPI 1490

Query: 60   QIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRSGV 109
             +Q  EA      I    ATD D G N ++ Y +              +  F +D  +G 
Sbjct: 1491 DLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMTLFSMDSLTGS 1550

Query: 110  IETTGKLIAG--EQYSITVQATDTGGKSS---QTIVEVSV-VPGPNTRSPVFQQ------ 157
            +     L     ++Y + VQA D     +   QT V V + V   N  +P F        
Sbjct: 1551 LSLQAPLDFETVQEYLLIVQALDQSSNVTERLQTSVTVRLRVLDANDNAPQFVSPNSSGG 1610

Query: 158  NTYDVNVSEGASINSTVATITVSRLASG 185
             T  +++S+   I   VA I      SG
Sbjct: 1611 KTASLSISDATRIGEVVAHIVAVDRDSG 1638



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 683 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKAPTQASST--P 738

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +   +    + + 
Sbjct: 739 IVAVVATDPDSGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVARPDMLSVRTQPMHMLN 796

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
           + ATD G   S    +V +S++     R P+F++  Y+  V E    G  + S +A
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA 851



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 83/210 (39%), Gaps = 53/210 (25%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR------------LPMIPPIQIQAGE 65
            ++   VIA +    A +V   LTV +ND NDNAP             LP I  I  ++  
Sbjct: 2500 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAVLPAISEIS-ESLS 2555

Query: 66   ARRQIVKIEATDNDL-GVNAEITYSI--------YHVSN--TGLHKFRIDPR---SG--- 108
               +++ + ATD D  G N+++ Y I         H SN    ++  R+ P    SG   
Sbjct: 2556 VDFELLTVNATDADSEGNNSKVMYIIEPPQEGFTVHSSNGVVSVNMTRLQPAVSPSGDYF 2615

Query: 109  ---VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
               + +  GK +      + VQA+D G   SQ                 F QN Y   +S
Sbjct: 2616 VRIIAKDAGKPVLKSSTLLRVQASDNGSGRSQ-----------------FLQNQYRAQIS 2658

Query: 166  EGASINSTVATITVSRLASGCAIMNKEENS 195
            E A + S V  +    L    AI+   E S
Sbjct: 2659 ESAPLGSVVLQLGQDALDQSFAIIAGNEES 2688



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KI 73
            P +    ++AR       +    L + L D NDN+P+         +  G  +   V ++
Sbjct: 2285 PNEIHVVLVARTADAPFLATYAELVIELEDENDNSPKFSQKQFAATVSEGNNKGTFVAQV 2344

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + ATD
Sbjct: 2345 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 2402

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + V +V   N   P F  N   V VSE   + + + +I+
Sbjct: 2403 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2450


>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
          Length = 4586

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2546 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-YEVD 2602

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI  
Sbjct: 2603 IGSSAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGL 2662

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D+G  S +++V V V +  P  + P F +  Y   VSE   I + +  
Sbjct: 2663 ENEFFTFFVRAVDSGSPSRESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTEIDL 2722

Query: 177  I 177
            I
Sbjct: 2723 I 2723



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITY+I  
Sbjct: 3213 TVVVSVLDINDNPPVFEYREYGATVSEDILLG---TEVLQVYAASRDIEANAEITYAI-- 3267

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G I     L   +  +Y +TV+ATD G  S   +  VS+ V   N
Sbjct: 3268 ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDVN 3327

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              SPVF Q+TY   +SE A +  +V T+
Sbjct: 3328 DNSPVFSQDTYTAVISEDAVLEQSVITV 3355



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1546 IIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1604

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G+I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1605 G-NSFTIDPILGLIKTAKELDRNSQVEYDLMVKATDKGNPPMSEITSVHVFVTIADNASP 1663

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE   I S V  +T    +S
Sbjct: 1664 KFTSKEYSVEISETVGIGSFVGMVTAQSQSS 1694



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 10/169 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1088 VIETSDGLDRE--STSHYWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1145

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             I+       +V+IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1146 IIENSPKDVSVVQIEAFDADSSSNDKLTYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1203

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + +
Sbjct: 1204 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRL 1252



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN PR   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 909  VLLKVSLEDVNDNPPRF--IPPNYRVKVREDLPEGTIIMWLEAHDPDLGQSSQVRYSLL- 965

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +     L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 966  --DHGEGHFDVDKLSGAVRIVQHLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDV 1023

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF        V E   I S+V T++     +G
Sbjct: 1024 NENLHPPVFSSFVEKGVVKEDVPIGSSVMTVSAHDEDTG 1062



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPP 58
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P     +   
Sbjct: 2974 WKVFVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKSLYSE 3028

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T   L  
Sbjct: 3029 TIPEDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTLAPLDR 3085

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + + + V E
Sbjct: 3086 EEQAVYNLLVKATDGGGRFCQASI-VLTLEDVNDNAPEFSADPHAITVFE 3134



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  I ++ ATD D G NAEI+YSI 
Sbjct: 1231 VKILDENDNKPQFLQKFYKIRLPERERPERERNSKREPIYRVIATDKDEGPNAEISYSIE 1290

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1291 DGNEHG--KFFIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1348

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F++  +   V E   +   +  I+V
Sbjct: 1349 PSLEPISFEEPFFTFTVMESDPVAHMIGVISV 1380



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3091 YNLLVKATDGGGRFCQASIVLTLEDVNDNAPEFSADPHAITVFENTEPGTLLTRVQATDA 3150

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+    N+   +F I+  SG+++    L    +  Y++T++A D G    
Sbjct: 3151 DAGLNRKISYSLV---NSADGQFSINEFSGILQLEKPLDREVRAVYTLTLKAVDQGLPRR 3207

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3208 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDILLGTEVLQV 3250



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++++N+ D+NDN+P         + + +A
Sbjct: 3289 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVSINVTDVNDNSPVFSQDTYTAVISEDA 3346

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T  L    I+G 
Sbjct: 3347 VLEQSVITVMADDADGPSNSHIRYSITD-GNQG-SPFTIDPARGEVKVTRLLDRETISG- 3403

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V
Sbjct: 3404 -YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQENKPVGFSVLQLVV 3462

Query: 180  S 180
            +
Sbjct: 3463 T 3463



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   E     ASV VS+ V   D NDN+P L   P     ++      ++++ 
Sbjct: 2772 YQFSILARCAHEDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENLPGGSRVIQA 2829

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L   E   Y I V A+D
Sbjct: 2830 RASDLDSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDHYQIKVVASD 2889

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2890 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2927



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  ++  E       I+ + ATD D G N ++ Y+I   +      
Sbjct: 705 HSVNAHAPQFRSTLPAGVEVKENHPVGASIIFMNATDLDTGFNGKLVYAISGGNEDSC-- 762

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ + A+D G   K++  +V++ V+   N   P F 
Sbjct: 763 FVIDMETGMLKILSPLDRETTDKYTLNITASDLGIPQKAAWRLVDIRVLDA-NDNPPEFL 821

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 822 QESYFVEVSEDKEVDSEI 839



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQI------VKIEATDNDL 80
            PVSL+      V + D+N+N     + PP+    ++ G  +  +      + + A D D 
Sbjct: 1007 PVSLSSTCYVEVEVIDVNEN-----LHPPVFSSFVEKGVVKEDVPIGSSVMTVSAHDEDT 1061

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G + EI YSI   S  G+  F+ID  +GVIET+  L   +   Y +TV A D G     +
Sbjct: 1062 GRDGEIRYSIRDGSGVGV--FKIDEETGVIETSDGLDRESTSHYWLTVYAADRGVVPLSS 1119

Query: 139  IVEVSVV------PGPNTRSPVF 155
             +E+ +         P T  PV+
Sbjct: 1120 FIEIYIEVEDVNDNAPQTSEPVY 1142



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 13/130 (10%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     T   KF
Sbjct: 812 DANDNPPEF-LQESYFVEVSEDKEVDSEIIQVEATDKDLGPNGHVTYSIL----TDTDKF 866

Query: 102 RIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQ 156
            ID  +GV++    L    Q  + + ++A D   +  Q +  V +   +   N   P F 
Sbjct: 867 SIDSVTGVVKIVSPLDREVQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPRFI 926

Query: 157 QNTYDVNVSE 166
              Y V V E
Sbjct: 927 PPNYRVKVRE 936



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 117 IVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 176

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  YS    ++     F I P SG I  TG+L   E   Y + + A D G K
Sbjct: 177 GTNGEFYYSFKDRTDV----FAIHPTSGAIVLTGRLDYAETKLYEMEILAVDRGMK 228



 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+   ITY I  V++    +F  + R G I T  KL     A +  S+ 
Sbjct: 2509 VIEVKATDGDSGIYGHITYHI--VNDFAKDRFYTNDR-GQIFTLEKLDRETPAEKVISVR 2565

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+V++   A   ++V  +  S    G
Sbjct: 2566 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKYEVDIGSSAPKGTSVIKVLASDADEG 2624



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 5/143 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P            +A      +V++ ATD+D   N  I+Y
Sbjct: 2259 TGAHAEVFVDIIVEDINDNPPVFGQQSYAATLSEAAVIGTSVVQVRATDSDSEPNRGISY 2318

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVV 145
             ++   +     F ID  +G+I     L     +Q+ I V+A D G    S  +V    V
Sbjct: 2319 HMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVRALDGGMPPLSSDVVVTVDV 2378

Query: 146  PGPNTRSPVFQQNTYDVNVSEGA 168
               N   P+F Q  Y+  +SE A
Sbjct: 2379 TDLNDNPPLFDQQIYEAKISEHA 2401



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+  L   A  Q+
Sbjct: 1472 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSETLDHEAIHQH 1526

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1527 VLTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1583



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 8/144 (5%)

Query: 46   INDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            +NDN P     I   +I         V  ++A D D      + YSI  +S      F I
Sbjct: 2381 LNDNPPLFDQQIYEAKISEHAMHGHFVTCVKAYDADSSDIDRLDYSI--LSGNDHKNFVI 2438

Query: 104  DPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            D  +G++  +   +      YS+ V  +D   +SS   V V+V+ G N  SPVF Q+ Y+
Sbjct: 2439 DGETGIVTLSNVRRHTLKPFYSLNVSVSDGVFRSSAQ-VHVTVIGG-NLHSPVFLQSEYE 2496

Query: 162  VNVSEGASINSTVATITVSRLASG 185
            V ++E A +++ V  +  +   SG
Sbjct: 2497 VELAENAPLHTLVIEVKATDGDSG 2520



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N   PVF Q
Sbjct: 1708 FDINPHSGSI-VTQKALDFETLPIYTLIIQGTNMAGLSTNTSVLVHL-QDENDNLPVFMQ 1765

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE AS NS V T
Sbjct: 1766 AEYTGLISESASTNSVVLT 1784



 Score = 38.5 bits (88), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+ + DIND  P     +     +    
Sbjct: 1832 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLYEASLLLPTY 1891

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1892 RGVKVITVNATDADSSAFSQLMYSITE-GNIG-EKFFMDHKTGTITVQNTTQLRSRYELT 1949

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G   S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1950 VRASD-GRFVSFTSVKINVKESKESQLK-FTQDFYSAVVKENSTEARTLAVIT 2000



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 22/134 (16%)

Query: 35  VPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
           V V  TV LN++NDN P    I      P  +  GE   QI  + A D D     E+   
Sbjct: 549 VEVLATVTLNNLNDNTPLFEKINCEGTIPRDLGVGE---QITTVSAIDAD-----ELQLV 600

Query: 90  IYHV-SNTGLHKFRIDPRSGVIETTGKLIAG-----EQYSITVQATDTGGKSSQTIVEVS 143
            Y + +   L  F ++P SGV+     L+ G       +S+ + ATD    ++   + ++
Sbjct: 601 RYQIEAGNELDLFSLNPSSGVLSLKQSLLDGLGTKVSFHSLRITATDGENFATPLYINIT 660

Query: 144 VVPGPNTRSPVFQQ 157
           V     +R PV  Q
Sbjct: 661 VAA---SRKPVHLQ 671


>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
          Length = 4559

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VMTTERLDRENPLEGDV--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D GVN+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAMDPDDGVNSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P    P F Q+ Y   V+E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PEIFLPSFTQSQYSFTVAEDTAIGSTVD 2728

Query: 176  TITV 179
            T+ +
Sbjct: 2729 TLRI 2732



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIISVSKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSVKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNTDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +N+ + +I
Sbjct: 2187 DKPFYTASINEDIRMNTPILSI 2208



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 18/183 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            +++ ++ LDR+      +   V A ++  G + S   ++T+ + DINDN P       L 
Sbjct: 3186 IIILEQPLDRE--QQSSYNISVRATDQSPGQSLSSLATVTITVLDINDNPPVFERRDYLV 3243

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I  + 
Sbjct: 3244 TVP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVSE 3297

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
             L     +++ + V+A D G  +      VS+ +   N  +P F Q+ Y   +SE A + 
Sbjct: 3298 VLDYEVCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNAPQFSQDVYSAVISEDALVG 3357

Query: 172  STV 174
             +V
Sbjct: 3358 DSV 3360



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 8/141 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y    +G 
Sbjct: 3017 VTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKVSAKDADIGSNGDIRYSLY---GSGN 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            ++F +DP SG ++T   L       Y++  +ATD GG+   + V + ++   N   PVF 
Sbjct: 3074 NEFFLDPESGELKTFAPLDRERVPVYNLIARATDGGGRFCHSDVRL-ILEDVNDNPPVFS 3132

Query: 157  QNTYDVNVSEGASINSTVATI 177
               Y+  V E  +  + +  +
Sbjct: 3133 SEHYNACVYENTATKALLTRV 3153



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 20   RFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEA 75
            RF ++   K G   A S   ++++NL D+NDNAP+        + + +A     ++ + A
Sbjct: 3306 RFYLVVEAKDGGTPALSAAATVSINLTDVNDNAPQFSQDVYSAVISEDALVGDSVILLIA 3365

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  VS     +F +DP  G+++   KL    ++G  YS+ VQA D+
Sbjct: 3366 EDVDSQPNGQIHFSI--VSGDRDSEFAVDPVLGLVKVKKKLDRERVSG--YSLLVQAVDS 3421

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  +  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3422 GFPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENRPVGTSILQLLVT 3471



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNNPVF-----LQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G+I    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIIYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPTFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F ++ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAMNIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TISHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D G   S ++V + V    ++    F Q+ Y  ++SE  +  + VA +
Sbjct: 1952 MLIVKVSD-GKFYSTSMVNIMVKEAMDS-GLQFTQSFYSTSISENNTNITKVAIV 2004



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YNLIARATDGGGRFCHSDVRLILEDVNDNPPVFSSEHYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   +N G   F ID  SG+I     L   +Q  Y+I+V+ATD   G+S
Sbjct: 3159 DVGINRKVVYSLADSAN-GF--FSIDGTSGIIILEQPLDREQQSSYNISVRATDQSPGQS 3215

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSMSMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPNTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAMDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPMFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDLLINDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSASGLI-LTARMLDHELVQHCTLKVRATDNGFPSLSSEVLVHIH 2383

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2384 -ISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E +     +   +T+ + D ND+ P    P+      ++      ++ + A D D
Sbjct: 441 EVYKLEVKNKEGDLKAQVTIGIEDANDHTPEFQQPLYDAFVNESVPVGTSVLMVSAYDKD 500

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 501 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYR 557

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            ++   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IIYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPTFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 42.7 bits (99), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI TT +    E+   Y +T+QAT+  G +S   V + +V   N  +PVF  
Sbjct: 1714 FTINPYSGVI-TTRRAPDYERTSSYQLTIQATNMAGMASNATVNIQIV-DENDNAPVFLF 1771

Query: 158  NTYDVNVSEGASINSTVATITVSRL 182
            + Y  ++SE A +NS V  +  S L
Sbjct: 1772 SQYSGSLSEAAPVNSIVRNLDNSPL 1796



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTAQDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + ++++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 2362 LKVRATDNGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2421

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGVI  +   K      YS+ V  +D G  +S
Sbjct: 2422 DSSDIDRLDYSI--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 2478

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2479 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  +PVF Q++Y VN+ E + I + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNNPVFLQDSYSVNILESSGIGTEIIQV 853



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYTI--INDFAKDRFLID-SNGQVMTTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V+  +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVKNKEGDLKAQVTIG----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATIT 178
            YD  V+E   + ++V  ++
Sbjct: 476 LYDAFVNESVPVGTSVLMVS 495


>gi|345320270|ref|XP_001519499.2| PREDICTED: protocadherin gamma-C4 [Ornithorhynchus anatinus]
          Length = 867

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------ 55
           L+V K  LDR+  N   +   + A +      S  V + +N+ D NDNAP          
Sbjct: 194 LIVGKP-LDRETQN--SYHLVLTAVDGGDPVLSGTVEIRINVTDANDNAPVFSQDVYKVS 250

Query: 56  ----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
               +PP           ++++EATD D G NA +T++  +V+ T  H F +DP SG I 
Sbjct: 251 LRESLPP--------GSPVLRVEATDKDEGANARVTFAFSNVAQTVRHAFALDPVSGEIS 302

Query: 112 TTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           T G L    I G  YS+ ++A D GG  +Q  VE+ ++   N  +P     +    + E 
Sbjct: 303 TKGILDFEGIKG--YSLVLEAKDGGGLVTQCTVEIEIL-DENDNAPEVTFTSISSPIPED 359

Query: 168 ASINSTVATITVSRLASG 185
           + + + +A I      SG
Sbjct: 360 SELGTVIALIRTRDRDSG 377



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--------PMIPPIQIQAGEARRQI 70
            +F+V AR++     S  V++ + + D+NDNAP +         + P     +  A   +
Sbjct: 533 LQFEVQARDRGEPPLSSTVTVRLFILDVNDNAPAVLRPQARPGALCPQALPPSASAGHLV 592

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            K+ A D D G NA ++Y ++   +  L  F +   +G I T G + A
Sbjct: 593 TKVTAVDLDSGYNAWVSYQLFEAPDPTL--FAVSRYAGEIRTAGPIPA 638


>gi|397518036|ref|XP_003829204.1| PREDICTED: protocadherin alpha-2 [Pan paniscus]
          Length = 808

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 25/115 (21%)

Query: 19  FRFQVIAREKQGTAASVP-----VSLTVNLNDINDNAPRL------------PMIPPIQI 61
            +FQV AR+     A VP     V+L V + D NDNAP L              + P  +
Sbjct: 531 LQFQVSARD-----AGVPPLGSNVTLQVFVLDENDNAPALLEPRAGTAAGAVSELVPWSV 585

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            AG     + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 586 GAGHV---VAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPVFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
            leucogenys]
          Length = 4007

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2623 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 2673

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 2674 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 2730

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 2731 ALDRERKDVFNLVAKATDGGGRSCQADVTL-YVEDVNDNAPRFFPSHCAVAVFDNTTVKT 2789

Query: 173  TVATI 177
             VA +
Sbjct: 2790 PVAVV 2794



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPVFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F IDP +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDPVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            ++    AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPRPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  V  
Sbjct: 2965 TVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--VGG 3022

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3023 NQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3081

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3082 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3110



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+ + D N + PR   +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIRVEDGNLHPPRFTQLHYEASVPDTIAPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   ++ G   F I+   G+I    K        +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNINALLGIITLAQKFDRANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPLFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2422 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2481

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2482 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2541

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2542 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2587



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+ + D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 2740 FNLVAKATDGGGRSCQADVTLYVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 2799

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 2800 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 2856

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 2857 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 2890



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2196 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2253

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+A
Sbjct: 2254 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVA 2310

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +V E
Sbjct: 2311 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSVPE 2361



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIRVEDGNLHPPRFTQLHYEASVPD 1566



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           I K+ ATD DLG NAE  Y+     NT    F I P SGV+   GKL
Sbjct: 167 ICKVTATDADLGQNAEFYYAF----NTRSEMFAIHPTSGVVTVAGKL 209



 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +TVA +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTVAELT 843



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    + ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTVAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQAST---TVVIDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    +   EVS+   +   N   P+F++     ++ +   +  ++ T++
Sbjct: 534 RASDWGSPFRRE-KEVSIFLQLRNLNDNQPMFEEVNCTGSIHQDWPVGKSIMTMS 587



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 31/160 (19%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ +    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRF----VLTDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVV 145
              ++E          Y++++ A+D+G   + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVI 1019


>gi|321459270|gb|EFX70325.1| hypothetical protein DAPPUDRAFT_300527 [Daphnia pulex]
          Length = 2952

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 90/186 (48%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A++++G        + VNL DINDNAP  P    +    + G 
Sbjct: 1423 LDRDQPNGRPQWRFTVFAQDEKGEGLVGYADVQVNLKDINDNAPLFPHGVYLGNVTENGT 1482

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA++TYSI       NTG+  F I+  +GVI+T    +  
Sbjct: 1483 AGMVVMTMTAVDYDDPNEGSNAKLTYSIEKNVIDENTGMPIFEIESETGVIKTAVPGLDR 1542

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI---NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +   V E   I   ++ 
Sbjct: 1543 EKTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKSEWYTEVDETDGIALPDAP 1601

Query: 174  VATITV 179
            + T+TV
Sbjct: 1602 ILTVTV 1607



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 85/187 (45%), Gaps = 26/187 (13%)

Query: 7   ENLD-RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----- 60
           ++LD  D   P  ++ QV A E  G   S  V LT+ + D+NDN P+  + P  Q     
Sbjct: 549 KDLDFEDLRQPHVYQLQVTATEDSG-GFSTSVELTIRVTDVNDNVPKFEL-PDYQAHNID 606

Query: 61  --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             I  G +   I+K++ATD+D G NAEI YS+          F ID  +GVI    +L A
Sbjct: 607 EDIPVGTS---ILKVKATDSDSGSNAEIEYSVSD------DHFAID-SNGVISNGKQLDA 656

Query: 119 GEQ---YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                 Y  TV A D G   KS    V +      N   P F Q  Y  NV E A  N+ 
Sbjct: 657 DNNNAYYEFTVTARDKGESPKSGTATVRI-YTKNKNDEEPKFSQGVYTPNVDENAGPNTL 715

Query: 174 VATITVS 180
           V T+  S
Sbjct: 716 VTTVVAS 722



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLT------VNLNDINDNAPRLPMIPPI-- 59
           +LDRD     K+   V A +         ++ T      V + D+NDN P          
Sbjct: 760 SLDRD-----KYELNVTAIDDGACCGGTGLTHTSTAVVVVFITDVNDNKPVFSECSSYSP 814

Query: 60  QIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
           +I+ G      +V+++ATD D GVN ++ YSI    N    KF +D  +G I  T K+  
Sbjct: 815 KIEEGAPNGSPVVRVQATDADKGVNGQVKYSIVQQPNQKGTKFTVDEETGEI-FTNKVFD 873

Query: 118 ----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV +  +I +
Sbjct: 874 REGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDTNIGT 933

Query: 173 TVATITVS 180
            +  ++ S
Sbjct: 934 NILRVSAS 941



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 6/169 (3%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 879  GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDTNIGTNILRV 938

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
             A+D D   N  I Y++   ++  L  F I P SG I    K +  E Y +   A D G 
Sbjct: 939  SASDEDADNNGAIVYNLTAYNSQDLEYFTILPESGWIVLI-KPLDRETYKLEAVAQDRGF 997

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                  VEV + V       PV+ Q  Y  + V E  ++   V ++  S
Sbjct: 998  PPLSRTVEVQIDVVDRANNPPVWDQVVYGPIFVKENKNVGDKVVSVKAS 1046


>gi|327283350|ref|XP_003226404.1| PREDICTED: protocadherin-11 X-linked-like, partial [Anolis
           carolinensis]
          Length = 1038

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 20/191 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP    P+I     +      Q+ KI A
Sbjct: 431 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISA 490

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
           TD D G NA+I+Y +      GL     F +D R+G++    KL   +Q  YS TV A D
Sbjct: 491 TDADSGRNADISYML------GLDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKD 544

Query: 131 TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG---- 185
            G    QT   V+V V   N  SP F  N Y+  V E   +  TV  ITV+   SG    
Sbjct: 545 NGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAA 604

Query: 186 --CAIMNKEEN 194
              +I+N  +N
Sbjct: 605 VTLSILNGRDN 615



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V + N+  D    G + FQV A +      S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P+    G     + K+ A DND G+NAE+ YSI   ++ GL  F ID  +G +    
Sbjct: 683 DLVPMSTSPGSV---VTKVFAVDNDTGMNAELRYSIIGGNSRGL--FVIDQLTGNVSLRE 737

Query: 115 KLIAGEQ--YSITVQATDTGGKSS 136
           K+++ +   + + ++  D G   S
Sbjct: 738 KVVSADHGLHRLVIKVNDLGQPES 761



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 27/183 (14%)

Query: 22  QVIAREKQGT-------------AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           Q++ RE++ T             A S    L V + D+NDN P       I++   E   
Sbjct: 205 QILDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVF-KDNDIEVSVPENAP 263

Query: 66  ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
               + ++ ATD DLG NA+I +     +SN     F ID  +G+I     L   E   +
Sbjct: 264 VGTSVSQLHATDADLGSNAQIHFYFSSQISNLARRLFAIDNTTGLITIKEPLDREESSVH 323

Query: 123 SITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            +T+ A+D     S+  V V+V      +P  +TR  +   N   V +SE A +N+ +A 
Sbjct: 324 KLTILASDGSSTPSRATVTVNVTDINDNIPSIDTRYIINPVNG-TVLLSEKAPLNTKIAL 382

Query: 177 ITV 179
           ITV
Sbjct: 383 ITV 385



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------- 51
           ++ +   LDR+  +  ++ F V+A++          ++TV++ D NDN+P          
Sbjct: 521 ILTAVRKLDREKQD--RYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFY 578

Query: 52  ---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
               LPM   + +           I  TD D G NA +T SI +    G   F IDP +G
Sbjct: 579 VPENLPMYGTVGL-----------ITVTDADSGENAAVTLSILN----GRDNFIIDPLTG 623

Query: 109 VIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
           VI         +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVV-DVNDNRPVF 673



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D+GVN    Y +      G + 
Sbjct: 129 IEDINDNAPLFPSTVINISIPENTAINSRYSVPSAVDPDIGVNGIQHYELLK----GQNV 184

Query: 101 FRIDPRSGVIET----------TGKLIAGEQ---YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    +IET            +++  EQ   Y + ++  D G   +SS  I++V+V 
Sbjct: 185 FGLD----IIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGNPARSSTAILQVTVT 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+ N  +V+V E A + ++V+ +
Sbjct: 241 -DVNDNRPVFKDNDIEVSVPENAPVGTSVSQL 271



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  KE LDR+  +  K    ++A +  G++     ++TVN+ DINDN P +    +I P
Sbjct: 308 LITIKEPLDREESSVHKL--TILASD--GSSTPSRATVTVNVTDINDNIPSIDTRYIINP 363

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           +       +      +I  I   D D  +N ++T    H        FR+ P      ++
Sbjct: 364 VNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV-----PFRLKPVFDNQFLL 418

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           ET   L      +Y+I + A+D+G    +Q+ + +  +   N  +PVF Q    +++ E 
Sbjct: 419 ETATFLDYETTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPEN 478

Query: 168 ASINSTVATITVSRLASG 185
            +  + +  I+ +   SG
Sbjct: 479 NAPGTQLTKISATDADSG 496


>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
            vitripennis]
          Length = 3357

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 17/187 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
            + ++E LDR+     +    V+    QGT   AA VP  L V++ D+NDN+P +  P   
Sbjct: 1144 ITTREPLDRESKAVHEL---VLEARDQGTPSRAARVP--LRVSVLDVNDNSPEIVDPQGD 1198

Query: 58   PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
             + ++  +    ++ ++ A DNDLG NA +TY+I    ++ G + F IDP SG+I+T   
Sbjct: 1199 VVSVREEQPPGTEVARVRALDNDLGENASVTYTILKDRDSDGYNVFAIDPISGMIKTKVA 1258

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   ++  Y ++V+A+D G  +  ++  + V V+   + R P F  ++    V E ASI 
Sbjct: 1259 LDHEDRNVYRLSVKASDAGRPARHSVRALRVEVLALADNR-PTFTSSSLSFKVREDASIG 1317

Query: 172  STVATIT 178
              V +++
Sbjct: 1318 EAVGSVS 1324



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 24/194 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
            ++ +  +LDR+      +RF V+A +    +    SVPV + +   D+NDN P     P 
Sbjct: 1904 VITTAGSLDRE--QQSLYRFLVVATDSGKYEARQTSVPVEIYIG--DVNDNRPIFEEYPF 1959

Query: 58   ----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
                P+  Q G+    I++++A D D   N EI YS     +    KFRI P +G++  T
Sbjct: 1960 KARVPVSTQPGQ---NILRVKANDADDAANGEIVYSFPREQDK--PKFRIHPSTGIVTVT 2014

Query: 114  GKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEG 167
              L    G  Y + V ATD G    S++ ++E  +    +  +PV  FQ ++YD+ V E 
Sbjct: 2015 SSLAQENGRVYRLEVLATDKGNPPLSARGLIEFRIGDLSDL-APVLKFQNDSYDIVVQEN 2073

Query: 168  ASINSTVATITVSR 181
            ++  + V  +T  R
Sbjct: 2074 SAAGTEVIQVTAVR 2087



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 12/167 (7%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEAT 76
            R +++     G   S  +SL+V + D+NDN P         ++  E  R   QIV++ A 
Sbjct: 954  RHRLMISALDGAGLSANLSLSVEVQDVNDNPPVFER-NEYHVEVSEGARLNWQIVQVTAV 1012

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK 134
            D D G NA ++Y +      G   FR+ P SG +   G+L     ++YS+TV ATD G  
Sbjct: 1013 DLDTGNNARLSYRL-----QGSGPFRVSPNSGWVTLAGQLDRETLDRYSLTVLATDNGSP 1067

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ++     + V V   N   P F+++ Y   + E       V T++ S
Sbjct: 1068 AATASASILVTVLDDNDNEPRFEKDLYAFELLENLPSGMLVGTVSAS 1114



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 27/155 (17%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI----- 90
            L V L D+NDN+P+ P+   ++   GE   A   +    A+D D GV   + YSI     
Sbjct: 2709 LRVRLEDVNDNSPKFPVSEYLEF-VGENEPAGTTVFAARASDLDRGVYGALNYSIVSAAM 2767

Query: 91   -------YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIV 140
                   +   +     F IDPRSG + TT  +   EQ   Y+ +V+ATDTGG+S+   V
Sbjct: 2768 AAAAANGFSDIDDSWKLFSIDPRSGAV-TTRAVFDYEQRNRYAFSVRATDTGGRSTAVRV 2826

Query: 141  EVSVVPGPNTRS---PVFQQNTYDVNVSEGASINS 172
             V +    ++R    P F +  Y   V  G ++ S
Sbjct: 2827 RVEI----DSRDEFYPQFTERMYRFGVRPGTALQS 2857



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 43   LNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            + D+NDN P+ P+   ++I   E+      +    A+D D      + YSI H SN    
Sbjct: 875  VEDVNDNPPQFPL-SSVRISVAESHPLHTALYVASASDPDSTPATPLRYSIQHNSN---E 930

Query: 100  KFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
             F ID RSG +    +L    Q  + + + A D  G S+   + V V    N   PVF++
Sbjct: 931  LFGIDARSGEVYLARRLDYETQQRHRLMISALDGAGLSANLSLSVEV-QDVNDNPPVFER 989

Query: 158  NTYDVNVSEGASINSTVATITVSRLASG 185
            N Y V VSEGA +N  +  +T   L +G
Sbjct: 990  NEYHVEVSEGARLNWQIVQVTAVDLDTG 1017



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 50/201 (24%)

Query: 3    VVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V+S  +LDR+  P   K+   V A++K   +     +LTV + D+NDNAP       +  
Sbjct: 1774 VLSAGSLDREAVP---KYVLTVSAKDKGRPSLEARCNLTVVVLDVNDNAPSF-----LHN 1825

Query: 62   QAGEARRQ----------------------------------IVKIEATDNDLGVNAEIT 87
            Q  E R +                                  I+++ ATD+D GVN +IT
Sbjct: 1826 QYSEPRLRAAFAGGDFETYVAASFSQGKYSTSVSEDVAPESSIMQVRATDSDQGVNGKIT 1885

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG-KSSQTIVEVSV 144
            YSI   S+     FR+D  +GVI T G L   +Q  Y   V ATD+G  ++ QT V V +
Sbjct: 1886 YSIAEESS---WLFRVDNLTGVITTAGSLDREQQSLYRFLVVATDSGKYEARQTSVPVEI 1942

Query: 145  VPGP-NTRSPVFQQNTYDVNV 164
              G  N   P+F++  +   V
Sbjct: 1943 YIGDVNDNRPIFEEYPFKARV 1963



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 7/151 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L+V + DINDN P  P    I +  G A   ++    T 
Sbjct: 2277 KYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPEPKIISVHEGTAPGSVLT-AITA 2335

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS 135
            ND+  +  +TY   +VS+ G   F ID   G +  TGKL A    +Y++ V A+D G   
Sbjct: 2336 NDVDSSPALTYRFSNVSHPG--PFSIDRFGGRVVLTGKLDAELRSEYTLHVLASD-GLHE 2392

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + T + V V    N   P F+Q  Y   +SE
Sbjct: 2393 ATTELTVRVT-DLNDNPPRFEQVAYITTLSE 2422



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 14/172 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           YLVV +  LDR+      +   V A +          S  + + D+NDNAPR        
Sbjct: 393 YLVVVERPLDRE--ERPHYELSVEATDAGTPPLRAVRSFRLLVTDVNDNAPRFLRDSYEA 450

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
             ++A E    ++++ A D D G NA + YS+ + +      F ID  +G+I T   +  
Sbjct: 451 HLLEASEPGTSVIRVSAEDADEGPNARVRYSLLNST-----WFAIDEDTGLISTAAHVDC 505

Query: 118 -AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            A     +TV ATD+G    S+   V V+ V   N   P+F++  Y+V++ E
Sbjct: 506 EADPAPLLTVLATDSGKPPLSASATVRVT-VHDVNDNEPIFEKPLYNVSLPE 556



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 21/186 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAP-----RLPMIPPIQI 61
           LDR+     +  +Q++     G +  +   L VN+   D+NDN P     R     P   
Sbjct: 183 LDRE----ARAGYQLLVEALDGGSPPLRSRLHVNVTVQDVNDNPPIFKQSRYVASVPENA 238

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AG 119
             G A   ++K++A+D D G N  I YSI    +     FRIDP +G++     L   + 
Sbjct: 239 TVGTA---VLKVDASDADAGENGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESK 295

Query: 120 EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTV 174
           E++ + + A D G +  +    +SV V   N   P    +F  +     +SE A     V
Sbjct: 296 ERHELVIVARDRGAQPLEASAFLSVHVSDVNDNQPAITVIFLSDDATPKISESAQPGEFV 355

Query: 175 ATITVS 180
           A I+VS
Sbjct: 356 ARISVS 361



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMI---PPIQIQAGEARRQIVKIEA 75
             V+A +      S   ++ V ++D+NDN P    P+     P  +  G   R  +K++A
Sbjct: 513 LTVLATDSGKPPLSASATVRVTVHDVNDNEPIFEKPLYNVSLPEDLPPG---RCFIKVQA 569

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
           +D D GVNA + Y++   S     +F +   +G I     L       + + V ATD GG
Sbjct: 570 SDPDCGVNAMVNYTLAPSSGAA-EQFVVRSDTGDICVRAPLDRETAAYHELPVIATDRGG 628

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            S+ +IV V ++   N   P+F+   Y+V++   + ++  +     S   +G
Sbjct: 629 LSTTSIVRV-LMTDVNDNRPIFEPREYNVSLRAESPVSGPILRCVASDADAG 679



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +V   +LDR+  N  +++ ++ A +    G   S+ VS+ + + D NDNAPR P   PI 
Sbjct: 1357 LVVAHSLDRE--NISEYQLEIRALDTTSIGNPQSIAVSVRIEIEDANDNAPRWPQ-DPIV 1413

Query: 61   IQAGEAR---RQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKL 116
            ++  E       I  + ATD D G N E+ Y  +     TG   F +D  +G +     L
Sbjct: 1414 LKVSERALIGSSIYNLSATDLDDGPNGELRYGLVAEYPPTG--SFAVDSLTGALTLAKPL 1471

Query: 117  IAGE--QYSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVF 155
               E  +Y++ ++A D    + +    V+V   V   N   PVF
Sbjct: 1472 DREERSEYTLVLKAEDRAPAAERLASTVTVRVLVLDQNDNDPVF 1515



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 15/186 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA----GEARRQ-IVK 72
            +F   ++A+            L V ++D+NDNAP   +    Q  A    G A+   +VK
Sbjct: 2171 RFVLTLVAKTVGPDPLEAYAKLVVRISDVNDNAP---IFTQSQYSATVLEGNAKGDFVVK 2227

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG--EQYSITVQAT 129
            + A+D D G+N+ + Y I  V     + F I+ P SG++ T   L     E+Y +T+ AT
Sbjct: 2228 LSASDMDQGLNSRLLYHI--VDGNPDNAFTINPPYSGIVRTNIVLDREIREKYRLTIIAT 2285

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
            D G         +SV V   N   P F +    ++V EG +  S +  IT + + S  A+
Sbjct: 2286 DQGNPQLTGTAALSVRVIDINDNQPTFPEPKI-ISVHEGTAPGSVLTAITANDVDSSPAL 2344

Query: 189  MNKEEN 194
              +  N
Sbjct: 2345 TYRFSN 2350



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 17/159 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAG 64
            LDR+     ++   V+AR  +    +   +L + + D NDN+P    +P     + +   
Sbjct: 1679 LDRE--KTSRYSVPVLARSSKLLDLA---TLEIFVLDENDNSPEF--VPGSCYTLAVPEN 1731

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +    +  + ATD D G N EI+YSI  +S     KF++D  +GV+ + G L   A  +Y
Sbjct: 1732 QENAVVHTLAATDADEGKNGEISYSI--ISGNIGSKFKLDAVTGVL-SAGSLDREAVPKY 1788

Query: 123  SITVQATDTGGKSSQTIVEVS-VVPGPNTRSPVFQQNTY 160
             +TV A D G  S +    ++ VV   N  +P F  N Y
Sbjct: 1789 VLTVSAKDKGRPSLEARCNLTVVVLDVNDNAPSFLHNQY 1827



 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)

Query: 18   KFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIVK 72
            ++  ++ A+++  T  S+    PV++ +N++D+NDN PR L  +  + I+        V 
Sbjct: 2574 RYVIRLGAKDENSTTGSLVGDDPVTVIINVDDVNDNYPRFLEELHQVSIKEDAPLGHTVA 2633

Query: 73   I-EATDNDLGVN--AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
            +  A D DL  +  A I Y I   ++  L  FR+D  SG +     L   +  E Y + V
Sbjct: 2634 VLRAKDEDLAGSPAASIVYDITSGNDAAL--FRVDESSGAVLVNASLDCDLGPEVYQLVV 2691

Query: 127  QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
             A D+   + +      +   +   N  SP F  + Y   V E     +TV     S L 
Sbjct: 2692 MACDSEPPAGRLCALARLRVRLEDVNDNSPKFPVSEYLEFVGENEPAGTTVFAARASDLD 2751

Query: 184  SG 185
             G
Sbjct: 2752 RG 2753



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 17/148 (11%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQ 62
            + +E LDR       +   V+A +    AA+   S+ V + D NDN PR    +   ++ 
Sbjct: 1047 LDRETLDR-------YSLTVLATDNGSPAATASASILVTVLDDNDNEPRFEKDLYAFELL 1099

Query: 63   AGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                   +V  + A+D DLG NA + Y++   +++    F +DP +G I T   L    +
Sbjct: 1100 ENLPSGMLVGTVSASDTDLGKNALLRYAVVQANSS----FAVDPDTGEITTREPLDRESK 1155

Query: 122  --YSITVQATDTG--GKSSQTIVEVSVV 145
              + + ++A D G   ++++  + VSV+
Sbjct: 1156 AVHELVLEARDQGTPSRAARVPLRVSVL 1183


>gi|297676176|ref|XP_002816020.1| PREDICTED: protocadherin alpha-2 [Pongo abelii]
          Length = 809

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 25/115 (21%)

Query: 19  FRFQVIAREKQGTAASVP-----VSLTVNLNDINDNA-----PR-------LPMIPPIQI 61
            +FQV AR+     A VP     V+L V + D NDNA     PR       +  + P  +
Sbjct: 532 LQFQVRARD-----AGVPPLGSNVTLQVFVLDENDNALALLAPRAGTAAGAVSELVPWSV 586

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            AG     + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 587 GAGHV---VAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 638



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPVFPMTVRTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
          Length = 4375

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 21/193 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  +V+A + +  A +    + + + DINDN+P    I    
Sbjct: 2965 WTISSKKPLDRE--DTEKYLLKVMASDGKFQAIT---EVEIFVLDINDNSPECGQI---- 3015

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
               G           I+KI ATD D+G NA+ITYS++     G  +FR+ P +G + T+ 
Sbjct: 3016 FYTGRVSEGALPGLFILKISATDPDVGSNAQITYSLH---GPGAEEFRLGPHTGELTTSA 3072

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  Y +  +ATD GG+S Q  + + +V   N  +P F  +   V V +  +  +
Sbjct: 3073 PLDREQKPMYHLVAKATDGGGRSCQADITL-IVEDTNDNAPRFFPSHCAVAVFDNTTTKT 3131

Query: 173  TVATITVSRLASG 185
             +A +    L  G
Sbjct: 3132 PIAVVAARDLDEG 3144



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 14/162 (8%)

Query: 28   KQGTAASVPVSLTV-NLNDINDNAPRL---PMIPPIQIQA--GEARRQIVKIEATDNDLG 81
            ++G+A+   V++ V N+ DIND+AP     P    I+  A  GE    I+ + A D D  
Sbjct: 3298 RKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEI---ILTVSADDLDGA 3354

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTI 139
            +N +ITYSI  V    L  F I P+SG I     L   E   YS+TV+ATD G  +  + 
Sbjct: 3355 MNNQITYSI--VEGNPLGHFAIQPKSGQISIAKHLDREEIPSYSLTVRATDNGHPAQFSD 3412

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V + + V   N   P F Q  Y V V E A + ++V  + +S
Sbjct: 3413 VALHIHVSDVNDNPPRFFQLNYSVVVQENAPVGTSVLELIMS 3454



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++  V+A    Q T     VS+ +++ D+NDN P     P     ++   +   ++++ A
Sbjct: 2764 YQIDVMAHCSHQETELVSLVSVNIHVQDVNDNRPVFEADPYKAFVMENMPSGTTVIQVTA 2823

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
             D D G + ++TYS+   S      F ID  SG I T  +L   A E Y   V ATD G 
Sbjct: 2824 NDQDTGNDGQVTYSLEAESGNLRGLFTIDGESGWITTLKELDCEAQEIYRFYVVATDHGR 2883

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            K   SSQT+VEV+ V   N  +P F  + Y  +V E A     V T++
Sbjct: 2884 KVQLSSQTLVEVT-VSDENDNAPQFTSDFYKGSVIENAEPGQVVVTLS 2930



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + + + D ND+ P  P    M+   +  A E    + ++ A+D D G N+ ITY+I    
Sbjct: 1231 VVIQVLDANDSPPTFPHKLFMVQLPERDASETPLPVYRLIASDRDQGQNSHITYTIEE-E 1289

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV--PGPNT 150
            + G+  F I+P +G++ +     A E   +TV+ATD G    SS   + +S V  P P++
Sbjct: 1290 DEGI--FTINPTTGMVFSRKAFPASEYNILTVKATDGGSPPLSSHVRLHISWVTRPSPSS 1347

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITV 179
                F +  ++  V E   +N  V  I++
Sbjct: 1348 EPLAFDEPHFNFAVMETDPVNHMVGVISI 1376



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 15/177 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR 67
            LDR+     K  + ++A+   G   S    +T+ + D NDNAPR  P    + +      
Sbjct: 3074 LDRE----QKPMYHLVAKATDGGGRSCQADITLIVEDTNDNAPRFFPSHCAVAVFDNTTT 3129

Query: 68   RQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  I  + A D D G NAE+ YS+   S++    F I+  +GVI     L   +   + +
Sbjct: 3130 KTPIAVVAARDLDEGPNAEVVYSL---SDSANGHFSIEETTGVIRLEKPLKDSQHSAFEL 3186

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            TV+ATD G     S+   V VSVV   N   PVF    Y   V E  ++ + V  ++
Sbjct: 3187 TVRATDRGTPEPLSALGTVTVSVV-DLNEYLPVFLAPEYMAMVKEDVAVGTEVLNLS 3242



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P+   +P    +Q G E    + ++ ATD D+G N  ITYS      
Sbjct: 2056 TVKVYVEDVNDNPPQFENVPYYTSVQDGTEPGDVLFQVSATDKDIGDNGAITYSFAE--- 2112

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 F IDP  G I     L   A  +Y++ V A D G        EV V+   N  +P
Sbjct: 2113 -DYKYFWIDPYLGDISLKKPLDYQALNKYNLRVIAKDKGEPPLHAEEEV-VISVRNKSNP 2170

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            +FQ   Y V V E   + +++  I
Sbjct: 2171 LFQSLYYRVKVPENIPLYTSILHI 2194



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            +I+++ A D D G NAEI YS+   +  G   F ID  SG+I    KL     E++++ V
Sbjct: 1574 EIMQVRALDQDQGANAEIHYSLQAGNGEGF--FSIDLYSGIITVAQKLDPSRQERFTLIV 1631

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            +A D G    +    V V   P+ R+ P F +  Y   +SE  ++ S +  ++ + L+
Sbjct: 1632 KAEDQGFPQLKDSATVHVRIRPSDRTPPKFPEAEYITEISESIAVGSPLIQVSATSLS 1689



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 7/143 (4%)

Query: 41   VNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN P    MI    + ++  A+  +V++ A+D D G N  ++Y I    +   
Sbjct: 2261 VEVEDVNDNPPVFSQMIYTASVSESLPAQTPVVQLFASDKDSGRNKAVSYQILDDGSDAT 2320

Query: 99   HKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPV 154
              F ID  +G I T   L     +Q+ + V+ATD G    SS  +V V V    N   P 
Sbjct: 2321 KFFNIDGSTGQITTAQALDYERNQQFRMKVRATDHGMPPLSSDALVIVDVT-DINDNPPE 2379

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F Q  Y+  VSE A+    V  +
Sbjct: 2380 FSQLQYEAKVSEMATCGHIVIKV 2402



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 16/165 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVK 72
            +FR +V A +      S    + V++ DINDN P    +   Q +A           ++K
Sbjct: 2345 QFRMKVRATDHGMPPLSSDALVIVDVTDINDNPPEFSQL---QYEAKVSEMATCGHIVIK 2401

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++A D D G    + Y I  +S      F I+  SG+I    +     +  Y++ V A+D
Sbjct: 2402 VQALDPDSGDTTRLEYVI--LSGNDNRHFTINSTSGIISMFNRCKKDLESFYNLRVSASD 2459

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               KS+   V V +     N  SP F+QN Y+  ++E A I + V
Sbjct: 2460 GVFKST---VPVYINTTNANKYSPSFRQNVYEAELAENAEIGTKV 2501



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 24/183 (13%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQ 69
            RD P  G   F V               LTV L D+NDN P+ LP +  +++        
Sbjct: 898  RDQPKTGYELFSV-------------TDLTVTLEDVNDNTPQCLPALNNVKVPEDLPVGT 944

Query: 70   IVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            I+  +E  D D G   E+ YS+  +S+  +  F +D  +G +    +L     + Y++TV
Sbjct: 945  ILLFLEVFDPDTGSGGEVRYSL--ISDEEM-MFHMDKLTGALRLEKELDYEKKDSYNLTV 1001

Query: 127  QATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            Q +D G    +SS   +EV+++    N   P F    +   V E +   ++V  +T   +
Sbjct: 1002 QVSDGGKPFSRSSLCHLEVNILDVNENLHPPRFASFVFKGWVQENSPEGTSVMMVTAKDI 1061

Query: 183  ASG 185
              G
Sbjct: 1062 DKG 1064



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 26/153 (16%)

Query: 41  VNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           +++ D N++AP              +PP           ++ ++ATD D G N  +TY+I
Sbjct: 449 IDITDCNNHAPSFSQSSYRGAFDENVPP--------GTSVLTVQATDEDEGNNGFVTYTI 500

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK-SSQTIVEVSV-V 145
              +N     F IDP SG+I T+  +   +    Y + V A+D G     +T V VS+ +
Sbjct: 501 ---ANQKSVPFVIDPYSGIISTSKSMDYELMQRWYHLRVWASDWGSPFRHETEVYVSLML 557

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N  +PVF++ +    +     + + VAT++
Sbjct: 558 SNVNDNAPVFEKASCSGTIPRDFPVGNPVATVS 590



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2538 ITTLQKLDRENSTERVIAIKVMAKDGGGKVAFCTVKII--LTDENDNPPQFKASEYTLSI 2595

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++ YS+  V +       I+  +GV++    L+  E
Sbjct: 2596 QSNVSKGSPVIQVLAYDADEGANADVIYSVDSVEDVAEDLVEINAATGVVKVKESLVGLE 2655

Query: 121  Q--YSITVQATDTGGKSSQTIVEVS--VVPGPNTRSPVFQQNTYDVNVS----EGASINS 172
               ++  V+A D+      ++V V+  +VP   T  P F +  Y  + S    EG+ I S
Sbjct: 2656 NRAFNFKVKAEDSRPPHWNSLVPVNLQIVPREVTL-PRFSEPLYTFSASEDLPEGSEIGS 2714

Query: 173  TVAT----ITVSRLASGCAIMNKEE 193
              A     I  S +    A  NK+E
Sbjct: 2715 VRAFAEEPIIYSLVKGTTAESNKDE 2739



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            ++TV++ D+N+  P   + P       E      +++ + A   D   N EI Y I + +
Sbjct: 3204 TVTVSVVDLNEYLPVF-LAPEYMAMVKEDVAVGTEVLNLSALTRDNAENTEIKYEIVNGN 3262

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            + G  KF+++  +G +   G L   A  +Y ++++ T  G  S   +  V + +   N  
Sbjct: 3263 DHG--KFQLNSNTGALYINGSLDFEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDH 3320

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            +P F Q+ Y  ++ E A++   + T++   L
Sbjct: 3321 APEFIQDPYFADIREDAAVGEIILTVSADDL 3351



 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 12/161 (7%)

Query: 24  IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDL 80
           I  + QG       SL  NL+ IN NAP+     P  I   E       I  + A D D 
Sbjct: 689 IESQSQGHGQDDETSL--NLHLINHNAPKFDDSFPRSIDIIETVPINSTIADLSAVDPDT 746

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSS 136
           G N ++ Y I   ++     F ID   G+++    L     +    +ITV    T  KSS
Sbjct: 747 GFNGKLVYVISDGNDDSC--FTIDLELGLLQVLSPLDHERTSFYILNITVYDLGTPQKSS 804

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++ V+V+   N  +P F Q  Y V + E  +  +T+A +
Sbjct: 805 WKLLAVNVL-DTNDNTPKFPQGAYWVAIPEHVATGTTIAQL 844



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 11/147 (7%)

Query: 39   LTVNLNDINDNA--PRLPMI---PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            L VN+ D+N+N   PR         +Q  + E    ++ + A D D G + E+ Y  +  
Sbjct: 1018 LEVNILDVNENLHPPRFASFVFKGWVQENSPEGT-SVMMVTAKDIDKGKDGEVQY--FFR 1074

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
              TGL  F I+  +G I TTG L       Y +TV A D G     ++ E+ + V   N 
Sbjct: 1075 EGTGLSVFSIEKDTGTIRTTGPLDREGTSHYWLTVLALDLGTIPLSSVTEIYIEVTDTND 1134

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              P   +  +  +V E +  N++V  +
Sbjct: 1135 NPPQMSRPVFYTSVMENSPPNTSVLQL 1161



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPN 149
            V    L  F  D ++GV+  TG+L      +++ TV+ATDT  G  S+  VEV V    N
Sbjct: 2209 VEEDSLKLFSTDFKTGVLTVTGQLDYELETKHTFTVKATDTALGSFSEARVEVEV-EDVN 2267

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               PVF Q  Y  +VSE     + V  +  S   SG
Sbjct: 2268 DNPPVFSQMIYTASVSESLPAQTPVVQLFASDKDSG 2303



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 18  KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIV-K 72
           K  + +I +  + T A      + +++ D ND  P     PP   + I+     + +V  
Sbjct: 115 KDSYMLIIKATESTFAYEAWAKVLIHILDRNDLKPLFS--PPSYKVSIREDTPLKTVVCT 172

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + ATD D G NAE  Y++    NT    F + P +G + TTG+L
Sbjct: 173 LSATDADAGQNAEFYYAL----NTKSDLFTVHPTTGAVMTTGRL 212


>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Apis florea]
          Length = 4483

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   V+A +      S   S+ VN+ D N+NAPR      + P+    G  +R +  +  
Sbjct: 2448 YSLTVVATDNGKPPLSSKTSIHVNVVDANNNAPRFEQRSYLYPVPENYGVGKRVVQLVAR 2507

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTG 132
             D D GVNAEI+Y + +V+  G   F ID +SG +     L     G  + + V+A D G
Sbjct: 2508 DDADFGVNAEISYFLVNVN--GSEYFSIDEKSGWVYIQNALANVRVGTTFLLKVRAIDKG 2565

Query: 133  GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                +  V ++ V+ G N  +P F   ++ V V E   +N+T+ T++ +
Sbjct: 2566 VPPQKDEVSLTLVISGENKHAPTFAAVSHQVRVPENEPVNTTILTVSAT 2614



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
           K+   V+A +K     S    L +++ND+ND+ P         +  +       +  I A
Sbjct: 470 KYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISA 529

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG-- 133
           TD D G+NA I Y +   +  G   F ID  +G++ T   L    Q SI +  +   G  
Sbjct: 530 TDADSGLNARIYYELDSGNEQGW--FAIDQDTGLVTTIATLDREVQGSIELHVSARDGGP 587

Query: 134 --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             K + T ++V+++   N  +P F QN   V +SE     S VAT+T
Sbjct: 588 SPKYASTHLKVTIL-DENDEAPRFSQNVVQVTLSENTPPQSLVATLT 633



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 10/173 (5%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQ--IVKIEA 75
           V AR+           +TVNL D ND+ P +     P+ P        A +   +  I  
Sbjct: 363 VFARDHGSPRQDGRTYVTVNLLDANDHDPEIKFSYFPITPGYATVDENAVKDSIVAAITV 422

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG 133
            DND G+N E +  I   +  G  + +      V+   G L   E  +Y++TV ATD G 
Sbjct: 423 IDNDEGLNGETSVEIRAGNELGHFRLQTAATFDVVRVNGGLDREEIPKYNLTVVATDKGT 482

Query: 134 K-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S T   V  V   N   PVFQQ+ Y   +SE + I S VA+I+ +   SG
Sbjct: 483 PPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDADSG 535



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 16/183 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           + +K +LDR+     ++R  VIA+++     S   ++ + L D+NDN+P     R  M  
Sbjct: 670 LTTKVHLDRE--TIAEYRILVIAKDQGTPPQSSTATVILTLKDVNDNSPVFYPWRYLMAV 727

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +   + K+ ATD D   NA++ YS+    + G   F +D R+G I   G L 
Sbjct: 728 PEDAPPGTS---VGKVMATDADARENAQVRYSL---ESGGEGLFAVDERTGEITLQGSLR 781

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ-QNTYDVNVSEGASINSTV 174
           A  +  Y + + A DTG + +     V ++   +     F   N Y+  ++E      TV
Sbjct: 782 AAHKTLYELNISAKDTGDRFAVRNALVEIIREEDLERLEFDTYNGYEFRIAEDRGECGTV 841

Query: 175 ATI 177
           A +
Sbjct: 842 ANM 844



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 11/148 (7%)

Query: 37   VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V+LT+ + D+NDNAPR   P        A ++   +   +A D+D G N+ I   +Y + 
Sbjct: 1943 VNLTIFVKDVNDNAPRFSSPRYTAYVPGATKSGDFVFGAKAVDDDDGENSRI---VYRLQ 1999

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPG-----P 148
                 KF ID  SGVI  T +L   E  Y + +QA+D G K      ++ +        P
Sbjct: 2000 GIDAEKFVIDSNSGVIRATQELANDETTYQLQIQASDCGVKPQSVTADLVIHLWERQLFP 2059

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVAT 176
            + RS V  + T   +V EG  +    AT
Sbjct: 2060 SFRSSVTTRFTLPEDVPEGRVVTKLGAT 2087



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 27/181 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----------IPPIQIQAGEAR 67
            +   V  R+    A    V L VN+ D NDNAP +              PP+ +      
Sbjct: 2133 YEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPVMEAAIYNATVPEEEYPPLFVS----- 2187

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
                K+ A D D G N +++Y   ++ N     F ID  +G I T  KL   E   Y + 
Sbjct: 2188 ----KVSAKDRDSGENGQVSY---YLVNDFTETFIIDSDNGEISTNAKLDREEIASYELI 2240

Query: 126  VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V+A D G  S + T   +  V   N   P F +  + VNV+E A I + V  IT S L  
Sbjct: 2241 VEARDEGQPSLTGTATVLVTVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSDLDI 2299

Query: 185  G 185
            G
Sbjct: 2300 G 2300



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P+   +P  +Q+  G A   Q++++  TD D G+N ++ YS+   +
Sbjct: 1205 VKVVIYITDVNDNIPQFQRLPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGN 1264

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
              G  +F ID  +G I    +L     + Y +TV A D    + + I+    V   N  +
Sbjct: 1265 QYG--RFAIDEATGQISLMKELDRETMDTYVLTVVAHDL--LTHRDIILNIQVTDTNDNA 1320

Query: 153  PVFQQNTYDVNVSE----GASINSTVAT 176
            P FQ   Y  +V E    G+ I   VAT
Sbjct: 1321 PTFQNTAYSFDVPENMPRGSRIGQVVAT 1348



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSIT 125
            +++    A D D  VNA I YS+ H  N G  +FR+   SG+I     + A  G    + 
Sbjct: 921  QEVCLARARDRDASVNARIVYSLTH--NPG-EQFRVAENSGIIYLDKPIRAAPGTVLHLE 977

Query: 126  VQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            V ATD+G    S+Q  V V+ V   N  +PVF+  +Y+ ++ E   +N    ++T + + 
Sbjct: 978  VTATDSGNPPLSAQHQVRVT-VEDVNDHTPVFKLTSYETSLPESTPVNDRFFSLTATDVD 1036

Query: 184  SG 185
             G
Sbjct: 1037 LG 1038



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V +TV L D+ND +P    I P +I   E   +   ++ I+A D D G N  + YS+   
Sbjct: 1520 VQVTVVLLDVNDMSPEF--ISPTKISIIENAPSNTVVMAIKAVDRDEGRNGYVEYSL--- 1574

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP-GPNT 150
             +T L  F + P  G++  +G L       Y++ V A D G     +   V+V     N 
Sbjct: 1575 EDTTL-PFTVGPVDGLLRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTTVTVTVLDKND 1633

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             SPVF    Y   V+E ASI ++V  ++
Sbjct: 1634 NSPVFDPRQYSATVAENASIGASVLQVS 1661



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  +F   V++ +      + P+ + + + DINDN P  P    I +   E+  
Sbjct: 124 LDREALSSDRFDLVVLSSQ-----PTYPIEVRILVLDINDNDPEFPE-SSIAVSFSESAV 177

Query: 68  --RQIVKIEATDNDLGVNAEIT-YSIYHVSNTGLHKFRID----PRSGV----IETTGKL 116
              +++   ATD D   N  +  Y I   +  G  KFR++    P        +ETTGKL
Sbjct: 178 VGTKLLLDAATDKDTLENGVVDDYFIVDGNTDG--KFRLEVTGNPTGETTYLHLETTGKL 235

Query: 117 IAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                E YS+ V A D G   +    +V V+V+   N   P+FQQ+ Y V ++E A I +
Sbjct: 236 DREQVEFYSLNVCARDRGQPPRLGYLLVNVTVL-DVNDNPPIFQQSDYVVALNESAPIGT 294

Query: 173 TVATI 177
            V T+
Sbjct: 295 KVLTV 299



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 19/192 (9%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG 64
            K  LDR+  +   +  +V A ++   + S  V + V++ D NDNAP       I  ++  
Sbjct: 1067 KNVLDREEQD--YYALEVTATDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFILHLREN 1124

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
            E     V K+ ATD D+G NA++ +S+          F +DPR+G I++           
Sbjct: 1125 EPPDTFVGKLLATDRDVGRNADLVFSL----PASQQDFTVDPRNGFIKSLRAFDRELLVT 1180

Query: 118  -AGEQYSITVQA--TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              G  Y IT++A  TD G    +  V+V + +   N   P FQ+  Y V V+EGA+I + 
Sbjct: 1181 NTGSSY-ITLEATVTDNGVNRLRDRVKVVIYITDVNDNIPQFQRLPYRVQVNEGAAIGTQ 1239

Query: 174  VATITVSRLASG 185
            +  +  +    G
Sbjct: 1240 LLRVYTTDADEG 1251



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 78/193 (40%), Gaps = 18/193 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV +   LDR+    G     V AR+   +       L V + D ND APR      +Q+
Sbjct: 561 LVTTIATLDREVQ--GSIELHVSARDGGPSPKYASTHLKVTILDENDEAPRFSQ-NVVQV 617

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKL- 116
              E    +  +  + A DND G N  + YS +  V       F +D  +G + T   L 
Sbjct: 618 TLSENTPPQSLVATLTAVDNDQGTNGSVAYSFHSSVPRDYPKTFALDGLTGQLTTKVHLD 677

Query: 117 ---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GA 168
              IA  +Y I V A D G    S T   +  +   N  SPVF    Y + V E    G 
Sbjct: 678 RETIA--EYRILVIAKDQGTPPQSSTATVILTLKDVNDNSPVFYPWRYLMAVPEDAPPGT 735

Query: 169 SINSTVATITVSR 181
           S+   +AT   +R
Sbjct: 736 SVGKVMATDADAR 748



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   V AR++   + +   ++ V + D NDN P+   +  + + +  E  
Sbjct: 2229 LDRE--EIASYELIVEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRLFSVNVTENAEIG 2286

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              +++I ++D D+G NA ++Y      N G  KF +D  SG +   G L   EQ  Y + 
Sbjct: 2287 TFVIRITSSDLDIGQNANVSYRF--TENPG-QKFAMDALSGNVTVNGHLDREEQDEYLLK 2343

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + A D G   + T + ++ +   N   P F + +Y  +  E
Sbjct: 2344 LVAAD-GAWQAATALTIT-IQDQNDNPPEFDEESYHFHFPE 2382



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 9/172 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F  +V A +K        VSLT+ ++  N +AP    +   Q++  E       I+ + A
Sbjct: 2555 FLLKVRAIDKGVPPQKDEVSLTLVISGENKHAPTFAAVSH-QVRVPENEPVNTTILTVSA 2613

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG 133
            TD D G N  I Y I   +    ++F +   +G +     L     ++Y + + ATD G 
Sbjct: 2614 TDGDDGPNGMIRYKI--SAGNEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITATDLGF 2671

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            ++ Q +  ++V V   N   P F Q+ Y+  + E +  +S V  +    + S
Sbjct: 2672 EAKQAVAILTVNVSDINDNPPTFNQSVYEAYLPENSPPDSFVYKVIAKDIDS 2723



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 12/148 (8%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V +  +N+  P+   P+      ++ E    +  ++ATD D G +  + Y     SN
Sbjct: 2785 TVLVRVTGVNEYYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDAGEDGRVYYLFVGSSN 2844

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG----KSSQTIVEVSVVPGPN 149
                 F I   +G+I  + +L    Q  +  TV   + GG     + +  V VS+  G +
Sbjct: 2845 D--RGFSIGSETGIIRVSRRLDRETQNRVVLTVMTKNGGGIRGNDTDEAQVIVSIQDGND 2902

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F Q+ YD  VSEGA   + V T+
Sbjct: 2903 --PPEFLQSAYDATVSEGAVHGTRVLTV 2928



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 8/174 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            +++  + A +    A      LTVN++DINDN P     +      +       + K+ A
Sbjct: 2659 EYKLNITATDLGFEAKQAVAILTVNVSDINDNPPTFNQSVYEAYLPENSPPDSFVYKVIA 2718

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
             D D    A I Y I  +  TG   FRI   +G I +       E    T+        S
Sbjct: 2719 KDIDSPKYAVIEYKI--LGGTGKDHFRIREDTGEITSLISFDYEEANEYTLDIVAANPDS 2776

Query: 136  SQTIVEVSV----VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  +V  +     V G N   P F Q  + ++VSE A + ++V  +  +   +G
Sbjct: 2777 NPQMVGFTTVLVRVTGVNEYYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDAG 2830


>gi|363738275|ref|XP_425119.3| PREDICTED: neural-cadherin-like [Gallus gallus]
          Length = 2503

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 23  VIAREKQGTAASVPVS----LTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEAT 76
            + R +    A+VP++    + +N+ D+NDN P     I    +  G      ++++ AT
Sbjct: 696 FLLRVRAQNVAAVPLAAFTTIYINITDVNDNVPFFTSSIYEASVTEGAGIGTFVIQVSAT 755

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---- 130
           D DLG N EITYS+ H        FR+D ++G I TT      ++  Y + V++ D    
Sbjct: 756 DLDLGQNGEITYSLLHDHGGDYTCFRLDSQTGSIYTTSVFDREKKGSYLLEVESVDGSES 815

Query: 131 -----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                 G  +S T      +   N   PVF Q+ Y+VNV E   + ST+ T++
Sbjct: 816 ARPGKHGRPNSDTAYVRVFITDVNDNKPVFTQSVYEVNVVEDQDVGSTIITVS 868



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
            + + + LDR+      +RF V+A ++ G   +    + +N+ DINDNAP    +P     
Sbjct: 1006 IYAHKMLDRE--ERALWRFVVLATDEGGEGLTGFADVIINVWDINDNAPVFTCMPDDCNG 1063

Query: 61   --IQAGEARRQIVKIEATDND---LGVNAEITYSIY-HVSNT-GLHKFRIDPRSGVIETT 113
               +   A   ++++ A D D   +G+NA +TY I  +V N  G   F I+P +G I   
Sbjct: 1064 SVFENSPADTLVMEMSAVDRDDPNVGLNAVLTYRITENVKNEFGSDMFNINPNTGTIHVA 1123

Query: 114  GKLIAGEQYSI---TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G +I  E+ +I   TV+A D GG +      + +    N   P F +  +   + E ++I
Sbjct: 1124 GGVIDRERTAILFLTVEARDGGGLTGTGTATIWIA-DVNDHVPNFTKEMWQAAIPENSAI 1182

Query: 171  NSTVATITVSRLASG 185
            NS +  ++ +    G
Sbjct: 1183 NSEILRVSATDADGG 1197



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 15/161 (9%)

Query: 32  AASVPVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDL 80
           A+  P SLT      V ++D+N+N P        +  A     Q     ++++EATD D 
Sbjct: 382 ASGGPHSLTSTAQVIVKIDDVNNNKPVFQKCHYYREHASVLENQPSGTVVLQVEATDADE 441

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT 138
           G N  + Y + H     L  F I P +GV+ T       +Q  Y +TV ATD   +    
Sbjct: 442 GANGIVKYGLMHRDGV-LPAFSIHPDTGVLTTVQVFDREKQREYPVTVTATDQAAEPLIG 500

Query: 139 IVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           I +++VV    N   P F+   Y+  + E   + ++   +T
Sbjct: 501 ICQINVVILDQNDNDPRFENTHYEYFLREDTRVGTSFLRVT 541



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 25/174 (14%)

Query: 22  QVIAREKQGTAASVPVSLT----------------VNLNDINDNAPRLPMIPPIQIQAGE 65
           QV  REKQ      PV++T                V + D NDN PR            +
Sbjct: 474 QVFDREKQ---REYPVTVTATDQAAEPLIGICQINVVILDQNDNDPRFENTHYEYFLRED 530

Query: 66  AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
            R     +++ A D+D   NA ITYSI   +N      +I+P SG I     +       
Sbjct: 531 TRVGTSFLRVTAHDDDYSSNAVITYSI---ANEETDYLQINPTSGWIFVNQPISQRSSII 587

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + ATD G +SS+  + V+V    N + P +++++Y+V + E  + +++V  I
Sbjct: 588 GDIIATDGGNRSSKVELVVTVTSAKN-QPPQWERDSYEVVIPENTTRDASVLRI 640



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 8/137 (5%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
           K G   S    + V + D+NDN P     +     ++  +    I+ + A D D G NA+
Sbjct: 820 KHGRPNSDTAYVRVFITDVNDNKPVFTQSVYEVNVVEDQDVGSTIITVSANDEDEGTNAK 879

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS 143
           + Y I    NTG     + P +G I     L   E   Y I + A+D  GK     V + 
Sbjct: 880 LRYQIT-AGNTG-GVLGVQPETGAIFIAQPLDYEETKMYEIHLLASD--GKWEDYAVTII 935

Query: 144 VVPGPNTRSPVFQQNTY 160
            V   N  SPVF  N Y
Sbjct: 936 NVMNKNDESPVFSINEY 952



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 22/171 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +   + LD + PN   + F ++A +K     +   ++ ++++++ND AP           
Sbjct: 253 IFPAKELDYERPN-HLYEFIIMAVDKGEDPKTGTATVRIHISNVNDEAPEFSQAIYRSFV 311

Query: 63  AGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK---LI 117
           + +A     +  + A D D      +TY I   +  G   F +DP+ G+I         +
Sbjct: 312 SEDAGPNTLVATVSALDPD---GDGVTYDIPSGNQKG--NFVVDPKKGLIRLRSSPFPKL 366

Query: 118 AGEQYSITVQATD---TGGKSS-----QTIVEVSVVPGPNTRSPVFQQNTY 160
            G +Y + V ATD   +GG  S     Q IV++  V   N   PVFQ+  Y
Sbjct: 367 QGTEYVLNVTATDDNASGGPHSLTSTAQVIVKIDDV---NNNKPVFQKCHY 414



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 12/133 (9%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP----RLPMIPPIQI 61
            K+ LD +  +  +F   +   +   ++ +V +   + + D ND++P    +L    PI  
Sbjct: 1231 KKQLDFEKAHERQFNLTIKVEDLDFSSTAVCL---IEVEDSNDHSPVFHSQLIQTSPI-F 1286

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-- 119
            +       +  + ATD D G+N  I YSI   S+  + +F ID    VI    KL     
Sbjct: 1287 ENMPVGTTVTTVRATDKDSGLNGNIIYSIKSDSDP-MRQFVIDQHGHVI-VANKLDREVI 1344

Query: 120  EQYSITVQATDTG 132
            ++YS+ VQA+D G
Sbjct: 1345 QKYSLIVQASDQG 1357



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 16/169 (9%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIE 74
           + ++ ++ R ++    S    + V + D+ND AP        ++   E       ++++ 
Sbjct: 165 QHQYLLLVRAEENEQFSSATEVLVVITDVNDCAPEFHQSIYSKVSVPETVTMTTALLQVT 224

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATD 130
           ATD D   NAEI Y  Y +S      F I     +     K +  E+    Y   + A D
Sbjct: 225 ATDCDSKENAEILY--YTLSP----DFSITSHGTIF--PAKELDYERPNHLYEFIIMAVD 276

Query: 131 TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            G         V + +   N  +P F Q  Y   VSE A  N+ VAT++
Sbjct: 277 KGEDPKTGTATVRIHISNVNDEAPEFSQAIYRSFVSEDAGPNTLVATVS 325


>gi|149640350|ref|XP_001507181.1| PREDICTED: protocadherin beta-1-like [Ornithorhynchus anatinus]
          Length = 806

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
           K GTA      + + + D+NDN P+   ++  +Q+ ++  A   +  + ATD D  VN E
Sbjct: 222 KSGTA-----QIRIVVLDVNDNVPQFSRLVYRVQVLESSPAGSSVAIVSATDLDAEVNGE 276

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           ITYS+       +  F+IDP +GV++  G L   A E Y I VQATD GG S+ + V V 
Sbjct: 277 ITYSLAENPEAVMKTFQIDPATGVVQLRGPLDFEAVENYDIDVQATDGGGLSAHSKVLVE 336

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           VV   N  +PV    +    + E +S  + VA  +V
Sbjct: 337 VV-DVNDNAPVVTVTSVYSPIPEDSSRETVVALFSV 371


>gi|426330697|ref|XP_004026343.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2, partial
           [Gorilla gorilla gorilla]
          Length = 2911

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 229 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 281

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 282 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 341

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 342 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 401

Query: 170 INSTVATITVS 180
             S V  +T S
Sbjct: 402 PGSPVLRVTAS 412



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 769 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 820

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 821 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 879

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 880 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 934



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 564 YSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 622

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 623 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 673

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 674 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 730



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 686 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 740

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 741 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 799

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 800 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 833



 Score = 39.3 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 368 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGSPVLRVTASDRDKGSNALVHYSI 426

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVV 145
             +S     +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+
Sbjct: 427 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL 484

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              N  +P+F    +   V E   +   V
Sbjct: 485 -DINDNAPIFVSTPFQATVLESVPLGYLV 512



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 860 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 917

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 918 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 975

Query: 120 E--QYSITVQATDTGGKSSQTI 139
           +  +Y + +QAT     S  T+
Sbjct: 976 DRPEYVLVIQATSAPLVSRATV 997


>gi|345308451|ref|XP_003428695.1| PREDICTED: protocadherin Fat 4-like, partial [Ornithorhynchus
           anatinus]
          Length = 563

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 7/149 (4%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATDNDL 80
           V+A +K G A S    + V + D+NDN P        ++++ G  A   ++++ A+D D 
Sbjct: 150 VVATDKGGPALSASAEVRVVVLDVNDNDPVFSRGAYEVEVEEGALAGTDLLRVSASDADE 209

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQT 138
           G N E+ Y++  V+     +FR+D  +GV+   G L   E  +Y +TVQA+D GG     
Sbjct: 210 GPNGEVRYAL--VAGAADREFRLDSVTGVLSVGGPLDREEKAEYRLTVQASDRGGSPRTA 267

Query: 139 IVEVSVVPGP-NTRSPVFQQNTYDVNVSE 166
              V+V+ G  N  +PVF  + Y ++V E
Sbjct: 268 TALVAVLLGDVNDFAPVFDPSPYSLDVPE 296



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++V L D+NDN PR   + P      E   A   + + EATD D G N+ + YS+   + 
Sbjct: 63  VSVVLLDVNDNPPRF--VSPNLTYVPENTPADTVVFRAEATDADSGPNSYVEYSL---AG 117

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVV-PGPNTRS 152
            G   FR+    G +   G L   E  + ++TV ATD GG +     EV VV    N   
Sbjct: 118 EGAPAFRVGTVDGEVRLVGPLDREEAAELAVTVVATDKGGPALSASAEVRVVVLDVNDND 177

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PVF +  Y+V V EGA   + +  ++ S
Sbjct: 178 PVFSRGAYEVEVEEGALAGTDLLRVSAS 205



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 23/141 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGE 65
           LDR+     ++R  V A ++ G+  +    + V L D+ND AP     P    +     +
Sbjct: 243 LDRE--EKAEYRLTVQASDRGGSPRTATALVAVLLGDVNDFAPVFDPSPYSLDVPENGRD 300

Query: 66  ARRQIVKIEATDNDLGVNAEITYSI--------YHVSNTGLHKFRIDPRSGVIETTGKLI 117
           + R ++++ A D+D GVN+++TYS+        + +S++G  + R+  RS   ET  + +
Sbjct: 301 SPRTVLQVVARDDDQGVNSQLTYSLAGGNEDTAFTLSSSG--ELRL-VRSLDRETKDRFV 357

Query: 118 AGEQYSITVQATDTGGKSSQT 138
                 + V ATD GGK+ ++
Sbjct: 358 ------LIVTATD-GGKTCES 371


>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
            domestica]
          Length = 4351

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 19/184 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + + +K+ LDR+  +  K+  +V A + +   AS PV + V   DINDN+P+   I    
Sbjct: 2960 WKITTKKTLDRE--HIAKYLLKVTASDGK-FQASTPVEVFVL--DINDNSPQCTKILYSS 3014

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G     I+++ ATD D GVNA +TYS++     G  +F++DP +G + T   
Sbjct: 3015 KVPEDVLPGHF---ILQVTATDLDTGVNALVTYSLH---GPGADEFKLDPYTGELTTLML 3068

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L   E+  Y +  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ + 
Sbjct: 3069 LDREEKDVYYLVAKATDGGGRSCQADVTIR-VEDVNDNAPRFFPSHCSVAVFDNTTVKTP 3127

Query: 174  VATI 177
            VA +
Sbjct: 3128 VAVV 3131



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 23/191 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ +   LDR+  N  +   +V  ++    +      + V + D+NDN+P         R
Sbjct: 1189 LLSTARQLDRE--NKAEHILEVAVQDNGKPSLQSTSRVVVRVLDVNDNSPTFSHKRFKIR 1246

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            LP     + Q     R + ++ A+D D G N +++YSI          F ID  +G++  
Sbjct: 1247 LP-----ERQDSSVPRPVYRLVASDRDEGPNGKVSYSI---EENYEEAFTIDAETGLVSA 1298

Query: 113  TGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT--RSPVFQQNTYDVNVSEGA 168
            +    AGE   +T+QA D+G   +SS   + +  +P PN   +  VF +  Y+ +  E  
Sbjct: 1299 SVNFPAGEYNILTIQAVDSGQPPRSSSVRLHIEWIPRPNPSGKLWVFDEPHYNFDAVETD 1358

Query: 169  SINSTVATITV 179
             +N  V  ++V
Sbjct: 1359 PVNHMVGMVSV 1369



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+ P       +V+AR+  G  A    S+   L D NDN P+       + +
Sbjct: 2532 IATLQKLDRENPTEKLMPIKVMARDGGGRVAFC--SVKTILTDENDNPPQFKASEYTVSV 2589

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++  +GV++    L+  E
Sbjct: 2590 QSNVSKGSPVIQVLAYDADEGANADVTYSVDSVEDLADEVIEVNSATGVVKVKESLVGLE 2649

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               ++  ++A D G     +++ V +   PN  + P F + +Y  +VSE     S V  +
Sbjct: 2650 NQAFNFKIKAQDGGPPHWDSLIPVRLQVVPNEVTLPKFSEPSYTFSVSEDLPEGSEVGLV 2709



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHV 93
            VS+ + + D+NDN P     P      +       ++++ A D D GVN E+TYS+    
Sbjct: 2777 VSVNIQVKDVNDNKPVFEADPYKAFLTENMPVGTTVIQVTANDQDTGVNGEVTYSLALEQ 2836

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             N     F I+  +G I T  +L     E YS  V A+D G     SS+ +VEV++    
Sbjct: 2837 GNAAAELFAINSENGWITTLRELDCEVQEMYSFYVVASDHGRTIQLSSKALVEVTIT-DE 2895

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E       VAT+
Sbjct: 2896 NDNAPQFASEVYRGSVIENGEPGEHVATL 2924



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLPMI--PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    +    +  +    +  ++++ A+D D G N +++Y I    +
Sbjct: 2252 TVEVQVEDINDNPPVFSQLVYSALVSEGLPPQTPVIQLLASDQDSGRNKDVSYWILEDDS 2311

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
                 F+ID  SG + TT +L     +Q+ + V+A D G    S++T+V V+ V   N  
Sbjct: 2312 EDSSFFQIDESSGEMSTTQELDYETQQQFYVKVRAVDNGVPPLSAETLVIVN-VSDVNDN 2370

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2371 PPAFRQPQYEANVSELATCGQLVIKV 2396



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITV 126
            +++++ A D D G N ++ YS+   ++  L  F IDP  G+I    K  L+  +QY +TV
Sbjct: 1568 ELLQVRALDADRGFNGQVQYSLQAGNSESL--FTIDPHLGIITVAQKLDLMQQDQYMLTV 1625

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATIT 178
            +A D G      +  V++   P+  S P+F    Y   + E  +I S +  ++
Sbjct: 1626 RAEDQGSPPLHDVATVTIHIHPSDYSAPIFSMAEYFAEIPESVAIGSPLLLVS 1678



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 9/141 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +++ D+NDN P    +P    IQ G E    + ++ A D D+G N  ITY+      
Sbjct: 2050 AVKISIEDVNDNPPEFRHLPYYTAIQDGTEPGDVLFQVSAIDLDIGANGAITYAF----A 2105

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 F IDP  G I         A  +Y++ V A D GG  S  + E  +V   N  +P
Sbjct: 2106 EDYMYFWIDPYLGDISLKKPFDYRALNKYTLRVIAQD-GGNPSLKVEENVLVTVRNKSNP 2164

Query: 154  VFQQNTYDVNVSEGASINSTV 174
            +FQ   Y V V E  ++ + +
Sbjct: 2165 LFQSLHYKVRVPENIALYTPI 2185



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+     K  + ++A+   G   S    +T+ + D+NDNAPR     P          
Sbjct: 3069 LDREE----KDVYYLVAKATDGGGRSCQADVTIRVEDVNDNAPRF---FPSHCSVAVFDN 3121

Query: 69   QIVK-----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
              VK     + A D D G+NA+++YS+  V +   H F I+  +GV+     L A +Q  
Sbjct: 3122 TTVKTPVAVVFARDPDEGINAQVSYSL--VGSADGH-FSIEATTGVVRLEKPLQAMQQEV 3178

Query: 122  YSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              + V+A+D G     S+   + VSVV   +   PVF    ++V V E A   + V  ++
Sbjct: 3179 LELIVRASDQGTPTPLSTLGTITVSVVDLADYL-PVFLNTEHNVQVPEDAQPGTEVLRLS 3237



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 11/117 (9%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            I+ + A D D  +N+ ITYS+  V+   L  F I P+ G ++    L   E   YS+T++
Sbjct: 3336 ILTVSAVDGDGPLNSAITYSL--VAGDQLGHFTIHPKKGELQIAKHLDWEETSSYSLTLR 3393

Query: 128  ATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ATD+G     + +   VEV+ V   N   P F Q  Y + V E A + S V  + +S
Sbjct: 3394 ATDSGQPVLYQDAVVNVEVADV---NDNPPRFFQLNYSIVVQENAPLGSRVLELVLS 3447



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPR-LPMIPPI 59
            VV   +LDR+  +  ++  +V AR+  K G       +L V L+D+NDN P+ +P +  +
Sbjct: 871  VVVTGSLDRE--SQPQYVLKVEARDQAKVGHQLFSITNLVVTLSDVNDNTPQCIPELSQV 928

Query: 60   QIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            ++        ++  +EA D DLG   E+ Y++    +     F +DP +G +    +L  
Sbjct: 929  KVPEDLPLGTVLTFLEAFDPDLGPGGEVKYTLV---DNAQGTFGLDPLTGALSLERELDF 985

Query: 119  GEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINS 172
             ++  Y++++ A+D G    + +   V+V+V+    N   P F    Y   V E +   +
Sbjct: 986  EKRTWYNLSLWASDGGKPMARGASCHVQVTVLDVNENLHPPRFASFVYQGQVEENSLPGT 1045

Query: 173  TVATIT 178
             V ++T
Sbjct: 1046 LVMSVT 1051



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 10/139 (7%)

Query: 41   VNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            VN++D+NDN P  R P       +     + ++K++A D D G    + Y I  +S    
Sbjct: 2362 VNVSDVNDNPPAFRQPQYEANVSELATCGQLVIKVQALDPDSGDTTRLEYLI--LSGNED 2419

Query: 99   HKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
              F I+  SG+I      +      Y + V A+D      +T V V +     N  SP F
Sbjct: 2420 RHFTINSTSGIISMFNFCRKHLDSAYLLRVAASD---GVFRTAVPVYINTTNANKYSPEF 2476

Query: 156  QQNTYDVNVSEGASINSTV 174
            +Q+ Y+V ++E A I + V
Sbjct: 2477 RQHIYEVELAENAEIGTKV 2495



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L    Q  +  TV+ATDT  G  S+  VEV  V   N   PV
Sbjct: 2208 LTLFTADFKTGVLTVTGPLDYESQTKHIFTVRATDTALGSFSEATVEVQ-VEDINDNPPV 2266

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y   VSEG    + V  +  S   SG
Sbjct: 2267 FSQLVYSALVSEGLPPQTPVIQLLASDQDSG 2297



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQYS---I 124
            ++++++ATD D G N  + Y+I    +    K F++DP SG + T GKL      S   +
Sbjct: 1461 ELLRVQATDQDKGKN--LVYTIQGSLDARSTKLFQLDPNSGSLVTVGKLDMDSGLSRHIL 1518

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            TV   D      +  V V++ +   N  SP F Q  Y+   S  A++ + +  +
Sbjct: 1519 TVMVRDQEIPIKRNFVWVTIQIEDRNLHSPSFIQLHYETTTSTIAALGTELLQV 1572



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 10/115 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSIT 125
           I+ + ATD D G N  +TYSI   ++     F IDP  GVI  T KL+  E     Y+  
Sbjct: 476 ILTVTATDQDHGENGFVTYSI---TSPRAVPFSIDPYLGVISIT-KLMDYELMQRLYTFR 531

Query: 126 VQATDTGGK-SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           V A+D G     ++ V +S+ +   N   P+F+       +     +  TV T++
Sbjct: 532 VWASDWGSPFHRESEVSISLMLNNLNDNQPMFENANCSGTIPWDLRVGETVVTLS 586


>gi|403256560|ref|XP_003920939.1| PREDICTED: protocadherin alpha-2 [Saimiri boliviensis boliviensis]
          Length = 815

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYH-V 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 220 VQILIKVLDVNDNEPSFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLSSDV 279

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF+IDP SG I T GKL   E   Y I V ATD G  S     ++ + +   N 
Sbjct: 280 SSTIQTKFKIDPSSGEIRTKGKLDYEESKSYEIQVTATDKGIPSMSGHCKILLKLLDIND 339

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 340 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 374



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 15/110 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------------PMIPPIQIQAGEA 66
            +FQV AR+         V+L V + D NDNAP+L              + P  + AG  
Sbjct: 525 LQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPQLLAPRAGTAAGAVSEVVPWSVGAGHV 584

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
              + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 585 ---VGKVRAVDADSGYNAWLSYELQLGTGSVRIPFRVGLYTGEISTTRAL 631



 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 17/152 (11%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +     +  
Sbjct: 115 VEVKDINDNPPVFPMTVKTIRFFESRLIDSRFPLEGASDADIGVNALLSYKL-----SSS 169

Query: 99  HKFRIDPR-SGVIETTGKLIAGE--------QYSITVQATDTGGKSSQTIVEVSV-VPGP 148
             F +D + S  +  +  L+ G+        + ++ + ATD G       V++ + V   
Sbjct: 170 EFFFLDIQTSDELSQSLSLVLGKSLDREETAEINLLLVATDGGKPELTGTVQILIKVLDV 229

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           N   P F Q+ Y V + E  +  + V  +  S
Sbjct: 230 NDNEPSFAQSVYKVKLLENTANGTLVVKLNAS 261


>gi|390341791|ref|XP_785997.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
           [Strongylocentrotus purpuratus]
          Length = 1431

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           F++ A +      S  V LTVN++D ND+ P    P       +       IV++ A+DN
Sbjct: 372 FRLTATDHGTPPKSAQVYLTVNVDDRNDHTPVFEQPSYVETTNEGQNPGTLIVRVRASDN 431

Query: 79  DLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--- 132
           D G+NAEI YSI  V+N   +  F ++P SG I+T  +L     E+Y+I V A D G   
Sbjct: 432 DDGLNAEIRYSI--VNNESPNDVFTMNPTSGEIKTLVRLDREQTERYNILVMAQDMGTDP 489

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           GK + T   +  V   N  SP F Q TY+V+V E  S
Sbjct: 490 GKRNSTAEVLLTVLDLNDNSPHFSQLTYEVSVREDVS 526



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 15/178 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+  +   + F VIA +   + +S   S+T+ + D+NDNAP           A  A  
Sbjct: 683 LDRESGH--SWEFNVIAVDHGESPSSSTASVTITVTDVNDNAPIFSEEVYHAAVAENAYH 740

Query: 69  --QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRS--GVIETTGKLIAGEQ-- 121
             +++ + ATD D      I+Y I    + TG   F I  ++  G I  T +L    +  
Sbjct: 741 GFEVITVTATDPD--EQNTISYRIVDALDPTGRIPFNILTQNNEGTITVTSQLSYNSKSF 798

Query: 122 YSITVQATDTGGKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           Y++TV A+D   +S+ T+ V V+ V   N  +PVFQ + Y+V VSEGA I   + T++
Sbjct: 799 YALTVTASDRQFESTCTVYVNVTDV---NDFAPVFQNSPYNVYVSEGADIGEVIVTVS 853



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
           D+NDN+P    +         +  G+   QI+ + ATD D G NA++ +S+ H      +
Sbjct: 504 DLNDNSPHFSQLTYEVSVREDVSPGDPESQILHVMATDADEGSNADVHFSLTH--GNFEN 561

Query: 100 KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP-GPNTRSPVFQ 156
           +FRID  +G I     L       Y ++++A D+G    +    V+V     N  SP F 
Sbjct: 562 RFRIDSVNGFISLQNSLDFETTRSYRLSIRAQDSGNPPRENTTTVTVTVLDVNDNSPQFS 621

Query: 157 QNTYDVNVSEGASINSTVATI 177
           QN Y   V E   +  ++ ++
Sbjct: 622 QNVYQGIVREDVDVGHSILSV 642



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 7/141 (4%)

Query: 45  DINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+NDN+P+    +   I  +  +    I+ + A D+D   NA IT+SI +  N     F 
Sbjct: 612 DVNDNSPQFSQNVYQGIVREDVDVGHSILSVMARDDDELENARITFSIPNPPND--FPFE 669

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           I+P SG I  +  L   +G  +   V A D G   S +   V++ V   N  +P+F +  
Sbjct: 670 INPTSGAITNSVSLDRESGHSWEFNVIAVDHGESPSSSTASVTITVTDVNDNAPIFSEEV 729

Query: 160 YDVNVSEGASINSTVATITVS 180
           Y   V+E A     V T+T +
Sbjct: 730 YHAAVAENAYHGFEVITVTAT 750



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
           +  I ATDND G N  ++YS+  + +    + F ++  +G+I TT  L   +   +S  +
Sbjct: 315 VATITATDNDDGDNGRLSYSLVALGDARSQNMFAVEENTGIITTTTALDREQIPSHSFRL 374

Query: 127 QATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            ATD G   KS+Q  + V+ V   N  +PVF+Q +Y    +EG
Sbjct: 375 TATDHGTPPKSAQVYLTVN-VDDRNDHTPVFEQPSYVETTNEG 416



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 13/172 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAG-EARRQIVKIEAT 76
           +   V A ++Q  +     ++ VN+ D+ND AP     P  + +  G +    IV + A 
Sbjct: 799 YALTVTASDRQFEST---CTVYVNVTDVNDFAPVFQNSPYNVYVSEGADIGEVIVTVSAA 855

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           DND G NAE++YS+         +F I+  SG I T   L   E   Y++ V A+D G  
Sbjct: 856 DNDAGANAEVSYSM-----DPSPEFEINEESGEIVTKVLLDREEISSYTLYVTASDHGIN 910

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             Q+   V V V   N  +PVF+Q ++   + E +   S+V T++ S    G
Sbjct: 911 PQQSRAFVQVTVQDINDNAPVFEQTSFTAEIQENSPAYSSVITMSASDADQG 962



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 9/97 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +TV + DINDN P         +   E R    Q++K+ A+D D G NA + Y+I     
Sbjct: 1024 ITVEITDINDNPPVFGE-RDYYVTINENRDPGEQVMKLVASDPDSGFNAHVQYTIVRGDQ 1082

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
                 F I+P +G++ +       A  QY I V AT+
Sbjct: 1083 D---FFEINPDTGLVISLEMFDYEARNQYEIIVHATN 1116


>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
          Length = 4588

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       + +A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-FEVN 2604

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G        ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI  
Sbjct: 2605 IGSNVPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRASGVITTKESLIGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V V  P  R P F +  Y   VSE   I + +  
Sbjct: 2665 ENEVFTFFVRAVDNGSPQRESVVPVCVKVLPPEIRLPRFSEPFYTYTVSEDVPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3248 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  VS+ V   N  +PVF Q+TY   VSE A +  +V T+
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVVSEDAVLEQSVITV 3357



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVKAADGGGRFCQASIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---- 132
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G    
Sbjct: 3153 DAGLNRKISYSLL---NSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRR 3209

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++ TIV +SV+   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTATSTIV-ISVL-DINDNPPVFEYREYGATVSEDILIGTEVLQV 3252



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVLSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREERD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T+ 
Sbjct: 3031 TIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTSA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y + V+A D GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQATYHLLVKAADGGGRFCQASI-VLTLEDVNDNAPEFSADPYTITVFE 3136



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVRYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1607 G-NSFTIDPILGSIKTARELDRSNQVAYDLMVKATDKGDPPMSEITSVRVFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE   + S V  +T    +S
Sbjct: 1666 KFTSREYSVEISETVGVGSFVGMVTAHSQSS 1696



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 15/180 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDREEQHVHYLKVEARDQAREEPQLLSTVILKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG ++++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTIIMWLEAHDPDLGQSSQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G     SS   VEV V+    N   PVF        V E A + S+V  ++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFPSFVEKGAVKENAPVGSSVMKVS 1057



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVN 83
            PVSL+      V + D+N+N    P + P  ++ G  +        ++K+ A D D G +
Sbjct: 1009 PVSLSSTCYVEVEVIDVNENLH--PPVFPSFVEKGAVKENAPVGSSVMKVSARDEDTGRD 1066

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
             EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV A+D G     + VE
Sbjct: 1067 GEIHYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVYASDQGVVPLSSFVE 1124

Query: 142  VSVV------PGPNTRSPVF 155
            V +         P T  PV+
Sbjct: 1125 VYIEVEDVNDNAPQTSEPVY 1144



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I+ ++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGF--FSINSKTGLITTTARKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     T+  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTVTRVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            F+F V+AR   G     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2774 FQFSVLARCSHGDYELVASVDVSIQVK--DANDNSPVLESSPYEAFIVENLPAGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ Y++    +   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDLDSGSNGQVMYNLDQSQSVDVIESFAINMETGWITTLRELDHEKRDSYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G K   SS  IV+V+V    N   P F    Y   VSE       +A ++ +
Sbjct: 2892 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPPGGVIAIVSTT 2943



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++++N+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVVSEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I Y+I    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYAIID-GNQG-SPFTIDPARGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y + + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVATTTVNIDVSDVNDNAPVFSRGNYSLIIQENKPVGFSVLQLVVT 3465



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  + YSI     
Sbjct: 808 LEIRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVRYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF ID  +GV+     L   EQ  + + V+A D   +  Q     I++VS +   N
Sbjct: 863 TDTDKFSIDSMTGVVRILNPLDREEQHVHYLKVEARDQAREEPQLLSTVILKVS-LEDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  IQ  E +     ++ + ATD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHAPQFRSTLPAGIQVKENQPVGSSLLVMNATDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  +G+ +    L     ++Y++ +  +D G   +++  ++E+ V+   N   P F 
Sbjct: 765 FMMDMETGMFKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 824 QESYFVEVSEDKEINSEI 841



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 20/163 (12%)

Query: 24   IAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVK-IEATDND 79
            + RE++  A +  V + V + D NDNAP    LP    +++ A  A  Q+++ + A D D
Sbjct: 2053 VTRERKPPAVA-HVIVKVVIEDQNDNAPVFVNLPYYALVKVDA--AVGQVIRHVTAVDRD 2109

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GK 134
             G N E+ YS+          F+I   SG I            ++Y +TV A D G    
Sbjct: 2110 SGRNGEVHYSL----KERHEHFQIG-SSGEISLKKPFEPDTLNKEYLVTVVARDGGDPAF 2164

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S++ IV ++V+   N   PVF++  Y   + E A ++S V  +
Sbjct: 2165 STEVIVPITVM---NKAMPVFEKPFYSAEIPESAQMHSPVVHV 2204



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQ 127
            +  + A D D     ++ YSI  +S      F ID ++G+I  +   +      Y++ V 
Sbjct: 2409 VTCVRACDADSSDTDKLEYSI--LSGNDHKNFVIDGKTGIITLSNLRRHALKPSYTLQVS 2466

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A+D   +SS   V V+V+ G N  SP+F QN Y+V ++E A +++ V  +
Sbjct: 2467 ASDGVFRSSAQ-VHVTVIGG-NLHSPMFLQNEYEVELAENAPVHTLVTEV 2514



 Score = 42.7 bits (99), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 22/158 (13%)

Query: 34   SVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            S+   + + + D ND+ P+        +IP   +   E    I++I A D D     E  
Sbjct: 1437 SILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTVPETE----ILQISAVDKD-----EKN 1487

Query: 88   YSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
              IY + ++     L KFR+DP +G + T+ KL   A  Q+ +TV   D      +    
Sbjct: 1488 KLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEATHQHILTVMVRDQDVPVKRNFAR 1547

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+   V V ++   N   PVF Q
Sbjct: 1710 FDINPHSGSI-ITRKALDFETLPIYTLTIQGTNMAGLSTNATVLVHLL-DENDNLPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 124 EKNTNAEARTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 183

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             YS    ++     F I P SG I  TG+L   E   Y + + A D G K
Sbjct: 184 FYYSFKDRTDM----FAIHPTSGTIVLTGRLDYTETSVYEMEILAVDRGMK 230



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 19/159 (11%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYAATLSEASVIGTSVVQVRATDADSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQT 138
             N  I+Y +    +     F ID  +G+I     L   +  Q+ I+V+A D G    S  
Sbjct: 2314 PNRGISYHMVGNHSKSHDHFHIDSGTGLISLVRTLDYEQFRQHQISVRAVDGGMPPLSSD 2373

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V    V   N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VVVTVDVTDLNDHPPLFDQQLYEARISEHAAHGHFVTCV 2412



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSASLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               ++V + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1894 RGVKVVTVNATDADSSAFSQLMYSITE-GNIG-DKFSMDRKTGTITVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFASFTAVKINVKESKESQLK-FTQDFYSAVVKENSTEARTLAVIT 2002



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++A D DLG+   +TY I  V++    +F  + R G I T  KL     A +   I 
Sbjct: 2511 VTEVKAADRDLGIYGHVTYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVIPIR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              A D GGK +   + V ++   N  +P F+   ++VN+       ++V  +  S    G
Sbjct: 2568 FMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKFEVNIGSNVPKGTSVIKVLASDADEG 2626


>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
          Length = 4590

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 6/179 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2551 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2608

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--G 119
             +  A+   V   A+D D G NA+ITY+I   S +      I+  SGVI T   LI    
Sbjct: 2609 GSSAAKGTSVVKSASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLEN 2668

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            E ++  V+A D G  S +++V V V +  P  + P F +  Y   VSE   + + +  I
Sbjct: 2669 EFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPVGTEIDLI 2727



 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQ 60
            + + E LD +  +P      V+ R++          + VN++D ND+AP           
Sbjct: 1514 LYTSEKLDHEAVSPA--HLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRV 1571

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++      ++++ A D D G NAE+ YSI   ++ N G + F IDP  G I+T  +L  
Sbjct: 1572 YESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNIGNIG-NSFMIDPVLGSIKTAKELDR 1630

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q  Y + V+ATD G      I  V + V   +  SP F    Y V +SE  SI S V 
Sbjct: 1631 SNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVSIGSFVG 1690

Query: 176  TITVSRLAS 184
             +T    +S
Sbjct: 1691 MVTAHSQSS 1699



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3217 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3271

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G +     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3272 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3331

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3332 DNTPVFSQDTYTTVISEDAVLEQSVITV 3359



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 19/173 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2978 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3032

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I++I ATD D+  NAEITY++     +G  KF+++P +G ++T+  
Sbjct: 3033 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3086

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y + V+ATD GG+  Q  + V+ +   N  +P F  + Y + V E
Sbjct: 3087 LDREEQAVYHLLVRATDGGGRFCQASIVVT-LEDVNDNAPEFSADPYAITVFE 3138



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 150  -TRSPV-FQQNTYDVNVSEGASINSTVATITV 179
             +  P+ F+++ +   V E   +   +  I+V
Sbjct: 1351 QSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ R   G       S+ V L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3095 YHLLVRATDGGGRFCQASIVVTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3154

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3155 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3211

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   + + V  +
Sbjct: 3212 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3254



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3293 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3350

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3351 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDRETISG 3407

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3408 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3467



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++F ++AR  Q     V  V +++ + D NDN+P     P     ++      ++++I A
Sbjct: 2776 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2835

Query: 76   TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A+D G
Sbjct: 2836 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2895

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             K   SS  IV+V+V    N   P F    Y   VSE       +A ++ +
Sbjct: 2896 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPQGGVIAILSTT 2945



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + ++DINDN P         +   EA      +V++ ATD+D   N  I+
Sbjct: 2264 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 2322

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
            Y ++   +     F +D  +G+I     L   +  Q++I V+A D G    SS  IV V 
Sbjct: 2323 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N   P+F+Q  Y+  +SE A
Sbjct: 2383 VT-DLNGNPPLFEQQIYEARISEHA 2406



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V + V+L D+NDN P    IPP  +++  E  
Sbjct: 883  LDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG + ++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N   PVF        V E A + S V T++
Sbjct: 998  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDAG 1064



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+N N P        + Q  EAR          +  ++A D D     ++ Y
Sbjct: 2377 VIVTVDVTDLNGNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2430

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F ID  +G+I  +   +      YS+ +  +D G   S T V V+V+ 
Sbjct: 2431 SI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2487

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SP F QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2488 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2525



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI   ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTD 866

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T    F ID  +GV+     L      ++S+ ++A D   +  Q    V V   +   N 
Sbjct: 867 T----FSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPTFIPPNYRVKVRE 938



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            NTG   F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  
Sbjct: 1708 NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1764

Query: 152  SPVFQQNTYDVNVSEGASINSTVAT 176
            +PVF Q  Y   +SE ASINS V T
Sbjct: 1765 APVFMQAEYTGLISESASINSVVLT 1789



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+I   +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSAHDEDAGRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGVI  TG+L  +  + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAADRGMK 230



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 8/109 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ TD D G+   +TY I  V++    +F I+ R G I T  KL     A +  S+ 
Sbjct: 2514 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2570

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V
Sbjct: 2571 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSV 2618



 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++TV++ DIND  P    P+     +    
Sbjct: 1837 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1896

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G +          +Y +T
Sbjct: 1897 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1954

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +  T V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1955 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAETLAVIT 2005



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  IQ  E +     ++ + +TD D G N ++ Y++   +      
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++ V VV   N   P F 
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 14/118 (11%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKL----IAGE 120
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL    ++  
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVSPA 1528

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              ++ V+  D   K +   + V+ V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1529 HLTVMVRDQDVPVKRNFARIVVN-VSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++++ATD+  G  ++  V++ +V   N   PVF 
Sbjct: 2229 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 2287

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q +Y V +SE + I ++V  +
Sbjct: 2288 QQSYAVTLSEASVIGTSVVQV 2308


>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
            familiaris]
          Length = 4589

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2548 IFTLEKLDRETPAEKVISIRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATKYEVDI 2605

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +   +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI   
Sbjct: 2606 GSNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGLE 2665

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D+G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2666 NEFFTFFVRAVDSGSPSKESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTEIDLI 2725



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 15/149 (10%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +L V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3216 TLVVSVLDINDNPPVFEYREYGATVSEDILIG---TEVLQVYAASRDIEANAEITYSI-- 3270

Query: 93   VSNTGLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            +S     KF ID ++G   +IET     +  +Y +TV+ATD G  S   +  V++ V   
Sbjct: 3271 ISGNEHGKFSIDSKTGAIFIIETL-DYESSHEYYLTVEATDGGTPSLSDVATVNINVTDI 3329

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  SPVF Q+TY   +SE A +  +V T+
Sbjct: 3330 NDNSPVFSQDTYTAVISEDALLEQSVITV 3358



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPICEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T  
Sbjct: 3031 TIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTLA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  +  + V  V   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQEVYNLLVKATDGGGRFCEANI-VLTVEDVNDNAPEFSADPYTITVFE 3136



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 15/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN P+   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 911  VLLKVSLEDVNDNPPKF--IPPNYRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLL- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +     L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 968  --DHGEGHFDVDKLSGAVRIVQHLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N  SPVF        V E   + S+V T++
Sbjct: 1026 NENLHSPVFSSFVEKGVVKEDVPVGSSVMTVS 1057



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V VSV    N  S
Sbjct: 1607 G-NSFTIDPVLGSIKTARELDRNSQVEYDLMVKATDQGNPPMSEIASVHVSVTIADNA-S 1664

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y V +SE   + S V  +T    +S
Sbjct: 1665 PKFTSKEYSVEISETIGVGSFVGMVTAHSQSS 1696



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             I+       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IIENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + +
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRL 1254



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  I ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPERERPERERNAKREPIYRVIATDKDDGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F++  +   V E   +   +  ITV
Sbjct: 1351 PSVEPISFEEPFFTFTVMESDPVAHMIGVITV 1382



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   E     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2774 YQFSILARCTHEDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENLPAGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L     ++Y I V A+D
Sbjct: 2832 RASDLDSGTNGQVMYSLDQSQSVEVIESFAINMETGWISTLKELDHEKRDRYQIQVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2892 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ DINDN+P         + + +A   + ++ + A D D   N+ I YSI    N
Sbjct: 3321 TVNINVTDINDNSPVFSQDTYTAVISEDALLEQSVITVMADDTDGPSNSRIRYSIID-GN 3379

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
             G   F IDP  G ++ T KL+  E    Y++TVQA+D G         V++ V   N  
Sbjct: 3380 QG-SPFTIDPAKGEVKVT-KLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDN 3437

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
            +PVF +  Y V + E   +  +V  + V+
Sbjct: 3438 APVFSKGNYSVIIQENKPVGFSVLQLIVT 3466



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q   A            ++++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFVQQSYATTLSEASVIGTSVIQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D G    SS 
Sbjct: 2314 PNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRALDYEQFQQHKIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F Q  Y+  +SE A
Sbjct: 2374 VIVTVDVT-DLNDNPPLFDQQIYEAKISEHA 2403



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I         V  ++A D D     ++ YSI  +S
Sbjct: 2374 VIVTVDVTDLNDNPPLFDQQIYEAKISEHAIHGHFVTCVKAYDADSSDIDKLDYSI--LS 2431

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ V  +D   +SS   V ++V+ G N  S
Sbjct: 2432 GNDHKNFVIDSETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSAQ-VHITVIGG-NLHS 2489

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF Q+ Y+V ++E A +++ V  +  +   SG
Sbjct: 2490 PVFLQSEYEVELAENAPLHTLVIEVKATDGDSG 2522



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+ID  +GVIET+ +L   +   Y +TV 
Sbjct: 1053 VMTVSARDEDTGRDGEIRYSIRDGSGVGV--FKIDEETGVIETSDRLDRESTSHYWLTVY 1110

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            A D G     + +E+ +         P T  PV+
Sbjct: 1111 AADRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           + + + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 IDIRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +GV++    L    Q  + + ++A D   +  Q +  V +   +   N 
Sbjct: 863 TDTDKFSIDSMTGVVKIVYPLDREVQQVHYLKIEARDQAREEPQLLSTVLLKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPKFIPPNYRVKVRE 938



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  I+  E       I+ + ATD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHTPQFRSSLPTGIEVKENHPVGSNIIVLNATDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +  +D G   K++  ++++ V+   N   P F 
Sbjct: 765 FIIDMETGMLKILSPLDRETTDKYTLNITVSDLGIPQKAAWRLIDIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 824 QESYFVEVSEDKEINSEI 841



 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+   ITY I  V++    +F  + R G I T  KL     A +  SI 
Sbjct: 2511 VIEVKATDGDSGIYGHITYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVISIR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+V++   A   ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKYEVDIGSNAPKGTSVIKVLASDADEG 2626



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 45   DINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TG 97
            D ND+ P+        +IP   I   E    I++I A D D     ++ Y++   S+   
Sbjct: 1448 DTNDHRPQFSASKYEVVIPEDTIPETE----ILQISAVDKD--EKNKLIYTLQSSSDPLS 1501

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
            L KFR+DP +G + T+  L   A  Q+ +TV   D      +    + V V   N  +P 
Sbjct: 1502 LKKFRLDPATGSLSTSETLDHEATHQHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPW 1561

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F  ++Y+  V E A++ S V  +T
Sbjct: 1562 FTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N   PVF Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPVYTLIIQGTNMAGLSTNTTVLVHL-QDENDNLPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            + Y   +SE ASINS V T   + L       +KE N+
Sbjct: 1768 SEYVGLISESASINSVVLTDKNAPLVIRATDADKESNA 1805



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 119 IVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 178

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  YS    ++     F I P SG +  TG+L   E   Y + + A D G K
Sbjct: 179 GTNGEFYYSFKDRTDM----FAIHPTSGTVVLTGRLDYAETKLYEMEILAVDRGMK 230



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 25/145 (17%)

Query: 45   DINDNAP---RLPMIPPIQIQ--AGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTG 97
            D NDNAP    LP    +++    G   R +    A D D G N E+ Y +  +H     
Sbjct: 2073 DQNDNAPVFVNLPYYAVVKVDTVVGHVIRHVT---AVDRDSGRNGEVHYYLKEHH----- 2124

Query: 98   LHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
               F+I   SG I    +       ++Y ITV A D G    S++ IV ++V+   N   
Sbjct: 2125 -EHFQIG-SSGEISLKKQFEPDTLNKEYLITVVAKDGGNPAFSAEVIVPITVM---NKAM 2179

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF++  Y   V E   ++S V  I
Sbjct: 2180 PVFEKPFYSAEVPENIQMHSPVVHI 2204



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+ + DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D R+G I          +Y  T
Sbjct: 1894 RGVKVITVNATDADSSAFSQLMYSITE-GNIG-EKFFMDYRTGTITVQNTTQLRSRYEFT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+ +D G   S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRVSD-GRFVSFTSVKINVKESKESQLK-FTQDVYSAVVKENSTEARTLAVIT 2002



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 22/134 (16%)

Query: 35  VPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
           V V  TV LN++NDN P    I      P  +  GE   QI  + A D D     E+   
Sbjct: 551 VEVLATVTLNNLNDNTPLFEKINCEGTIPRDLGVGE---QITTVSAIDAD-----ELQLV 602

Query: 90  IYHV-SNTGLHKFRIDPRSGVIETTGKLIAG-----EQYSITVQATDTGGKSSQTIVEVS 143
            Y + +   L  F ++P SGV+     L+ G       +S+ + ATD    ++   + ++
Sbjct: 603 RYQIEAGNELDLFSLNPNSGVLSLKQSLLEGLGTRVSFHSLRITATDGENFATPLYINLT 662

Query: 144 VVPGPNTRSPVFQQ 157
           V     +R PV  Q
Sbjct: 663 VAA---SRKPVHLQ 673


>gi|291226230|ref|XP_002733097.1| PREDICTED: hedgling-like, partial [Saccoglossus kowalevskii]
          Length = 947

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 21/198 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPI 59
           +++   LD D  N  ++ F+ +A ++     +   S+ + L DINDNAP          +
Sbjct: 2   ILTNRRLDFDDVNNRRYEFEALAVDQGEPGLTSTASIKIQLVDINDNAPIFTEPVYYGNV 61

Query: 60  QIQAGEARRQIVK--IEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGK 115
              A      I+K  IE TD D G NA++ Y++     TG +  +F ID  +G+I TT  
Sbjct: 62  DENAETGTTVIMKRYIETTDADAGRNADVFYTL-----TGNYSDQFHIDANTGIITTTND 116

Query: 116 ----LIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
               ++  E+   Y + V A D G  +S   + ++ V   N  +P+F++  Y  NVSE A
Sbjct: 117 DATAILDREEISLYHLVVTAHD-GAHNSTVPINIT-VNDVNDNAPLFEEAVYHFNVSEDA 174

Query: 169 SINSTVATITVSRLASGC 186
           ++ +TV  +    + +G 
Sbjct: 175 TVGTTVGLVVAQDMDTGI 192



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 21/192 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGE 65
           LD +  +  ++ F  +A ++     +   S+ + L DINDNAP          +   A  
Sbjct: 324 LDFEEDDSRRYAFLALAVDQGEPGLTSTASIKIQLVDINDNAPIFTEPVYYGNVDENAET 383

Query: 66  ARRQIVK--IEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGK----LI 117
               I+K  IE TD D G NA++ Y++     TG +  +F ID  +G+I TT      ++
Sbjct: 384 GTTVIMKRYIETTDADAGRNADVFYTL-----TGNYSDQFHIDANTGIITTTNDDATAIL 438

Query: 118 AGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E+   Y + V A D G  +S   + ++V    N  +P+F++  Y  NVSE A++ +TV
Sbjct: 439 DREEISLYHLVVTAHD-GAHNSTVPINITV-NDVNDNAPLFEKAVYHFNVSEDATVGTTV 496

Query: 175 ATITVSRLASGC 186
             +    + +G 
Sbjct: 497 GLVVAQDMDTGI 508



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGE 65
           LD +  +  ++ F  +A ++     +   S+ + L DINDNAP          +   A  
Sbjct: 640 LDFEEDDSRRYAFLALAVDQGEPGLTSTASIKIQLVDINDNAPIFTEPVYYGNVDENAET 699

Query: 66  ARRQIVK--IEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLIAG-- 119
               I+K  IE TD D G NA++ Y++     TG +  +F ID  +G+I TT        
Sbjct: 700 GTTVIMKRYIETTDADAGRNADVLYAL-----TGNYSDQFHIDANTGIITTTTDDATAIL 754

Query: 120 -----EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                  Y + V A D G  +S   + ++V    N  +P+F++  Y  NVSE AS+ +TV
Sbjct: 755 DREEISLYHLVVTAHD-GAHNSTVPINITV-NDVNDNAPLFEETVYHFNVSEDASVGTTV 812

Query: 175 ATITVSRLASGC 186
             I    + +G 
Sbjct: 813 GLIVAQDMDTGI 824



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 26/169 (15%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDL 80
           V+        ++VP+++TVN  D+NDNAP     +    +    +    V  I A D D 
Sbjct: 765 VVTAHDGAHNSTVPINITVN--DVNDNAPLFEETVYHFNVSEDASVGTTVGLIVAQDMDT 822

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQATDTG 132
           G+N+ +TY +   S+    KF +DP SG +        +TTG       Y+I +  TD G
Sbjct: 823 GINSRLTYFLVGGSD---GKFAVDPVSGAVFVLSHLDRDTTGS------YTIILSVTDGG 873

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
                   E  + +   N  +P F  + Y  +V E    G  + + +AT
Sbjct: 874 YDIFSDFTEADIQILDVNDNAPTFDSDIYLADVEEELTPGTYLFTVIAT 922



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 22/175 (12%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDL 80
           V+        ++VP+++TVN  D+NDNAP     +    +         V  + A D D 
Sbjct: 449 VVTAHDGAHNSTVPINITVN--DVNDNAPLFEKAVYHFNVSEDATVGTTVGLVVAQDMDT 506

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQATDTG 132
           G+N+ +TY +   S+    KF +DP SG +        +TTG       Y+I +  TD G
Sbjct: 507 GINSRLTYFLVGGSD---GKFAVDPVSGAVFVLSHLDRDTTGS------YTIILSVTDGG 557

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
                   E  + +   N  +P F  + Y  +V E     + + T+T +   +G 
Sbjct: 558 DDIFSDFTEADIQILDVNDNAPTFDSDIYLADVEEELPSGTYLFTVTATDPDAGS 612



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 22/175 (12%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDL 80
           V+        ++VP+++TVN  D+NDNAP     +    +         V  + A D D 
Sbjct: 133 VVTAHDGAHNSTVPINITVN--DVNDNAPLFEEAVYHFNVSEDATVGTTVGLVVAQDMDT 190

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQATDTG 132
           G+N+ +TY +   S+    KF +DP SG +        +TTG       Y+I +  TD G
Sbjct: 191 GINSRLTYFLVGGSD---GKFAVDPVSGAVFVLSHLDRDTTGS------YTIILSVTDGG 241

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
                   E  + +   N  +P F  + Y  +V E     + + T+T +   +G 
Sbjct: 242 DDIFSDFTEAGIQILDVNDNAPTFDSDIYLADVEEELPSGTYLFTVTATDPDAGS 296



 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 23/142 (16%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGL 98
           D+NDNAP         I   +   ++        + ATD D G N ++ +S+        
Sbjct: 257 DVNDNAPTFDS----DIYLADVEEELPSGTYLFTVTATDPDAGSNGDVLFSLTTT----- 307

Query: 99  HKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
             F I+  +G I T  +L   E    +Y+    A D G  G +S   +++ +V   N  +
Sbjct: 308 -DFVINQTTGEISTHVRLDFEEDDSRRYAFLALAVDQGEPGLTSTASIKIQLVD-INDNA 365

Query: 153 PVFQQNTYDVNVSEGASINSTV 174
           P+F +  Y  NV E A   +TV
Sbjct: 366 PIFTEPVYYGNVDENAETGTTV 387



 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 23/142 (16%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGL 98
           D+NDNAP         I   +   ++        + ATD D G N ++ +S+        
Sbjct: 573 DVNDNAPTFDS----DIYLADVEEELPSGTYLFTVTATDPDAGSNGDVLFSLTTT----- 623

Query: 99  HKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
             F I+  +G I T  +L   E    +Y+    A D G  G +S   +++ +V   N  +
Sbjct: 624 -DFVINQTTGEISTHVRLDFEEDDSRRYAFLALAVDQGEPGLTSTASIKIQLVD-INDNA 681

Query: 153 PVFQQNTYDVNVSEGASINSTV 174
           P+F +  Y  NV E A   +TV
Sbjct: 682 PIFTEPVYYGNVDENAETGTTV 703


>gi|114050895|ref|NP_059088.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 1 precursor
           [Mus musculus]
 gi|148670020|gb|EDL01967.1| cadherin EGF LAG seven-pass G-type receptor 2 [Mus musculus]
 gi|225356528|gb|AAI56537.1| Cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
           Drosophila) [synthetic construct]
          Length = 2919

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q 
Sbjct: 240 VVTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQ 292

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETT 113
           +  E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T 
Sbjct: 293 EYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPRSGVIRTR 352

Query: 114 GKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y +TV+A+D G   G  S T +    V   N  +P F +  Y V V E  
Sbjct: 353 GPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDV 412

Query: 169 SINSTVATITVS 180
           +  + V  +T S
Sbjct: 413 TPGAPVLRVTAS 424



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 832

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 833 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 891

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 892 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 946



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 576 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 634

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 635 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 685

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 686 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DINDNAP + +  P Q    E+      ++ ++A D D G NA + YS+  V +
Sbjct: 491 VTVQVLDINDNAP-IFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAGVGH 549

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I    +L   E   YS  V+A D G  +      VSV +   N  +
Sbjct: 550 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 607

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F Q  Y V ++E A++ ++V T++
Sbjct: 608 PTFTQPEYTVRLNEDAAVGTSVVTVS 633



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 698 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 752

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 753 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 811

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 812 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 845



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 872  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 929

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 930  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 987

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 988  DRPEYVLVIQATSAPLVSRATV 1009



 Score = 37.4 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S   
Sbjct: 387 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 443

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRS 152
             +F +D ++G ++    L     ++Y++ ++A D G     +   +V V V+   N  +
Sbjct: 444 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVL-DINDNA 502

Query: 153 PVFQQNTYDVNVSEGASINSTV 174
           P+F    +   V E   +   V
Sbjct: 503 PIFVSTPFQATVLESVPLGYLV 524



 Score = 36.6 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 9/141 (6%)

Query: 49  NAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFR 102
           N    P   P   QA     Q     +  + A D D G    + Y++  + ++   H F 
Sbjct: 174 NVNTAPQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFS 233

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           +DP +GV+ T  +L       +   V A D G      +  +++ V   N   PVF+Q  
Sbjct: 234 LDPITGVVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQE 293

Query: 160 YDVNVSEGASINSTVATITVS 180
           Y  ++ E   +   V T+  +
Sbjct: 294 YKESLRENLEVGYEVLTVRAT 314


>gi|297664216|ref|XP_002810567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pongo
           abelii]
          Length = 2958

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 61/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 276 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 328

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 329 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 388

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 389 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 448

Query: 170 INSTVATITVS 180
             S V  +T S
Sbjct: 449 PGSPVLRVTAS 459



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 816 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 867

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 868 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 926

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 927 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 981



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 611 YSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 669

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 670 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 720

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 721 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 777



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 733 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 787

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 788 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 846

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 847 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 880



 Score = 39.3 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 415 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGSPVLRVTASDRDKGSNALVHYSI 473

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVV 145
             +S     +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+
Sbjct: 474 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL 531

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              N  +P+F    +   V E   +   V
Sbjct: 532 -DINDNAPIFVSTPFQATVLESVPLGYLV 559



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 907  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 964

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 965  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 1022

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 1023 DRPEYVLVIQATSAPLVSRATV 1044


>gi|363732787|ref|XP_420249.3| PREDICTED: protocadherin-11 X-linked-like [Gallus gallus]
          Length = 1239

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 14/188 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP    P+I     +      Q+ KI A
Sbjct: 431 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISA 490

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G NAEI+Y +    +     F +D R+G++    KL   +Q  YS TV A D G 
Sbjct: 491 TDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGM 547

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------C 186
              QT   V+V V   N  SP F  N Y+  V E   +  TV  ITV+   SG       
Sbjct: 548 PPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAAVTL 607

Query: 187 AIMNKEEN 194
           +I+N  +N
Sbjct: 608 SILNGRDN 615



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V + N+  D    G + FQV A +      S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P     G     + K+ A DND G+NAE+ YSI   ++ GL  F ID  +G I    
Sbjct: 683 ELVPTSSSPGSV---VTKVFAVDNDTGMNAELRYSIIGGNSRGL--FAIDQLTGNITLKE 737

Query: 115 KLIAGEQ--YSITVQATDTGGKSS 136
           K+I  +   + + ++  D G   S
Sbjct: 738 KVITSDHGLHRLVIKVNDLGQPES 761



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 33/186 (17%)

Query: 22  QVIAREKQGT---------AASVPVS----LTVNLNDINDNAPRLP------MIPPIQIQ 62
           Q++ RE++ T           S P S    L V + D+NDN P          IP    +
Sbjct: 205 QILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIP----E 260

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                  + ++ ATD DLG NA+I +     +S+     F ID  +G+I     L   E 
Sbjct: 261 NAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKKLFAIDNATGLITIREPLDREES 320

Query: 122 --YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINST 173
             + +TV A+D     S+  V V+V      VP  +TR  +   N   V +SE A +N+ 
Sbjct: 321 PVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNG-TVLLSEKAPLNTK 379

Query: 174 VATITV 179
           +A ITV
Sbjct: 380 IALITV 385



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------- 51
           ++ +   LDR+  +  ++ F V+A++          ++TV++ D NDN+P          
Sbjct: 521 ILTAVRKLDREKQD--RYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFY 578

Query: 52  ---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
               LPM   + +           I  TD D G NA +T SI +    G   F IDP +G
Sbjct: 579 VPENLPMYGTVGL-----------ITVTDADSGENAAVTLSILN----GRDNFIIDPLTG 623

Query: 109 VIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
           VI         +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVV-DVNDNRPVF 673



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+GVN    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK-- 180

Query: 95  NTGLHKFRIDPRSGVIET----------TGKLIAGEQ---YSITVQATDTGG--KSSQTI 139
             G + F +D    +IET            +++  EQ   Y + ++  D G   +SS  I
Sbjct: 181 --GQNVFGLD----IIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V+V    N   PVF++N  +V++ E A + ++V+ +
Sbjct: 235 LQVTVT-DVNDNRPVFKENDIEVSIPENAPVGTSVSQL 271



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  +E LDR+       +  V+A +  G++     ++TVN+ DINDN P +    +I P
Sbjct: 308 LITIREPLDRE--ESPVHKLTVLASD--GSSTPSRATVTVNVTDINDNVPSIDTRYIINP 363

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           +       +      +I  I   D D  +N ++T    H        FR+ P      ++
Sbjct: 364 VNGTVLLSEKAPLNTKIALITVMDKDSDLNGKVTCFTDHDV-----PFRLKPVFDNQFLL 418

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           ET   L   +  +Y+I + A+D+G    +Q+ + +  +   N  +PVF Q    +++ E 
Sbjct: 419 ETATFLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPEN 478

Query: 168 ASINSTVATITVSRLASG 185
            +  + +  I+ +   SG
Sbjct: 479 NAPGTQLTKISATDADSG 496


>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
           chinensis]
          Length = 2958

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 209 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 261

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      G  + F IDPRSGVI T G
Sbjct: 262 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGAGPSEVFEIDPRSGVIRTRG 321

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 322 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 381

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 382 PGAPVLRVTAS 392



 Score = 63.2 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 749 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 800

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            ++++ ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 801 SVLQVSATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 859

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 860 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 914



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 544 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 602

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 603 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 653

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 654 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 710



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 666 VVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 720

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 721 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 779

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  ++ +   SG
Sbjct: 780 APQFLRDSYQGSVYEDVPPFTSVLQVSATDRDSG 813



 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLG 81
            R+    +A+  V L+V   D NDNAP+      + +Q  E       ++++ A+D D G
Sbjct: 341 GRDPGPRSATAAVFLSVE--DDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKG 397

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSS 136
            NA + YSI  +S     +F +D ++G ++    L     ++Y++ V+A D G     + 
Sbjct: 398 SNALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNV 455

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +V V V+   N  +P+F    +   V E   +   V
Sbjct: 456 SGLVTVQVL-DINDNAPIFVSTPFQATVLESVPLGYLV 492



 Score = 38.1 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 840 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 897

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 898 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 955

Query: 120 E--QYSITVQATDTGGKSSQTI 139
           +  +Y + +QAT     S  T+
Sbjct: 956 DRPEYILVIQATSAPLVSRATV 977


>gi|326924388|ref|XP_003208410.1| PREDICTED: protocadherin-11 X-linked-like [Meleagris gallopavo]
          Length = 1010

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 14/188 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP    P+I     +      Q+ KI A
Sbjct: 431 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISA 490

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G NAEI+Y +    +     F +D R+G++    KL   +Q  YS TV A D G 
Sbjct: 491 TDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGM 547

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------C 186
              QT   V+V V   N  SP F  N Y+  V E   +  TV  ITV+   SG       
Sbjct: 548 PPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAAVTL 607

Query: 187 AIMNKEEN 194
           +I+N  +N
Sbjct: 608 SILNGRDN 615



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V + N+  D    G + FQV A +      S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P     G     + K+ A DND G+NAE+ YSI   ++ GL  F ID  +G I    
Sbjct: 683 ELVPTSSSPGSV---VTKVFAVDNDTGMNAELRYSIIGGNSRGL--FAIDQLTGNITLKE 737

Query: 115 KLIAGEQ--YSITVQATDTGGKSS 136
           K+I  +   + + ++  D G   S
Sbjct: 738 KVITSDHGLHRLVIKVNDLGQPES 761



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 33/186 (17%)

Query: 22  QVIAREKQGT---------AASVPVS----LTVNLNDINDNAPRLP------MIPPIQIQ 62
           Q++ RE++ T           S P S    L V + D+NDN P          IP    +
Sbjct: 205 QILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIP----E 260

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                  + ++ ATD DLG NA+I +     +S+     F ID  +G+I     L   E 
Sbjct: 261 NAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKKLFAIDNATGLITIREPLDREES 320

Query: 122 --YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINST 173
             + +TV A+D     S+  V V+V      VP  +TR  +   N   V +SE A +N+ 
Sbjct: 321 PVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNG-TVLLSEKAPLNTK 379

Query: 174 VATITV 179
           +A ITV
Sbjct: 380 IALITV 385



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------- 51
           ++ +   LDR+  +  ++ F V+A++          ++TV++ D NDN+P          
Sbjct: 521 ILTAVRKLDREKQD--RYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFY 578

Query: 52  ---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
               LPM   + +           I  TD D G NA +T SI +    G   F IDP +G
Sbjct: 579 VPENLPMYGTVGL-----------ITVTDADSGENAAVTLSILN----GRDNFIIDPLTG 623

Query: 109 VIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
           VI         +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVV-DVNDNRPVF 673



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+GVN    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK-- 180

Query: 95  NTGLHKFRIDPRSGVIET----------TGKLIAGEQ---YSITVQATDTGG--KSSQTI 139
             G + F +D    +IET            +++  EQ   Y + ++  D G   +SS  I
Sbjct: 181 --GQNVFGLD----IIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V+V    N   PVF++N  +V++ E A + ++V+ +
Sbjct: 235 LQVTVT-DVNDNRPVFKENDIEVSIPENAPVGTSVSQL 271



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  +E LDR+       +  V+A +  G++     ++TVN+ DINDN P +    +I P
Sbjct: 308 LITIREPLDRE--ESPVHKLTVLASD--GSSTPSRATVTVNVTDINDNVPSIDTRYIINP 363

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           +       +      +I  I   D D  +N ++T    H        FR+ P      ++
Sbjct: 364 VNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV-----PFRLKPVFDNQFLL 418

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           ET   L   +  +Y+I + A+D+G    +Q+ + +  +   N  +PVF Q    +++ E 
Sbjct: 419 ETATFLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPEN 478

Query: 168 ASINSTVATITVSRLASG 185
            +  + +  I+ +   SG
Sbjct: 479 NAPGTQLTKISATDADSG 496


>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
 gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
          Length = 2655

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V +TV+++D+NDNAP    +P    I+   G   +Q+V + A D D G NAEI Y  +  
Sbjct: 1244 VRVTVDISDVNDNAPVFTQVPFETTIERNIG-VNQQVVTVTAEDKDTGSNAEILYR-FDS 1301

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
            SN    KF I P+SG+I T   L+      + + V A D G   KSS  +V +++     
Sbjct: 1302 SNANSQKFNIGPQSGIITTQVSLVGDSANIFRLQVIAEDQGSPAKSSTGLVVITMSDSSM 1361

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
            T +  F   TY   +SE A  N+ + +++ SR
Sbjct: 1362 T-TLRFDNGTYSAYISENAIANTDIISVSASR 1392



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 9/172 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIEAT 76
            +R ++ A +K     +   +L +++ DINDN P  P   PP+ +  G E   ++  + A 
Sbjct: 1542 YRLELRAVDKGTPRLTGSATLRISVVDINDNRPTFPEPYPPVNVLEGAEVGSELALVTA- 1600

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
             ND+  +  ITY+     N G   F ID  SG +     L   + + Y IT+ A+D    
Sbjct: 1601 -NDIDTDPTITYTFTTHGNPG-GVFSIDRYSGKVTLAQPLDRESVQSYIITIMASDEV-H 1657

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            + QT VE++V+   N   PVF Q TY V+++E    + +VAT+T +   +G 
Sbjct: 1658 TDQTNVEINVL-DENDNPPVFDQQTYQVDIAEMVPPHYSVATVTATDRDAGS 1708



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 14/189 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP--VSLTVNLNDINDNAPRLPMIP-P 58
            L+  K++ + D     + R  V A   Q T  S+    ++ VNL D NDNAPR       
Sbjct: 1421 LITVKDSTNLDFETAQRVRLIVTA---QATTPSLYGYATVWVNLRDENDNAPRFDQDRYT 1477

Query: 59   IQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              +  G  R   ++++ ATD D G N+E+ YSI  VS    + F ID   G+I T  ++ 
Sbjct: 1478 TSVWEGNDRGMFVIQVSATDADSGTNSEVQYSI--VSGNHDNAFVIDRDRGIISTNVRMD 1535

Query: 118  --AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                + Y + ++A D G    +    + +SVV   + R P F +    VNV EGA + S 
Sbjct: 1536 REVRDSYRLELRAVDKGTPRLTGSATLRISVVDINDNR-PTFPEPYPPVNVLEGAEVGSE 1594

Query: 174  VATITVSRL 182
            +A +T + +
Sbjct: 1595 LALVTANDI 1603



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 13/191 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            V+S + LDR+      +   V A +      +   ++TV ++D NDN P +   P  Q  
Sbjct: 1107 VISDQALDRE--TVPLYHLIVQAHDNTDAPRTSTTNITVAVSDENDNNP-IFTDPSYQQT 1163

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              E       ++++ A D D GVN E+    Y +SN     FRID  SG+I TT  L   
Sbjct: 1164 IQEDVSVGSTVIRVTAQDRDEGVNGEV---FYFLSNETNGMFRIDNTSGIITTTRLLDRE 1220

Query: 120  EQ--YSITVQATDTGGKSSQTI-VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            +Q  YS    A+D G    +T  V V+V +   N  +PVF Q  ++  +     +N  V 
Sbjct: 1221 KQSVYSFDAYASDRGPFGPRTSNVRVTVDISDVNDNAPVFTQVPFETTIERNIGVNQQVV 1280

Query: 176  TITVSRLASGC 186
            T+T     +G 
Sbjct: 1281 TVTAEDKDTGS 1291



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 10/152 (6%)

Query: 41  VNLNDINDNAP-RLPMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           +++ D NDNAP  +     I+++ G EA   I  + A DND G N  ++Y I   +  G 
Sbjct: 612 IHVTDSNDNAPVFVNSTISIEVEEGLEAGSTIGSVHALDNDEGENGRVSYEIMQGNLYG- 670

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSP 153
             F +D  +G I T  +L      +Y + VQA D      KSS   V V+V+   N  +P
Sbjct: 671 -TFGVDRNTGRIFTAKELDFELNARYRLIVQAQDNNARSQKSSTIYVNVNVI-DINDNAP 728

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F+ +     + E  ++NSTV T + + + SG
Sbjct: 729 TFRSDPVMFGLQENTAVNSTVWTFSATDVDSG 760



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)

Query: 43  LNDINDNAPRLPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           + D+NDN P         +   E     ++ + A D+D G N  +TY I  VS     KF
Sbjct: 829 VEDVNDNTPVFVSRTETYVMEDEPVGYHVMYVIAVDDDFGDNGRVTYQI--VSGNQGGKF 886

Query: 102 RIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQ 157
            +DP +G++    +L      +Y + + ATD G   +S+  ++ + V    N   P F Q
Sbjct: 887 LLDPNTGLLAIERRLDRETESRYVLNITATDHGTPSRSASHLITIHV-RDVNDNQPRFLQ 945

Query: 158 NTYDVNVSEGASINSTVATITVSRLASGC 186
           +TY  +VSE  S  ++V  IT     +G 
Sbjct: 946 DTYQASVSENQSPGTSVIQITALDADAGT 974



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 41   VNLNDINDNAPRL----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +N+ D NDN P             M+PP           +  + ATD D G NAEITYS+
Sbjct: 1665 INVLDENDNPPVFDQQTYQVDIAEMVPP--------HYSVATVTATDRDAGSNAEITYSM 1716

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VP 146
               +   +  F +DPR+G I T   +      S   + ++A D G  S  ++V V + V 
Sbjct: 1717 ---TVAPVEGFYVDPRNGTIFTNKTIEINRMQSTIQLVIEARDHGVPSLASVVAVRIQVN 1773

Query: 147  GPNTRSPVFQQNTYDVNVSEGA 168
              N  +P F    Y+ +VSE A
Sbjct: 1774 DINNHAPQFTAGQYEEHVSEAA 1795



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 16/187 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ +K  LDR+     ++   +  R++     +   +L + + D+NDNAP          
Sbjct: 465 VIKTKRPLDRE--TTARYDLVLKVRDRGTPPRTATATLHIVVEDMNDNAPYFSHSGQYLG 522

Query: 62  QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTG 114
           +  E +    +++++ A D D G N  ITY +  V++T    G   F I  +SG+I T  
Sbjct: 523 EVEEHQPNGTEVIRVLADDPDNGENGTITYRL--VTSTPGMNGEEMFNIHSQSGLITTNA 580

Query: 115 KLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            L   ++  Y ++V A D G   +   T V + V    N  +PVF  +T  + V EG   
Sbjct: 581 PLDREQKPTYVLSVAAVDGGTPPRERTTFVHIHVTDS-NDNAPVFVNSTISIEVEEGLEA 639

Query: 171 NSTVATI 177
            ST+ ++
Sbjct: 640 GSTIGSV 646



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 11/171 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+  +  LDR+     ++   + A +    + S    +T+++ D+NDN PR  +    Q 
Sbjct: 894  LLAIERRLDRE--TESRYVLNITATDHGTPSRSASHLITIHVRDVNDNQPRF-LQDTYQA 950

Query: 62   QAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               E +     +++I A D D G N  +TY+I         +F I+ ++GVI T  +L  
Sbjct: 951  SVSENQSPGTSVIQITALDADAGTNGVLTYNIPR--GVAEDRFTIEEQTGVIRTAFRLDR 1008

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             E+  Y +T  A D    S      V V V   N  +PVF+   Y + V E
Sbjct: 1009 EEKDSYIVTAYARDGAYPSRFGFTSVVVSVLDTNDHAPVFKDAEYMMTVPE 1059



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 16/162 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH-- 92
            S+ +NL D NDN P  P++  ++    E R     +   EA D D G+   ++Y I    
Sbjct: 1988 SVLINLIDENDNPPDFPVLMYLE-DVPEGRPVGTLVFTAEARDKDAGIYGTLSYVILDRD 2046

Query: 93   VSNTGLHK-------FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVS 143
            V+N G          F ID  +G + T        Q  Y   ++ATDTGG S+   V VS
Sbjct: 2047 VTNDGTSDVAQGKDAFEIDSSTGEVRTREVFDYETQNTYGFYIRATDTGGLSTDVQVGVS 2106

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +   +   PVF Q+ Y   V   A + + V  +  +    G
Sbjct: 2107 -IQSVDEFPPVFTQDNYIFTVIANADVGTFVGQVEATDADGG 2147



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 10/175 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRL-PMIPPIQI-QAGE 65
           +D D  NP ++  +++A + QGT      ++L V + D NDN P   P    +Q+ ++  
Sbjct: 261 VDADDDNPLRYELKIMAHD-QGTPQRFSNLTLLVIIQDENDNGPMFSPTFYDVQVPESAS 319

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
              + +++ A D D G+N  ITY + + +++    F + P  G +    +L     + Y 
Sbjct: 320 VNYRFLQVTALDRDSGLNEFITYYLSNSADSP--NFGMFP-DGWLYVKHRLDRELRDSYF 376

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + V A D G         V V V   N   P F Q +Y  ++ E     +TV T+
Sbjct: 377 LQVVARDNGSPPRNATANVRVTVTDDNDNDPRFTQESYHFSLVENLPTGTTVGTV 431



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)

Query: 20  RFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKI 73
           R+++I + +   A    S  + + VN+ DINDNAP     P++  +Q +       +   
Sbjct: 694 RYRLIVQAQDNNARSQKSSTIYVNVNVIDINDNAPTFRSDPVMFGLQ-ENTAVNSTVWTF 752

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD- 130
            ATD D G N  + Y I      G + FRID  +G ++TT  +   +  Q+++ V+ATD 
Sbjct: 753 SATDVDSGRNGAVRYRIMDQLPNG-NNFRIDSVTGALQTTTPIDREQTSQFTLVVEATDQ 811

Query: 131 ----TGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
               +  ++  T   + +V   N  +PVF   T
Sbjct: 812 PVNLSHARTKTTTARI-LVEDVNDNTPVFVSRT 843



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 10/165 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEAT 76
            +  +V+A ++     +  V++ V ++D+ND++P       +   + EA     +V++ A 
Sbjct: 1863 YTLRVLASDRGTPERNSTVTVYVLVDDVNDHSPIFNSTQYVAQISEEAVIGAFVVRVFAF 1922

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDT--- 131
            D D G NA+I Y I   ++  L  F I+ +SGVI     L      Q+++T++A D+   
Sbjct: 1923 DADSGPNADIHYEITSGNDDSL--FAINSQSGVITVANPLDYDTVAQHNLTIRAKDSTSD 1980

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            G K + T V ++++   N   P F    Y  +V EG  + + V T
Sbjct: 1981 GAKHTITSVLINLI-DENDNPPDFPVLMYLEDVPEGRPVGTLVFT 2024



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 32/187 (17%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAG 64
            RD   P +F F                S+ V++ D ND+AP       +  +P  Q   G
Sbjct: 1021 RDGAYPSRFGF---------------TSVVVSVLDTNDHAPVFKDAEYMMTVPENQPNYG 1065

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
                 I  + A D D+G N ++ Y I    N G  KF +D  +G +          +   
Sbjct: 1066 ----VIHTVVAYDADIGTNGQVRYEIID-GNVG-GKFAVDAVTGELSVISDQALDRETVP 1119

Query: 122  -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y + VQA D       +   ++V V   N  +P+F   +Y   + E  S+ STV  +T 
Sbjct: 1120 LYHLIVQAHDNTDAPRTSTTNITVAVSDENDNNPIFTDPSYQQTIQEDVSVGSTVIRVTA 1179

Query: 180  SRLASGC 186
                 G 
Sbjct: 1180 QDRDEGV 1186



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNT 96
           + + + DINDN P   +    + I    +   I+ +  A D D G N  + YS+    N 
Sbjct: 185 VNITILDINDNRPEFTVATESVAITENVSPGTIIFVASAQDQDAGSNGLVRYSLL---NN 241

Query: 97  GLHKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTGG-KSSQTIVEVSVVPGPNTR 151
             + F ++  SG ++    + A +    +Y + + A D G  +    +  + ++   N  
Sbjct: 242 QDNLFSVNSISGEVKILRSVDADDDNPLRYELKIMAHDQGTPQRFSNLTLLVIIQDENDN 301

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            P+F    YDV V E AS+N     +T     SG 
Sbjct: 302 GPMFSPTFYDVQVPESASVNYRFLQVTALDRDSGL 336


>gi|14165405|ref|NP_113683.1| protocadherin alpha-2 isoform 2 precursor [Homo sapiens]
 gi|5457009|gb|AAD43741.1|AF152480_1 protocadherin alpha 2 short form protein [Homo sapiens]
 gi|3540168|gb|AAC34324.1| KIAA0345-like 12 [Homo sapiens]
          Length = 824

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 19  FRFQVIAREKQGTAASVP-----VSLTVNLNDINDNAPRLPMIPPIQIQAGE-------- 65
            +FQV AR+     A VP     V+L V + D NDNAP L + P     AG         
Sbjct: 531 LQFQVSARD-----AGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWS 584

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             A   + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 585 VGAGHVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|402882353|ref|XP_003904709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-22 [Papio anubis]
          Length = 830

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 19/184 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQI 61
           + + E LDR+       R Q  AR++       P S   + + DIND+ PR    P I  
Sbjct: 120 IHAMERLDREQKTFYTLRAQ--ARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGS 177

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            A     G +  Q++  +A D   G +A + YS+      G H F +DP++GVI T    
Sbjct: 178 VAELSPTGTSVMQVMASDADDPTYGSSARLVYSVL----DGEHHFTVDPKTGVIRTAVPD 233

Query: 117 I---AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
           +   + E+Y + +QATD  G+   TIV   V    N   P F Q  Y  ++ E A I + 
Sbjct: 234 LDRESQERYEVVIQATDMAGQLGXTIVVTDV----NDNPPRFPQKMYQFSIQESAPIGTA 289

Query: 174 VATI 177
           V  +
Sbjct: 290 VGRV 293



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 26/189 (13%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQ-AGE 65
           +LDR+     + R++V+    Q T  +  +  T+ + D+NDN PR P  +    IQ +  
Sbjct: 233 DLDRE----SQERYEVVI---QATDMAGQLGXTIVVTDVNDNPPRFPQKMYQFSIQESAP 285

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ 121
               + +++A D+D+G N ++TY +   S +G   F++    D +  +I    +L    Q
Sbjct: 286 IGTAVGRVKAEDSDVGENTDMTYHLKEESGSGGDVFKVTTDSDTQEAIIVVQKRLDFESQ 345

Query: 122 --YSITVQA---------TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +++ ++A          D G    Q IV V+V        P F+  +  + V E A +
Sbjct: 346 PVHTVILEALNKFVDPRFADLGTFRDQAIVRVAVT--DVDEPPEFRPPSRLLEVQEDAQV 403

Query: 171 NSTVATITV 179
            S V  +T 
Sbjct: 404 GSLVGVVTA 412


>gi|158298598|ref|XP_318783.4| AGAP009717-PA [Anopheles gambiae str. PEST]
 gi|157013961|gb|EAA14580.4| AGAP009717-PA [Anopheles gambiae str. PEST]
          Length = 1727

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 13/170 (7%)

Query: 9   LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           L+RDPP+    ++F V A+++ G        + +NL D+NDNAP+ P  +      + G 
Sbjct: 197 LNRDPPHGRASWKFTVFAQDEGGEGLVGFTEVQINLKDVNDNAPQFPNGIAYGNVTENGT 256

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
               ++ I+A D D    G NA+I YSI       +TGL  F I+P +G+I T    +  
Sbjct: 257 IGMHVMTIKAEDYDDINEGTNAKIIYSIEKNVIQEDTGLPIFDINPDTGLITTAVCCLDR 316

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           E+   YS+ + ATD GG        +  V   N   P F ++ + V V E
Sbjct: 317 EKTPDYSLQIVATDGGGLKGTGTASIK-VKDLNDMPPRFTKDEWFVEVEE 365



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 9   LDRDPP---NPGKFRFQVIAREKQGTAASVPVS---LTVNLNDINDNAPRL--PMIPPIQ 60
           LD + P   N  +FR QVI   +   +    V    + V L DINDN PR   P I    
Sbjct: 423 LDYEDPMQINGFRFRIQVIDNNEIDESDKYHVDHSWVIVKLKDINDNTPRFKKPHIETAV 482

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAG 119
            +  + R+ +   +A D D G  ++ITYSI   ++    +F ID    V I+      A 
Sbjct: 483 YENADVRKNLGTFKAVDIDKGGKSKITYSINRATDRK-RQFAIDQEGKVTIQRELDREAM 541

Query: 120 EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            ++S+ + ATD G   +++  I+ V +V   N  +PVF ++
Sbjct: 542 AKHSLEILATDDGVPPRTASAILTV-LVKDINDNAPVFAED 581


>gi|148693090|gb|EDL25037.1| mCG142133 [Mus musculus]
          Length = 4539

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 8/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2535 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2592

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2593 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2652

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                 S  V+A D G     +++ V + V  P T  P F Q+ Y   ++E  SI STV T
Sbjct: 2653 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTITEDTSIGSTVDT 2712

Query: 177  ITV 179
            + +
Sbjct: 2713 LRI 2715



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1500 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1557

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  + 
Sbjct: 1558 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMA 1615

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ TD G    S+  IV +S+    N+  P F    Y   V+E   I ++V 
Sbjct: 1616 AMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1674

Query: 176  TIT 178
             I+
Sbjct: 1675 LIS 1677



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ D+NDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2056 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2110

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++   Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2111 GHFEINPNSGNVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELPITI-VNKAMPVF 2169

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E  ++N+ + +I
Sbjct: 2170 DKPFYTASINEDITMNTPILSI 2191



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       S+ + L D+NDN P            +    +  + +++A D 
Sbjct: 3082 YNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3141

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   G+S
Sbjct: 3142 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 3198

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 3199 LSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3241



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LTVN+ D NDN P       +Q       +++     +I+++EA D DLG N E+ YS+ 
Sbjct: 800 LTVNVEDANDNNPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVMYSVL 854

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T  H+F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 855 ----TDTHQFIINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 910

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 911 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 941



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1221 IWVVVQVLDENDNRPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1279

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1280 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1337

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1338 PSPIPLTFDEPFYNFTVMESDKVTEIVGVVSV 1369



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V ++D+NDN+P    +      P  I +    + I+K+ A D D+G N +I YS+Y    
Sbjct: 3000 VTVSDVNDNSPVCDQVAYSASLPEDIPS---NKIILKVSAKDADIGSNGDIRYSLY---G 3053

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            +G ++F +DP SG ++T   L       Y++  +ATD GG+   + V + ++   N   P
Sbjct: 3054 SGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATDGGGRFCSSSV-LLLLEDVNDNPP 3112

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF  N Y   V E  +  + +  +
Sbjct: 3113 VFSSNHYTACVYENTATKALLTRV 3136



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            ++V ++ LDR+      +   V A ++  G + S   S+T+ + DINDN P       L 
Sbjct: 3169 VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYLV 3226

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KF I+P++G I    
Sbjct: 3227 TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFSINPKTGGISVLE 3280

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             L      ++ + V+A D G  +  T   VS+ +   N   P F Q+ Y   +SE A
Sbjct: 3281 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3337



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1821 NLDHEAI--AHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1877

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   +  F +DP +GV+      ++ + Y
Sbjct: 1878 PTYIGVEVLKVSATDPDSEVPPELTYSLMEGS---VDNFLMDPNTGVLTIKNNNLSKDHY 1934

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1935 MLIVRVSD--GKFYSTAMVTVMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 1987



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  +    + K
Sbjct: 1435 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDAVSMRK 1491

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FR+DP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1492 FRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1551

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1552 PLYEASVFESAALGSVVLQVT 1572



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRL--PMIPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 2762 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYETIIMEGMPVG 2813

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
             ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 2814 TKLAQVRAIDMDWGANGQVTYSLH--SDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPA 2871

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +S  V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2872 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2930



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + ++DINDN P    P       ++      ++++ +TD D G N  + Y
Sbjct: 2248 TGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRY 2307

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V ATD G    SS+ +V++ 
Sbjct: 2308 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 2365

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2366 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2402



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
           +V   + LDR+  +   +  ++ AR+K   G      V+L + L+D+ND +P  +P    
Sbjct: 868 IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYS 925

Query: 59  IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +++ +       I  +E  D DLG+  ++ YS+ +  N    +F +D  SG I  + +L 
Sbjct: 926 VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---RFEVDKASGAIRLSKELD 982

Query: 118 AGEQ--YSITVQATDTG 132
             +Q  Y++TV+A D G
Sbjct: 983 YEKQQFYNLTVRAKDKG 999



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           +++   +K+G A +    +T+ + D ND+ P     +      ++      ++ + A+D 
Sbjct: 426 YKLEVSDKEGDAKA---QVTIGIEDANDHTPEFQEALYETFVNESVRVGTNVLTVSASDK 482

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
           D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G   
Sbjct: 483 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPY 539

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ 157
             ++ V V++ V   N  SP+F++
Sbjct: 540 RHESEVNVTIRVGNVNDNSPLFEK 563



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT + +  E    Y + +QAT+  G +S   + V +V
Sbjct: 1685 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIV 1743

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N   PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1744 -DENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1779



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D D G + EI YSI     +GL +F ID  SGVI     L       Y +TV 
Sbjct: 1045 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVITAADSLDRETTASYWLTVY 1102

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1103 ATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1136



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           +I    +G        + + + D+ND  P   P    + I ++   R  + ++ ATD D+
Sbjct: 111 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 170

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  Y  Y  +   L  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 171 GSNGEFYY--YFKNKVDL--FSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 222



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2345 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2404

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  +S
Sbjct: 2405 DSSDLDRLEYSI--LSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 2461

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2462 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2498



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 728 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYVLNIT 785

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +PVF Q++Y V++ E +SI + +  +
Sbjct: 786 IYDLGKPQKSSWRLLTVNV-EDANDNNPVFLQDSYSVSILESSSIGTEIIQV 836



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQ+ 
Sbjct: 403 FKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTI----GIEDANDHTPEFQEA 458

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+  V+E   + + V T++ S    G
Sbjct: 459 LYETFVNESVRVGTNVLTVSASDKDKG 485



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +++YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 2497 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2552

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2553 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2592


>gi|119582403|gb|EAW61999.1| hCG1982192, isoform CRA_n [Homo sapiens]
          Length = 824

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 19  FRFQVIAREKQGTAASVP-----VSLTVNLNDINDNAPRLPMIPPIQIQAGE-------- 65
            +FQV AR+     A VP     V+L V + D NDNAP L + P     AG         
Sbjct: 531 LQFQVSARD-----AGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWS 584

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             A   + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 585 VGAGHVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|431916497|gb|ELK16475.1| Protocadherin Fat 3 [Pteropus alecto]
          Length = 2947

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1346 IITTERLDRENPLEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1403

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+  TYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1404 RADVGRGHLVTQVQAIDPDDGANSRTTYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 1463

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   VSE  +I STV 
Sbjct: 1464 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTVSEDTAIGSTVD 1522

Query: 176  TITV 179
            T+ +
Sbjct: 1523 TLRI 1526



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+KI A D D+G N +I YS+Y    +G 
Sbjct: 1811 VTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKISAKDADIGSNGDIRYSLY---GSGH 1867

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F +DP SG ++T   L+  E+   YS+  +ATD GG+  Q+ V + ++   N   PVF
Sbjct: 1868 SEFFLDPESGELKTLA-LLDRERVPAYSLIARATDGGGRFCQSDVRL-ILEDVNDNPPVF 1925

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 1926 SSDHYNTCVYENTATKALLTRV 1947



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 311 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 368

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
             ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 369 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 426

Query: 118 AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q+ ++V+ATD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 427 TMGQFVLSVKATDQGSPSMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 485

Query: 176 TIT 178
            I+
Sbjct: 486 LIS 488



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 2007 GQALSSLTTVTITVLDINDNPPVFERRDYLVAVP----EDTSPGTQVLAVFATSKDIGTN 2062

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KFRI+P++G I  +  L     ++Y + V+A D G  +   +  
Sbjct: 2063 AEITYLIRSGNEQG--KFRINPKTGGISVSEVLDYELCKKYYLVVEAKDGGTPALSAVAT 2120

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE AS+  +V
Sbjct: 2121 VNINLTDVNDNPPKFSQDVYSAVISEDASVGDSV 2154



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 867  NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 921

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 922  GHFEINPNSGTVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 980

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E   +++++ +I
Sbjct: 981  DKPFYTASINEDIRMDTSILSI 1002



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVK 72
           K  F+V   +   +     + + V + D NDN P+ P     QI+  E  R+     I +
Sbjct: 13  KIHFEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYR 71

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A D D G NAEI+YSI   ++ G  KF IDP++G++ +  +  AG    +T++A D G
Sbjct: 72  AFAFDRDEGPNAEISYSIVDGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNG 129

Query: 133 ----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
                 +++  +E    P P+     F +  Y+  V E   +   V  ++V
Sbjct: 130 RPQKSSTARLHIEWIKKPPPSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 180



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 11/165 (6%)

Query: 18  KFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVK 72
            F F V  R+    Q TA S PV + + + D+NDN P     +   + +       +++K
Sbjct: 640 HFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYIGVEVLK 698

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
           + ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y + V+ +D G
Sbjct: 699 VSATDPDAEVPPELTYSLMEGS---LDHFLIDANSGVLTIKNNNLSKDHYVLIVKVSD-G 754

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              S ++V VSV    ++    F Q+ Y  ++SE  +  + VA +
Sbjct: 755 KFYSTSMVTVSVKEAMDS-GLHFTQSFYSTSISENNTNITKVAVV 798



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++Y+++  + +  + K
Sbjct: 246 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSVSMRK 302

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 303 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 362

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S V  +T
Sbjct: 363 PLYEASVFESAALGSAVLQVT 383



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 1893 YSLIARATDGGGRFCQSDVRLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 1952

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+G+N ++ YS+   +++    F ID  SG+I     L   +Q  Y+I+V+ATD      
Sbjct: 1953 DVGINRKVVYSL---ADSASGFFSIDGSSGIIILEHPLDREQQPSYNISVRATDQSPGQA 2009

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS T V ++V+   N   PVF++  Y V V E  S  + V  +
Sbjct: 2010 LSSLTTVTITVL-DINDNPPVFERRDYLVAVPEDTSPGTQVLAV 2052



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 16/176 (9%)

Query: 15   NPGKFRFQV---IAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQ 69
            NP  F F+V   I  +K     +V V + V   D+NDN P         I ++      +
Sbjct: 1570 NPA-FHFKVAATIPMDKVDIVFTVDVDIKVL--DLNDNKPVFETSSYETIIMEGMPVGTK 1626

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            + ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++ +
Sbjct: 1627 LTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPSFTFS 1686

Query: 126  VQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 1687 VVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAHEVYQGNVKESDPPGEVVAILS 1741



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 1059 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHY 1118

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V+ATD G    SS+ +V + 
Sbjct: 1119 QIVQDTYNSTDYFHIDSASGLI-LTARMLDYELVQHCTLKVRATDNGFPSLSSEVLVHI- 1176

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 1177 YISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 1213



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 90  IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           IY V +  +   F I+P SGV+ TT K +  E+   Y + VQAT+  G +S   V + +V
Sbjct: 496 IYEVKDGNIDGIFTINPYSGVV-TTRKALDYERTSTYQLIVQATNMAGMASNVTVNIQIV 554

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              N  +PVF  + Y  ++SE A +NS V ++  S L
Sbjct: 555 -DENDNAPVFLFSQYSGSLSEAAPVNSIVRSLDNSPL 590



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++DINDN P    +I    +     R   V  ++A+D 
Sbjct: 1156 LKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 1215

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + Y+I  +S      F +D RSGVI  +   K      YS+ V  +D G  +S
Sbjct: 1216 DSSDFDRLEYNI--LSGNDRTSFLMDSRSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTS 1272

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F QNTY   V E A+  + V
Sbjct: 1273 TAQVHIRVL-GANLYSPAFSQNTYVAEVRENAAAGTKV 1309



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID  +G I TT +L     + G+
Sbjct: 1305 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD 1361

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1362 -ISIFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1403


>gi|172046767|sp|Q8BNA6.2|FAT3_MOUSE RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
            homolog 3; Flags: Precursor
          Length = 4555

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2551 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2668

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   + S   V + V+P P T  P F Q+ Y   ++E  SI STV 
Sbjct: 2669 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLP-PETFLPSFTQSQYSFTITEDTSIGSTVD 2727

Query: 176  TITV 179
            T+ +
Sbjct: 2728 TLRI 2731



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  + 
Sbjct: 1574 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMA 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ TD G    S+  IV +S+    N+  P F    Y   V+E   I ++V 
Sbjct: 1632 AMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ D+NDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2072 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++   Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2127 GHFEINPNSGNVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E  ++N+ + +I
Sbjct: 2186 DKPFYTASINEDITMNTPILSI 2207



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       S+ + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   G+S
Sbjct: 3158 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 3214

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 3215 LSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3257



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LTVN+ D NDN P       +Q       +++     +I+++EA D DLG N E+ YS+ 
Sbjct: 816 LTVNVEDANDNNPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVMYSVL 870

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T  H+F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 871 ----TDTHQFIINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 926

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNRPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1354 PSPIPLTFDEPFYNFTVMESDKVTEIVGVVSV 1385



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V ++D+NDN+P    +      P  I +    + I+K+ A D D+G N +I YS+Y    
Sbjct: 3016 VTVSDVNDNSPVCDQVAYSASLPEDIPS---NKIILKVSAKDADIGSNGDIRYSLY---G 3069

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            +G ++F +DP SG ++T   L       Y++  +ATD GG+   + V + ++   N   P
Sbjct: 3070 SGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATDGGGRFCSSSV-LLLLEDVNDNPP 3128

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF  N Y   V E  +  + +  +
Sbjct: 3129 VFSSNHYTACVYENTATKALLTRV 3152



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            ++V ++ LDR+      +   V A ++  G + S   S+T+ + DINDN P       L 
Sbjct: 3185 VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYLV 3242

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KF I+P++G I    
Sbjct: 3243 TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFSINPKTGGISVLE 3296

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             L      ++ + V+A D G  +  T   VS+ +   N   P F Q+ Y   +SE A
Sbjct: 3297 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3353



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1837 NLDHEAI--AHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1893

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   +  F +DP +GV+      ++ + Y
Sbjct: 1894 PTYIGVEVLKVSATDPDSEVPPELTYSLMEGS---VDNFLMDPNTGVLTIKNNNLSKDHY 1950

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1951 MLIVRVSD--GKFYSTAMVTVMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 2003



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  +    + K
Sbjct: 1451 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDAVSMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FR+DP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1508 FRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSVVLQVT 1588



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRL--PMIPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYETIIMEGMPVG 2829

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
             ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 2830 TKLAQVRAIDMDWGANGQVTYSLH--SDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPA 2887

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +S  V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2888 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + ++DINDN P    P       ++      ++++ +TD D G N  + Y
Sbjct: 2264 TGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V ATD G    SS+ +V++ 
Sbjct: 2324 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 2381

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L + L+D+ND +P  +P    
Sbjct: 884  IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYS 941

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F +D  SG I  + +L 
Sbjct: 942  VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---RFEVDKASGAIRLSKELD 998

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 999  YEKQQFYNLTVRAKDKG 1015



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           +++   +K+G A +    +T+ + D ND+ P     +      ++      ++ + A+D 
Sbjct: 442 YKLEVSDKEGDAKA---QVTIGIEDANDHTPEFQEALYETFVNESVRVGTNVLTVSASDK 498

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
           D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G   
Sbjct: 499 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPY 555

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ 157
             ++ V V++ V   N  SP+F++
Sbjct: 556 RHESEVNVTIRVGNVNDNSPLFEK 579



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT + +  E    Y + +QAT+  G +S   + V +V
Sbjct: 1701 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIV 1759

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N   PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1760 -DENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1795



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D D G + EI YSI     +GL +F ID  SGVI     L       Y +TV 
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVITAADSLDRETTASYWLTVY 1118

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1119 ATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1152



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           +I    +G        + + + D+ND  P   P    + I ++   R  + ++ ATD D+
Sbjct: 127 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 186

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  Y  Y  +   L  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 187 GSNGEFYY--YFKNKVDL--FSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 238



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2361 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  +S
Sbjct: 2421 DSSDLDRLEYSI--LSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2514



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYVLNIT 801

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +PVF Q++Y V++ E +SI + +  +
Sbjct: 802 IYDLGKPQKSSWRLLTVNV-EDANDNNPVFLQDSYSVSILESSSIGTEIIQV 852



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQ+ 
Sbjct: 419 FKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTI----GIEDANDHTPEFQEA 474

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+  V+E   + + V T++ S    G
Sbjct: 475 LYETFVNESVRVGTNVLTVSASDKDKG 501



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +++YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 2513 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2568

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2569 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2608


>gi|124249105|ref|NP_001074283.1| protocadherin Fat 3 precursor [Mus musculus]
          Length = 4551

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 8/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2547 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2604

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2605 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2664

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                 S  V+A D G     +++ V + V  P T  P F Q+ Y   ++E  SI STV T
Sbjct: 2665 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTITEDTSIGSTVDT 2724

Query: 177  ITV 179
            + +
Sbjct: 2725 LRI 2727



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1512 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1569

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  + 
Sbjct: 1570 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMA 1627

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ TD G    S+  IV +S+    N+  P F    Y   V+E   I ++V 
Sbjct: 1628 AMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1686

Query: 176  TIT 178
             I+
Sbjct: 1687 LIS 1689



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ D+NDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2068 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2122

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++   Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2123 GHFEINPNSGNVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELPITI-VNKAMPVF 2181

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E  ++N+ + +I
Sbjct: 2182 DKPFYTASINEDITMNTPILSI 2203



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       S+ + L D+NDN P            +    +  + +++A D 
Sbjct: 3094 YNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   G+S
Sbjct: 3154 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 3210

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 3211 LSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3253



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LTVN+ D NDN P       +Q       +++     +I+++EA D DLG N E+ YS+ 
Sbjct: 812 LTVNVEDANDNNPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVMYSVL 866

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T  H+F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 867 ----TDTHQFIINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 922

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 923 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 953



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1233 IWVVVQVLDENDNRPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1291

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1292 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1349

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1350 PSPIPLTFDEPFYNFTVMESDKVTEIVGVVSV 1381



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V ++D+NDN+P    +      P  I +    + I+K+ A D D+G N +I YS+Y    
Sbjct: 3012 VTVSDVNDNSPVCDQVAYSASLPEDIPS---NKIILKVSAKDADIGSNGDIRYSLY---G 3065

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            +G ++F +DP SG ++T   L       Y++  +ATD GG+   + V + ++   N   P
Sbjct: 3066 SGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATDGGGRFCSSSV-LLLLEDVNDNPP 3124

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF  N Y   V E  +  + +  +
Sbjct: 3125 VFSSNHYTACVYENTATKALLTRV 3148



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            ++V ++ LDR+      +   V A ++  G + S   S+T+ + DINDN P       L 
Sbjct: 3181 VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYLV 3238

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KF I+P++G I    
Sbjct: 3239 TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFSINPKTGGISVLE 3292

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             L      ++ + V+A D G  +  T   VS+ +   N   P F Q+ Y   +SE A
Sbjct: 3293 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3349



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1833 NLDHEAI--AHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1889

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   +  F +DP +GV+      ++ + Y
Sbjct: 1890 PTYIGVEVLKVSATDPDSEVPPELTYSLMEGS---VDNFLMDPNTGVLTIKNNNLSKDHY 1946

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1947 MLIVRVSD--GKFYSTAMVTVMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 1999



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  +    + K
Sbjct: 1447 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDAVSMRK 1503

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FR+DP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1504 FRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1563

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1564 PLYEASVFESAALGSVVLQVT 1584



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRL--PMIPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 2774 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYETIIMEGMPVG 2825

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
             ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 2826 TKLAQVRAIDMDWGANGQVTYSLH--SDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPA 2883

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +S  V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2884 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2942



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + ++DINDN P    P       ++      ++++ +TD D G N  + Y
Sbjct: 2260 TGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRY 2319

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V ATD G    SS+ +V++ 
Sbjct: 2320 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 2377

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2378 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2414



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L + L+D+ND +P  +P    
Sbjct: 880  IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYS 937

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F +D  SG I  + +L 
Sbjct: 938  VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---RFEVDKASGAIRLSKELD 994

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 995  YEKQQFYNLTVRAKDKG 1011



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           +++   +K+G A +    +T+ + D ND+ P     +      ++      ++ + A+D 
Sbjct: 438 YKLEVSDKEGDAKA---QVTIGIEDANDHTPEFQEALYETFVNESVRVGTNVLTVSASDK 494

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
           D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G   
Sbjct: 495 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPY 551

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ 157
             ++ V V++ V   N  SP+F++
Sbjct: 552 RHESEVNVTIRVGNVNDNSPLFEK 575



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT + +  E    Y + +QAT+  G +S   + V +V
Sbjct: 1697 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIV 1755

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N   PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1756 -DENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1791



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D D G + EI YSI     +GL +F ID  SGVI     L       Y +TV 
Sbjct: 1057 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVITAADSLDRETTASYWLTVY 1114

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1115 ATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1148



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           +I    +G        + + + D+ND  P   P    + I ++   R  + ++ ATD D+
Sbjct: 123 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 182

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  Y  Y  +   L  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 183 GSNGEFYY--YFKNKVDL--FSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 234



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2357 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2416

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  +S
Sbjct: 2417 DSSDLDRLEYSI--LSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 2473

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2474 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2510



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 740 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYVLNIT 797

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +PVF Q++Y V++ E +SI + +  +
Sbjct: 798 IYDLGKPQKSSWRLLTVNV-EDANDNNPVFLQDSYSVSILESSSIGTEIIQV 848



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQ+ 
Sbjct: 415 FKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTI----GIEDANDHTPEFQEA 470

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+  V+E   + + V T++ S    G
Sbjct: 471 LYETFVNESVRVGTNVLTVSASDKDKG 497



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +++YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 2509 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2564

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2565 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2604


>gi|449276280|gb|EMC84894.1| Protocadherin-11 X-linked, partial [Columba livia]
          Length = 1012

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 14/188 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP    P+I     +      Q+ KI A
Sbjct: 431 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISA 490

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G NAEI+Y +    +     F +D R+G++    KL   +Q  YS TV A D G 
Sbjct: 491 TDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGM 547

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------C 186
              QT   V+V V   N  SP F  N Y+  V E   +  TV  ITV+   SG       
Sbjct: 548 PPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAAVTL 607

Query: 187 AIMNKEEN 194
           +I+N  +N
Sbjct: 608 SILNGRDN 615



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V + N+  D  + G + FQV A +      S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIRPNITFDREHQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P     G     + K+ A DND G+NAE+ YSI   ++ GL  F ID  +G I    
Sbjct: 683 ELVPTSASPGSV---VTKVFAVDNDTGMNAELRYSIIGGNSRGL--FTIDQLTGNITLKE 737

Query: 115 KLIAGEQ--YSITVQATDTGGKSS 136
           K+I  +   + + ++  D G   S
Sbjct: 738 KVITSDHGLHRLVIKVNDLGQPES 761



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 27/183 (14%)

Query: 22  QVIAREKQGT---------AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           Q++ RE++ T           S P S    L V + D+NDN P       I++   E   
Sbjct: 205 QILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKE-NDIEVSVPENAP 263

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
               + ++ ATD DLG NA+I +     +S+     F ID  +G+I     L   E   +
Sbjct: 264 VGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVH 323

Query: 123 SITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            +TV A+D     S+  V V+V      VP  +TR  +   N   V +SE A +N+ +A 
Sbjct: 324 KLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNG-TVLLSEKAPLNTKIAL 382

Query: 177 ITV 179
           ITV
Sbjct: 383 ITV 385



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  +E LDR+       +  V+A +  G++     ++TVN+ DINDN P +    +I P
Sbjct: 308 LITIREPLDRE--ESPVHKLTVLASD--GSSTPSRATVTVNVTDINDNVPSIDTRYIINP 363

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           +       +      +I  I   D D  +N ++T    H        FR+ P      ++
Sbjct: 364 VNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV-----PFRLKPVFDNQFLL 418

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           ET   L   A  +Y+I + A+D+G    +Q+ + +  +   N  +PVF Q    +++ E 
Sbjct: 419 ETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPEN 478

Query: 168 ASINSTVATITVSRLASG 185
            +  + +  I+ +   SG
Sbjct: 479 NAPGTQLTKISATDADSG 496



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+GVN    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK-- 180

Query: 95  NTGLHKFRIDPRSGVIET----------TGKLIAGEQ---YSITVQATDTGG--KSSQTI 139
             G + F +D    +IET            +++  EQ   Y + ++  D G   +SS  I
Sbjct: 181 --GQNVFGLD----IIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V+V    N   PVF++N  +V+V E A + ++V+ +
Sbjct: 235 LQVTVT-DVNDNRPVFKENDIEVSVPENAPVGTSVSQL 271


>gi|440902401|gb|ELR53198.1| Protocadherin alpha-C1, partial [Bos grunniens mutus]
          Length = 1024

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 14/166 (8%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-V 93
           V L + + D+NDNAP    +I  ++I        +V K+ ATD D G NA+ITYS    V
Sbjct: 214 VQLLITILDVNDNAPEFDQLIYKVRILENSLNGSLVIKLNATDPDDGTNADITYSFRRPV 273

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPN 149
           S   L+ F I+P SG I T GKL   E   Y I+V+A D G    +    + V +V   N
Sbjct: 274 SPAILYAFYINPDSGEIRTKGKLDFEENKLYEISVEAIDKGNIPMAGHCTILVEIV-DIN 332

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAIM 189
             +P     +  + V E A + + +A ++VS   SG      C++M
Sbjct: 333 DNAPEVTITSLALPVREDAQVGTVIALVSVSDRDSGANGQVTCSLM 378



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 21/189 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           +V ++ LDR+       R  + AR+    A S  V +T+ + D NDNAP          +
Sbjct: 509 LVLEKALDRE--QRATHRLVLTARDGGLPARSGEVQVTIVVVDANDNAPVFERSVYRTEV 566

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGK 115
           P    +       + +++A+D D G N EI YS+ + +   L H F + PR+G +     
Sbjct: 567 P----ETAPNGTVLFRVQASDPDEGSNGEIRYSLSNSTQAKLRHHFHVHPRNGEVRVAAS 622

Query: 116 LIAGEQ-YSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
           L + E      ++A D G  S    ++ +VEV+ V   N  +P     T    VSE A+ 
Sbjct: 623 LGSPETLLEAYIEARDEGAFSLASTAKLLVEVTDV---NDHAPEVNLLTLSSPVSEDAAT 679

Query: 171 NSTVATITV 179
            + +A + V
Sbjct: 680 GTVIALLNV 688



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 44/195 (22%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN-------DINDNAPRL 53
           Y +V    LDR+  +     ++V+   + G + S+ +S ++ L+       DINDN+P  
Sbjct: 393 YSIVLDSVLDRESAS----NYEVVVTARDGGSPSLRLSRSLELHKVHVHVLDINDNSPHF 448

Query: 54  PMIPPIQIQAGEARRQIVKI----------EATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           P        AG+ +  I +            A D D G N  ++YS+     +    FR+
Sbjct: 449 P--------AGDVQFHIPEFLMPGARFTLPNAEDADEGSNGLLSYSL-----SPSRHFRL 495

Query: 104 DPRSGVIET------TGKLIAGEQ---YSITVQATDTGGKSSQTIVEVS-VVPGPNTRSP 153
           D  S V  +        K +  EQ   + + + A D G  +    V+V+ VV   N  +P
Sbjct: 496 DMGSRVDGSEFPELVLEKALDREQRATHRLVLTARDGGLPARSGEVQVTIVVVDANDNAP 555

Query: 154 VFQQNTYDVNVSEGA 168
           VF+++ Y   V E A
Sbjct: 556 VFERSVYRTEVPETA 570



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 28/151 (18%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
           V + DINDN P  P          E+ ++I+  E            A+D D+GVN+ +TY
Sbjct: 109 VEVTDINDNPPVFP----------ESEKRIIIAESRPPETRFPLDGASDADIGVNSALTY 158

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            +    Y   +T   + ++   S V+  +      +++S+ + A+D G     + V++ +
Sbjct: 159 RVDPNDYFTLDTQNSREQMSSLSLVLRKSLDREEIQEHSLLLTASDGGKPELTSTVQLLI 218

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +   N  +P F Q  Y V + E  S+N ++
Sbjct: 219 TILDVNDNAPEFDQLIYKVRILEN-SLNGSL 248


>gi|301608219|ref|XP_002933688.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
           tropicalis]
          Length = 833

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D+NDN P        QI   E       ++ + A+D D G NA+ITYS  H+S      F
Sbjct: 223 DVNDNYPVFSQ-ETYQINLNENTPDNFVVLHLNASDEDEGSNAQITYSFSHISEDAGQLF 281

Query: 102 RIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           ++D ++G I   GKL     + Y ITV+A D GG ++ + V + +V   N  +P  Q N+
Sbjct: 282 KLDSKTGEITKIGKLDYETAKNYKITVEAKDGGGLAAHSKVLIQIVDS-NDNAPEIQINS 340

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
           +   + E +   + VA   +  L SG
Sbjct: 341 FTSIIPEDSPPGTIVALFNIQDLDSG 366



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 15/144 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI------- 70
           +F FQV+AR+      +  V++ + + D NDNAP++ + P +  +       I       
Sbjct: 516 EFSFQVMARDSGSPPLNSSVTVRICIVDRNDNAPKI-LYPSLDSERTALFEFIPRYSTKG 574

Query: 71  ---VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
               K+ A D D G NA ++Y    V    +  F I   +G I  +     +   +  I 
Sbjct: 575 YLVTKVIAVDADTGHNAWLSYHFLQVPEPSM--FTIGQHTGEIRISRDFQEVDSLKQKIV 632

Query: 126 VQATDTGGKSSQTIVEVSVVPGPN 149
           V   D G  S    V +++V   N
Sbjct: 633 VLVKDNGDPSLTATVALNLVIAEN 656


>gi|128485556|ref|NP_001076052.1| protocadherin alpha-2 precursor [Pan troglodytes]
 gi|62510902|sp|Q5DRF0.1|PCDA2_PANTR RecName: Full=Protocadherin alpha-2; Short=PCDH-alpha-2; Flags:
           Precursor
          Length = 948

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----------ARR 68
            +FQV AR+         V+L V + D NDNAP L + P     AG           A  
Sbjct: 531 LQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWSVGAGH 589

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 590 VVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPVFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 272


>gi|13111911|gb|AAH03126.1| Protocadherin alpha 2 [Homo sapiens]
          Length = 808

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 19  FRFQVIAREKQGTAASVP-----VSLTVNLNDINDNAPRLPMIPPIQIQAGE-------- 65
            +FQV AR+     A VP     V+L V + D NDNAP L + P     AG         
Sbjct: 531 LQFQVSARD-----AGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWS 584

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             A   + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 585 VGAGHVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|114602953|ref|XP_001168406.1| PREDICTED: protocadherin Fat 2 [Pan troglodytes]
          Length = 4349

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  + +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPVFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F IDP +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDPVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            ++    AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPRPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ VN+ D+N++ P+ P  P        +  G+    I+ + ATD D  +N++ITYS+  
Sbjct: 3306 TVMVNITDVNEHRPQFPQDPYSTRVLENVLVGDV---ILTVSATDEDGPLNSDITYSL-- 3360

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGP 148
            +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   
Sbjct: 3361 IGGNQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADV 3419

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P F Q  Y   V E + I S V  + +S
Sbjct: 3420 NDNPPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QI 70
            P +    V+ R+++       V +T+++ D N + PR   +     +A  A       ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQL---HYEASVADTIAPGTEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   ++ G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNINALLGIITLAQKLDQANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELRYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   Q  +  ++ E A + ++V  +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQL 1159



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V++
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVAD 1566



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++V V   +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQASTVVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N    Y IY ++      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENG---YVIYSIAGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    +   EVS+   +   N   P+F++     ++ +   +  ++ T++
Sbjct: 534 RASDWGSPFRRE-KEVSIFLQLRNLNDNQPMFEEVNCTGSIRQDWPVGKSIMTMS 587



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 31/160 (19%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVV 145
              ++E          Y++++ A+D+G   + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVI 1019



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + I+ + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  VS   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|441596469|ref|XP_004092945.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-2 [Nomascus
           leucogenys]
          Length = 824

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   +
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDM 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + VA ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVVALITVSDRDSG 380



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 19  FRFQVIAREKQGTAASVP-----VSLTVNLNDINDNAPRLPMIPPIQIQAGE-------- 65
            +FQV AR+     A VP     V+L V + D NDNAP L + P     AG         
Sbjct: 531 LQFQVSARD-----AGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWS 584

Query: 66  --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--Q 121
             A   + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L   +  +
Sbjct: 585 VGAGHVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRALEGADSPR 644

Query: 122 YSITVQATDTG 132
           + + V   D G
Sbjct: 645 HRLLVLVKDHG 655


>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
          Length = 4588

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       + +A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-FEVN 2604

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G    +   ++K+ A+D D G NA+ITY+I   S +      I+  SGVI T   LI  
Sbjct: 2605 IGSNAPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRASGVITTKESLIGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V V  P  R P F +  Y   VSE   I + +  
Sbjct: 2665 ENEVFTFFVRAVDNGSPQRESVVPVYVKVLPPEMRLPRFSEPFYTYTVSEDVPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3248 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  VS+ V   N  +PVF Q+TY   VSE A +  +V T+
Sbjct: 3306 EATDGGSPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITV 3357



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN P         
Sbjct: 2976 WKVYVKKPLDREERD--SYLLTITATD--GTFSSKAI-VEVKVLDANDNTPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T+ 
Sbjct: 3031 TIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTSA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y + V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQAAYHLLVKATDGGGRFCQASV-VLTLEDVNDNAPEFSADPYTITVFE 3136



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVLSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1607 G-NSFTIDPILGSIKTARELDRSNQVAYDLMVKATDKGDPPMSEITSVRVFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE   + S V  +T    +S
Sbjct: 1666 KFTSKEYSVEISETVGVGSFVGMVTAHSQSS 1696



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YHLLVKATDGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---- 132
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G    
Sbjct: 3153 DAGLNRKISYSLL---NSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRR 3209

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++ TIV +SV+   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTATGTIV-ISVL-DINDNPPVFEYREYGATVSEDILIGTEVLQV 3252



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN P+   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 911  VILKVSLDDVNDNPPKF--IPPNYRVKVREDLPEGTIIMWLEAHDPDLGQSSQVRYSLL- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 968  --DHGEGNFDVDKLSGAVRIIQQLDFEKKQVYNLTVRAKDKGKPISLSSTCYVEVEVIDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N   PVF        V E A + S+V  ++
Sbjct: 1026 NENLHPPVFPSFVEKGAVKENAPLGSSVMKVS 1057



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVN 83
            P+SL+      V + D+N+N    P + P  ++ G  +        ++K+ A D D+G +
Sbjct: 1009 PISLSSTCYVEVEVIDVNENLH--PPVFPSFVEKGAVKENAPLGSSVMKVSARDEDMGRD 1066

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
             EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV A+D G     + VE
Sbjct: 1067 GEIHYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVYASDQGVVPLSSFVE 1124

Query: 142  VSVV------PGPNTRSPVF 155
            V +         P T  PV+
Sbjct: 1125 VYIEVEDVNDNAPQTSEPVY 1144



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++++N+ DINDNAP         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGSPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I Y+I    N G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYAIID-GNQG-SPFTIDPARGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G     T   V++ V   N  +PVF +  Y + + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRENYSLIIQENKPMGFSVLQLVVT 3465



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I+ ++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGF--FSINSKTGLITTTARKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            F+F V+AR   G     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2774 FQFSVLARCTHGDYELVASVDVSIQVK--DANDNSPVLESSPYEAFIVENLPAGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ Y++    +   +  F ++  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDLDSGSNGQVMYNLDQSQSVDVIESFAVNMETGWITTLRELDHEKRDSYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G K   SS  IV+V+V    N   P F    Y   VSE       +A ++ +
Sbjct: 2892 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPPGGVIAIVSTT 2943



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQ 127
            +  + A D D     ++ YSI  +S      F ID ++G+I  +   +      YS+ V 
Sbjct: 2409 VTCVRAYDADSSDADKLEYSI--LSGNDHKNFVIDGKTGIITLSNLRRHALKPSYSLQVS 2466

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D   +SS   V V+V+ G N  SP+F QN Y+V ++E A +++ V  +  S   SG
Sbjct: 2467 ASDGVFRSSAQ-VHVTVIGG-NLHSPLFLQNEYEVELAENAPLHTLVTEVKASDGDSG 2522



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 20/163 (12%)

Query: 24   IAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVK-IEATDND 79
            + RE++  A +  V + V + D NDNAP    LP    +++ A  A  Q+++ + A D D
Sbjct: 2053 VTRERKPPAVA-HVIVKVVIEDQNDNAPVFVNLPYYALVKVDA--AVGQVIRHVTAVDRD 2109

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GK 134
             G N E+ YS+          F+I   SG I            ++Y ITV A D G    
Sbjct: 2110 SGRNGEVHYSL----KERHEHFQIG-SSGEISLKKPFEPDTLNKEYLITVVARDGGDPAF 2164

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S++ IV ++V+   N   PVF++  Y   + E A ++S V  +
Sbjct: 2165 SAEVIVPITVM---NKAMPVFEKPFYSAEIPENAQLHSPVVHV 2204



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  + YSI     
Sbjct: 808 LEIRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVRYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF ID  +GV++    L   E   + + V+A D   +  Q     I++VS +   N
Sbjct: 863 TDTDKFSIDSVTGVVKILNPLDREEHQVHYLKVEARDQAREEPQLLSTVILKVS-LDDVN 921

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 922 DNPPKFIPPNYRVKVRE 938



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P+ IQ  E +     ++ + ATD D G N ++ Y++   +      
Sbjct: 707 HSVNAHVPQFRSTLPVGIQVKENQPVGSSLLVMNATDLDTGFNGKLVYAVSGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  +G+++    L     ++Y++ +  +D G   +++  ++E+ V+   N   P F 
Sbjct: 765 FIMDMETGMLKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   INS +  +
Sbjct: 824 QESYFVEVSEDKEINSEIIQV 844



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+ T V V ++   N   PVF Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPIYTLTIQGTNMAGLSTNTTVLVHLL-DENDNLPVFVQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 124 EKNTNAEARTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 183

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             YS    ++     F I P SG I  TG+L   E   Y + + A D G K
Sbjct: 184 FYYSFKDRTDM----FAIHPTSGTIVLTGRLDYTETSVYEMEILAVDRGMK 230



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1529 ILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 19/159 (11%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+  Q   A            +V++ ATD D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFAQQSYATTLSEASVIGTSVVQVRATDADSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQT 138
             N  I+Y +    +     F +D  +G+I     L   +  Q+ I+V+A D G    S  
Sbjct: 2314 PNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDYEQFRQHQISVRAVDGGMPPLSSD 2373

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V    V   N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VVVTVDVTDLNDHPPLFDQQLYEARISEHAAHGHFVTCV 2412



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++A+D D G+   +TY I  V++    +F  + R G I T  KL     A +   I 
Sbjct: 2511 VTEVKASDGDSGIYGHVTYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVIPIR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              A D GGK +   + V ++   N  +P F+   ++VN+   A   ++V  +  S    G
Sbjct: 2568 FMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKFEVNIGSNAPKGTSVIKVLASDADEG 2626



 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSTSLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               ++V + ATD D    +++ YSI    N G  KF ++ ++G I          +Y +T
Sbjct: 1894 RGVKVVAVNATDADSSAFSQLLYSITE-GNIG-EKFLMNRKTGTITVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFASFAAVKINVKESKESQLK-FTQDFYSAVVKENSTEVRTLAVIT 2002


>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
 gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
          Length = 2799

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 21/177 (11%)

Query: 19   FRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            + FQV+A +          VPV +T+   D+NDN P     P     PI  QAG +   +
Sbjct: 1310 YEFQVVASDGGRYDARWKKVPVRITIT--DVNDNKPVFTSNPFFVQAPIYTQAGSS---L 1364

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQA 128
            +K+ ATD+D G N+EI YS   ++    +KF+I+P +G++   ++    +G+ + + + A
Sbjct: 1365 IKVTATDDDEGTNSEIVYSF--LNEPPNNKFKINPNTGLVTASSSLSSDSGKLFHLEILA 1422

Query: 129  TDTGG--KSSQTIVEVSVVPG--PNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             D G   KS + ++E+ +  G   N  +  FQ +TYDV + E  S +  +  ++  R
Sbjct: 1423 RDRGNPPKSGKGLLEIRIGNGNDNNNSALRFQNSTYDVTLLENTSGSKEILQVSAVR 1479



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 19/187 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREK-QGT---AASVPVSLTVNLNDINDNAPRL--PMI 56
           + +KE+LDR+     K  ++++A  + QG    ++ VPV + V   D+NDNAP L  P  
Sbjct: 589 IYAKESLDREK----KEIYELVAEARDQGVPPRSSRVPVRIIVT--DVNDNAPELLDPRE 642

Query: 57  PPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTG 114
             + ++  +    ++ KI+A D D G N+ ITYSI    ++ G   F IDP +G I T  
Sbjct: 643 DVVSVREEQPGGTEVTKIKAIDKDKGKNSTITYSILKGRDSDGYDLFTIDPITGSIRTRT 702

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            L   E+  Y + V ATD G    QTI  + V V+   + R P F  ++    V E   I
Sbjct: 703 TLDHEERSIYRLAVAATDGGKPPKQTIRLLRVEVLDLTDHR-PTFTSSSLVFKVKENVKI 761

Query: 171 NSTVATI 177
              V T+
Sbjct: 762 GYVVGTV 768



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 13/183 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            LV  K  LDR+  +   + F +   ++ G        LTVN+ D+ND+AP        PI
Sbjct: 1086 LVTIKSTLDRE--SRSVYTFPIYVTDETGKRQYDVTLLTVNVLDVNDHAPEFKQGSCYPI 1143

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +        I K+ A+D D GVN EITYSI    N G +KF ID  SG++  + + +  
Sbjct: 1144 HVPENTDLSAIHKVVASDLDEGVNGEITYSITS-GNIG-NKFSIDIHSGLL--SARPLDR 1199

Query: 120  E---QYSITVQATDTGGKSS-QTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E   +Y + + A D G  +S Q    ++ VV   N   P F Q  Y  ++ E    NS V
Sbjct: 1200 EVHSKYVLGITAQDRGNPTSLQGSCNITIVVDDENDNDPQFSQQKYTASIPEDILPNSDV 1259

Query: 175  ATI 177
             T+
Sbjct: 1260 LTV 1262



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 11/160 (6%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++L + + D+NDNAP           I++     QI+++ ATD D G NA ITY I  + 
Sbjct: 404 MTLIIEVQDVNDNAPIFERSEYYVNVIESLPINSQILQVAATDQDTGNNARITYRIKKII 463

Query: 95  NTGL------HKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-V 145
             G         F I P SG+I     L      +Y + + ATD G        ++ + V
Sbjct: 464 GNGTTGNVDDETFGIFPNSGLIYLKENLDRETINKYDVLITATDNGTPPLTATCKILITV 523

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   P FQ + Y+ ++ E    NS V  I+   L  G
Sbjct: 524 TDANDNDPKFQMDNYEFSIEENLPPNSPVGKISAVDLDYG 563



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 18/179 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGE---------ARR 68
           + F VIA ++ G + +  V +TV   D+ND+ P   P    + + +              
Sbjct: 59  YEFPVIASDRGGLSTTAIVKVTVT--DVNDHRPIFYPKEYNVSLSSNRKPTMMTSTSTTT 116

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK---LIAGEQYSIT 125
            IV + ATD D G   ++ Y I + ++  +  FRID ++G I    +   L+  E+  + 
Sbjct: 117 PIVAVVATDEDSGKFGDVRYRIVYGNDDNV--FRIDEKTGEIFLNNRGSILLLRERNKLN 174

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           V ATD  G  S    +V + V   N   PVF ++ Y+  + E +  NS V  +   +L+
Sbjct: 175 VSATDGDGLRSLQDAQVYITVSDSNRGPPVFDKSKYNFKILEDSKRNSIVGRVKAYQLS 233



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 11/170 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
            ++  +IA ++     +   +L VN+ D NDN P  P    I +  G      V    T N
Sbjct: 1631 YKLTIIATDEGNPQLTGTATLRVNIVDANDNQPTFPPHGVISVSEG-TEVGTVLTSVTAN 1689

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKS 135
            D+  N  +TY +   +N    +F ID  SG I   GK +  E   +Y++ + A+DT   +
Sbjct: 1690 DVDTNPTLTYFLTKETN----EFSIDRFSGKI-ILGKKLDYENKKEYNLAIMASDT-AHT 1743

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +QT + + V    N  +P F +  Y V +++G    + + T+  + L SG
Sbjct: 1744 AQTSLMIRVT-DVNDNAPSFSKPYYQVVLTDGPDHVTPLLTVNATDLDSG 1792



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 21/162 (12%)

Query: 39  LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH- 92
           + + + D+NDNAP        +  P  I+ G    Q     A D D G N  + YS+   
Sbjct: 295 VNIEIEDVNDNAPEFGSNNVRISVPEDIEPGTPLYQ---AHAIDKDSGENGVVRYSLLFG 351

Query: 93  ---VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVS 143
               S+T    F++D   G +  T +L     +++S+ + ATD+G      +   I+EV 
Sbjct: 352 KKSSSSTSKDFFKMDSILGHLTLTKRLDYEMNQRHSLVIVATDSGIPTLSSNMTLIIEVQ 411

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V   N  +P+F+++ Y VNV E   INS +  +  +   +G
Sbjct: 412 DV---NDNAPIFERSEYYVNVIESLPINSQILQVAATDQDTG 450



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 25/143 (17%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------ 55
           L+  KENLDR+  N  K+   + A +      +    + + + D NDN P+  M      
Sbjct: 484 LIYLKENLDRETIN--KYDVLITATDNGTPPLTATCKILITVTDANDNDPKFQMDNYEFS 541

Query: 56  ----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
               +PP           + KI A D D G N+ I YS    +N+    F+I+P +G I 
Sbjct: 542 IEENLPP--------NSPVGKISAVDLDYGQNSLIKYSFIPSNNS---SFKINPTTGDIY 590

Query: 112 TTGKLI--AGEQYSITVQATDTG 132
               L     E Y +  +A D G
Sbjct: 591 AKESLDREKKEIYELVAEARDQG 613



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPM------ 55
            ++S   LDR+  +  K+   + A+++   T+     ++T+ ++D NDN P+         
Sbjct: 1191 LLSARPLDREVHS--KYVLGITAQDRGNPTSLQGSCNITIVVDDENDNDPQFSQQKYTAS 1248

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            IP   +   +    ++ + A D D G+N++I YS+   +N     F+ID ++GVI T+G 
Sbjct: 1249 IPEDILPNSD----VLTVHAVDADTGINSKIFYSL---ANETHWLFKIDNKTGVISTSG- 1300

Query: 116  LIAGEQ---YSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDV 162
                E+   Y   V A+D GG+      +V V   +   N   PVF  N + V
Sbjct: 1301 FFDREKINVYEFQVVASD-GGRYDARWKKVPVRITITDVNDNKPVFTSNPFFV 1352



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 17/176 (9%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQ 69
            D  N  ++   ++A +   TA +   SL + + D+NDNAP    P    +     +    
Sbjct: 1724 DYENKKEYNLAIMASD---TAHTAQTSLMIRVTDVNDNAPSFSKPYYQVVLTDGPDHVTP 1780

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE----TTGKLIAGE---QY 122
            ++ + ATD D G NA+I YS+Y      +    ID   G+++    +  ++I  E     
Sbjct: 1781 LLTVNATDLDSGNNAKIKYSLYK----PVKGITIDGSKGILKANKTSLTEMIMTEGVKDI 1836

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + + A D G  S  ++  V + V       P F Q  + + + E +   S++  I
Sbjct: 1837 DLALVAEDYGMPSLSSLASVRIRVNNNRDFGPYFTQEEFQIRIREDSQRGSSLLKI 1892



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATD 130
           + A D+D GVNA++ Y++   S   L +F I   +G I    +L     + Y   V A+D
Sbjct: 9   VTANDSDCGVNAKVNYTLGEESGK-LKEFFIKSDTGEICIANELDYEKIKSYEFPVIASD 67

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
            GG S+  IV+V+V    N   P+F    Y+V++S
Sbjct: 68  RGGLSTTAIVKVTVT-DVNDHRPIFYPKEYNVSLS 101



 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+  +      + +         S  V++ + + D+NDN+P  P   PI I+  E   
Sbjct: 778 LDREKQSDYLLEVRALDTSATNNPQSSAVTIRIEIVDVNDNSPVWPE-NPITIELPEDTP 836

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
               I    A D D   N+++ YS+      +G   F +D  +G+I     L   +  +Y
Sbjct: 837 VSTVISNYSAFDADTSSNSDLRYSLLRCYPESGTKVFAVDMLTGIITLNSPLDYEQLTEY 896

Query: 123 SITVQATD 130
           ++ V ATD
Sbjct: 897 TLIVSATD 904


>gi|426350687|ref|XP_004042901.1| PREDICTED: protocadherin Fat 2 [Gorilla gorilla gorilla]
          Length = 4349

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  + +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F IDP +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDPVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            ++    AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPRPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ VN+ D+N++ P+ P  P        +  G+    I+ + ATD D  +N++ITYS+  
Sbjct: 3306 TVMVNITDVNEHRPQFPQDPYSTRVLENVLVGDV---ILTVSATDEDGPLNSDITYSL-- 3360

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGP 148
            +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   
Sbjct: 3361 IGGNQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADV 3419

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P F Q  Y   V E + I S V  + +S
Sbjct: 3420 NDNPPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QI 70
            P +    V+ R+++       V +T+++ D N + PR   +     +A  A       ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQL---HYEASVADTIAPGTEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D G NAE+ YS+   ++ G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGFNAEVHYSLLKGNSEGF--FNINALLGIITLAQKLDQANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   Q  +  ++ E A + ++V  +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQL 1159



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPSKGHQ 904



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL       Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLSSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V++
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVAD 1566



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   P+F    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLS 1256



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 27/126 (21%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A+++ V   +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQASTMVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTG 132
           +A+D G
Sbjct: 534 RASDWG 539



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 31/160 (19%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPQYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVV 145
              ++E          Y++++ A+D+G   + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVI 1019



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + I+ + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  VS   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|395736272|ref|XP_003776724.1| PREDICTED: protocadherin beta-13 [Pongo abelii]
          Length = 781

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDADTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
          Length = 4974

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 12/184 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGE 65
            ++LDR+     K  +++  R   G   +  V LTV + D NDN P  L       I    
Sbjct: 1792 DSLDRET----KDVYKLTVRASDGNQHTDTV-LTVQITDTNDNPPAFLETAYSFDIPENA 1846

Query: 66   AR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
             R  ++ +++A D DLG+NA++TYS+  +S+     F ++P++GV   T +L   E   Y
Sbjct: 1847 QRGHKVGQVKAVDADLGINAQLTYSV--ISDWANDVFSLNPQTGVFTLTSRLDYEEVQHY 1904

Query: 123  SITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             + VQA D G  + S T+     V   N  +P+F   +Y   + E  SI + + T++ + 
Sbjct: 1905 ILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSYTNEIFENVSIATPIVTVSATD 1964

Query: 182  LASG 185
            L SG
Sbjct: 1965 LDSG 1968



 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   ++A +      S    +TVN+ D N+NAP+      + P+   A E +  ++K+ A
Sbjct: 2963 YSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEYLSPVPDDAQEGQL-LLKVTA 3021

Query: 76   TDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGG 133
             D  D GVNAEI Y I  V   G   F ID  +G I  T  +   G++Y + V+A D G 
Sbjct: 3022 KDKLDFGVNAEINYVI--VGGNGSENFAIDKYNGWITLTKPVTEIGQEYLLRVRAIDKGV 3079

Query: 134  KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V V+ VV G N   PVF   +Y V V E   + ST+ T+  S
Sbjct: 3080 PPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNAS 3127



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 18/147 (12%)

Query: 19   FRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVK 72
            + F V+A++   T   +  V+LT+ + D NDN+P             + +AGE    +  
Sbjct: 2437 YYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEVNISDKTKAGEF---VFG 2493

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
              A+D+D+G+N++I+Y++     TG H   F I+P +GVI+    L  +  + +++ ++A
Sbjct: 2494 ARASDDDIGINSKISYAL-----TGEHAPNFTINPETGVIKAAQDLAKLGTKVFNLEIEA 2548

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             D G K  +T  E+ V   P+   P F
Sbjct: 2549 ADGGKKPRKTSTELRVFLRPDHLFPSF 2575



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 9/174 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
           K+   V+A +K     +    L +++ND+ND+ P         I  +   +   +  I A
Sbjct: 433 KYNLTVVATDKGTPPRTATAFLIIHVNDVNDHEPVFEKSEYSAILSELAPSGTYVAGITA 492

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTG- 132
           TD D GVNA+I Y+   VS      F I+  +G+I T   L    Q ++   + A D G 
Sbjct: 493 TDEDSGVNAQIYYAF--VSGNEHQWFSINSDTGLITTRDILDREVQGTVELNISARDGGP 550

Query: 133 -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             K + T ++V+++   N  +P F Q+ ++V++SE A   + +A +T S    G
Sbjct: 551 NPKWAYTQLKVTIL-DENDEAPRFSQSKFNVSLSENAPPGTLIAMLTASDHDQG 603



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQ---GTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            V++K+ LDR+    G +   V A ++        S  V +T+ L D+ND +P    + P 
Sbjct: 1994 VITKKELDRE--RQGLYNLVVTATDQAKPPDQRLSSTVQVTIILKDVNDMSPEF--VTPN 2049

Query: 60   QIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            +    E       ++ ++A D D G N  I YS+   S +    F + P  G++  +G++
Sbjct: 2050 ETSVAENIAINTVVMAVKAIDKDEGRNGYIEYSLSPDSASS-GTFSLGPVDGLLRVSGRI 2108

Query: 117  I--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                   Y++++ A D G     T  ++ V +   N  SPVF    Y  +++E ASI ++
Sbjct: 2109 DRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQYSASIAENASIGAS 2168

Query: 174  VATITVSRLASG 185
            V  ++ + +  G
Sbjct: 2169 VLQVSATDVDDG 2180



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 16/149 (10%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L V++N +N+  PR   P+      ++ E   Q+  ++ATD D G + ++ Y     SN 
Sbjct: 3297 LRVHINGVNEYYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSND 3356

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG------KSSQTIVEVSVVPGP 148
                F I+  SGVI  +  L    Q  I  T+ A + GG        +Q IVEV     P
Sbjct: 3357 --RGFNINSESGVISVSRSLDRETQSRIVLTIMAKNAGGIRGNDTDEAQVIVEVQDGNDP 3414

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
                P F Q  Y+V +SEGA + S V  +
Sbjct: 3415 ----PEFLQTLYEVEISEGAPVGSKVTAV 3439



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEA 75
            +   V+AR+  Q    S   +++V + D NDN+P           I+      ++++  A
Sbjct: 1269 YLLTVVARDAGQMRQLSSTTTVSVEVMDENDNSPEFTQTNSKISVIETTPVNTELIQFRA 1328

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
            TD DLG+N+E+ +SI    + G  K  F +DP SG +     L   E   Y + + A+D 
Sbjct: 1329 TDADLGMNSEVVFSI----SAGNRKDTFHVDPSSGTLYLHKPLDYEELSAYQLNITASDN 1384

Query: 132  GG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            G  + S TI+    V   N   P F        + EG S+++ + T+T
Sbjct: 1385 GNPRLSTTILFAIAVEDANDNPPSFPSTAIVRQIREGISVHTPIVTVT 1432



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            ++ V + D NDN PR   +  + + +  +    ++++ ++D D+G NA  TYS     N 
Sbjct: 2771 TVLVTVLDKNDNPPRFSRLFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSF--TENP 2828

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G  KF+IDP SG +   G L   +Q  Y + V A D G   ++T + ++ +   N  +P 
Sbjct: 2829 G-EKFKIDPISGNVTVVGHLDREQQDEYLLKVAAVD-GAWKAETPLTIT-IQDQNDNAPE 2885

Query: 155  FQQNTYDVNVSE 166
            F+ + Y  N  E
Sbjct: 2886 FEHSFYSFNFPE 2897



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PI 59
            +L V +++LDR+  +   +   V A +    + S  V + +++ D NDN+P         
Sbjct: 1040 FLYV-RQSLDRE--DKDYYSLSVTASDLGNPSRSSVVPVVIHVIDENDNSPEFTNASFSF 1096

Query: 60   QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
             I+  E     V K+ ATD D+G NAE+ +S+   SN+    F IDP++G I+T      
Sbjct: 1097 NIRENEPPDSFVGKLTATDRDIGRNAELIFSL---SNSQ-SDFVIDPKNGFIKTLHVFDR 1152

Query: 117  -----IAGEQY-SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
                   G  Y S+    TD G    +  V+V+V V   N   P F +  Y V VSEG+ 
Sbjct: 1153 EELVQTTGLNYLSLEATVTDNGSPRLRDKVKVNVYVTDVNDNPPKFLRTPYRVQVSEGSP 1212

Query: 170  INSTVATITVSRLASG 185
            + + V  +  S    G
Sbjct: 1213 VGTQVIRLFTSDADEG 1228



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
            + LT+N+ D NDN+P     +    I   E+  Q +VK+ A D D G N ++TY +   +
Sbjct: 2666 LQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYKL---T 2722

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-GKSSQTIVEVSVVPGPNTR 151
            +     F ID  SG I T  +L   E   Y +TV+A D G  + + T   +  V   N  
Sbjct: 2723 DDFDGTFEIDSESGEIYTNARLDREETPAYELTVEALDQGVPQMTGTATVLVTVLDKNDN 2782

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F +  + VNV+E A + S V  +T S
Sbjct: 2783 PPRFSR-LFSVNVTENADLGSFVIQVTSS 2810



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 14/173 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PM----IP 57
           + +++ LDR+      +   VIA+++     S   ++ +N+ D+NDN+P   P+      
Sbjct: 633 LTTRKKLDRE--EISHYEIHVIAKDQGLPPQSSTATVYLNVIDVNDNSPEFYPLNYFVAV 690

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P  ++ G +   +VK+ A+D D G NA ITY++    + G   F ID  +GVI   G L 
Sbjct: 691 PENVKPGSS---LVKVTASDRDEGENAIITYNL---ESGGDDLFTIDEWTGVITIRGDLK 744

Query: 118 AGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             +  + + + A D G K +     V ++   +    +F    Y+  + E  S
Sbjct: 745 WTKPIHRLKISAKDHGDKRAAEDATVEIIKERDLEELLFDNYGYEFKIVEDDS 797



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 14/147 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
            V + V + D+NDN P+  +  P ++Q  E      Q++++  +D D G+N ++ YSI   
Sbjct: 1182 VKVNVYVTDVNDNPPKF-LRTPYRVQVSEGSPVGTQVIRLFTSDADEGLNGDVFYSIVQG 1240

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK---SSQTIVEVSVVPG 147
            ++ G  +F I+  +G I    K++  E    Y +TV A D G     SS T V V V+  
Sbjct: 1241 NDDG--RFTIEEATGQI-ILSKILDRETVSNYLLTVVARDAGQMRQLSSTTTVSVEVM-D 1296

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q    ++V E   +N+ +
Sbjct: 1297 ENDNSPEFTQTNSKISVIETTPVNTEL 1323



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 22/186 (11%)

Query: 16  PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--------PMIPPIQIQAGEAR 67
           P    F V AR+           +TVNL D ND+ P +         M   +   AG   
Sbjct: 319 PKSCVFTVFARDHGSPRQDGRTYVTVNLVDANDHDPVIKFRYFPFNAMFATVDENAGNGS 378

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--QYS 123
                     ++ G+N E T  I  VS   L+ FR+D  P   ++   G L   E  +Y+
Sbjct: 379 VVAAVSVVDSDE-GLNGETTVRI--VSGNELNHFRLDYTPSFDIVRVNGVLDREEISKYN 435

Query: 124 ITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +TV ATD G      ++  I+ V+ V   N   PVF+++ Y   +SE A   + VA IT 
Sbjct: 436 LTVVATDKGTPPRTATAFLIIHVNDV---NDHEPVFEKSEYSAILSELAPSGTYVAGITA 492

Query: 180 SRLASG 185
           +   SG
Sbjct: 493 TDEDSG 498



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            +V   ATD D+G+NA+I YS+       + +F+ID  +G+I T+  L   E   Y  TV 
Sbjct: 2386 VVTPTATDKDIGLNAKIRYSLL---GDKVDRFKIDQDAGIITTSAILDREETEIYYFTVM 2442

Query: 128  ATDTGGKSSQ-TIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            A D      +   V +++ V   N  SP F    Y+VN+S+
Sbjct: 2443 AQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEVNISD 2483



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 26/178 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V+ +ENL  D       R+ ++    Q T    P+ + + + DINDN P  P  P I + 
Sbjct: 89  VLDRENLKND-------RYDLVVLSSQPT---YPIEVRILVLDINDNPPEFPE-PSISVS 137

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR----IDPRSGV----IE 111
             E   A  +++   ATD D+G N  ++     +      KFR    ++P        +E
Sbjct: 138 FSESAAAGTRLLLDAATDKDIGTNG-VSDDYRIIDGNKDDKFRLALTVNPAGETSYLHLE 196

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           TTGKL    Q  Y + + A D G       ++V+V +   N   P+F  + Y V+++E
Sbjct: 197 TTGKLDRESQGFYFLNISARDGGAPPKFGYLQVNVTILDVNDNPPIFDHSDYIVSLNE 254



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 25/172 (14%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA-- 66
           LDR+  + G +   + AR+         + + V + D+NDN P       I +   E+  
Sbjct: 201 LDRE--SQGFYFLNISARDGGAPPKFGYLQVNVTILDVNDNPPIFDHSDYI-VSLNESVL 257

Query: 67  -RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS-- 123
               ++++ ATDNDLG NA+IT   Y++++T   +F +DP +GVI TT  L   +Q    
Sbjct: 258 PGTPVLQVMATDNDLGDNAKIT---YYLADTE-RQFTVDPETGVISTTETLECPQQNCPQ 313

Query: 124 ----------ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
                      TV A D G   +  +T V V++V   N   PV +   +  N
Sbjct: 314 TTKSCPKSCVFTVFARDHGSPRQDGRTYVTVNLVDA-NDHDPVIKFRYFPFN 364



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 41   VNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+ND+ P           +++     +   + A+D DLG+N  I+Y I   +  G 
Sbjct: 973  VVIEDVNDHTPVFDHTSYETSLLESTPVNERFFALAASDTDLGLNGRISYVISEGNTEG- 1031

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             KF I P  G +     L   ++  YS++V A+D G  S  ++V V + V   N  SP F
Sbjct: 1032 -KFGIFP-DGFLYVRQSLDREDKDYYSLSVTASDLGNPSRSSVVPVVIHVIDENDNSPEF 1089

Query: 156  QQNTYDVNVSEGASINSTVATITVS 180
               ++  N+ E    +S V  +T +
Sbjct: 1090 TNASFSFNIRENEPPDSFVGKLTAT 1114



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 10/142 (7%)

Query: 45   DINDNAPRLPMIP-PIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D+NDN P        +++    A  Q V +  A D D G+N+ +TY   H++     +FR
Sbjct: 873  DLNDNKPVFDRDKDEVKLAENAAVGQEVYLARARDLDAGINSRVTY---HLNYNPDDQFR 929

Query: 103  IDPRSGVIETTGKLIAGEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQN 158
            I   +GVI     + A    S+ V+ T + G     SS+ +V V V+   N  +PVF   
Sbjct: 930  ISEATGVIYLNRPIRAEPGLSLHVEVTASDGGEPPLSSKQLVRV-VIEDVNDHTPVFDHT 988

Query: 159  TYDVNVSEGASINSTVATITVS 180
            +Y+ ++ E   +N     +  S
Sbjct: 989  SYETSLLESTPVNERFFALAAS 1010



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 8/106 (7%)

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTI 139
           N ++TYSI  V     H F ID R+G I TT K I  EQ   YS+T+ A   G    +T+
Sbjct: 811 NTDVTYSI--VYGDPEHSFDIDERTGKI-TTAKKIDREQTLMYSLTITAR-VGLAYGKTL 866

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V V VV   N   PVF ++  +V ++E A++   V       L +G
Sbjct: 867 VNV-VVLDLNDNKPVFDRDKDEVKLAENAAVGQEVYLARARDLDAG 911



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
            I+ + A+D+D G N  I Y I         +F +DP SG +     L     ++Y + + 
Sbjct: 3121 ILTVNASDDDQGPNGMIRYKI--SGGNERKEFAVDPYSGAVTILQPLDYDTIQEYHLNIT 3178

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            A D G K   T   +++ +   N  SP F Q+ Y+  +SE    NS V  +  + + S
Sbjct: 3179 AEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISENLPPNSFVFQVKATDIDS 3236



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 12/192 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +++ LDR+    G     + AR+           L V + D ND APR        +
Sbjct: 524 LITTRDILDREVQ--GTVELNISARDGGPNPKWAYTQLKVTILDENDEAPRFSQ-SKFNV 580

Query: 62  QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI 117
              E       I  + A+D+D G N  + YS++ V+         +D  +G + T  KL 
Sbjct: 581 SLSENAPPGTLIAMLTASDHDQGTNGSVAYSLHPVTQQHYDNVLVLDSLTGQLTTRKKLD 640

Query: 118 AGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             E   Y I V A D G   +SS   V ++V+   N  SP F    Y V V E     S+
Sbjct: 641 REEISHYEIHVIAKDQGLPPQSSTATVYLNVI-DVNDNSPEFYPLNYFVAVPENVKPGSS 699

Query: 174 VATITVSRLASG 185
           +  +T S    G
Sbjct: 700 LVKVTASDRDEG 711



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 25/183 (13%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEAT 76
            ++  + A +      S  +   + + D NDN P  P    + QI+ G      IV + A 
Sbjct: 1375 YQLNITASDNGNPRLSTTILFAIAVEDANDNPPSFPSTAIVRQIREGISVHTPIVTVTAD 1434

Query: 77   DNDLGVNAEITYSIYHV--SNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATD-- 130
            D D G+N ++TY+I      ++  H F I+P +GVI T   +     + + +TV ATD  
Sbjct: 1435 DPDYGINGKVTYAISQQEPEDSNRH-FGINPVTGVIHTLLPIDRETIDTFRLTVVATDEA 1493

Query: 131  ---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
               +   S+  +V V +V   N  +PVF             S+NS +          G  
Sbjct: 1494 QPASARLSANKLVTV-IVEDVNDNAPVF------------VSMNSAILPQNTQFPKEGAL 1540

Query: 188  IMN 190
            IMN
Sbjct: 1541 IMN 1543



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 24/181 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEAR 67
            ++   + A +      S    LT+ L DINDN+P              +PP         
Sbjct: 3172 EYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISENLPPNSF------ 3225

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              + +++ATD D   NA I YSI    +  +  F ID ++G +         E   Y+I 
Sbjct: 3226 --VFQVKATDIDSPKNAIIQYSISDGPDKDM--FAIDQKTGRVTAKYSFDYEENDLYTIN 3281

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            + A++        I E+ V + G N   P F Q  +  +VSE A + + V T+  +   +
Sbjct: 3282 IVASNPDSPMFG-IAELRVHINGVNEYYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDA 3340

Query: 185  G 185
            G
Sbjct: 3341 G 3341



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 28/166 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++     +    + V + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2116 YTLSITARDRGDPPRATHTKIFVRILDENDNSP---VFDPKQYSASIAENASIGASVLQV 2172

Query: 74   EATDNDLGVNAEITYSIYHVSNTGL--HKFRIDPRSGVIETTGKL--IAGEQYSITVQAT 129
             ATD D G+N  + YSI    N+G     F I   +GV+     L      +Y +TV+A 
Sbjct: 2173 SATDVDDGLNGRVRYSI----NSGDTNRDFSIAEDTGVVRVAKNLNYERKSRYVLTVRAE 2228

Query: 130  DTGG---------KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            D  G          +++ ++ VS +   N   P F  + Y   V E
Sbjct: 2229 DCAGDVGGEVVRADTAEIVISVSDI---NDNPPTFLDSPYLAYVME 2271



 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKIEATDNDLGVN-AEITYSIYHVSN 95
            ++ +++ DINDN P   P +    ++      +I+ + A D DL  N A  TY +     
Sbjct: 3508 TVKIHITDINDNGPTFDPRVVGKVLENEPPNTKIMTLSAKDPDLPPNGAPFTYKLI---- 3563

Query: 96   TGLHK--FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTIVEVSVV 145
             G H+   +ID  SGV+ TT K+I  E   Q  I V+  D+G     SQ ++ + V+
Sbjct: 3564 GGKHRDFVKIDKHSGVVVTT-KMIDREVIPQLEILVEVEDSGSPKMKSQHVITIEVL 3619



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
            E  + + + +AT    G  + + Y+I    N G     +D  +G +   G+ +  E    
Sbjct: 2590 EHGKLVARFKATSPKKGAASNVRYAIAG-GNIG-EALTMDKNTGEVHVAGRGLDYETLPV 2647

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y + ++A D+     +T++++++ V   N  SPVF  N Y+ ++ E  S    V  ++  
Sbjct: 2648 YEVWIEAKDSDVPPLRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAE 2707

Query: 181  RLASG 185
             L SG
Sbjct: 2708 DLDSG 2712


>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
 gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
            Full=Cadherin family member 8; AltName: Full=Multiple
            epidermal growth factor-like domains protein 1;
            Short=Multiple EGF-like domains protein 1; Flags:
            Precursor
          Length = 4349

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  + +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  +  
Sbjct: 3306 TVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--IGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + PR   +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   ++ G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNINALLGIITLAQKLDQANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATIT 178
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  ++
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVS 1683



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F ID  +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDLVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            ++    AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPWPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   Q  +  ++ E A + ++V  +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQL 1159



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             F  +V A +K     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2344 HFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA 2403

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
             D D    + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 2404 IDPDSRDTSRLEYLI--LSGNQDRHFFINSSSGIISMFNLCKKHLDSSYNLRVGASD--G 2459

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                T+         N  SP FQQ+ Y+  ++E A + + V
Sbjct: 2460 VFRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKV 2500



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPD 1566



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 27/126 (21%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++V V   +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQASTVVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTG 132
           +A+D G
Sbjct: 534 RASDWG 539



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   +  G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNYMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   P+F    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLS 1256



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 33/161 (20%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV 145
              ++E          Y++++ A+D GG+  + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASD-GGRPLARRTLCHVEVI 1019



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + I+ + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  VS   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|397517685|ref|XP_003829037.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Pan paniscus]
          Length = 4349

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  + +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKEEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPVFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F IDP +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDPVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            ++    AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPRPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QI 70
            P +    V+ R+++       V +T+++ D N + PR   +     +A  A       ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQL---HYEASVADTIAPGTEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   ++ G   F ID   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNIDALLGIITLAQKLDQANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  + VS ++S
Sbjct: 1633 EDRGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPI--LLVSAMSS 1687



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ VN+ D+N++ P  P  P        +  G+    I+ + ATD D  +N++ITYS+  
Sbjct: 3306 TVMVNITDVNEHRPHFPQDPYSTRVLENVLVGDV---ILTVSATDEDGPLNSDITYSL-- 3360

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGP 148
            +    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   
Sbjct: 3361 IGGNQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADV 3419

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P F Q  Y   V E + I S V  + +S
Sbjct: 3420 NDNPPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   Q  +   + E A + ++V  +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPCIQEDAPVGTSVLQL 1159



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V++
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVAD 1566



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCMVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPCIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     E++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FMIHPVTGLLSTAQQLDRENKEEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   PVF    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A+++ V   +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQASTMVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    +   EVS+   +   N   P+F++     ++ +   +  ++ T++
Sbjct: 534 RASDWGSPFRRE-KEVSIFLQLRNLNDNQPMFEEVNCTGSIRQDWPVGKSIMTMS 587



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 31/160 (19%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVV 145
              ++E          Y++++ A+D+G   + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVI 1019



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + I+ + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  VS   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
          Length = 3284

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 12/184 (6%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGE 65
           ++LDR+     K  +++  R   G   +  V LTV + D NDN P  L       I    
Sbjct: 102 DSLDRET----KDVYKLTVRASDGNQHTDTV-LTVQITDTNDNPPAFLETAYSFDIPENA 156

Query: 66  AR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
            R  ++ +++A D DLG+NA++TYS+  +S+     F ++P++GV   T +L   E   Y
Sbjct: 157 QRGHKVGQVKAVDADLGINAQLTYSV--ISDWANDVFSLNPQTGVFTLTSRLDYEEVQHY 214

Query: 123 SITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
            + VQA D G  + S T+     V   N  +P+F   +Y   + E  SI + + T++ + 
Sbjct: 215 ILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSYTNEIFENVSIATPIVTVSATD 274

Query: 182 LASG 185
           L SG
Sbjct: 275 LDSG 278



 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   ++A +      S    +TVN+ D N+NAP+      + P+   A E +  ++K+ A
Sbjct: 1273 YSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEYLSPVPDDAQEGQL-LLKVTA 1331

Query: 76   TDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGG 133
             D  D GVNAEI Y I  V   G   F ID  +G I  T  +   G++Y + V+A D G 
Sbjct: 1332 KDKLDFGVNAEINYVI--VGGNGSENFAIDKYNGWITLTKPVTEIGQEYLLRVRAIDKGV 1389

Query: 134  KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V V+ VV G N   PVF   +Y V V E   + ST+ T+  S
Sbjct: 1390 PPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNAS 1437



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 18/147 (12%)

Query: 19  FRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVK 72
           + F V+A++   T   +  V+LT+ + D NDN+P             + +AGE    +  
Sbjct: 747 YYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEVNISDKTKAGEF---VFG 803

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
             A+D+D+G+N++I+Y++     TG H   F I+P +GVI+    L  +  + +++ ++A
Sbjct: 804 ARASDDDIGINSKISYAL-----TGEHAPNFTINPETGVIKAAQDLAKLGTKVFNLEIEA 858

Query: 129 TDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            D G K  +T  E+ V   P+   P F
Sbjct: 859 ADGGKKPRKTSTELRVFLRPDHLFPSF 885



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 16/149 (10%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L V++N +N+  PR   P+      ++ E   Q+  ++ATD D G + ++ Y     SN 
Sbjct: 1607 LRVHINGVNEYYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSND 1666

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG------KSSQTIVEVSVVPGP 148
                F I+  SGVI  +  L    Q  I  T+ A + GG        +Q IVEV     P
Sbjct: 1667 --RGFNINSESGVISVSRSLDRETQSRIVLTIMAKNAGGIRGNDTDEAQVIVEVQDGNDP 1724

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
                P F Q  Y+V +SEGA + S V  +
Sbjct: 1725 ----PEFLQTLYEVEISEGAPVGSKVTAV 1749



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQ---GTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
           V++K+ LDR+    G +   V A ++        S  V +T+ L D+ND +P    + P 
Sbjct: 304 VITKKELDRE--RQGLYNLVVTATDQAKPPDQRLSSTVQVTIILKDVNDMSPEF--VTPN 359

Query: 60  QIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           +    E       ++ ++A D D G N  I YS+   S +    F + P  G++  +G++
Sbjct: 360 ETSVAENIAINTVVMAVKAIDKDEGRNGYIEYSLSPDSASS-GTFSLGPVDGLLRVSGRI 418

Query: 117 I--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  Y++++ A D G     T  ++ V +   N  SPVF    Y  +++E ASI ++
Sbjct: 419 DRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQYSASIAENASIGAS 478

Query: 174 VATITVSRLASG 185
           V  ++ + +  G
Sbjct: 479 VLQVSATDVDDG 490



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            ++ V + D NDN PR   +  + + +  +    ++++ ++D D+G NA  TYS     N 
Sbjct: 1081 TVLVTVLDKNDNPPRFSRLFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSF--TENP 1138

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G  KF+IDP SG +   G L   +Q  Y + V A D G   ++T + ++ +   N  +P 
Sbjct: 1139 G-EKFKIDPISGNVTVVGHLDREQQDEYLLKVAAVD-GAWKAETPLTIT-IQDQNDNAPE 1195

Query: 155  FQQNTYDVNVSE 166
            F+ + Y  N  E
Sbjct: 1196 FEHSFYSFNFPE 1207



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
            + LT+N+ D NDN+P     +    I   E+  Q +VK+ A D D G N ++TY +   +
Sbjct: 976  LQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYKL---T 1032

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-GKSSQTIVEVSVVPGPNTR 151
            +     F ID  SG I T  +L   E   Y +TV+A D G  + + T   +  V   N  
Sbjct: 1033 DDFDGTFEIDSESGEIYTNARLDREETPAYELTVEALDQGVPQMTGTATVLVTVLDKNDN 1092

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F +  + VNV+E A + S V  +T S
Sbjct: 1093 PPRFSR-LFSVNVTENADLGSFVIQVTSS 1120



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V   ATD D+G+NA+I YS+       + +F+ID  +G+I T+  L   E   Y  TV 
Sbjct: 696 VVTPTATDKDIGLNAKIRYSLL---GDKVDRFKIDQDAGIITTSAILDREETEIYYFTVM 752

Query: 128 ATDTGGKSSQ-TIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           A D      +   V +++ V   N  SP F    Y+VN+S+
Sbjct: 753 AQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEVNISD 793



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
            I+ + A+D+D G N  I Y I         +F +DP SG +     L     ++Y + + 
Sbjct: 1431 ILTVNASDDDQGPNGMIRYKI--SGGNERKEFAVDPYSGAVTILQPLDYDTIQEYHLNIT 1488

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            A D G K   T   +++ +   N  SP F Q+ Y+  +SE    NS V  +  + + S
Sbjct: 1489 AEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISENLPPNSFVFQVKATDIDS 1546



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 24/181 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEAR 67
            ++   + A +      S    LT+ L DINDN+P              +PP         
Sbjct: 1482 EYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISENLPPNSF------ 1535

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              + +++ATD D   NA I YSI    +  +  F ID ++G +         E   Y+I 
Sbjct: 1536 --VFQVKATDIDSPKNAIIQYSISDGPDKDM--FAIDQKTGRVTAKYSFDYEENDLYTIN 1591

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            + A++        I E+ V + G N   P F Q  +  +VSE A + + V T+  +   +
Sbjct: 1592 IVASNPDSPMF-GIAELRVHINGVNEYYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDA 1650

Query: 185  G 185
            G
Sbjct: 1651 G 1651



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 28/166 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
           +   + AR++     +    + V + D NDN+P   +  P Q  A  A        ++++
Sbjct: 426 YTLSITARDRGDPPRATHTKIFVRILDENDNSP---VFDPKQYSASIAENASIGASVLQV 482

Query: 74  EATDNDLGVNAEITYSIYHVSNTGL--HKFRIDPRSGVIETTGKL--IAGEQYSITVQAT 129
            ATD D G+N  + YSI    N+G     F I   +GV+     L      +Y +TV+A 
Sbjct: 483 SATDVDDGLNGRVRYSI----NSGDTNRDFSIAEDTGVVRVAKNLNYERKSRYVLTVRAE 538

Query: 130 DTGG---------KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           D  G          +++ ++ VS +   N   P F  + Y   V E
Sbjct: 539 DCAGDVGGEVVRADTAEIVISVSDI---NDNPPTFLDSPYLAYVME 581



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKIEATDNDLGVN-AEITYSIYHVSN 95
            ++ +++ DINDN P   P +    ++      +I+ + A D DL  N A  TY +     
Sbjct: 1818 TVKIHITDINDNGPTFDPRVVGKVLENEPPNTKIMTLSAKDPDLPPNGAPFTYKLI---- 1873

Query: 96   TGLHK--FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTIVEVSVV 145
             G H+   +ID  SGV+ TT K+I  E   Q  I V+  D+G     SQ ++ + V+
Sbjct: 1874 GGKHRDFVKIDKHSGVVVTT-KMIDREVIPQLEILVEVEDSGSPKMKSQHVITIEVL 1929



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
            E  + + + +AT    G  + + Y+I    N G     +D  +G +   G+ +  E    
Sbjct: 900  EHGKLVARFKATSPKKGAASNVRYAIAG-GNIG-EALTMDKNTGEVHVAGRGLDYETLPV 957

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y + ++A D+     +T++++++ V   N  SPVF  N Y+ ++ E  S    V  ++  
Sbjct: 958  YEVWIEAKDSDVPPLRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAE 1017

Query: 181  RLASG 185
             L SG
Sbjct: 1018 DLDSG 1022


>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
          Length = 4349

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  + +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  +  
Sbjct: 3306 TVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--IGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + PR   +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   ++ G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNINALLGIITLAQKLDQANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATIT 178
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  ++
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVS 1683



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F ID  +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSYEEAFSIDLVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            +     AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SNSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPWPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   Q  +  ++ E A + ++V  +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQL 1159



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             F  +V A +K     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2344 HFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA 2403

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
             D D    + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G
Sbjct: 2404 IDPDSRDTSRLEYLI--LSGNQDRHFFINSSSGIISMFNLCKKHLDSSYNLRVGASD--G 2459

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                T+         N  SP FQQ+ Y+  ++E A + + V
Sbjct: 2460 VFRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKV 2500



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPD 1566



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 38.9 bits (89), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 27/126 (21%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++V V   +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQASTVVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTG 132
           +A+D G
Sbjct: 534 RASDWG 539



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   +  G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNYMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   P+F    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLS 1256



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 33/161 (20%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV 145
              ++E          Y++++ A+D GG+  + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASD-GGRPLARRTLCHVEVI 1019



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + I+ + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  VS   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
 gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
          Length = 2821

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 9/167 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
           ++R  V A++    +    V LTV++ D+ND+ P+  +  P +    E  R    ++ I+
Sbjct: 619 RYRLIVKAQDSGRPSMWSSVVLTVSVIDVNDHDPQF-VSTPFETSVFEDVRVGFSVIHIQ 677

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
           A D D G NAE+TYS+ +V       F ID  +G I T  +L   A   Y   VQA D G
Sbjct: 678 AIDADSGSNAELTYSLANVP--ARMPFEIDGDTGWIVTNAELDREAHAIYDFNVQAADQG 735

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +      VS+ +   N  +PVF    Y +NV E A+  ++V T+T
Sbjct: 736 SPARTAAARVSINILDVNDNAPVFNPKVYYINVPEDANPGTSVLTVT 782



 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 10/184 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ 60
           V ++E LDR+  N  +  F+V AR+      S   +L +++ D+ND+ P           
Sbjct: 395 VTTQEVLDREDMN--RHFFRVTARDNGSPPRSATATLQIDILDMNDHDPEFEENSYREAV 452

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
           ++  E    ++ + ATD D+G N++I YSI + S T    F+I  R GVI TT  L    
Sbjct: 453 LEGIEIGSNVLTVRATDQDIGPNSDIRYSIINPSGTNT-AFQISRRDGVITTTEALDRET 511

Query: 119 GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y + V+A+D G   ++S  +V ++V+   N   P F+Q +Y  +V E    ++ + T
Sbjct: 512 TASYRLEVRASDQGTPPRTSDVVVTITVL-DENDNEPQFEQQSYAKDVPENVRPDTVIQT 570

Query: 177 ITVS 180
           +  +
Sbjct: 571 VAAT 574



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 43   LNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNT 96
            +ND+NDNAP    +  ++  +G  R        + +I ATD D G N +I Y+ +   + 
Sbjct: 953  VNDVNDNAP----VFLLESYSGSVREDCSRGTSVTQISATDADSGTNGQIRYT-FTGGDN 1007

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G   F ID RSG+I T  +L       Y++   A D G    +T V++ V +   N  +P
Sbjct: 1008 GEDAFVIDERSGIIRTDKRLDRELIPVYNLVAYAEDQGQPEQKTPVDIIVTIEDVNDNAP 1067

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F  +T D+ V E   + S VA IT
Sbjct: 1068 QFPSDTIDIYVPENRVVGSVVARIT 1092



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 10/120 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I+ + ATD D G NA I+YS+       L+ F I+P +G I+T  +L    Q  ++++V 
Sbjct: 880 ILVVSATDGDEGENARISYSM-----DILNAFEIEPSTGAIKTKQRLDHEAQASFAVSVT 934

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ATD G   K  ++ V++ +V   N  +PVF   +Y  +V E  S  ++V  I+ +   SG
Sbjct: 935 ATDHGVPSKFDESYVDI-IVNDVNDNAPVFLLESYSGSVREDCSRGTSVTQISATDADSG 993



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 9/108 (8%)

Query: 27   EKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
            E QG      PV + V + D+NDNAP+ P    I I   E R     + +I A D D G 
Sbjct: 1042 EDQGQPEQKTPVDIIVTIEDVNDNAPQFPS-DTIDIYVPENRVVGSVVARITANDPDEGQ 1100

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            NAE+ Y I   +N  L  F++D  SG + T   L   A   Y ITVQA
Sbjct: 1101 NAEVMYYITKGNNPEL--FQLDIFSGELVTLIDLDYEARNFYEITVQA 1146



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 18/187 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +V+   LDR+      + F V A ++   A +    +++N+ D+NDNAP   P +  I 
Sbjct: 710 WIVTNAELDREAH--AIYDFNVQAADQGSPARTAAARVSINILDVNDNAPVFNPKVYYIN 767

Query: 61  I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGV--IETTGKL 116
           + +       ++ + A D D     E+    Y ++   + ++F I  ++G+  I     L
Sbjct: 768 VPEDANPGTSVLTVTANDAD-----EVGTVSYQITGGNVRNRFSITSQNGLGTISVALPL 822

Query: 117 IAGEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
              ++  + +TVQATD      +Q  + ++     NT  PVFQQ+ Y V V E   I +T
Sbjct: 823 DYKQETRFVLTVQATDRMLSDDAQVYINIT---DANTHRPVFQQSPYSVYVDEDVPIGTT 879

Query: 174 VATITVS 180
           +  ++ +
Sbjct: 880 ILVVSAT 886



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 11/190 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ + E LDR+      +R +V A ++     +  V +T+ + D NDN P+       + 
Sbjct: 500 VITTTEALDRE--TTASYRLEVRASDQGTPPRTSDVVVTITVLDENDNEPQFEQQSYAKD 557

Query: 62  QAGEARRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE--TTGKLI 117
                R   V   + ATD D G N++I YS+   ++ G   F ID  +G I   T     
Sbjct: 558 VPENVRPDTVIQTVAATDPDEGTNSQIRYSLIGGNSQG--HFTIDSATGDISVITNLDFE 615

Query: 118 AGEQYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           +  +Y + V+A D+G  S  S  ++ VSV+   N   P F    ++ +V E   +  +V 
Sbjct: 616 STPRYRLIVKAQDSGRPSMWSSVVLTVSVI-DVNDHDPQFVSTPFETSVFEDVRVGFSVI 674

Query: 176 TITVSRLASG 185
            I      SG
Sbjct: 675 HIQAIDADSG 684


>gi|391338388|ref|XP_003743540.1| PREDICTED: neural-cadherin-like [Metaseiulus occidentalis]
          Length = 3036

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 84/184 (45%), Gaps = 16/184 (8%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  ++  V A E  G   S  V L + + D+NDNAPR  + P  Q   
Sbjct: 651 LAKELDYEDLRQPKSYQLVVTATEDSG-GFSTSVDLVIKVTDVNDNAPRFEL-PDYQAHN 708

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
            +        I+K++ATD D G NAEITYS+          F ID + G I +  +L A 
Sbjct: 709 IDEDVPIGTSILKVKATDMDTGRNAEITYSL------DKEDFTIDSK-GNIYSNKRLDAD 761

Query: 119 -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               Y +TV+ATD G         V +     N  +P F Q+ Y  NV E A   + V T
Sbjct: 762 VNNTYVLTVKATDRGEPPLTGTATVRIYTENKNDEAPKFSQDVYTPNVDENAGPGTLVTT 821

Query: 177 ITVS 180
           +  S
Sbjct: 822 VVAS 825



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 12/188 (6%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            LDRD P+   ++RF V A ++ G        + VNL DINDN P     +      + G 
Sbjct: 1528 LDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDINDNPPFFAGGVFSGNVTENGT 1587

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A   ++ + ATD D    G NA++TYSI    V+  G   F ID  +GVI T    +  E
Sbjct: 1588 AGMTVMTMTATDYDDPMEGTNAKLTYSIEQNQVNENGELIFAIDEETGVISTAVCCLDRE 1647

Query: 121  ---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +Y+I V A D GG        +  +   N   P F +  + V V E  + N   A I
Sbjct: 1648 TNPEYTIKVVAVDGGGNKGAGTATIK-IKDINDMPPEFTKKEWYVEVDETEADNIPEAPI 1706

Query: 178  TVSRLASG 185
             V  +  G
Sbjct: 1707 LVVSVNDG 1714



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 22/191 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIARE-----KQG--TAASVPVSLTVNLNDINDNAPRLP---- 54
            K NLDRD     K+   V AR+     K G  T  +    + V + D+NDN P       
Sbjct: 862  KINLDRD-----KYELNVTARDDGACCKNGALTPHTSTALVVVFITDVNDNKPIFEDCSS 916

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P ++ +  ++   ++++ A DND G N ++ YS+    N    KF +D  +G I T  
Sbjct: 917  YAPKVE-EGAQSGTSVIRVRAKDNDKGHNGQVRYSMVQQPNQKGTKFSVDEVTGEIRTNK 975

Query: 115  KLIA----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
                    G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +   
Sbjct: 976  VFDREGDDGRFVSVTVKATDRGSPPLEGVCSFKVEITDVNDNPPLFDRQEYRENVKQDTQ 1035

Query: 170  INSTVATITVS 180
            I + +  ++ S
Sbjct: 1036 IGNPILRVSAS 1046



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 8/147 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S  V + D+NDN P        +   Q  +    I+++ A+D D  +N  I Y++    
Sbjct: 1005 CSFKVEITDVNDNPPLFDRQEYRENVKQDTQIGNPILRVSASDEDADLNGVIVYNLTAPY 1064

Query: 95   N-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEV--SVVPGPNTR 151
            +   LH F I+P SG I+   K +  + Y +   ATD G       VEV   VV   N  
Sbjct: 1065 DPADLHYFSINPESGWIQLR-KPLDRDSYHLRAIATDKGTPQHSATVEVVIDVVDRANN- 1122

Query: 152  SPVFQQNTYD-VNVSEGASINSTVATI 177
             P++ Q  Y  + + E   + S V +I
Sbjct: 1123 PPIWDQPVYGPIFIKENLEVGSKVISI 1149


>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
          Length = 4349

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  + +  V   N  +P F  +   V V +  ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130

Query: 173  TVATI 177
             VA +
Sbjct: 3131 PVAVV 3135



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY          
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ P+ P  P     ++       I+ + ATD D  +N++ITYS+  +  
Sbjct: 3306 TVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--IGG 3363

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I P+ G ++   K +  EQ   YS+ ++ATD+G        ++++ V   N  
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3422

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q  Y   V E + I S V  + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + PR   +      P  I  G    ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPG---TEL 1574

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D GVNAE+ YS+   ++ G   F I+   G+I    KL       +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNINALLGIITLAQKLDQANHAPHTLTVKA 1632

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATIT 178
             D G      +  V +   P+ RS P+F ++ Y V + E   + S +  ++
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVS 1683



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 25/192 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ + + LDR+  N  +   +V   +    +      + V + D+NDN P         R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVR 1250

Query: 53   LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  + P+      +   + ++ A+D D G+N  +TYSI    ++    F ID  +GV+ 
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDLVTGVVS 1301

Query: 112  TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
            ++    AGE   +T++ATD+G    S+   + +  +P P   S P+ F +  Y   V E 
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPWPRPSSIPLAFDETYYSFTVMET 1361

Query: 168  ASINSTVATITV 179
              +N  V  I+V
Sbjct: 1362 DPVNHMVGVISV 1373



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   Q  +  ++ E A + ++V  +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQL 1159



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651

Query: 119  GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
             E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPD 1566



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T    F I P SGV+   GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  +Y + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            +   V+A ++     S    + + + D NDN P++      P IQ  A      +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
             D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G 
Sbjct: 1162 WDPDSSSKGKLTFNITSGNHMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             S ++   V V +   N   P+F    ++V + E  S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLS 1256



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++V V   +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGQASTVVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    +   EVS+   +   N   P+F++     ++ +   +  ++ T++
Sbjct: 534 RASDWGSPFRRE-KEVSIFLQLRNLNDNQPMFEEVNCTGSIRQDWPVGKSIMTMS 587



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 33/161 (20%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
            LVV+  +LDR+  +  ++  +V AR++  +G        L + L D+NDN+P       R
Sbjct: 875  LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931

Query: 53   LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
            L +   +PP  +        +  ++A+D DLG   E+ Y    V   G H  FR+D  +G
Sbjct: 932  LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979

Query: 109  --VIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV 145
              ++E          Y++++ A+D GG+  + +T+  V V+
Sbjct: 980  ALILERELDFERRAGYNLSLWASD-GGRPLARRTLCHVEVI 1019



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
           REK+       VS+ + L ++NDN P   M   +       Q     + I+ + A D D 
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
             N  + Y I  VS   L  F ++  SGVI      I   AG+   YS+ + A+D    +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649

Query: 136 SQTIVEVSVVPGPNTRSPV 154
           S T + ++VV  P+   PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668


>gi|301608217|ref|XP_002933687.1| PREDICTED: protocadherin gamma-B1-like [Xenopus (Silurana)
           tropicalis]
          Length = 854

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 7/187 (3%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V +++LDR+          +I  +      +   S+ + ++D NDN P       +   
Sbjct: 238 LVLEKHLDRE--KQSSLELSLIPSDGGSPKKTCTASVKIVVHDANDNYPVFTQDTYVVNI 295

Query: 63  AGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +A     +++++A D D G NA+ITYS  H+       F I+P++G I  TG L    
Sbjct: 296 NEDAPNSFLVLQLQAADEDDGTNAQITYSFSHIPENARQIFTINPQTGEIRKTGHLDYEV 355

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++Y+ITV+A D GG  S   V + V+   N  +P  Q ++Y   + E A   + +A   
Sbjct: 356 TKRYTITVEARDGGGLVSPCKVSIQVIDA-NDNAPEIQISSYSATIPEDAPTQTVIAIFN 414

Query: 179 VSRLASG 185
              + SG
Sbjct: 415 TYDMDSG 421


>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
          Length = 4590

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2550 IFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRSTKYEVNI 2607

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA++TY+I   S +      I+  +G+I T   LI   
Sbjct: 2608 GSSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINKLTGLITTKESLIGLE 2667

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D+G    +++V V + +  P  + P F +  Y   +SE   I + +  I
Sbjct: 2668 NEFFTFFVRAVDSGSPPRESVVPVYIKILPPEVQLPRFSEPFYTYTISEDTPIGTEIDLI 2727

Query: 178  TVSRLASGCAIM 189
               R+  G A++
Sbjct: 2728 ---RVEHGGAVL 2736



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITY+I  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3250 EVLQVYAASRDIEANAEITYAI--ISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTV 3307

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V++ V   N  SPVF Q+TY   VSE A++   V TI
Sbjct: 3308 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITI 3359



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K+ LDR+     K  + +      GT +S    + V + D NDN+P         
Sbjct: 2978 WRVYVKKPLDREQ----KDSYLLTVTATDGTFSS-KARVEVKVLDANDNSPVCEKTSYSD 3032

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A   + ++++ ATD D+  NAEITY+++    +G  KF+++P +G + T   L  
Sbjct: 3033 TIPEDALPGKLVMQVSATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELRTLALLDR 3089

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             EQ  Y++ V+ATD GG+S Q  + V  +   N  +P F    Y + V E
Sbjct: 3090 EEQAVYNLLVKATDGGGRSCQAAI-VLTLEDVNDNAPEFTAEPYTITVFE 3138



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3095 YNLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDA 3154

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+   ++    +F I+ RSG+I+    L    Q  Y++T++A D G    
Sbjct: 3155 DTGLNRKISYSLVESADG---QFSINERSGIIQLEKHLDRELQAVYTLTLKAVDQGLPRR 3211

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y  +VSE   I + V  +
Sbjct: 3212 LTATGTVVVSVL-DINDNPPVFEYREYGASVSEDIVIGTEVLQV 3254



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP    P       ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1550 IVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVTALDKDKGRNAEVLYSI-ESGNI 1608

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V ++V    N  S
Sbjct: 1609 G-NSFTIDPILGSIKTARELDRSHQVDYDLMVKATDKGDPPMSEMTSVRIAVTVADNA-S 1666

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y   +SE   I S V  ++    +S
Sbjct: 1667 PKFTSKEYSAEISEAIRIGSFVGMVSAHSQSS 1698



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1149 IMENSPKDVSVVQIEAFDPDSSSNDKLTYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPE 1257



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 16/153 (10%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSI 90
            V + D NDN P         RLP           ++R+ + ++ A D D G NAE++YSI
Sbjct: 1234 VKILDENDNRPQFLQKFYKIRLPEREKADGDRSASKREPLYRVIAADKDEGPNAELSYSI 1293

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--P 146
               +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P
Sbjct: 1294 EEGNEHG--RFSIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKP 1351

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             P++    F+++ +   V E   +   +  I+V
Sbjct: 1352 KPSSEPISFEESVFSFTVMESDPVAHMIGVISV 1384



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     AS+ VS+ V   D NDN+P L   P     ++      ++++I
Sbjct: 2776 YQFSILARCTLDDYEVVASIDVSIQVK--DANDNSPVLESSPYEAFIVENLPGGSRVIQI 2833

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2834 RASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVVASD 2893

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV V+V    N   P F    Y   VSE
Sbjct: 2894 HGEKVQLSSTAIVGVTVT-DVNDSPPRFTAEIYKGTVSE 2931



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ DINDN+P         + + +A   + ++ I A D D   N+ I YSI    N
Sbjct: 3322 TVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPSNSHIHYSIIE-GN 3380

Query: 96   TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             G   F IDP  G ++ T  L    I+G  Y++TVQA D G         V++ V   N 
Sbjct: 3381 QG-SPFTIDPVRGEVKVTKPLDRETISG--YTLTVQAADNGNPPRVNTTTVNIDVSDVND 3437

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +P+F ++ Y V + E   +  +V  + V+
Sbjct: 3438 NAPLFSRDNYSVIIQENKPVGFSVLKLVVT 3467



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV 
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGIGV--FRIDEETGVIETSDRLDRESTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +EV +         P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVY 1145



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 11/102 (10%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN PR   IPP   ++  E   +   I+ +EA D D+G ++++ YS+  
Sbjct: 912  VLLKVSLDDVNDNPPRF--IPPNYSVKVREDLPEGTIIMWLEAYDPDVGQSSQVRYSLL- 968

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
              + G   F +D  SG +    +L   ++  Y++TV+A D G
Sbjct: 969  --DHGEGHFDVDKLSGAVRIVQQLDFEKKQLYNLTVRAKDKG 1008



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +V+++A+D D G+ + +TY I  V++    +F ++ R G I T  KL     A +  SI 
Sbjct: 2513 VVQVKASDRDSGIYSHVTYHI--VNDFAKDRFYVNDR-GQIFTLEKLDRETPAEKVISIR 2569

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2570 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2628



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 20/150 (13%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +NDN P        + Q  EAR          ++ + A D D     ++ YSI  +S   
Sbjct: 2385 LNDNPPLF------EQQVYEARISEHAAHGHFVMCVRACDADSSDLDKLEYSI--LSGND 2436

Query: 98   LHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F ID  +G+I  +   +      YS+ V  +D   +SS   V V+V+ G N  SPVF
Sbjct: 2437 HKSFIIDRETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSAR-VNVTVMGG-NLHSPVF 2494

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             QN Y+V ++E A +++ V  +  S   SG
Sbjct: 2495 HQNEYEVELAENAPLHTLVVQVKASDRDSG 2524



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 10/136 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           +N + P+  +  P  I+  E       I+ + ATD D G N ++ Y+I   ++     F 
Sbjct: 710 VNTHTPQFGVTLPTGIEVKENLPVGANILFMNATDLDSGFNGKLVYAISGGNDDSC--FT 767

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
           ID  +GV++    L     ++Y++ +   D G   +++  +++V+V+   N  +P F Q 
Sbjct: 768 IDMETGVLKVLSPLDREVMDKYTLNITVYDLGIPQRAAWRLLDVTVLDA-NDNAPEFLQE 826

Query: 159 TYDVNVSEGASINSTV 174
           +Y V VSE   +NS +
Sbjct: 827 SYFVEVSEDKEVNSEI 842



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SG I T   L       YS+TVQ T+  G S+ T V V V    N   PVF Q 
Sbjct: 1712 FNINPHSGSIITQRALDFETLPMYSLTVQGTNMAGLSTNTTVVVHV-RDENDNPPVFTQA 1770

Query: 159  TYDVNVSEGASINSTVAT 176
             Y   +SE AS+NS V T
Sbjct: 1771 EYSGFISESASVNSVVLT 1788



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 125 EKATDAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 184

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
             YS    ++     F I P SGV+  TG+L  +  + Y + + A D G K
Sbjct: 185 FYYSFKDRTDV----FAIHPTSGVVVLTGRLDFLETQLYELEILAADRGMK 231



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP   +     ++  E +    +I+++EATD DLG +  +TY+I     
Sbjct: 809 LDVTVLDANDNAPEF-LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYAIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS----SQTIVEVSVVPGPN 149
           T   KF ID  +GV++    L    Q  + + ++A D   +     S  +++VS +   N
Sbjct: 864 TDTEKFSIDSMTGVVKIIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVS-LDDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 923 DNPPRFIPPNYSVKVRE 939



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            E   +I++I A D D     ++ Y++   +    L KFR+DP +G + T  KL   A  Q
Sbjct: 1472 EPEVEILQISAVDRD--EKNKLIYTLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQ 1529

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + +TV   D      +    + V V   N  +P F   +YD  V E A++ S V  +T
Sbjct: 1530 HVLTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVT 1587



 Score = 42.7 bits (99), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 5/152 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P    P       +A      ++++ ATD+D   N  I+Y
Sbjct: 2263 TGAHAEVFVDIIVEDINDNPPVFVQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISY 2322

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVV 145
             +    +     F ID  +G+I     L     +Q+ I V+A D G  + S  +V    V
Sbjct: 2323 QLIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAV 2382

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F+Q  Y+  +SE A+    V  +
Sbjct: 2383 TDLNDNPPLFEQQVYEARISEHAAHGHFVMCV 2414



 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEA 66
            +LD +  +   F  QV         A    ++TV++ DIND  P     +  + +     
Sbjct: 1836 SLDYEETHAFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEVSLLLPTY 1895

Query: 67   RR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
            R   ++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1896 RGVNVITVNATDADSKAFSQVMYSITE-GNIG-EKFSMDHKTGTIAIQNTTQLRSRYELT 1953

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   V+++V    +  SP+ F Q+ Y   V E ++   T+A IT
Sbjct: 1954 VRASD-GRFTSMASVKINV--KESRESPLKFTQDAYSAVVKENSTEARTLAVIT 2004


>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
          Length = 4592

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2552 IFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRSTKYEVNI 2609

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA++TY+I   S +      I+  +G+I T   LI   
Sbjct: 2610 GSSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINKLTGLITTKESLIGLE 2669

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D+G    +++V V + +  P  + P F +  Y   +SE   I + +  I
Sbjct: 2670 NEFFTFFVRAVDSGSPPRESVVPVYIKILPPEVQLPRFSEPFYTYTISEDTPIGTEIDLI 2729

Query: 178  TVSRLASGCAIM 189
               R+  G A++
Sbjct: 2730 ---RVEHGGAVL 2738



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITY+I  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3252 EVLQVYAASRDIEANAEITYAI--ISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTV 3309

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V++ V   N  SPVF Q+TY   VSE A++   V TI
Sbjct: 3310 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITI 3361



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K+ LDR+     K  + +      GT +S    + V + D NDN+P         
Sbjct: 2980 WRVYVKKPLDREQ----KDSYLLTVTATDGTFSS-KARVEVKVLDANDNSPVCEKTSYSD 3034

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A   + ++++ ATD D+  NAEITY+++    +G  KF+++P +G + T   L  
Sbjct: 3035 TIPEDALPGKLVMQVSATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELRTLALLDR 3091

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             EQ  Y++ V+ATD GG+S Q  + V  +   N  +P F    Y + V E
Sbjct: 3092 EEQAVYNLLVKATDGGGRSCQAAI-VLTLEDVNDNAPEFTAEPYTITVFE 3140



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3097 YNLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDA 3156

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+   ++    +F I+ RSG+I+    L    Q  Y++T++A D G    
Sbjct: 3157 DTGLNRKISYSLVESADG---QFSINERSGIIQLEKHLDRELQAVYTLTLKAVDQGLPRR 3213

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y  +VSE   I + V  +
Sbjct: 3214 LTATGTVVVSVL-DINDNPPVFEYREYGASVSEDIVIGTEVLQV 3256



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP    P       ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1552 IVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVTALDKDKGRNAEVLYSI-ESGNI 1610

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V ++V    N  S
Sbjct: 1611 G-NSFTIDPILGSIKTARELDRSHQVDYDLMVKATDKGDPPMSEMTSVRIAVTVADNA-S 1668

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y   +SE   I S V  ++    +S
Sbjct: 1669 PKFTSKEYSAEISEAIRIGSFVGMVSAHSQSS 1700



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1093 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1150

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1151 IMENSPKDVSVVQIEAFDPDSSSNDKLTYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1208

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1209 EQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPE 1259



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 16/153 (10%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSI 90
            V + D NDN P         RLP           ++R+ + ++ A D D G NAE++YSI
Sbjct: 1236 VKILDENDNRPQFLQKFYKIRLPEREKADGDRSASKREPLYRVIAADKDEGPNAELSYSI 1295

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--P 146
               +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P
Sbjct: 1296 EEGNEHG--RFSIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKP 1353

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             P++    F+++ +   V E   +   +  I+V
Sbjct: 1354 KPSSEPISFEESVFSFTVMESDPVAHMIGVISV 1386



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     AS+ VS+ V   D NDN+P L   P     ++      ++++I
Sbjct: 2778 YQFSILARCTLDDYEVVASIDVSIQVK--DANDNSPVLESSPYEAFIVENLPGGSRVIQI 2835

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2836 RASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVVASD 2895

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV V+V    N   P F    Y   VSE
Sbjct: 2896 HGEKVQLSSTAIVGVTVT-DVNDSPPRFTAEIYKGTVSE 2933



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ DINDN+P         + + +A   + ++ I A D D   N+ I YSI    N
Sbjct: 3324 TVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPSNSHIHYSIIE-GN 3382

Query: 96   TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             G   F IDP  G ++ T  L    I+G  Y++TVQA D G         V++ V   N 
Sbjct: 3383 QG-SPFTIDPVRGEVKVTKPLDRETISG--YTLTVQAADNGNPPRVNTTTVNIDVSDVND 3439

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +P+F ++ Y V + E   +  +V  + V+
Sbjct: 3440 NAPLFSRDNYSVIIQENKPVGFSVLKLVVT 3469



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 11/102 (10%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN PR   IPP   ++  E   +   I+ +EA D D+G ++++ YS+  
Sbjct: 912  VLLKVSLDDVNDNPPRF--IPPNYSVKVREDLPEGTIIMWLEAYDPDVGQSSQVRYSLL- 968

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
              + G   F +D  SG +    +L   ++  Y++TV+A D G
Sbjct: 969  --DHGEGHFDVDKLSGAVRIVQQLDFEKKQLYNLTVRAKDKG 1008



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +V+++A+D D G+ + +TY I  V++    +F ++ R G I T  KL     A +  SI 
Sbjct: 2515 VVQVKASDRDSGIYSHVTYHI--VNDFAKDRFYVNDR-GQIFTLEKLDRETPAEKVISIR 2571

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2572 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2630



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 20/150 (13%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +NDN P        + Q  EAR          ++ + A D D     ++ YSI  +S   
Sbjct: 2387 LNDNPPLF------EQQVYEARISEHAAHGHFVMCVRACDADSSDLDKLEYSI--LSGND 2438

Query: 98   LHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F ID  +G+I  +   +      YS+ V  +D   +SS   V V+V+ G N  SPVF
Sbjct: 2439 HKSFIIDRETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSAR-VNVTVMGG-NLHSPVF 2496

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             QN Y+V ++E A +++ V  +  S   SG
Sbjct: 2497 HQNEYEVELAENAPLHTLVVQVKASDRDSG 2526



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 10/136 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           +N + P+  +  P  I+  E       I+ + ATD D G N ++ Y+I   ++     F 
Sbjct: 710 VNTHTPQFGVTLPTGIEVKENLPVGANILFMNATDLDSGFNGKLVYAISGGNDDSC--FT 767

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
           ID  +GV++    L     ++Y++ +   D G   +++  +++V+V+   N  +P F Q 
Sbjct: 768 IDMETGVLKVLSPLDREVMDKYTLNITVYDLGIPQRAAWRLLDVTVLDA-NDNAPEFLQE 826

Query: 159 TYDVNVSEGASINSTV 174
           +Y V VSE   +NS +
Sbjct: 827 SYFVEVSEDKEVNSEI 842



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SG I T   L       YS+TVQ T+  G S+ T V V V    N   PVF Q 
Sbjct: 1714 FNINPHSGSIITQRALDFETLPMYSLTVQGTNMAGLSTNTTVVVHV-RDENDNPPVFTQA 1772

Query: 159  TYDVNVSEGASINSTVAT 176
             Y   +SE AS+NS V T
Sbjct: 1773 EYSGFISESASVNSVVLT 1790



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 125 EKATDAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 184

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
             YS    ++     F I P SGV+  TG+L  +  + Y + + A D G K
Sbjct: 185 FYYSFKDRTDV----FAIHPTSGVVVLTGRLDFLETQLYELEILAADRGMK 231



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP   +     ++  E +    +I+++EATD DLG +  +TY+I     
Sbjct: 809 LDVTVLDANDNAPEF-LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYAIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS----SQTIVEVSVVPGPN 149
           T   KF ID  +GV++    L    Q  + + ++A D   +     S  +++VS +   N
Sbjct: 864 TDTEKFSIDSMTGVVKIIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVS-LDDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 923 DNPPRFIPPNYSVKVRE 939



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 12/96 (12%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLI--AGEQYSIT 125
            ++ + A D D G + EI YSI   S  G+  FRID  +G  VIET+ +L   +   Y +T
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGIGV--FRIDEETGKCVIETSDRLDRESTSHYWLT 1111

Query: 126  VQATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            V ATD G     + +EV +         P T  PV+
Sbjct: 1112 VYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVY 1147



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            E   +I++I A D D     ++ Y++   +    L KFR+DP +G + T  KL   A  Q
Sbjct: 1474 EPEVEILQISAVDRD--EKNKLIYTLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQ 1531

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + +TV   D      +    + V V   N  +P F   +YD  V E A++ S V  +T
Sbjct: 1532 HVLTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVT 1589



 Score = 42.7 bits (99), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 5/152 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P    P       +A      ++++ ATD+D   N  I+Y
Sbjct: 2265 TGAHAEVFVDIIVEDINDNPPVFVQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVV 145
             +    +     F ID  +G+I     L     +Q+ I V+A D G  + S  +V    V
Sbjct: 2325 QLIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAV 2384

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F+Q  Y+  +SE A+    V  +
Sbjct: 2385 TDLNDNPPLFEQQVYEARISEHAAHGHFVMCV 2416



 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEA 66
            +LD +  +   F  QV         A    ++TV++ DIND  P     +  + +     
Sbjct: 1838 SLDYEETHAFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEVSLLLPTY 1897

Query: 67   RR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
            R   ++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1898 RGVNVITVNATDADSKAFSQVMYSITE-GNIG-EKFSMDHKTGTIAIQNTTQLRSRYELT 1955

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   V+++V    +  SP+ F Q+ Y   V E ++   T+A IT
Sbjct: 1956 VRASD-GRFTSMASVKINV--KESRESPLKFTQDAYSAVVKENSTEARTLAVIT 2006


>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
          Length = 4369

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2984 WRISSRKTLDRE--HMAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3034

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 3035 LYTGKVHEDVFPGHFILKVSATDLDADTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3091

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  +++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3092 PLDRERKDVFNLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3150

Query: 173  TVATI 177
             VA +
Sbjct: 3151 PVAVV 3155



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            K+   +    K  ++ S   ++ VN+ D+N++ PR P  P     ++       I+ + A
Sbjct: 3306 KYFLSIECTRKSSSSLSDITTVVVNITDVNEHRPRFPQDPYSTRVLENALVGDVILTVSA 3365

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
             D D  +N++ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3366 ADEDGPLNSDITYSL--VEGNQLGHFTIHPKKGELQ-VAKALDWEQASSYSLKLRATDSG 3422

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                    +V++ V   N   P F Q  Y   V E + I S V  + +S
Sbjct: 3423 QPPLHEDTDVAIQVADVNDNPPRFFQLNYSTTVQENSPIGSKVLQLILS 3471



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V + D+NDN P         RLP  + P+      +   + ++ A+D D G+N  +TY
Sbjct: 1248 VVVGILDVNDNPPVFSHKLFNVRLPERLSPV------SPGPVYRLVASDLDEGLNGRVTY 1301

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +GV+ ++    AGE   +T++ATD G    S+   + +  +P
Sbjct: 1302 SIEESDEEG---FSIDPVTGVVSSSSIFTAGEYNILTIKATDNGQPPLSASVRLHIEWIP 1358

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1359 RPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1393



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  +TY+         
Sbjct: 2078 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGVVTYTF----AEDY 2133

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q+  EV +V   N  +P+FQ
Sbjct: 2134 TYFRIDPYLGDISLRKPFDYQALNKYRLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2192

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2193 SPYYKVRVPENITLYTPI 2210



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 9/169 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
            ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 2783 YQIDVMAHCLQNTDVVSLVSVNIQVIDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2842

Query: 77   DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
            D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y+  V A D G 
Sbjct: 2843 DKDTGRDGQVSYRLSADPGSNIHELFAIDSESGWITTLQELDCETCQTYNFHVVAYDQGQ 2902

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
                SSQ +V+VS+    N  +P F    Y  +V E +     VAT+ +
Sbjct: 2903 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVIENSEPGELVATLKI 2950



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            F ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3101 FNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3160

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
            D G NA++ YS+    ++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3161 DQGSNAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3217

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             S+   V VSVV G     PVF    + V V E A
Sbjct: 3218 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3251



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 15/177 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ + N + PR   +      P     G    ++
Sbjct: 1538 PSQHTLTVMVRDQEIPIKRNFVWVTIHVENGNLHPPRFTQLRYEASIPDTTAPG---TEL 1594

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D G NAE+ YS+   +  G   F I+   G+I  T KL       +++TV+A
Sbjct: 1595 LQVRAMDADRGANAEVRYSLLKGNGEGF--FNINALLGIITLTQKLDWANHAPHTLTVKA 1652

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             D G      +  V +   P+ RS P+F    Y V + E   + S +  + VS ++S
Sbjct: 1653 EDQGSPQWHDLATVIIHVYPSDRSAPIFSNTEYFVEIPESIPVGSPI--LLVSAMSS 1707



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2277 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2336

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A +++ + V+A D G    + +T+V V+ V   N  
Sbjct: 2337 DVSKFFQINGSTGEMSTVQELDYEAQQRFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2395

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2396 PPEFRQPQYEANVSELATCGHLVLKV 2421



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 2557 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASAYTVSI 2614

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
            Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 2615 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2671

Query: 119  GEQYSI--TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E  +I   ++A D G    +SQ  V + VVP      P F +  Y    SE     S +
Sbjct: 2672 LENRTIDFIIKAQDGGPPHWNSQVPVRLQVVPK-KVSLPKFSEPLYTFPASEDLPEGSEI 2730

Query: 175  ATI 177
              +
Sbjct: 2731 GVV 2733



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1486 ELLRVQATDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1543

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ ++ +
Sbjct: 1544 TVMVRDQEIPIKRNFVWVTIHVENGNLHPPRFTQLRYEASIPD 1586



 Score = 42.7 bits (99), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 17/164 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDTPLKSPICKVTATDADLGQNAEFYYNF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGP 148
           T    F I P SGV+   GKL      ++ + V A D   K S+     ++  + V   P
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKLNVTWRGKHELQVLAVDRMRKISEGNGFGSLAALIVHVEP 248

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
             R P    +   V  S  ++  +T ATI V   +SG A+ + E
Sbjct: 249 ALRKPPAIASV--VVTSPDSNDGTTYATILVDANSSGAAVESVE 290



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R +VIAR+  G   S+     V +   N + P L   P  +++  E       I  T 
Sbjct: 2158 KYRLKVIARD--GGTPSLQSEEEVLVTVRNKSNP-LFQSPYYKVRVPENITLYTPILHTQ 2214

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GK 134
                    + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G 
Sbjct: 2215 ARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGS 2272

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S+  VEV +V   N   P F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2273 FSEATVEV-LVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2322



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 15/117 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++        ETT   I    
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTIAAPLDYETTNFYIL--- 788

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV    T  KSS  ++ V+V    N  +P F    Y + +SE   + +TVA +T
Sbjct: 789 -NVTVYDLGTPQKSSWKLLTVNVKDW-NDHAPRFPPGGYQLTISEDTEVGTTVAELT 843



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D ND+APR    PP   Q       E    + ++   D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDHAPRF---PPGGYQLTISEDTEVGTTVAELTTKDADSEDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPRKGHQ 904


>gi|348514341|ref|XP_003444699.1| PREDICTED: protocadherin gamma-A11-like [Oreochromis niloticus]
          Length = 870

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 27/206 (13%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           +LV+ K+ LDR+     K R   +   K   A S  + +TV++ DINDN+P        +
Sbjct: 480 FLVLQKQ-LDRETNEKHKLRLTAVDGGK--PAKSGDIEITVDVLDINDNSPVFTK----E 532

Query: 61  IQAGEARRQI------VKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETT 113
           + +   +  I      +++ ATD D G N EI YS    V    +  F ID  +G I  T
Sbjct: 533 LYSATLKENIPTGTVVIQVNATDLDQGANGEIIYSFGNEVDPKIMELFSIDANTGEIHVT 592

Query: 114 GKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           GKL       Y I +QA+D      K+ +++  V  V   N   P  +  ++  ++ E +
Sbjct: 593 GKLDFEKSTSYEIDIQASDKAHVPLKTGKSV--VITVADVNDNPPEIEVTSFSSSIKEDS 650

Query: 169 SINSTVATITVSRLASG------CAI 188
            I +TVA I+V+ L SG      CAI
Sbjct: 651 KIGTTVALISVTDLDSGINGKVICAI 676


>gi|158284502|ref|XP_307205.4| AGAP011526-PA [Anopheles gambiae str. PEST]
 gi|157020993|gb|EAA03222.4| AGAP011526-PA [Anopheles gambiae str. PEST]
          Length = 1376

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 17/169 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQ 62
           LDR+      +   V A +    A S   +L VN+ DINDN P          +P I   
Sbjct: 600 LDRE--QKALYNLSVSATDLGHPALSNAATLVVNVQDINDNPPEFTSKHYFASVPEINAI 657

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GE 120
             E    I+K+ AT  D G+NAEITYSI  +      KF I  R+GV+     L     +
Sbjct: 658 GSE----ILKVLATSKDTGINAEITYSI--IGGNEHRKFGIHNRTGVLSLADTLDYERAK 711

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            Y +T+QA D G      +  V++ V   N   P F QN+Y   + E A
Sbjct: 712 DYFLTIQAVDGGTPPLSNLATVNISVTDSNDNHPQFTQNSYSARIREDA 760



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 12/183 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI-QAGEA 66
           LDR+  +       V  R+  G   S  + L   L D+NDNAP   M P  + + +  E 
Sbjct: 496 LDRETQSRYSLMAHVQDRDHPGWECSSQIELA--LTDLNDNAPEFSMNPYSVTLPEDAEV 553

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
              + KI ATD D+G+N +I Y+     ++    FRI P SG++ T  K +  EQ   Y+
Sbjct: 554 GTLVTKIHATDADIGINRKIKYAFL---DSYRDHFRIAPESGIV-TLAKPLDREQKALYN 609

Query: 124 ITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           ++V ATD G  + S     V  V   N   P F    Y  +V E  +I S +  +  +  
Sbjct: 610 LSVSATDLGHPALSNAATLVVNVQDINDNPPEFTSKHYFASVPEINAIGSEILKVLATSK 669

Query: 183 ASG 185
            +G
Sbjct: 670 DTG 672



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           I+K++ATD D G    + YSI  +S+     F ID   G I T  KL   E  QY I V 
Sbjct: 28  ILKVKATDKDFGEYGRLAYSI--ISDDMQEYFSIDKEKGEIVTKKKLDREERMQYDIPVM 85

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           A D GG++  + V +  V   N   PVFQ   Y   +    ++N+T   +
Sbjct: 86  AVDAGGRAGFSTVRLR-VGDENDNQPVFQYREYKTLIQGNLTVNTTFYRV 134



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 5/147 (3%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAG--EARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           + +++ D NDN P     P     A   E    I+K+ A D D G N +I Y++      
Sbjct: 212 IVLHVQDENDNTPIFESNPYSFALAENIEKGSSIMKLTARDADSGSNGDIRYALSPDVGD 271

Query: 97  GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            ++ F +D  +G I T   L     E Y   V ATD G     T   V V +   N   P
Sbjct: 272 IVNIFDVDAYTGWITTLVALDKEKREDYKFQVLATDNGQPKHTTRSTVIVRLKDYNDCPP 331

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF++  Y  +VSE A   + V  I  +
Sbjct: 332 VFREGQYKASVSEDALPGTVVLQIATT 358



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 16/195 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V+K+ LDR+     ++   V+A +  G A    V L V   D NDN P         + 
Sbjct: 66  IVTKKKLDRE--ERMQYDIPVMAVDAGGRAGFSTVRLRVG--DENDNQPVFQYREYKTLI 121

Query: 63  AGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAG 119
            G         ++ A D D   NA + YSI+   N+G+ + F ++     I   G+L   
Sbjct: 122 QGNLTVNTTFYRVRAVDADDNQNAVVKYSIFDSQNSGIRELFGLEEPQFTINDAGQLRLA 181

Query: 120 --------EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
                   + + I + A          + E+ + V   N  +P+F+ N Y   ++E    
Sbjct: 182 KTLDREVRDAHLIAILAETDSSPPLTAVTEIVLHVQDENDNTPIFESNPYSFALAENIEK 241

Query: 171 NSTVATITVSRLASG 185
            S++  +T     SG
Sbjct: 242 GSSIMKLTARDADSG 256


>gi|326672581|ref|XP_003199698.1| PREDICTED: cadherin-18-like, partial [Danio rerio]
          Length = 654

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDNAP+ P  P     P   + G +  Q+   +A D   G +A + YS+ H 
Sbjct: 151 FIIKVQDINDNAPKFPDGPFVTSVPEMSELGTSVFQVTATDADDPTYGNSARVVYSVLH- 209

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F +DP++G+I T    +   A E YS+ +QA D     GG S  T V +++  
Sbjct: 210 ---GQPYFSVDPKTGIIRTALADMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT- 265

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P F Q  Y V V E A +   V  I
Sbjct: 266 DVNDNPPKFPQKNYQVFVPESAQVGKPVGKI 296



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 29/176 (16%)

Query: 25  AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATD 77
           A++  G    +  S TVN  L D+NDN P+ P     +  P   Q G   + + KI+A D
Sbjct: 244 AKDMAGQVGGLSGSTTVNITLTDVNDNPPKFPQKNYQVFVPESAQVG---KPVGKIKAND 300

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKL--IAGEQYSITVQATDT 131
            D+G+NAEI YSI  ++  G   F I    D R GVI     L     +QYS+ + A +T
Sbjct: 301 EDIGINAEIKYSI--LNPEGAAVFSISTDKDTREGVITLRKPLNYEKKKQYSLHISAENT 358

Query: 132 ---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                    G       ++++V  G     P+F  + Y + V E A + + V  +T
Sbjct: 359 HVDPRYSYLGSFKDDATLKITV--GDVDEPPLFSMDYYIMEVYENARVGTEVGAVT 412


>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
          Length = 4587

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2550 IFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRSTKYEVNI 2607

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA++TY+I   S +      I+  +G+I T   LI   
Sbjct: 2608 GSSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINKLTGLITTKESLIGLE 2667

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D+G    +++V V + +  P  + P F +  Y   +SE   I + +  I
Sbjct: 2668 NEFFTFFVRAVDSGSPPRESVVPVYIKILPPEVQLPRFSEPFYTYTISEDTPIGTEIDLI 2727

Query: 178  TVSRLASGCAIM 189
               R+  G A++
Sbjct: 2728 ---RVEHGGAVL 2736



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITY+I  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3250 EVLQVYAASRDIEANAEITYAI--ISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTV 3307

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V++ V   N  SPVF Q+TY   VSE A++   V TI
Sbjct: 3308 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITI 3359



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K+ LDR+     K  + +      GT +S    + V + D NDN+P         
Sbjct: 2978 WRVYVKKPLDRE----QKDSYLLTVTATDGTFSS-KARVEVKVLDANDNSPVCEKTSYSD 3032

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A   + ++++ ATD D+  NAEITY+++    +G  KF+++P +G + T   L  
Sbjct: 3033 TIPEDALPGKLVMQVSATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELRTLALLDR 3089

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             EQ  Y++ V+ATD GG+S Q  + V  +   N  +P F    Y + V E
Sbjct: 3090 EEQAVYNLLVKATDGGGRSCQAAI-VLTLEDVNDNAPEFTAEPYTITVFE 3138



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3095 YNLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDA 3154

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+   ++    +F I+ RSG+I+    L    Q  Y++T++A D G    
Sbjct: 3155 DTGLNRKISYSLVESADG---QFSINERSGIIQLEKHLDRELQAVYTLTLKAVDQGLPRR 3211

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y  +VSE   I + V  +
Sbjct: 3212 LTATGTVVVSVL-DINDNPPVFEYREYGASVSEDIVIGTEVLQV 3254



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP    P       ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1550 IVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVTALDKDKGRNAEVLYSI-ESGNI 1608

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V ++V    N  S
Sbjct: 1609 G-NSFTIDPILGSIKTARELDRSHQVDYDLMVKATDKGDPPMSEMTSVRIAVTVADNA-S 1666

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y   +SE   I S V  ++    +S
Sbjct: 1667 PKFTSKEYSAEISEAIRIGSFVGMVSAHSQSS 1698



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1149 IMENSPKDVSVVQIEAFDPDSSSNDKLTYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPE 1257



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 16/153 (10%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSI 90
            V + D NDN P         RLP           ++R+ + ++ A D D G NAE++YSI
Sbjct: 1234 VKILDENDNRPQFLQKFYKIRLPEREKADGDRSASKREPLYRVIAADKDEGPNAELSYSI 1293

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--P 146
               +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P
Sbjct: 1294 EEGNEHG--RFSIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKP 1351

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             P++    F+++ +   V E   +   +  I+V
Sbjct: 1352 KPSSEPISFEESVFSFTVMESDPVAHMIGVISV 1384



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     AS+ VS+ V   D NDN+P L   P     ++      ++++I
Sbjct: 2776 YQFSILARCTLDDYEVVASIDVSIQVK--DANDNSPVLESSPYEAFIVENLPGGSRVIQI 2833

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2834 RASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVVASD 2893

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV V+V    N   P F    Y   VSE
Sbjct: 2894 HGEKVQLSSTAIVGVTVT-DVNDSPPRFTAEIYKGTVSE 2931



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +N+ DINDN+P         + + +A   + ++ I A D D   N+ I YSI    N
Sbjct: 3322 TVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPSNSHIHYSIIE-GN 3380

Query: 96   TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             G   F IDP  G ++ T  L    I+G  Y++TVQA D G         V++ V   N 
Sbjct: 3381 QG-SPFTIDPVRGEVKVTKPLDRETISG--YTLTVQAADNGNPPRVNTTTVNIDVSDVND 3437

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +P+F ++ Y V + E   +  +V  + V+
Sbjct: 3438 NAPLFSRDNYSVIIQENKPVGFSVLKLVVT 3467



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV 
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGIGV--FRIDEETGVIETSDRLDRESTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +EV +         P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVY 1145



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 11/102 (10%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN PR   IPP   ++  E   +   I+ +EA D D+G ++++ YS+  
Sbjct: 912  VLLKVSLDDVNDNPPRF--IPPNYSVKVREDLPEGTIIMWLEAYDPDVGQSSQVRYSLL- 968

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
              + G   F +D  SG +    +L   ++  Y++TV+A D G
Sbjct: 969  --DHGEGHFDVDKLSGAVRIVQQLDFEKKQLYNLTVRAKDKG 1008



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +V+++A+D D G+ + +TY I  V++    +F ++ R G I T  KL     A +  SI 
Sbjct: 2513 VVQVKASDRDSGIYSHVTYHI--VNDFAKDRFYVNDR-GQIFTLEKLDRETPAEKVISIR 2569

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2570 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2628



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 10/136 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           +N + P+  +  P  I+  E       I+ + ATD D G N ++ Y+I   ++     F 
Sbjct: 710 VNTHTPQFGVTLPTGIEVKENLPVGANILFMNATDLDSGFNGKLVYAISGGNDDSC--FT 767

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
           ID  +GV++    L     ++Y++ +   D G   K++  +++V+V+   N  +P F Q 
Sbjct: 768 IDMETGVLKVLSPLDREVMDKYTLNITVYDLGIPQKAAWRLLDVTVLDA-NDNAPEFLQE 826

Query: 159 TYDVNVSEGASINSTV 174
           +Y V VSE   +NS +
Sbjct: 827 SYFVEVSEDKEVNSEI 842



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 20/150 (13%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +NDN P        + Q  EAR          ++ + A D D     ++ YSI  +S   
Sbjct: 2385 LNDNPPLF------EQQVYEARISEHAAHGHFVMCVRACDADSSDLDKLEYSI--LSGND 2436

Query: 98   LHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F ID  +G+I  +   +      YS+ V  +D   +SS   V V+V+ G N  SPVF
Sbjct: 2437 HKSFIIDRETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSAR-VNVTVMGG-NLHSPVF 2494

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             QN Y+V ++E A +++ V  +  S   SG
Sbjct: 2495 HQNEYEVELAENAPLHTLVVQVKASDRDSG 2524



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SG I T   L       YS+TVQ T+  G S+ T V V V    N   PVF Q 
Sbjct: 1712 FNINPHSGSIITQRALDFETLPMYSLTVQGTNMAGLSTNTTVVVHV-RDENDNPPVFTQA 1770

Query: 159  TYDVNVSEGASINSTVAT 176
             Y   +SE AS+NS V T
Sbjct: 1771 EYSGFISESASVNSVVLT 1788



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+G N E
Sbjct: 125 EKATDAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGE 184

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
             YS    ++     F I P SGV+  TG+L  +  + Y + + A D G K
Sbjct: 185 FYYSFKDRTDV----FAIHPTSGVVVLTGRLDFLETQLYELEILAADRGMK 231



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP   +     ++  E +    +I+++EATD DLG +  +TY+I     
Sbjct: 809 LDVTVLDANDNAPEF-LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYAIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS----SQTIVEVSVVPGPN 149
           T   KF ID  +GV++    L    Q  + + ++A D   +     S  +++VS +   N
Sbjct: 864 TDTEKFSIDSMTGVVKIIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVS-LDDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F    Y V V E
Sbjct: 923 DNPPRFIPPNYSVKVRE 939



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            E   +I++I A D D     ++ Y++   +    L KFR+DP +G + T  KL   A  Q
Sbjct: 1472 EPEVEILQISAVDRD--EKNKLIYTLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQ 1529

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + +TV   D      +    + V V   N  +P F   +YD  V E A++ S V  +T
Sbjct: 1530 HVLTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVT 1587



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 5/152 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P    P       +A      ++++ ATD+D   N  I+Y
Sbjct: 2263 TGAHAEVFVDIIVEDINDNPPVFVQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISY 2322

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVV 145
             +    +     F ID  +G+I     L     +Q+ I V+A D G  + S  +V    V
Sbjct: 2323 QLIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAV 2382

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F+Q  Y+  +SE A+    V  +
Sbjct: 2383 TDLNDNPPLFEQQVYEARISEHAAHGHFVMCV 2414



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEA 66
            +LD +  +   F  QV         A    ++TV++ DIND  P     +  + +     
Sbjct: 1836 SLDYEETHAFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEVSLLLPTY 1895

Query: 67   RR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
            R   ++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1896 RGVNVITVNATDADSKAFSQVMYSITE-GNIG-EKFSMDHKTGTIAIQNTTQLRSRYELT 1953

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   V+++V    +  SP+ F Q+ Y   V E ++   T+A IT
Sbjct: 1954 VRASD-GRFTSMASVKINV--KESRESPLKFTQDAYSAVVKENSTEARTLAVIT 2004


>gi|149020622|gb|EDL78427.1| FAT tumor suppressor homolog 3 (Drosophila) [Rattus norvegicus]
          Length = 2306

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           +++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 302 IITTERLDRE--NPLEGDISIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTLEYRASV 359

Query: 62  QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
           +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 360 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 419

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                S  V+A D G     +++ V + V  P T  P F Q+ Y   ++E  SI ST+ T
Sbjct: 420 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTIAEDTSIGSTIDT 479

Query: 177 ITV 179
           + +
Sbjct: 480 LRI 482



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            ++V ++ LDR+      +   V A ++  G + S   S+T+ + DINDN P       L 
Sbjct: 936  VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDYLV 993

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I    
Sbjct: 994  TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVLE 1047

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             L     +++ + V+A D G  +  T   VS+ +   N   P F Q+ Y   +SE A
Sbjct: 1048 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 1104



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 849  YNLIARATDGGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAVDP 908

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   G+S
Sbjct: 909  DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 965

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 966  LSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 1008



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 41  VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           V ++D+NDN+P    +      P  I    + + I+K+ A D D+G N +I YS+Y   N
Sbjct: 767 VTVSDVNDNSPVCDQVAYSASLPEDI---PSNKIILKVSAKDADIGSNGDIRYSLYGSGN 823

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
           +    F +DP SG ++T   L+  E+   Y++  +ATD GG+   + V + ++   N   
Sbjct: 824 S---DFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCSSTV-LLLLEDVNDNP 878

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           PVF  N Y   V E  +  + +  +
Sbjct: 879 PVFSSNHYTACVYENTATKALLTRV 903



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 19  FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
           F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 529 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYETIIMEGMPVG 580

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
            ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 581 TKLAQVRAIDTDWGANGQVTYSLH--SDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPT 638

Query: 122 YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +S  V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 639 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 697



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31  TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           T A   V++ + ++D+NDN P    P       ++      ++++ +TD D G N  + Y
Sbjct: 15  TGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNNLVHY 74

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
            I   +      F ID  SG+I  T +++  E     ++ V ATD G    SS+ +V++ 
Sbjct: 75  QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 132

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 133 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 169



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
            +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 112 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 171

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
           D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  +S
Sbjct: 172 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 228

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 229 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 265



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
           +++ + ATD D G   +++YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 264 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 319

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 320 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTLEYRASV 359


>gi|397473819|ref|XP_003808397.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pan
           paniscus]
          Length = 3150

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 470 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 522

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 523 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 582

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 583 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 642

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 643 PGAPVLRVTAS 653



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
            +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 1010 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 1061

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
             +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 1062 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 1120

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 1121 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 1175



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 805 YSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 863

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 864 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 914

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 915 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 971



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 927  IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 981

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
              + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 982  DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 1040

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 1041 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 1074



 Score = 39.3 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 609 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI 667

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVV 145
             +S     +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+
Sbjct: 668 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL 725

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              N  +P+F    +   V E   +   V
Sbjct: 726 -DINDNAPIFVSTPFQATVLESVPLGYLV 753



 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 1101 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 1158

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 1159 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 1216

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 1217 DRPEYVLVIQATSAPLVSRATV 1238


>gi|119582397|gb|EAW61993.1| hCG1982192, isoform CRA_h [Homo sapiens]
          Length = 948

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----------ARR 68
            +FQV AR+         V+L V + D NDNAP L + P     AG           A  
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWSVGAGH 589

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 590 VVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 272


>gi|410931117|ref|XP_003978942.1| PREDICTED: protocadherin Fat 2-like, partial [Takifugu rubripes]
          Length = 1091

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 23/156 (14%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----------VKIEATDNDLGVNAEIT 87
           ++ VN+ D+NDN       PP+  + G  R +I          +K+ ATD D  VN+ + 
Sbjct: 34  TVIVNVTDVNDN-------PPV-FEEGGYRVEIKEDLTPGSLVLKVTATDQDGPVNSLLR 85

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV- 144
           YSI  VS   L +F I PRSG I     L   E   YS+TVQA D G     + V +++ 
Sbjct: 86  YSI--VSGDPLQQFSIHPRSGEISVATALDREEVPHYSLTVQAADEGAPPLSSAVLITIT 143

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           V   N   P+F Q  + + + EG S  S+V  + V+
Sbjct: 144 VADVNDNPPIFSQVNHSLMLQEGESTGSSVLQLLVT 179



 Score = 37.0 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR-RQIVKIEAT 76
           +   V A ++     S  V +T+ + D+NDN P    +   + +Q GE+    ++++  T
Sbjct: 120 YSLTVQAADEGAPPLSSAVLITITVADVNDNPPIFSQVNHSLMLQEGESTGSSVLQLLVT 179

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           D D   N    +S + VS     +F +D + G++  +  L       + + +Q TD+G  
Sbjct: 180 DRDTPRNGP-PFSFHIVSGNEERRFHVD-QGGLLSLSAPLRRKVKAHHQLKIQVTDSGHP 237

Query: 135 SSQTIVEVSVVPGPNTRSP 153
              +I  V++     +R P
Sbjct: 238 PLSSICVVNINVTEQSRYP 256


>gi|312378848|gb|EFR25304.1| hypothetical protein AND_09493 [Anopheles darlingi]
          Length = 3184

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 85/185 (45%), Gaps = 19/185 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPI 59
           +V++   LDR+  +   FR  VIA +      S   +L VN+ D ND+ P          
Sbjct: 667 VVLTSATLDRELMDVHYFR--VIATDDSFPPRSGTTTLQVNVLDCNDHTPTFEAEQFHAT 724

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV-----SNTGLHKFRIDPRSGVIETTG 114
             +       ++ I ATD D+G NAEI YSI  +     S     KFRID RSG I T  
Sbjct: 725 VREGVSVGSTVITIRATDQDIGKNAEIEYSITSITGERESPIDSQKFRIDARSGTISTRS 784

Query: 115 KL---IAGEQYSITVQATD-----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   ++G  Y+I V A+D     T  KS+ T V V ++   N   P F + TY V V E
Sbjct: 785 ALDREVSG-MYTIAVTASDMATPQTERKSATTTVLVKIL-DDNDNYPQFSERTYTVQVRE 842

Query: 167 GASIN 171
               N
Sbjct: 843 DQWTN 847



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 9/168 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +R  + A++    + S    L VN+ D NDNAPR          +++      IV+++A 
Sbjct: 904  YRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYNIVRVQAY 963

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
            D D G N+EITYSI +  ++      +DPR+G I TT  L   EQ  YS  V A D G  
Sbjct: 964  DADEGANSEITYSILNRDDS--MPLAVDPRTGWIHTTKGLDREEQSRYSFQVVAVDGGIP 1021

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             KS+ T V V+ +   N   P F    Y+  ++E     + V T+T +
Sbjct: 1022 PKSASTSVIVT-IQDVNDNDPTFSPKYYEAMLAEDQPPGTPVTTVTAT 1068



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQ 60
            VV+   LDR+      +   V A++    + S    + + + D+NDNAP  ++P+     
Sbjct: 1208 VVTNAKLDRE--TTAGYLLTVTAKDGGNPSLSDTTDVEIAVTDVNDNAPVFKVPLYQATI 1265

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       +V+I ATD D+G+N  + Y++    +     F +DP SGVI T   L    
Sbjct: 1266 PEDALIGTSVVQIGATDLDMGLNGRVKYALSQ-KDMDEGSFVVDPISGVIRTNKGLDRES 1324

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y ++  A+D G  +  + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1325 IPVYHLSAIASDKGTPTMSSTVEVQIRLDDVNDSPPTFASDKLTLYVPENSPVGSVVGEI 1384



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 12/155 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +N+ D N+ AP     P      +       ++ + ATD+D+G+NA+ITY +   S  GL
Sbjct: 1134 INITDANNFAPVFENAPYSASVFEDAPIGTTVLVVSATDSDVGINAQITYLLNDESVNGL 1193

Query: 99   ---HKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                 F I+ ++G + T  KL     AG  Y +TV A D G  S     +V + V   N 
Sbjct: 1194 GANEPFTINAQTGAVVTNAKLDRETTAG--YLLTVTAKDGGNPSLSDTTDVEIAVTDVND 1251

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +PVF+   Y   + E A I ++V  I  + L  G
Sbjct: 1252 NAPVFKVPLYQATIPEDALIGTSVVQIGATDLDMG 1286



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 19/188 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
             + + + LDR+  +  ++ FQV+A +      S   S+ V + D+NDN    P   P   
Sbjct: 994  WIHTTKGLDREEQS--RYSFQVVAVDGGIPPKSASTSVIVTIQDVNDND---PTFSPKYY 1048

Query: 62   QAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS--GVIETTG 114
            +A  A  Q     +  + ATD D   +A + Y I   +  G  +F I  ++  G+I    
Sbjct: 1049 EAMLAEDQPPGTPVTTVTATDPD--EDARLHYEITAGNTRG--RFAITSQNGRGLITIAQ 1104

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  +++T+ ATD+G ++   IV +++    N  +PVF+   Y  +V E A I +
Sbjct: 1105 PLDYKQERRFALTITATDSGQRTDTAIVNINITDA-NNFAPVFENAPYSASVFEDAPIGT 1163

Query: 173  TVATITVS 180
            TV  ++ +
Sbjct: 1164 TVLVVSAT 1171


>gi|61162128|dbj|BAD91053.1| Fc2-cadherin [Folsomia candida]
          Length = 1651

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        +TVNL DINDN+P  P+        + G 
Sbjct: 143 LDRDSPNGRAQWRFTVFAQDEGGEGLVGYSDVTVNLKDINDNSPIFPLGIYFGNVTENGT 202

Query: 66  ARRQIVKIEATDND---LGVNAEITYSI-YHVSNTGLHK--FRIDPRSGVIETTGKLIAG 119
           +   ++ + A D D    G NA++TYSI  +V +   ++  F I+P +GVI+T    +  
Sbjct: 203 SGMVVMTMTAVDYDDPNEGTNAKLTYSIEKNVIDEEQNRPIFEIEPETGVIKTAVCCLDR 262

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ +EG+++  T 
Sbjct: 263 EKTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPHFTKDEWFTEVDETEGSTLPDTP 321

Query: 174 VATITV 179
           + T+TV
Sbjct: 322 ILTVTV 327


>gi|344281957|ref|XP_003412742.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Loxodonta
           africana]
          Length = 1025

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I +   E      Q+ KI ATD D G NAEI+Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GV 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  S
Sbjct: 508 DAPSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           PVF  N Y+  V E    + TV  ITV+ L  G
Sbjct: 568 PVFTHNEYNFYVPESLPRHGTVGLITVTDLDYG 600



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF-VVPPTNYTY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGL--FIIDETTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           A +   + + V+A D G   S
Sbjct: 741 AADLGLHRLVVKANDLGQPDS 761



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPESLPRHG----TVGLITVTDLDYGENSAVTLSILDVND----DFSIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKE-NEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VSN     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIKEPLD 316

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
            N+ +A ITV+
Sbjct: 376 FNTKIALITVT 386



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  KE LDR+  PN    +  V+A +  G +      + VN+ D+NDN P +    +I 
Sbjct: 308 LITIKEPLDREESPN---HKLLVLASD--GGSMPARAMVLVNVTDVNDNVPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPFNTKIALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           V E  S  + +  I+ +   SG
Sbjct: 475 VPENNSPGTQLTKISATDADSG 496



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQLIK----GQGV 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF++N  +V++ E A + ++V  +
Sbjct: 241 -DTNDNHPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|9256584|ref|NP_061728.1| protocadherin alpha-2 isoform 1 precursor [Homo sapiens]
 gi|13878430|sp|Q9Y5H9.1|PCDA2_HUMAN RecName: Full=Protocadherin alpha-2; Short=PCDH-alpha-2; Flags:
           Precursor
 gi|5456906|gb|AAD43704.1| protocadherin alpha 2 [Homo sapiens]
          Length = 948

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----------ARR 68
            +FQV AR+         V+L V + D NDNAP L + P     AG           A  
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWSVGAGH 589

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 590 VVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 272


>gi|402872776|ref|XP_003900280.1| PREDICTED: protocadherin alpha-2 [Papio anubis]
          Length = 824

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 FSTIQTKFTIDPSSGEIRTMGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 13/124 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + + LDR+       +FQV AR+    + S  V+L V + D NDNAP L + P     
Sbjct: 517 VYALQPLDREELE--LLQFQVSARDAGVPSLSSNVTLQVFVLDENDNAPAL-LAPRAGTA 573

Query: 63  AGE----------ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           AG           A   + K+ A D D G NA ++Y +   + +    FR+   +G I T
Sbjct: 574 AGAVSELVPWSVGAGYVVAKVRAVDADSGYNAWLSYKLQLGTGSARIPFRVGLYTGEIST 633

Query: 113 TGKL 116
           T  L
Sbjct: 634 TRAL 637



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTG 97
           V + DINDN P  PM   I I+  E+R    +     A+D D+GVNA ++Y +   S++ 
Sbjct: 121 VEVKDINDNPPVFPMTVKI-IRFPESRLLNSRFPLEGASDADIGVNALLSYKL---SSSE 176

Query: 98  LHKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPN 149
                I     + E+     GK +  E+ +   + + ATD G       V++ + V   N
Sbjct: 177 FFFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVN 236

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P F Q+ Y V + E  +  + V  +  S
Sbjct: 237 DNEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
          Length = 4589

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            VV+ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VVTTERLDRENPLEGDI--SIFLRALDGGGRTSFCTVRVIVVDENDNAPQFLTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N++ITYS+Y  ++  +     +DP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAMDPDDGANSKITYSLYSEASVSVADLLEMDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I +TV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETLLPSFTQSQYSFAIAEDTAIGTTVD 2728

Query: 176  TITV 179
            T+ V
Sbjct: 2729 TLRV 2732



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    V+ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSVRVTDQGSPPMSATAIVRISVTMSDNSH-PKFMHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N   
Sbjct: 3017 VTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGPGN--- 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            ++F +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   P+F
Sbjct: 3074 NEFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCQSDIRL-ILEDVNDNPPMF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNACVYENTATKALLTRV 3153



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G+I    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTRQFAINSSTGIIYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F   +Y V V E   I + +A +
Sbjct: 928 DVNDCSPAFIPTSYSVKVLEDLPIGTVIAWL 958



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVQDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            ++ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 SIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  ++ E   +++ + +I
Sbjct: 2187 DKPFYTASIDEDIRVDTPILSI 2208



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            +V+ ++ LDR+         Q   +    + +S+ + +T+ + DINDN P       L  
Sbjct: 3186 IVILEQPLDREQQPSYNISVQATDQSPGQSLSSLAI-VTITVLDINDNPPVFERRDYLVT 3244

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   +  G  KF I+P++G I  +  
Sbjct: 3245 VP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFSINPKTGGISVSEV 3298

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L     +++ + V+A D G  +   +  VSV +   N   P F Q+ Y   +SE A +  
Sbjct: 3299 LDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQDIYSAVISEDALVGD 3358

Query: 173  TV 174
            +V
Sbjct: 3359 SV 3360



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YNLIARATDGGGRFCQSDIRLILEDVNDNPPMFSSDHYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+G+N ++ YS+   +++    F ID  SG++     L   +Q  Y+I+VQATD      
Sbjct: 3159 DVGINRKVVYSL---ADSAGGVFSIDSWSGIVILEQPLDREQQPSYNISVQATDQSPGQS 3215

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS  IV ++V+   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLAIVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  + ++ + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIESSSMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDAEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +  + +D G   S ++V + V    ++    F Q+ Y  ++SE
Sbjct: 1952 MLIAKVSD-GKFYSTSMVNIMVKEAMDS-GLHFTQSFYSTSISE 1993



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)

Query: 32   AASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDL 80
            AA+VP+       TV+++    D+NDN P         I ++      ++ ++ A D D 
Sbjct: 2784 AATVPLDKIDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPVGTKLTQVRAQDVDW 2843

Query: 81   GVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---G 133
            G N ++TYS++  S     +  F ID  +G I T   L      +++ +V A+D G    
Sbjct: 2844 GANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDHETDPEFTFSVLASDLGEAFS 2903

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             SS T+V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2904 LSSTTVVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSTSGLI-LTARMLDHESVQHCTLKVRSTDSGFPSLSSEVLVHIH 2383

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2384 -ISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            ++   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IIYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPTSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPIGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + ++++DINDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D RSGVI  +   K      YS+ V  +D G  +S   V +SV+ G
Sbjct: 2433 I--LSGNDRTSFLMDSRSGVITLSSHRKQRMEPLYSLNVSVSD-GLFTSTAQVHISVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+ Y   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSIYVAEVRENAAAGTKV 2515



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGV+ TT K +  E+   Y + +QAT+  G +S   V + +V   N  +PVF  
Sbjct: 1714 FTINPYSGVV-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV-DENDNAPVFLF 1771

Query: 158  NTYDVNVSEGASINSTVATITVSRL 182
            + Y  ++SE A +NS V  +  S L
Sbjct: 1772 SQYSGSLSEAAPVNSIVRNLDNSPL 1796



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1062 VLQVTARDEDPGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETTSSYWLTV 1118

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ATD G     + +EV + V   N  +P+  +  Y   V E +  + +V  I
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPAVMENSPKDVSVIQI 1170



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREQTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSSIGTEIIQV 853



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           I+ + A D D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V
Sbjct: 491 ILTVSAFDKDKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIV 547

Query: 127 QATDTGG-KSSQTIVEVSVVPGP-NTRSPVFQQ 157
           +A+D G     +  V V++  G  N  SP+F++
Sbjct: 548 RASDWGSPYRHEREVNVTIRIGNVNDNSPLFEK 580



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   + G   +Q ++ +      N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVTNKE-GDLRAQVVIGIE---DANDHTPEFQQA 475

Query: 159 TYDVNVSEGASINSTVATIT 178
            YD  V+E   + +++ T++
Sbjct: 476 QYDTYVNESVPVGTSILTVS 495



 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +++Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQVSYAI--INDFAKDRFLID-GNGQVVTTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG++S   V V VV   N  +P F    Y  +V
Sbjct: 2568 -ISIFLRALDGGGRTSFCTVRVIVV-DENDNAPQFLTVEYRASV 2609


>gi|344281959|ref|XP_003412743.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Loxodonta
           africana]
          Length = 1337

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      Q+ KI ATD D G NAEI+Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GVD 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 509 APSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF  N Y+  V E    + TV  ITV+ L  G
Sbjct: 569 VFTHNEYNFYVPESLPRHGTVGLITVTDLDYG 600



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF-VVPPTNYTY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGL--FIIDETTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           A +   + + V+A D G   S
Sbjct: 741 AADLGLHRLVVKANDLGQPDS 761



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPESLPRHG----TVGLITVTDLDYGENSAVTLSILDVND----DFSIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
               +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 631 FDREKQESYTFHVKAEDAGRVSRSSTAKVTINVV-DVNDNKPVF 673



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  KE LDR+  PN    +  V+A +  G +      + VN+ D+NDN P +    +I 
Sbjct: 308 LITIKEPLDREESPN---HKLLVLASD--GGSMPARAMVLVNVTDVNDNVPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPFNTKIALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           V E  S  + +  I+ +   SG
Sbjct: 475 VPENNSPGTQLTKISATDADSG 496



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIKE 313

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE
Sbjct: 314 PLDREESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPING-TVVLSE 372

Query: 167 GASINSTVATITVS 180
            A  N+ +A ITV+
Sbjct: 373 NAPFNTKIALITVT 386



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +  +   G+  
Sbjct: 129 IEDINDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQL--IKGQGV-- 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF++N  +V++ E A + ++V  +
Sbjct: 241 -DTNDNHPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
            guttata]
          Length = 4576

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYH 92
            SL V++ DINDN P   +    +  A  +       ++++I A   D+  NAEITYSI  
Sbjct: 3203 SLIVSVLDINDNPP---VFEQREYSASVSEDILVGTEVLQIHAASRDIEANAEITYSI-- 3257

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            VS     KF ID  +G I     L   +  +Y +TV+ATD G  S   +V V++ V   N
Sbjct: 3258 VSGNEHGKFSIDSTTGAIFIIESLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDIN 3317

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              SPVF Q+TY   +SE A +  +V T+
Sbjct: 3318 DNSPVFSQDTYTAVISEDAMLEQSVITV 3345



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+          ++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2545 IFTAEKLDRETQAEKVIAISLMAKDSGGKVAFCTVN--VILTDDNDNAPQFRATEYEVNI 2602

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R   ++K+ A+D D G NA+ITYSI   S+       ID  SG+I T   LI  E
Sbjct: 2603 GTDVPRGTSVIKVWASDADEGTNADITYSIEAESDNVEENLEIDSLSGIITTKESLIGLE 2662

Query: 121  QYSIT--VQATDTGGKSSQTIVEV--SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               +T  V+A D G    +++V V   ++P P   +P F +  Y   VSE   I + +  
Sbjct: 2663 NEFLTFLVRAIDGGSPQKESVVPVYARILP-PEVPTPKFSEPFYSYTVSEDIPIGTVIDV 2721

Query: 177  I 177
            I
Sbjct: 2722 I 2722



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + + E LD +  N  +    ++ R++          + VN++D ND+AP    P      
Sbjct: 1509 LYTSEKLDHETMN--QHILTIMVRDQDVPVKRNYARVVVNVSDTNDHAPWFTSPAYEGRV 1566

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
             ++      ++++ A D D G NAEI YSI    N G + F IDP  G+I+   +L    
Sbjct: 1567 YESAAVGSAVLQVTALDKDKGKNAEIVYSI-ESGNIG-NSFLIDPILGMIKIAKELDRSN 1624

Query: 120  -EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E+Y++ V+ATD G      +  V + V   +  SP F    Y   +SE A+I S V  +
Sbjct: 1625 QEEYNLMVKATDKGHPPMSEVTSVHIFVTVSDNASPKFTAKEYSTEISESANIGSFVGMV 1684

Query: 178  T 178
            T
Sbjct: 1685 T 1685



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K+ LDR+  +   +   + A +  GT A+  V + V + D NDN+P         
Sbjct: 2973 WKVYVKKPLDREEKD--NYLLNITATD--GTFAAKAV-VEVKVLDANDNSPVCEKTLYAD 3027

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A   + I+++ ATD D+  NAEITY+++    TG  KFR+ P +G ++T   L  
Sbjct: 3028 SVPEDALPGKLIMQVSATDADIRSNAEITYTLH---GTGAEKFRLTPDTGELKTLMALDR 3084

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +Q  Y + V+ATD GG+  Q  + +  +   N  +P F  +TY + V E
Sbjct: 3085 EQQAVYHLLVKATDGGGRFCQANI-ILTLEDVNDNAPEFTTDTYSITVFE 3133



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 19/197 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            +  +   LDR+    G+   +V   +    A S    + V + D NDN P         R
Sbjct: 1191 ITTTSRKLDRE--QQGEHILEVTVTDNGTPAKSTIARVIVKVLDENDNKPQFLQKFYKIR 1248

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            LP     + +    R  I ++ A D D G NAEI+YSI      G  KF I+P++GV+ +
Sbjct: 1249 LPERGKPERERTARREPIYRVIAADKDEGPNAEISYSIEDGDEHG--KFFIEPKTGVV-S 1305

Query: 113  TGKLIAGEQYSI-TVQATDTG--GKSSQTIVEVSVVPG--PNTRSPVFQQNTYDVNVSEG 167
            + K  A   Y I +++A D G   KSS T + +  +P   P T    F+++ +   V E 
Sbjct: 1306 SKKFSAARDYDILSIKAVDNGRPQKSSTTRLHIEWIPKPIPPTEPIYFEESFFSFTVMES 1365

Query: 168  ASINSTVATITVSRLAS 184
              +   +  I V  L +
Sbjct: 1366 DPVAHMIGVIAVEPLGT 1382



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 6    KENLDRDPPNPGKFRFQV-IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQ 62
            ++NLD +     +F  Q   A E     +SV VS+ V   D NDN P L   P     ++
Sbjct: 2760 EKNLDHETTKWYQFSVQAQYANEDYNVVSSVEVSIQVK--DANDNQPILESNPYEAFIVE 2817

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI--AG 119
               A  ++++++ TD D G+N ++TYS+   S    +  F I+  +G I T  +L     
Sbjct: 2818 NTPAGTRVIQVKGTDLDSGLNGQVTYSLXSFSELDIIESFTINMETGWITTLKELDHEKR 2877

Query: 120  EQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++Y I V A+D G K   SS  +VEV+V    N   P F    Y   VSE
Sbjct: 2878 DKYKIIVVASDRGEKIQLSSMAVVEVTVT-DVNDNPPRFTAEIYKGTVSE 2926



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + ++LDR+      +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1085 IIETADHLDRE--TTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPE 1142

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++IEA D D   + +++Y I   +  G   F I+P++G+I TT + +  
Sbjct: 1143 VMENSPKDVSVIQIEAFDPDSSSSEKLSYKITSGNPQGF--FSINPKTGLITTTSRKLDR 1200

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G  +  TI  V V V   N   P F Q  Y + + E
Sbjct: 1201 EQQGEHILEVTVTDNGTPAKSTIARVIVKVLDENDNKPQFLQKFYKIRLPE 1251



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ +N+ DINDN+P         + + +A   + ++ + A D D   N  + Y+I    
Sbjct: 3307 VTVNINVTDINDNSPVFSQDTYTAVISEDAMLEQSVITVMADDADGPSNNRVHYTIID-G 3365

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            N G + F IDP  G I+ T KL+  E+   Y++TVQA+D G         V++ V   N 
Sbjct: 3366 NQG-NPFTIDPTRGEIKVT-KLLDREKISGYTLTVQASDNGSPPKLNTTTVNIDVSDVND 3423

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PVF +  Y V + E   +  +V  + V+
Sbjct: 3424 NPPVFSKGNYSVIIQENKPVGFSVLQLVVT 3453



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 37   VSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
            V L V + D+NDN P+ +P    ++I+       I+  +EA D DLG ++++ YS+    
Sbjct: 906  VILKVAVEDVNDNPPKFIPSNYHVKIREDLPEGTIITWLEAYDPDLGQSSQVRYSLL--- 962

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GP 148
            ++G   F +D  SG I    +L   ++  Y++TV+A D G     SS   VEV ++    
Sbjct: 963  DSGDGTFDVDKISGAIRIVQRLDYEKKQLYNLTVRAKDKGKPISLSSMCYVEVEIIDVNE 1022

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            N   P F        + E A + S+V T++
Sbjct: 1023 NLHPPQFSIFADKGFIKEDAPVGSSVMTVS 1052



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEIT 87
            G  A V V + V   DINDN P       I    +A      + ++ ATD D G N  I+
Sbjct: 2259 GAHADVFVDIIVE--DINDNPPVFTEQSYIATLSEASVIGTSVAQVSATDADSGTNRGIS 2316

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVS 143
            Y +   ++     F ID  +G+I T   L   +  Q+ + ++A D G    SS TIV V 
Sbjct: 2317 YHLVEDNSESHDYFHIDSSTGLILTAKTLDYEQIKQHKLLIRAVDGGMLPLSSDTIVTVD 2376

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N   P+F Q  Y+  +SE A
Sbjct: 2377 VT-DLNDNPPLFSQLLYEAKISELA 2400



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+         +V    K    A + V +TV   D+NDN P    LP    +++ + E
Sbjct: 2034 FDREQQESFDVVVEVTEENKPSVVAHIVVKVTVE--DVNDNVPFFVNLPYYAAVKVDS-E 2090

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
            A   I ++ A D D G N E+    Y++     H F+IDP +G I    K       ++Y
Sbjct: 2091 AGHIIQRVTAVDKDTGKNGEVR---YYLKEHNEH-FQIDP-TGEISLKKKFEPDTLNKEY 2145

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +TV A D G    S++  V ++V+   +   PVF++  Y   + E   ++S V  +
Sbjct: 2146 LVTVVAKDGGDPAFSAEVTVPITVM---SKAMPVFEKPFYSSEIPENIQLHSPVVHV 2199



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI  T K++  E    Y++TVQ T+  G SS   V V +    N   PVF Q
Sbjct: 1705 FAINPNSGVI-VTQKILDFETLPFYALTVQGTNMAGLSSNATVLVHL-QDENDNPPVFMQ 1762

Query: 158  NTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
              Y   +SE ASINS V T     L    A  +KE N+
Sbjct: 1763 AEYTGLISESASINSVVLTDKNIPLVIRAADADKESNA 1800



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID   G+IET   L       Y +TV 
Sbjct: 1048 VMTVSAYDEDAGRDGEIRYSIRDGSGIGV--FRIDEEKGIIETADHLDRETTSHYWLTVY 1105

Query: 128  ATDTGGKSSQTIVEVSVVPG------PNTRSPVF 155
            ATD G     + +E+ +  G      P T  PV+
Sbjct: 1106 ATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVY 1139



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  N   F  QV         A    ++T+ + DIND  P           ++P  
Sbjct: 1829 SLDYEETNIFHFSVQVHDTGIPRLYAEYAANVTIYVIDINDCPPVFSRELYETSLLVPTY 1888

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +++ + ATD D G+ +++ YSI    N G  KF I+P++G I         
Sbjct: 1889 K------GVKVIGVNATDADSGIFSQLIYSIIE-GNIG-EKFSINPKTGDITVQNTTQLR 1940

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +Y +TV+A+D G  +S   V+++V     ++   F Q++Y   V E ++   T+A ++
Sbjct: 1941 SRYELTVRASD-GRFASTASVKINVKESKASQLK-FTQSSYSATVQENSTEAKTIAVVS 1997



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E +     I+ + A D D G N ++ Y I   +      
Sbjct: 702 HSVNLHAPQFRSTLPSSIEIKEDQPVGSSIISVNAADLDTGFNGKLVYVI--SAGNEDSS 759

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D   GV++    L     ++Y++ +   D G   KS+ T++++ ++   N   P F 
Sbjct: 760 FIVDMEGGVLKILSPLDRELRDKYTLNITVYDLGIPQKSAWTLLDIKILDA-NDNPPEFL 818

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q++Y V VSE    NS +  I
Sbjct: 819 QDSYFVEVSENKEPNSEIIQI 839



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
            + +++ATD D G +  ITY I  V++    +F  + R G I T  KL    Q     +I+
Sbjct: 2508 VTEVKATDEDSGTHGHITYHI--VNDFAKDRFYTNER-GQIFTAEKLDRETQAEKVIAIS 2564

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D+GGK +   V V ++   N  +P F+   Y+VN+       ++V  +  S    G
Sbjct: 2565 LMAKDSGGKVAFCTVNV-ILTDDNDNAPQFRATEYEVNIGTDVPRGTSVIKVWASDADEG 2623



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +TV++ D+NDN P    ++   +I     R   V  ++A+D D     ++ YSI  ++  
Sbjct: 2373 VTVDVTDLNDNPPLFSQLLYEAKISELAPRGHFVTCVQASDADSSDADKLEYSI--LTGN 2430

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
                F I+ ++G+I  +   +      Y + V  +D   +SS   V ++V+   N  SPV
Sbjct: 2431 DQKNFVINSKTGIITISNLRRQTLKSHYKLNVSVSDGVFRSSAQ-VHITVISA-NMHSPV 2488

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F QN Y+V ++E + +++ V  +  +   SG
Sbjct: 2489 FSQNEYEVELAENSPLHTLVTEVKATDEDSG 2519



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I++I ATD DLG N E+ YS+     
Sbjct: 803 LDIKILDANDNPPEF-LQDSYFVEVSENKEPNSEIIQIGATDKDLGANGEVKYSLL---- 857

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ---TIVEVSVVPGPNT 150
           T   KF I+  +GV++  G L   EQ  Y + ++A D   +  Q   T++    V   N 
Sbjct: 858 TDTDKFTINSVTGVVKVVGVLDREEQHIYFLKIEARDQPTEEPQLFSTVILKVAVEDVND 917

Query: 151 RSPVFQQNTYDVNVSE 166
             P F  + Y V + E
Sbjct: 918 NPPKFIPSNYHVKIRE 933



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I+++ ATD D     ++ Y+I   ++   L KFR+DP +G + T+ KL      Q+ +T
Sbjct: 1469 EILQVSATDRD--EKNKLIYTIQGSTDPISLKKFRLDPATGSLYTSEKLDHETMNQHILT 1526

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +   D      +    V V V   N  +P F    Y+  V E A++ S V  +T
Sbjct: 1527 IMVRDQDVPVKRNYARVVVNVSDTNDHAPWFTSPAYEGRVYESAAVGSAVLQVT 1580



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           LTV++   N++AP +  +P    ++  +    IV IE  D+D G+N EI  S+  V+   
Sbjct: 238 LTVHIEQANEHAPVITAVPLTPSESDSDPTYAIVTIE--DSDQGLNGEIA-SLNIVAGDA 294

Query: 98  LHKFRI-----DPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPN 149
           L +F+        +   I+  G +        Y++T+QA D G     + ++V  V  P 
Sbjct: 295 LQQFKTVRSVPGGKEYRIKAIGPIDWESHPFGYNLTLQAKDKGSPPQFSSIKVVHVTSPQ 354

Query: 150 TRS-PV-FQQNTYDVNVSEGASINSTVATI 177
            RS PV F++  Y   +SE A  N+ V  +
Sbjct: 355 FRSGPVRFEKEIYRAEISEFAPPNTPVIMV 384



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 22/131 (16%)

Query: 35  VPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
           V V +T+ LN++NDN P    I      P  +  GE   QI  + A D D     E+   
Sbjct: 546 VEVPVTIILNNLNDNIPLFEKINCEGIIPRDLGVGE---QITTVSAIDAD-----ELQLV 597

Query: 90  IYHV-SNTGLHKFRIDPRSGVIETTGKLIAG-----EQYSITVQATDTGGKSSQTIVEVS 143
            Y + S   L  F ++P SGV+     LI G       YS+ + ATD    +    + ++
Sbjct: 598 RYQIESGNELDLFNLNPNSGVLSLKQSLIDGLGAKMSFYSLKITATDGENFAKPLYINIT 657

Query: 144 VVPGPNTRSPV 154
           V    ++R PV
Sbjct: 658 VA---SSRKPV 665


>gi|344281967|ref|XP_003412747.1| PREDICTED: protocadherin-11 X-linked-like isoform 6 [Loxodonta
           africana]
          Length = 1300

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      Q+ KI ATD D G NAEI+Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GVD 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 509 APSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF  N Y+  V E    + TV  ITV+ L  G
Sbjct: 569 VFTHNEYNFYVPESLPRHGTVGLITVTDLDYG 600



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF-VVPPTNYTY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGL--FIIDETTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           A +   + + V+A D G   S
Sbjct: 741 AADLGLHRLVVKANDLGQPDS 761



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPESLPRHG----TVGLITVTDLDYGENSAVTLSILDVND----DFSIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
               +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 631 FDREKQESYTFHVKAEDAGRVSRSSTAKVTINVV-DVNDNKPVF 673



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  KE LDR+  PN    +  V+A +  G +      + VN+ D+NDN P +    +I 
Sbjct: 308 LITIKEPLDREESPN---HKLLVLASD--GGSMPARAMVLVNVTDVNDNVPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPFNTKIALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           V E  S  + +  I+ +   SG
Sbjct: 475 VPENNSPGTQLTKISATDADSG 496



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIKE 313

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE
Sbjct: 314 PLDREESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPING-TVVLSE 372

Query: 167 GASINSTVATITVS 180
            A  N+ +A ITV+
Sbjct: 373 NAPFNTKIALITVT 386



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +  +   G+  
Sbjct: 129 IEDINDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQL--IKGQGV-- 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF++N  +V++ E A + ++V  +
Sbjct: 241 -DTNDNHPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|344281961|ref|XP_003412744.1| PREDICTED: protocadherin-11 X-linked-like isoform 3 [Loxodonta
           africana]
          Length = 1319

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      Q+ KI ATD D G NAEI+Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GVD 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 509 APSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF  N Y+  V E    + TV  ITV+ L  G
Sbjct: 569 VFTHNEYNFYVPESLPRHGTVGLITVTDLDYG 600



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF-VVPPTNYTY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGL--FIIDETTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           A +   + + V+A D G   S
Sbjct: 741 AADLGLHRLVVKANDLGQPDS 761



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPESLPRHG----TVGLITVTDLDYGENSAVTLSILDVND----DFSIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
               +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 631 FDREKQESYTFHVKAEDAGRVSRSSTAKVTINVV-DVNDNKPVF 673



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  KE LDR+  PN    +  V+A +  G +      + VN+ D+NDN P +    +I 
Sbjct: 308 LITIKEPLDREESPN---HKLLVLASD--GGSMPARAMVLVNVTDVNDNVPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPFNTKIALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           V E  S  + +  I+ +   SG
Sbjct: 475 VPENNSPGTQLTKISATDADSG 496



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIKE 313

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE
Sbjct: 314 PLDREESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPING-TVVLSE 372

Query: 167 GASINSTVATITVS 180
            A  N+ +A ITV+
Sbjct: 373 NAPFNTKIALITVT 386



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +  +   G+  
Sbjct: 129 IEDINDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQL--IKGQGV-- 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF++N  +V++ E A + ++V  +
Sbjct: 241 -DTNDNHPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|344281965|ref|XP_003412746.1| PREDICTED: protocadherin-11 X-linked-like isoform 5 [Loxodonta
           africana]
          Length = 1329

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      Q+ KI ATD D G NAEI+Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GVD 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 509 APSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF  N Y+  V E    + TV  ITV+ L  G
Sbjct: 569 VFTHNEYNFYVPESLPRHGTVGLITVTDLDYG 600



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF-VVPPTNYTY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGL--FIIDETTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           A +   + + V+A D G   S
Sbjct: 741 AADLGLHRLVVKANDLGQPDS 761



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPESLPRHG----TVGLITVTDLDYGENSAVTLSILDVND----DFSIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
               +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 631 FDREKQESYTFHVKAEDAGRVSRSSTAKVTINVV-DVNDNKPVF 673



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  KE LDR+  PN    +  V+A +  G +      + VN+ D+NDN P +    +I 
Sbjct: 308 LITIKEPLDREESPN---HKLLVLASD--GGSMPARAMVLVNVTDVNDNVPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPFNTKIALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           V E  S  + +  I+ +   SG
Sbjct: 475 VPENNSPGTQLTKISATDADSG 496



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIKE 313

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE
Sbjct: 314 PLDREESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPING-TVVLSE 372

Query: 167 GASINSTVATITVS 180
            A  N+ +A ITV+
Sbjct: 373 NAPFNTKIALITVT 386



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +  +   G+  
Sbjct: 129 IEDINDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQL--IKGQGV-- 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF++N  +V++ E A + ++V  +
Sbjct: 241 -DTNDNHPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|344281963|ref|XP_003412745.1| PREDICTED: protocadherin-11 X-linked-like isoform 4 [Loxodonta
           africana]
          Length = 1327

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      Q+ KI ATD D G NAEI+Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GVD 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 509 APSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VF  N Y+  V E    + TV  ITV+ L  G
Sbjct: 569 VFTHNEYNFYVPESLPRHGTVGLITVTDLDYG 600



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPVF-VVPPTNYTY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGL--FIIDETTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           A +   + + V+A D G   S
Sbjct: 741 AADLGLHRLVVKANDLGQPDS 761



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPESLPRHG----TVGLITVTDLDYGENSAVTLSILDVND----DFSIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
               +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 631 FDREKQESYTFHVKAEDAGRVSRSSTAKVTINVV-DVNDNKPVF 673



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  KE LDR+  PN    +  V+A +  G +      + VN+ D+NDN P +    +I 
Sbjct: 308 LITIKEPLDREESPN---HKLLVLASD--GGSMPARAMVLVNVTDVNDNVPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPFNTKIALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           V E  S  + +  I+ +   SG
Sbjct: 475 VPENNSPGTQLTKISATDADSG 496



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIKE 313

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE
Sbjct: 314 PLDREESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPING-TVVLSE 372

Query: 167 GASINSTVATITVS 180
            A  N+ +A ITV+
Sbjct: 373 NAPFNTKIALITVT 386



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +  +   G+  
Sbjct: 129 IEDINDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQL--IKGQGV-- 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF++N  +V++ E A + ++V  +
Sbjct: 241 -DTNDNHPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
          Length = 4557

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            VV+ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VVTTERLDRENPLEGDI--SIFLRALDGGGRTSFCTVRVIVVDENDNAPQFLTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N++ITYS+Y  ++  +     +DP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAMDPDDGANSKITYSLYSEASVSVADLLEMDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q+ Y   ++E  +I +TV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETLLPSFTQSQYSFAIAEDTAIGTTVD 2728

Query: 176  TITV 179
            T+ V
Sbjct: 2729 TLRV 2732



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    V+ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITVSKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSVRVTDQGSPPMSATAIVRISVTMSDNSH-PKFMHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+K+ A D D+G N +I YS+Y   N   
Sbjct: 3017 VTVSDVNDNSPVCDQVAYTALFPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGPGN--- 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            ++F +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   P+F
Sbjct: 3074 NEFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCQSDIRL-ILEDVNDNPPMF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNACVYENTATKALLTRV 3153



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G+I    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTRQFAINSSTGIIYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F   +Y V V E   I + +A +
Sbjct: 928 DVNDCSPAFIPTSYSVKVLEDLPIGTVIAWL 958



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVQDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            ++ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 SIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  ++ E   +++ + +I
Sbjct: 2187 DKPFYTASIDEDIRVDTPILSI 2208



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPM 55
            +V+ ++ LDR+         Q   +    + +S+ + +T+ + DINDN P       L  
Sbjct: 3186 IVILEQPLDREQQPSYNISVQATDQSPGQSLSSLAI-VTITVLDINDNPPVFERRDYLVT 3244

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +P    +      Q++ + AT  D+G NAEITY I   +  G  KF I+P++G I  +  
Sbjct: 3245 VP----EDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG--KFSINPKTGGISVSEV 3298

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L     +++ + V+A D G  +   +  VSV +   N   P F Q+ Y   +SE A +  
Sbjct: 3299 LDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQDIYSAVISEDALVGD 3358

Query: 173  TV 174
            +V
Sbjct: 3359 SV 3360



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YNLIARATDGGGRFCQSDIRLILEDVNDNPPMFSSDHYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+G+N ++ YS+   +++    F ID  SG++     L   +Q  Y+I+VQATD      
Sbjct: 3159 DVGINRKVVYSL---ADSAGGVFSIDSWSGIVILEQPLDREQQPSYNISVQATDQSPGQS 3215

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS  IV ++V+   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLAIVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  + ++ + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIESSSMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDAEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +  + +D G   S ++V + V    ++    F Q+ Y  ++SE
Sbjct: 1952 MLIAKVSD-GKFYSTSMVNIMVKEAMDS-GLHFTQSFYSTSISE 1993



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)

Query: 32   AASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDL 80
            AA+VP+       TV+++    D+NDN P         I ++      ++ ++ A D D 
Sbjct: 2784 AATVPLDKIDIVFTVDVDIKVLDLNDNKPVFETSSYETIIMEGMPVGTKLTQVRAQDVDW 2843

Query: 81   GVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---G 133
            G N ++TYS++  S     +  F ID  +G I T   L      +++ +V A+D G    
Sbjct: 2844 GANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDHETDPEFTFSVLASDLGEAFS 2903

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             SS T+V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2904 LSSTTVVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      ++++ +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSTSGLI-LTARMLDHESVQHCTLKVRSTDSGFPSLSSEVLVHIH 2383

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2384 -ISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            ++   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IIYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPTSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPIGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            + S  V + ++++DINDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 SLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D RSGVI  +   K      YS+ V  +D G  +S   V +SV+ G
Sbjct: 2433 I--LSGNDRTSFLMDSRSGVITLSSHRKQRMEPLYSLNVSVSD-GLFTSTAQVHISVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+ Y   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSIYVAEVRENAAAGTKV 2515



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGV+ TT K +  E+   Y + +QAT+  G +S   V + +V   N  +PVF  
Sbjct: 1714 FTINPYSGVV-TTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIV-DENDNAPVFLF 1771

Query: 158  NTYDVNVSEGASINSTVATITVSRL 182
            + Y  ++SE A +NS V  +  S L
Sbjct: 1772 SQYSGSLSEAAPVNSIVRNLDNSPL 1796



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1062 VLQVTARDEDPGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETTSSYWLTV 1118

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ATD G     + +EV + V   N  +P+  +  Y   V E +  + +V  I
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPAVMENSPKDVSVIQI 1170



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREQTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSSIGTEIIQV 853



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           I+ + A D D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V
Sbjct: 491 ILTVSAFDKDKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIV 547

Query: 127 QATDTGG-KSSQTIVEVSVVPGP-NTRSPVFQQ 157
           +A+D G     +  V V++  G  N  SP+F++
Sbjct: 548 RASDWGSPYRHEREVNVTIRIGNVNDNSPLFEK 580



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   + G   +Q ++ +      N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLEVTNKE-GDLRAQVVIGIE---DANDHTPEFQQA 475

Query: 159 TYDVNVSEGASINSTVATIT 178
            YD  V+E   + +++ T++
Sbjct: 476 QYDTYVNESVPVGTSILTVS 495



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +++Y+I  +++    +F ID  +G + TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQVSYAI--INDFAKDRFLID-GNGQVVTTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI ++A D GG++S   V V VV   N  +P F    Y  +V
Sbjct: 2568 -ISIFLRALDGGGRTSFCTVRVIVV-DENDNAPQFLTVEYRASV 2609


>gi|19924085|ref|NP_612553.1| protocadherin Fat 3 precursor [Rattus norvegicus]
 gi|81867062|sp|Q8R508.1|FAT3_RAT RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
            homolog 3; Flags: Precursor
 gi|19773543|dbj|BAB86869.1| fat3 [Rattus norvegicus]
          Length = 4555

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 8/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2551 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTLEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2668

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                 S  V+A D G     +++ V + V  P T  P F Q+ Y   ++E  SI ST+ T
Sbjct: 2669 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTIAEDTSIGSTIDT 2728

Query: 177  ITV 179
            + +
Sbjct: 2729 LRI 2731



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ D+NDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2072 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++   Y +T+ A D G  S  T VE+ +    N   PVF
Sbjct: 2127 GHFEINPNSGNVILKEAFNSDLSNIDYGVTILAKDGGTPSLSTFVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +++E  SIN+ + +I
Sbjct: 2186 DKPFYTASINEDISINTPILSI 2207



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  + 
Sbjct: 1574 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMT 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ TD G    S+  IV +S+    N+  P F    Y   V+E   I ++V 
Sbjct: 1632 AMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LTVN+ D NDN+P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 816 LTVNVEDANDNSPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 870

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T  H+F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 871 ----TDTHQFVINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 926

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
            ++V ++ LDR+      +   V A ++  G + S   S+T+ + DINDN P       L 
Sbjct: 3185 VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDYLV 3242

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +      Q++ + AT  D+G NAEITY I   +  G  KFRI+P++G I    
Sbjct: 3243 TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVLE 3296

Query: 115  KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             L     +++ + V+A D G  +  T   VS+ +   N   P F Q+ Y   +SE A
Sbjct: 3297 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3353



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YNLIARATDGGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAVDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   G+S
Sbjct: 3158 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 3214

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 3215 LSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3257



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 41   VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V ++D+NDN+P    +      P  I +    + I+K+ A D D+G N +I YS+Y   N
Sbjct: 3016 VTVSDVNDNSPVCDQVAYSASLPEDIPS---NKIILKVSAKDADIGSNGDIRYSLYGSGN 3072

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            +    F +DP SG ++T   L+  E+   Y++  +ATD GG+   + V + ++   N   
Sbjct: 3073 S---DFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCSSTV-LLLLEDVNDNP 3127

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF  N Y   V E  +  + +  +
Sbjct: 3128 PVFSSNHYTACVYENTATKALLTRV 3152



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  + E   +   V  ++V
Sbjct: 1354 PSPIPLTFDEPFYNFTIMESDKVTEIVGVVSV 1385



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 17   GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
              F F V  R+    Q TA S PV + + + D+NDN P     +   + +       +++
Sbjct: 1844 AHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEVL 1902

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            K+ ATD D  V  E+TYS+   S   +  F +DP +GV+      ++ + Y + V+ +D 
Sbjct: 1903 KVSATDPDSEVPPELTYSLMEGS---VDHFLMDPNTGVLTIKNNNLSKDHYMLIVRVSD- 1958

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1959 -GKFYSTAMVTIMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 2003



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  +    + K
Sbjct: 1451 DNNDNGPEFSQ-PHYDVTISEDVPPDTEILQIEATDRD--EKHKLSYTIHSSIDAISMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1508 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSVVLQVT 1588



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYETIIMEGMPVG 2829

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
             ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 2830 TKLAQVRAIDTDWGANGQVTYSLH--SDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPT 2887

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +S  V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2888 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + ++D+NDN P    P       ++      ++++ +TD D G N  + Y
Sbjct: 2264 TGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNNLVHY 2323

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V ATD G    SS+ +V++ 
Sbjct: 2324 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 2381

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L + L+D+ND +P  +P    
Sbjct: 884  IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYS 941

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 942  VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 998

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 999  YEKQQFYNLTVRAKDKG 1015



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT + +  E    Y + +QAT+  G +S   V V VV
Sbjct: 1701 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATVSVQVV 1759

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N   PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1760 -DENDNPPVFLFSQYSGSLSEAAPINSLVRSLDNSPL 1795



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           +++   +K+G A +    +T+ + D ND+ P     +      ++      ++ + A+D 
Sbjct: 442 YKLEVSDKEGDAKA---QVTIGIEDANDHTPEFQETLYETFVNESVPVGTNVLTVSASDK 498

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
           D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G   
Sbjct: 499 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPY 555

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ 157
             ++ V V++ V   N  SP+F++
Sbjct: 556 RHESEVNVTIRVGNVNDNSPLFEK 579



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ A D D G + EI YSI     +GL +F ID  SGVI T   ++  E    Y +TV
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVI-TAADILDRETTASYWLTV 1117

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
             ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1118 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1152



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           +I    +G        + + + D+ND  P   P    + I ++   R  + ++ ATD D+
Sbjct: 127 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 186

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  Y  Y  +   L  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 187 GSNGEFYY--YFKNKVDL--FSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 238



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2361 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  +S
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2514



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYVLNIT 801

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  SPVF Q++Y V++ E +SI + +  +
Sbjct: 802 IYDLGKPQKSSWRLLTVNV-EDANDNSPVFLQDSYSVSILESSSIGTEIIQV 852



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQ+ 
Sbjct: 419 FKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTI----GIEDANDHTPEFQET 474

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+  V+E   + + V T++ S    G
Sbjct: 475 LYETFVNESVPVGTNVLTVSASDKDKG 501



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +++YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 2513 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2568

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2569 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTLEYRASV 2608


>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
          Length = 2617

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 17/187 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
           + ++E LDR+     +    V+    QGT   A  VP+ +TV   D+NDN+P +  P   
Sbjct: 409 ITTREPLDRETKEVHEL---VLEARDQGTPSRATRVPMKVTVL--DVNDNSPEIVDPQRD 463

Query: 58  PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGK 115
            + ++  +    ++ ++ A D D G NA +TYSI    ++ G + F IDP +G+I T   
Sbjct: 464 VVSVREEQPPGTEVARVRALDTDFGENASVTYSILKDRDSDGYNVFTIDPITGMIRTKAV 523

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
           L   E+  Y ++V+ATD G     ++    V V+   + R P F  ++   NV E ASI 
Sbjct: 524 LDHEERNVYRVSVKATDAGHPPRHSVRAFRVEVLALADNR-PTFTSSSLTFNVREDASIG 582

Query: 172 STVATIT 178
             V +++
Sbjct: 583 HAVGSVS 589



 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 19/192 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPP 58
            ++ +  +LDR+      + F V+A +     A   S+PV   +N++D+NDNAP     P 
Sbjct: 1176 VITTAGSLDRE--RQSSYTFLVVAMDSGKYDAKNTSIPVE--INISDVNDNAPVFTKYP- 1230

Query: 59   IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             ++    A    + I+++ A D D G N E+ YS  H       KFRI P +G+I  T  
Sbjct: 1231 FRMDVSTATLPGQNILRVSAHDADEGANGEVLYSFLH--EVEKPKFRIHPTTGMITATLS 1288

Query: 116  LIA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGAS 169
            L    G+ Y + V A D G   ++++ ++E+ +    +  +P   FQ +TY+V V E A+
Sbjct: 1289 LSQDNGKVYHLEVLARDKGNPPQTAKGLIELHIGDRLSDLAPTLKFQNDTYNVIVQENAA 1348

Query: 170  INSTVATITVSR 181
            + + +  I   R
Sbjct: 1349 VGTEIVQIIAVR 1360



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 23/150 (15%)

Query: 31   TAASVPVS-------LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDL 80
            T  S PVS       L V+L D+NDN+P+ P+   ++   GE       +    A+D D 
Sbjct: 1965 TCDSDPVSPRCALAKLRVHLEDVNDNSPKFPVSEYLEF-VGENEPVGTTVFSARASDLDR 2023

Query: 81   GVNAEITYSIYHVSNTGLHK-------FRIDPRSGVIETTGKLIAGEQ---YSITVQATD 130
            G+   + YSI   + TG          F +D +SG++ T   +   EQ   Y+ T++ATD
Sbjct: 2024 GIFGSLNYSIVSAAATGFSDIDDSWKLFAVDDKSGIV-TARAVFDYEQRNRYAFTLRATD 2082

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             GG+++   V V  +   +   P F + TY
Sbjct: 2083 MGGRTAAVRVRVE-IESRDEFYPQFTEKTY 2111



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 12/164 (7%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEAT 76
           R  ++ R   G   S  +SL+V + D+NDN PR        ++  E  R   QI+++ A 
Sbjct: 219 RHSLLIRALDGDGYSANLSLSVEVQDVNDNPPRFER-NEYHVEVPEGARLDSQILQVTAV 277

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK 134
           D D G NA ++Y +      G   FRI+P +G I     L     ++ ++TV A D G  
Sbjct: 278 DLDTGNNARVSYRL-----QGSPAFRINPNTGWIYLVQNLDRETVDRITLTVFAADNGSP 332

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++     V V V   N   P F+++ Y   + E     + V ++
Sbjct: 333 AATANASVLVKVLDDNDNDPRFEKDFYGFKLLENLPSGTLVGSV 376



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 23/196 (11%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-------- 63
            +P    +    V+AR          V + V ++D+NDN       PPI  Q         
Sbjct: 1437 EPRESSRHTLNVVARTVGPDVLEAYVKVIVRVSDVNDN-------PPIFTQTQYSATVLE 1489

Query: 64   GEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID-PRSGVIETTGKLIAG-- 119
            G A+   +VK+ A+D D G+N+ I Y I  V     + F I+ P SG+++T   L     
Sbjct: 1490 GNAKGDFVVKLSASDADQGMNSRILYHI--VDGNPDNAFTINPPYSGIVQTNIVLDREIR 1547

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            E+Y +T+ ATD G         +S+ V   N   P F ++   ++VSEGA + S + TIT
Sbjct: 1548 EKYRLTIIATDQGNPQLTGTTALSIRVIDINDNQPTFPEHNA-ISVSEGAPMGSVLTTIT 1606

Query: 179  VSRLASGCAIMNKEEN 194
             + + S   +  +  N
Sbjct: 1607 ANDVDSSPVLTYRFSN 1622



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 5/151 (3%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K+R  +IA ++     +   +L++ + DINDN P  P    I +  G     ++    T 
Sbjct: 1549 KYRLTIIATDQGNPQLTGTTALSIRVIDINDNQPTFPEHNAISVSEGAPMGSVLTT-ITA 1607

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQ 137
            ND+  +  +TY   ++++ G   F ID   G +    +L A  +   TVQ   + G   +
Sbjct: 1608 NDVDSSPVLTYRFSNLTSPG--PFSIDRYGGKVVLRQRLDAETRSEYTVQVIASDGI-HE 1664

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
            T+ +++V V   N  +P F+Q  Y   +SEG
Sbjct: 1665 TMTDLTVRVTDLNDNTPRFEQAAYVAVLSEG 1695



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 14/163 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           +V   +LDR+  N  ++  ++ A +    G   S+ VS+ + + D NDN PR P   PI 
Sbjct: 622 LVVAHSLDRE--NVSEYHLEIRALDTTSIGNPQSIAVSVKIIIEDANDNPPRWPQ-DPIT 678

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       I  + A+D D G+N E+ Y +          F +D  +G +     L 
Sbjct: 679 VRVSERAAIGSTIYNLTASDLDSGLNGELRYGLV-AEFPSTCSFAVDSLTGALTLAKSLD 737

Query: 118 AGE--QYSITVQATDT---GGKSSQTIVEVSVVPGPNTRSPVF 155
             E  +Y++ ++A+D    G + + T+    +V   N   PVF
Sbjct: 738 REERAEYTLILKASDRAPPGEQLASTVTARIIVLDQNDNDPVF 780



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 58/210 (27%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            ++S  +LDR+     K+   + A++K   +     +LTV + D+NDNAP       +Q Q
Sbjct: 1038 MLSMFSLDRE--TISKYVLTISAKDKGRPSLEAHCNLTVIVLDVNDNAPTF-----LQDQ 1090

Query: 63   AGEARRQ------------------------------------------IVKIEATDNDL 80
              E+  +                                          ++ + ATD D 
Sbjct: 1091 YAESHSRGNSQSLEYGLSNGGFQSSNYPANYHLAKYVTTISEDVAPDSSVMTVRATDPDQ 1150

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKS 135
            G N +ITY+I   ++     FR+D  +GVI T G L    Q  Y+  V A D+G    K+
Sbjct: 1151 GENGKITYAIAEETS---WLFRVDNLTGVITTAGSLDRERQSSYTFLVVAMDSGKYDAKN 1207

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
            +   VE++ +   N  +PVF +  + ++VS
Sbjct: 1208 TSIPVEIN-ISDVNDNAPVFTKYPFRMDVS 1236



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 22/201 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQ-----------VIAREKQGTAASVPVSLTVNLNDINDN 49
           YLV  + +L  DP   G  R +           V++ E +         L + + D+NDN
Sbjct: 88  YLVREEADLSLDPTT-GVLRIRQPLDRESRDKYVLSVEARNGGFVGYCQLELIVEDVNDN 146

Query: 50  APRLPMIPPIQIQAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR 106
            P       ++I   E+    V +    ATD D+  ++ I Y +   SN     F ID +
Sbjct: 147 TPVF-GTSNVRISVPESHSLHVPLYVAYATDPDITPSSPIRYILAQNSN---DLFGIDAQ 202

Query: 107 SGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           SG +    +L    Q  +S+ ++A D  G S+   + V V    N   P F++N Y V V
Sbjct: 203 SGELYLARRLDYETQQRHSLLIRALDGDGYSANLSLSVEV-QDVNDNPPRFERNEYHVEV 261

Query: 165 SEGASINSTVATITVSRLASG 185
            EGA ++S +  +T   L +G
Sbjct: 262 PEGARLDSQILQVTAVDLDTG 282



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 23/178 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPI 59
            LV  + +LDR+     ++   ++AR  +    +   +L V + D NDN+P  R      +
Sbjct: 936  LVTLRGSLDRE--KVARYSVSILARSSKLLDIT---TLEVIVIDENDNSPEFRPNSCYTL 990

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI-------ET 112
             +   +    I  + A+D D G N EI+YSI    N G  KF ++P SG++       ET
Sbjct: 991  AVPENQEIFGIHTVAASDLDEGNNGEISYSIIG-GNIG-SKFTLEPSSGMLSMFSLDRET 1048

Query: 113  TGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
              K      Y +T+ A D G  S +    ++V V   N  +P F Q+ Y  + S G S
Sbjct: 1049 ISK------YVLTISAKDKGRPSLEAHCNLTVIVLDVNDNAPTFLQDQYAESHSRGNS 1100



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 13/148 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           YLV   +NLDR+  +  +    V A +    AA+   S+ V + D NDN PR        
Sbjct: 307 YLV---QNLDRETVD--RITLTVFAADNGSPAATANASVLVKVLDDNDNDPRFEKDFYGF 361

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
           ++        +V  + ATD DL  N+ + YS+   +++    F +DP +G I T   L  
Sbjct: 362 KLLENLPSGTLVGSVNATDPDLDKNSLLRYSVVQSNSS----FAVDPDTGKITTREPLDR 417

Query: 118 -AGEQYSITVQATDTGGKSSQTIVEVSV 144
              E + + ++A D G  S  T V + V
Sbjct: 418 ETKEVHELVLEARDQGTPSRATRVPMKV 445


>gi|449498435|ref|XP_002191035.2| PREDICTED: protocadherin-11 X-linked-like [Taeniopygia guttata]
          Length = 1231

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 14/188 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP    P+I     +      Q+ KI A
Sbjct: 431 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISA 490

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G NAEI+Y +    +     F +D R+G++    KL   +Q  YS TV A D G 
Sbjct: 491 TDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGM 547

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------C 186
              QT   V+V V   N  SP F  N Y+  V E   +  TV  ITV+   +G       
Sbjct: 548 PPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTL 607

Query: 187 AIMNKEEN 194
           +I+N  +N
Sbjct: 608 SILNGRDN 615



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V + N+  D    G + FQV A +      S    +T+N+ D+NDN P   +IP      
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVF-VIPSSNYSY 682

Query: 58  ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P     G     + K+ A DND G+NAE+ YSI   +  GL  F ID  +G I    
Sbjct: 683 ELVPTSASPGSV---VTKVFAVDNDTGMNAELRYSIIGGNARGL--FTIDQLTGNITLKE 737

Query: 115 KLIAGEQ--YSITVQATDTGGKSS 136
           K+IA +   + + ++  D G   S
Sbjct: 738 KVIASDHGLHRLVIKVNDLGQPES 761



 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 27/183 (14%)

Query: 22  QVIAREKQGT---------AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           Q++ RE++ T           S P S    L V + D+NDN P       +++   E   
Sbjct: 205 QILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKE-NDVEVSVPENAP 263

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
               + ++ ATD DLG NA+I +     +S+     F ID  +G+I     L   E   +
Sbjct: 264 VGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVH 323

Query: 123 SITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            +TV A+D     S+  V V+V      VP  +TR  +   N   V +SE A +N+ +A 
Sbjct: 324 KLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGT-VLLSEKAPLNTKIAL 382

Query: 177 ITV 179
           ITV
Sbjct: 383 ITV 385



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------- 51
           ++ +   LDR+  +  ++ F V+A++          ++TV++ D NDN+P          
Sbjct: 521 ILTAVRKLDREKQD--RYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFY 578

Query: 52  ---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
               LPM   + +           I  TD D G NA +T SI +    G   F IDP +G
Sbjct: 579 VPENLPMYGTVGL-----------ITVTDADAGDNAAVTLSILN----GRDNFIIDPLTG 623

Query: 109 VIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
           VI         +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 624 VIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVV-DVNDNRPVF 673



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  +E LDR+       +  V+A +  G++     ++TVN+ DINDN P +    +I P
Sbjct: 308 LITIREPLDRE--ESPVHKLTVLASD--GSSTPSRATVTVNVTDINDNVPSIDTRYIINP 363

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           +       +      +I  I   D D   N ++T    H        FR+ P      ++
Sbjct: 364 VNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV-----PFRLKPVFDNQFLL 418

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           ET   L   A  +Y+I + A+D+G    +Q+ + +  +   N  +PVF Q    +++ E 
Sbjct: 419 ETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPEN 478

Query: 168 ASINSTVATITVSRLASG 185
            +  + +  I+ +   SG
Sbjct: 479 NAPGTQLTKISATDADSG 496



 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+GVN    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK-- 180

Query: 95  NTGLHKFRIDPRSGVIET----------TGKLIAGEQ---YSITVQATDTGG--KSSQTI 139
             G + F +D    + ET            +++  EQ   Y + ++  D G   +SS  I
Sbjct: 181 --GQNVFGLD----ITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V+V    N   PVF++N  +V+V E A + ++V+ +
Sbjct: 235 LQVTVT-DVNDNRPVFKENDVEVSVPENAPVGTSVSQL 271


>gi|66773212|ref|NP_001019372.1| protocadherin 2 gamma 29 precursor [Danio rerio]
 gi|51557458|gb|AAU06415.1| protocadherin cluster 2 gamma 29 [Danio rerio]
 gi|190336893|gb|AAI62335.1| Protocadherin 2 gamma 29 [Danio rerio]
 gi|190339426|gb|AAI62338.1| Protocadherin 2 gamma 29 [Danio rerio]
          Length = 955

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 9/155 (5%)

Query: 37  VSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V + V + D NDNAP   LP+      +       +V++ ATDND G N EITYS    S
Sbjct: 235 VRICVTVIDANDNAPVFSLPVYRVSLFENAPNGAVVVRVSATDNDQGANGEITYSFSRSS 294

Query: 95  NTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
              L  F I   +G I   G L     +Q+ + + ATD GG   SS+ I++++ V   N 
Sbjct: 295 GKNLDLFHIGADTGEITVKGHLDYERAKQFELNIDATDKGGLTDSSKVIIDITDV---ND 351

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             PV    ++   + E A+  + +A + V  L SG
Sbjct: 352 NPPVISLISFSNPIPEDAAPETVIAMLNVKDLDSG 386



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP 58
           Y +++ + LDR+     ++   V A ++   + S   +LT+ ++D+NDNAP         
Sbjct: 411 YSLITDQLLDRE--KISEYNITVTATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTA 468

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGK 115
             ++       ++ ++A D D G NA I+Y +  V   G+       ++  SG I    +
Sbjct: 469 FIMENNSPGVSVLSVKAHDRDSGNNARISYFLEDVVVNGVSASTFISVNAESGEI-LAAR 527

Query: 116 LIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
               EQ   +SI V+A D G     + V V ++
Sbjct: 528 SFDYEQTKDFSIRVKAQDGGSPPLSSNVSVKIL 560


>gi|355691675|gb|EHH26860.1| hypothetical protein EGK_16932 [Macaca mulatta]
          Length = 808

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 FSTIQTKFTIDPSSGEIRTMGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 11/125 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE-------ARRQ 69
            +FQV AR+         V+L V + D NDNAP L  P +  I     E       A   
Sbjct: 531 LQFQVSARDGGVPFLGSNVTLQVFVLDENDNAPALLTPRVGGIGGAVSELVPRSVGAGHV 590

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQ 127
           + K+ A D D G NA ++Y +   +      FR+   +G I TT  L  +   ++ + V 
Sbjct: 591 VAKVRAVDADSGYNAWLSYELQPGTGGARMPFRVGLYTGEISTTRALDEVDAARHRLLVL 650

Query: 128 ATDTG 132
             D G
Sbjct: 651 VKDHG 655



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPVFPMTVKTIRFPESRLLNSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|297295263|ref|XP_002804600.1| PREDICTED: protocadherin alpha-2-like [Macaca mulatta]
          Length = 808

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
           V + + + D+NDN P     +  +++    A    +VK+ A+D D G N+EI YS+   V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +T   KF IDP SG I T GKL   E   Y I V ATD G  S     ++S+ +   N 
Sbjct: 286 FSTIQTKFTIDPSSGEIRTMGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + +SE AS+ + +A ITVS   SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    + S  V+L V + D NDNAP L  +PP    A  A  ++V       
Sbjct: 531 LQFQVSARDGGVQSLSSNVTLQVFVLDENDNAPAL--LPPRAGTAAGAVSELVPWSVGAG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 589 YVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPVFPMTVKTIRFPESRLLNSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F Q+ Y V + E  +  + V  +  S
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNAS 267


>gi|410948461|ref|XP_003980957.1| PREDICTED: protocadherin alpha-11 [Felis catus]
          Length = 741

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
           V L +++ D+NDN P        +++    A+   ++K+ ATD D GVN E+TYS+  V 
Sbjct: 226 VQLFIHVLDVNDNDPEFEQSEYKVRLMENAAKETFVIKLNATDRDEGVNGEVTYSLMSVK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G   F +D  SG +   G L   E   Y I VQATD G    +S   V V ++   N 
Sbjct: 286 PNGKLLFTLDENSGEVRVNGTLDYEENKFYEIEVQATDKGNPPMASHCTVWVEILDA-ND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +P     +  + V E A  ++ +A I+VS   SG
Sbjct: 345 NAPEVTLTSLSLPVREDAQPSTVIALISVSDRDSG 379



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 15/157 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  +V A +K     +   ++ V + D NDNAP + +     P++  A +    I  I  
Sbjct: 315 YEIEVQATDKGNPPMASHCTVWVEILDANDNAPEVTLTSLSLPVREDA-QPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
           +D D G N ++  S+     + + +T  + + +     V+++     +   Y++ V A D
Sbjct: 374 SDRDSGANGQVICSLTPNVPFKIVSTFKNYYSL-----VLDSALDRESVSDYALVVTARD 428

Query: 131 TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            G  S      VSV V   N  +P F Q  Y V V E
Sbjct: 429 GGSPSLSATASVSVEVADVNDNAPAFAQAEYTVFVKE 465


>gi|31210749|ref|XP_314341.1| AGAP004850-PA [Anopheles gambiae str. PEST]
 gi|30176549|gb|EAA09721.2| AGAP004850-PA [Anopheles gambiae str. PEST]
          Length = 3543

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 9/175 (5%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQ 69
           D  N   +R  + A++    + S    L VN+ D NDNAPR          +++      
Sbjct: 668 DYENVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYN 727

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           IV+++A D+D G N+EITYSI +  + G+    +DPR+G I TT  L   EQ  YS  V 
Sbjct: 728 IVRVQAYDSDEGANSEITYSIQN-RDDGM-PLAVDPRTGWIHTTKALDREEQSRYSFQVV 785

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   KS+ T V V+ +   N   P F    Y+  ++E     + V T+T +
Sbjct: 786 AVDGGIPPKSASTSVIVT-IQDVNDNDPTFSPKYYEAMLAEDQPPGTPVTTVTAT 839



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 91/220 (41%), Gaps = 40/220 (18%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPI 59
           +V +   LDR+  +   FR  VIA +      S   +L VN+ D ND+ P          
Sbjct: 419 VVTTSSTLDRELMDVHYFR--VIATDDSFPPRSGTTTLQVNVLDCNDHTPTFEAEQFHAT 476

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV------------------------SN 95
             +       ++ I ATD D+G NA+I Y+I  +                        SN
Sbjct: 477 VREGVSVGSTVITIRATDQDIGKNADIEYAITSILGENQEQSGTAANGSNEGNPVEGDSN 536

Query: 96  TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-----KSSQTIVEVSVVPG 147
               KFRID RS  I T   L   ++G  Y+I V ATD        KS+ T V V ++  
Sbjct: 537 GSSQKFRIDARSCTISTRSALDREVSG-MYTIMVTATDMATPQSERKSATTTVLVKIL-D 594

Query: 148 PNTRSPVFQQNTYDVNVSE--GASINSTVATITVSRLASG 185
            N   P F + TY V V E   A+ N+ +A I  S    G
Sbjct: 595 DNDNYPQFSERTYTVQVREDQWANENNVIAHIQASDADQG 634



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQ 60
            +++   LDR+  +   +   V A++    + S    + +++ D+NDNAP  ++P+     
Sbjct: 979  IITNAKLDRE--STSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPVFKVPLYQATI 1036

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       +V+I ATD D+G+N  + Y++    +     F +DP SGVI T   L    
Sbjct: 1037 PEDALIGTSVVQIAATDLDMGLNGRVKYALGQ-KDMDEGSFVVDPISGVIRTNKGLDRES 1095

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +T  A+D G  +  + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1096 IPVYHLTAIASDKGTPTMSSSVEVQIRLDDVNDSPPTFASDKLTLYVPENSPVGSVVGEI 1155



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +N+ D N+ AP     P      +       ++ + A+D+D+G+NA+ITY +   S  GL
Sbjct: 905  INITDANNFAPVFENAPYSASVFEDAPIGTTVLVVSASDSDVGINAQITYLLNDESVNGL 964

Query: 99   ---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F I+ ++G I T  KL   +   Y +TV A D G    S  T VE+SV    N  
Sbjct: 965  GANEPFTINAQTGAIITNAKLDRESTSGYLLTVTAKDGGNPSLSDTTDVEISVT-DVNDN 1023

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +PVF+   Y   + E A I ++V  I  + L  G
Sbjct: 1024 APVFKVPLYQATIPEDALIGTSVVQIAATDLDMG 1057



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  +P F
Sbjct: 411 FKVDSRTGVVTTSSTLDRELMDVHY-FRVIATDDSFPPRSGTTTLQVNVLDC-NDHTPTF 468

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   +   V EG S+ STV TI
Sbjct: 469 EAEQFHATVREGVSVGSTVITI 490



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 14/185 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLP-MIPP 58
           + ++  LDR+    G +   V A +    Q    S   ++ V + D NDN P+       
Sbjct: 551 ISTRSALDREVS--GMYTIMVTATDMATPQSERKSATTTVLVKILDDNDNYPQFSERTYT 608

Query: 59  IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +Q++  +   +   I  I+A+D D G NA I Y+I  +      +F ID  SG +     
Sbjct: 609 VQVREDQWANENNVIAHIQASDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSLVKP 666

Query: 116 LIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
           L       Y + ++A D G  S     ++ V V   N  +P F  + +   V E   +  
Sbjct: 667 LDYENVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGY 726

Query: 173 TVATI 177
            +  +
Sbjct: 727 NIVRV 731


>gi|348538599|ref|XP_003456778.1| PREDICTED: cadherin-12-like [Oreochromis niloticus]
          Length = 848

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDN P+ P  P     P    AG    Q+   +A D   G +A I YSI H 
Sbjct: 170 FIIKVQDINDNEPQFPDGPYSASVPEMSPAGTYVTQVTATDADDPTYGNSARIVYSILH- 228

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTGGK----SSQTIVEVSVVP 146
              G   F +DP++G+I T    +     E+Y + +QA D GG+    +S TI+ +++  
Sbjct: 229 ---GQPYFSVDPKTGIIRTALANMDREVKEEYQVLLQAKDMGGQLGGLASTTIINITLT- 284

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N   P F ++ + ++V E AS+ + V  I    L  G
Sbjct: 285 DVNDNPPRFTKSIFHLHVPESASLGAAVGRIQAQDLDVG 323


>gi|334325928|ref|XP_001372408.2| PREDICTED: cadherin-19 [Monodelphis domestica]
          Length = 799

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 19/187 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + + + LDR+  +  K R QVI     G          + + DINDN P   +  P +  
Sbjct: 127 ITAIKKLDREEKSYYKLRGQVIDV-VTGKPVEPESEFVIKVLDINDNQPEF-LEGPYETS 184

Query: 63  AGEARRQ---IVKIEATDND---LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             E   +   ++++ ATDND    G NA + YSI      G   F ++P +GVI  + ++
Sbjct: 185 IPEMSPEGTSVIQVTATDNDDPSHGNNARLIYSILQ----GRPYFSVEPTTGVIRISSQM 240

Query: 117 I--AGEQYSITVQATDT----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A +QY + VQATD     GG S  T V +++    N   P+FQ   Y +NVSE A +
Sbjct: 241 DREAEDQYLVVVQATDMLGLPGGLSGTTTVTINL-SDVNDNRPIFQFGLYHMNVSESAPV 299

Query: 171 NSTVATI 177
            +++  I
Sbjct: 300 GTSIGAI 306



 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 27/159 (16%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++T+NL+D+NDN P     +  + + ++      I  I A D+D+G NA++ YSI     
Sbjct: 269 TVTINLSDVNDNRPIFQFGLYHMNVSESAPVGTSIGAILAEDSDIGDNAKMNYSI----E 324

Query: 96  TGLHKFRI----DPRSGVIETTGKLI--AGEQYSITVQATDT-----------GGKSSQT 138
            G + F I    + + G++    KL      QYS+  + T++            G+++  
Sbjct: 325 DGSYFFDIITNNETQEGIVILKQKLDYELQRQYSVRAKVTNSYIDEYFPKDENSGQTTVI 384

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + V  V  P    PVF    Y + ++E     S V T+
Sbjct: 385 KIRVEDVDEP----PVFSYLEYVMEIAEETPYGSHVGTV 419


>gi|355691685|gb|EHH26870.1| hypothetical protein EGK_16946 [Macaca mulatta]
          Length = 801

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDREAE--AELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G IE   +L   
Sbjct: 252 ISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  + + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGGFSGKCTILIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377



 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 24/169 (14%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +++++ LDR+  +  ++   +   +      +  +++TV ++D+NDN P    I    
Sbjct: 402 YTLLTEKPLDRE--SRAEYNVTITVTDLGTPRLTTHLNMTVLVSDVNDNVPAFTQISYTL 459

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET---TGK 115
              +       I  + ATD D   NA++TYS+    +  L      P S ++ T    G 
Sbjct: 460 FVRENNSPALHIGSVSATDRDSSTNAQVTYSLLPPQDQHL------PLSSLVSTNADNGH 513

Query: 116 LI--------AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
           L         A +++   V+A D G    SS+ +V V V+   N  SP 
Sbjct: 514 LFALRSLDYEALQEFEFRVRAADRGSPALSSEALVRVLVLDA-NDNSPF 561


>gi|426350403|ref|XP_004042764.1| PREDICTED: protocadherin alpha-11, partial [Gorilla gorilla
           gorilla]
          Length = 560

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P        + +    A+  +V K+ ATD D GVN E+TYS+  + 
Sbjct: 196 VRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIK 255

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G H F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 256 PNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 314

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  ++ +A I+VS   SG
Sbjct: 315 NSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSG 349



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++  A +    I  I  
Sbjct: 285 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 343

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     +   Y + V A D G  
Sbjct: 344 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRESVWAYELVVTARDGGSP 402

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q+ Y V + E
Sbjct: 403 SLWATARVSVEVADVNDNAPAFAQSEYTVFMKE 435


>gi|348570608|ref|XP_003471089.1| PREDICTED: protocadherin-11 X-linked-like [Cavia porcellus]
          Length = 1102

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP    +  I +   E      Q+ KI ATD D G NAEI+Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQLF-ISLSVPENNSPGTQLTKISATDADNGQNAEISYLL---GV 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +DPR+GV+    KL     E+Y  TV A D G  S  T   V V V   N  S
Sbjct: 508 DAPSEFNLDPRTGVLTAVNKLDREKQEKYYFTVLAKDNGIPSLMTNATVFVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PVF  N Y+  V E    + TV  ITV+
Sbjct: 568 PVFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++P      
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSHSSTAKITINVVDVNDNKPGF-VVPSSNHSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      I K+ ATDND G+N+E+ YSI   +  GL  F ID ++G I    K +
Sbjct: 683 ELVLPSTNPGTVIFKVVATDNDTGLNSELRYSIVGGNTKGL--FVIDQKTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+  D G  +S
Sbjct: 741 IADLGLHRLVVKVKDLGQPNS 761



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 28/161 (17%)

Query: 39  LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
           L V+++D NDN P          +P   PI          + ++ ATD D+G NA I + 
Sbjct: 235 LQVSVSDTNDNHPVFREQEIEVSIPENAPIG-------TSVTQLHATDADIGENARIHFY 287

Query: 90  IYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV- 144
             + +SN     F ++  +G+I T  +L+  E+   + + V A+D G   ++ IV V++ 
Sbjct: 288 FSNLISNIAKKLFHLNTTTGLI-TIKELLDREEAPSHKLLVLASDGGSVPARAIVLVNIT 346

Query: 145 -----VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                +P  + R  +   N   V +SE A +N+ VA ITV+
Sbjct: 347 DVNDNIPSIDIRYIISPTNG-TVILSENAPLNTKVALITVT 386



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 18/144 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQ 62
           LDR+     K+ F V+A++    +     ++ V + D NDN+P          +P    +
Sbjct: 528 LDREKQE--KYYFTVLAKDNGIPSLMTNATVFVTVLDQNDNSPVFTHNEYNFYVPENLPR 585

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            G     +  I  TD D G N+ +T SI  +S+    +F IDP++GVI         +Q 
Sbjct: 586 HG----TVGLITVTDPDYGENSAVTLSISDMSD----EFTIDPQTGVIRPNISFDREKQE 637

Query: 122 -YSITVQATDTGGKSSQTIVEVSV 144
            Y+  V+A D G  S  +  ++++
Sbjct: 638 SYTFYVKAEDGGRVSHSSTAKITI 661


>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
 gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
          Length = 2864

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 9/183 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           + ++++LDR+      +   V AR++     S  VS+ V + D+NDNAP +  P    + 
Sbjct: 585 ITTRDSLDRE--TKASYDLVVEARDQGTPYRSSRVSVKVQILDVNDNAPDIVDPQEDVVS 642

Query: 61  IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
           ++  +    ++VK+ A D D G NA I+YSI    ++ G   F IDP SGVI T   L  
Sbjct: 643 VREEQPIGTEVVKVRAIDRDHGQNASISYSILKGRDSDGYGMFSIDPMSGVIRTKTSLDH 702

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            E+  Y + V ATD G    QT+  + + V   N   P F  ++    + E   +   + 
Sbjct: 703 EEKTIYRLAVAATDNGKPPKQTVRLLRIEVLDLNDNRPTFTSSSLVFRLREDVGVGHIIG 762

Query: 176 TIT 178
           +I+
Sbjct: 763 SIS 765



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 21/174 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPP 58
            L+ + + LD D    G+ ++ ++ R     +A   SV    T+ L+D NDN P+ P +P 
Sbjct: 2132 LLYTNKYLDYDH---GQTQYSLVVRACDSHSAPRCSVH-PFTIALSDENDNEPQFP-VPE 2186

Query: 59   IQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV---SNTGLHK----FRIDPRSG 108
                 GE       I    ATD D G    + Y+I  V   + +GL      F++DP SG
Sbjct: 2187 YLEFVGENEPIGISIFTARATDMDRGPFGTVNYTIDSVLSGAYSGLDDSWKLFKVDPTSG 2246

Query: 109  VIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            V+ +       E+  Y+  ++ATDTGGKS    V++ V+   +  SP F + TY
Sbjct: 2247 VVNSNAVFDYEEKNRYAFALRATDTGGKSKTVRVKI-VIESRDEFSPQFTERTY 2299



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 16/183 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG--- 64
             DR+  N   + F V+A +  +  A S  V + V + D+NDN P     P  + Q G   
Sbjct: 1377 FDRERQN--VYNFMVVAMDGGRYNARSQNVPVQVIIADVNDNKPVFDKYP-FREQIGALV 1433

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQY 122
            +  + ++ I ATD+D G N EI YS+   ++ G  KFRI+P +G +  T  L +  G   
Sbjct: 1434 QPGQTLLHISATDSDQGSNGEIVYSLNENASNG--KFRINPTTGALSATQSLASENGRLL 1491

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSEGASINSTVATIT 178
             I V A D G   + +  ++E+ V        PV  FQ ++Y V +SE   +   V  ++
Sbjct: 1492 HIEVTARDKGNPPQIATGLIELRVGE-VQQELPVLRFQNSSYRVTLSENTPVGQPVLQLS 1550

Query: 179  VSR 181
              R
Sbjct: 1551 AVR 1553



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 20/184 (10%)

Query: 23  VIAREKQGT-AASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDND 79
           V+     GT + S  +++ V + D+NDNAP           I++  +  QI+++ ATD D
Sbjct: 378 VVTASDSGTPSLSTNLTILVEVQDVNDNAPIFEKNEYAISVIESTPSNSQILQVSATDAD 437

Query: 80  LGVNAEITYSIYHVSNTGLHK--------------FRIDPRSGVIETTGKLI--AGEQYS 123
            G NA +TY I    +    K              F I P SG I    KL     E+Y+
Sbjct: 438 TGNNARLTYKILGEDHQRTGKSTQPASPDEPVAEIFGIFPNSGWIYLRTKLDREVKERYN 497

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           ITV  +D G  +      V V +   N  SP+F ++ Y+  + E     + + T++ S  
Sbjct: 498 ITVIVSDNGVPTLTATAHVIVTILDANDNSPIFAKSLYEFEIEENMRRGAMIGTVSASDS 557

Query: 183 ASGC 186
            +G 
Sbjct: 558 DAGI 561



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D+ND+AP        P+ +        I  + ATD D G+N EITYSI    N
Sbjct: 1195 TLVVRVTDVNDHAPEFVQGSCYPLAVPENSELSVIHTVVATDADDGLNGEITYSISG-GN 1253

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK-SSQTIVEVSV-VPGPNT 150
             G +KF ID  +G +  T + +  E   +Y + + A D G   S Q    +++ V   N 
Sbjct: 1254 MG-NKFSIDLHTGAL--TARPLDREVHARYVLQITAQDRGSPVSHQGHCNITIRVEDEND 1310

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              P F+   Y   + E A I +TV T+
Sbjct: 1311 NDPKFELQKYIATIDEDAQIGTTVLTV 1337



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVS------LTVNLNDINDNAPRLPMIPPIQIQ 62
            LDR+     ++  Q+ A+++       PVS      +T+ + D NDN P+  +   I   
Sbjct: 1272 LDREVH--ARYVLQITAQDRGS-----PVSHQGHCNITIRVEDENDNDPKFELQKYIATI 1324

Query: 63   AGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
              +A+    ++ ++A D D+G+NA I YS+ +V+      F ID ++GVI T G      
Sbjct: 1325 DEDAQIGTTVLTVKAIDADVGINARIVYSLANVTE---WLFDIDSKTGVITTAGLFDRER 1381

Query: 121  Q--YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQ 157
            Q  Y+  V A D G    +S    V+V ++   N   PVF +
Sbjct: 1382 QNVYNFMVVAMDGGRYNARSQNVPVQV-IIADVNDNKPVFDK 1422



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 15/178 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-----IVK 72
           + F +IA ++ G + +  V   + L D+NDN P   P    + ++            +V 
Sbjct: 51  YEFPIIATDRGGLSTTAMVK--IQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVV 108

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQA 128
           + ATD+D G    I+Y I   +  G+  FR+D  +G I  T   +   +    + + + A
Sbjct: 109 VVATDSDSGSFGTISYRIVAGNEAGI--FRMDRLTGEIFVTRPNMLSSRTQPYHRLNISA 166

Query: 129 TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +D GG  S    EV + V     R P+F +  Y   V E    N+ V T++ +   SG
Sbjct: 167 SDGGGLRSTHDAEVFISVIDATQRPPIFDKPRYTYYVKEDVKRNTVVGTVSATSSNSG 224



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSN 95
            S+TV L D NDNAPR         +  G ++   ++K+ A D+D G NA I Y I  V  
Sbjct: 1623 SITVELRDENDNAPRFTQQQYAASVWEGNSKGTFVIKVGAFDSDQGANARILYHI--VDG 1680

Query: 96   TGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATDTG-GKSSQTIVEVSVVPGPNTR 151
               + F I+P  SG+++T   L     ++Y + V ATD G  + + T      V   N  
Sbjct: 1681 NHDNAFIIEPAFSGIVKTNIVLDREIRDKYKLKVIATDEGVPQMTGTATINVNVVDVNDN 1740

Query: 152  SPVFQQNTYDVNVSEGASINSTVATIT 178
             P F  NT  ++VSE  S+ + + TIT
Sbjct: 1741 QPTFPPNTV-ISVSEATSVGTVLTTIT 1766



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 21/162 (12%)

Query: 39  LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           + +++ D+NDN P        +  P  ++ G     + +  A D D G++  ITY +   
Sbjct: 284 VNIDIEDVNDNPPEFESNTVRISVPENVEIGSP---LYEANAQDKDSGMSGVITYMLAGQ 340

Query: 94  SNT--GLHK--FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVS 143
            NT  G     F +D RSG +     L   + +++++ V A+D+G  S  T    +VEV 
Sbjct: 341 GNTLSGARSSLFSMDSRSGHLTLARPLDYESMQRHTLVVTASDSGTPSLSTNLTILVEVQ 400

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V   N  +P+F++N Y ++V E    NS +  ++ +   +G
Sbjct: 401 DV---NDNAPIFEKNEYAISVIESTPSNSQILQVSATDADTG 439



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV+++ LDR+  +  +   + +         S  V++ + + D+NDN P+ P   PI +
Sbjct: 809 LVVARQ-LDREQQSEYRMEIRALDTSASNNPQSSAVTVKIEIADVNDNPPKWPS-DPINV 866

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI 117
              E       +      DND G NAEI Y++   ++    + F ID  +G +     L 
Sbjct: 867 YVSEDTPVGAIVYNFTVQDNDTGTNAEIKYNLSKPAHLAQKEYFAIDSLTGSLTLLAPLD 926

Query: 118 A--GEQYSITVQATD 130
               +++ + VQATD
Sbjct: 927 HEDTQEFLLIVQATD 941



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           + ATD D GVNA + Y++      G  K   F I P +G +    +L    +  Y   + 
Sbjct: 1   VSATDPDCGVNAMVNYTL----GEGYKKNAEFEIRPSTGEVCIASELDYETRNSYEFPII 56

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           ATD GG S+  +V++ +    + R P F    Y+V++ E    NS ++T  V  +A+
Sbjct: 57  ATDRGGLSTTAMVKIQLTDVNDNR-PTFYPREYNVSLRESMPTNSLLSTPVVVVVAT 112



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 32/180 (17%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVK 72
            +F  +++A +    A +   +LTV + D+NDNAP    I    +             I+ 
Sbjct: 1814 EFLLRLLASDSAHVART---TLTVRVVDVNDNAPVFQQITYHAMLSDSTDGSNTNVMILS 1870

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI----------AG 119
            + ATD D   NA + YSI  V   G+     F ID      E+TG+L           AG
Sbjct: 1871 VNATDADSEPNAIVRYSI--VPPKGMVMASGFTID------ESTGQLFANVSQLSTSGAG 1922

Query: 120  EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                +TV+ATD+G    SS T V +  +      +P + Q+ Y V+++E A   +TV  +
Sbjct: 1923 GTLYLTVRATDSGQPALSSTTTVRLE-MKSKGKANPQYIQSQYRVSMNEEALPGTTVVNL 1981



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG 64
           +  LDR+     ++   VI  +      +    + V + D NDN+P     +   +I+  
Sbjct: 485 RTKLDREVKE--RYNITVIVSDNGVPTLTATAHVIVTILDANDNSPIFAKSLYEFEIEEN 542

Query: 65  EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
             R  ++  + A+D+D G+NA + YS+   SNT    F+I+P SG I T   L       
Sbjct: 543 MRRGAMIGTVSASDSDAGINAVVRYSLIP-SNT---SFQINPVSGEITTRDSLDRETKAS 598

Query: 122 YSITVQATDTGG--KSSQTIVEVSVV 145
           Y + V+A D G   +SS+  V+V ++
Sbjct: 599 YDLVVEARDQGTPYRSSRVSVKVQIL 624



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 15/105 (14%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQA--GEA---RRQIVKIEATDNDL--GVNAEITYS 89
            + + V + D NDNAP      P   +A  GE    +  I K+ A D DL    ++E+ Y 
Sbjct: 2058 IRVIVTVEDANDNAPEF---QPGSYEATIGELAPIKHSIAKLSALDADLSGSPSSEVIYQ 2114

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDT 131
            I   +++G+  F ID  SG++ T   L       QYS+ V+A D+
Sbjct: 2115 IISGNDSGM--FSIDLVSGLLYTNKYLDYDHGQTQYSLVVRACDS 2157


>gi|348524466|ref|XP_003449744.1| PREDICTED: protocadherin Fat 1 [Oreochromis niloticus]
          Length = 4614

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 25/189 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLT-VNLNDINDNAPRLPMIPPIQI 61
            + + E+LDR+          ++A++     A V  S+  V L D NDNAP        Q 
Sbjct: 2549 IFTLESLDRENTEEKVIPISLMAKDG---GAKVGFSIVNVILTDANDNAP--------QF 2597

Query: 62   QAGEARRQI----------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            +AGE +  I          VK+ A+D D G NA+I YSI   +      F I P SGVI 
Sbjct: 2598 RAGEYKATIASDVPRGTSVVKVAASDTDEGSNADIEYSIEADAENVEENFEIHPTSGVIV 2657

Query: 112  TTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            T   LI    E Y+  V+A DTG     ++V+V + +  P T  P F +  Y   + E  
Sbjct: 2658 TKESLIGLENELYAFFVRAKDTGNPPKYSVVQVYIRIVAPETPIPKFAEPHYRYTIPEDL 2717

Query: 169  SINSTVATI 177
             I + +  I
Sbjct: 2718 PIGTEIDVI 2726



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +  +  A ++     S    + +++ DINDN P           + +     Q++++ A 
Sbjct: 3198 YELKARASDQGSPRLSSLCQVVISVLDINDNPPVFEHREYTATVSEDVAVGTQVLRVHAA 3257

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTGG 133
              D   N EITYSI   +  G+  F +DP++G   VIE      A  +Y IT++ATD G 
Sbjct: 3258 SRDADANGEITYSIISGNEHGM--FSVDPKTGDVFVIEPL-DYEASHEYYITIEATDGGS 3314

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 +  V++ +   N   PVF Q+ Y   +SE A +  TV  +
Sbjct: 3315 PPLSDMATVNINLTDVNDNRPVFSQDVYTAVISEDAELGKTVMAV 3359



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 21/193 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----- 55
            + V  ++ LDR+  +   +   + A +   TA +V   + V + D NDN+P         
Sbjct: 2979 WKVSVRKPLDREEKD--NYLLNITASDGIFTAKAV---VEVKVLDANDNSPVCDKSVYSE 3033

Query: 56   -IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +   A R I+++ ATD D+  NA+I+Y +  V   G   F ID  +G ++T+ 
Sbjct: 3034 SVP----EDSPAGRLILQVSATDADIRSNAQISYELQGV---GSELFIIDFVTGELKTSQ 3086

Query: 115  KLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   E  +YS  V+A D GG+  ++ + + +V   N   P F  + Y + V E     +
Sbjct: 3087 PLDREEKDEYSFKVRAVDGGGRYCESDIHI-IVEDVNDNPPQFSSDPYTITVFENTETGT 3145

Query: 173  TVATITVSRLASG 185
             VA ++ + L +G
Sbjct: 3146 FVAKLSANDLDTG 3158



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 17/159 (10%)

Query: 34   SVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGE--------ARRQIVKIEATDNDLGVNA 84
            S  V + V + D NDN P  L  I  IQ+   E         R  + ++ A+D D G NA
Sbjct: 1225 STTVRVIVQVLDENDNRPLFLEKIYKIQLPERERPENERAMKRYPVYRVIASDRDDGPNA 1284

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEV 142
            EI+YSI      G  KF I+P++G++ +     AGE   +T++A D G   KSS   + +
Sbjct: 1285 EISYSIEDGDEHG--KFFIEPKTGLVSSKKFSSAGEYDILTIKAVDNGRPQKSSTCRLHI 1342

Query: 143  SVVPGPNT---RSPV-FQQNTYDVNVSEGASINSTVATI 177
              +P P      +P+ F+++ +  +V E   +   V  +
Sbjct: 1343 EWIPKPQVPADAAPLAFEESPFTFSVMESDPVAHMVGVV 1381



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ ++E LDR+      +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1089 IIRTQELLDRE--TTSHYWLTVYAMDRGVVPLSAFVEVYIEVQDVNDNAPQTSEPVYYPS 1146

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       I++I A D D   + ++TY I   +  G   F I+ ++G++ TT + +  
Sbjct: 1147 VMENSAKDVSIIQINAVDPDAKASDKLTYKITSGNPQGF--FAINTKTGLVTTTSRKLDR 1204

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     T V V V V   N   P+F +  Y + + E
Sbjct: 1205 EQQDEHILEVTITDHGVPPKSTTVRVIVQVLDENDNRPLFLEKIYKIQLPE 1255



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 18/162 (11%)

Query: 24   IAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDL 80
            + RE Q +     V +TV + DINDNAP    LP    +Q+ A E  + I ++ A D D+
Sbjct: 2054 VTREDQ-SEDKAHVLVTVTVEDINDNAPMFVNLPYHALVQVDAEEG-QVIRQVTAVDKDI 2111

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKS 135
            G NA I Y +    +     F+I P SG I    K         + I V A D+G    S
Sbjct: 2112 GPNANIQYQLKEQHD----HFQISP-SGEISLKNKFEKEALNTNFVIVVMAKDSGQPALS 2166

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V V VV   N   PVF++  Y + + E   ++S V  +
Sbjct: 2167 AEIEVPVRVV---NKAMPVFEKPFYSIEIPENIQLHSPVLHV 2205



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 12/174 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEA 66
            LDR+  +  ++ F+V A +  G      + + V   D+NDN P+    P      +  E 
Sbjct: 3088 LDREEKD--EYSFKVRAVDGGGRYCESDIHIIVE--DVNDNPPQFSSDPYTITVFENTET 3143

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               + K+ A D D G+N++I YS+   S  G   F +D  +GVI     L    Q  Y +
Sbjct: 3144 GTFVAKLSANDLDTGLNSDILYSLVE-SADGF--FSVDESTGVITLERPLDREVQSVYEL 3200

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +A+D G     ++ +V + V   N   PVF+   Y   VSE  ++ + V  +
Sbjct: 3201 KARASDQGSPRLSSLCQVVISVLDINDNPPVFEHREYTATVSEDVAVGTQVLRV 3254



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + L D+NDNAP   +         EA      +++++A D+D G N E+ 
Sbjct: 2262 TGAHSEVFVDIILEDVNDNAPVF-LSKTYYANISEASVIGTSVLQVDAKDSDTGNNQEVF 2320

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVS 143
            + +          F ID  +G+I T   L   E  Q+ + V+  D G    SS  IV + 
Sbjct: 2321 FQLVEERGKSSDYFTIDRNTGIISTAQVLDHEEIQQHKLRVRVVDGGVPALSSDIIVTID 2380

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V    N  +PVF ++TY   +SE A     V+ +  S
Sbjct: 2381 VT-DLNDNAPVFTEHTYRTTISELAPRGHFVSQVQAS 2416



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            V L + L D+NDN P+    PP  +++  E       I+ +EA D D+G ++++ YS+  
Sbjct: 910  VPLKITLEDVNDNPPKF--FPPNYRVKVREDLPIGTVIMWLEAHDPDIGPSSQVRYSLI- 966

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +     L     + Y++T +A D G     SS   +EV VV  
Sbjct: 967  --DNGDGNFEVDKLSGALRIVQNLDYETKQVYNLTAKAKDKGKPISLSSTCFIEVDVVDV 1024

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N   P+F+       + E A I ++V T+T
Sbjct: 1025 NENLYRPMFRSFVEKGFIKEDAVIGTSVMTVT 1056



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 8/163 (4%)

Query: 19   FRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIE 74
            FRF V   +       A    ++T+ + D+ND AP L         I       +++++ 
Sbjct: 1844 FRFTVQVHDLGMPRLFAETTANVTIEVIDVNDCAPVLSQEQYEATVIVPTYKGVEVIQVS 1903

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
            ATD D G N+++ +SI    N G  KF++DP +G+I          +Y + V+ +D G  
Sbjct: 1904 ATDADSGPNSKLLFSISE-GNIG-DKFKMDPITGIISIQNVTQLRSRYELKVRVSD-GRF 1960

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +S  +V++SV     ++   F + +Y   + E +S   T+A I
Sbjct: 1961 ASVAVVKISVQENKESKLK-FTRESYKAYIRENSSEKKTLAVI 2002



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + VN++D NDNAP     P      ++      ++++ A D D G NAE+   +YH+ 
Sbjct: 1547 VRVIVNVDDTNDNAPWFIGTPYSGRVFESAAVGTAVLQVTALDKDKGSNAEV---VYHIE 1603

Query: 95   NTGL-HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNT 150
            +  + + F IDP  G I    +L    +  + +TV+A+D G    S T     +V   + 
Sbjct: 1604 SGNVANSFAIDPVLGTITVAKELDRNSKTTFELTVKASDNGVPPLSNTTTVHVLVTVSDN 1663

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F    +   VSE A   S V ++T
Sbjct: 1664 AVPRFTGEAFSAEVSESALPGSFVTSVT 1691



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 19/168 (11%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F+  VI  +K+  A  +     V++ D+N+NAP        +    E       +V ++
Sbjct: 432 QFQLDVITSDKKAAAKVI-----VDVIDVNNNAPEFQQTS-YKASVDENVPIGTSVVTVK 485

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDT 131
           ATD D G N  +TYSI +VS      F ID  SGVI T+  L   +    Y++ V+A+D 
Sbjct: 486 ATDLDKGENGYVTYSITNVSP---QPFVIDYFSGVISTSEVLDYELMPRIYNLKVRASDW 542

Query: 132 GGKSSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           G    +  VE SV+      N   P+F+    +V V     +   + T
Sbjct: 543 GSPYRRE-VEASVIITLNNLNDNKPLFENVDCEVTVPRDHGVGEQITT 589



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
           R  + K+ ATD D+G N E  YS    ++     F + P SGV+  TGKL   E   Y +
Sbjct: 164 RTSVAKVTATDADIGTNGEYYYSFREWTDM----FAVHPTSGVVTLTGKLDYSETKLYEL 219

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 220 EILAVDRGMK 229



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 8/103 (7%)

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEV 142
           ++ Y+  H S+   ++F I+P +G+I T G + A    Q+ + V  +D    +++ IV+V
Sbjct: 396 QLKYAFRHKSDK--NRFTINPDTGLISTAGPINADISSQFQLDVITSDKKA-AAKVIVDV 452

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             V   N  +P FQQ +Y  +V E   I ++V T+  + L  G
Sbjct: 453 IDV---NNNAPEFQQTSYKASVDENVPIGTSVVTVKATDLDKG 492



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 10/139 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ + + D+NDN P     P   + ++   +  Q+++++A D D G N  I YS+    
Sbjct: 2794 VNVNIQVKDVNDNTPVFEANPYEAVVVENLPSGTQVIQVKAIDQDSGTNGRIIYSLDPKQ 2853

Query: 95   NTGL--HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS---SQTIVEVSVVPG 147
            N+      F ++  +G + T  +L     ++Y I++ ATD G K    + T VEV+ V  
Sbjct: 2854 NSPEIPELFAVNSETGWVTTLKELDREKTDKYKISILATDQGEKVQLITGTTVEVT-VGD 2912

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N   P F    Y   VSE
Sbjct: 2913 VNDNPPRFTAEIYKGTVSE 2931



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 26/141 (18%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVN 83
            P+SL+      V++ D+N+N  R PM     ++ G  +        ++ + A D D G +
Sbjct: 1008 PISLSSTCFIEVDVVDVNENLYR-PMFRSF-VEKGFIKEDAVIGTSVMTVTAEDEDRGRD 1065

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIV 140
             EI YSI     +GL  F ID  +G+I T  +L+  E    Y +TV A D G       V
Sbjct: 1066 GEIRYSIR--DGSGLGVFSIDEETGIIRTQ-ELLDRETTSHYWLTVYAMDRGVVPLSAFV 1122

Query: 141  EVSVV------PGPNTRSPVF 155
            EV +         P T  PV+
Sbjct: 1123 EVYIEVQDVNDNAPQTSEPVY 1143



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           ++ + +N   P+     P  I+  E      +IV + ATD+D G N ++ Y I       
Sbjct: 703 MDFHSVNRYTPQFSESFPSVIEVKEDLPVGARIVHLNATDSDSGFNGKLVYVI--SGGDA 760

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
              F +D  +G +     L     + Y++ +   D G   KSS  +++V ++   N  SP
Sbjct: 761 ESHFIVDMETGWLLVYSPLDRETADHYTLNITVYDLGIPQKSSSRLLDVKILDA-NDNSP 819

Query: 154 VFQQNTYDVNVSEGASINSTV 174
            F Q +Y V ++E   + + +
Sbjct: 820 QFLQESYSVEITESTPVGTEI 840



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 101  FRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            F I+P SGV+ T   L    IA  +Y + +Q T+  G +S T + + +    N  +PVF 
Sbjct: 1711 FDINPNSGVVVTQKALDYETIA--EYKLIIQGTNMAGLASNTTLTIHL-KDENDNAPVFD 1767

Query: 157  QNTYDVNVSEGASINSTVAT 176
            Q  +   +SE A INS V T
Sbjct: 1768 QREFQGVISESALINSVVLT 1787



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ +NL D+NDN P     +   +  +  E  + ++ + A D D      + YSI  V+ 
Sbjct: 3322 TVNINLTDVNDNRPVFSQDVYTAVISEDAELGKTVMAVMAEDFDGPAYNHVRYSI--VAG 3379

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F IDP  G ++   +L       Y++TV A+D G    SS  ++ + +    N  
Sbjct: 3380 NQGSPFTIDPVRGELKVARQLDRERTSGYTLTVVASDNGAPPLSSSAMINIDI-SDINDN 3438

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P+F Q  Y + + E     ++V  +TV+
Sbjct: 3439 PPLFSQANYSLIIQENRPAGTSVLQLTVT 3467



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 10/178 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            ++ + + LD +     K R +V+  +    A S  + +T+++ D+NDNAP          
Sbjct: 2342 IISTAQVLDHEEIQQHKLRVRVV--DGGVPALSSDIIVTIDVTDLNDNAPVFTEHTYRTT 2399

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I     R   V +++A+D D     ++ +SI  +S      F I+ R+G I  +      
Sbjct: 2400 ISELAPRGHFVSQVQASDPDSSDTNKLQFSI--ISGNEDQNFAINKRTGDITISNHRRPH 2457

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             Q  Y++ V  +D G   S  +V V V+ G N  SP F Q  Y   + E + + + VA
Sbjct: 2458 MQPLYNLNVSVSD-GVFRSSALVTVKVI-GANFHSPTFSQVDYLAELVENSPVGTLVA 2513



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPV 154
              +F ID  +GVI     L       Y + V+ATD+  G  S+  V++ ++   N  +PV
Sbjct: 2225 FKQFSIDFNTGVIHVIQPLDFETHPAYKLNVRATDSLTGAHSEVFVDI-ILEDVNDNAPV 2283

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F   TY  N+SE + I ++V  +
Sbjct: 2284 FLSKTYYANISEASVIGTSVLQV 2306



 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQY 122
            A  ++++I A D D     ++T+++   ++   L KFR+DP +G + TT +L      ++
Sbjct: 1472 AGTEVLQISAVDRD--EKNKLTFTLLSSTDPFSLRKFRLDPGTGTLYTTERLDHETMHRH 1529

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      + +V V V V   N  +P F    Y   V E A++ + V  +T
Sbjct: 1530 ILTVMVRDQDIPVKRNLVRVIVNVDDTNDNAPWFIGTPYSGRVFESAAVGTAVLQVT 1586



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 22/155 (14%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
           LTV +   N++AP   +I  + +   +A       IV +E  D D G N EI  S+  V+
Sbjct: 242 LTVRVEQANEHAP---VITAVTLAPSDADHDPTYAIVTVE--DKDQGPNGEIA-SLSIVA 295

Query: 95  NTGLHKF---RIDP--RSGVIETTGKLIAGEQ---YSITVQATDTGGK---SSQTIVEVS 143
              L +F   R  P  R   I+    +    Q   Y++T+QA D G     SS  +V V+
Sbjct: 296 GDPLQQFKAVRTSPGSREYKIKAVKDVDWDSQPFGYNLTLQAKDKGSPPQFSSAKLVHVT 355

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             P       VF++  Y VN+SE A +++ V  +T
Sbjct: 356 S-PQFKVGPAVFEKAVYRVNLSEFAPLHTPVTMVT 389


>gi|326671264|ref|XP_003199405.1| PREDICTED: protocadherin Fat 3-like, partial [Danio rerio]
          Length = 3394

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LTVN+ D+NDN+P   +     +  +      +++++ A+DNDLGVN EI+Y++  ++NT
Sbjct: 814 LTVNIEDVNDNSPEFSLESYTAVVTENAAIGTEVIQVTASDNDLGVNGEISYTL--LTNT 871

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
            L  F I+  +G +  +G L   +   +++ +QATD   + +Q   E ++   +   N  
Sbjct: 872 PL--FSINSETGSVYVSGHLDRESISDFTLKIQATDKAERGNQMFSETTLRVYLEDVNDC 929

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +PVF   +Y   V E   I + +A +
Sbjct: 930 APVFIPKSYSCRVLEDLPIGAVIAWL 955



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 18/142 (12%)

Query: 37   VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN+P           P  +    A   I+K+ ATD D G NAEI YS++
Sbjct: 3015 IGVEVTVMDANDNSPICNQAEYKASFPEDVAVNTA---ILKVGATDLDTGANAEIQYSLF 3071

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
             +   G+  F +D  SG ++T   L     AG  Y +  QATD GG   ++ + ++++  
Sbjct: 3072 GI---GVEDFFMDANSGELKTAALLDRERTAG--YMLIAQATDGGGLFCRSEISLTIL-D 3125

Query: 148  PNTRSPVFQQNTYDVNVSEGAS 169
             N  +P F    +  +V E A+
Sbjct: 3126 VNDNAPSFAFTRFMASVYESAA 3147



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 12/186 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQ 60
            +  +   LDR+     +   +V   +  G      V + V++ D NDN P     I  I 
Sbjct: 1203 ITTTSRKLDRE--QQAEHFLEVTVMDGGGIFRQSTVWVIVHVQDENDNTPEFKESIYRIS 1260

Query: 61   IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +   +  ++   + ++ A D D G NA++TYSI   ++ G  KF ID ++ ++ +   + 
Sbjct: 1261 LPERDRNKRGDPVYRVFAYDRDEGSNADLTYSIVDGNDDG--KFVIDAKTAMVYSKKMVT 1318

Query: 118  AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            AG    +T++A D G      +++  VE    P P+  +  F    Y+  V E A +  +
Sbjct: 1319 AGGYDILTIKAIDNGTPQKWSTARLHVEWIRKPVPSPLALRFTAAVYNFTVVENAKVYES 1378

Query: 174  VATITV 179
            V  ++V
Sbjct: 1379 VGVVSV 1384



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 8/171 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F F V A +    + +  V++TV L+D+NDN P    P+      +       +  I+A+
Sbjct: 2355 FSFIVRATDNGSPSQNCEVTVTVFLSDVNDNPPSFNQPLYEAFVSELAPRGHIVTCIQAS 2414

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            D D      + YSI  +S      F ID ++GVI  + +   G +  Y++ V  +D G  
Sbjct: 2415 DLDSSDAESLRYSI--LSGDEKMNFVIDSQTGVISLSSQRRQGMRPTYNLNVSVSD-GVF 2471

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            ++   V + V+ G N  SPVF Q  Y   V E A   S V  +  +   SG
Sbjct: 2472 TNTAQVNIRVM-GANLYSPVFSQRFYLAEVRENAPAGSRVIQVRATDEDSG 2521



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 39   LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            +T+ L D+NDN+P        ++    I  GE    + ++ A D D  +N  ITYSI  +
Sbjct: 3199 VTIELLDVNDNSPSFSEEIYNVLISEDIAIGET---VTRLFAEDLDSQINGRITYSI--L 3253

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                 ++F IDP +G+++    L       YS++VQA D+G  +  T V V++ +   N 
Sbjct: 3254 KGDRENQFWIDPVTGLLKVNKALDRETVSSYSLSVQAFDSGSPAKSTTVNVNIEIADVND 3313

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P+F        +        T+ T++VS
Sbjct: 3314 NPPLFSPANASAVIQLNKPAGRTILTLSVS 3343



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 18/150 (12%)

Query: 37   VSLTVNLNDINDNAPR---LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V++ V + D+NDNAP    LP    +Q+ A +    I ++ ATD D G+N  + Y +   
Sbjct: 2063 VTVRVEVEDVNDNAPEFVGLPYYAAVQVDA-QPGSSIFQVSATDLDKGINGAVYYEL--- 2118

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTGGKSSQTIVE--VSVVPG 147
                   F ++  +G + T  K+   +    +Y + V A D G     T+ E  V+VV  
Sbjct: 2119 -KENHPHFEVNKLTGDL-TLKKIFDADLSNVEYPLVVLARDAGYPFLFTVAELPVTVV-- 2174

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   PVF ++ Y ++V E   +++ +  I
Sbjct: 2175 -NKAMPVFDKSFYGISVREDIGVSTPILCI 2203



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQA 128
            +++ A D D G N EI YSI    NTG   F IDP SG+I    +  L     Y++TV+A
Sbjct: 1583 LQVIALDRDFGRNREIVYSI-DAGNTG-GIFGIDPLSGIISVARELDLTTVGFYTLTVRA 1640

Query: 129  TDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            TD G    SS T   +++    +  SP F Q  Y   ++E  ++ + V  +        C
Sbjct: 1641 TDGGTPPLSSTTTCRIAISLS-DFSSPKFAQQEYQAEITENVAVGTFVIIV--------C 1691

Query: 187  AI 188
            AI
Sbjct: 1692 AI 1693



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 11/172 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + ++LD +  +   +   V A ++     S  + + + + D+NDNAP    P+    
Sbjct: 1096 MIYTADSLDCEAQD--SYWLTVYATDRGVVPLSASIEVFIQVEDVNDNAPLTSEPIYHSY 1153

Query: 60   QIQAGEARRQIVKIEATDNDLGVN-AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++       +V+++A D D+  + + +TY I   +    + F ID  +G+I TT + + 
Sbjct: 1154 VMENSPKDVSVVRVQAQDPDVTASESRLTYRI--TAGNPQNFFSIDYNTGLITTTSRKLD 1211

Query: 119  GEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             EQ   + + V   D GG   Q+ V V V V   N  +P F+++ Y +++ E
Sbjct: 1212 REQQAEHFLEVTVMDGGGIFRQSTVWVIVHVQDENDNTPEFKESIYRISLPE 1263



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ ATD D   N  I+Y I          F ID  SG++  T +L+  E    +S  V
Sbjct: 2301 VIRLLATDKDSEKNNVISYEILSDGFNSTDYFHIDSTSGLL-LTARLLDYELTSSFSFIV 2359

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +ATD G  S    V V+V +   N   P F Q  Y+  VSE A     V  I  S L S 
Sbjct: 2360 RATDNGSPSQNCEVTVTVFLSDVNDNPPSFNQPLYEAFVSELAPRGHIVTCIQASDLDSS 2419

Query: 186  CA 187
             A
Sbjct: 2420 DA 2421



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 10/137 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VS 94
            + + ++D NDN P        ++   E   A  +++++ A D D    A+++YSI+  V 
Sbjct: 1443 IYIKVSDSNDNTPIFSE-HTYEVLVSEDTPADTEVLRVRARDRD--ERAKLSYSIHSSVD 1499

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
               +  FRI+P +GV+ T  +L   A  Q+ +T+   D      + +  + V +   N +
Sbjct: 1500 PASMRMFRINPGTGVMYTADRLDYEARTQHILTIMVKDQEFPYYRDLARIIVTLEDANNQ 1559

Query: 152  SPVFQQNTYDVNVSEGA 168
             P+F Q  YD  V E A
Sbjct: 1560 PPIFTQTNYDSTVFESA 1576



 Score = 42.4 bits (98), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 8/124 (6%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQ 121
            A  +++++ ATD D G+  +I YS   +++ G  +F I    G+I T  KL         
Sbjct: 2506 AGSRVIQVRATDEDSGIFGQIMYSF--INDLGKSQFNIGA-DGLITTAQKLDRENPINRD 2562

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
              +TV A D GG++S   V V ++   N  +P F+   Y V++     + S V  I    
Sbjct: 2563 IVLTVMALDGGGRASFCTVRV-ILADENDNAPRFRAMEYRVSIKANVPMGSLVTQIQAQD 2621

Query: 182  LASG 185
              SG
Sbjct: 2622 PDSG 2625



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 11/138 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAG--EARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            L V + D+N+N    P      ++    E  R    ++++ A D+D G +  I YSI   
Sbjct: 1024 LEVEIIDVNENLNE-PYFSEFAVRGSVKENSRHGTSVLQVTAQDDDKGRDGVIRYSIN-- 1080

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            + +GL +F ID  +G+I T   L   A + Y +TV ATD G       +EV + V   N 
Sbjct: 1081 ARSGLGRFSIDEETGMIYTADSLDCEAQDSYWLTVYATDRGVVPLSASIEVFIQVEDVND 1140

Query: 151  RSPVFQQNTYDVNVSEGA 168
             +P+  +  Y   V E +
Sbjct: 1141 NAPLTSEPIYHSYVMENS 1158



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             +F+I+  +GVI TT K    E    Y + +QA +  G +S   V + VV   N   PVF
Sbjct: 1709 RRFKINRYTGVI-TTQKDFDFEMTSSYILVIQAVNMAGIASSVTVCIQVV-DENDNPPVF 1766

Query: 156  QQNTYDVNVSEGASINSTVAT 176
            Q  TY   +SE A +NS V T
Sbjct: 1767 QDLTYTGTISEAAHVNSVVMT 1787



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDN 78
           + +  R   G      V++ V + D+ND  P   P    I I ++      + ++ ATD 
Sbjct: 125 YTLTVRATAGGGLEASVTVNVQIMDMNDLRPLFSPTSYAINIPESTPLGSNVAQVTATDA 184

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           D+G N E     Y+     + +F + P SGV+  T K  A ++  + + V A D G K
Sbjct: 185 DIGSNGE----FYYFFREEVEEFAVHPTSGVVSLTAKPNADKKSRFDLEVLAVDRGMK 238



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
            +LDR+  +    + Q   + ++G       +L V L D+ND AP    IP       ++ 
Sbjct: 888  HLDRESISDFTLKIQATDKAERGNQMFSETTLRVYLEDVNDCAPVF--IPKSYSCRVLED 945

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  I  ++  D D+G    + YS+ +  N     F+I+  SG I+    L   +Q  
Sbjct: 946  LPIGAVIAWLQTQDPDIGSGGWVRYSLPNDFN---GTFKINSESGAIKVAKDLDYEKQQF 1002

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y++++ A D G      S++ +EV ++    N   P F +     +V E +   ++V  +
Sbjct: 1003 YNLSLVAEDLGFPVKLRSESYLEVEIIDVNENLNEPYFSEFAVRGSVKENSRHGTSVLQV 1062

Query: 178  T 178
            T
Sbjct: 1063 T 1063


>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
 gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
          Length = 3038

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     ++ E    +    A D D G 
Sbjct: 903  QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 962

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
            + ++TYS+   S  GL  F ID RSG +  +  L   + +++++ V ATD G  S  T +
Sbjct: 963  SGQVTYSLVKDSGKGL--FAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNL 1020

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + V V   N   PVF++  Y VNVSE  SIN+ +  +  S L +G
Sbjct: 1021 TILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTG 1066



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 22/181 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +A+VPV   +N+ DINDN P   R P 
Sbjct: 2024 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPVFERYPY 2079

Query: 56   IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            I   P  IQ G+    ++K++A D DLG NAEI YS+   ++    KFRI+P +G +  +
Sbjct: 2080 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 2136

Query: 114  GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF--QQNTYDVNVSEG 167
              L   +G+   + V A D G   +SS  ++E+ +   P   +PV   Q  TY V + E 
Sbjct: 2137 QSLASESGKLLHLEVVARDKGTPPQSSLGLIELLIGEAPQG-TPVLRIQNETYRVMLKEN 2195

Query: 168  A 168
            +
Sbjct: 2196 S 2196



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN+P     +   
Sbjct: 454 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNSPEFEQDLYHA 511

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ +TYS+     T    F+IDP++G+I T   +  
Sbjct: 512 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 571

Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +    +TV A D G    S T   +  +   N   P+F Q+ Y+V+V+E   +   + 
Sbjct: 572 ETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 631

Query: 176 TITVSRLASGCAIM 189
            ++ S    G   M
Sbjct: 632 KVSASDPDCGVNAM 645



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 16/166 (9%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
            +S   LDR+     ++  Q+ A ++ Q  +     ++T+ + D NDNAPR  +      +
Sbjct: 1921 LSARPLDRE--QNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1978

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q  A      +V+I A D DLGVNA + YS+   +N    +F ID +SG+I T GKL   
Sbjct: 1979 QEDAPLGT-SVVQISAVDADLGVNARLVYSL---ANETQWQFAIDSQSGLITTVGKLDRE 2034

Query: 120  EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             Q  Y+  V ATD G    +S+   V+++V+   + R PVF++  Y
Sbjct: 2035 LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNR-PVFERYPY 2079



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 21/185 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
            R  +I     G   S+  +LT  V++ D+NDN P         +   E+R    QI+++ 
Sbjct: 1001 RHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-EEYSVNVSESRSINAQIIQVN 1059

Query: 75   ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A+D D G NA ITY I              S+   H F I P SG I     L   A ++
Sbjct: 1060 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDREARDR 1118

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +TV ATD G  ++     V V V   N   P FQ++ Y+  + E     S V  +T S
Sbjct: 1119 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1178

Query: 181  RLASG 185
             L  G
Sbjct: 1179 DLDLG 1183



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 18/198 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S  V + ++++D+NDNAP +  P    + 
Sbjct: 1208 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1265

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D G NA ITYSI    ++  H  F IDP SGVI T   L  
Sbjct: 1266 VREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDH 1325

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V A+D G    +T+  + V V   N   P F  ++         S+ S+ A
Sbjct: 1326 EERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFR----CSLPSSFA 1381

Query: 176  TITVSRLAS-----GCAI 188
              T   L S     GC +
Sbjct: 1382 LFTTVHLGSQLRTRGCRL 1399



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  V+AR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 578 QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 637

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y+I       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 638 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 696

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +  ++++ +    + R PVF    Y V++ E
Sbjct: 697 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRE 726



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + +  A+D D G   ++ YSI  V   
Sbjct: 2865 FRLELHDENDNEPKFPLSEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPVPSD 2924

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+D  SG++ T+  +   EQ   Y + + A+D GGK +   V V  +   +  
Sbjct: 2925 ESSWKMFRVDSESGLV-TSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVE-IESRDEF 2982

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2983 TPQFTERTY 2991



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + + D+NDN+P         +   E      I  + A+D D G NA++ YSI    N
Sbjct: 1849 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1907

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
             G +KF ID RSG  E + + +  EQ   Y++ +QA+D G  KS Q    +++ V   N 
Sbjct: 1908 LG-NKFSIDSRSG--ELSARPLDREQNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1964

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F+ + Y  +V E A + ++V  I+
Sbjct: 1965 NAPRFKLSKYTGSVQEDAPLGTSVVQIS 1992



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  V+A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1111 LDREARD--RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1168

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+  ++++    F++ P +G I T   L     E Y +
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1224

Query: 125  TVQATDTG 132
             V+A D G
Sbjct: 1225 VVEARDQG 1232



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 31/213 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQI 61
            VV K  LD +     ++   VIA +    A +V   LTV +ND NDNAP  L   PP   
Sbjct: 2504 VVLKRRLDYELQQ--EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYF 2558

Query: 62   QAGEARRQIVKIEATDNDL-----------GVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                A  +I +  + D DL           G N+++ Y I          F + P +GV+
Sbjct: 2559 AILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYII----EPAQEGFTVHPSNGVV 2614

Query: 111  ETTGKLI------AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
                  +      +G+ Y + + A D G     S T++ V      + RS  F QN Y  
Sbjct: 2615 SVNMSSLQPAVSPSGD-YFVRIIAKDAGKPVLKSSTLLRVQASDNGSGRSQ-FLQNQYRA 2672

Query: 163  NVSEGASINSTVATITVSRLASGCAIMNKEENS 195
             +SE A + S V  +    L    AI+   E S
Sbjct: 2673 QISESAPLGSVVLQLGQDVLDQSLAIVAGNEES 2705



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 270 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 326

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 327 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 386

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 387 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 421



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 31/169 (18%)

Query: 38   SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            S+TV L   D NDNAP+             +      + GE    IV   A D D G N 
Sbjct: 1602 SVTVRLQVLDANDNAPQFVSPNSSGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1658

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTG----G 133
             +TY I      G  +FRI+ ++G+IE        T  +  G ++++ + A D G     
Sbjct: 1659 RLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIITAKDHGQPEPK 1716

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            KSS ++    VV G +   P F Q  Y   + E     S V  +T   L
Sbjct: 1717 KSSLSL--HLVVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1763



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 16/141 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPI 59
            LVV++  LDR+  +  +FR ++ A +   T    S  +++ + + D+NDNAP  P   PI
Sbjct: 1454 LVVARL-LDREVQS--EFRLEIRALDTTATNNPQSSAITVKIEVADVNDNAPEWPQ-DPI 1509

Query: 60   QIQAGEAR---RQIVKIEATDNDLGVNAEITYSI---YHVSNTGLHK--FRIDPRSGVIE 111
             +Q  EA      I    ATD D G N ++ Y +   +   N    +  F +D  +G + 
Sbjct: 1510 DLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMDSLTGALS 1569

Query: 112  TTGKLI--AGEQYSITVQATD 130
                L   A ++Y + VQA D
Sbjct: 1570 LQAPLDFEAVQEYLLIVQALD 1590



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 25/184 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V+A ++ G + +  + +   L D+NDN P          L   P    QA      
Sbjct: 683 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKAPSQASST--P 738

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
           IV + ATD D G   +++Y I   +  G+  FRID  +G I      +   +    + + 
Sbjct: 739 IVAVVATDPDYGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 796

Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + ATD G   S    +V +S++     R P+F++  Y+  V E     + V ++     A
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA---A 852

Query: 184 SGCA 187
           SG A
Sbjct: 853 SGDA 856



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 11/170 (6%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P + R  ++AR       +    L + L D NDN+P+      +  +  G  +   V ++
Sbjct: 2302 PNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQV 2361

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
             A D+D G NA + Y I  V     + F I+P  SG++ T   L     + Y + + A+D
Sbjct: 2362 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIASD 2419

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + V +V   N   P F  N   V VSE   + + + +I+
Sbjct: 2420 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2467


>gi|62510905|sp|Q5DRF3.1|PCDAB_PANTR RecName: Full=Protocadherin alpha-11; Short=PCDH-alpha-11; Flags:
           Precursor
          Length = 949

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 9/189 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           ++ K++LDR+     +    V A +      +  V L V + D+NDN P        + +
Sbjct: 194 LILKKSLDRE--KTPELNLMVTATDGGKPELTGTVRLLVQVLDVNDNDPDFDKSEYKVSL 251

Query: 62  QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
               A+  +V K+ ATD D GVN E+TYS+  +   G H F +D  +G +   G L   E
Sbjct: 252 MENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEE 311

Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y I VQATD G    +    V V ++   N  SP     +  + V E A  ++ +A 
Sbjct: 312 NKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTNDNSPEVAVTSLSLPVREDAQPSTVIAL 370

Query: 177 ITVSRLASG 185
           I+VS   SG
Sbjct: 371 ISVSDRDSG 379



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++  A +    I  I  
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     +   Y + V A D G  
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRESVWAYELVVTARDGGSP 432

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
            +FQV AR+         V+L V + D NDNAP L     +  QAG A            
Sbjct: 530 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584

Query: 68  ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
                + K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRAL 636


>gi|357614378|gb|EHJ69045.1| fat protein [Danaus plexippus]
          Length = 1382

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 18/197 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI- 59
           Y+ V K  LDR+  +   +   ++A +    + S  V + +++ D NDN+P+      I 
Sbjct: 700 YIYV-KSPLDREEKD--YYSLTIVASDHGKPSRSSQVPVVIHVLDENDNSPQFTNTTFIF 756

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
           +I+  E     V K+ ATD D+G NAE+T+S+    N     FRID R+G I+T      
Sbjct: 757 KIKENEPPDTFVGKLTATDKDIGRNAELTFSLPIAQN----DFRIDSRNGFIKTLKSFDR 812

Query: 118 ------AGEQY-SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
                 +G+ Y ++TV  +D G       V V++ V   N  SP+F +  Y V VSEGA 
Sbjct: 813 ENLSQNSGQNYITLTVTVSDNGKVKLSDSVRVTIYVTDVNDNSPIFTRTPYAVEVSEGAV 872

Query: 170 INSTVATITVSRLASGC 186
           + +++  +  S    G 
Sbjct: 873 VGASIMRVYSSDADEGL 889



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            LDR+  +   +   VIA +  Q T  S    +TV++ D NDNAP      +    ++   
Sbjct: 921  LDRESID--HYVLTVIAHDSGQTTRLSSTTIITVDVLDENDNAPVFEQSQMNVSVLETEP 978

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYS 123
              ++I++  A D DLG+N E+ YSI   S      F ID  SG +     L   +   Y 
Sbjct: 979  VNKKIIQFHANDADLGINNELQYSI--TSGNRKETFFIDSYSGELFLHKHLDYEDLTSYV 1036

Query: 124  ITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            + + ATD G  S S +I     V   N  +P+F        + EG  +++ + T+T    
Sbjct: 1037 LNITATDNGNPSLSSSITFTVTVIDANDNAPIFTNTAIVRQIREGIPMHTPIVTVTAEDP 1096

Query: 183  ASGC 186
             SG 
Sbjct: 1097 DSGW 1100



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 30/194 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +++ +E++DR       + F V++ +      + P+ + + + D+NDN+P  P  P I +
Sbjct: 57  VILDRESVDR-------YAFVVLSSQ-----PTYPIEVRLRVTDVNDNSPEFPE-PVIAV 103

Query: 62  QAGEARRQIVKI---EATDNDLGVNAEIT-YSIYHVSNTGLHKFR----IDPRSGV---- 109
              E+     K+    ATD DLG N     Y I    N G  KFR    ++P        
Sbjct: 104 AFSESAAPGTKLLLDAATDKDLGENGIANDYRIVDGDNEG--KFRLNVTVNPSGQTSYLH 161

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           +ETTGKL     + Y + + A D G       ++V+V +   N   P+F Q+ + V+++E
Sbjct: 162 LETTGKLDRETNDFYILNISARDGGSPPKYGYLQVNVSILDVNDNPPIFDQSDFSVSLNE 221

Query: 167 GASINSTVATITVS 180
                +TV  +T +
Sbjct: 222 SVPPGTTVLKVTAT 235



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 27/170 (15%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHV 93
           + + V++ D+NDN P         +   E+      ++K+ ATD+DLG N++ITY +   
Sbjct: 194 LQVNVSILDVNDNPPIFDQ-SDFSVSLNESVPPGTTVLKVTATDSDLGDNSKITYEVTDT 252

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQYS---------ITVQATDTG--GKSSQTIVEV 142
                 +F +DP SGVI T  KL   +  S         +TV A D G   + ++T V V
Sbjct: 253 E----KQFAVDPESGVITTLKKLSCPKYCSNTTCNMTCVLTVIAKDHGVPRQDARTYVTV 308

Query: 143 SVVPGPNTRSPVFQQNTY------DVNVSEGASINSTVATITVSRLASGC 186
           +++   N   PV    TY         V E A   S VA ITV+ L +G 
Sbjct: 309 NLIDA-NDHDPVITF-TYVPSTANFATVDENAKNGSLVAAITVTDLDAGL 356



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
           +  QVIA+++     S   ++ + + D+NDN P          I+       R +++++A
Sbjct: 611 YEIQVIAKDQGYRPQSSTATVFLRVIDVNDNDPIFYPQRYFESIREDLAPGSR-VLQVKA 669

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG- 132
            D D G N+++   +Y + + G   F ++P +G I     L   E+  YS+T+ A+D G 
Sbjct: 670 FDLDEGDNSKV---VYKLESGGEGYFDVEPENGYIYVKSPLDREEKDYYSLTIVASDHGK 726

Query: 133 -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +SSQ  V + V+   N  SP F   T+   + E    ++ V  +T +
Sbjct: 727 PSRSSQVPVVIHVL-DENDNSPQFTNTTFIFKIKENEPPDTFVGKLTAT 774



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 20/179 (11%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQA-----GEARRQIVKIEA 75
           VIA++           +TVNL D ND+ P +    +P     A      +    +  I  
Sbjct: 290 VIAKDHGVPRQDARTYVTVNLIDANDHDPVITFTYVPSTANFATVDENAKNGSLVAAITV 349

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV--IETTGKLIAGE--QYSITVQATDT 131
           TD D G+N  IT SI  V+   L+ FR++  S V  +   G L   E  +Y++TV ATD 
Sbjct: 350 TDLDAGLNG-IT-SIKIVAGNELNHFRLENSSSVYIVHVNGILDREEISKYNLTVVATDK 407

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           G      +S  ++ V+ V   N   PVF+++ Y   +SE A I + VA IT +   +G 
Sbjct: 408 GTPPRTATSFLVIHVNDV---NDHEPVFEKSEYSTVLSELAPIGTYVAGITATDEDTGV 463



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP 58
           Y+V     LDR+     K+   V+A +K     +    L +++ND+ND+ P         
Sbjct: 382 YIVHVNGILDRE--EISKYNLTVVATDKGTPPRTATSFLVIHVNDVNDHEPVFEKSEYST 439

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
           +  +       +  I ATD D GVNAEI Y  Y  +      F ID  +G++ T   L  
Sbjct: 440 VLSELAPIGTYVAGITATDEDTGVNAEIFYDFYDGNQQ--QWFFIDHYTGLVTTRSVLDR 497

Query: 117 -IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQ 157
            I G    + V A D G   K + T ++++++   N  +P F Q
Sbjct: 498 EIQG-TVELNVSARDGGPNPKWAYTRLKITIL-DENDEAPSFPQ 539



 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 16/194 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV ++  LDR+    G     V AR+           L + + D ND AP  P +   QI
Sbjct: 488 LVTTRSVLDREIQ--GTVELNVSARDGGPNPKWAYTRLKITILDENDEAPSFPQL---QI 542

Query: 62  QAG-----EARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGK 115
                   +  ++I+ + A+D D G N  ++Y +  ++     + F +DP +G +    +
Sbjct: 543 NTSLPENVKPLKEILILTASDYDQGTNGSVSYYLSSNIERKYPNTFMLDPITGQLSAVTE 602

Query: 116 LIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
           L       Y I V A D G +  SS   V + V+   N   P+F    Y  ++ E  +  
Sbjct: 603 LDRERIPLYEIQVIAKDQGYRPQSSTATVFLRVI-DVNDNDPIFYPQRYFESIREDLAPG 661

Query: 172 STVATITVSRLASG 185
           S V  +    L  G
Sbjct: 662 SRVLQVKAFDLDEG 675



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 15/172 (8%)

Query: 19   FRFQVIAREKQGTAASVPVS---LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------ 69
            FR  V+A +K   A+S   S   +TV + DINDNAP    +    I +    R       
Sbjct: 1143 FRITVVACDKAEPASSRLCSEKLVTVIVEDINDNAPVFVSMNAAVINSERLGRSMSRGKF 1202

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQA 128
            I+ + A D D G N  +TY + H  N     F +   +G +       +   ++++ ++A
Sbjct: 1203 IMNVLARDLDSGTNGLVTYKLIHGGN---DMFDLHRSNGALSLRYPPSMPDVRWNLVIKA 1259

Query: 129  TDTGGKSSQTIVE--VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            TD    S Q   E  ++V+ G      +   N   ++V+E     + V  +T
Sbjct: 1260 TDEAVLSEQRSTETYLTVIMGGTELEGIMWTNVGSISVAENEPAGTAVLNMT 1311


>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
          Length = 4981

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+        + I 
Sbjct: 2945 NINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIK 3004

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             I   D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV A 
Sbjct: 3005 VIAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFCITVTAK 3062

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    SSQ  VE++V    N  +P F QN     + E  S+ S V T++
Sbjct: 3063 DKGNPPLSSQATVEITVTE-ENYHTPEFSQNHMSATIPESHSVGSIVRTVS 3112



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  PR        +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S T + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMTRINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTAIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDITSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVDVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINGKNGTISLLGPLDVQAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNVQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFGQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQA D G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPVFKEDPFVSEILENLSPRKILTVSAV 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFNINHATGEIRSVRPLDREKVSYYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TI+ S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTISGSSL 2594



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G N  I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNXXIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSSAA 390



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +   + + +K   + S  V + +N+ D NDNAPR   I    + +       + ++  +D
Sbjct: 2739 YVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLGYTVTRVTTSD 2798

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKS 135
             D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I V A D+G   
Sbjct: 2799 EDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSGWTV 2854

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 2855 STDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQV 2894



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSNTGLHKFRIDPRSGVIETTG 114
             R    + K+ A D D G N E+ YS         ++ +S    + ++ D R  ++   G
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFD-RESLMRRRG 1171

Query: 115  KLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  
Sbjct: 1172 TAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANL 1226

Query: 172  STVATITVSRLASG 185
            + V  ++ S +  G
Sbjct: 1227 TQVLRVSASDVDEG 1240



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ + A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKILAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   P F Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENA 596



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|354475386|ref|XP_003499910.1| PREDICTED: protocadherin Fat 3-like [Cricetulus griseus]
          Length = 4555

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 8/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2551 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2608

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 2609 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2668

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                 S  V+A D G     +++ V + V  P T  P F Q+ Y   ++E  +I STV T
Sbjct: 2669 KNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTIAEDTAIGSTVDT 2728

Query: 177  ITV 179
            + +
Sbjct: 2729 LRI 2731



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1516 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEAS 1573

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  + 
Sbjct: 1574 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMT 1631

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ATD G    S+  IV VS+    N+  P F    Y   V+E   I ++V 
Sbjct: 1632 AMGQFVLSVKATDQGSPPMSATAIVRVSISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690

Query: 176  TIT 178
             I+
Sbjct: 1691 LIS 1693



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 24/149 (16%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V ++D+NDN+P          LP   P       + + I+K+ A D D+G N +I YS+Y
Sbjct: 3016 VTVSDVNDNSPICDQVAYSASLPEDIP-------SNKIILKVSAKDADIGSNGDIRYSLY 3068

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGP 148
               NT   +F +DP SG ++T   L+  E+   Y++  +ATD GG+     V + ++   
Sbjct: 3069 GSGNT---EFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCHANV-LLLLEDV 3123

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   PVF  N Y   V E  +  + +  +
Sbjct: 3124 NDNPPVFSSNHYTACVYENTATKALLTRV 3152



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LTVN+ D NDN P       +Q       +++     +I+++EA D DLG N E+ YS+ 
Sbjct: 816 LTVNVEDANDNNPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVMYSVL 870

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T  H+F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 871 ----TDTHQFTINSSTGIVSVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 926

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F   +Y V V E   + + +A +
Sbjct: 927 DVNDCSPAFIPTSYSVKVLEDLPVGTVIAWL 957



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1098 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1155

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D G N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1156 VMENSPKDVSVIQIQAEDPDSGSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1213

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1214 EQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1264



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+    +F +  Y+  V E   +   V  ++V
Sbjct: 1354 PSPIPLMFDEPFYNFTVMESDKVTEIVGVVSV 1385



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ D+NDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    +     
Sbjct: 2072 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----ILQDDY 2126

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++   Y +T+ A D G  S    VE+ +    N   PVF
Sbjct: 2127 GHFEINPNSGNVILKEAFNSDLSNIDYGVTILAKDGGNPSLSKSVELPITI-VNKAMPVF 2185

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y   ++E  ++N+ + +I
Sbjct: 2186 DKPFYTATINEDVTMNTPILSI 2207



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 17   GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
              F F V  R+    Q TA S PV + + + D+NDN P     +   + +       +++
Sbjct: 1844 AHFHFHVHVRDSGSPQLTAES-PVEVNIEVIDVNDNPPVFTQAVFETVLLLPTYVGVEVL 1902

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            K+ ATD D  V  E+TYS+      G+  F +DP SGV+      ++ + Y + V+ +D 
Sbjct: 1903 KVSATDPDSEVPPELTYSLME---GGVDHFLMDPNSGVLTIKDNNLSKDHYMLIVKVSD- 1958

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1959 -GKFYSTAMVTIMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 2003



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 3098 YNLIARATDGGGRFCHANVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   + S
Sbjct: 3158 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIILERPLDREQQSSYNISVRATDQSPRQS 3214

Query: 137  -QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 3215 LSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3257



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 38   SLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            S+T+ + DINDN P       L  +P    +      Q++ + AT  D+G NAEITY I 
Sbjct: 3220 SVTITVLDINDNPPVFERRDYLVTVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIR 3275

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +  G  KFRI+P++G I     L     +++ + V+A D G  +      +S+ +   
Sbjct: 3276 SGNEQG--KFRINPKTGGISVLEALDYETCKRFYLVVEAKDGGTPALSAAATISIDLTNV 3333

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N   P F Q+ Y   +SE A
Sbjct: 3334 NDNPPQFSQDVYSAVISEDA 3353



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  +    + K
Sbjct: 1451 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDTMSMRK 1507

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FR+DP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1508 FRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTS 1567

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1568 PLYEASVFESAALGSVVLQVT 1588



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 31/180 (17%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYETIIMEGMPVG 2829

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
             ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 2830 TKLAQVRAIDMDWGANGQVTYSLH--SDSHLEKVMEAFDIDSNTGWISTLKDLDHETDPA 2887

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +S +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 2888 FSFSVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 13/170 (7%)

Query: 20   RFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--QIVKIEA 75
            RF ++   K G   A S   +++++L ++NDN P+        + + +A     ++ + A
Sbjct: 3305 RFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVYSAVISEDALEGDSVILLIA 3364

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V     ++F +DP  G+++   KL    ++G  YS+ +QA D+
Sbjct: 3365 EDVDSKPNGQIRFSI--VGGDRDNEFAVDPILGLVKVKKKLDRERVSG--YSLLIQAVDS 3420

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  S  +   V++ +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3421 GIPSMSSTTTVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 3470



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT + +  EQ   Y + +QAT+  G +S   V + +V
Sbjct: 1701 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEQTSAYQLIIQATNMAGMASNATVSIQIV 1759

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N   PVF  + Y  ++SE A INS V+++  S L
Sbjct: 1760 -DENDNPPVFLSSQYSGSLSEAAPINSIVSSLDNSPL 1795



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L + L+D+ND +P  +P    
Sbjct: 884  IVSVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPTSYS 941

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 942  VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLINDYNG---RFEIDKASGAIRLSKELD 998

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 999  YEKQQFYNLTVRAKDKG 1015



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVITAADILDRETTGS------ 1112

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1113 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1152



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
           +V   E       V   +T+ + D ND+ P     +      ++      ++ + A+D D
Sbjct: 440 EVYKLEVTNKEGDVKAQVTIGIEDANDHTPEFQQTVYETFVNESIPVGTNVLTVSASDKD 499

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
            G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G    
Sbjct: 500 KGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPYR 556

Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
            ++ V V++  G  N  SP+F++
Sbjct: 557 HESEVNVTIRVGNINDNSPLFEK 579



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           +I    +G        + + + D+ND  P   P    + I ++   R  + ++ ATD D+
Sbjct: 127 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 186

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E     Y+     +  F + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 187 GSNGE----FYYYFKNKVELFSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 238



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ +TD D G N  + Y I   +      F ID  SG+I  T +++  E     ++ V
Sbjct: 2305 VLQLVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKV 2363

Query: 127  QATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             ATD G    SS+ +V +  +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2364 TATDNGFPSMSSEVLVHI-YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 2361 LKVTATDNGFPSMSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  ++
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTN 2477

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2514



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I+KI+A D D G N ++ ++I   +      F ID  +G ++    +    +  Y + + 
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSC--FNIDMETGQLKVLMPMDREHRDLYLLNIT 801

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +PVF Q++Y V++ E +SI + +  +
Sbjct: 802 IYDLGKPQKSSWRLLTVNV-EDANDNNPVFLQDSYSVSILESSSIGTEIIQV 852



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +I+YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 2513 KVIHVPATDGDPGTYGQISYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2568

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2569 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2608



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 419 FKINPRSGLIVTAQPLNIVKKEVYKLEVTNKEGDVKAQVTI----GIEDANDHTPEFQQT 474

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+  V+E   + + V T++ S    G
Sbjct: 475 VYETFVNESIPVGTNVLTVSASDKDKG 501


>gi|226069402|dbj|BAH36925.1| dachsous [Gryllus bimaculatus]
          Length = 359

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 15/151 (9%)

Query: 41  VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +N+ D+ND+AP     P     P   Q G     +V++EA D D G NAE+ YS   V+ 
Sbjct: 2   INVRDVNDHAPVFTQYPFTADVPAYTQPGH---NLVRVEAQDADQGTNAEVVYSF--VNQ 56

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
              +KFRI+P +G++  +  L   AG+ + + V A D G   +S+  +VEV V       
Sbjct: 57  PPGNKFRINPNTGIVTASASLAAEAGKLFHLEVLARDKGNPPRSASGLVEVRVGDAAEGA 116

Query: 152 SPV-FQQNTYDVNVSEGASINSTVATITVSR 181
           + + FQ  +Y V+++E A +   V  +   R
Sbjct: 117 ARLRFQNASYAVSLAENAPVGREVVQVAAVR 147



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V+L D NDNAPR   P       +       ++++ ATD D   NA + Y I  V   
Sbjct: 239 LVVHLQDQNDNAPRFTQPQYTATVWEGNNKGTFVIQVSATDADQDANARVLYHI--VDGN 296

Query: 97  GLHKFRID-PRSGVIETTGKL--IAGEQYSITVQATDTG 132
             + F I+ P SG+++T   L     + Y +TV ATD G
Sbjct: 297 HDNAFVIEPPFSGLVKTNIVLNREIRDAYRLTVIATDEG 335


>gi|410909630|ref|XP_003968293.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
          Length = 4673

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 10/182 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P+       V AR+  G  +   V +T  L D NDNAP          +
Sbjct: 2612 ITTVEKLDREDPSNRDVSLTVSARDAGGYVSYATVQMT--LLDENDNAPHFCATEYRASV 2669

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT---GKL 116
            ++  A   +V +++A+D D G NA ITYSIY  S+  +     IDP +G I T    G L
Sbjct: 2670 KSSVAEGFLVTQVQASDPDDGPNARITYSIYSDSHVPVMDILEIDPDNGWIVTKGSFGHL 2729

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            I    Y   V+A D G     ++V V V V  P    P F Q+ Y+ +V E   I + V 
Sbjct: 2730 INSVLY-FFVKAEDGGHPVRHSLVSVYVHVVSPGAFIPSFLQHHYEFSVPEDTPIGTAVG 2788

Query: 176  TI 177
            T+
Sbjct: 2789 TV 2790



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ ATD DLGVNA + YS++     G H FRIDP SG I+T+  L     + Y +  Q
Sbjct: 3117 VLRVGATDADLGVNAWVQYSLH---GPGSHDFRIDPDSGEIKTSVILDRELTDSYRLLAQ 3173

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ATD GG+  +  V + V    N   P+F Q+ +  ++ E
Sbjct: 3174 ATDGGGRWCRAEVRIKVT-DVNDNPPMFTQSQFSTSIYE 3211



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 12/180 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLP---MIP 57
            ++V +  LDR+  +   +R  V A +    T  S   +LTV + DINDN P       + 
Sbjct: 3255 ILVLERFLDREVQS--TYRVTVRATDWGAPTRLSSFANLTVTILDINDNPPVFEHRDQLV 3312

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             ++   G    +++++ A   D+G NAEITYSI   +  G  KF I PR+G I  +  L 
Sbjct: 3313 TVKEDVGLGT-EVLRVHAASKDIGTNAEITYSIRSGNEHG--KFHIQPRTGAILVSQPLD 3369

Query: 118  --AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                  Y +TV+A D G      I  V++ +   N  +PVF    Y   VSE A++  +V
Sbjct: 3370 YETCRDYFLTVEARDGGTPPLSAITTVNINITDVNDNAPVFSCQLYTAVVSEDAAMGDSV 3429



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V +TV + D NDN P  P  I  +++   E R++   I ++ A D D G N++++YSI  
Sbjct: 1300 VWVTVRVLDENDNKPIFPEKIYQVKLPERERRKKGEPIYRVFAYDRDEGPNSDLSYSI-- 1357

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNT 150
            V      KF IDP++ V+ +     AG    +T++ATD G   KSS   + +  +  P  
Sbjct: 1358 VDGNEDTKFFIDPKTAVLSSRKAFAAGSYNILTIKATDNGRPQKSSTARLHIEWIRRPLA 1417

Query: 151  RSPV-FQQNTYDVNVSEGASINSTVATITVSR 181
              P+ F Q  Y+  V E   ++  V  +++ +
Sbjct: 1418 APPLQFDQPFYNFTVMENDKVSEIVGVVSLQQ 1449



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 16/167 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            +   V AR +        V L V + D+NDNAP    LP    +Q+ A E    I ++ A
Sbjct: 2111 YELVVEARREDDHLHVARVLLKVQVEDVNDNAPVFVGLPYYAAVQVDA-EPGTDIFRVMA 2169

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
             D+D G+N  ++Y  Y + + G   F I+  +G++         ++  +Y + V A D G
Sbjct: 2170 IDHDKGINGHVSY--YLLDDHG--HFEINKLTGILSLKKAFESDLSNVEYHMVVYARDHG 2225

Query: 133  G--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SS T   ++VV   N   PVF ++ Y ++V+E  ++++ V  I
Sbjct: 2226 SVPLSSTTEFPITVV---NKAMPVFDKSFYHISVNEDVAVHTPVLGI 2269



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 41   VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+ND+ P     +      ++      +V++ A D D G NA++ YSI    N G 
Sbjct: 1615 VEVKDVNDHVPIFTRSVYEGSVYESSAVGSAVVQVTALDKDKGRNADLQYSI-EAGNKG- 1672

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPV 154
            + F I+P  G+I  +  L       Y +TV+ATD G    S+ T+V +SV    N  +P 
Sbjct: 1673 NTFHIEPTLGIITVSHDLNLSSIGHYVLTVRATDHGSPPLSTTTMVHISVTLSDNA-APK 1731

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F Q  Y   ++E  ++ +++ T++
Sbjct: 1732 FPQKEYLAIITENVAVGTSIITVS 1755



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 9/168 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--QIVKIEAT 76
            +   V AR+      S   ++ +N+ D+NDNAP         + + +A     ++++ A 
Sbjct: 3376 YFLTVEARDGGTPPLSAITTVNINITDVNDNAPVFSCQLYTAVVSEDAAMGDSVIQVVAE 3435

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-- 132
            D D   N ++ Y+I    N G ++F IDP SG+I    +L       YS+ + A DTG  
Sbjct: 3436 DVDSKPNGDVLYTII-AGNQG-NQFSIDPTSGIIRVNKELDRESVPSYSLAISACDTGIP 3493

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS T+V +  +   N  +P F  + + V + E   I +++   +++
Sbjct: 3494 PLSSTTVVNID-LSDINDNAPFFALDDFTVVIQENKPIGTSILQFSIT 3540



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 27/177 (15%)

Query: 19   FRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------- 69
            F  ++ AR+K  QG       +L V L D+ND        PP  I +    R        
Sbjct: 960  FYLKIEARDKAEQGNQRFSVTTLKVILEDVND-------CPPAFIPSAYKTRALEDLPVG 1012

Query: 70   --IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              +  +E  D DLG   ++ YS+ +  N     F +D  SG I    +L    Q  Y+++
Sbjct: 1013 TVLAWLETQDPDLGSGGQVQYSLANDYNGW---FEVDRTSGAIRLMKELDYETQQFYNLS 1069

Query: 126  VQATDTGGKSSQ---TIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A D G   S    T VE+ VV    N  +P F Q      V E A I +T+  +T
Sbjct: 1070 VKAKDRGKPVSLLSVTSVEIEVVDVNENLYAPYFSQFALKATVKENARIGTTLLQVT 1126



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 19/168 (11%)

Query: 19   FRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQ 69
            F F V  R+  +    A  P  +T+ + D ND+ P+         ++ P  +       +
Sbjct: 1908 FHFHVFVRDSGRPSLTADGPAEVTIQVIDTNDSPPQFSQTSYETVLLLPTYVGV-----E 1962

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            ++++ ATD D  V+  +TYS+   +N  L  F I P SGVI       + E++   V+ +
Sbjct: 1963 VLQVTATDPDKDVSKNLTYSL---TNGVLEHFAIKPLSGVIVVKQNNFSSERFLFGVRVS 2019

Query: 130  DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D  GK S T +   +V         F Q+ Y   + E  S  + VA +
Sbjct: 2020 D--GKFSNTALVNVLVREALDSGLSFSQSLYSSTIRENESAVTQVAVV 2065



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F +D   G I     L A +Q  Y++TVQATD G K++ T V V+V+   N  +PVF Q 
Sbjct: 1467 FHVDKTVGTIIIAKPLDAEQQPSYNLTVQATD-GTKTAHTQVHVTVLDN-NDNAPVFSQP 1524

Query: 159  TYDVNVSEGASINSTVATITVS 180
            TYDV VSE    ++ V  +  S
Sbjct: 1525 TYDVTVSEDIPPDAEVVQVVAS 1546



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 18   KFRFQVIAREKQGTAASV-PVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            ++ F+V A  +Q    SV  V + V + D+NDN P           ++      +I++++
Sbjct: 2843 EYYFKVTATIQQTKIDSVTSVDVEVKVLDLNDNKPEFVTDAYEATVMEGVPLSTKILQVQ 2902

Query: 75   ATDNDLGVNAEITYSIYHV----SNTG--LHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            A D D G+N ++ YS+  +    S++G   + F ID +SG I T   L   +   Y  TV
Sbjct: 2903 ALDADSGINGQVRYSLGDLIRSESDSGALFNTFSIDSKSGWISTLKDLDHESASSYVFTV 2962

Query: 127  QATDTG 132
             A+D G
Sbjct: 2963 VASDLG 2968



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  I ++ ATD D+G N E     Y+     +  F 
Sbjct: 213 DMNDLRPLFSPTTYSVTIMESTPLRTSIAQVTATDADIGSNGE----FYYFFKNKIDLFA 268

Query: 103 IDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           + P SGV+  +GKL   E  QY + + A D G K
Sbjct: 269 VHPTSGVVLLSGKLDVSERHQYDLEILAVDRGMK 302



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEV 142
            +TY I   +  G+  FRI+  SGV+ TT K +  E+   YS+ VQA +  G +S   + +
Sbjct: 1762 LTYDIKQGNAEGV--FRINQYSGVM-TTRKSLDYEKTPSYSLVVQAINMAGMASNATLII 1818

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
             +    N   PVFQQ  Y  ++SE A++NS V     S L       ++ EN+
Sbjct: 1819 QL-KDENDNPPVFQQLHYRGSISEAAAVNSVVLESDDSPLVIKATDADRNENA 1870



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 38   SLTVNLNDINDN--APRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHV 93
            S+ + + D+N+N  AP              AR    ++++ A D+D   + EI YSI   
Sbjct: 1086 SVEIEVVDVNENLYAPYFSQFALKATVKENARIGTTLLQVTANDDDASRDGEIQYSIR-- 1143

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
              +GL +F I+  +G+I TT  L     + Y +TV ATD G       +EV + V   N 
Sbjct: 1144 DGSGLGRFAINEETGMIYTTDILDRETKDSYWLTVYATDRGVVPQFATIEVFIQVEDVND 1203

Query: 151  RSPVFQQNTYDVNVSEGA 168
             +P+  +  Y   V E +
Sbjct: 1204 NAPLTSEAMYQCTVHENS 1221



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 10/172 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            ++ + + LDR+  +   +   V A ++        + + + + D+NDNAP L      Q 
Sbjct: 1159 MIYTTDILDRETKD--SYWLTVYATDRGVVPQFATIEVFIQVEDVNDNAP-LTSEAMYQC 1215

Query: 62   QAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               E       +++I+A D D    +    S + +S    + F I+  +G+I TT + + 
Sbjct: 1216 TVHENSPDGVSVIQIQAQDPDDTALSPDKLSYHIISGNPQNLFTINTNTGLITTTSRKLD 1275

Query: 119  GEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             EQ   +++ V  +D+G     ++V V+V V   N   P+F +  Y V + E
Sbjct: 1276 REQQAEHNLEVMVSDSGPSPKHSVVWVTVRVLDENDNKPIFPEKIYQVKLPE 1327



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 14/111 (12%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSI 124
            ++++++ATD+D G   +I YS   V++ G  KF +D   G I T  KL     +    S+
Sbjct: 2574 RVIQVKATDSDPGAFGQIVYSF--VNDLGREKFSMDAF-GQITTVEKLDREDPSNRDVSL 2630

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            TV A D GG  S   V+++++   N  +P F    Y       AS+ S+VA
Sbjct: 2631 TVSARDAGGYVSYATVQMTLL-DENDNAPHFCATEYR------ASVKSSVA 2674



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)

Query: 39  LTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
           LTV + D NDNAP+        ++ P     G     ++++ ATD D G N EI YSI  
Sbjct: 876 LTVFIEDTNDNAPQFLQEGGYMIVIPENTAIG---TDVIQVGATDRDAGPNGEIVYSIL- 931

Query: 93  VSNTGLHKFRIDPRSGVIETTGKL 116
              T    F I+  +GV+   G+L
Sbjct: 932 ---TPATNFGINSTNGVVYVAGQL 952



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---------RRQIV 71
            ++++A+   G        + + + D+NDN       PP+  Q+  +         +  + 
Sbjct: 3168 YRLLAQATDGGGRWCRAEVRIKVTDVNDN-------PPMFTQSQFSTSIYEDTVPKALLT 3220

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            ++ A D D G    +TYS+  V + G   F ID  SG++     L    Q  Y +TV+AT
Sbjct: 3221 RVPAIDPDEGPGRIVTYSL--VDDAG-RSFSIDKTSGILVLERFLDREVQSTYRVTVRAT 3277

Query: 130  DTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G     SS   + V+++   N   PVF+     V V E   + + V  +
Sbjct: 3278 DWGAPTRLSSFANLTVTIL-DINDNPPVFEHRDQLVTVKEDVGLGTEVLRV 3327


>gi|74149728|dbj|BAE43857.1| Protocadherin alpha [Macaca fuscata]
          Length = 948

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           +V  ++LDR+     +    ++A +      +  V + + + D+NDN P     +  +++
Sbjct: 194 LVXGKSLDRE--ETAEVNLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFAQSVYKVKL 251

Query: 62  QAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               A    +VK+ A+D D G N+EI YS+   V +T   KF IDP SG I T GKL   
Sbjct: 252 LENTANGTLVVKLNASDADEGSNSEIVYSLGSDVFSTIQTKFTIDPSSGEIRTMGKLDYE 311

Query: 120 E--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           E   Y I V ATD G  S     ++S+ +   N  +P     +  + +SE AS+ + +A 
Sbjct: 312 EAKSYEIQVTATDKGTPSMSGHCKISLKLVDINDNTPEVSITSLSLPISENASLGTVIAL 371

Query: 177 ITVSRLASG 185
           ITVS   SG
Sbjct: 372 ITVSDRDSG 380



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    + S  V+L V + D NDNAP L  +PP    A  A  ++V       
Sbjct: 531 LQFQVSARDGGVQSLSSNVTLQVFVLDENDNAPAL--LPPRAGTAAGAVSELVPWSVGAG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 589 YVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPVFPMTVKTIRFPESRLLNSRFPLEGASDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               I     + E+     GK +  E+ +   + + ATD G       V++ + V   N 
Sbjct: 178 FFLDIQTNDELSESLSLVXGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F Q+ Y V + E  +  + V  +  S    G
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 272


>gi|340728577|ref|XP_003402597.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
           partial [Bombus terrestris]
          Length = 931

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 16/150 (10%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D+NDNAP+    +   +I +       + +  ATD DLG NA +TYS+   +N 
Sbjct: 647 LPVTILDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADLGENARVTYSLVTETN- 705

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
               FR+DP +GV+   G+L    Q  Y + ++A D GGK        S  +V V+ V  
Sbjct: 706 ---DFRVDPVTGVLTVFGRLDRERQEIYELRIRAQDNGGKGTDSPPLYSDALVRVT-VDD 761

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F  +TY V + E   I + VA +
Sbjct: 762 VNDNAPSFALSTYTVKIREDVPIWTVVAVV 791



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 17/169 (10%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           GT  +    +T+ +  +N ++P + +  +P I  Q+      IV++   DND G++ +I 
Sbjct: 51  GTRRASTAKVTIRVRQVNLHSPEIYVHHLPDIVEQSNADIYAIVRV--VDNDEGIHGQIA 108

Query: 88  YSIYHVSNTGLHKFRIDPRSG---------VIETTGKLIAGEQYSITVQATDTG--GKSS 136
            S+  V       FR+ P  G         V+    +  A + Y++T++ATD G   + S
Sbjct: 109 -SLDIVGGDPAGHFRVRPAGGPHSGEYNIEVLHLLDRETAVQGYNLTLRATDRGVPQRYS 167

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V V +    N  +PVF +  Y+V V E A IN+ V  + V+    G
Sbjct: 168 YKFVPVHLAD-LNDNAPVFSREIYEVKVPETAPINTPVIRLKVTDADEG 215



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEATDNDLGVNAEIT 87
           GT       + +N+ D NDN P        + I   E A   +VKI A D D G NA I+
Sbjct: 269 GTRKQSSAKVKINVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKITAKDRDSGENAYIS 328

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           YSI ++       F ID  SG+++T   L       +Y + V+ +D G
Sbjct: 329 YSIDNIQKV---PFEIDHFSGIVKTKQVLDYETMKREYLLHVRVSDWG 373



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 47  NDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           N +AP     P  +I+A E+ +    +VKI A D DL  N ++ + I       +  F I
Sbjct: 550 NIHAPEFVDFPS-EIKANESVKIGTTLVKIRARDRDLDYNGKLVFCISSGDRDSV--FGI 606

Query: 104 DPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP +G +   G L      +Y + +   D G   KS+  ++ V+++   N  +P F+++ 
Sbjct: 607 DPDTGDLNVIGYLDRERESEYFLNISVYDLGKPQKSASKMLPVTILD-VNDNAPKFEKSL 665

Query: 160 YDVNVSEGA 168
               +SE A
Sbjct: 666 ASFRISETA 674


>gi|47212432|emb|CAF94182.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3085

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 28/191 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P+       V A++  G  +   V   V+L D NDNAP           
Sbjct: 2597 ITTAEKLDREDPSNQYVVVSVAAQDAGGHVSYATVQ--VSLVDENDNAPHF--------W 2646

Query: 63   AGEARRQI----------VKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGV 109
            A E R  +           +++A+D D G NA ITYSIY   HV  T +    IDP +G 
Sbjct: 2647 ATEYRASVRSSVAEGFLLTQVQASDPDAGTNARITYSIYSDSHVPVTDI--LEIDPDNGW 2704

Query: 110  IETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            I T G    +        V+A D G  +  ++V V V V  P    P F Q  Y+ +V+E
Sbjct: 2705 IVTKGAFGHLMNSVLYFFVKAEDGGHPARHSLVSVYVHVLSPAASIPSFLQQHYEFSVAE 2764

Query: 167  GASINSTVATI 177
              S+ + V  +
Sbjct: 2765 DTSVGTAVGML 2775



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 18/164 (10%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V +TV + D NDN P  P  +  +++   E R++   I ++ A D D G N++++YSI  
Sbjct: 1249 VWVTVRVLDDNDNKPIFPEKVYQVKLAERERRKKAEPIYRVFAYDGDQGPNSDLSYSIAD 1308

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---------YSITVQATDTG--GKSSQTIVE 141
             +     KF IDP++ V+ +     AG           Y  +++ATD G   KSS   + 
Sbjct: 1309 GNEDA--KFFIDPKTAVLSSRKAFAAGTYNILTVCYGFYRTSIKATDNGRPQKSSTARLH 1366

Query: 142  VSVVPGPNTRSP-VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +  V  P    P +F Q  Y+  V E   ++  V  +++ R A+
Sbjct: 1367 IEWVRRPPAGPPLLFDQPFYNFTVMESDKVSEMVGVVSLRRSAA 1410



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L+++   LD +     KF F VIA +      S  VS+TV ++DINDN P    ++    
Sbjct: 2390 LILTARMLDHELVQ--KFDFVVIATDNGFPPLSSEVSVTVMVSDINDNPPVFNQLLYEAY 2447

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +     R   V  ++A+D D     ++ YSI  +S      F +D  +G++  + +    
Sbjct: 2448 VDELAPRGHFVTCVQASDADSSDYEKLEYSI--LSGNEKLVFMLDKMTGIVTLSSRYKQR 2505

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +  YS+ +  +D G  +S   V + V  G N  +PVF+QN Y+  V E + + + V  +
Sbjct: 2506 MEPAYSLNISVSD-GVFTSTAQVHIKVSQG-NLYAPVFEQNVYEAQVKENSVVGTRVVQV 2563



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            +   V AR +        V + V + D+NDN P    LP    +Q+ A E    I ++ A
Sbjct: 2096 YELVVEARREDDHLRVARVLVKVQVEDVNDNVPVFVGLPYYAAVQVDA-EPGTAIFRVMA 2154

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
             D D G+N  ++Y  Y + + G   F I+  +G++         ++  +Y + + A D G
Sbjct: 2155 IDQDKGINGHVSY--YLLDDHG--HFEINKLTGILSLKKAFESDLSNVEYQMVIYARDHG 2210

Query: 133  G--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SS T   ++VV   N   PVF +  Y ++V+E  ++++ V  I
Sbjct: 2211 SIPLSSTTEFPITVV---NKAMPVFDKPFYSISVNEDVAVHTPVLGI 2254



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 9/144 (6%)

Query: 41   VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + + D+ND+ P            ++      +V++ A D D G NA++ YSI    N G 
Sbjct: 1600 IEVKDVNDHVPIFTRSTYEGSVCESSAVGSAVVQVSALDKDKGENADVQYSI-ESGNKG- 1657

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPV 154
            + F I+P  G+I  +  L       Y +TV+ATD G    S+ T+V +SV    N  +P 
Sbjct: 1658 NTFHIEPILGIITISHDLNLSSIGHYVLTVRATDKGSPPLSTTTMVHISVTLSDNA-APK 1716

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F Q  Y   ++E  ++ +++ T++
Sbjct: 1717 FPQEEYLAVITENVAVGTSIITVS 1740



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 19   FRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIE 74
            F F V  R+  +    A  P  +T+ + D ND+ P+        + ++   A  ++++++
Sbjct: 1893 FHFHVFVRDSGRPQLTADGPAEVTIQVMDTNDSPPQFSQSSYETVLLRPTYAGVEVLQVK 1952

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
            ATD D  V+  +TYS+   +N  L  F I+P SG I       + E++   V+ +D G  
Sbjct: 1953 ATDPDEDVSRNLTYSL---TNGVLEHFAIEPLSGTIVVKQSNFSNERFLFGVRVSD-GQF 2008

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            SS  +V V V    ++    F Q+ Y   + E  S  + VA +
Sbjct: 2009 SSTALVNVLVREALDS-GLSFSQSLYSSTIQENESGITQVAVV 2050



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D+D+G + EI YSI     +GL +F I+  +GVI TT  L     + Y +TV 
Sbjct: 1048 LLQVAAQDDDVGRDGEIQYSIR--DGSGLGRFAINEETGVIYTTDTLDRETKDSYWLTVY 1105

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            ATD G       + V V V   N  +P+  +  YD +V E
Sbjct: 1106 ATDRGVVPQFATIAVFVQVEDVNDNAPLTSEAMYDSSVQE 1145



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 14/111 (12%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QY-SI 124
            ++V+++ATD+D GV   +TYS   V++ G  +F ID  +G I T  KL   +   QY  +
Sbjct: 2559 RVVQVKATDSDPGVFGRVTYSF--VNDVGRERFSIDA-NGQITTAEKLDREDPSNQYVVV 2615

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            +V A D GG  S   V+VS+V   N  +P F    Y       AS+ S+VA
Sbjct: 2616 SVAAQDAGGHVSYATVQVSLV-DENDNAPHFWATEYR------ASVRSSVA 2659



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)

Query: 39  LTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
           LTV + D NDNAP+        ++ P     G     ++++ ATD D G N E+ YS+  
Sbjct: 802 LTVFIEDANDNAPQFLQEGGYTVVLPENTAIG---TDVIQVGATDRDAGPNGEVAYSLL- 857

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQ----TIVEVSVVP 146
              T    F I+  SGV+   G+L       + + V+A D   + SQ    T ++V V+ 
Sbjct: 858 ---TATANFGINSTSGVVYVAGQLDRELVSVFYLKVEARDKAEQGSQRFSVTTLKV-VLE 913

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   PVF  + Y     E   + + +A +
Sbjct: 914 DVNDCPPVFIPSVYKTRALEDLPVGTVLAWL 944



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           ++V + D+ND  P   P    + I ++   R  I ++ ATD D+G N E     Y+    
Sbjct: 133 VSVQVLDMNDLRPLFSPTTYSVTIMESTPLRTSIAQVTATDADIGSNGEF----YYFLKN 188

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQY--SITVQATDTGGK 134
            +  F + P SGV+  +GKL   E+Y   + + A D G K
Sbjct: 189 KMDLFAVHPTSGVVLLSGKLNVDERYQHDLEILAVDRGMK 228



 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEV 142
            +TY I      G+  F+I+  SGVI TT K +  E+   YS+ VQA +  G +S     +
Sbjct: 1747 LTYDIKQGDADGV--FQINQYSGVI-TTRKALDYEKTASYSLIVQAVNMAGMASNATAII 1803

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
             +    N   PVFQQ  Y  ++SE A++NS V     S L       ++ EN+
Sbjct: 1804 QL-KDENDNPPVFQQLRYHGSISEAAAVNSVVLNPDDSPLVIKATDADRNENA 1855



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 22/177 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEA 75
           F+  V+  + +  A      + V + D NDN P        +I   E+      ++ + A
Sbjct: 429 FKLDVLEMDSELKA-----QVQVAIQDANDNTPTFHQ-SSYEILVNESVPVGTSVLTVSA 482

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D G N  ITYSI   S+ G   F+I+  SGVI TT  L    + + +   V+A+D G
Sbjct: 483 QDGDDGENGYITYSI---SSLGALPFQINQFSGVITTTEPLDFDFSSDSFVFIVRASDWG 539

Query: 133 G---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE---GASINSTVATITVSRLA 183
               + S+  V +  V   N   P+F++      +S       + +TV+ I +  LA
Sbjct: 540 SPYRRESEVYVTIH-VKNVNDNQPLFEKTACHGVISRDLPADQVITTVSAIDIDELA 595



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F +D   G I     L A +Q  Y++TVQATD G K++   V V+V+   N  +P+F Q 
Sbjct: 1425 FHVDKTVGTIIIAKPLDAEQQSFYNLTVQATD-GTKAAFAQVHVTVL-DTNDNAPIFSQP 1482

Query: 159  TYDVNVSE 166
            TY+V V E
Sbjct: 1483 TYEVTVPE 1490



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 13/122 (10%)

Query: 19   FRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGE---ARRQIVK 72
            F  +V AR+K  QG+      +L V L D+ND  P    IP + + +A E       +  
Sbjct: 886  FYLKVEARDKAEQGSQRFSVTTLKVVLEDVNDCPPVF--IPSVYKTRALEDLPVGTVLAW 943

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            +E  D DLG   ++ YS+ +  N     F +D  SG I    +L    Q  Y+++V+A D
Sbjct: 944  LETQDPDLGPGGQVQYSLANDYNGW---FEVDRTSGAIRLMKELDYETQQFYNLSVKAKD 1000

Query: 131  TG 132
             G
Sbjct: 1001 RG 1002



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 18   KFRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            ++ F+  A  +Q    SV  V + V + D NDN P           ++      +I+++ 
Sbjct: 2828 EYYFKATATVQQAKLDSVASVDVQVKVLDRNDNKPEFVTESFEAAVMEGVPLATRILQVR 2887

Query: 75   ATDNDLGVNAEITYSIYHV------SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            A D D G N ++ YS+  +        T  + F ID +SG I T   L       Y  TV
Sbjct: 2888 ALDADSGANGQVRYSLGGLIQSESQQETLFNTFSIDSQSGWISTLTNLDHETSSSYVFTV 2947

Query: 127  QATDTG 132
             A+D G
Sbjct: 2948 VASDFG 2953


>gi|269914130|ref|NP_001019301.2| protocadherin beta-13 precursor [Pan troglodytes]
          Length = 798

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEILDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|158298600|ref|XP_318800.4| AGAP009723-PA [Anopheles gambiae str. PEST]
 gi|157013962|gb|EAA14179.4| AGAP009723-PA [Anopheles gambiae str. PEST]
          Length = 1751

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 9   LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           L+RDPP+    ++F V A+++ G        + +NL D+NDNAP+ P  +      + G 
Sbjct: 199 LNRDPPHGRASWKFTVFAQDEGGEGLVGFTEVQINLKDVNDNAPQFPNGIAYGNVTENGT 258

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYHVS---NTGLHKFRIDPRSGVIETTGKLIAG 119
               ++ I+A D D    G NA++ YSI   +   +TGL  F I+P +G+I T    +  
Sbjct: 259 IGMHVMTIKAEDFDDINEGTNAKVIYSIEKNAIEEDTGLPIFDINPDTGLITTAVCCLDR 318

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           E+   YS+ + ATD GG        +  V   N   P F ++ + V V E
Sbjct: 319 EKTPDYSLQIVATDGGGLKGTGTASIK-VKDLNDMPPRFTKDEWFVEVEE 367



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 9   LDRDPP---NPGKFRFQVIAREKQGTAASVPVS---LTVNLNDINDNAPRL--PMIPPIQ 60
           LD + P   N  +FR QVI  +    +    V    + V L DINDN PR   P I    
Sbjct: 425 LDYEDPMQINGFRFRIQVIDNDGIDESDKYHVDHSWVIVKLKDINDNTPRFKKPHIEAAV 484

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAG 119
            +  +  + +   +A D D G  ++ITYSI   ++    +F ID    V I+      A 
Sbjct: 485 YENADVGKNLGTFKAVDIDKGGKSKITYSINRATDRK-RQFAIDQEGTVTIQRELDREAM 543

Query: 120 EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            ++S+ + ATD G   +++  I+ V +V   N  +PVF ++
Sbjct: 544 AKHSLEILATDDGVPPRTASAILTV-LVKDINDNAPVFAED 583


>gi|47227548|emb|CAG04696.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2289

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
           +++   LDR+      ++  V+A    + QG ++S  VS+TV   DINDN PR    P +
Sbjct: 90  IITSSVLDRE--ERANYQLLVVATDGGQPQGLSSSATVSVTVA--DINDNPPRFHHHPYV 145

Query: 60  -QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             I A  A   +V  +  TD D G NA++ YS+   S+    KF+IDP  G I    KL 
Sbjct: 146 THIPASTAAGSLVFAVTVTDEDAGSNAQLHYSLIGRSS---EKFKIDPIRGAITANEKLT 202

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              + ++TV+  D G   K+  T V V  V G +   PV +         E    N  V 
Sbjct: 203 GSSEVTLTVRVKDGGANPKTDMTTVTVRFVTGGSF--PVIKLKERAFTFPESQPANHIVT 260

Query: 176 TITVSRLASG 185
           T+T S +  G
Sbjct: 261 TVTGSSMRGG 270



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 14/157 (8%)

Query: 37  VSLTVNLNDINDNAPRL---PMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           VS+TV++ D+NDN P        P +Q  + +G     +VK+ A D D G NA + Y I 
Sbjct: 736 VSVTVHVTDVNDNPPVFEPDEYFPVVQENVPSGTT---VVKMNAKDGDSGANAVMAYVI- 791

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
             S++ L  F IDP +G I T G L   A + Y +TV+A +   +   ++  V++ + G 
Sbjct: 792 QSSDSDL--FVIDPNTGTITTQGFLDYEAKQVYHLTVKAFNVPDEERCSLANVNIQLKGA 849

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           N   P F    Y   VSE A   + V  +  S    G
Sbjct: 850 NEYVPRFVSKQYYFEVSEAAPKGTVVGEVFASDRDQG 886



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEAT 76
           K+   + AR++     S    + + + D+NDN P     P    I    + ++++ + A 
Sbjct: 307 KYVLWIEARDQGFPPYSSYEKVEITIQDVNDNYPVFEKDPFQADILENLSPQRVLVVSAV 366

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           D D G N ++ YSI  V     + F I+  +G I TT  L   +  QYS+ V+ATD G  
Sbjct: 367 DLDSGPNGQLEYSI--VDGNKENSFSINRATGEIRTTRPLDREKVAQYSLKVKATDWGLP 424

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                V+V + +   N  +P F +  +   V+E A +  TV  +T +   +G
Sbjct: 425 QKNMAVKVLINILDVNDNAPRFSK-IFSATVAENAPVGYTVTRVTTTDEDAG 475



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV ++D+NDNAP            +       ++ + ++D D+G N  I+YS+    + 
Sbjct: 21  VTVFVSDVNDNAPVFSTSTFHTTITEDAPTGTDVLLVNSSDADVGNNGVISYSL----SG 76

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTR 151
           G  +F I+P +G I T+  L   E+  Y + V ATD G   G SS   V V+V    N  
Sbjct: 77  GHGQFSINPATGQIITSSVLDREERANYQLLVVATDGGQPQGLSSSATVSVTVA-DINDN 135

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P F  + Y  ++    +  S V  +TV+   +G
Sbjct: 136 PPRFHHHPYVTHIPASTAAGSLVFAVTVTDEDAG 169



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 9/136 (6%)

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P  +  G A R    + A D D  +N  ITY+I   ++ GL  F I+ RSGV+   G L 
Sbjct: 657 PESLAVGTAIR---TLSARDKDKDMNGVITYNITSGNDRGL--FSINSRSGVLSLAGPLD 711

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E  Q+++ V A D G  +  + V V+V V   N   PVF+ + Y   V E     +TV
Sbjct: 712 FEEKQQHNLRVSAIDGGWIAKTSYVSVTVHVTDVNDNPPVFEPDEYFPVVQENVPSGTTV 771

Query: 175 ATITVSRLASGC-AIM 189
             +      SG  A+M
Sbjct: 772 VKMNAKDGDSGANAVM 787



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 8/170 (4%)

Query: 15  NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIV 71
           N  +  F V A ++         ++ VN+ D NDN P+        P+        R   
Sbjct: 503 NINRHSFIVTASDRAVQPLMSETTVIVNIVDSNDNPPQFESPNYFTPVAKSVKVGTRLTR 562

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
            +     D G+N+E+ Y I         KF++D  SG I     LI+   + + + + AT
Sbjct: 563 VVAHDKKDFGLNSEVEYVI--TGGNSSSKFQLDKSSGWITVASSLISDVNKIFMVGITAT 620

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           D G      +  + + V   N  +P F Q+     + E  ++ + + T++
Sbjct: 621 DRGNPPLSGLTSLRIAVTEENHHTPEFSQSQVSATIPESLAVGTAIRTLS 670



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
           ++ A+D D G N  + Y I+  S      F I+  +G I  TG L     E+ S+ V A 
Sbjct: 877 EVFASDRDQGDNGVVYYLIFGKSRK--KGFGINETTGQIYVTGALDREKEEKISLKVLAK 934

Query: 130 DTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + G      I EV V   V   N   PVF Q  YDV VSEG S    V  ++
Sbjct: 935 NAGSIRGADIDEVFVNITVLDAND-PPVFTQELYDVQVSEGLSPGGLVTFVS 985


>gi|395817724|ref|XP_003782306.1| PREDICTED: protocadherin Fat 2 [Otolemur garnettii]
          Length = 4316

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 2965 WRISSRKTLDRE--HTAKYLLRITASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3015

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+ R        I+K+ ATD D   N +ITYS++     G  +F++DP +G + T  
Sbjct: 3016 LYTGKVREDVFPGHLILKVFATDLDTDTNGQITYSLH---GPGAQEFKLDPHTGELTTLT 3072

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3073 ALDRERKDVYSLIAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3131

Query: 173  TVATI 177
             VA +
Sbjct: 3132 PVAVV 3136



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V ++DINDN P         RLP  + P+      +   + ++ A+D D G+N+++TY
Sbjct: 1227 VVVCVSDINDNPPVFSHKLFKVRLPERLSPV------SPGPVYRLVASDADEGINSKVTY 1280

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            +I      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P
Sbjct: 1281 NIEESDEEG---FSIDPVTGVVSSSNAFTAGEYNILTIKATDSGQPPLSASVRLHIEWIP 1337

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F ++ Y   V E   +N  V  I+V
Sbjct: 1338 QPRPSSIPLSFDESHYSFTVMETDPVNHMVGVISV 1372



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  ITY+         
Sbjct: 2057 VSVEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAITYAF----AEDY 2112

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV +V   N  +P+FQ
Sbjct: 2113 KYFRIDPYLGDISLKKPFDYQALNKYRLKVIAQDGGIPSLQTEEEV-LVTVRNKSNPLFQ 2171

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2172 SPYYKVRVPENITLYTPI 2189



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            + +IA+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3082 YSLIAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3141

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D G NA++ YS+   +++    F ID  +GVI     L    Q    +TV+A+D G    
Sbjct: 3142 DQGTNAQVVYSL---TDSAEGHFSIDATTGVISLEKPLRVRPQAALELTVRASDLGTPIS 3198

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
             S+   V VSVV G +   PVF    + V V E A + + V   AT+T
Sbjct: 3199 LSTLGTVTVSVV-GLDDYLPVFLNTEHSVQVPEDAQLGTEVLRLATLT 3245



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 13/173 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + PR   +      P     G    ++
Sbjct: 1517 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEANIPDTTAPG---TEL 1573

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQA 128
            +++ A D D G NAE+ YS+   ++     F I+   G+I    KL      Q+S+TV+A
Sbjct: 1574 LQVRALDADRGANAEVRYSLLKGNSEAF--FNINALLGIITLAQKLDRANHVQHSLTVKA 1631

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
             D G      +  V +   P+  S P+F +  Y V + E   I S +  ++ +
Sbjct: 1632 EDQGSPQWHDLATVIIHVHPSYSSAPIFSKTEYFVEIPESIPIGSPILLVSAT 1684



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 23/176 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--------- 68
            K+   +    K  ++ S   ++ VN+ D+N++ PR        +Q   + R         
Sbjct: 3287 KYFLSIECNRKSSSSLSDTTTIVVNITDVNEHRPRF-------LQGLYSTRVLENAILGD 3339

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSIT 125
             I+ + ATD D   N+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ 
Sbjct: 3340 VILTVSATDEDGPQNSAITYSL--VGGNQLGHFTIHPKKGELQ-VAKALDWEQTSSYSLR 3396

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ++ATD+G        +++V V   N   P F Q  Y   V E + I + V  + +S
Sbjct: 3397 LRATDSGQPPRHEDTDITVQVVDVNDNPPRFFQLNYSTTVQEYSPIGNKVLQLILS 3452



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P  P ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2256 TVEVLVEDINDNPPTFPQLVYTTSISEGLPAQTPVIQLLASDQDSGKNRDVSYQIVEDGS 2315

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2316 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2374

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F++  Y  NVSE A+    V  +
Sbjct: 2375 PPEFREPQYKANVSELATCGHLVLKV 2400



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2536 ITTLQKLDRENSTERVIDIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2593

Query: 62   QAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TY++  + N       ++P +GVI+    L+  E
Sbjct: 2594 QSNVSKDFPVMQVLAYDADEGQNADVTYTMDPMENLAEKVIAVNPTTGVIKVKESLVGLE 2653

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               +   ++A D G     ++V V +   PN  + P F +  Y  + SE     S + ++
Sbjct: 2654 NQTFDFKIKAQDGGPPHWDSLVPVRLQVVPNEVTLPKFSEPLYTFSASEDLPEGSEIGSV 2713



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQ 127
           I K+ ATD DLG NAE  Y++    NT    F I P SGV+   G L     E+Y + V 
Sbjct: 167 ICKVTATDADLGQNAEFYYAL----NTRSEMFAIHPTSGVVTVAGTLNVTWREKYELQVL 222

Query: 128 ATDTGGKSSQ 137
           A D   K S+
Sbjct: 223 AVDRMRKISE 232



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 8/164 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             F  +V A +K     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2343 HFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFREPQYKANVSELATCGHLVLKVQA 2402

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGG 133
             D D    + + Y I  +S      F I+  SG+I  +   K      Y++ V A+D  G
Sbjct: 2403 LDPDNRDTSRLEYLI--LSGNQDRHFSINKSSGIISMSNLCKKQLDPSYNLRVGASD--G 2458

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                T+         N  SP FQQ+ Y+  ++E A + + V  +
Sbjct: 2459 VFRATVPVYINTTNANKYSPEFQQHVYEAELAENAKVGTKVLEL 2502



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ + + D+NDN P     P   +  +       +++  A D D G + +++Y +    
Sbjct: 2782 VTVNIQVKDVNDNRPVFEADPYKAVLTENMPVGTSVIQATAIDQDTGRDGQVSYRLSADP 2841

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  SG I T  +L     + Y   V A D G     SSQ +V VS+    
Sbjct: 2842 GSNIHELFAIDSESGWITTLQELDCETRQTYHFYVVAYDHGQTVQLSSQALVVVSIT-DE 2900

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P F    Y  +V E +     V T+
Sbjct: 2901 NDNPPRFASENYKGSVVENSEPGEPVVTL 2929



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I +++  D D   N  + Y++  +
Sbjct: 805 LTVNVKDWNDNAPRF---PPGGYQLTISEDAEVGTTIAELKTEDADSEDNGRVRYTL--L 859

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 860 SPT--EKFSLHPLTGELVVTGHLDRESQPQYILKVEARDQPRKGHQ 903



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+++   + G    F++DP SGV+ T GKL       Q+++
Sbjct: 1465 ELLRVQATDQDKGKG--LIYTLHGSQDPGSASLFQLDPSSGVLVTVGKLDLSSGPSQHTL 1522

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V V++ V   N   P F Q  Y+ N+ +
Sbjct: 1523 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEANIPD 1565



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q+V + A D+D G++ E+ Y +   + TGL  F I+  +G+I+T   L       Y +TV
Sbjct: 1049 QVVVVAAHDDDSGLDGEVQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1106

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G     ++ EV + V   N   P   +  +  +V E   + ++V  +
Sbjct: 1107 LAVDRGSVPLSSVTEVYIEVTDVNDNPPQMSRAVFYPSVWEDVPVGTSVLQL 1158



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2212 LTLFTTDFKTGVLSVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2270

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2271 FPQLVYTTSISEGLPAQTPVIQLLASDQDSG 2301



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN P++   +  P   +       +++++A 
Sbjct: 1102 YWLTVLAVDRGSVPLSSVTEVYIEVTDVNDNPPQMSRAVFYPSVWEDVPVGTSVLQLDAW 1161

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   ++ G   F I P  G++ T  +L     +++ + V   D G  
Sbjct: 1162 DPDSSSKGKLTFNITSGNHMGF--FTIHPSIGLLSTARQLDRENKDEHILEVTVLDNGEP 1219

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            S ++   V V V   N   PVF    + V + E  S
Sbjct: 1220 SLKSTSRVVVCVSDINDNPPVFSHKLFKVRLPERLS 1255



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ITYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 476 VLTVAATDRDHGENGFITYSI---AAPKAVPFSIDPYLGIISTSKPMDYELMRRIYTFRV 532

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    +   EVSV   +   N   PVF++     ++ +   +  +V T++
Sbjct: 533 RASDWGSPFRRE-KEVSVSLQLKNLNDNQPVFEEVNCTGSIRQDWPVGKSVMTMS 586



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 101 FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           F+++PR+G+I TT  L   ++    +    + G SS T+V + +V   N  +P+F +++Y
Sbjct: 405 FKLNPRTGLITTTKLLDFHDRAHYQLHIRTSPGLSSTTVV-IDIVDC-NNHAPIFNRSSY 462

Query: 161 DVNVSEGASINSTVATITVSRLASG 185
           D  + E     ++V T+  +    G
Sbjct: 463 DGTLDENIPPGTSVLTVAATDRDHG 487



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           IN + P+     P+ I   E       + ++ ATD D G N ++ Y I   +  G   F 
Sbjct: 706 INHHIPQFEDHFPLSIDVLENVPINTPLSRLAATDPDAGFNGKLVYVIADGNEEGC--FD 763

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN 158
           I+  +G++     L       Y + V   D G   KSS  ++ V+V    N  +P F   
Sbjct: 764 IELETGLLTVASPLDYEVTNFYILNVTVFDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPG 822

Query: 159 TYDVNVSEGASINSTVATI 177
            Y + +SE A + +T+A +
Sbjct: 823 GYQLTISEDAEVGTTIAEL 841



 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 24/158 (15%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPR-------LPMIPPIQIQAGEARR 68
            F+F V   + QG+    A  P  + +N+ D+ND+ PR       + ++ P+ +       
Sbjct: 1835 FQFSVYVHD-QGSPILFAPRPAQVIINVRDVNDSPPRFLEQIYEIAVVGPVHLGM----- 1888

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            +++ ++A D+D    +EI Y I   +  G     I P +G I      + G    +TV+A
Sbjct: 1889 ELLTVQARDDD----SEINYGIKTGNADG--AVAIHPITGCISVLNPSLLGLSRKLTVRA 1942

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G      +V++++    + +S  F Q+ Y   V E
Sbjct: 1943 SD-GLYQDTALVKITLTQVLD-KSLQFDQDIYRAAVKE 1978


>gi|156523124|ref|NP_001095976.1| protocadherin alpha-13 precursor [Bos taurus]
 gi|154757543|gb|AAI51665.1| PCDHA13 protein [Bos taurus]
          Length = 950

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 14/166 (8%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-V 93
           V L + + D+NDNAP    +I  +++        +V K+ ATD D G NA+ITYS    V
Sbjct: 226 VQLLITILDVNDNAPEFDQLIYKVRMLENSLNGSLVIKLNATDPDDGTNADITYSFRRPV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPN 149
           S   L+ F I+P SG I T GKL   E   Y I+V+A D G    +    + V +V   N
Sbjct: 286 SPAILYAFYINPDSGEIRTKGKLDFEENKLYEISVEAIDKGNIPMAGHCTILVEIV-DTN 344

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAIM 189
             +P     +  + V E A + + +A ++VS   SG      C++M
Sbjct: 345 DNAPEVTITSLALPVREDAQVGTVIALVSVSDRDSGANGQVTCSLM 390



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+         V+L V + D NDNAP L  +PP       A  Q+V       
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LPPGPSGGPSAVSQVVSRSVDAG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 589 HVVAKVRAVDADSGYNAWLSYELQPAAGGSRSPFRVGLYTGEISTTRAL 637



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 37  VSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            ++ V + D NDNAP +    +  P++  A +    I  +  +D D G N ++T S+   
Sbjct: 334 CTILVEIVDTNDNAPEVTITSLALPVREDA-QVGTVIALVSVSDRDSGANGQVTCSLMAH 392

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           +   L     +  S V+++     +   Y + V A D G  S      VSV V   N  +
Sbjct: 393 NQFKLVSTFKNYYSIVLDSVLDRESASNYEVVVTARDGGSPSLSATASVSVEVADVNDNA 452

Query: 153 PVFQQNTYDVNVSE 166
           P F Q  Y V V E
Sbjct: 453 PAFPQPEYTVFVKE 466



 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 28/151 (18%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
           V + DINDN P  P          E+ ++I+  E            A+D D+GVN+ +TY
Sbjct: 121 VEVTDINDNPPVFP----------ESEKRIIIAESRPPETRFPLDGASDADIGVNSALTY 170

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            +    Y   +T   + ++   S V+  +      +++S+ + A+D G     + V++ +
Sbjct: 171 RVDPNDYFTLDTQNSREQMSSLSLVLRKSLDREEIQEHSLLLTASDGGKPELTSTVQLLI 230

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +   N  +P F Q  Y V + E  S+N ++
Sbjct: 231 TILDVNDNAPEFDQLIYKVRMLEN-SLNGSL 260


>gi|296485293|tpg|DAA27408.1| TPA: protocadherin alpha 13 [Bos taurus]
          Length = 950

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 14/166 (8%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-V 93
           V L + + D+NDNAP    +I  +++        +V K+ ATD D G NA+ITYS    V
Sbjct: 226 VQLLITILDVNDNAPEFDQLIYKVRMLENSLNGSLVIKLNATDPDDGTNADITYSFRRPV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPN 149
           S   L+ F I+P SG I T GKL   E   Y I+V+A D G    +    + V +V   N
Sbjct: 286 SPAILYAFYINPDSGEIRTKGKLDFEENKLYEISVEAIDKGNIPMAGHCTILVEIV-DTN 344

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAIM 189
             +P     +  + V E A + + +A ++VS   SG      C++M
Sbjct: 345 DNAPEVTITSLALPVREDAQVGTVIALVSVSDRDSGANGQVTCSLM 390



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+         V+L V + D NDNAP L  +PP       A  Q+V       
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LPPGPSGGPSAVSQVVSRSVDAG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 589 HVVAKVRAVDADSGYNAWLSYELQPAAGGSRSPFRVGLYTGEISTTRAL 637



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 28/151 (18%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
           V + DINDN P  P          E+ ++I+  E            A+D D+GVN+ +TY
Sbjct: 121 VEVTDINDNPPVFP----------ESEKRIIIAESRPPETRFPLDGASDADIGVNSALTY 170

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            +    Y   +T   + ++   S V+  +      +++S+ + A+D G     + V++ +
Sbjct: 171 RVDPNDYFTLDTQNSREQMSSLSLVLRKSLDREEIQEHSLLLTASDGGKPELTSTVQLLI 230

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +   N  +P F Q  Y V + E  S+N ++
Sbjct: 231 TILDVNDNAPEFDQLIYKVRMLEN-SLNGSL 260



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
           +   V A +K     +   ++ V + D NDNAP +    +  P++  A +    I  +  
Sbjct: 316 YEISVEAIDKGNIPMAGHCTILVEIVDTNDNAPEVTITSLALPVREDA-QVGTVIALVSV 374

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
           +D D G N ++T S+   +   L     +  S V+++     +   Y + V A D G  S
Sbjct: 375 SDRDSGANGQVTCSLMAHNPFKLVSTFKNYYSIVLDSVLDRESASNYEVVVTARDGGSPS 434

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                 VSV V   N  +P F Q  Y V V E
Sbjct: 435 LSATASVSVEVADVNDNAPAFPQPEYTVFVKE 466


>gi|14165387|ref|NP_114067.1| protocadherin alpha-11 isoform 2 precursor [Homo sapiens]
 gi|5456998|gb|AAD43737.1|AF152476_1 protocadherin alpha 11 short form protein [Homo sapiens]
 gi|3540160|gb|AAC34316.1| KIAA0345-like 3 [Homo sapiens]
 gi|119582399|gb|EAW61995.1| hCG1982192, isoform CRA_j [Homo sapiens]
 gi|187951519|gb|AAI36707.1| Protocadherin alpha 11 [Homo sapiens]
          Length = 810

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P        + +    A+  +V K+ ATD D GVN E+TYS+  + 
Sbjct: 226 VRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G H F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 286 PNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  ++ +A I+VS   SG
Sbjct: 345 NSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSG 379



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 21/130 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
            +FQV AR+      S  V+L V + D NDNAP L     +  QAG A            
Sbjct: 530 LQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584

Query: 68  ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
                + K+ A D D G NA ++Y +   +      FR+   +G I TT  L   +  ++
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRH 644

Query: 123 SITVQATDTG 132
            + V   D G
Sbjct: 645 RLLVLVKDHG 654



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++  A +    I  I  
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++         Y + V A D G  
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRENVWAYELVVTARDGGSP 432

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465


>gi|301605224|ref|XP_002932249.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Xenopus
           (Silurana) tropicalis]
          Length = 2977

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           +++I ATD D G+N  +TY+ +   N G   F+I+P SG+I T  KL       Y++ V 
Sbjct: 859 VLQISATDRDSGLNGRVTYT-FQGGNDGDGDFKIEPTSGIIRTNAKLDRENVPVYNLKVY 917

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G  S ++ V++ V V   N  +PVF+ N  D+ V E + + S VA IT S
Sbjct: 918 AVDRGNPSLKSPVDILVTVLDINDNAPVFKSNELDIYVEENSPVGSVVARITAS 971



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 27/197 (13%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ VS E LDR+      + F V AR++   A +   S+T+ + D+NDN P         
Sbjct: 586 WITVSTE-LDRETVE--LYTFGVEARDQGEPAMTSSASVTITVLDVNDNNPTFTE-KAYH 641

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       ++ + A D D  VN+ +TY I   S    ++F I  +SG     G LI
Sbjct: 642 LRLNEDAAVGSSVLTMTAVDRD--VNSVVTYQI--TSGNTRNRFAITSQSG-----GGLI 692

Query: 118 A---------GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                       QY +TV A+D  G  S T++    V   NT  PVFQ + Y V+VSE  
Sbjct: 693 TLALPLDYKQERQYVLTVTASD--GTRSDTVLVFINVTDANTHRPVFQSSHYTVSVSEDK 750

Query: 169 SINSTVATITVSRLASG 185
            I +++ TI+ +   +G
Sbjct: 751 PIGTSIVTISATDEDTG 767



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           IV I ATD D G NA I+Y++       + +FRIDP +G I T  +L   +Q  Y+I V 
Sbjct: 756 IVTISATDEDTGENARISYTM----EDNIPQFRIDPDTGTITTLIELDYEDQASYTIAVT 811

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T VE+ ++   N   P F ++ Y  +V E   ++++V  I+ +   SG
Sbjct: 812 AKDNGIPQKSDTTYVEILILDA-NDNMPQFMRDRYVGSVFEDVPLSTSVLQISATDRDSG 870



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 15/185 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + + LDR+  +      +V A +      S    LTV ++D ND+   +P+    + +
Sbjct: 267 VSTSQALDRETKD--THVLKVTATDFGSPRRSATTYLTVTVSDTNDH---MPVFEQSEYR 321

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
                  E   +++ I ATD D   NA + Y +   S      F IDPRSG++ T   + 
Sbjct: 322 ENIRENLEVGYEVMTIRATDGDALSNANMLYRLLGGSEGASAVFEIDPRSGIVRTRAPVD 381

Query: 118 --AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             A   Y + V+A D G   G  S T      V   N   P F +  Y V V E  S NS
Sbjct: 382 REAVADYQLIVEANDQGKDPGPKSATATVYIYVEDENDNYPQFTEKRYVVQVPENVSPNS 441

Query: 173 TVATI 177
            +  +
Sbjct: 442 HILQV 446



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 10/159 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            ++ +   LDR+  N   +  +V A ++   +   PV + V + DINDNAP        I 
Sbjct: 897  IIRTNAKLDRE--NVPVYNLKVYAVDRGNPSLKSPVDILVTVLDINDNAPVFKSNELDIY 954

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            ++       +V +I A+D D G NA+I Y I   +N  +  F++D  SG +     L   
Sbjct: 955  VEENSPVGSVVARITASDPDEGTNAQIMYQIVEGNNPEV--FQLDLFSGDLTALIDLDYE 1012

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
               +Y I VQAT +    S+  V V ++   N   PV Q
Sbjct: 1013 VKTEYVIVVQAT-SAPLVSRATVHVKLL-DKNDNDPVLQ 1049



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ + + D NDN P+      + +Q  E       I++++ATD D G NA + YSI
Sbjct: 405 SATATVYIYVEDENDNYPQFTEKRYV-VQVPENVSPNSHILQVQATDRDKGNNAIVYYSI 463

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK----SSQTIVEVSV 144
             VS     +F I   +G I+    L   A  +YS+ ++A D GG+    ++  +V V V
Sbjct: 464 --VSGNIKGQFYIHSFTGNIDVIHPLDYEAIREYSLRIKAQD-GGRPPLSNTTGMVTVQV 520

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V   N  +P+F    +   V E   I  +V  I  +   SG
Sbjct: 521 V-DVNDNAPIFVSTPFQATVLENVPIGYSVVHIQANDADSG 560


>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
          Length = 2905

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 17/196 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----- 55
           YL+   + LDR+  +   +  +V A +          +  + + D+NDN P         
Sbjct: 242 YLICVDQLLDREERD--SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQ 299

Query: 56  -IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            IP + +  G     ++++ A D D G N E+ YSI H  +T    F IDP +G+I T  
Sbjct: 300 SIPEV-VYPGSF---VLQVTARDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAA 355

Query: 115 KLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            L   +  Q  +TV ATD G    SS  +V V+ +   N   PVF+ N Y+V++ E   +
Sbjct: 356 PLDYEKDPQPQLTVLATDRGTPALSSSAVVHVA-LQDVNDNEPVFKSNFYNVSLKENTPV 414

Query: 171 NSTVATITVSRLASGC 186
            +    +T +   SG 
Sbjct: 415 GTCFLQVTATDSDSGA 430



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 17/187 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQA 63
            LDR+      +   V+ ++      S  +S+TV + D+NDNAP           P  +  
Sbjct: 1622 LDRE--QIASYSLIVVVQDHGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPV 1679

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
            G    Q+V   A D D G N +++   Y++ N  L  F+++P+SG I +   L    Q  
Sbjct: 1680 GALVLQLV---AEDPDEGTNGQVS---YYLGNESLGMFQVEPQSGCIRSAQALDRERQPT 1733

Query: 122  YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            YS   +A D+      S  +    VV   N   P F Q+   VN+S    +   VAT+  
Sbjct: 1734 YSFLAKAVDSAPWEPKSAAVRVTVVVRDVNDHVPAFLQSPLTVNLSRDTPLMDVVATMKA 1793

Query: 180  SRLASGC 186
                +G 
Sbjct: 1794 EDRDAGA 1800



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 22/180 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDRD      + F +IA +  G  + V V   V L D NDN P   +  P++  A  + +
Sbjct: 465 LDRDE-GTSAYDFTIIAVDGGGLNSMVYVK--VFLEDTNDNRP---VFYPLEYAASISTQ 518

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
                 ++++ A D D G+N  +TY I   ++  L  F ++  +GVI  +  L   A   
Sbjct: 519 SMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPL--FSLNKDTGVISLSWSLSGKANTL 576

Query: 122 YSITVQATDTGGKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
             + + A D GG  +Q    V +S+V G     PVF+Q  Y  +V E    GAS+ S  A
Sbjct: 577 VQLVISAQDGGGLQAQPNARVNISIVEG-TVSPPVFEQAQYFFSVPEDMPQGASVGSVQA 635



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 16/139 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L+V + D+ND AP     P  +    E   A   ++++ ATD DLG N +++Y       
Sbjct: 1444 LSVLVLDVNDEAPVFEK-PEYEAHVMENLPAGSPVLQVLATDRDLGANGQVSYG------ 1496

Query: 96   TGLH--KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
             GL    F I P++G+I TT  L     EQ+ +TV A D G   S T   V V  G  N 
Sbjct: 1497 -GLSGGPFSIHPQTGLIVTTRALDREEQEQHVLTVYARDAGLPPSLTKATVWVTVGDEND 1555

Query: 151  RSPVFQQNTYDVNVSEGAS 169
             +P  +  ++ V V E  S
Sbjct: 1556 HAPHLESESFSVEVPENQS 1574



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 16/141 (11%)

Query: 41  VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++++D+NDN P  P      ++P    +A E    +  ++A D D G N ++T+ +    
Sbjct: 702 ISVSDVNDNMPAFPTPSDSILLP----EATEPGTTVYTLQAEDRDSGANGQVTFELL--- 754

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTR 151
           + G   F ++  SG +   G L   A   YS+ + A D+G  + S T   +  V   +  
Sbjct: 755 SGGEGTFIVERASGAVRLLGALQYEAISAYSLAIVARDSGIPQLSSTFTLLVHVQAEDDN 814

Query: 152 SPVFQQNTYDVNVSEGASINS 172
            P+F   TY V V EG  +++
Sbjct: 815 GPIFDTLTYRVEVQEGVPVST 835



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 39   LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            LTV + D+NDN P        ++ P    AG     I+ + ATD D G N +IT+ +   
Sbjct: 2146 LTVLVEDVNDNVPTFTQVFYQVLLPEHTPAGTV---ILTVSATDPDSGSNGDITFHLAVP 2202

Query: 94   SNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK--SSQTIVEVSVVPGP 148
            S        IDP +G + TT ++    +     + V+A D G    SS   V++ V+   
Sbjct: 2203 SP----DVAIDPSNGTLFTTRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVL-DV 2257

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
            N  SP+FQ+  Y+ +V E     +TV       L +G A +++E
Sbjct: 2258 NDHSPLFQEPCYNASVPEDLRPGTTVLM-----LEAGDADLSRE 2296



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSN 95
            L + + D+NDN PR  +   +    ++      ++++ A D D GVN ++TY+I   +  
Sbjct: 1940 LRLVIQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGVNGQVTYAINQSLPM 1999

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTG-----GKSSQTIVEVSVVPG 147
             GL  + IDP++G I TT  ++  E +S   + V A D G     G ++ T+V + +   
Sbjct: 2000 PGL--YHIDPQTGTI-TTAAILDREIWSQTRLVVTAMDRGTPPLMGSATLTVVVMDI--- 2053

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
             N  SP      +++ V E   + + +A +T + + SG A+
Sbjct: 2054 -NDNSPTIPV-PWEIRVPENTLLGTQIAQLTGNDVDSGPAL 2092



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVVS   LDR+  N   +   + A +      S  ++L V++ DINDNAP     R   +
Sbjct: 27  LVVSNV-LDRE--NRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFNQSRYHTL 83

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               ++ G +   I+++ A+D D G N ++ Y I    +     F ID R+GVI    KL
Sbjct: 84  ISENLKPGSS---ILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVI----KL 136

Query: 117 IAGEQYSI------TVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVS 165
             G  Y +       VQA D       T   V++ V   N   P    +F        +S
Sbjct: 137 NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS 196

Query: 166 EGASINSTVATITVS 180
           EGA     VA I+VS
Sbjct: 197 EGAQPGQYVARISVS 211



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 13/126 (10%)

Query: 21   FQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIE 74
             QV A + Q G  +S  V + +++ D ND AP  P  P     P   QAG +   I   +
Sbjct: 1181 LQVSAEDTQHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPENAQAGSS---IFTFQ 1237

Query: 75   ATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            A D D +G N+++ Y++ H+   G   F++D RSG +     L   A   + + V+ATD 
Sbjct: 1238 ALDGDGVGPNSQVRYALLHLEPPGA-PFQLDGRSGQLSLRQGLDREATASFLLVVEATDQ 1296

Query: 132  GGKSSQ 137
                SQ
Sbjct: 1297 ARNVSQ 1302



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 20/163 (12%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDND 79
            V AR+    + S   ++ + + D+ND++P L   P       E  R    ++ +EA D D
Sbjct: 2234 VEARDHGSPSLSSWATVQLQVLDVNDHSP-LFQEPCYNASVPEDLRPGTTVLMLEAGDAD 2292

Query: 80   LG-VNAEITYSIYHVSNTGLHKFRIDPR----SGVIETTGKLIAGEQ--------YSITV 126
            L   NA   Y+I  VS  G + F+++ R     G + T G L+  E         Y++TV
Sbjct: 2293 LSRENAGFDYTI--VSGNGGNAFQVESRVARAGGQLRTQGALVLVESLDFEAIPVYNLTV 2350

Query: 127  QATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             A+D G  + S T+  +  V   N   PVF +  Y   VSE A
Sbjct: 2351 AASDRGLPQRSATVPVLITVQDVNDNPPVFSRAEYRAVVSEAA 2393



 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNT 96
            +LTV + DINDN+P +P+  P +I+  E      +I + T ND+     ++Y++    + 
Sbjct: 2045 TLTVVVMDINDNSPTIPV--PWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLLLEGDM 2102

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
                F +    G I  TG L   +  +Y++T++A+DT  ++   +    +V   N   P 
Sbjct: 2103 A-DTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANL--TVLVEDVNDNVPT 2159

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            F Q  Y V + E     + + T++ +   SG 
Sbjct: 2160 FTQVFYQVLLPEHTPAGTVILTVSATDPDSGS 2191



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPP 58
           + ++DP    + +  V+A ++   A S    + V L D+NDN P          L    P
Sbjct: 358 DYEKDP----QPQLTVLATDRGTPALSSSAVVHVALQDVNDNEPVFKSNFYNVSLKENTP 413

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKLI 117
           +           +++ ATD+D G    ++YSI     + +  +F ID  SG + T   L 
Sbjct: 414 VGTC-------FLQVTATDSDSGAFGSLSYSIGSGIGSIIPTQFSIDKHSGQLCTVQPLD 466

Query: 118 AGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E    Y  T+ A D GG +S   V+V  +   N   PVF    Y  ++S  +   + V
Sbjct: 467 RDEGTSAYDFTIIAVDGGGLNSMVYVKV-FLEDTNDNRPVFYPLEYAASISTQSMPGTAV 525

Query: 175 ATIT 178
             +T
Sbjct: 526 LRVT 529



 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 8/150 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            +A+VPV +TV   D+NDN P         +  +A     +++++ A D D G    + Y+
Sbjct: 2361 SATVPVLITVQ--DVNDNPPVFSRAEYRAVVSEAALPGTELLRVAAHDADSGPRGRVHYT 2418

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
            I      GL  F++   +G +     L    Q  +++ VQATDT G     +     V  
Sbjct: 2419 ISSGDQHGL--FQLHESTGALSLVRPLDREAQALHTLVVQATDTPGGHFALVPVAIEVKD 2476

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P F       ++ E     + V T+
Sbjct: 2477 INDNKPYFPVEMLSASIRENLPPGTLVTTL 2506


>gi|395508293|ref|XP_003758447.1| PREDICTED: cadherin-16 [Sarcophilus harrisii]
          Length = 827

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 15/190 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           +   + LDR+  +  K+   V  R  +G A S P+SLTV + D NDNAPR P    P ++
Sbjct: 288 ICLTQELDREMQD--KYLLSVWPRNAEGLAYSDPLSLTVLVMDENDNAPRCPPAEAPAEV 345

Query: 62  -QAGEARRQIVKIEATDNDL--GVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKL 116
            +      ++ +++ATD D     N+ + Y +      G     F +D  +GVI     L
Sbjct: 346 PELSPTGMEVTRLQATDADDPNTPNSHVVYKLLSQEPPGPEGSSFTVDHHTGVIVVQDTL 405

Query: 117 I-AGEQYSITVQATDT----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYD-VNVSEGASI 170
           I AGE Y + V A D     GG SS   V + V+   N  +PVF  + Y  V++ E  + 
Sbjct: 406 IRAGELYKLLVLAADLAGEEGGLSSTCEVTIKVL-DVNDHAPVFTASQYGPVSLPEDTAP 464

Query: 171 NSTVATITVS 180
            + VAT+T +
Sbjct: 465 GTRVATVTAT 474


>gi|397518032|ref|XP_003829202.1| PREDICTED: protocadherin alpha-11 [Pan paniscus]
          Length = 810

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P        + +    A+  +V K+ ATD D GVN E+TYS+  + 
Sbjct: 226 VRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G H F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 286 PNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  ++ +A I+VS   SG
Sbjct: 345 NSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSG 379



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++  A +    I  I  
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     +   Y + V A D G  
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRESVWAYELVVTARDGGSP 432

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 21/130 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
            +FQV AR+         V+L V + D NDNAP L     +  QAG A            
Sbjct: 530 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584

Query: 68  ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
                + K+ A D D G NA ++Y +   +      FR+   +G I TT  L   +  ++
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRH 644

Query: 123 SITVQATDTG 132
            + V   D G
Sbjct: 645 RLLVLVKDHG 654


>gi|307179933|gb|EFN68068.1| Putative fat-like cadherin-related tumor suppressor-like protein
           [Camponotus floridanus]
          Length = 998

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 16/139 (11%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D+NDNAP+    +   +I +       + +  ATD DLG NA +TYS+   +N 
Sbjct: 673 LPVTILDVNDNAPKFEKSLASFRISETALNGTNVWRANATDADLGDNARVTYSLVTETN- 731

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
               FR+DP +GV+   GKL    Q  Y + ++A D GGK        S+ +V V+ V  
Sbjct: 732 ---DFRVDPVTGVLSVFGKLDRERQEIYELRIRARDNGGKDTDTPPLYSEALVRVT-VDD 787

Query: 148 PNTRSPVFQQNTYDVNVSE 166
            N  +P F  +TY+V + E
Sbjct: 788 VNDNAPTFALSTYNVKIRE 806



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 10/109 (9%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEI 86
           GT       + +N+ D NDN P     P +++   E   A   +V++ A D D G NA I
Sbjct: 295 GTRKQSSAKVKINVVDTNDNDPTFDQ-PEMEVWLDENEPAGTSVVRVTAKDRDSGENAYI 353

Query: 87  TYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           +YSI ++       F ID  SG+++T   L       +Y + V+A+D G
Sbjct: 354 SYSIDNLKKV---PFEIDHFSGIVKTKQVLDYETMKREYLLHVRASDWG 399



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            R I+++ A D DLG N EI YS    ++    +F + P SGVI  T  L   E+  + +
Sbjct: 7   HRSILRVIAEDADLGRNGEIYYSFAEETD----QFAVHPVSGVITITRPLRYAERAIHEL 62

Query: 125 TVQATDTGG 133
            V A D G 
Sbjct: 63  VVLAKDRGA 71



 Score = 35.8 bits (81), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 17/169 (10%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           GT  +    +T+ +  +N  AP + +  +P I   +      IV++   D D  V+ +I 
Sbjct: 77  GTNHASTARVTIKVKQVNLYAPEIYVHQLPEIVENSNADIYAIVRV--IDRDKDVHGQIA 134

Query: 88  YSIYHVSNTGLHKFRIDPRSG---------VIETTGKLIAGEQYSITVQATDTG--GKSS 136
            S+  V       FR+ P  G         V+    +  A + Y++T++A D G   + S
Sbjct: 135 -SLDIVGGDPAGHFRVRPVGGPHSGEYNIEVLHLLDRETALQGYNLTLRAMDRGVPQRYS 193

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V V +    N  +PVF +  Y+V V E A IN+ +  + V+    G
Sbjct: 194 YKFVPVHLTD-MNDNAPVFSREIYEVKVPETAPINTPIIRLKVTDADEG 241


>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
          Length = 4590

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYH 92
            SL V++ DINDN P   +    +  A  +       ++++I A   D+  NAEITYSI  
Sbjct: 3216 SLIVSVLDINDNPP---VFEYREYSASVSEDTVVGTEVLQIHAASRDIEANAEITYSI-- 3270

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            VS     KF ID  +G I     L   +  +Y +TV+ATD G  S   +V V++ V   N
Sbjct: 3271 VSGNEHGKFSIDSATGAIFIIDSLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDIN 3330

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3331 DNTPVFSQDTYTAVISEDAMLEQSVITV 3358



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 9/187 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + + E LD +  N  +    V+ R++          + VN++D ND+AP           
Sbjct: 1515 LYTTEKLDHETMN--QHVLTVMVRDQDVPVKRNYARIIVNVSDTNDHAPWFTSSSYEGRV 1572

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
             ++      ++++ A D D G NAE+ YSI    N G + F IDP  G+I+   +L    
Sbjct: 1573 YESAAVGSAVLQVTALDKDKGKNAELVYSI-ESGNIG-NSFVIDPILGIIKIAKELDHSN 1630

Query: 120  -EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E+Y++ V+ATD G      +  V + V   +  SP F    Y   +SE ASI S V  +
Sbjct: 1631 QEEYNLMVKATDKGDPPMNEVASVHIFVTVSDNASPKFTAKEYSTEISESASIGSFVGMV 1690

Query: 178  TVSRLAS 184
            T   L+S
Sbjct: 1691 TAYSLSS 1697



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI 61
            + + E LDR+          ++A++  G  A   V+  V L D NDNAP+   M   + I
Sbjct: 2549 IFTSEKLDRETQAEKVIAISLMAKDSGGKVAFCTVN--VILTDDNDNAPQFRAMEYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +   R   ++K+ A+D D G NA+ITY+I   S        ID  SG+I T   LI  E
Sbjct: 2607 GSDVPRGTSVIKVWASDADEGTNADITYTIEAESENVKENLEIDSLSGIITTKESLIGLE 2666

Query: 121  QYSIT--VQATDTGGKSSQTIVEV--SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               +T  V+A D G    +++V V   ++P P    P F +  Y   VSE   + + +  
Sbjct: 2667 NEFLTFFVRAVDGGSPQKESVVPVYARILP-PEVSLPKFSEPFYSYMVSEDIPVGTEIDV 2725

Query: 177  I 177
            I
Sbjct: 2726 I 2726



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 17/167 (10%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIEATD 77
            + ++ +   G       ++ + L D+NDNAP    + P  I   +  E +  + +++ATD
Sbjct: 3094 YYLLMKATDGGGRFCQANIILTLEDVNDNAPVF-TVDPYSITVFENTEPKTLLTRVQATD 3152

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--- 132
             D G+N +I YS+    N+   +F ID  SG+I     L    Q  Y++T++ATD G   
Sbjct: 3153 ADAGMNRKIHYSLV---NSAEGQFSIDEFSGIIRLEKSLDRELQAVYTLTLKATDEGLPR 3209

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                +S  IV V  +   N   PVF+   Y  +VSE   + + V  I
Sbjct: 3210 RLSSTSSLIVSVLDI---NDNPPVFEYREYSASVSEDTVVGTEVLQI 3253



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K++LDR+  +   +   + A +  GT A+  V + V + D NDN+P         
Sbjct: 2977 WKVYVKKSLDREEKD--HYLLNITATD--GTFATRAV-VEVKVLDANDNSPVCEKALYTD 3031

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            I   +A   + I+++ ATD D+  NAEITY+++     G  KFR+ P +G ++T   L  
Sbjct: 3032 IVPEDALPGKLIMQVSATDADIRSNAEITYTLH---GPGAEKFRLTPDTGELKTLMPLDR 3088

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +Q  Y + ++ATD GG+  Q  + +  +   N  +PVF  + Y + V E
Sbjct: 3089 EQQAVYYLLMKATDGGGRFCQANI-ILTLEDVNDNAPVFTVDPYSITVFE 3137



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 17/166 (10%)

Query: 32   AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            A S    + V + D NDN P         RLP     + +    R  I ++ A D D G 
Sbjct: 1225 AKSTVARVIVKVLDENDNKPQFLQKFYKIRLPERGKPERERTARREPIYRVIAADKDEGP 1284

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-TVQATDTG--GKSSQTI 139
            NAEI+YSI      G  KF I+P++GV+ ++ K  A  +Y I +++A D G   KSS T 
Sbjct: 1285 NAEISYSIEDGDEHG--KFFIEPKTGVV-SSKKFSAAREYDILSIKAVDNGRPQKSSTTR 1341

Query: 140  VEVSVVPG--PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            + +  +P   P T    F++  +   V E   +   +  I V  L 
Sbjct: 1342 LHIEWIPKPIPPTEPIYFEEEFFSFTVMESDPVAHMIGVIAVEPLG 1387



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 23/179 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+         +V    K    A + V +TV   D+NDNAP    LP    +++ + E
Sbjct: 2040 FDREQQESFDVVIEVTEEHKPSVVAHIVVKVTVE--DVNDNAPLFVNLPYYAAVKVDS-E 2096

Query: 66   ARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLHKFRIDPRSGVIETTGKL---IAGE 120
                I ++ A D D G N E+ Y +  +H        F+IDP SG I    K       +
Sbjct: 2097 VGYVIRRVTAIDKDAGRNGEVHYYLKEHH------EHFQIDP-SGEISLKKKFEPDTVNK 2149

Query: 121  QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +Y +TV A D G    S++ IV ++V+   N   PVF++  Y   + E   ++S V  +
Sbjct: 2150 EYLVTVVAKDGGEPAFSAEVIVPITVM---NKAMPVFEKPFYSAEIPENIQLHSPVVHV 2205



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 16/172 (9%)

Query: 6    KENLDRDPPNPGKFRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQ 60
            ++NLD +      ++F V+A+   E     +SV VS+ V   D NDN P L   P     
Sbjct: 2764 EKNLDHE--TTKWYQFSVVAQYTNEDYNVISSVEVSIQVR--DANDNKPVLESNPYEAFI 2819

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI-- 117
            ++   A  ++++++ TD D G+N ++TYS+        +  F I+  +G I T  +L   
Sbjct: 2820 VENMPAGTRVIQVKGTDLDSGLNGQVTYSLDPSQELDVIESFAINMETGWITTLKELDHE 2879

Query: 118  AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              ++Y ITV A+D G K   SS  +VEV+V    N   P F    Y   VSE
Sbjct: 2880 MRDKYKITVIASDRGEKIQLSSLAVVEVTVT-DVNDNPPRFTAEIYKGTVSE 2930



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + ++LDR+      +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 IIETADHLDRE--TTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++IEA D D   + ++TY I   +  G   F I+ ++G+I TT + +  
Sbjct: 1149 VMENSPKDVSVIQIEAFDPDSSSSEKLTYKITSGNPQGF--FSINSKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G  +  T+  V V V   N   P F Q  Y + + E
Sbjct: 1207 EQQAEHILEVTVTDNGIPAKSTVARVIVKVLDENDNKPQFLQKFYKIRLPE 1257



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I++IEATD DLG N E+ YS+     
Sbjct: 809 LDIRILDANDNPPEF-LQDSYFVEVSENKELNSEIIQIEATDKDLGANGEVKYSLL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF I+  +GV++  G L   EQ  Y + ++A D   +  Q     I++VS +   N
Sbjct: 864 TDTDKFAINAVTGVVKVVGLLDHEEQPVYFLKIEARDQPTEEPQLFSTVILKVS-IEDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F  + Y V + E
Sbjct: 923 DNPPKFIPSNYHVKIRE 939



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ +N+ DINDN P         + + +A   + ++ + A D D   N  I Y+I    
Sbjct: 3320 VTVNINVTDINDNTPVFSQDTYTAVISEDAMLEQSVITVMADDADGPSNNHIHYTITD-G 3378

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            N G + F IDP  G I+ T KL+  E+   Y++TVQA+D G    +    V++ V   N 
Sbjct: 3379 NQG-NPFTIDPSRGEIKVT-KLLDREKISGYTLTVQASDNGNPPRRNTTTVNIDVSDVND 3436

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PVF +  Y + + E   I  +V  + V+
Sbjct: 3437 NPPVFSKGNYSIIIQENKPIGFSVLQLVVT 3466



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + + DINDN P         +   EA      ++++ ATD D G N  I+
Sbjct: 2262 TGAHADVFVDIIVEDINDNPPMFTE-QSYTVTLSEASVIGTSVLQVSATDADSGTNRGIS 2320

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVS 143
            Y +          F ID  +G+I TT  L     +Q+ + ++A D G    SS T++ V 
Sbjct: 2321 YHLIEDDTESHEYFHIDSSTGLILTTRTLDYEKIQQHKLLIRAIDGGMLPLSSDTVITVD 2380

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V    N   P+F Q  Y+  +SE A     V  +  S
Sbjct: 2381 VT-DLNDNPPLFNQLVYEAKISELAPRGHFVTCVQAS 2416



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID   G+IET   L       Y +TV 
Sbjct: 1054 VMTVSAYDEDEGRDGEIRYSIRDGSGMGV--FRIDEEKGIIETADHLDRETTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVVPG------PNTRSPVF 155
            ATD G     + +E+ +  G      P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVY 1145



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 39   LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +TV++ D+NDN P    ++   +I     R   V  ++A+D D     ++ YSI  ++  
Sbjct: 2377 ITVDVTDLNDNPPLFNQLVYEAKISELAPRGHFVTCVQASDADRSDADKLEYSI--MTGN 2434

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
                F I+ ++G+I  +   +      Y + V  +D   +SS   V V+V    N  SPV
Sbjct: 2435 DQKNFVINSKTGIITISNLRRQALKPHYILNVSVSDGVFRSSAQ-VRVTVTSA-NMHSPV 2492

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F QN Y+V ++E A +++ V  +      SG
Sbjct: 2493 FSQNEYEVELAENAPLHTLVTVVRARDEDSG 2523



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  N   F  QV         A    ++T+ + DIND  P           ++P  
Sbjct: 1835 SLDYEETNIFHFSVQVHDMGIPRLYAEYAANVTIYVVDINDCPPVFSRELYDTSILVPTY 1894

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +++ + ATD D G+ +++ YSI    N G  KF I+P++G I         
Sbjct: 1895 K------GVKVISVNATDADSGIFSQLIYSIIE-GNIG-EKFSINPKTGDITVQNTTQLR 1946

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +Y +TV+A+D G  +S   V+++V     ++   F Q++Y   V E ++   T+A IT
Sbjct: 1947 SRYELTVRASD-GRFASTASVKINVKESKVSQLK-FTQSSYSAVVQENSTEAKTIAVIT 2003



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 37   VSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
            V L V++ D+NDN P+ +P    ++I+       I+  +EA D DLG ++++ YS+    
Sbjct: 912  VILKVSIEDVNDNPPKFIPSNYHVKIREDLPEGTIITWLEAYDPDLGQSSQVRYSLL--- 968

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            ++G   F +D  SG I    +L   ++  Y++TV+A D G
Sbjct: 969  DSGDGTFDVDKLSGAIRIVQRLDYEKKQLYNLTVRAKDKG 1008



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  I+  E +     I+ + ATD D G N ++ Y I   +      
Sbjct: 708 HSLNMHTPQFRSTLPSSIEVREDQPVGSSIILLNATDLDTGFNGKLVYVISGGNEDS--S 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  SG+++    L     ++Y++ V   D G   KS+  ++++ ++   N   P F 
Sbjct: 766 FIVDMESGMLKILSPLDREVKDKYNLNVTVYDLGIPQKSAWHLLDIRILDA-NDNPPEFL 824

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q++Y V VSE   +NS +  I
Sbjct: 825 QDSYFVEVSENKELNSEIIQI 845



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEAT 76
           +   V A EK  T A     + V + D ND  P   P    + +    A R  I ++ AT
Sbjct: 117 YMLTVKAVEKN-TNAETRTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSAT 175

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           D D+G N E  YS    ++     F I P SGV+  TG+L  +  + Y + + A D G K
Sbjct: 176 DADIGTNGEFYYSFKERTDV----FAIHPTSGVVVLTGRLDYLDTKLYEMEILAVDRGLK 231



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I+++ ATD D     ++ Y+I   ++   L KFR+DP +G + TT KL      Q+ +T
Sbjct: 1475 EILQVSATDRD--EKNKLIYTIQSSTDPISLKKFRLDPGTGSLYTTEKLDHETMNQHVLT 1532

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1533 VMVRDQDVPVKRNYARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSAVLQVT 1586



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI  + K +  E    Y++TVQ T+  G ++   V V +    N   P+F Q
Sbjct: 1711 FAINPNSGVI-VSQKALDFETLPVYTLTVQGTNMAGLTTNATVLVHL-RDENDNIPIFMQ 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
            + Y   +SE AS+NS V T
Sbjct: 1769 SEYTGLISESASVNSVVLT 1787



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQA 128
            + A D D G    ITY I  +++    +F I  R G I T+ KL    Q     +I++ A
Sbjct: 2515 VRARDEDSGTYGHITYHI--INDFAKDRFYISER-GQIFTSEKLDRETQAEKVIAISLMA 2571

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             D+GGK +   V V ++   N  +P F+   Y+VN+       ++V  +  S    G
Sbjct: 2572 KDSGGKVAFCTVNV-ILTDDNDNAPQFRAMEYEVNIGSDVPRGTSVIKVWASDADEG 2627


>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
          Length = 2607

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP---- 58
            + S++ LDR+      +RF V+A ++ G   +    + +N+ DINDNAP  P +P     
Sbjct: 1065 IYSQKILDRE--ERALWRFVVLATDEGGEGLTGFADVIINIWDINDNAPVFPCMPSNCNG 1122

Query: 59   IQIQAGEARRQIVKIEATDND---LGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIETT 113
               +       I+++ A D D   +G+NA +TY I     ++  +  F+I+P +G I  T
Sbjct: 1123 TVFENSPEDTFIMEMTAVDLDDTNVGLNAILTYRIVENVKNDFDMDVFKINPSTGNIYVT 1182

Query: 114  GKLI---AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G ++     ++Y +T++A D GG +      + V    N   P F Q  + V + E +++
Sbjct: 1183 GGMLDRETADKYFLTIEAKDGGGLTGTGTATIWVA-DVNDHIPSFTQEIWHVVIPEASTV 1241

Query: 171  NSTVATITVSRLASG 185
            NS V  I+     SG
Sbjct: 1242 NSEVLEISAVDGDSG 1256



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 17/174 (9%)

Query: 22  QVIAREKQGTAASVPVS----LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
             + R +    A+VP++    + +N+ D+NDN P     +      +  +    + ++ A
Sbjct: 754 HFLLRIRAQNVAAVPLASFATVYINVTDVNDNVPFFTSSIYEASVTEGADVGTMVFQVSA 813

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD--- 130
           TD DLG N EITYS+    +     F +D ++G I T       ++  Y + V++TD   
Sbjct: 814 TDLDLGQNGEITYSLLPDRSEDYTFFHLDSKTGSIYTASVFDREKKASYLLEVKSTDGSE 873

Query: 131 ------TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                  G  +S T      +   N   P F +N Y+VNV E   + STV T++
Sbjct: 874 SSRPGKHGQPNSDTAYVRVFISDVNDNKPSFTKNVYEVNVDEDQDVGSTVITVS 927



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 19/172 (11%)

Query: 21  FQVIAREKQ---------GTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            Q+  REKQ            A+ P+     +TV + D+NDN PR           +  +
Sbjct: 532 LQIFDREKQREHPITVTATDQAAEPLIGICQITVVILDVNDNNPRFENSHYEYFLREDTD 591

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
                +++ A D+D G NA ITYSI   +      F I+P +G +  T  L+     +  
Sbjct: 592 VGTSFLRVAAHDDDYGSNASITYSI---AKGKPKYFEINPTTGWVYATQPLLQKSFITQE 648

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + A D G +SS+  + V+V    N + P ++++TY V + E  + ++++ TI
Sbjct: 649 IIAMDGGNRSSKAELRVTVTSAKN-QPPRWERDTYQVIIPESTTRDTSILTI 699



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
           ++++EATD D G N E+ Y + H  +  L  F IDP +GV+ TT ++   E   ++ ITV
Sbjct: 490 VLRVEATDADEGTNGEVKYGLMH-RDGALPMFNIDPDTGVL-TTLQIFDREKQREHPITV 547

Query: 127 QATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD   +    I +++VV    N  +P F+ + Y+  + E   + ++   +
Sbjct: 548 TATDQAAEPLIGICQITVVILDVNDNNPRFENSHYEYFLREDTDVGTSFLRV 599



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 11/135 (8%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQA----GEARRQIVKIEATDNDLGVNAEITYSIYH 92
           V L + + D+NDN P   M P   +        A  ++ K+ A D D   N  +    Y 
Sbjct: 41  VHLELTVTDVNDNVPEWAMQPFPYLATVSPNASAGSKVYKLLAEDQDEEENGAVE---YF 97

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
           +   G  +F ++  +G I+TTG  +  E +Y +TV A D  G+       +SV  G   R
Sbjct: 98  LVGGGDDRFEVERDTGWIKTTGLSLEKEREYVLTVMAADKPGRQGSPAY-ISVFAG--RR 154

Query: 152 SPVFQQNTYDVNVSE 166
            P F   +Y   + E
Sbjct: 155 PPQFSNTSYAAYIPE 169



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
            K G   S    + V ++D+NDN P     +  + + +  +    ++ + A D D G NA+
Sbjct: 879  KHGQPNSDTAYVRVFISDVNDNKPSFTKNVYEVNVDEDQDVGSTVITVSANDEDEGTNAK 938

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVS 143
            + Y I    NTG   F ++P  G I     L   E   Y + + A+D G      IV ++
Sbjct: 939  LRYQI-TAGNTG-GVFDVEPEMGAIFIARPLDYEETQLYELHLLASD-GKWEDYAIVIIN 995

Query: 144  VVPGPNTRSPVFQQNTY 160
            +V   N  +PVF  N Y
Sbjct: 996  IV-NKNDEAPVFALNEY 1011


>gi|440909686|gb|ELR59571.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Bos grunniens mutus]
          Length = 2919

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 238 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 290

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 350

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  + T      V   N  +P F +  Y V V E  S
Sbjct: 351 PVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVS 410

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 411 PGAPVLRVTAS 421



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 778 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 829

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 830 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 888

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T ++V+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 889 YAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 943



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 573 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 631

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 632 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 682

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VN++E     +TV  I+ +   +G
Sbjct: 683 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 739



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 728 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 783

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 784 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 842



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 869  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVF 926

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 927  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 984

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 985  DRPEYVLVIQATSAPLVSRATV 1006



 Score = 38.1 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 12/145 (8%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S
Sbjct: 381 AIFLSVEDDNDNAPQFSEKRYV-VQVREDVSPGAPVLRVTASDRDKGSNALVHYSI--MS 437

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPN 149
                +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+   N
Sbjct: 438 GNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL-DIN 496

Query: 150 TRSPVFQQNTYDVNVSEGASINSTV 174
             +P+F    +   V E   +   V
Sbjct: 497 DNAPIFVSTPFQATVLESVPLGYLV 521


>gi|194680340|ref|XP_581926.4| PREDICTED: protocadherin-11 X-linked [Bos taurus]
 gi|297492723|ref|XP_002699811.1| PREDICTED: protocadherin-11 X-linked isoform 4 [Bos taurus]
 gi|296471046|tpg|DAA13161.1| TPA: protocadherin 11 Y-linked isoform 4 [Bos taurus]
          Length = 1022

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + L D NDNAP     P I +   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLIKLKDENDNAPVFTQ-PFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL----- 505

Query: 96  TGLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            G+    +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N
Sbjct: 506 -GIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQN 564

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SPVF  N Y+  V E    + TV  ITV+
Sbjct: 565 DNSPVFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----I 59
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIQPNISFDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSF 682

Query: 60  QIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++ +  A     +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVSPSANPGTVVFTVVAIDNDTGMNAELRYSILGGNTKGL--FMIDQTTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 LADLGLHKLIVKAKDLGQPDS 761



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D G+N    Y +      G + 
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLIK----GQNI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    +IET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+++  +V++ E A + S+V  +
Sbjct: 241 -DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271


>gi|10433211|dbj|BAB13935.1| unnamed protein product [Homo sapiens]
          Length = 744

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|426257901|ref|XP_004022560.1| PREDICTED: protocadherin-11 X-linked-like isoform 5 [Ovis aries]
          Length = 1334

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V V   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V A++    + S    +T+N+ D+NDN P            ++PP    +      
Sbjct: 639 YTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVPP----SASPGTV 694

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           +  + A DND G+NAE+ Y+I   +  GL  F ID  +G I    K +  +   + + V+
Sbjct: 695 VFTVVAIDNDTGMNAELRYNIVGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVK 752

Query: 128 ATDTGGKSS 136
           A D G   S
Sbjct: 753 AKDLGQPDS 761



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVLLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
            gallopavo]
          Length = 4281

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 13/189 (6%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  +V+A + +  A +    + + + DINDN+P    I    
Sbjct: 2971 WTISSKKPLDRE--DTEKYLLKVMASDGKFQATT---EVEIFVLDINDNSPECGQIFYTG 3025

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              + +A+    I+KI ATD D+G NA+ITYS++     G  +FR+   +G + T+  L  
Sbjct: 3026 RVSEDAQPGHFILKISATDPDVGSNAQITYSLH---XPGAEEFRLGAHTGELTTSAPLDR 3082

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             ++  Y +  +ATD GG+S Q  + ++ +   N  +P F  +   V V +  +  + +A 
Sbjct: 3083 EQKPTYHLVAKATDGGGRSCQADIMLT-IEDTNDNAPRFFPSHCAVAVFDNTTTKTPIAV 3141

Query: 177  ITVSRLASG 185
            ++   L  G
Sbjct: 3142 VSARDLDEG 3150



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 14/162 (8%)

Query: 28   KQGTAASVPVSLTV-NLNDINDNAPRL---PMIPPIQIQA--GEARRQIVKIEATDNDLG 81
            ++G+A+   V++ V N+ DIND+AP     P    I+  A  GE    I+ + A D D  
Sbjct: 3304 RKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEI---ILTVSADDLDGT 3360

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTI 139
            +N +ITYSI   +  G   F I P+SG I     L   E   YS+TV+ATD G  +  + 
Sbjct: 3361 MNNQITYSIVEGNPQG--HFAIQPKSGQISIAKHLDREEISSYSLTVRATDNGHPAQFSD 3418

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V V V V   N   P F Q  Y V V E A + ++V  + +S
Sbjct: 3419 VAVRVHVSDVNDNPPRFFQLNYSVVVQENAPVGTSVLELIMS 3460



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + DINDN P     P     ++   +   ++++ A D D G + ++TYS+   S
Sbjct: 2789 VSVNIQVQDINDNKPVFEADPYRAFVMENMPSGTTVIQVTANDQDTGSDGQVTYSLEAES 2848

Query: 95   NTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGPN 149
                  F ID  +G I T  +L     E Y   V ATD G K   SSQT+VEV+ V   N
Sbjct: 2849 GNLRGLFTIDGETGWITTLKELDCETQETYRFYVVATDHGRKVQLSSQTLVEVT-VSDEN 2907

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +P F  + Y  +V E A     + T++
Sbjct: 2908 DNAPQFTSDFYKGSVIENAEPGQIIVTLS 2936



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + + + D NDN P  P    M+   + +A E    + ++ A+D D G N+++TY+I    
Sbjct: 1231 VVIQVLDANDNPPSFPHKLFMVQLPEREASETPLPVYRLIASDRDQGQNSQVTYTIEE-E 1289

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV--PGPNT 150
              G+  F I+P +G++ +     A E   +TV+ATD G    SS   + +S V  PGP++
Sbjct: 1290 EEGI--FTINPTTGMVLSRKAFPASEYNILTVKATDGGSPPLSSHVRLHISWVARPGPSS 1347

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITV 179
                F +  ++  V E   +N  V  I++
Sbjct: 1348 EPLAFDEPHFNFAVMETDPVNHMVGVISI 1376



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +I+++ A D D G NAEI YS+   +  G   F IDP SG+I    KL   +Q  +++ V
Sbjct: 1580 EILQVRALDQDQGANAEIHYSLQAGNAEGF--FSIDPHSGIITVAQKLDPSKQERFTLIV 1637

Query: 127  QATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            +A D G    K S T V V + P   T  P F +  Y   +SE A++ S +  ++ S L+
Sbjct: 1638 KAEDQGFPQLKDSAT-VHVRIRPSDQT-PPKFPEAEYITEISESAAVGSPLIQVSASSLS 1695



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P+   +P    +Q G E    + ++ ATD D+G NA ITYS      
Sbjct: 2062 TVKVYVEDVNDNPPQFENVPYYTSVQDGMEPGDVLFQVSATDKDIGNNAVITYSFAE--- 2118

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 FRIDP  G I     L   A  +YS+ V A D G        EV V+   N  +P
Sbjct: 2119 -DYKYFRIDPYLGDISLKKPLDYHALNKYSLRVIAKDNGEPPLLAEEEV-VISVRNKSNP 2176

Query: 154  VFQQNTYDVNVSE 166
            +FQ   Y V V E
Sbjct: 2177 LFQSLYYRVKVPE 2189



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 15/177 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR 67
            LDR+     K  + ++A+   G   S    + + + D NDNAPR  P    + +      
Sbjct: 3080 LDREQ----KPTYHLVAKATDGGGRSCQADIMLTIEDTNDNAPRFFPSHCAVAVFDNTTT 3135

Query: 68   RQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  I  + A D D G+NAE+ YS+   S++    F I+  +GVI     L   +   + +
Sbjct: 3136 KTPIAVVSARDLDEGLNAEVVYSL---SDSANGHFSIEETTGVIRLEKPLKDSQHSAFEL 3192

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            TV ATD G     S+   V VSVV   N   PVF    Y   V E  ++ + V  ++
Sbjct: 3193 TVCATDQGTPQPLSALGTVTVSVV-DLNEYLPVFLAPEYVAMVKEDVAVGTEVLNLS 3248



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 16/165 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVK 72
            +FR +V A +      S    + V++ DINDN P    +   Q +A           ++K
Sbjct: 2351 QFRMKVRAADHGMPPLSSDALVIVDVTDINDNPPEFSQL---QYEAKVSEMATCGHIVIK 2407

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++A D D G    + Y I  +S      F I+  SG+I    +     +  YS+ V A+D
Sbjct: 2408 VQALDPDSGDTTRLEYVI--LSGNDHRHFTINSTSGIISMFNRCKKDLESSYSLRVSASD 2465

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               KS+   V V +     N  SP FQQN Y+  ++E A I + V
Sbjct: 2466 GVFKST---VPVYINTTNANKYSPSFQQNMYEAELAENAEIGTKV 2507



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 13/177 (7%)

Query: 19   FRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIE 74
            +  ++ AR+  K G        LTV L D+NDN P  LP +  +++ +       ++ +E
Sbjct: 891  YALKIKARDQPKTGYELFSITDLTVTLEDVNDNDPHCLPALNSVKVPEDLPVGTVLLFLE 950

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A D D G   E+ YS+    N     F ID  +G +    +L     + Y++TVQ +D+G
Sbjct: 951  AFDPDAGSGGEVRYSLV---NDEEMMFHIDKLTGALRLEKELDYEKKDSYNLTVQVSDSG 1007

Query: 133  ---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                +SS   +EV+V+    N   P F    +   V E +   ++V  +    +  G
Sbjct: 1008 KPVSRSSLCHLEVNVLDVNENLYPPRFASFVFKGWVQENSPEGTSVMMVAAKDIDKG 1064



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 26/163 (15%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDL 80
           T++    ++ +++ D N++AP              +PP           ++ + ATD D 
Sbjct: 439 TSSHTSATVVIDIIDCNNHAPSFSQSSYRGAFDENVPP--------GTSVLTVRATDEDE 490

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSS 136
           G N  +TY+I   +N     F IDP SGVI T+  +   +    Y + V A+D G     
Sbjct: 491 GDNGFVTYTI---ANQKSVPFVIDPYSGVISTSKSMDYELMQRWYHLRVWASDWGSPXRH 547

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +T V VS+ +   N  +PVF++ +   ++     + + VAT++
Sbjct: 548 ETEVYVSLMLSNVNDNAPVFEKASCSGSIPRDFPVGNPVATVS 590



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 62/143 (43%), Gaps = 7/143 (4%)

Query: 41   VNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + DINDN P    I       +   A   +V+I A+D D G N  ++Y I    +   
Sbjct: 2267 VEVEDINDNPPVFSEIIYTASVSENMPAHTPVVQIFASDKDSGRNKMVSYQILDDGSDTT 2326

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPV 154
              F ID  +G I T   L   E  Q+ + V+A D G    SS  +V V V    N   P 
Sbjct: 2327 KFFNIDTSTGQITTAQALDYEETQQFRMKVRAADHGMPPLSSDALVIVDVT-DINDNPPE 2385

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F Q  Y+  VSE A+    V  +
Sbjct: 2386 FSQLQYEAKVSEMATCGHIVIKV 2408



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2544 ITTLQKLDRENSTERVIAIKVMAKDGGGKVAFCTVKII--LTDENDNPPQFKASEYTLSI 2601

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++ YS+  V +       I+  +GV++    L+  E
Sbjct: 2602 QSNVSKGSPVIQVLAYDADEGANADVVYSVDSVEDVSEDIVEINAATGVVKVKESLVGLE 2661

Query: 121  Q--YSITVQATDTGGKSSQTIVEVS--VVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               ++  V+A D       ++V V+  +VP   T  P F +  Y  + SE     S + +
Sbjct: 2662 NRAFNFKVKAEDGRPPHWNSLVPVNLQIVPREVTL-PRFSEPLYTFSASEDLPEGSEIGS 2720

Query: 177  I 177
            +
Sbjct: 2721 V 2721



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 19   FRFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKI 73
            F   V A + QGT   +    ++TV++ D+N+  P   + P       E      +++ +
Sbjct: 3190 FELTVCATD-QGTPQPLSALGTVTVSVVDLNEYLPVF-LAPEYVAMVKEDVAVGTEVLNL 3247

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A   D   N EI Y I + ++ G  KF+++  +G +   G L   A  +Y ++++ T  
Sbjct: 3248 SALTRDNTENTEIKYEIVNGNDHG--KFQLNSNTGALYINGSLDFEASHEYYLSIEGTRK 3305

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            G  S   +  V + +   N  +P F Q+ Y  ++ E A++   + T++   L
Sbjct: 3306 GSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEIILTVSADDL 3357



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 12/146 (8%)

Query: 40  TVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           T+NL+ IN NAP+     P  I   E       I  + A D D G N ++ Y I   S+ 
Sbjct: 703 TLNLHLINHNAPKFDDSFPRSIDIIENVPINSTIADLSAVDPDTGFNGKLVYVI---SDG 759

Query: 97  GLHK-FRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            +   F ID   G+++    L     +    +ITV    T  KSS  ++ V+V+   N  
Sbjct: 760 NVDSCFTIDLELGLLQVLSPLDHERTSFYILNITVYDLGTPQKSSWKLLAVNVL-DTNDN 818

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +P F Q  Y V + E  +  +T+A +
Sbjct: 819 TPRFPQGAYWVTIPENVATGTTIAQL 844



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG+L      ++S TV+ATDT  G  S+  VEV V    N   PV
Sbjct: 2220 LKLFSTDFKTGVLTVTGQLDYEIETKHSFTVRATDTALGSFSEARVEVEV-EDINDNPPV 2278

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F +  Y  +VSE    ++ V  I  S   SG
Sbjct: 2279 FSEIIYTASVSENMPAHTPVVQIFASDKDSG 2309



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 101 FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           F+I+P +G+I T   L   EQ +  ++   T   +S T+V + ++   N  +P F Q++Y
Sbjct: 409 FKINPHTGLITTVRALDFHEQSNFQLEVATTSSHTSATVV-IDIIDC-NNHAPSFSQSSY 466

Query: 161 ----DVNVSEGASINSTVAT 176
               D NV  G S+ +  AT
Sbjct: 467 RGAFDENVPPGTSVLTVRAT 486



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 18  KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVK- 72
           K  + +I +  + T A      + +++ D ND  P     PP   + I+     + +V  
Sbjct: 115 KDSYMLIIKATENTFAYEAWAKVLIHILDRNDLKPLFS--PPSYKVSIREDTPLKTVVST 172

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + ATD D G NAE  Y++    NT    F I P +G + TTG+L
Sbjct: 173 LSATDADAGQNAEFYYAL----NTKSDLFTIHPTTGAVVTTGRL 212


>gi|426257903|ref|XP_004022561.1| PREDICTED: protocadherin-11 X-linked-like isoform 6 [Ovis aries]
          Length = 1022

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + L D NDNAP     P I +   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLIKLKDENDNAPVFTQ-PFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL----- 505

Query: 96  TGLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            G+    +F +D R+G++    KL     E+YS TV A D G  S  T   V V V   N
Sbjct: 506 -GIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQN 564

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SP+F  N Y+  V E    + TV  ITV+
Sbjct: 565 DNSPIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLP 54
           V + N+  D      + F V A++    + S    +T+N+ D+NDN P            
Sbjct: 624 VIQPNISFDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVFVVPPSNYSFE 683

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           ++PP    +      +  + A DND G+NAE+ Y+I   +  GL  F ID  +G I    
Sbjct: 684 LVPP----SASPGTVVFTVVAIDNDTGMNAELRYNIVGGNTKGL--FMIDQTTGNITLKE 737

Query: 115 KLIAGE--QYSITVQATDTGGKSS 136
           K +  +   + + V+A D G   S
Sbjct: 738 KCVLADLGLHKLIVKAKDLGQPDS 761



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVLLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386



 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D G+N    Y +      G + 
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLIK----GQNI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    +IET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+++  +V++ E A + S+V  +
Sbjct: 241 -DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271


>gi|426257893|ref|XP_004022556.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Ovis aries]
          Length = 1344

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V V   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V A++    + S    +T+N+ D+NDN P            ++PP    +      
Sbjct: 639 YTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVPP----SASPGTV 694

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           +  + A DND G+NAE+ Y+I   +  GL  F ID  +G I    K +  +   + + V+
Sbjct: 695 VFTVVAIDNDTGMNAELRYNIVGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVK 752

Query: 128 ATDTGGKSS 136
           A D G   S
Sbjct: 753 AKDLGQPDS 761



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVLLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|354474447|ref|XP_003499442.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cricetulus
            griseus]
          Length = 4323

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  +V A + +    SVPV + V   DINDN+P+   +    
Sbjct: 2942 WRISSKKTLDRE--HIAKYLLRVTASDGK-FQTSVPVEVFVL--DINDNSPQCSQL---- 2992

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G           I+K+ A D D+  NA+ITYS++     G  +F++DP +G + T  
Sbjct: 2993 LYTGRVHEDVTPGHFILKVSAVDADMDTNAQITYSLH---GPGAQEFKLDPHTGELTTLT 3049

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  Y++  +ATD GG+S Q  V +  +   N  +P F  +   V V +  ++ +
Sbjct: 3050 ALDRERKDIYNLVAKATDGGGQSCQADVTLH-IEDVNDNAPRFFPSHCTVAVFDNTTVKT 3108

Query: 173  TVATI 177
             VA +
Sbjct: 3109 PVAVV 3113



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V + D+NDN P         RLP  + P+   AG     +  + A+D D G+N  ITY
Sbjct: 1218 VVVCILDVNDNPPMFSHKLFNVRLPERLSPLS--AGP----VYSLVASDPDEGLNGSITY 1271

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV--VP 146
            SI      G   FRIDP +G++ ++    AGE   +T++ATD+G  +  T V + +  +P
Sbjct: 1272 SIEESDEEG---FRIDPVTGLVSSSSTFAAGEYNILTIKATDSGQPALSTSVRLHIEWIP 1328

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  ++V
Sbjct: 1329 QPRPSSIPLSFDEPHYSFTVMETDPVNHMVGVVSV 1363



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P    IQ G E    + ++ ATD DLG N  +TY          
Sbjct: 2048 VSVEDVNDNVPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGTVTYGF----AEDY 2103

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G    QT VEV V    N  +P+FQ
Sbjct: 2104 AYFRIDPYVGDISLKKPFDYQALNKYHLKVIARDAGTPPLQTEVEVHVTVR-NKSNPLFQ 2162

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2163 SPYYKVKVPENIALYTPI 2180



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 12/172 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            + ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3059 YNLVAKATDGGGQSCQADVTLHIEDVNDNAPRFFPSHCTVAVFDNTTVKTPVAVVFARDP 3118

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTG---G 133
            D G NA++ YS+   +++   +F ID  SGVI  E   ++ +     +TVQA+D G    
Sbjct: 3119 DQGANAQVVYSL---TDSVDGQFSIDATSGVIRLEKPLQVRSNSAVELTVQASDLGIPIP 3175

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI-TVSRLAS 184
             S+   V VSVV G     P+F    +   V E A I++ V  + T++R  S
Sbjct: 3176 LSTLGTVTVSVV-GLEDYLPIFLNAEHSTQVPEDALIDTEVLHLATLTRPGS 3226



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 7/169 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDNAP+       + I
Sbjct: 2513 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 2570

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  +R   ++++ A D D G NA++TYS+  + +       ++P +GV++    L+  E
Sbjct: 2571 PSNVSRDSPVIQVLAYDADEGRNADVTYSVDSIEDLAEEIIEVNPTTGVVKVKESLVGLE 2630

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSE 166
              ++   ++A D G     ++V V +   PN    P F +  Y  + SE
Sbjct: 2631 NRAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEVPLPKFSEPLYTFSASE 2679



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ PR    +     ++       I+ + A D D  +N  ITYS+  V  
Sbjct: 3284 TIVVNVTDVNEHHPRFTHDLYTVRVLENAVVGDTILTVSAFDEDGPINNAITYSL--VGG 3341

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I+P+ G ++   K +  EQ   YS+ ++ATD+G        EV+V V   N  
Sbjct: 3342 NQLGHFTINPKKGKLQ-VAKALDWEQTPSYSLKLRATDSGQPPMHKDTEVAVEVVDVNDN 3400

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITV 179
             P F Q  Y   V E + I + V  + +
Sbjct: 3401 PPRFFQLNYSTAVQENSPIGNKVLQLIL 3428



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 2759 VSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 2818

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F +D  SG I T  +L    Q  Y   V A D G     SSQ +VEVS+    
Sbjct: 2819 GSNIHELFAVDNESGWITTLKELDCETQQIYHFYVVAFDHGQTIQLSSQALVEVSIT-DE 2877

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P F    Y  +V E +     VAT+
Sbjct: 2878 NDNPPRFASEDYRGSVVENSEPGELVATL 2906



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2247 TVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGKNQDVSYQIVEDGS 2306

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 FRI+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2307 DVSKFFRINGSTGEMFTIQELDYEAQQHFQVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2365

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F++  Y+ NVSE A+    V  +
Sbjct: 2366 PPEFREPQYEANVSELATCGHLVLKV 2391



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+++ D N + P    +      P     G    ++
Sbjct: 1508 PSQHILVVMVRDQEMPIKRNFVWVTIHVEDGNLHPPHFTQLHYEANVPDTTAPG---TEL 1564

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +++ A D D G NAE+ YS    ++     F ID   G I    KL  +   ++ +TV+A
Sbjct: 1565 LQVRAMDADRGANAEVHYSFLKGNSEDF--FNIDTLFGTITVAQKLDHVHHTKHMLTVKA 1622

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G      +  V +   P ++ +P+F ++ Y + + E   + S +  I+ +
Sbjct: 1623 EDQGSPRRHDLAMVVIRVHPSDSSAPIFSKDEYFIEIPESVPVGSPILLISAT 1675



 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)

Query: 8    NLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------RLPMIPP 58
            +LDR+  +  ++  +V AR++  +G        L V L D NDNAP       RL +  P
Sbjct: 870  HLDRE--SEPQYILKVEARDQPMKGHQLFSVTDLIVTLEDTNDNAPQCITEHSRLKV--P 925

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
              +  G     +  ++A+D DLG   E+ Y +   V  T    FR++P +G +    +L 
Sbjct: 926  EDLPLGTV---LTFLDASDPDLGPAGEVRYILVDDVHGT----FRVEPMTGALSLERELD 978

Query: 118  AGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASIN 171
               +  Y++++ A+D+G    + +   VEV V+    N  SP F    Y   V E +   
Sbjct: 979  FERRAGYNLSLWASDSGRPLARRTLCHVEVLVLDVNENLHSPHFSSFVYQGQVQENSPAG 1038

Query: 172  STVATIT 178
            + V  +T
Sbjct: 1039 TQVMVVT 1045



 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 11/172 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLN-DINDNAPRLPMIPPIQIQAGEARRQIVKIEAT 76
            K+  +VIAR+    A + P+   V ++  + + +  L   P  +++  E       I  T
Sbjct: 2128 KYHLKVIARD----AGTPPLQTEVEVHVTVRNKSNPLFQSPYYKVKVPENIALYTPILHT 2183

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-G 133
                     + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G
Sbjct: 2184 QARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALG 2241

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S+  VEV +V   N   P F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2242 SFSEATVEV-LVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 2292



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  ++YSI    +  +  F IDP  GVI TT  +   +    Y+  V
Sbjct: 477 VLTVTATDQDHGDNGCVSYSIV---SPKVVPFSIDPYLGVISTTKPMDYELMRRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++    V++ + A +  ++  ++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLKNLNDNQPMFEEVNCTVSLRQDAPVGKSIMAVS 587



 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 16/165 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLP--MIPPIQI 61
            E LD +  N   F+F V   + QGT    A  P  + +++ D+ND +PR    +     +
Sbjct: 1816 EELDYE--NTPLFQFNVYVHD-QGTPLLFAPRPAKVIIHVRDVNDFSPRFSEQIYEVAVV 1872

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                   +++ ++A D+D    +E+ YSI    NT    F I P +G I      + G  
Sbjct: 1873 GPTHPGMKLLTVQAKDDD----SEVIYSI-KTGNTD-EAFAIHPITGHISVVNPAVLGFS 1926

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              +T++A+D G      +V++S+    + +S  F Q+ Y   V E
Sbjct: 1927 RKLTIKASD-GLYQDTALVKISLTKVLD-KSLQFDQDIYRARVKE 1969



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG N+E  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDVPLKSPICKVTATDADLGQNSEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
                F I P SGV+    KL      +Y + VQA D   K S+
Sbjct: 189 ARSEVFAIHPTSGVVTVARKLNVTWRGKYELQVQAVDRMRKISE 232



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + DINDN P +  P+  P   +       ++++EA 
Sbjct: 1093 YWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPCMSRPVFYPCVQEDVPLGTSVLQLEAW 1152

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T+++   S   +  F I P +GV+ T  +L     +++ + V   D G  
Sbjct: 1153 DPDSSSQGKLTFNL--TSGNHMGYFVIHPFTGVLTTARQLDRENKDEHVLEVTVLDNGEP 1210

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
              ++   V V +   N   P+F    ++V + E  S
Sbjct: 1211 PLKSTSRVVVCILDVNDNPPMFSHKLFNVRLPERLS 1246



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTV + D NDN PR    PP   Q       E    I +++  D D   N  + YS+   
Sbjct: 796 LTVTVKDWNDNPPRF---PPGGYQLTISEDTEVGTTIAELKTKDADSEDNRRVRYSLL-- 850

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
             T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 851 --TPTEKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPMKGHQ 894



 Score = 36.6 bits (83), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQYS---I 124
            ++++++A D D G    + Y+I+   + G    F++DP SGV+ T G+L    Q S   +
Sbjct: 1456 ELLRVQAADQDNGKG--LIYTIHSSQDPGSASLFQLDPSSGVLVTVGRLDLHSQPSQHIL 1513

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             V   D      +  V V++ V   N   P F Q  Y+ NV +
Sbjct: 1514 VVMVRDQEMPIKRNFVWVTIHVEDGNLHPPHFTQLHYEANVPD 1556



 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
            A  Q++ + A D D G++ E+ Y +   + TGL  F I+  +G++ET   L       Y 
Sbjct: 1037 AGTQVMVVTAQDEDGGLDGELQYFLR--AGTGLEAFSINQDTGMLETLVPLDREFTPYYW 1094

Query: 124  ITVQATDTGGKSSQTIVEVSV 144
            +TV A D G      + EV +
Sbjct: 1095 LTVLAVDRGSVPLSAVTEVYI 1115


>gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
           Precursor
          Length = 798

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
            [Ornithorhynchus anatinus]
          Length = 4517

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 8/179 (4%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE 65
            E LDR+ P  G     V A +  G A    V + V   D NDNAP+   +     ++A  
Sbjct: 2552 EPLDRERPTEGDISIFVRAADGGGRATFCTVRVIVV--DENDNAPQFLTVEFRASVKADV 2609

Query: 66   ARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--IAGEQ 121
             R  +V +++A D D GVN+ ITYS+Y  ++  +     IDP +G + T G    +    
Sbjct: 2610 GRGHLVTQVQAVDPDDGVNSRITYSLYSEASVSVADLLEIDPDNGWMVTKGSFGQLRNTV 2669

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             S  V+A D G     ++V V + V  P+T  P F Q  Y   + E  +I STV ++ +
Sbjct: 2670 LSFFVKAVDGGIPVRHSLVPVYIHVLPPDTLLPSFSQPQYSFTIPEDTAIGSTVDSLRI 2728



 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN+P    +    +   +  + + I+KI A D D+G N +I+YS+Y    +G 
Sbjct: 3013 VTVSDVNDNSPVCDQVAYTALIPEDIPSNKLILKISAKDPDVGSNGDISYSLY---GSGN 3069

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            +KF +DP SG ++T   L+  E+   Y++ V+ATD GG+  Q+ V + ++   N   PVF
Sbjct: 3070 NKFFLDPESGELKTLA-LLDREKIPVYNLIVRATDGGGRFCQSEVHL-ILEDVNDNPPVF 3127

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y   V E  +  + +  +
Sbjct: 3128 SSDHYSACVYENTATKALLTRV 3149



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1234 VWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1293 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1351 PSPTPLTFDEPFYNFTVMESDKVTEIVGVVSV 1382



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 16/149 (10%)

Query: 37   VSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V + V + DINDN P    LP    +Q+ A E    I ++ A D D G N ++TY +   
Sbjct: 2064 VIVRVTVEDINDNTPVFVGLPYYAAVQVDA-EPGTSIYRVTAIDRDKGANGDVTYLL--- 2119

Query: 94   SNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVE--VSVVPGP 148
               G   F IDP SG +   E     ++  +YS+ V A D G  S  + VE  +++V   
Sbjct: 2120 -REGYGHFEIDPSSGDVTLREAFDSDLSNIEYSVVVLARDGGSPSLSSSVEFPITIV--- 2175

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   PVF +  Y  +VSE   +++ V  I
Sbjct: 2176 NKAMPVFDRPFYTASVSEDVEMHTPVLGI 2204



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    V+ R+++         + V++ D ND++P    P+    
Sbjct: 1513 VLYTAERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIVSVEDANDHSPYFTSPLYEAS 1570

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  + 
Sbjct: 1571 MFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPILGIITLSKEPDVT 1628

Query: 118  AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ TD G    S+  IV +SV    N+  P F    Y   V+E   + ++V 
Sbjct: 1629 AMGQFVLSVKVTDQGSPSLSATAIVRISVTLSDNSH-PKFAHKDYQAEVNENVDVGTSVI 1687

Query: 176  TIT 178
             I+
Sbjct: 1688 LIS 1690



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 17/156 (10%)

Query: 32   AASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            A S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G NAE
Sbjct: 3211 ALSSFATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTNAE 3266

Query: 86   ITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEV 142
            ITY I   +  G  KFRI+ R+G   VIE     +  + Y + V+A D G  +   +  V
Sbjct: 3267 ITYLIRSGNERG--KFRINSRTGEISVIEELDYELCKDFY-LVVEAADGGTPALSAVATV 3323

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V +   N  +P F Q  Y   +SE AS+  +V  +
Sbjct: 3324 NVNLTDVNDNAPQFNQEVYSAVISEDASVGDSVVLL 3359



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1095 VIYTADVLDRE--TTGSYWLTVYAADRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPM 1152

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D G N ++TY I   S    + F ++ ++GVI TT + +  
Sbjct: 1153 VMENSPKDVSVIQIQAQDPDSGSNEKLTYRI--TSGNPQNFFAMNFKTGVITTTSRKLDR 1210

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ V V V V   N   P F +  Y + + E
Sbjct: 1211 EQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPE 1261



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I+++EATD D     +++YS++  + +  + K
Sbjct: 1448 DNNDNGPEFSH-PSYDVTISEDVPPDTEILQVEATDRD--EKHKLSYSLHSSIDSVSMRK 1504

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V V V   N  SP F  
Sbjct: 1505 FRIDPGTGVLYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVSVEDANDHSPYFTS 1564

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ ++ E A++ S V  +T
Sbjct: 1565 PLYEASMFESAALGSAVLQVT 1585



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +I R   G        + + L D+NDN P            +    +  + +++ATD 
Sbjct: 3095 YNLIVRATDGGGRFCQSEVHLILEDVNDNPPVFSSDHYSACVYENTATKALLTRVQATDP 3154

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+GVN ++ YS+   +N     F ID  SG+I     L    Q  Y+I+V+A+D      
Sbjct: 3155 DVGVNRKVVYSLADSANG---YFSIDRSSGIIILEQPLDREVQSSYNISVKASDQSVALA 3211

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS   V ++V+   N   PVF++  Y V V E  S  + V  +
Sbjct: 3212 LSSFATVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3254



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 45   DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL---- 98
            D+NDN P         I ++   A  ++++++A D D G N ++TY++Y  S+T L    
Sbjct: 2802 DLNDNKPAFDASSYDAIVMEGMPAGTKLIQVKAEDPDWGANGQVTYALY--SDTDLPGVT 2859

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSV-VPGPNTRSPV 154
              F ID  SG I T   L   A   ++  V A+D G   S      V+V V   N  +P 
Sbjct: 2860 QAFGIDSNSGWISTLRDLDHEADPMFTFAVVASDLGEAVSLSATASVAVTVTDVNDNAPA 2919

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F    Y  +V E       VA ++
Sbjct: 2920 FAHEVYRGHVKESDPPGEVVAVLS 2943



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV+L D ND+ P    P       ++      IV + A+D D G N  ITYSI   ++ 
Sbjct: 454 VTVHLEDANDHIPEFGEPSYEAFVNESVPVGTSIVAVSASDRDKGENGYITYSI---ASL 510

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
            +  F I+  +GVI T+ +L    A E Y   V+A+D G     +T V V++  G  N  
Sbjct: 511 NVLPFSINQFTGVISTSEELDFESAPESYRFFVRASDWGSPYRHETEVNVTIRVGNVNDN 570

Query: 152 SPVFQQ 157
           SP+F++
Sbjct: 571 SPLFEK 576



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A+D D G N ++ ++I   +  G  +F ID  +G +     L     + Y + + 
Sbjct: 741 ILKIQASDADAGFNGKVVFTISDGNTDG--RFAIDLETGQLRVLMPLDREQTDLYLLNIT 798

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   +SS  ++ V+V    + R PVF Q +Y VNV E + I + +  +
Sbjct: 799 IYDLGKPQRSSWRLLTVNVEDANDNR-PVFLQESYSVNVLESSGIGTEIIQV 849



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 47   NDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            NDNAP    P       +A      ++++ A+D D   N  + Y I   +      F ID
Sbjct: 2277 NDNAPVFDQPSYSATLSEASLIGTPVLQVVASDADSESNRLVQYQIVQDTFNSTDYFHID 2336

Query: 105  PRSGVIETTGKLIAGE---QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
              SG+I  T +L+  E   + ++ V+ATD+G    SS+ +V +  V   N   PVF Q  
Sbjct: 2337 SSSGLI-LTARLLDHESVQRSTLKVRATDSGFPPLSSEVLVTI-FVTDTNDNPPVFNQLI 2394

Query: 160  YDVNVSEGASINSTVATI 177
            Y+  VSE A  N  V  +
Sbjct: 2395 YESYVSELAPRNHFVTCV 2412



 Score = 42.7 bits (99), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 13/138 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPR-LPMIP 57
            +V   + LDR+  +   +  ++ AR+K  ++    SV V+L V L+D+ND  P  +P   
Sbjct: 881  VVYVADQLDRE--SKANYSLKIEARDKAESSQQQFSV-VTLRVFLDDVNDCPPAFIPSSS 937

Query: 58   PIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I    +L
Sbjct: 938  SVKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLNREL 994

Query: 117  IAGEQ--YSITVQATDTG 132
               +Q  Y++TV+A D G
Sbjct: 995  DYEKQQFYNLTVRAKDKG 1012



 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           LTVN+ D NDN P   +     +   E+     +I+++EA D D G N  + YS+     
Sbjct: 813 LTVNVEDANDNRPVF-LQESYSVNVLESSGIGTEIIQVEARDRDRGPNGTVGYSVL---- 867

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   +F I+  +GV+    +L   +   YS+ ++A D    S Q    V++   +   N 
Sbjct: 868 TDTRQFAINSSTGVVYVADQLDRESKANYSLKIEARDKAESSQQQFSVVTLRVFLDDVND 927

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATI 177
             P F  ++  V V E   + + +A +
Sbjct: 928 CPPAFIPSSSSVKVLEDLPVGTVIAWL 954



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDN 78
           F ++    +G        + V + D+ND  P   P    + I ++   R  I ++ ATD 
Sbjct: 122 FLMVKGSVRGEDLEAWTKVNVQVLDMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDA 181

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           D+G N E  Y  Y  +   L  F + P SG+I  +G+L   E+  Y + V A D G K
Sbjct: 182 DIGSNGEFYY--YFKNKVDL--FSVHPTSGIISLSGRLNFDEKNRYDLEVLAVDRGMK 235



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 17   GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
             +F F V  R+    Q TA S PV +TV++ D+NDN P     +   + +       +++
Sbjct: 1841 ARFHFHVHVRDSGSPQLTAES-PVEVTVDVTDVNDNPPVFSPAVFESVLLLPTYVGVEVL 1899

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            K+ ATD D  V +E+TYS+       L  F ID  SGV+      ++ + Y +  + +D 
Sbjct: 1900 KVSATDPDSEVPSELTYSLME---GHLDHFLIDSHSGVLTVKNNSLSRDHYVLIARVSD- 1955

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             GK   T     +V         F Q+ Y  +++E ++  + VA +
Sbjct: 1956 -GKFHSTATVTLLVKEALDSGLHFTQSFYSTSIAENSTNITKVAIV 2000



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI T  + +  E+   Y + VQAT+  G +S   V + VV   N  +PVF  
Sbjct: 1710 FVINPYSGVI-TNQRALDYERTASYQLIVQATNMAGMASNATVNIQVV-DENDNAPVFLF 1767

Query: 158  NTYDVNVSEGASINSTV 174
            + Y  ++SE A +NS V
Sbjct: 1768 SQYSGSLSEAAPVNSVV 1784



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 17/125 (13%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + E+ YSI     +GL +F ID  +GVI        ETTG       
Sbjct: 1058 VLQVTARDEDSGRDGEVQYSIR--DGSGLGRFNIDEETGVIYTADVLDRETTGS------ 1109

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +TV A D G     + +EV + V   N  +P+  +  Y   V E +  + +V  I   
Sbjct: 1110 YWLTVYAADRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPMVMENSPKDVSVIQIQAQ 1169

Query: 181  RLASG 185
               SG
Sbjct: 1170 DPDSG 1174



 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +T+ + D NDN P    +I    +     R   V  ++A+D D   +  + Y I  +S
Sbjct: 2374 VLVTIFVTDTNDNPPVFNQLIYESYVSELAPRNHFVTCVQASDADSSDSDRLEYGI--LS 2431

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F +D +SGVI  +   +   +  YS+ V  +D G  +S   V V V+ G N  S
Sbjct: 2432 GNDRTSFLMDGQSGVITLSNHRMQRMEPLYSLNVSVSD-GLFTSTAQVHVRVL-GANLNS 2489

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF QN Y   V E A+  + V  +
Sbjct: 2490 PVFSQNVYVAEVRENAAPGTKVVHV 2514


>gi|195117890|ref|XP_002003478.1| GI22290 [Drosophila mojavensis]
 gi|193914053|gb|EDW12920.1| GI22290 [Drosophila mojavensis]
          Length = 5133

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 3624 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGVYFGNVTENGT 3683

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 3684 AGSPVMTMSAIDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 3743

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 3744 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWFTEVDETNGTYIPETP 3802

Query: 174  VATITV 179
            + T+TV
Sbjct: 3803 ILTVTV 3808



 Score = 40.8 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 12   DPPNPGKFRFQVIAREKQGTAAS---VPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            DP     FRF++   +K    A    V  S + V L DINDN PR      I++   E  
Sbjct: 3854 DPLQSSGFRFRIQVNDKGEDGADKYHVAYSWVVVKLRDINDNVPRFDR-DHIEVSIYEDT 3912

Query: 68   RQIVKIE---ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYS 123
            +    +E   A+D D G ++ ++Y I   SN    +F I  +  + I+      A +++ 
Sbjct: 3913 KVGTVLEQFRASDADQGGHSRVSYKIVRASNR-RRQFAISDKGAISIQRPLDREAADRHH 3971

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            + + A+D G         ++V V   N  +P   Q+ Y   + E  S
Sbjct: 3972 VQILASDDGNPPRTATATLTVIVKDVNDNAPTLAQD-YKPTLPENVS 4017



 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 12/97 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  +   Q++A +      +   +LTV + D+NDNAP L       +    + R
Sbjct: 3962 LDREAAD--RHHVQILASDDGNPPRTATATLTVIVKDVNDNAPTLAQDYKPTLPENVSPR 4019

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP 105
            +I+++ A D D               N G   FR+DP
Sbjct: 4020 KIIEVAAKDAD----------DRQRGNGGPFSFRLDP 4046


>gi|9256576|ref|NP_061725.1| protocadherin alpha-11 isoform 1 precursor [Homo sapiens]
 gi|13878432|sp|Q9Y5I1.1|PCDAB_HUMAN RecName: Full=Protocadherin alpha-11; Short=PCDH-alpha-11; Flags:
           Precursor
 gi|5456900|gb|AAD43701.1| protocadherin alpha 11 [Homo sapiens]
 gi|12274864|emb|CAC22256.1| protocadherin alpha 11 [Homo sapiens]
 gi|119582407|gb|EAW62003.1| hCG1982192, isoform CRA_r [Homo sapiens]
 gi|168275850|dbj|BAG10645.1| protocadherin alpha 11 precursor [synthetic construct]
          Length = 949

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P        + +    A+  +V K+ ATD D GVN E+TYS+  + 
Sbjct: 226 VRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G H F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 286 PNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  ++ +A I+VS   SG
Sbjct: 345 NSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSG 379



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 19/112 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
            +FQV AR+      S  V+L V + D NDNAP L     +  QAG A            
Sbjct: 530 LQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584

Query: 68  ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
                + K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRAL 636



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++  A +    I  I  
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++         Y + V A D G  
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRENVWAYELVVTARDGGSP 432

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465


>gi|426257895|ref|XP_004022557.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Ovis aries]
          Length = 1307

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V V   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V A++    + S    +T+N+ D+NDN P            ++PP    +      
Sbjct: 639 YTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVPP----SASPGTV 694

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           +  + A DND G+NAE+ Y+I   +  GL  F ID  +G I    K +  +   + + V+
Sbjct: 695 VFTVVAIDNDTGMNAELRYNIVGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVK 752

Query: 128 ATDTGGKSS 136
           A D G   S
Sbjct: 753 AKDLGQPDS 761



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVLLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271


>gi|297492717|ref|XP_002699808.1| PREDICTED: protocadherin-11 X-linked isoform 1 [Bos taurus]
 gi|296471043|tpg|DAA13158.1| TPA: protocadherin 11 Y-linked isoform 1 [Bos taurus]
          Length = 1344

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF  N Y+  V E    + TV  ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEAR--RQIVK 72
           + F V A +    + S    +T+N+ D+NDN P   ++PP     ++ +  A     +  
Sbjct: 639 YTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSFELVSPSANPGTVVFT 697

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +  +   + + V+A D
Sbjct: 698 VVAIDNDTGMNAELRYSILGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVKAKD 755

Query: 131 TGGKSS 136
            G   S
Sbjct: 756 LGQPDS 761



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|351705185|gb|EHB08104.1| Protocadherin Fat 4, partial [Heterocephalus glaber]
          Length = 3672

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 12/165 (7%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARR-QIVKIEATDNDLGVNA 84
           E+ GT     + L V + D+NDN P    +   +++    A+   ++K+ ATD D G+N 
Sbjct: 190 ERTGT-----IQLFVQVLDVNDNDPEFDQLEYKVRLVENAAKEILVIKLNATDRDEGLNG 244

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIV 140
           E+TYS+  +  +G   F +D  +G +   G L   E   Y I VQATD G    +   IV
Sbjct: 245 EVTYSLKSIKPSGRPFFTLDGNNGEVRVNGTLDYEENKFYEIEVQATDKGTPPMAGHCIV 304

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V ++   N  SP     +  + V E A  ++ +A I+VS L SG
Sbjct: 305 WVEIL-DINDNSPQVTVTSLSLPVLEDAQTSTVIALISVSDLDSG 348



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ-IVKIEATDNDLGVNAE 85
            K GTA      + V + D+ND+ P+   ++   Q+    A    +V + ATD D G N E
Sbjct: 2466 KSGTA-----HIRVVVLDVNDHVPQFSRLVYRAQVPENSANGSFVVMVTATDLDEGTNKE 2520

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
            I YS+     T L  F+ID ++G +   G L   + E Y I +QATD GG S+ + V V 
Sbjct: 2521 IIYSLSQNPETILQTFQIDSQTGEVRLRGPLDFESIETYDIDIQATDGGGLSAHSKVLVE 2580

Query: 144  VV 145
            VV
Sbjct: 2581 VV 2582



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 8/156 (5%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-V 93
            V L + + D+NDNAP     +  +++        +V K+ ATD D G NA+I YS    +
Sbjct: 1170 VQLLIRILDVNDNAPEFDQFVYKVRVLENALNGTLVIKLNATDPDDGTNADIVYSFRRPI 1229

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPN 149
            S   ++ F I+P SG I    KL   E   Y I+V+A D G    +S   + V VV   N
Sbjct: 1230 SPAVVYAFNINPESGEIRIKDKLDFEENKFYEISVEAVDKGNIPMTSHCTLLVEVV-DIN 1288

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +P     +  + V E    ++ +A ++VS   SG
Sbjct: 1289 DNAPEVTITSLSLPVREDTQPSALIALLSVSDRDSG 1324



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 13/160 (8%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-----ARRQIVKIEATDNDLGVNAE 85
            T  ++ +++ V + DINDN+PR P  P  Q+Q  E     AR  I    A D D+G N+ 
Sbjct: 1813 TQRTLTIAVEVEILDINDNSPRFPR-PDYQLQVSESVAPGARFHIES--AQDPDVGTNSV 1869

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIE-TTGKLIAGEQ---YSITVQATDTGGKSSQTIVE 141
             TY +    +  L    +   S V+E    K +  EQ   + + + A D G  +     +
Sbjct: 1870 QTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGSPAHSGTAQ 1929

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +SV V   N  SP F Q+TY V + E A   + V  +  S
Sbjct: 1930 ISVRVLDTNDNSPAFDQSTYRVQLREDAPPGTLVVKLNAS 1969



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 26/167 (15%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
             +FQV AR+    A    V+L V + D NDNAP L  +P     AG    ++V       
Sbjct: 1475 LQFQVSARDSGVPALGSNVTLQVFVLDENDNAPALLGLP-----AGSTVHELVSRSVGAG 1529

Query: 72   ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-QYSITV 126
                K+ A D D G NA +++ +    +     F +   +G I TT  L   + Q    +
Sbjct: 1530 HVLAKVRAVDADSGYNAWLSFELQSAVDGQRSPFSVGLYTGEISTTRTLDETDAQRQRLI 1589

Query: 127  QATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            +A D+G     G +  T++ V      N  SPVF+++ Y   V E A
Sbjct: 1590 KALDSGLPTLSGHTQVTVIMVDT----NDNSPVFERSVYCTKVPETA 1632



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 12/191 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V ++ LDR+          + A +    A S    ++V + D NDN+P        ++Q
Sbjct: 1896 LVLRKGLDRE--QAALHHLVLTAVDGGSPAHSGTAQISVRVLDTNDNSPAFDQ-STYRVQ 1952

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              E       +VK+ A+D D G N E+ YS+  + S+     F ID  +G +  +G L  
Sbjct: 1953 LREDAPPGTLVVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDANTGEVRVSGALDY 2012

Query: 119  GE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E   Y I VQATD G    +    V+V +V   +    V   + Y   V E AS N+ V
Sbjct: 2013 EEASSYQIYVQATDRGPVPMAGHCKVQVDIVDVNDNAPEVVLTDLYS-PVPEDASPNTVV 2071

Query: 175  ATITVSRLASG 185
            A ++V+   SG
Sbjct: 2072 ALLSVNDQDSG 2082



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 7/164 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
            +   V A +K     +   +L V + DINDNAP + +     P++ +  +    I  +  
Sbjct: 1260 YEISVEAVDKGNIPMTSHCTLLVEVVDINDNAPEVTITSLSLPVR-EDTQPSALIALLSV 1318

Query: 76   TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
            +D D GVN ++T S+  H+    +  F+ +  S V+++T    +   Y + V A D G  
Sbjct: 1319 SDRDSGVNGKVTCSLTPHIPFKLVSTFK-NYYSLVLDSTLDRESTSHYEVVVTARDRGSP 1377

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S      VSV V     R+PVF Q  Y V V E     S + T+
Sbjct: 1378 SLWATATVSVEVADGRKRAPVFAQPEYTVFVKENNPPGSHIFTV 1421



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 11/123 (8%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA 84
            + GTA  V     + + DINDNAP    +   ++Q  E      Q+  + A D D+G   
Sbjct: 2901 RSGTALVV-----IEVLDINDNAPEFTQLL-YEVQVPENCPVGSQVATVSARDLDIGTYG 2954

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEV 142
            +I+Y+    S      F+I+  SG +    KL   + + Y++ +QA D GG S   +V +
Sbjct: 2955 QISYAFSQASEDIRKTFQINANSGELLLKQKLDYESVQTYTVNIQAIDGGGLSESCVVFI 3014

Query: 143  SVV 145
             V+
Sbjct: 3015 QVM 3017



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 8/148 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V  + LDR+     ++   ++A +      S  V + + + D+NDNAP   +  P ++Q
Sbjct: 3307 LVQDKPLDRE--EQAEYSLSLMALDGGSPPRSGSVMVQILIMDVNDNAPEF-VHTPYEVQ 3363

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              E       I+ + A D D G    ++Y ++  S+     F I+  +G I    KL   
Sbjct: 3364 VLENCPLNSPILGVSARDMDAGNFGSVSYGLFQPSDEIKQTFSINEVTGEIRLKKKLDFE 3423

Query: 120  --EQYSITVQATDTGGKSSQTIVEVSVV 145
              + Y + ++ATD GG S +  V + VV
Sbjct: 3424 KIKSYHVEIEATDGGGLSGKGTVVMEVV 3451



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 30/159 (18%)

Query: 18   KFR--FQVIAREKQGTAASVPVSLTVNLN----DINDNAPR------------LPMIPPI 59
            KFR  F  +  + +GT    P+S TV  N    D+ND+AP             + M+P  
Sbjct: 2228 KFREFFVTVEAQDKGTP---PLSSTVTANMYVVDMNDHAPHILYPTSTNSSAAIEMVP-- 2282

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--I 117
              +   A   + K+ A D+D G NA + Y +   S+  L  F+++  +G I TT K+   
Sbjct: 2283 --RTAPAGYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDL--FKVELHTGEIRTTRKIGDE 2338

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
            +G  +++TV   D G       V ++V V   N  +P+F
Sbjct: 2339 SGTTFNLTVVVRDNGEPPLSASVAITVAVFDINDNAPIF 2377



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIE-AT 76
            F   V+ R+      S  V++TV + DINDNAP  L   P ++I           ++ A 
Sbjct: 2343 FNLTVVVRDNGEPPLSASVAITVAVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQ 2402

Query: 77   DNDLGVNAEITYSIYHVSNTGLH-KFRID-PRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            D D+G+N    Y++   +   LH +FR   P+   +     L   EQ   ++T+ A D G
Sbjct: 2403 DLDVGLNGLQNYTLSPNAYFHLHTRFRSHGPKYAELVLDKPLDREEQSEVNLTITAVDGG 2462

Query: 133  G--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
               KS    + V VV   N   P F +  Y   V E ++  S V  +T + L  G    N
Sbjct: 2463 SPPKSGTAHIRV-VVLDVNDHVPQFSRLVYRAQVPENSANGSFVVMVTATDLDEGT---N 2518

Query: 191  KE 192
            KE
Sbjct: 2519 KE 2520



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 45   DINDNAPRLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSI-----YHVSNTGL 98
            D+NDNAP L +   I +    +   +V I +  D D G NA++  SI     + +  T  
Sbjct: 3452 DVNDNAPELTVTSLISLIPENSPETVVSIFKIRDRDSGDNAKMICSIPDNLPFILKQTFK 3511

Query: 99   HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            + + ++  S +   T       +YSIT+  TD G    +T   ++V V   N  +P F Q
Sbjct: 3512 NFYTLETESPLDRETRS-----EYSITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQ 3566

Query: 158  NTYDVNVSEGASINSTVATITVSRLASG 185
             +Y + V E  S    + TI+ +   SG
Sbjct: 3567 TSYTLWVPENNSPALHIGTISATDRDSG 3594



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 41/193 (21%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP------IQIQAGEARRQIVK 72
            F F+V A ++   A S    + V + D NDNAP + + PP      ++I        +  
Sbjct: 3208 FEFRVGAADRGSPALSSEALVRVRVLDANDNAPFV-LYPPHNAEVLLKIPENSQPGTVFP 3266

Query: 73   IE-ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----------- 120
            ++ A D D+G N             GLHK+ + P S     T     G+           
Sbjct: 3267 LKLAEDLDVGSN-------------GLHKYTVSPNSHFHVLTRNHSEGKKFPDLVQDKPL 3313

Query: 121  ------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                  +YS+++ A D G   +S   +V++ ++   N  +P F    Y+V V E   +NS
Sbjct: 3314 DREEQAEYSLSLMALDGGSPPRSGSVMVQILIM-DVNDNAPEFVHTPYEVQVLENCPLNS 3372

Query: 173  TVATITVSRLASG 185
             +  ++   + +G
Sbjct: 3373 PILGVSARDMDAG 3385



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 28/151 (18%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
            V + DINDN+P  P          E+ R I+  E            A+D D+GVN+ +TY
Sbjct: 1065 VEVKDINDNSPVFP----------ESNRSIIIAESRPLESRFPLDGASDADIGVNSALTY 1114

Query: 89   SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
             +    Y   +T   + ++   S V+  T      +++S+ +  TD G       V++ +
Sbjct: 1115 RLDPNDYFTLDTQNSREQMSLLSLVLRKTLDREEIQEHSLLLTVTDGGKPELTGTVQLLI 1174

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +   N  +P F Q  Y V V E A +N T+
Sbjct: 1175 RILDVNDNAPEFDQFVYKVRVLENA-LNGTL 1204



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 7/164 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEA 75
           ++ QV A ++     +   ++ V + D+NDNAP+L  +  + +   E  +    I  I  
Sbjct: 717 YKIQVEAVDQGFLPLAGHCTVLVEVLDVNDNAPQL-TVTSLSLPVSEDMQPGTVITLIRV 775

Query: 76  TDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
            D D G+N ++T S+  HV    +  F+ +  S V+ +     +  +Y + V   D G  
Sbjct: 776 FDRDSGINGKVTCSLSSHVPFKLVSTFK-NYYSLVLSSALDRESVSEYKVVVTVQDGGSP 834

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +    VSV V   N  +PVF Q  Y V V E     S + T+
Sbjct: 835 PLRATATVSVEVADVNDNAPVFAQPEYTVFVKENNLPGSHIFTV 878



 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 25/156 (16%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            +TV + D NDN+P         ++P   P       +   + +++A+D D G N E+ YS
Sbjct: 1605 VTVIMVDTNDNSPVFERSVYCTKVPETAP-------SGTVLFQVQASDPDEGSNGEVWYS 1657

Query: 90   IYHVSNTGL-HKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTG----GKSSQTIVEVS 143
            + + +   L H F + P+SG ++    L A E      ++  D G      +++ +VEV+
Sbjct: 1658 LSNSTRAELRHLFHVHPKSGEVQVAASLGAPEVLLEAYIEVRDEGAFGLASTAKLLVEVT 1717

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             V   N  +P     T    V E A+  + +A ++V
Sbjct: 1718 DV---NDHAPEVNFMTLSSPVPEDAAPGTVIALLSV 1750



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 20/182 (10%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----------IQAGEARRQI 70
            FQ + +   G   S+   +TV +  ++DN  R  ++ P+Q           ++ E    +
Sbjct: 2773 FQFVVKATDGGLLSLSSQVTVRVIVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEPGYLV 2832

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE--TTGKLIAGEQ---YSIT 125
             K+ A D D G N+   Y+I    N   H    D   G++      K +  E+     +T
Sbjct: 2833 TKVVAVDGDSGSNSLQNYTIS--PNFYFHLKLQDSPQGLLPQLVLDKALDREEQPEIRLT 2890

Query: 126  VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            + A D G   +S   +V + V+   N  +P F Q  Y+V V E   + S VAT++   L 
Sbjct: 2891 LTALDGGTPPRSGTALVVIEVL-DINDNAPEFTQLLYEVQVPENCPVGSQVATVSARDLD 2949

Query: 184  SG 185
             G
Sbjct: 2950 IG 2951



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 41  VNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-----YH 92
           V + DINDN+P++ +     P+ ++  +    I  I  +D D GVN ++T S+     + 
Sbjct: 306 VEILDINDNSPQVTVTSLSLPV-LEDAQTSTVIALISVSDLDSGVNGQVTCSLTSDVPFK 364

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
           + +T  + + +     V+++     +   Y + V A D G  S      VSV V   N  
Sbjct: 365 IVSTFKNYYSL-----VLDSNLDRESVSNYEVVVTAKDGGSPSLWATATVSVEVADVNDN 419

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +PVF Q  Y V V E     S + T+
Sbjct: 420 APVFAQPEYTVFVKENNPPGSHIFTV 445



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 64/158 (40%), Gaps = 12/158 (7%)

Query: 37  VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHV 93
           V L + + D NDNAP     +     ++       ++   A+D D GVN +ITYS    V
Sbjct: 627 VQLLITVLDANDNAPVFDRTLYTVKLLENVSPGTLVIHANASDADEGVNGDITYSFSSDV 686

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG----GKSSQTIVEVSVVPG 147
                 KF ID  SG I   G +   E   Y I V+A D G          +VEV  V  
Sbjct: 687 PPDIKSKFHIDAVSGEITVIGVIDFEESKAYKIQVEAVDQGFLPLAGHCTVLVEVLDV-- 744

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P     +  + VSE     + +  I V    SG
Sbjct: 745 -NDNAPQLTVTSLSLPVSEDMQPGTVITLIRVFDRDSG 781



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 27/168 (16%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            Y +V+  +LDR+  +   +   ++A +      S    + V ++DINDN       PP+ 
Sbjct: 2647 YSLVTDRSLDRE--DVSGYNITLVAMDTAPPNLSAETVIEVLISDINDN-------PPV- 2696

Query: 61   IQAGE----ARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKF---RIDPRS 107
             Q G      R        I K+ A D DLG NA++TYS+    +  L  F    I+  +
Sbjct: 2697 FQEGSYILTVRENNSPAIFIGKVHAEDLDLGENAQVTYSLLPPKSGDLSVFAYISINSDN 2756

Query: 108  GVIET--TGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
            G +    T    A + +   V+ATD G    SSQ  V V V+   + R
Sbjct: 2757 GKLYALRTMDYEAIQNFQFVVKATDGGLLSLSSQVTVRVIVLDDNDNR 2804



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 15/166 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IV 71
             +FQV AR+    A    V+L V + D NDNAP L + PP      E   +       + 
Sbjct: 932  LQFQVSARDSGVPALGSNVTLQVFVLDENDNAPLL-LGPPTGGIVSELLSRSVGVGHVVA 990

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQ 127
            K+ A D D G NA +++ +   S +G+    ++ ++G++    ++    + G     ++ 
Sbjct: 991  KVRAVDADSGYNAWLSFELQD-SASGVRSPFLNLQNGILFVNSRIDREELCGRSAECSIH 1049

Query: 128  ATDTGGKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                  +  Q   VEV  V   N  SPVF ++   + ++E   + S
Sbjct: 1050 LEVIVDRPLQVFHVEVE-VKDINDNSPVFPESNRSIIIAESRPLES 1094



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)

Query: 19  FRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPM----IPPIQIQAGEARRQIVKI 73
            +FQV AR+       + V  + V + DINDN P  P     +   +++  ++R  +   
Sbjct: 499 LQFQVSARDSGTFWRPLQVFHVEVEVKDINDNPPVFPATQKNLFIAELRPLDSRFPLEG- 557

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--------AGEQYSIT 125
            A+D D+G NA +T   Y +S +      I P    ++  G ++        A E Y + 
Sbjct: 558 -ASDADVGANALLT---YRLSPSEYFSLDIPPNHEQVKPLGLVLRKPLDREEAPEIY-LL 612

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
           + ATD G       V++ + V   N  +PVF +  Y V + E  S
Sbjct: 613 LTATDGGKPELTGTVQLLITVLDANDNAPVFDRTLYTVKLLENVS 657


>gi|301608213|ref|XP_002933685.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
           tropicalis]
          Length = 801

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D NDN P        Q+   E       +++++ATD+D G NA+ITYS  H+S  G   F
Sbjct: 224 DANDNYPAFSQ-DTYQVTLSENAPDGFLVIQLQATDDDDGSNAQITYSFSHISEKGDQIF 282

Query: 102 RIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           +I+  +G I+  G L     + Y ITV+A D GG  S   V V V+   N  +P  Q N+
Sbjct: 283 QINTENGEIKKIGALDYEVTKNYKITVEAKDGGGLFSYCEVSVQVIDA-NDNTPEIQINS 341

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
           +   + E +   + +A I +  L SG
Sbjct: 342 FLSVIPEDSPPETVIALINIHDLDSG 367



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 21/149 (14%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-------------PMIPPIQIQAG 64
           +F+FQV+A++    + S   ++ V + D NDN+P++              +IP     + 
Sbjct: 517 EFQFQVMAKDSGIPSLSSNATIRVCITDKNDNSPKILYPSSDTEGTAVYELIP----HSS 572

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQY 122
           E    + K+ A D D G N+ ++Y +  V +  +  F I   +G I  T         + 
Sbjct: 573 EKGYLVTKVIAVDADSGHNSWLSYHLIQVQDPSI--FTIGQYTGEIRLTRDFQETDSSRQ 630

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            I V   D G  S    V ++++   N +
Sbjct: 631 KIVVMVKDNGEPSLSATVTLNLLIAENFQ 659


>gi|426257899|ref|XP_004022559.1| PREDICTED: protocadherin-11 X-linked-like isoform 4 [Ovis aries]
          Length = 1336

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V V   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V A++    + S    +T+N+ D+NDN P            ++PP    +      
Sbjct: 639 YTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVPP----SASPGTV 694

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           +  + A DND G+NAE+ Y+I   +  GL  F ID  +G I    K +  +   + + V+
Sbjct: 695 VFTVVAIDNDTGMNAELRYNIVGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVK 752

Query: 128 ATDTGGKSS 136
           A D G   S
Sbjct: 753 AKDLGQPDS 761



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVLLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|11036654|ref|NP_061756.1| protocadherin beta-13 precursor [Homo sapiens]
 gi|13431381|sp|Q9Y5F0.1|PCDBD_HUMAN RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
           Precursor
 gi|5457033|gb|AAD43753.1|AF152492_1 protocadherin beta 13 [Homo sapiens]
 gi|14009455|gb|AAK51613.1|AF217745_1 protocadherin-beta13 [Homo sapiens]
 gi|21620005|gb|AAH33068.1| Protocadherin beta 13 [Homo sapiens]
 gi|30411001|gb|AAH51348.1| Protocadherin beta 13 [Homo sapiens]
 gi|37181979|gb|AAQ88793.1| PCDHB13 [Homo sapiens]
 gi|47939613|gb|AAH71934.1| Protocadherin beta 13 [Homo sapiens]
 gi|119582374|gb|EAW61970.1| protocadherin beta 13 [Homo sapiens]
          Length = 798

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377



 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
           +++TV + D+NDNAP            +       I  + ATD D G NA++TYS+    
Sbjct: 435 LNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQ 494

Query: 92  --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
             H+  T L     D        +    A + +   V A+D G    SS+ +V V VV  
Sbjct: 495 DPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRV-VVLD 553

Query: 148 PNTRSPV 154
            N  SP 
Sbjct: 554 ANDNSPF 560


>gi|344243496|gb|EGV99599.1| Protocadherin Fat 3 [Cricetulus griseus]
          Length = 2774

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+  NP +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 1331 IITTERLDRE--NPLEGDISIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 1388

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    +
Sbjct: 1389 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 1448

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                 S  V+A D G     +++ V + V  P T  P F Q+ Y   ++E  +I STV T
Sbjct: 1449 KNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTIAEDTAIGSTVDT 1508

Query: 177  ITV 179
            + +
Sbjct: 1509 LRI 1511



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 11/183 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 296 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEAS 353

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
             ++      ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  + 
Sbjct: 354 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMT 411

Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           A  Q+ ++V+ATD G    S+  IV VS+    N+  P F    Y   V+E   I ++V 
Sbjct: 412 AMGQFVLSVKATDQGSPPMSATAIVRVSISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 470

Query: 176 TIT 178
            I+
Sbjct: 471 LIS 473



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 24/149 (16%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V ++D+NDN+P          LP   P       + + I+K+ A D D+G N +I YS+Y
Sbjct: 1796 VTVSDVNDNSPICDQVAYSASLPEDIP-------SNKIILKVSAKDADIGSNGDIRYSLY 1848

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGP 148
               NT   +F +DP SG ++T   L+  E+   Y++  +ATD GG+     V + ++   
Sbjct: 1849 GSGNT---EFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCHANV-LLLLEDV 1903

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   PVF  N Y   V E  +  + +  +
Sbjct: 1904 NDNPPVFSSNHYTACVYENTATKALLTRV 1932



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
           + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 17  IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 75

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
             ++ G  KF IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 76  DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 133

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+    +F +  Y+  V E   +   V  ++V
Sbjct: 134 PSPIPLMFDEPFYNFTVMESDKVTEIVGVVSV 165



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 42  NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           N+ D+NDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    +     
Sbjct: 852 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----ILQDDY 906

Query: 99  HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             F I+P SG +   E     ++   Y +T+ A D G  S    VE+ +    N   PVF
Sbjct: 907 GHFEINPNSGNVILKEAFNSDLSNIDYGVTILAKDGGNPSLSKSVELPITI-VNKAMPVF 965

Query: 156 QQNTYDVNVSEGASINSTVATI 177
            +  Y   ++E  ++N+ + +I
Sbjct: 966 DKPFYTATINEDVTMNTPILSI 987



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 17  GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
             F F V  R+    Q TA S PV + + + D+NDN P     +   + +       +++
Sbjct: 624 AHFHFHVHVRDSGSPQLTAES-PVEVNIEVIDVNDNPPVFTQAVFETVLLLPTYVGVEVL 682

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
           K+ ATD D  V  E+TYS+      G+  F +DP SGV+      ++ + Y + V+ +D 
Sbjct: 683 KVSATDPDSEVPPELTYSLME---GGVDHFLMDPNSGVLTIKDNNLSKDHYMLIVKVSD- 738

Query: 132 GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 739 -GKFYSTAMVTIMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 783



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 38   SLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            S+T+ + DINDN P       L  +P    +      Q++ + AT  D+G NAEITY I 
Sbjct: 2000 SVTITVLDINDNPPVFERRDYLVTVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIR 2055

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +  G  KFRI+P++G I     L     +++ + V+A D G  +      +S+ +   
Sbjct: 2056 SGNEQG--KFRINPKTGGISVLEALDYETCKRFYLVVEAKDGGTPALSAAATISIDLTNV 2113

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N   P F Q+ Y   +SE A
Sbjct: 2114 NDNPPQFSQDVYSAVISEDA 2133



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G       ++ + L D+NDN P            +    +  + +++A D 
Sbjct: 1878 YNLIARATDGGGRFCHANVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 1937

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D+G+N ++ YS+   S +G+  F ID  SGVI     L   +Q  Y+I+V+ATD   + S
Sbjct: 1938 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIILERPLDREQQSSYNISVRATDQSPRQS 1994

Query: 137  -QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++  V++ V   N   PVF++  Y V V E  S+ + V ++
Sbjct: 1995 LSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 2037



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
           D NDN P     P   +   E      +I++IEATD D     +++Y+I+  +    + K
Sbjct: 231 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDTMSMRK 287

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           FR+DP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 288 FRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTS 347

Query: 158 NTYDVNVSEGASINSTVATIT 178
             Y+ +V E A++ S V  +T
Sbjct: 348 PLYEASVFESAALGSVVLQVT 368



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 31/180 (17%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + V + D+NDN P         I ++     
Sbjct: 1558 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYETIIMEGMPVG 1609

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
             ++ ++ A D D G N ++TYS++  S++ L K    F ID  +G I T   L       
Sbjct: 1610 TKLAQVRAIDMDWGANGQVTYSLH--SDSHLEKVMEAFDIDSNTGWISTLKDLDHETDPA 1667

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +S +V A+D G     SS  +V V V    N  +PVF    Y  NV E       VA ++
Sbjct: 1668 FSFSVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 1726



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)

Query: 20   RFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--QIVKIEA 75
            RF ++   K G   A S   +++++L ++NDN P+        + + +A     ++ + A
Sbjct: 2085 RFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVYSAVISEDALEGDSVILLIA 2144

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D   N +I +SI  V     ++F +DP  G+++   KL    ++G  YS+ +QA D+
Sbjct: 2145 EDVDSKPNGQIRFSI--VGGDRDNEFAVDPILGLVKVKKKLDRERVSG--YSLLIQAVDS 2200

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G    SS T V +  +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 2201 GIPSMSSTTTVNID-ISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 2250



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90  IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           IY V +  ++  F I+P SGVI TT + +  EQ   Y + +QAT+  G +S   V + +V
Sbjct: 481 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEQTSAYQLIIQATNMAGMASNATVSIQIV 539

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              N   PVF  + Y  ++SE A INS V+++  S L
Sbjct: 540 -DENDNPPVFLSSQYSGSLSEAAPINSIVSSLDNSPL 575



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 7/104 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++++ +TD D G N  + Y I   +      F ID  SG+I  T +++  E     ++ V
Sbjct: 1085 VLQLVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKV 1143

Query: 127  QATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             ATD G    SS+ +V +  +   N   PVF Q  Y+  VSE A
Sbjct: 1144 TATDNGFPSMSSEVLVHI-YISDVNDNPPVFNQLIYESYVSELA 1186



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
             +V A +    + S  V + + ++D+NDN P    +I    +     R   V  ++A+D 
Sbjct: 1141 LKVTATDNGFPSMSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 1200

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
            D      + YSI  +S      F +D +SGV+  +   K      YS+ V  +D G  ++
Sbjct: 1201 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTN 1257

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               V + V+ G N  SP F Q+TY   V E A+  + V
Sbjct: 1258 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 1294



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +I+YSI  +++    +F ID  +G I TT +L     + G+  S
Sbjct: 1293 KVIHVPATDGDPGTYGQISYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 1348

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 1349 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 1388


>gi|297492721|ref|XP_002699810.1| PREDICTED: protocadherin-11 X-linked isoform 3 [Bos taurus]
 gi|296471045|tpg|DAA13160.1| TPA: protocadherin 11 Y-linked isoform 3 [Bos taurus]
          Length = 1307

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF  N Y+  V E    + TV  ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----I 59
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIQPNISFDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSF 682

Query: 60  QIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++ +  A     +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVSPSANPGTVVFTVVAIDNDTGMNAELRYSILGGNTKGL--FMIDQTTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 LADLGLHKLIVKAKDLGQPDS 761



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D G+N    Y +      G + 
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI----KGQNI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    +IET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+++  +V++ E A + S+V  +
Sbjct: 241 -DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|158259103|dbj|BAF85510.1| unnamed protein product [Homo sapiens]
          Length = 798

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
           +++TV + D+NDNAP            +       I  + ATD D G NA++TYS+    
Sbjct: 435 LNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQ 494

Query: 92  --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
             H+  T L     D        +    A + +   V A+D G    SS+ +V V VV  
Sbjct: 495 DPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRV-VVLD 553

Query: 148 PNTRSPV 154
            N  SP 
Sbjct: 554 ANDNSPF 560


>gi|426216136|ref|XP_004002323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2, partial [Ovis aries]
          Length = 2841

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 774 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 825

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   N G   F ++  SG++ T  +L      QY +  
Sbjct: 826 SVLQISATDRDSGLNGRVFYT-FQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 884

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T ++V+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 885 YAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 939



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 238 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 290

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLVEGSGGSPSEVFEIDPRSGVIRTRG 350

Query: 115 KLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            +     E Y +TV+A+  G +++   + +S V   N  +P F +  Y V V E  +  +
Sbjct: 351 PVDREEVESYQLTVEASXPGPRTATAAIFLS-VEDDNDNAPQFSEKRYVVQVREDVAPGA 409

Query: 173 TVATITVS 180
            V  +T S
Sbjct: 410 PVLRVTAS 417



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 569 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 627

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 628 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 678

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VN++E     +TV  I+ +   +G
Sbjct: 679 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 735



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 724 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 779

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 780 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 838



 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 10/161 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR-RQIVKIEATDN 78
           +Q+          +   ++ +++ D NDNAP+       +Q++   A    ++++ A+D 
Sbjct: 360 YQLTVEASXPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVAPGAPVLRVTASDR 419

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--- 133
           D G NA + YSI  +S     +F +D ++G ++    L     ++Y++ V+A D G    
Sbjct: 420 DKGSNALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPL 477

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +   +V V V+   N  +P+F    +   V E   +   V
Sbjct: 478 SNVSGLVTVQVL-DINDNAPIFVSTPFQATVLESVPLGYLV 517



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 865  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVF 922

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 923  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 980

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 981  DRPEYVLVIQATSAPLVSRATV 1002


>gi|297492719|ref|XP_002699809.1| PREDICTED: protocadherin-11 X-linked isoform 2 [Bos taurus]
 gi|296471044|tpg|DAA13159.1| TPA: protocadherin 11 Y-linked isoform 2 [Bos taurus]
          Length = 1334

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF  N Y+  V E    + TV  ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEAR--RQIVK 72
           + F V A +    + S    +T+N+ D+NDN P   ++PP     ++ +  A     +  
Sbjct: 639 YTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSFELVSPSANPGTVVFT 697

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +  +   + + V+A D
Sbjct: 698 VVAIDNDTGMNAELRYSILGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVKAKD 755

Query: 131 TGGKSS 136
            G   S
Sbjct: 756 LGQPDS 761



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|410334089|gb|JAA35991.1| dachsous 1 [Pan troglodytes]
          Length = 3298

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 422 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPAFDRQLYRP 479

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 480 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 533

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  +TV ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 534 ASLDYELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 593

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 594 GTCFLQVTATDADSG 608



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2344 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2398

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2399 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2454

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F  + Y V V+E     ST+ T+
Sbjct: 2455 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLSHYRVAVTEDLPPGSTLLTL 2504



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2139 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2197

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2198 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2255

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2256 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2310



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1635 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTYG-- 1687

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1688 GVSS---ESFSLDPDTGVLTTLRALDREEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDE 1744

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1745 NDHAPTFGSAHLSLEVPEG 1763



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ A +    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1821 FQLRIEAWDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1879

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1880 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAA 1936

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1937 AGPLSTTVSVTITVRDVNDHAPTF 1960



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 207 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 263

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D GVN  +TY I    + G   F ID  +G+++    L
Sbjct: 264 VSESLAPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 320

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 321 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 380

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 381 PGQLVARISVS 391



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 882  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 934

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 935  AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHDLELEARDGGSPPRTSHFRLRVVVQDVGTR 994

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 995  GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1022



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1124 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1182

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
              D G   +S+   V V+V+   N  SP F Q
Sbjct: 1183 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1213



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1536 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1585

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L   +  ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1586 SGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1644

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E +   +++ T+
Sbjct: 1645 EAPTFQQQEYSVLLRENSPPGTSLLTL 1671



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2672 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2728

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2729 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2782

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2783 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2826



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1735 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1794

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1795 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEAWDGGQPALSATLLLTVTVLDANDHA 1852

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1853 PAFPVPAYSVEVPE 1866


>gi|397518008|ref|XP_003829192.1| PREDICTED: protocadherin beta-13-like [Pan paniscus]
          Length = 798

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|359081710|ref|XP_003588167.1| PREDICTED: protocadherin-11 X-linked [Bos taurus]
          Length = 1326

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF  N Y+  V E    + TV  ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEAR--RQIVK 72
           + F V A +    + S    +T+N+ D+NDN P   ++PP     ++ +  A     +  
Sbjct: 639 YTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSFELVSPSANPGTVVFT 697

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +  +   + + V+A D
Sbjct: 698 VVAIDNDTGMNAELRYSILGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVKAKD 755

Query: 131 TGGKSS 136
            G   S
Sbjct: 756 LGQPDS 761



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D G+N    Y +      G + 
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI----KGQNI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    +IET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+++  +V++ E A + S+V  +
Sbjct: 241 -DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|359081714|ref|XP_003588168.1| PREDICTED: protocadherin-11 X-linked [Bos taurus]
          Length = 1336

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF  N Y+  V E    + TV  ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEAR--RQIVK 72
           + F V A +    + S    +T+N+ D+NDN P   ++PP     ++ +  A     +  
Sbjct: 639 YTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSFELVSPSANPGTVVFT 697

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +  +   + + V+A D
Sbjct: 698 VVAIDNDTGMNAELRYSILGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVKAKD 755

Query: 131 TGGKSS 136
            G   S
Sbjct: 756 LGQPDS 761



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D G+N    Y +      G + 
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI----KGQNI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    +IET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+++  +V++ E A + S+V  +
Sbjct: 241 -DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|344245256|gb|EGW01360.1| Protocadherin alpha-4 [Cricetulus griseus]
          Length = 2770

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           +LV+ K +LDR+     + +  ++A +      +  V + + + D+NDN P  P  +  +
Sbjct: 499 FLVLGK-SLDRE--ENAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKV 555

Query: 60  QIQAGEAR-RQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A    +VK+ A+D D G N+EI YS+   VS+T   KF+IDP SG I T G L 
Sbjct: 556 QLLENTANGTLVVKLNASDADEGSNSEIVYSLSSDVSSTTRTKFQIDPTSGEIRTNGGLD 615

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVN-VSEGASINST 173
             E+  Y I V A+D G  S     ++SV +   N  +P     ++  + V E A + + 
Sbjct: 616 YEERTAYEIQVIASDKGTPSMSGHCKISVKLVDINDNTPEVSITSFLSDPVKEDALLGTV 675

Query: 174 VATITVSRLASG 185
           +A I+VS   SG
Sbjct: 676 IALISVSDRDSG 687



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 37   VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V L + + D NDN+P        +  P  +  G     +VK+ A+D D G+N ++ YS  
Sbjct: 1286 VQLLITVLDANDNSPVFDRSLYTVKLPENVPNGTL---VVKVNASDLDEGLNGDVMYSFS 1342

Query: 92   -HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG----GKSSQTIVEVSV 144
              +S     KF IDP +G I   G +   E   Y I ++  D G        + IVE+  
Sbjct: 1343 TDISPDVKRKFYIDPVTGQITVKGYIDFEECKSYEILIEGIDKGQLPLSGHCKVIVEIQD 1402

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +   N   P  +  +  + V E A + + +A I+VS   SG
Sbjct: 1403 I---NDNVPALEFKSLSLPVLENAPVGTVIALISVSDRDSG 1440



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 11/165 (6%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNA 84
           E +GT     V L + + D+NDNAP     +   Q+    A   +V  + A+D D GVN 
Sbjct: 203 ELEGT-----VRLQITVLDVNDNAPLFDQAVYRAQLVESTANGTLVTTLNASDADEGVNG 257

Query: 85  EITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVE 141
           E+ +S  + VS     KF++D   G I   G L     + Y I V+A D G        +
Sbjct: 258 EVVFSFGNDVSADIQEKFKVDSILGEIRVIGDLDYEKIKSYEIQVKAVDKGTPPMSNHCK 317

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V V V   N  +P  +  +  + + E A +++ +A I VS   SG
Sbjct: 318 VLVKVLDINDNTPELEITSLSLPIKEDAPLSTVIALIKVSDRDSG 362



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V K+ LDR+  +  +     I   K     +V   L +++ D NDNAP     +     
Sbjct: 2058 LVLKKPLDREETHEHRLLLTAIDGGKPELTGTV--QLLIDVLDANDNAPEFDQSVYNVRL 2115

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH----KFRIDPRSGVIETTGKL 116
            +++      ++K+ A+D D G+N EI   +Y  SN  L     KF ID  SG I+  G L
Sbjct: 2116 LESTPNETLVIKLNASDADEGMNKEI---LYFFSNLVLEDVKSKFTIDSTSGEIKVKGAL 2172

Query: 117  IAGEQ--YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
               ++  Y I + A D          + IV++  V   N   P     +  + + E A +
Sbjct: 2173 DYEDRKLYEINIDAVDRSTFPLAGHCKVIVKLVDV---NDNVPEMAITSLFLPIKEDAQL 2229

Query: 171  NSTVATITVSRLASG 185
             + +A I+VS   SG
Sbjct: 2230 GTVIALISVSDRDSG 2244



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNT 96
            V L D+NDN P +    +  PI+  A +    I  I  +D D GVN ++T S+  HV   
Sbjct: 2202 VKLVDVNDNVPEMAITSLFLPIKEDA-QLGTVIALISVSDRDSGVNGQVTCSLTPHVPFK 2260

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             +  F+ +  S V+++         Y + V A D G  S      VSV V   N  +P F
Sbjct: 2261 LVSTFK-NYYSLVLDSALDRETVANYHVVVTARDGGSPSLWATASVSVEVADVNDNAPAF 2319

Query: 156  QQNTYDVNVSE 166
             Q  Y V V E
Sbjct: 2320 AQPEYTVFVKE 2330



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 10/167 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEA 75
           +  QVIA +K   + S    ++V L DINDN P + +   +     E       I  I  
Sbjct: 622 YEIQVIASDKGTPSMSGHCKISVKLVDINDNTPEVSITSFLSDPVKEDALLGTVIALISV 681

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D G N ++T S+  HV    +  F+ +  S V+++         Y + V A   G  
Sbjct: 682 SDRDSGANGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRETTADYKVVVTAPPRGSP 740

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           S      +SV V   N  +P F    Y V V E    GA I +  AT
Sbjct: 741 SLWATASMSVEVADVNDNAPAFAHPEYTVFVKENNPPGAHIFTVSAT 787



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 11/105 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI-------- 70
             +FQV AR+    A    V+L V + D NDNAP L + P   +  G   R +        
Sbjct: 1591 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPLL-LEPEGSVSGGVVSRLVSRSVGAGH 1649

Query: 71   --VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
               K+ A D D G NA ++Y +   +      FR+   +G I TT
Sbjct: 1650 VVAKVRAVDADSGYNAWLSYELQSSAGNSRIPFRVGLYTGEITTT 1694



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 41   VNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNT 96
            V + DINDN P L    +  P+ ++       I  I  +D D G N ++T S+  +V   
Sbjct: 1398 VEIQDINDNVPALEFKSLSLPV-LENAPVGTVIALISVSDRDSGANGQVTCSLTPNVPFK 1456

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             +  F+ +  S V+++T        Y + V A D G  S  T   VSV V   N  +P F
Sbjct: 1457 LVSTFK-NYYSLVLDSTLDRETTTDYKVVVTARDGGSPSLWTTASVSVEVADVNDNAPAF 1515

Query: 156  QQNTYDVNVSE----GASINSTVAT 176
             Q  Y V V E    GA I +  AT
Sbjct: 1516 AQPEYTVFVKENNPPGAHIFTVSAT 1540



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +    + AG    Q V       
Sbjct: 838 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPVL--LSHGAVGAGGTVSQFVSRSVVSG 895

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 896 HVVAKVRAIDADSGYNAWLSYELQSSAGNSRSLFRVGLYTGEISTTRSL 944



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 6/116 (5%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            Y +V    LDR+      +   V AR+    +     S++V + D+NDNAP     P   
Sbjct: 2269 YSLVLDSALDRE--TVANYHVVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQ-PEYT 2325

Query: 61   IQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            +   E       I  + A D D G NA ++Y +   +      FR+   +G I TT
Sbjct: 2326 VFVKENNPPGAHIFTVRAVDADSGYNAWLSYELQPAAGGVRSPFRVGLYTGEISTT 2381



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQ--IQAGEAR--RQIVKIE-ATDNDLGVNAEITYSIYHVSN 95
            V + DINDN P   M P  Q  +   E+R       +E A+D D+G+NA +TY +     
Sbjct: 1181 VEVRDINDNPP---MFPATQKNLFIAESRPIDTWFPLEGASDADIGINAMLTYRLSPNDY 1237

Query: 96   TGLHKFRIDPR-SGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
              L K   D R  G+     K +  E   +  + +  TD G       V++ + V   N 
Sbjct: 1238 FSLEKPSDDGRIKGLGLVLRKSLDREETPEIFLVLTVTDGGKPELTGTVQLLITVLDAND 1297

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             SPVF ++ Y V + E     + V  +  S L  G
Sbjct: 1298 NSPVFDRSLYTVKLPENVPNGTLVVKVNASDLDEG 1332


>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
          Length = 4593

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 30/210 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P        V A++  G      V +T  L D NDNAP          +
Sbjct: 2556 IYTTEKLDREDPANKDIVLTVAAQDLGGRVCYCTVQVT--LLDDNDNAPCF--------R 2605

Query: 63   AGEARRQI----------VKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIE 111
            A E R  +           +I+A D D G+NA++TYS+Y  +N   +    IDP +G + 
Sbjct: 2606 ATEYRASVKSDVAQGFLVTQIQAHDPDHGINAKVTYSLYSEANVPVVDILEIDPDNGWMV 2665

Query: 112  TTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            T G          S  V+A D G     ++V V + V  P T  P F Q  Y  N  E  
Sbjct: 2666 TKGSFSHFRNSVLSFFVKAVDGGNPVRHSLVSVYIHVLSPETFIPSFSQYHYLFNTPENT 2725

Query: 169  SINSTVATITV------SRLASGCAIMNKE 192
             I S + T+ +      + L++  A++N E
Sbjct: 2726 PIGSVIGTVHLNTPLEFTSLSTTFALVNGE 2755



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 9/144 (6%)

Query: 37   VSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V++T+ + DINDN P   R   +  +    G    +++++ A   D+G NAEITYSI   
Sbjct: 3233 VNVTITVLDINDNPPVFERRDQLASVPEDVG-VGTEVLRVYAASKDIGTNAEITYSIRSG 3291

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +  G  KF I P +G I     L       Y +TV+A D G  S   I  V++ +   N 
Sbjct: 3292 NEHG--KFHIHPLTGAILVAQPLDYETCRDYFLTVEARDGGTPSLSAITTVNIDLTDVND 3349

Query: 151  RSPVFQQNTYDVNVSEGASINSTV 174
              P+F  + Y   VSE A++   V
Sbjct: 3350 NPPMFSHSVYTAVVSEDATVGEPV 3373



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 9/162 (5%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            VI ++++       V + + + D+ND+ P     +      ++      +V++ A D D 
Sbjct: 1540 VIVKDQEFPYRKDLVRVLIEVEDVNDHVPNFTSALYEGSVYESAAVGSAVVQVTALDKDK 1599

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SS 136
            G NAE+ YSI    N+G + F+++P  GVI    +L       Y +TV+  D+G    S+
Sbjct: 1600 GENAELHYSI-EAGNSG-NTFQVEPVLGVITVAHELDLSSIGHYILTVRVIDSGSPPLST 1657

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             TIV ++V    N   P F Q  Y   + E A + ++V+T++
Sbjct: 1658 TTIVRIAVTLSDNA-GPKFPQPEYQTEIMENALVGTSVSTVS 1698



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 10/153 (6%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V + V + D NDN P  P  +  +++   E R++   I ++ A D D G N +++YSI  
Sbjct: 1242 VWVIVQVLDENDNKPIFPEKVYQVKLPERERRKKGEPIYRVFAYDRDDGPNCDLSYSIVD 1301

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPN- 149
             +  G  KF IDP++ V+ +     AG    +T++ATD G   KSS   + +  +  P  
Sbjct: 1302 GNEDG--KFFIDPKTAVVSSRKAFSAGSYDILTIKATDNGRPQKSSTARLHIEWIRRPPG 1359

Query: 150  -TRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             T   +F +  Y+  V E   +   V  ++V +
Sbjct: 1360 LTLPLIFDEPFYNFTVMENDRVAEIVGVVSVQQ 1392



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D NDN+P     M      +   A   ++++ ATD D+G++  I YS++    
Sbjct: 3027 TVEVTVVDTNDNSPICDKVMYTAYIPEDLPANSVLLRVGATDADMGISGWIQYSLH---G 3083

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
             G   F IDP SG I+++  L       Y +  QATD GG+  + +V ++V    N   P
Sbjct: 3084 PGSQDFNIDPDSGEIKSSVPLDREMTPSYQLVAQATDGGGRWCRAVVYLTVT-DVNDNPP 3142

Query: 154  VFQQNTYDVNVSE 166
            +F Q+ Y  +V E
Sbjct: 3143 IFTQSRYTTSVYE 3155



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 10/177 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L+++   LD +     K+ F V A +      S  VS+TV LNDINDN P    ++    
Sbjct: 2349 LILTARMLDHELLQ--KYDFIVRATDNGFPPLSSEVSVTVMLNDINDNPPVFNQLLYEAY 2406

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLI 117
            +     R   +  ++A+D D     ++ YSI  +S      F I+ ++G+I  +   K  
Sbjct: 2407 VNELATRGHFITCVQASDADSSDFDKLEYSI--LSGNEKRNFAIEKKTGIITLSSHRKQR 2464

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                YS+ V  +D G  +S   V V V    N  SPVF QN Y   + E A++ + V
Sbjct: 2465 MEPAYSLNVSVSD-GVFTSTAQVHVKVWRA-NLHSPVFGQNMYGAELRENAAVGTKV 2519



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 18/150 (12%)

Query: 39  LTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
           LTV + D NDN P+        ++ P  I  G     ++++EA D DLG N EI YS+  
Sbjct: 817 LTVYIEDANDNTPQFLQEGGFRIVIPENIALG---TDVIQVEAIDKDLGPNGEIVYSLL- 872

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVS---VVPG 147
              T   +F I+  SG++   G+L       +++ ++A D   K SQ     +   ++  
Sbjct: 873 ---TSTTQFGINSTSGILYVAGQLDREFVSTFNLKIEARDKAEKGSQKFSVTTLKIILED 929

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P+F    Y   V E   I + VA +
Sbjct: 930 VNDCPPLFIPAVYRTRVLEDLPIGTVVAWL 959



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   V AR+    + S   ++ ++L D+NDN P         + + +A     +++++A 
Sbjct: 3320 YFLTVEARDGGTPSLSAITTVNIDLTDVNDNPPMFSHSVYTAVVSEDATVGEPVIQLKAD 3379

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D  +N  + YSI  VS    ++F IDP SGVI+   +L       YS+ ++A D+G  
Sbjct: 3380 DVDSQLNGAVLYSI--VSGDRHNQFLIDPLSGVIKVNKQLDRETVPSYSLAIRALDSGTP 3437

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
               + V V++ +   N   P F      V + E   + +++  ++V
Sbjct: 3438 PMSSTVMVNIDISDINDNPPTFSPANLSVVIQENKPVGTSILQLSV 3483



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 16/144 (11%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            DINDNAP    LP    +Q++A E    I +  A D D G+N +++Y  Y   + G   F
Sbjct: 2080 DINDNAPVFVGLPYYAAVQVEA-EPGSPIFRAMAVDGDKGINGQVSY--YLKDDHG--HF 2134

Query: 102  RIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVE--VSVVPGPNTRSPVFQ 156
             I+ ++G +         ++  +Y + + A D+G     + +E  ++VV   N   PVF 
Sbjct: 2135 EINRQTGSLSLKRSFESDLSNVEYRMVIYARDSGYPPLSSTIEFPITVV---NKAMPVFA 2191

Query: 157  QNTYDVNVSEGASINSTVATITVS 180
            ++ Y V V+E  ++++ +  I  S
Sbjct: 2192 KSFYTVAVNEDVAVHTPILGINAS 2215



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 5/111 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D+D G + E+ YSI     +GL +F ID  +GVI TT  L   + + Y +TV 
Sbjct: 1063 LLQVTANDDDAGRDGEVQYSIR--DGSGLGRFAIDEETGVIYTTDMLDRESKDSYWLTVY 1120

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD G     T ++V + V   N  +P+  +  Y  +V E +  + +V  I
Sbjct: 1121 ATDHGVVPQFTSIDVFIQVEDVNDNAPLTSEPLYRTSVPENSPRDVSVIQI 1171



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 20/136 (14%)

Query: 19   FRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARR 68
            F F V  R+    Q TA S P  +T+ + D ND+ PR         ++ P  +       
Sbjct: 1851 FHFHVHVRDNGTPQLTAES-PTEVTIQVIDTNDSPPRFTQSSYETVLLLPTYVGV----- 1904

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            + +++ ATD D  + AE+ YS+   ++  L  F I P SG+I       + E++  +V+ 
Sbjct: 1905 EALQVSATDPDKDIPAELIYSL---TDGELQHFGIKPSSGIIVVKNNNFSKERFRFSVRV 1961

Query: 129  TDTGGKSSQTIVEVSV 144
            +D G  SS  +V + V
Sbjct: 1962 SD-GKFSSMALVTILV 1976



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)

Query: 99   HKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            H F+I+  SGVI TT K +  E    Y++ VQA +  G +S   + + VV   N   PVF
Sbjct: 1716 HVFKINQYSGVI-TTQKSLDYETTTSYTLIVQAINMAGMASNATLLIQVVDD-NDNPPVF 1773

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
            Q+  Y  ++SE A INS V  +  S L       ++ +N+
Sbjct: 1774 QELHYHGSISEAAPINSVVLNLDGSPLVIKATDADRNQNA 1813



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 14/111 (12%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSI 124
            ++++++ATD D G    ITYS   V++ G  KF ID  +G I TT KL     A +   +
Sbjct: 2518 KVIQVKATDADPGEFGLITYSF--VNDVGKDKFSIDA-NGQIYTTEKLDREDPANKDIVL 2574

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            TV A D GG+     V+V+++   N  +P F+   Y       AS+ S VA
Sbjct: 2575 TVAAQDLGGRVCYCTVQVTLL-DDNDNAPCFRATEYR------ASVKSDVA 2618



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQ 127
            +++ ATD D   N+ + Y I+  S      F ID  SG+I  T +++  E   +Y   V+
Sbjct: 2311 LQVVATDKDSEKNSVVRYQIFSNSRNNTEYFHIDSSSGLI-LTARMLDHELLQKYDFIVR 2369

Query: 128  ATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ATD G     + V V+V+    N   PVF Q  Y+  V+E A+    +  +  S
Sbjct: 2370 ATDNGFPPLSSEVSVTVMLNDINDNPPVFNQLLYEAYVNELATRGHFITCVQAS 2423



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 19   FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
            + F+V A  +Q    SV  V + V + D+NDN P           ++      +I++++A
Sbjct: 2788 YYFKVTATAQQAKLDSVSCVEVEVKVLDLNDNKPAFEANSYDTTIMEGMPVGTRIIQVQA 2847

Query: 76   TDNDLGVNAEITYSIYHV------SNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
             D D G N ++TY++  +      S+T +  F ID  +G I TT K +  E    Y+ TV
Sbjct: 2848 RDPDSGANGQVTYTLGSLIQLKEDSDTLVSTFSIDSNTGWI-TTRKDLDHETSPSYTFTV 2906

Query: 127  QATDTG 132
             A+D G
Sbjct: 2907 VASDLG 2912



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +++ + D+ND  P   P    + I ++   R  I ++ ATD D+G N E  Y  +    T
Sbjct: 147 VSIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADIGSNGEFYY--FFKEKT 204

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            L  F + P SGV+  +G+L   EQ  Y + + A D G K
Sbjct: 205 EL--FAVHPTSGVVTLSGRLNVDEQNRYDLEILAVDRGMK 242



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 23/127 (18%)

Query: 19   FRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------- 69
            F  ++ AR+K  +G+      +L + L D+ND        PP+ I A    R        
Sbjct: 901  FNLKIEARDKAEKGSQKFSVTTLKIILEDVND-------CPPLFIPAVYRTRVLEDLPIG 953

Query: 70   --IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              +  +E  D DLG+  ++ YS+    N     F +D  +GVI  T +L    Q  Y++T
Sbjct: 954  TVVAWLETLDPDLGLGGQVRYSLASDYNGW---FEVDRANGVIRLTKELDYETQQFYNLT 1010

Query: 126  VQATDTG 132
            V+A D G
Sbjct: 1011 VKAKDKG 1017



 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 21  FQ-VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEAT 76
           FQ V   E     +++ V + V + D ND+ P        ++   E+      ++ + A 
Sbjct: 439 FQDVFNLEVMEMDSNLKVKVRVTIEDANDHTPTFAQ-SSYEVFVNESVPVATSVLTVSAV 497

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG 133
           D D G N  ITYSI   S+     F+I+  SGVI TT +L    + E +   V+A+D G 
Sbjct: 498 DKDKGENGYITYSI---SSLQPLPFKINQFSGVISTTEELDFESSSESFMFIVRASDWGS 554

Query: 134 -KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               ++ V V++ +   N   P+F++      + E   +N  + T++
Sbjct: 555 PYRRESEVNVTIHLENVNDNQPLFEKVACQGIIPEDFPVNEVITTMS 601



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 10/80 (12%)

Query: 109  VIETTGKLIAG-----EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            V++T G +I       EQ   Y++TVQATD G  ++ T + ++V+   N  +P+F Q TY
Sbjct: 1412 VVKTVGTIIIAKPLDAEQCSFYNMTVQATD-GTSTAHTQIHITVMDN-NDNAPIFFQPTY 1469

Query: 161  DVNVSEGASINSTVATITVS 180
            DV VSE    ++ V  +  S
Sbjct: 1470 DVIVSEDTPPDTKVVQVQAS 1489


>gi|345311430|ref|XP_001516340.2| PREDICTED: protocadherin gamma-B7-like [Ornithorhynchus anatinus]
          Length = 834

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 23/195 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------- 55
           +V  ++LDR+  +   +   + A +      S    + +N+ D NDN P           
Sbjct: 194 IVLAKSLDRE--DQSFYHLLLTAVDGGDPVHSGTAQIRINVTDANDNPPMFSQDVYKVSL 251

Query: 56  ---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +PP           ++++EATD D GVNA+IT+S   + +T  H F +DP SG I T
Sbjct: 252 RESLPP--------GSPVLRVEATDRDEGVNAQITFSFSSIEDTARHVFSLDPVSGEIVT 303

Query: 113 TGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              L   E  +Y + V+ATD GG + QT V + ++   N  +P     +    V E +  
Sbjct: 304 KRILDFEEANRYKMDVEATDGGGLTDQTKVVIEIL-DENDNAPEVTFTSVSSPVPEDSVS 362

Query: 171 NSTVATITVSRLASG 185
            + +A I    L SG
Sbjct: 363 GTMIALIKTRDLDSG 377



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 13/163 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F   V A++         V++ V + D NDNAPR+  P + P       +  ++ E    
Sbjct: 528 FELHVQAQDSGSPPLRANVTVRVFIVDQNDNAPRILYPALGPEGSALFDMVPRSAEPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           + K+ A D D G NA + Y +   S+ GL  F +  R+G I TT  L+ G+  ++ + V 
Sbjct: 588 VSKVVAVDADSGPNAWLAYHVLQASDPGL--FSLGLRTGEIRTTRALVDGDPSRHRLLVA 645

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             D G     + V + +V   + +  + + N    + S  A +
Sbjct: 646 VRDGGQPPLSSTVALHLVFADSLQEALPEMNDSSAHTSRQADL 688


>gi|426257897|ref|XP_004022558.1| PREDICTED: protocadherin-11 X-linked-like isoform 3 [Ovis aries]
          Length = 1326

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + L D NDNAP    P I     +      Q+ KI ATD D G NAEI Y +      
Sbjct: 452 LLIKLKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G  S  T   V V V   N  SP
Sbjct: 509 APSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
           + F V A++    + S    +T+N+ D+NDN P            ++PP    +      
Sbjct: 639 YTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVPP----SASPGTV 694

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           +  + A DND G+NAE+ Y+I   +  GL  F ID  +G I    K +  +   + + V+
Sbjct: 695 VFTVVAIDNDTGMNAELRYNIVGGNTKGL--FMIDQTTGNITLKEKCVLADLGLHKLIVK 752

Query: 128 ATDTGGKSS 136
           A D G   S
Sbjct: 753 AKDLGQPDS 761



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFNVKAQDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    +IET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----IIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF+++  +V++ E A + S+V  +
Sbjct: 235 LQVSVA-DTNDNHPVFKEDEIEVSIPENAPVGSSVTQL 271



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +   + VS+     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLFHLNSTTGLITVKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVLLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386


>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
          Length = 4928

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+        + I 
Sbjct: 2945 NINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIK 3004

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             I   D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+     + ITV A 
Sbjct: 3005 VIAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNRNFYITVTAK 3062

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    SSQT VE++V    N  +P F Q+     + E  SI S V T++
Sbjct: 3063 DKGNPPLSSQTTVEITVTE-ENYHTPEFSQSHMSATIPESHSIGSIVRTVS 3112



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  V + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DVRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTAIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDITSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGTPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S T + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMTRINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINEKNGTISLLGPLDVQAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGTPPQSSMTRINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNTQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDVRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQTLYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQA D G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSSAA 390



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P I +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAV 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSVRPLDREKVSYYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S    V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSASVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFV 2559



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSNTGLHKFRIDPRSGVIETTG 114
             R    + K+ A D D G N E+ YS         ++ +S    + ++ D R  ++   G
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFD-RESLMRRRG 1171

Query: 115  KLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  
Sbjct: 1172 TAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANL 1226

Query: 172  STVATITVSRLASG 185
            + V  ++ S +  G
Sbjct: 1227 TQVLRVSASDVDEG 1240



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +   + + +K   + S  V + +N+ D NDNAPR   I    + +       + ++  +D
Sbjct: 2739 YVLTIKSSDKGSPSQSASVKVMINILDENDNAPRFSQIFSAHVPENSPLGYTVTRVTTSD 2798

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKS 135
             D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I V A D+G   
Sbjct: 2799 EDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSGWTV 2854

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 2855 STDV--TIFVTDVNDNAPRFGRPSYYLDCPELTEIGSKVTQV 2894



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|380802201|gb|AFE72976.1| protocadherin beta-8 precursor, partial [Macaca mulatta]
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 8/146 (5%)

Query: 45  DINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D+NDNAP     P  ++Q  E       +VK+ ATD D GVN EI+YS++  S+     F
Sbjct: 20  DVNDNAPEFEQ-PFYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTF 78

Query: 102 RIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           ++D  +G IE   +L     + Y + ++A D GG S +  + + V+   N  +P    + 
Sbjct: 79  KVDSLTGEIELKKQLDFEKLQSYEVNIEARDAGGFSGKCTILIQVM-DVNDHAPEVTMSA 137

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
           +   + E A   + VA  +VS L SG
Sbjct: 138 FTSPIPENAP-ETVVALFSVSDLDSG 162


>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
          Length = 3255

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 12/187 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
           +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+    +    +
Sbjct: 77  LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITISDVNDHIPKFSRAVYSFDV 131

Query: 62  QAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                   IV  I ATD+D GVN EITY++    + G+  F ++P +GV   T  L    
Sbjct: 132 AEDTIPGSIVAAILATDDDSGVNGEITYAVSDDDDDGI--FFLNPVTGVFNVTRALDYEL 189

Query: 121 Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           Q  Y +TV A D GG+ S   V  +++   N   PVF +N+Y  +V E     ST+ T  
Sbjct: 190 QQYYVLTVCAQDGGGQDSCVRVYFNIL-DVNDNPPVFSRNSYSASVMENLPPGSTILTFN 248

Query: 179 VSRLASG 185
           V+    G
Sbjct: 249 VTDADDG 255



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           ++S   LDR+  +   +   VIA +      +   ++TVN+ D+NDN PR    P     
Sbjct: 698 IISSSLLDREAKD--HYTLLVIATDGGSPPLTSTTNVTVNIRDVNDNPPRFLHHPYVTHI 755

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P    AG     +  +  TD D+G NAE+ +S+         KF IDP  G I T G + 
Sbjct: 756 PSPTTAGSF---VFAVTVTDEDIGSNAELHFSL---KGRNSEKFHIDPLRGAIRTAGAIE 809

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + + +V   D G  S   +  V+V        P+ + +       E   + + V+TI
Sbjct: 810 GASEITFSVHVRDGGLNSKTDLTTVTVRFANKADFPLIRADRKTFTFPENQEVGTLVSTI 869



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V A ++         ++++N+ D NDNAP+        P+   A +   +++
Sbjct: 1225 NINRHSFIVSASDRGSPPIMSETTVSINIVDSNDNAPKFSSTKYFTPVSKNA-KIGTKLI 1283

Query: 72   KIEATDN-DLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
            K+ A D+ D G+N+E+ YS+   S   +H KF+ID  +G I     L+    + Y I V 
Sbjct: 1284 KVTAVDDKDFGLNSEVGYSL---STENIHGKFQIDKETGWITVASSLMMDINKNYMIKVF 1340

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G    SSQ +V ++V    N  +P F Q+   V V E  S+ + + TI+
Sbjct: 1341 AKDKGNPPLSSQALVNITVTE-ENYHTPEFSQSHVSVTVLESLSVGTVIRTIS 1392



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   V AR+      S    L + + D+NDN P+    P I +I    + R+I+ I A 
Sbjct: 914  KYELWVEARDMGFPPFSSYEKLEITVLDVNDNQPQFKQDPFIAEIIENLSPRKILTISAE 973

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D G N ++ Y+I+  +      F I+  +G I  T +L      QY+++V+A+D G  
Sbjct: 974  DKDSGSNGQVEYTIFDGNKEAF--FSINRVNGEIRNTRQLDREKASQYTLSVKASDKGSP 1031

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  +IV+V + V   N  +P F Q  +   V+E A +   V  +T S   +G
Sbjct: 1032 ARSSIVKVIIYVLDDNDNAPRFSQ-IFSAFVAENAVLGCFVTQVTTSDEDAG 1082



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41  VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           + L DINDN P  P   +   ++   G+  + I+++ ATD D G NA +TY+I   ++  
Sbjct: 9   ITLQDINDNPPVFPTDILDLTVEENVGDGSK-IMQLTATDADEGPNALVTYTIISGAD-- 65

Query: 98  LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ +   N   P F
Sbjct: 66  -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHIPKF 122

Query: 156 QQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  Y  +V+E     S VA I  +   SG
Sbjct: 123 SRAVYSFDVAEDTIPGSIVAAILATDDDSG 152



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 39   LTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +T+ + D+NDN P  +     P  ++   +   ++++ ATD D   NA I YS+   S++
Sbjct: 1460 VTIYVKDVNDNPPIFKADEYFPSVMENAPSGTTVIRLNATDVDSAPNAVIAYSV-QSSDS 1518

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
             L  F IDP +G+I T G L     + Y +TV+A +   +   + V V+V + G N   P
Sbjct: 1519 DL--FVIDPNTGIITTQGFLDYETKQHYHLTVKAFNVPDEERCSFVTVTVQLEGANEYVP 1576

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             F    Y   VSE A   + V  +  S    G
Sbjct: 1577 RFVSKLYYFEVSEAAPKGTVVGEVFASDRDGG 1608



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 11/164 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +   +   +IA++K   + S  + + + + DINDN+P        +++  E+  
Sbjct: 393 LDRE--DISNYTLTIIAKDKGEPSLSSSMDMNIIVLDINDNSPHFSQ-RHFKVEISESTL 449

Query: 68  --RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               ++++ A+D D G+N  + Y+I  +     ++FRID  +GV+     L    +  Y+
Sbjct: 450 TGTDLIQLIASDADEGINGMVRYAI--IDGNPSNEFRIDSVTGVLSIARPLDRERKSSYT 507

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSE 166
           + +QA+D G         VS++    N   P F+ + Y V+V E
Sbjct: 508 LKIQASDRGSSPRSDTATVSILLSDINDVVPKFELSPYTVSVPE 551



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQA 63
           LDR+      +  ++ A ++  +  S   ++++ L+DIND  P+  + P     P  ++ 
Sbjct: 498 LDRE--RKSSYTLKIQASDRGSSPRSDTATVSILLSDINDVVPKFELSPYTVSVPENLET 555

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
               + I+++ A D+D G+N+ +TYS+   +  G        +  +I++  + +  E YS
Sbjct: 556 --LPKIILQVVARDDDQGLNSRLTYSLASGNEDGAFTLSSSGQLSLIKSLDREVK-EWYS 612

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           + + ATD G  +      +S+ V   N   P F  N + + + E A   + +  +  S  
Sbjct: 613 LLITATDAGFPALTGTGTISIQVEDINDNKPTFALNHHFITIPEDAPTGTDILMVNCSDS 672

Query: 183 ASG 185
            +G
Sbjct: 673 DAG 675



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 21/163 (12%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            +  +V   +T+ + D+NDNAPR    P   +   E      ++ ++ ATD+D G+N  + 
Sbjct: 1130 SGWTVSTDVTIFVTDVNDNAPRFSK-PSYYLDYPETLDIGSKVTQVFATDSDEGLNGHVY 1188

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKL------IAG----EQYSITVQATDTGGK--S 135
            Y I   S      FRI+  +G I     L      ++G     ++S  V A+D G     
Sbjct: 1189 YFIKSQSEL----FRINSTTGEIFNKQHLKYQNPSVSGNININRHSFIVSASDRGSPPIM 1244

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            S+T V +++V   N  +P F    Y   VS+ A I + +  +T
Sbjct: 1245 SETTVSINIVDS-NDNAPKFSSTKYFTPVSKNAKIGTKLIKVT 1286



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 9/135 (6%)

Query: 37  VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V +++ L D+NDN P    P +  +Q +       + + +ATD D G N+ I YS+  + 
Sbjct: 316 VEVSIILLDVNDNPPSFISPKLTYVQ-ENTPTDTVVFRAQATDPDSGPNSYIQYSL--LG 372

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS-VVPGPNTR 151
           + G +KF I    G +  TG+L   +   Y++T+ A D G  S  + ++++ +V   N  
Sbjct: 373 SLG-NKFSIGIIDGEVRLTGELDREDISNYTLTIIAKDKGEPSLSSSMDMNIIVLDINDN 431

Query: 152 SPVFQQNTYDVNVSE 166
           SP F Q  + V +SE
Sbjct: 432 SPHFSQRHFKVEISE 446



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 11/172 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+     ++   V A +K   A S  V + + + D NDNAPR   I    +       
Sbjct: 1011 LDRE--KASQYTLSVKASDKGSPARSSIVKVIIYVLDDNDNAPRFSQIFSAFVAENAVLG 1068

Query: 69   QIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              V ++  +D D G NA    S Y +++T L  F I+  +GVI  +  L     ++Y + 
Sbjct: 1069 CFVTQVTTSDEDAGANA---ISRYTIADTSL-PFHINLNTGVITVSRPLNREDNDRYIVR 1124

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 1125 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSKPSYYLDYPETLDIGSKVTQV 1174



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
            V++TV L   N+  PR    +   ++     +  +V ++ A+D D G++ ++ Y I+  S
Sbjct: 1562 VTVTVQLEGANEYVPRFVSKLYYFEVSEAAPKGTVVGEVFASDRDGGIDGDVHYLIFGSS 1621

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPN 149
                  F+ID ++G I  +G L     E+ S+ + A + G      I EV+V   +   N
Sbjct: 1622 RK--KGFQIDKKTGKISVSGILDREKEERISLKIIAKNVGSIRGADIDEVNVNITILDAN 1679

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
               PVF    Y+V +SEG +  + V  ++
Sbjct: 1680 D-PPVFSLKVYNVQISEGVTPGTHVTFVS 1707


>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
          Length = 4587

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2547 IFTLEKLDRETPVEKVISVRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATRYEVDI 2604

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +   +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI   
Sbjct: 2605 GSNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGLE 2664

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D+G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2665 NEFFTFFVRAVDSGSPSRESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTEIDLI 2724



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ DINDN P           + +     +++++ A   D+  NAEITYSI   + 
Sbjct: 3214 TVVVSVLDINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVSRDIEANAEITYSIMSGNE 3273

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
             G  KF ID R+G I     L   +  +Y +T++A D G  S   +  VS+ V   N  S
Sbjct: 3274 HG--KFSIDSRTGAIFVIENLDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNS 3331

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF Q+TY   VSE A +  +V T+
Sbjct: 3332 PVFSQDTYTAVVSEDALLEQSVITV 3356



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 12/169 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   +L + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3092 YNLLVKATDGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDR 3151

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+    N+   +F I+  SG+I+    L   +Q  YS+T++A D G    
Sbjct: 3152 DSGLNRKISYSLV---NSVDGQFSINELSGIIQLEKPLDREQQAVYSLTLKAVDQGLPRR 3208

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI-TVSR 181
             T    V VSV+   N   PVF+   Y   VSE   I + V  +  VSR
Sbjct: 3209 LTATGTVVVSVL-DINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVSR 3256



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1547 IIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1605

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V +   +  SP
Sbjct: 1606 G-NSFTIDPILGSIKTAKELDRESQVEYDLMVKATDQGNPPMSEIASVRVFITVADNASP 1664

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             F    Y V +SE   I S V T+T    +S
Sbjct: 1665 KFTSKEYSVEISETVGIGSFVGTVTAHSQSS 1695



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 13/189 (6%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPP 58
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P     +   
Sbjct: 2975 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3029

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               +     + I+++ ATD D+  NAEITY++      G  KF ++P +G + T   L  
Sbjct: 3030 TVPEDASPGQLILQVSATDADIRSNAEITYTLL---GPGAEKFTLNPDTGELRTLAPLDR 3086

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             EQ  Y++ V+ATD GG+S Q  + V  +   N  +P F  + Y + V E     + +  
Sbjct: 3087 EEQGVYNLLVKATDGGGRSCQANL-VLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTR 3145

Query: 177  ITVSRLASG 185
            +  +   SG
Sbjct: 3146 VQATDRDSG 3154



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            +V + E LDR+  +   +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1089 VVETAERLDRE--STPHYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPE 1146

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             I+       +V IEA D D   N ++ Y I   +  G   F + P++G+I TT + +  
Sbjct: 1147 IIENSPKDVSVVHIEAFDPDSSSNDKLMYKITSGNPQGF--FSVHPKTGLITTTSRKLDR 1204

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + +
Sbjct: 1205 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRL 1253



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1232 VKILDENDNKPQFLQKFYKIRLPERERPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1291

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1292 DGNEHG--KFFIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1349

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F++ ++   V E   +   +  I+V
Sbjct: 1350 PSVGPISFEEPSFSFTVMESDPVAHMIGVISV 1381



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +     ++   + A +    + S   ++++N+ DINDN+P         + + +A
Sbjct: 3290 ENLDYESSR--EYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSEDA 3347

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F +DP  G ++ T KL+  E    
Sbjct: 3348 LLEQSVITVMADDADGPSNSHIRYSIID-GNQG-SPFTVDPTRGEVKVT-KLLDRETISG 3404

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + VS
Sbjct: 3405 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQENKPVGFSVLQLVVS 3464



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   +PP  +++  E  
Sbjct: 882  LDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKF--VPPNYRVKVREDL 939

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG ++++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 940  PEGTIIMWLEAYDPDLGQSSQVRYSLL---DHGEGHFDVDKLSGAVRIVQHLDFEKKQVY 996

Query: 123  SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G     SS   VEV V+    N   PVF        V E   +  ++ T++
Sbjct: 997  NLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFSSFVEKGVVKEDVPVGFSIMTVS 1056

Query: 179  VSRLASG 185
                 +G
Sbjct: 1057 AHDEDTG 1063



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQ------IVKIEATDNDL 80
            PVSL+      V + D+N+N     + PP+    ++ G  +        I+ + A D D 
Sbjct: 1008 PVSLSSTCYVEVEVIDVNEN-----LHPPVFSSFVEKGVVKEDVPVGFSIMTVSAHDEDT 1062

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G + E+ YSI   S  G+  FRID  +GV+ET  +L   +   Y +TV ATD G     +
Sbjct: 1063 GRDGEVRYSIRDGSGVGV--FRIDEETGVVETAERLDRESTPHYWLTVYATDRGVVPLSS 1120

Query: 139  IVEVSVV------PGPNTRSPVF 155
             VE+ +         P T  PV+
Sbjct: 1121 FVEIYIEVEDVNDNAPQTSEPVY 1143



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 12/158 (7%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     ASV VS+ V   D NDN+P L   P     ++   A  +++++
Sbjct: 2773 YQFSILARCTHDDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENLPAGSRVIQV 2830

Query: 74   EATDNDLGVNAEITYSIYHV-SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++TYS+    S   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2831 RASDLDSGTNGQVTYSLDQSQSMEVIESFAINVETGWITTLKELDHEKRDSYQIQVVASD 2890

Query: 131  TGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   S T V    V   N   P F    Y   VSE
Sbjct: 2891 HGEKVQLSSTAVVDVTVTDVNDSPPRFTAEIYKGTVSE 2928



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I+ + ATD D G N ++ Y+I   +      
Sbjct: 706 HSVNAHAPQFRSTLPTGIEVKENHPVGSSIIFMNATDLDTGFNGKLVYAISGGNEDSC-- 763

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ V  +D G   K++  +++V V+   N   P F 
Sbjct: 764 FIIDMETGMLKILSPLDRETTDKYTLNVTVSDLGIPQKAAWRLLDVRVLDA-NDNPPEFL 822

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   INS +  +
Sbjct: 823 QESYFVEVSEDKEINSEIIQV 843



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V   + + DIND+       PP+ +    A            +V++ ATD+D  
Sbjct: 2260 TGAHADVFADIIVEDINDS-------PPVFVHQSYATTLSEASVIGTSVVQVRATDSDSE 2312

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D G    SS 
Sbjct: 2313 PNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVRAVDGGMPPLSSD 2372

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F Q+ Y+  +SE A
Sbjct: 2373 VIVTVDVT-DLNDNPPLFDQHIYEARISEHA 2402



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYS+     
Sbjct: 807 LDVRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVTYSVL---- 861

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +GV++    L    Q  + + ++A D   +  Q +  V +   +   N 
Sbjct: 862 TDTDKFSIDGVTGVVKVMRPLDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVND 921

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 922 NPPKFVPPNYRVKVRE 937



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I         V  ++A D D     ++ YSI  +S
Sbjct: 2373 VIVTVDVTDLNDNPPLFDQHIYEARISEHAIHGHFVTCVKAYDADSSDVDKLDYSI--LS 2430

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ V  +D   +SS   V ++V+ G N  S
Sbjct: 2431 GNDHKNFVIDRVTGIITLSNLRRHSLKPFYSLNVSVSDGVFRSSAQ-VHITVIGG-NLHS 2488

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF Q+ Y+V ++E A +++ V  +  +   SG
Sbjct: 2489 PVFPQSEYEVELAENAPLHTLVIEVKAADGDSG 2521



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARR-QIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  + ++ ATD D+
Sbjct: 118 IVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAMRTSVARVSATDADI 177

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  YS    ++     F I P SG +  TG+L   E   Y + + A D G K
Sbjct: 178 GTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYAETKLYELEILAVDRGMK 229



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G SS T V V +    N   PVF Q
Sbjct: 1709 FDINPHSGSI-ITQKALDFETVPVYALIIQGTNMAGLSSNTTVVVHL-QDENDNLPVFTQ 1766

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1767 AEYTGLISESASINSVVLT 1785



 Score = 38.9 bits (89), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIV 71
            K  + +      GT A V   + + + D ND+ P+        +IP   +   E    I+
Sbjct: 1421 KSSYDLTVEATDGTTA-VLTQVFIKVIDTNDHRPQFSASKYEVVIPEDTVPETE----IL 1475

Query: 72   KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            +I A D D     ++ Y++   V    + KFR+DP +G + T+  L   A  Q+ +TV  
Sbjct: 1476 QISAVDKD--EKNKLIYTLQGSVDPLSVRKFRLDPATGSLFTSETLDHEAVHQHILTVMV 1533

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1534 RDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1584



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++A D D G+   ITY I  V++    +F  + R G I T  KL       +  S+ 
Sbjct: 2510 VIEVKAADGDSGIYGHITYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPVEKVISVR 2566

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+V++   A   ++V  +  S    G
Sbjct: 2567 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATRYEVDIGSNAPKGTSVIKVLASDADEG 2625



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +      F  QV         A    ++T+ + DIND  P     +     +    
Sbjct: 1833 SLDYEETRTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLYEASLLLPTY 1892

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  K  +D R+G I          +Y +T
Sbjct: 1893 RGVKVITVNATDADSSAFSQVMYSITE-GNIG-EKLFMDHRTGAITVQNTTQLRSRYELT 1950

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G   S T V+++V     ++   F  + Y   V E ++   T+A IT
Sbjct: 1951 VRASD-GRFVSFTSVKINVKESKESQLK-FTHDFYSAVVKENSTEARTLAVIT 2001


>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
          Length = 4593

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2553 IFTLEKLDRETPVEKVISVRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATRYEVDI 2610

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +   +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI   
Sbjct: 2611 GSNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGLE 2670

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D+G  S +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2671 NEFFTFFVRAVDSGSPSRESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTEIDLI 2730



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ DINDN P           + +     +++++ A   D+  NAEITYSI   + 
Sbjct: 3220 TVVVSVLDINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVSRDIEANAEITYSIMSGNE 3279

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
             G  KF ID R+G I     L   +  +Y +T++A D G  S   +  VS+ V   N  S
Sbjct: 3280 HG--KFSIDSRTGAIFVIENLDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNS 3337

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF Q+TY   VSE A +  +V T+
Sbjct: 3338 PVFSQDTYTAVVSEDALLEQSVITV 3362



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 12/169 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   +L + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3098 YNLLVKATDGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDR 3157

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+    N+   +F I+  SG+I+    L   +Q  YS+T++A D G    
Sbjct: 3158 DSGLNRKISYSLV---NSVDGQFSINELSGIIQLEKPLDREQQAVYSLTLKAVDQGLPRR 3214

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI-TVSR 181
             T    V VSV+   N   PVF+   Y   VSE   I + V  +  VSR
Sbjct: 3215 LTATGTVVVSVL-DINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVSR 3262



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 11/156 (7%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH---- 92
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI      
Sbjct: 1547 IIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGIFG 1606

Query: 93   -VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGP 148
             + N G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V +   
Sbjct: 1607 ALRNIG-NSFTIDPILGSIKTAKELDRESQVEYDLMVKATDQGNPPMSEIASVRVFITVA 1665

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +  SP F    Y V +SE   I S V T+T    +S
Sbjct: 1666 DNASPKFTSKEYSVEISETVGIGSFVGTVTAHSQSS 1701



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 13/189 (6%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPP 58
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P     +   
Sbjct: 2981 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3035

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               +     + I+++ ATD D+  NAEITY++      G  KF ++P +G + T   L  
Sbjct: 3036 TVPEDASPGQLILQVSATDADIRSNAEITYTLL---GPGAEKFTLNPDTGELRTLAPLDR 3092

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             EQ  Y++ V+ATD GG+S Q  + V  +   N  +P F  + Y + V E     + +  
Sbjct: 3093 EEQGVYNLLVKATDGGGRSCQANL-VLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTR 3151

Query: 177  ITVSRLASG 185
            +  +   SG
Sbjct: 3152 VQATDRDSG 3160



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            +V + E LDR+  +   +   V A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1089 VVETAERLDRE--STPHYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPE 1146

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             I+       +V IEA D D   N ++ Y I   +  G   F + P++G+I TT + +  
Sbjct: 1147 IIENSPKDVSVVHIEAFDPDSSSNDKLMYKITSGNPQGF--FSVHPKTGLITTTSRKLDR 1204

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + +
Sbjct: 1205 EQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRL 1253



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1232 VKILDENDNKPQFLQKFYKIRLPERERPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1291

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1292 DGNEHG--KFFIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1349

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F++ ++   V E   +   +  I+V
Sbjct: 1350 PSVGPISFEEPSFSFTVMESDPVAHMIGVISV 1381



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +     ++   + A +    + S   ++++N+ DINDN+P         + + +A
Sbjct: 3296 ENLDYESSR--EYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSEDA 3353

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F +DP  G ++ T KL+  E    
Sbjct: 3354 LLEQSVITVMADDADGPSNSHIRYSIID-GNQG-SPFTVDPTRGEVKVT-KLLDRETISG 3410

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + VS
Sbjct: 3411 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQENKPVGFSVLQLVVS 3470



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   +PP  +++  E  
Sbjct: 882  LDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKF--VPPNYRVKVREDL 939

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D DLG ++++ YS+    + G   F +D  SG +     L   ++  Y
Sbjct: 940  PEGTIIMWLEAYDPDLGQSSQVRYSLL---DHGEGHFDVDKLSGAVRIVQHLDFEKKQVY 996

Query: 123  SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G     SS   VEV V+    N   PVF        V E   +  ++ T++
Sbjct: 997  NLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFSSFVEKGVVKEDVPVGFSIMTVS 1056

Query: 179  VSRLASG 185
                 +G
Sbjct: 1057 AHDEDTG 1063



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQ------IVKIEATDNDL 80
            PVSL+      V + D+N+N     + PP+    ++ G  +        I+ + A D D 
Sbjct: 1008 PVSLSSTCYVEVEVIDVNEN-----LHPPVFSSFVEKGVVKEDVPVGFSIMTVSAHDEDT 1062

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G + E+ YSI   S  G+  FRID  +GV+ET  +L   +   Y +TV ATD G     +
Sbjct: 1063 GRDGEVRYSIRDGSGVGV--FRIDEETGVVETAERLDRESTPHYWLTVYATDRGVVPLSS 1120

Query: 139  IVEVSVV------PGPNTRSPVF 155
             VE+ +         P T  PV+
Sbjct: 1121 FVEIYIEVEDVNDNAPQTSEPVY 1143



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 12/158 (7%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     ASV VS+ V   D NDN+P L   P     ++   A  +++++
Sbjct: 2779 YQFSILARCTHDDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENLPAGSRVIQV 2836

Query: 74   EATDNDLGVNAEITYSIYHV-SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++TYS+    S   +  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2837 RASDLDSGTNGQVTYSLDQSQSMEVIESFAINVETGWITTLKELDHEKRDSYQIQVVASD 2896

Query: 131  TGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   S T V    V   N   P F    Y   VSE
Sbjct: 2897 HGEKVQLSSTAVVDVTVTDVNDSPPRFTAEIYKGTVSE 2934



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I+ + ATD D G N ++ Y+I   +      
Sbjct: 706 HSVNAHAPQFRSTLPTGIEVKENHPVGSSIIFMNATDLDTGFNGKLVYAISGGNEDSC-- 763

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ V  +D G   K++  +++V V+   N   P F 
Sbjct: 764 FIIDMETGMLKILSPLDRETTDKYTLNVTVSDLGIPQKAAWRLLDVRVLDA-NDNPPEFL 822

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   INS +  +
Sbjct: 823 QESYFVEVSEDKEINSEIIQV 843



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V   + + DIND+       PP+ +    A            +V++ ATD+D  
Sbjct: 2266 TGAHADVFADIIVEDINDS-------PPVFVHQSYATTLSEASVIGTSVVQVRATDSDSE 2318

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D G    SS 
Sbjct: 2319 PNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVRAVDGGMPPLSSD 2378

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F Q+ Y+  +SE A
Sbjct: 2379 VIVTVDVT-DLNDNPPLFDQHIYEARISEHA 2408



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYS+     
Sbjct: 807 LDVRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVTYSVL---- 861

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +GV++    L    Q  + + ++A D   +  Q +  V +   +   N 
Sbjct: 862 TDTDKFSIDGVTGVVKVMRPLDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVND 921

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 922 NPPKFVPPNYRVKVRE 937



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I         V  ++A D D     ++ YSI  +S
Sbjct: 2379 VIVTVDVTDLNDNPPLFDQHIYEARISEHAIHGHFVTCVKAYDADSSDVDKLDYSI--LS 2436

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ V  +D   +SS   V ++V+ G N  S
Sbjct: 2437 GNDHKNFVIDRVTGIITLSNLRRHSLKPFYSLNVSVSDGVFRSSAQ-VHITVIGG-NLHS 2494

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF Q+ Y+V ++E A +++ V  +  +   SG
Sbjct: 2495 PVFPQSEYEVELAENAPLHTLVIEVKAADGDSG 2527



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARR-QIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  + ++ ATD D+
Sbjct: 118 IVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAMRTSVARVSATDADI 177

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  YS    ++     F I P SG +  TG+L   E   Y + + A D G K
Sbjct: 178 GTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYAETKLYELEILAVDRGMK 229



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G SS T V V +    N   PVF Q
Sbjct: 1715 FDINPHSGSI-ITQKALDFETVPVYALIIQGTNMAGLSSNTTVVVHL-QDENDNLPVFTQ 1772

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1773 AEYTGLISESASINSVVLT 1791



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIV 71
            K  + +      GT A V   + + + D ND+ P+        +IP   +   E    I+
Sbjct: 1421 KSSYDLTVEATDGTTA-VLTQVFIKVIDTNDHRPQFSASKYEVVIPEDTVPETE----IL 1475

Query: 72   KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            +I A D D     ++ Y++   V    + KFR+DP +G + T+  L   A  Q+ +TV  
Sbjct: 1476 QISAVDKD--EKNKLIYTLQGSVDPLSVRKFRLDPATGSLFTSETLDHEAVHQHILTVMV 1533

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1534 RDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1584



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++A D D G+   ITY I  V++    +F  + R G I T  KL       +  S+ 
Sbjct: 2516 VIEVKAADGDSGIYGHITYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPVEKVISVR 2572

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+V++   A   ++V  +  S    G
Sbjct: 2573 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATRYEVDIGSNAPKGTSVIKVLASDADEG 2631



 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +      F  QV         A    ++T+ + DIND  P     +     +    
Sbjct: 1839 SLDYEETRTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLYEASLLLPTY 1898

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  K  +D R+G I          +Y +T
Sbjct: 1899 RGVKVITVNATDADSSAFSQVMYSITE-GNIG-EKLFMDHRTGAITVQNTTQLRSRYELT 1956

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G   S T V+++V     ++   F  + Y   V E ++   T+A IT
Sbjct: 1957 VRASD-GRFVSFTSVKINVKESKESQLK-FTHDFYSAVVKENSTEARTLAVIT 2007


>gi|61162135|dbj|BAD91056.1| Cj-cadherin [Caridina japonica]
          Length = 3000

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  ++  V A E  G   S  V LT+ + D+NDN P+  + P  Q   
Sbjct: 621 LAKELDFEDVRQPHIYQLVVTATEDSG-GFSTSVDLTIKVTDVNDNPPKFDL-PDYQAHN 678

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D+D G NAEI YS   VSN     FR+D + G+I     L A 
Sbjct: 679 IDEDIPIGSSILKVKARDDDSGTNAEIVYS---VSND---HFRVDNK-GIIYNRKALDAD 731

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           +    Y  TV ATD G    +    + +     N   P F Q  Y  NV E A   + V 
Sbjct: 732 DNNAYYEFTVTATDKGEPPKEGTATIRIYTKNKNDEEPKFSQQVYTPNVDENAGPYTLVT 791

Query: 176 TITVS 180
           T+  S
Sbjct: 792 TVVAS 796



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 92/193 (47%), Gaps = 18/193 (9%)

Query: 3    VVSKENLDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +  K+ LDRD P  G+  +RF V A+++ GT       + VNL DINDN P  P +    
Sbjct: 1493 IFVKKPLDRDHPK-GRPTWRFTVFAQDEGGTGLVGYADVQVNLKDINDNGPVFPQMVYYG 1551

Query: 61   --IQAGEARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIET 112
               + G     ++ + A D D    G NA++TYSI       N     F I+P +GVI+T
Sbjct: 1552 NVTENGTQGMVVMTMTAEDYDDPSEGTNAKLTYSIEKNVIDENMATPIFEIEPETGVIKT 1611

Query: 113  TGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEG 167
                +  E+   YSI V A D GG        + V    N   P F +  +  +V+ +EG
Sbjct: 1612 AVCCLDREKTPDYSIQVVAVDGGGLKGTGTASIRVR-DINDMPPRFTKEEWVTEVDETEG 1670

Query: 168  ASI-NSTVATITV 179
            A + +  + T+TV
Sbjct: 1671 ALLPDQAILTVTV 1683



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 22/189 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREK-------QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +LDRD     K+   V A +        Q T  +    + V + D+NDN P         
Sbjct: 834  SLDRD-----KYELNVTAVDDGNCCQGGQHTRHTSTAVVVVFITDVNDNKPVFKDCASYH 888

Query: 61   IQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             +  E+      ++ + ATD D GVN ++ YSI    N    KF +DP +G + TT K+ 
Sbjct: 889  AKVEESAPNGSPVITVHATDEDKGVNGQVRYSIVQQPNQKGTKFTVDPETGEV-TTNKVF 947

Query: 118  -----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                  G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV +  ++ 
Sbjct: 948  DREGEDGKFVSVTVKATDNGDPSLEGVCSFTVEITDINDNPPLFDRQKYVENVKQDTNVG 1007

Query: 172  STVATITVS 180
            + +  ++ S
Sbjct: 1008 TNILRVSAS 1016



 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 12   DPPNPGKFRFQVIAREK--QGTAASVPVSLT---VNLNDINDNAPRL--PMIPPIQIQAG 64
            DP     FRF++   +K     A    V+ +   V L DINDN P+   P I     +  
Sbjct: 1729 DPMQRSGFRFKIQVNDKGEDNDAEKYHVAYSWVKVELRDINDNKPQFVKPNIEVPVFENA 1788

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
            E  + +   +ATD D G  ++++Y+I   S+    +F ID  SG ++    L   E  ++
Sbjct: 1789 EIGKSLETFKATDPDQGGQSKVSYAIDRASDR-RRQFAID-SSGTVKIQRTLDREENPRH 1846

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            S+ + A D G   K++   + V +V   N  +P F ++
Sbjct: 1847 SVKILAIDDGLPAKTATATLTV-IVQDINDNAPRFLKD 1883



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 12/76 (15%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQA 63
            LDR+  NP +   +++A +    A +   +LTV + DINDNAPR      P++P  Q   
Sbjct: 1838 LDREE-NP-RHSVKILAIDDGLPAKTATATLTVIVQDINDNAPRFLKDYRPVLPENQ--- 1892

Query: 64   GEARRQIVKIEATDND 79
              + R+IV++ ATD+D
Sbjct: 1893 --SPRKIVEVLATDDD 1906



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 14/159 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA-RRQIVKIEATDNDLGV-NAEITYSIYHV-S 94
            ++ V L D+ND  P         +  GE    ++ ++ A D D    N E+ Y I     
Sbjct: 1197 TIYVVLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAIDKDGTYPNNEVLYRIVDSPR 1256

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD--------TGGKSSQTIVEVSV 144
            N G   + I  R+G I T  +    E+  Y++ V+A D          G+ +     + +
Sbjct: 1257 NEGRAFYEIRERTGEIFTKVEFDREEKQAYALEVEARDGAASARPNANGRPNTVTKFIRI 1316

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             +   N   P F +N Y+  V E   I  TV T+T   L
Sbjct: 1317 GIADKNDNPPFFDKNLYEAEVDENEDIQHTVLTVTAKDL 1355


>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
 gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
          Length = 4589

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 9/185 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            V + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       ++ 
Sbjct: 2549 VFTLERLDREAPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRSTK-YEVN 2605

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   +VK+ A+D D G NA++TY+I   S +      I+  +G+I T   LI  
Sbjct: 2606 VGSSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVEENLEINQLTGLITTKESLIGL 2665

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V +  P  + P F +  Y  ++SE   I + +  
Sbjct: 2666 ENEFFTFFVRAVDNGSPPKESVVPVYVKILPPEVQLPRFSEPFYTYSISEDMPIGTEIDL 2725

Query: 177  ITVSR 181
            I V  
Sbjct: 2726 IRVEH 2730



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 15/171 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIP 57
            + V  K+ LDR+     K  + +      GT +S    + V + D NDN+P   R     
Sbjct: 2977 WRVYVKKPLDREQ----KDSYLLTVTATDGTFSS-KARVEVKVLDANDNSPVCERTAYSD 3031

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             I   A   +  ++++ ATD D+  NAEITY+++    +G  KF+++P +G + T   L 
Sbjct: 3032 AIPEDALPGKL-VMQVSATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELRTLALLD 3087

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              EQ  Y + V+ATD GG+S Q  + V  +   N  +P F  + Y + V E
Sbjct: 3088 REEQAVYHLLVKATDGGGRSCQATI-VLTLEDVNDNTPEFTADPYAITVFE 3137



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITY+I  +S     KF ID ++G I     L   +   Y +TV
Sbjct: 3249 EVLQVYAASRDIEANAEITYAI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTV 3306

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V++ +   N  SPVF Q++Y   VSE A++   V TI
Sbjct: 3307 EATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPVITI 3358



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   ++ + L D+NDN P     P      +  E    + +++ATD 
Sbjct: 3094 YHLLVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+   ++    +F I+ +SG+++    L    Q  Y++T++A D G   K
Sbjct: 3154 DAGLNRKISYSLLDSADG---QFSINEQSGILQLEKHLDRELQAVYTLTLKAADQGLPRK 3210

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + T   V  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3211 LTATGTVVVSVLDINDNPPVFEYREYGATVSEDIVIGTEVLQV 3253



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D+ND++P            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1549 IIVNVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDKGRNAEVLYSI-ESGNI 1607

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V +SV    N  S
Sbjct: 1608 G-NSFTIDPILGSIKTARELDRSHQVDYDLMVKATDKGEPPMSEMTSVRISVTVADNA-S 1665

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y   +SE   I S V  ++    +S
Sbjct: 1666 PKFTSKEYSAEISEAIRIGSFVGMVSAHSQSS 1697



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP            R  + ++ A D D G NAE++YSI 
Sbjct: 1234 VKILDENDNRPQFLQKFYKIRLPEREKADGDRSAKREPLYRVIAADKDEGPNAELSYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1294 EGNEHG--RFSIEPKTGVVSSKKFSAAGEYDILSIKAIDNGRPQKSSTTRLHIEWISKPK 1351

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1352 PSLEPISFEESVFSFTVMESDPVAHMIGVISV 1383



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     AS+ VS+ V   D NDN+P L   P     ++   A  +++++
Sbjct: 2775 YQFSILARCTLDDYEVVASIDVSIQVK--DANDNSPVLESNPYEAFIVENLPAGSRVIQV 2832

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D GVN ++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2833 RASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVVASD 2892

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2893 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2930



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1149 IMENSPKDVSVVQIEAFDPDSSSSDKLTYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPE 1257



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +   +   V A +    + S   ++ +N+ DINDN+P         + + +A
Sbjct: 3292 ENLDYESSH--GYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDA 3349

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ I A D D   N+ I YSI    N G   F IDP  G I+ T  L    I+G 
Sbjct: 3350 ALEQPVITIMADDADGPSNSHILYSIIE-GNQG-SPFTIDPVRGEIKVTKPLDRETISG- 3406

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA D G         V++ V   N  +P+F ++ Y V + E   +  +V  + V
Sbjct: 3407 -YTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVV 3465

Query: 180  S 180
            +
Sbjct: 3466 T 3466



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV 
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +EV +         P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVY 1145



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+       + +   +  +    S  V L V+L+D+NDN PR   IPP   ++  E  
Sbjct: 884  LDREVQRVHYLKIEARDQATEEPWLSSTVLLKVSLDDVNDNPPRF--IPPSYSVKVREDL 941

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D D+G ++++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 942  PEGTIIMWLEAHDPDVGQSSQVRYSLL---DHGEGHFDVDKLSGAVRIVQQLDFEKKQLY 998

Query: 123  SITVQATDTGGKSSQT----IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G  +S +    +    V    N  +PVF        V E   + S+V T++
Sbjct: 999  NLTVRAKDKGKPASLSSTGYVEVEVVDVNENLHAPVFSSFVEKGTVKEDVPMGSSVMTVS 1058

Query: 179  VSRLASG 185
                 +G
Sbjct: 1059 AHDEDTG 1065



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 20/150 (13%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +NDN P        + Q  EAR          ++ ++A D D      + YSI  +S   
Sbjct: 2384 LNDNPPLF------EQQVYEARISEHAAHGHFVMCVKACDADRSDLDRLEYSI--LSGND 2435

Query: 98   LHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F ID  +G+I  +   +      YS+ V  +D   +SS   V V+V+ G N  SPVF
Sbjct: 2436 HKSFVIDGETGIITLSNPRRHTLKPFYSLNVSVSDGVFRSSAR-VNVTVMGG-NLHSPVF 2493

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2494 HQNEYEVELAENAPLHTLVVQVKATDRDSG 2523



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP   +     ++  E +    +I+++EATD DLG +  +TY+I     
Sbjct: 809 LDVTVLDANDNAPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPSGHVTYAIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV----QATDTGGKSSQTIVEVSVVPGPN 149
           T   KF ID  +GV++    L    Q  + + +    QAT+    SS  +++VS +   N
Sbjct: 864 TDTEKFAIDRVTGVVKIIQPLDREVQRVHYLKIEARDQATEEPWLSSTVLLKVS-LDDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F   +Y V V E
Sbjct: 923 DNPPRFIPPSYSVKVRE 939



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           VI   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 120 VIKAVEKVTDAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 179

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           G N E  YS    ++     F I P SGV+  TG+L  +  ++Y + + A D G K
Sbjct: 180 GTNGEFYYSFKDRTDM----FAIHPTSGVVVLTGRLDVLETQRYELEILAVDRGMK 231



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I+ + ATD D G N ++ Y+I   ++     
Sbjct: 708 HSVNAHAPQFRGSLPTGIEVKEDLPVGASILFMNATDLDSGFNGKLVYAISGGNDDSC-- 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  +G+++    L     ++Y++ +   D G   +++  +++V+V+   N  +P F 
Sbjct: 766 FTVDMETGMLKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDA-NDNAPEFL 824

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 825 QESYFVEVSEDKEINSEI 842



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            K  + +      GT+ ++   + + + D ND+ P+         +P    +  E   +I+
Sbjct: 1423 KSSYNLTVEATDGTS-TILTQVLIKVIDTNDHRPQFSTSKYEVSVP----EDTEPETEIL 1477

Query: 72   KIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            +I A D D     ++ Y++   +    L KFR+DP +G + T+ KL   A  Q+ +TV  
Sbjct: 1478 QISAVDRD--EKNKLIYTLQSSIDPASLKKFRLDPATGALYTSEKLDHEAIHQHVLTVMV 1535

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D      +    + V V   N  SP F  ++Y+  V E A++ S V  +T
Sbjct: 1536 RDQDVPVKRNFARIIVNVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVT 1586



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +V+++ATD D G+   +TY +  V++    +F ++   G + T  +L     A +  S+ 
Sbjct: 2512 VVQVKATDRDSGIYGHLTYHL--VNDFAKDRFYVN-DGGQVFTLERLDREAPAEKVISVR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VNV   A+  ++V  +  S    G
Sbjct: 2569 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRSTKYEVNVGSSAAKGTSVVKVFASDADEG 2627



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 19/159 (11%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q         A      I+++ ATD+D  
Sbjct: 2262 TGAHAEVFVDIVVEDINDN-------PPVFVQQSYSTTLSEASVIGAPILQVRATDSDSE 2314

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQT 138
             N  I+Y +    +     F ID  +G+I     L     +Q+ + V+A D G    S  
Sbjct: 2315 PNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRALDYEQFQQHKLLVRAVDGGMPPLSSD 2374

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V    V   N   P+F+Q  Y+  +SE A+    V  +
Sbjct: 2375 VVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGHFVMCV 2413



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T + +  E    Y++TVQ T+  G S+ T V V +    N   P F +
Sbjct: 1711 FNINPHSGSI-VTQRALDFETLPIYTLTVQGTNMAGLSTNTTVVVHI-QDENDNPPAFTR 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE AS+NS V T
Sbjct: 1769 AEYSGFISESASVNSVVLT 1787



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 8/174 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +      F  QV         A    ++TV++ DIND  P     +     +    
Sbjct: 1835 SLDYEETRVFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEASLLLPTY 1894

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
                ++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1895 KGVNVITVNATDADSRAFSQLIYSITK-GNIG-EKFSMDHKTGTIAIQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   V ++V    +  SP+ F Q+ Y   V E ++   T+A IT
Sbjct: 1953 VRASD-GRFTSVASVRINV--KESRESPLKFTQDAYSAVVKENSTEAKTLAVIT 2003


>gi|62510878|sp|Q5DRC6.1|PCDB8_PANTR RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; Flags:
           Precursor
          Length = 801

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|397496709|ref|XP_003819172.1| PREDICTED: protocadherin-16 [Pan paniscus]
          Length = 3300

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 542 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 599

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 600 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 653

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  +TV ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 654 ASLDYELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 713

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 714 GTCFLQVTATDADSG 728



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2346 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2400

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2401 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2456

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F  + Y V V+E     ST+ T+
Sbjct: 2457 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLSHYRVAVTEDLPPGSTLLTL 2506



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2141 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2199

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2200 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2257

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2258 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2312



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ A +    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1823 FQLRIEAWDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1881

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1882 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAA 1938

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1939 AGPLSTTVSVTITVRDVNDHAPTF 1962



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1637 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY--- 1688

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
                     F +DP +GV+ T   L   EQ  I  TV A D G     T V + V V   
Sbjct: 1689 --GGVSSESFSLDPDTGVLTTLRALDREEQEEIILTVYAQDRGSPPRLTHVTIRVAVEDE 1746

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1747 NDHAPTFGSAHLSLEVPEG 1765



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 327 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 383

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D GVN  +TY I    + G   F ID  +G+++    L
Sbjct: 384 VSESLAPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 440

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 441 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 500

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 501 PGQLVARISVS 511



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 1002 VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 1054

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 1055 AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHDLELEARDGGSPPRTSHFRLRVVVQDVGTR 1114

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 1115 GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1142



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNA 84
            ++ GTA     ++ V++ + N+++PRL   P     A        + ++ ATD D G N 
Sbjct: 1204 QQTGTA-----TVRVSILNQNEHSPRLSEDPTFLAMAENQPPGTSVGRVFATDRDSGPNG 1258

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIV 140
             +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ  D G   +S+   V
Sbjct: 1259 RLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTV 1317

Query: 141  EVSVVPGPNTRSPVFQQ 157
             V+V+   N  SP F Q
Sbjct: 1318 HVAVL-DLNDNSPTFLQ 1333



 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2674 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2730

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2731 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2784

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2785 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2828



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1737 VTIRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1796

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1797 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEAWDGGQPALSATLLLTVTVLDANDHA 1854

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1855 PAFPVPAYSVEVPE 1868



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQA 128
            + + A D DLG  A ++Y +   ++ G   FR+   +G +     L   +  ++ +TV A
Sbjct: 1567 LHVVARDPDLGEAARVSYRL---ASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVA 1623

Query: 129  TDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +D G   +S+  ++ VSV    N  +P FQQ  Y V + E +   +++ T+
Sbjct: 1624 SDHGSPPRSATQVLTVSVA-DVNDEAPTFQQQEYSVLLRENSPPGTSLLTL 1673


>gi|195118202|ref|XP_002003629.1| GI18018 [Drosophila mojavensis]
 gi|193914204|gb|EDW13071.1| GI18018 [Drosophila mojavensis]
          Length = 651

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 8/182 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDNAP +  +P + 
Sbjct: 473 YLVIVNLPLDREATS--NYTLSVVATDKGTPPLHATKSIFLRVTDVNDNAPEMCTMPTV- 529

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           ++  +    ++++ A D D G NA ++Y++    +T    F+ID ++G+I T   +    
Sbjct: 530 MEVADPGTSVLQVMARDRDEGSNAALSYALADTPDTHAQWFQIDAQTGLITTRSHIDCET 589

Query: 121 Q--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           +    +TV A D GG+   S T   +  +   N   P+F Q+ Y+V+V+E   +   +  
Sbjct: 590 EPVPQLTVIARD-GGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILK 648

Query: 177 IT 178
           ++
Sbjct: 649 VS 650


>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
          Length = 4589

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 9/185 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            V + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       ++ 
Sbjct: 2549 VFTLERLDREAPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRSTK-YEVN 2605

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   +VK+ A+D D G NA++TY+I   S +      I+  +G+I T   LI  
Sbjct: 2606 VGSSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVEENLEINQLTGLITTKESLIGL 2665

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V +  P  + P F +  Y  ++SE   I + +  
Sbjct: 2666 ENEFFTFFVRAVDNGSPPKESVVPVYVKILPPEVQLPRFSEPFYTYSISEDMPIGTEIDL 2725

Query: 177  ITVSR 181
            I V  
Sbjct: 2726 IRVEH 2730



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 15/171 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIP 57
            + V  K+ LDR+     K  + +      GT +S    + V + D NDN+P   R     
Sbjct: 2977 WRVYVKKPLDREQ----KDSYLLTVTATDGTFSS-KARVEVKVLDANDNSPVCERTAYSD 3031

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             I   A   +  ++++ ATD D+  NAEITY+++    +G  KF+++P +G + T   L 
Sbjct: 3032 AIPEDALPGKL-VMQVSATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELRTLALLD 3087

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              EQ  Y + V+ATD GG+S Q  + V  +   N  +P F  + Y + V E
Sbjct: 3088 REEQAVYHLLVKATDGGGRSCQATI-VLTLEDVNDNTPEFTADPYAITVFE 3137



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITY+I  +S     KF ID ++G I     L   +   Y +TV
Sbjct: 3249 EVLQVYAASRDIEANAEITYAI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTV 3306

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V++ +   N  SPVF Q++Y   VSE A++   V TI
Sbjct: 3307 EATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPVITI 3358



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   ++ + L D+NDN P     P      +  E    + +++ATD 
Sbjct: 3094 YHLLVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+   ++    +F I+ +SG+++    L    Q  Y++T++A D G   K
Sbjct: 3154 DAGLNRKISYSLLDSADG---QFSINEQSGILQLEKHLDRELQAVYTLTLKAADQGLPRK 3210

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + T   V  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3211 LTATGTVVVSVLDINDNPPVFEYREYGATVSEDIVIGTEVLQV 3253



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D+ND++P            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1549 IIVNVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDKGRNAEVLYSI-ESGNI 1607

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V +SV    N  S
Sbjct: 1608 G-NSFTIDPILGSIKTARELDRSHQVDYDLMVKATDKGEPPMSEMTSVRISVTVADNA-S 1665

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y   +SE   I S V  ++    +S
Sbjct: 1666 PKFTSKEYSAEISEAIRIGSFVGMVSAHSQSS 1697



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP            R  + ++ A D D G NAE++YSI 
Sbjct: 1234 VKILDENDNRPQFLQKFYKIRLPEREKADGDRSAKREPLYRVIAADKDEGPNAELSYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1294 EGNEHG--RFSIEPKTGVVSSKKFSAAGEYDILSIKAIDNGRPQKSSTTRLHIEWISKPK 1351

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1352 PSLEPISFEESVFSFTVMESDPVAHMIGVISV 1383



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     AS+ VS+ V   D NDN+P L   P     ++   A  +++++
Sbjct: 2775 YQFSILARCTLDDYEVVASIDVSIQVK--DANDNSPVLESNPYEAFIVENLPAGSRVIQV 2832

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D GVN ++ YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2833 RASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVVASD 2892

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2893 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2930



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1149 IMENSPKDVSVVQIEAFDPDSSSSDKLTYRITSGNPQGF--FSIHPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPE 1257



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +   +   V A +    + S   ++ +N+ DINDN+P         + + +A
Sbjct: 3292 ENLDYESSH--GYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDA 3349

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ I A D D   N+ I YSI    N G   F IDP  G I+ T  L    I+G 
Sbjct: 3350 ALEQPVITIMADDADGPSNSHILYSIIE-GNQG-SPFTIDPVRGEIKVTKPLDRETISG- 3406

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA D G         V++ V   N  +P+F ++ Y V + E   +  +V  + V
Sbjct: 3407 -YTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVV 3465

Query: 180  S 180
            +
Sbjct: 3466 T 3466



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV 
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGVGV--FRIDEETGVIETSDRLDRESTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +EV +         P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVY 1145



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+       + +   +  +    S  V L V+L+D+NDN PR   IPP   ++  E  
Sbjct: 884  LDREVQRVHYLKIEARDQATEEPWLSSTVLLKVSLDDVNDNPPRF--IPPSYSVKVREDL 941

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D D+G ++++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 942  PEGTIIMWLEAHDPDVGQSSQVRYSLL---DHGEGHFDVDKLSGAVRIVQQLDFEKKQLY 998

Query: 123  SITVQATDTGGKSSQT----IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G  +S +    +    V    N  +PVF        V E   + S+V T++
Sbjct: 999  NLTVRAKDKGKPASLSSTGYVEVEVVDVNENLHAPVFSSFVEKGTVKEDVPMGSSVMTVS 1058

Query: 179  VSRLASG 185
                 +G
Sbjct: 1059 AHDEDTG 1065



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 20/150 (13%)

Query: 46   INDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +NDN P        + Q  EAR          ++ ++A D D      + YSI  +S   
Sbjct: 2384 LNDNPPLF------EQQVYEARISEHAAHGHFVMCVKACDADRSDLDRLEYSI--LSGND 2435

Query: 98   LHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F ID  +G+I  +   +      YS+ V  +D   +SS   V V+V+ G N  SPVF
Sbjct: 2436 HKSFVIDGETGIITLSNPRRHTLKPFYSLNVSVSDGVFRSSAR-VNVTVMGG-NLHSPVF 2493

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2494 HQNEYEVELAENAPLHTLVVQVKATDRDSG 2523



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP   +     ++  E +    +I+++EATD DLG +  +TY+I     
Sbjct: 809 LDVTVLDANDNAPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGPSGHVTYAIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV----QATDTGGKSSQTIVEVSVVPGPN 149
           T   KF ID  +GV++    L    Q  + + +    QAT+    SS  +++VS +   N
Sbjct: 864 TDTEKFAIDRVTGVVKIIQPLDREVQRVHYLKIEARDQATEEPWLSSTVLLKVS-LDDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F   +Y V V E
Sbjct: 923 DNPPRFIPPSYSVKVRE 939



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           VI   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 120 VIKAVEKVTDAEARAKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 179

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           G N E  YS    ++     F I P SGV+  TG+L  +  ++Y + + A D G K
Sbjct: 180 GTNGEFYYSFKDRTDM----FAIHPTSGVVVLTGRLDVLETQRYELEILAVDRGMK 231



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I+ + ATD D G N ++ Y+I   ++     
Sbjct: 708 HSVNAHAPQFRGSLPTGIEVKEDLPVGASILFMNATDLDSGFNGKLVYAISGGNDDSC-- 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  +G+++    L     ++Y++ +   D G   +++  +++V+V+   N  +P F 
Sbjct: 766 FTVDMETGMLKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDA-NDNAPEFL 824

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 825 QESYFVEVSEDKEINSEI 842



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 17/171 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            K  + +      GT+ ++   + + + D ND+ P+         +P    +  E   +I+
Sbjct: 1423 KSSYNLTVEATDGTS-TILTQVLIKVIDTNDHRPQFSTSKYEVSVP----EDTEPETEIL 1477

Query: 72   KIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            +I A D D     ++ Y++   +    L KFR+DP +G + T+ KL   A  Q+ +TV  
Sbjct: 1478 QISAVDRD--EKNKLIYTLQSSIDPASLKKFRLDPATGALYTSEKLDHEAIHQHVLTVMV 1535

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D      +    + V V   N  SP F  ++Y+  V E A++ S V  +T
Sbjct: 1536 RDQDVPVKRNFARIIVNVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVT 1586



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +V+++ATD D G+   +TY +  V++    +F ++   G + T  +L     A +  S+ 
Sbjct: 2512 VVQVKATDRDSGIYGHLTYHL--VNDFAKDRFYVN-DGGQVFTLERLDREAPAEKVISVR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VNV   A+  ++V  +  S    G
Sbjct: 2569 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRSTKYEVNVGSSAAKGTSVVKVFASDADEG 2627



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 19/159 (11%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q         A      I+++ ATD+D  
Sbjct: 2262 TGAHAEVFVDIVVEDINDN-------PPVFVQQSYSTTLSEASVIGAPILQVRATDSDSE 2314

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQT 138
             N  I+Y +    +     F ID  +G+I     L     +Q+ + V+A D G    S  
Sbjct: 2315 PNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRALDYEQFQQHKLLVRAVDGGMPPLSSD 2374

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V    V   N   P+F+Q  Y+  +SE A+    V  +
Sbjct: 2375 VVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGHFVMCV 2413



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T + +  E    Y++TVQ T+  G S+ T V V +    N   P F +
Sbjct: 1711 FNINPHSGSI-VTQRALDFETLPIYTLTVQGTNMAGLSTNTTVVVHI-QDENDNPPAFTR 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE AS+NS V T
Sbjct: 1769 AEYSGFISESASVNSVVLT 1787



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 8/174 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +      F  QV         A    ++TV++ DIND  P     +     +    
Sbjct: 1835 SLDYEETRVFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEASLLLPTY 1894

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
                ++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1895 KGVNVITVNATDADSRAFSQLIYSITK-GNIG-EKFSMDHKTGTIAIQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S   V ++V    +  SP+ F Q+ Y   V E ++   T+A IT
Sbjct: 1953 VRASD-GRFTSVASVRINV--KESRESPLKFTQDAYSAVVKENSTEAKTLAVIT 2003


>gi|119582380|gb|EAW61976.1| protocadherin beta 8 [Homo sapiens]
          Length = 801

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|449691455|ref|XP_004212679.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
           partial [Hydra magnipapillata]
          Length = 898

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 19/187 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y+ +   + DR+      + F V A + + T +S   ++ + + D+ND AP+    P ++
Sbjct: 6   YVNIWLMHFDRE--QKAMYTFTVYAFDGERTGSS---TIKIIITDVNDEAPKFNDGPYLR 60

Query: 61  I-QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           + Q  +    IV  + ATD D G N+ ITYS+   +     +F IDP +G+I T+ K++ 
Sbjct: 61  VVQENQKEGAIVGYVTATDQDEGENSIITYSLLQSA----ERFVIDPNTGLIRTS-KVLD 115

Query: 119 GEQ-----YSITVQATDTGGKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
            E      ++I V ATD GGK+S T  VEV + V   N + P F    Y+  + E   I 
Sbjct: 116 RESDKFNNFTIIVAATDHGGKNSLTSSVEVIILVTDANDQYPYFVPKVYEATLLECTFIG 175

Query: 172 STVATIT 178
             V T+T
Sbjct: 176 DHVTTVT 182



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 20/183 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           L+ + + LDR+      F   V A +  G  + +  V + + + D ND  P    +P + 
Sbjct: 107 LIRTSKVLDRESDKFNNFTIIVAATDHGGKNSLTSSVEVIILVTDANDQYPYF--VPKVY 164

Query: 61  ----IQAGEARRQIVKIEATDNDL--GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
               ++       +  + A D+D    VN E+ YSI   S     +FRIDP +G+I    
Sbjct: 165 EATLLECTFIGDHVTTVTAKDDDEINTVNTELIYSI--TSGNTPRRFRIDPDTGLITVAH 222

Query: 115 KLIAGEQ--YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +L   ++  Y + +   D G     GK + T+    ++   N  SP F+  TY  +V E 
Sbjct: 223 RLDYEKEKRYDLYISVRDKGLPQLIGKENATV--TVLINDCNDNSPQFELPTYQGDVKED 280

Query: 168 ASI 170
             I
Sbjct: 281 VKI 283


>gi|333440480|ref|NP_061993.2| protocadherin beta-8 precursor [Homo sapiens]
 gi|145559514|sp|Q9UN66.3|PCDB8_HUMAN RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; AltName:
           Full=Protocadherin-3I; Flags: Precursor
          Length = 801

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
            domestica]
          Length = 4550

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 23/192 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+         +++A++  G  A   V+  V L D NDNAP        Q +
Sbjct: 2511 IFTSEKLDRETAGEKVITIRLMAKDTGGKVAFCTVN--VILTDDNDNAP--------QFR 2560

Query: 63   AGEARRQI----------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            A + R  I          +K+ A+D D G NA+ITYSI   S +      I+   G+I T
Sbjct: 2561 ATKYRVNIGSDAPKGTSVIKVLASDADEGSNADITYSIEADSESVQENLEINRLFGIITT 2620

Query: 113  TGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
               LI    E ++  V+A D G    +++V V V +  P T  P F +  Y   VSE   
Sbjct: 2621 KESLIGLENEVFTFFVRAVDGGSPPKESVVPVYVKILPPETPLPKFSEPFYTYTVSEDLP 2680

Query: 170  INSTVATITVSR 181
            I S + TI V  
Sbjct: 2681 IGSEIDTIRVDH 2692



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 12/170 (7%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQ 62
            ++NLD +      ++F VIA+     +  V  V +++ + D+NDN+P L   P     ++
Sbjct: 2726 EKNLDHE--TTKWYQFSVIAQSTHEDSEVVSFVDISIQVKDVNDNSPVLESNPYEAFIVE 2783

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI--AG 119
                  ++++++ATD D G N ++ YS+    +   +  F ID  +G I T  +L     
Sbjct: 2784 NLPGGSRVIQVKATDLDSGANGQVLYSLDQSQSLDVIESFAIDMETGWITTLKELDHEKR 2843

Query: 120  EQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++Y ITV A+D G K   SS  +VE+SV    N   P F    Y   VSE
Sbjct: 2844 DKYHITVVASDYGEKVQLSSTAVVEISVT-DVNDNPPRFTAEIYKGTVSE 2892



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P           P  +  G    +++++ A   D+  NAEITY+I  
Sbjct: 3178 TVVVSVLDINDNPPVFEYREYGATVPEDVLVG---TEVLQVYAASRDIEANAEITYAI-- 3232

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID  +G I     L   +   Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3233 ISGNEHGKFSIDATTGAIFIIDHLDYESSHDYYLTVEATDGGTPSLSDVATVNVNVTDIN 3292

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+ Y   +SE A +  ++ T+
Sbjct: 3293 DNTPVFSQDMYTAVISEDAILEQSIVTV 3320



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 17/153 (11%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + + G  R  I ++ ATD D G NAEI+YSI 
Sbjct: 1231 VKILDENDNKPQFLQKFYKIRLPERDKPERERGAKREPIYRVIATDKDEGPNAEISYSIE 1290

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-TVQATDTG--GKSSQTIVEVSVV--P 146
                 G  KF I+P++GV+ ++ K     +Y I +++A D G   KSS   + +  +  P
Sbjct: 1291 DGDEHG--KFFIEPKTGVV-SSKKFSGAREYDILSIKAVDNGRPQKSSTARLHIEWISKP 1347

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             P+     F++  +   V E   +   +  I+V
Sbjct: 1348 KPSLEPISFEEPYFSFTVMESDPVAHMIGVISV 1380



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LDR+      +   V A ++     S    + + + D+NDNAP+   P+  P 
Sbjct: 1088 VIETAEKLDRE--TVSHYWLTVFATDQGVVPLSSFTEIYIEIEDVNDNAPQTSEPVYYPE 1145

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1146 VMENSPKDVSVVQIEAFDPDSSSSDKLTYKITSGNPQGF--FAIHPKTGLITTTSRKLDR 1203

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1204 EQQDEHILEVTVTDNGNPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1254



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G      +S+   L D+NDNAP     P      +  E +  + +++ATD 
Sbjct: 3056 YNLLVQATDGGGRFCQMSVLFTLEDVNDNAPEFSADPYAITVFENTEPKTPLTRVQATDA 3115

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+    N+   +F ID  SG+I     L    Q  Y++ ++A D G    
Sbjct: 3116 DAGLNHKISYSLV---NSADGQFSIDESSGIIRLEKPLDRELQAVYNLILKAVDQGLPRR 3172

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   V E   + + V  +
Sbjct: 3173 LTATGTVVVSVL-DINDNPPVFEYREYGATVPEDVLVGTEVLQV 3215



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            VN++D ND+AP        Q +  E+      ++++ A D D G NAE+ YSI    N G
Sbjct: 1512 VNVSDTNDHAPWFTS-SSYQGRVYESAAVGSVVLQVTALDKDKGENAEVLYSI-ESGNIG 1569

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
             + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V + V    N   P
Sbjct: 1570 -NSFTIDPILGSIKTAKELDRSSQGEYDLMVKATDKGNPPMSEMTSVHIFVTISDNA-IP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F    Y   +SE ASI S +  +
Sbjct: 1628 RFTSKEYSAEISESASIGSFIGIV 1651



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +   ++ ++   + V + D NDN+P         
Sbjct: 2939 WKVYVKKPLDREKRD--SYLLTITATDGAFSSKAI---VEVKVLDANDNSPICEKSAYSD 2993

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + I+++ A D D+  NAEITY++   S  G  KF+I+  +G ++T  
Sbjct: 2994 TIPEDTVPG----KLIMQVSAIDADIRSNAEITYTL---SGPGAEKFKINADTGELKTLA 3046

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   +Q  Y++ VQATD GG+  Q  V +  +   N  +P F  + Y + V E
Sbjct: 3047 PLDREQQAVYNLLVQATDGGGRFCQMSV-LFTLEDVNDNAPEFSADPYAITVFE 3099



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV++ D+NDN P    P+      +       +  ++A D D     ++ YSI  +S  
Sbjct: 2339 VTVHVTDLNDNPPLFDQPLYEAKISEQAPHGHFVTCVKAYDADSSDTDKLEYSI--LSGN 2396

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
                F ID ++G+I  +   +      YS+ V  +D   +SS   VE+ V+   N  SPV
Sbjct: 2397 EQKNFAIDSKTGIITLSNLRRQTLKPFYSVNVSVSDGVFRSSSQ-VEIIVIQA-NLHSPV 2454

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F QN Y+V ++E A + + V  +  +   SG
Sbjct: 2455 FMQNEYEVELAENAPLQTLVVEVKATDEDSG 2485



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY-SIT 125
            +V+++ATD D G+  +ITY I  V++    +F  + R G I T+ KL    AGE+  +I 
Sbjct: 2474 VVEVKATDEDSGIYGQITYHI--VNDFAKDRFYTNER-GQIFTSEKLDRETAGEKVITIR 2530

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A DTGGK +   V V ++   N  +P F+   Y VN+   A   ++V  +  S    G
Sbjct: 2531 LMAKDTGGKVAFCTVNV-ILTDDNDNAPQFRATKYRVNIGSDAPKGTSVIKVLASDADEG 2589



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 21/169 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            F   V   E+   +    V + V++ D NDNAP    LP    +++ A +    I  + A
Sbjct: 2009 FDVVVEVTEEHKPSVMAHVVVRVSVEDQNDNAPVFVNLPYYAAVKVDA-DVGHIIRSVTA 2067

Query: 76   TDNDLGVNAEITYSI--YHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATD 130
             D D+G N E+ Y +  +H        F+I P SG I    K       ++Y IT+ A D
Sbjct: 2068 VDRDIGRNGEVHYYLKEHH------EHFQIGP-SGEISLKKKFEPDTLNKEYLITIVAKD 2120

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             G    S++ +V ++V+   N   PVF++  Y   + E   ++S V  +
Sbjct: 2121 GGDPAFSAEVVVPITVM---NKAMPVFEKAFYSAEIPENIQLHSPVVHV 2166



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     I+  E R    +I+++EA D DLG N E+ Y  Y +++
Sbjct: 809 LDIRVLDANDNKPEF-LQESYFIEVSEDREPYSEIIQVEAVDKDLGPNGEVKY--YLLTD 865

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +G+++  G L    Q  + + ++A D      Q    V +   +   N 
Sbjct: 866 TD--KFSIDSETGIVKVVGPLDREMQHVHFLKIEARDQAETEPQLFSTVLLKVSLEDVND 923

Query: 151 RSPVFQQNTYDVNVSE 166
             P F  + Y V V E
Sbjct: 924 NPPKFIPSNYLVKVRE 939



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 10/130 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + IN +AP+     P  I+  E       I+ + ATD D G N+++ Y+I   ++     
Sbjct: 708 HSINAHAPQFRSSLPTSIEVKENYPVGSNIILVNATDLDSGFNSKLVYAISGGNDDSC-- 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L   A E+Y++ +   D G   K+S  ++++ V+   N   P F 
Sbjct: 766 FMIDLETGMLKVLSPLDREATEKYTLNITVYDLGIPQKASWRLLDIRVLDA-NDNKPEFL 824

Query: 157 QNTYDVNVSE 166
           Q +Y + VSE
Sbjct: 825 QESYFIEVSE 834



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 16/144 (11%)

Query: 45   DINDNAPRLPM------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TG 97
            D ND+ P+  M      IP   +   E    I++I ATD D     ++ Y++   ++   
Sbjct: 1410 DTNDHRPQFSMSKYEVLIPEDTMPDTE----ILQISATDKD--EKNKLIYTLQSSTDPLS 1463

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
            L KFR+DP +G + T  KL   A  Q+ +TV   D      ++   V V V   N  +P 
Sbjct: 1464 LXKFRLDPATGSLYTAEKLDHEAVHQHVLTVMVRDQDVPVKRSFARVIVNVSDTNDHAPW 1523

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F  ++Y   V E A++ S V  +T
Sbjct: 1524 FTSSSYQGRVYESAAVGSVVLQVT 1547



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 10/146 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEIT 87
            G  A V V + V   D+NDN P       +    +A      +V + ATD D   N  I+
Sbjct: 2224 GVHAEVFVDIIVE--DVNDNPPVFTQQSYVTTLSEATVMGTSVVHVWATDTDSAPNRGIS 2281

Query: 88   YSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEV 142
            Y ++ + S +    F ID  SG+I     L   E  ++ + V+A D+G    SS  IV V
Sbjct: 2282 YHLFGNHSKSPDQYFHIDSSSGLISLVRTLDYEETQRHELLVRAVDSGMPPLSSDAIVTV 2341

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGA 168
             V    N   P+F Q  Y+  +SE A
Sbjct: 2342 HVT-DLNDNPPLFDQPLYEAKISEQA 2366



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+ID   GVIET  KL       Y +TV 
Sbjct: 1051 VMTVSAHDEDTGRDGEIRYSIRDGSGVGV--FKIDEEKGVIETAEKLDRETVSHYWLTVF 1108

Query: 128  ATDTG----GKSSQTIVEVSVV--PGPNTRSPVF 155
            ATD G       ++  +E+  V    P T  PV+
Sbjct: 1109 ATDQGVVPLSSFTEIYIEIEDVNDNAPQTSEPVY 1142



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 12/166 (7%)

Query: 19   FRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARR-QIVKI 73
            F+F V   +  GT    A    ++T+ + DIND  P    M+    +     R  +++ +
Sbjct: 1805 FQFTVQVHD-MGTPRLFAEYAANVTIRVVDINDCPPVFSKMLYEASVLLPTYRGVKVITV 1863

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
             ATD D    +++ YSI    N G  KF I+P++G I          +Y ++V+A+D G 
Sbjct: 1864 NATDADSLAFSQLMYSIPE-GNIG-EKFLINPKTGTITVQNTTQLRSRYELSVRASD-GR 1920

Query: 134  KSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
             +S   V+++V    +  +P+ F QN+Y   V E ++   T+A IT
Sbjct: 1921 FTSHASVKINV--KESKENPLKFTQNSYSARVRENSTEPRTIAVIT 1964



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGV+  TG+L   E   Y +
Sbjct: 166 RTSIARVSATDADIGTNGEFYYSFKERTDM----FAIHPTSGVVVLTGRLDYAETKLYEM 221

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 222 EILAVDRGMK 231



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI  T K +  E    YS+ VQ T+  G S+ T V V +    N  +PVF Q
Sbjct: 1672 FAINPNSGVI-ITQKALDFETLPFYSLIVQGTNMAGLSANTTVWVHL-QDENDNAPVFLQ 1729

Query: 158  NTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
              Y   +SE A I+S V T     L    A  +KE N+
Sbjct: 1730 ARYTGLISESAPISSVVLTDKNVPLVIRAADADKESNA 1767


>gi|223460164|gb|AAI36802.1| Protocadherin beta 8 [Homo sapiens]
          Length = 801

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|157115805|ref|XP_001658290.1| cadherin [Aedes aegypti]
 gi|108883460|gb|EAT47685.1| AAEL001196-PA [Aedes aegypti]
          Length = 1653

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 15/171 (8%)

Query: 9   LDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAG 64
           L+RDPP+ G+  ++F V A+++ G        + + L DINDNAP  P  +      + G
Sbjct: 146 LNRDPPH-GRPLWKFTVFAQDEGGEGLVGFTEVQIKLKDINDNAPSFPQGIYYGNVTENG 204

Query: 65  EARRQIVKIEATDN---DLGVNAEITYSIYHVS---NTGLHKFRIDPRSGVIETTGKLIA 118
                ++ I+A DN   D G +A+I YSI   +    TGL  F I+P +GVI T    + 
Sbjct: 205 TVGMYVMTIKAQDNDDVDEGTHAKIVYSIEKNAIEEETGLPIFDINPDTGVITTAVCCLD 264

Query: 119 GEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YS+ + ATD GG        +  V   N   P F ++ + V V E
Sbjct: 265 REKTPDYSLQIVATDGGGLKGTGTASIK-VKDLNDMPPHFTKDEWFVEVEE 314



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLT-----VNLNDINDNAPRL--PMIPPIQIQAG 64
           DP     FRF++   + +G   +    +      V L DINDN PR   P +     +  
Sbjct: 376 DPMQINGFRFRIQVTDNEGINDTDKYHVDHSWVIVKLKDINDNTPRFRRPHMEAYTSEND 435

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI-DPRSGVIETTGKLIAGEQYS 123
           E  + +V  +A D D    ++ITY I   ++    +F I D  +  I+      A  +Y+
Sbjct: 436 EVGKTLVSFKAIDIDKAGKSKITYMINRATDRK-RQFSISDEGTVTIQRQLDREAISKYN 494

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           + + A D G         ++V V   N  +PVF +
Sbjct: 495 LEILAIDDGVPPRTATATLTVEVKDVNDNAPVFAE 529



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)

Query: 38  SLTVNLNDINDNAPRLPMIP-PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI--- 90
           ++ VN+ D+NDN P         QI   + R   ++++++ A+D D+   + I Y +   
Sbjct: 60  TVLVNVKDVNDNPPVFERSSYRTQITEEDDRGLPKRVMRVTASDADVERPSNIIYFLTGP 119

Query: 91  -YHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYSITVQATDTGGKSSQTIVEVSV 144
              + N     F I+  +G I     L          +  TV A D GG+      EV +
Sbjct: 120 GIDIENPSESNFDINKATGEIFVLKPLNRDPPHGRPLWKFTVFAQDEGGEGLVGFTEVQI 179

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +   N  +P F Q  Y  NV+E  ++   V TI
Sbjct: 180 KLKDINDNAPSFPQGIYYGNVTENGTVGMYVMTI 213


>gi|9965297|gb|AAG10031.1|AF282973_2 protocadherin-beta8 [Homo sapiens]
          Length = 610

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 4   LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 60

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 61  ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 120

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 121 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 178

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 179 SVSDLDSG 186


>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
          Length = 3258

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 17/196 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----- 55
           YL+   + LDR+  +   +  +V A +          +  + + DINDN P         
Sbjct: 398 YLICVDQLLDREERD--SYDLRVTATDSGTPPLRAESTFVLQVIDINDNPPLFDQQEYKQ 455

Query: 56  -IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            IP + +  G     ++++ A D D G N E+ YSI H  +T    F IDP +G+I T  
Sbjct: 456 SIPEV-VYPGSF---VLQVTARDKDQGPNGEVQYSIVHSHDTHSSWFAIDPATGIITTAA 511

Query: 115 KLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            L   +  Q  +TV ATD G    SS  +V V+ +   N   PVF+ N Y+V++ E   +
Sbjct: 512 PLDYEKDPQPQLTVLATDRGTPALSSSAVVLVA-LQDVNDNEPVFRSNFYNVSLKENTPV 570

Query: 171 NSTVATITVSRLASGC 186
            +    +T +   SG 
Sbjct: 571 GTCFLQVTATDADSGL 586



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 19/173 (10%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNA 84
            + + TA+   +++ +NL D+NDN PR  +   +    ++      ++++ A D D G+N 
Sbjct: 2103 QAETTASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGMNG 2162

Query: 85   EITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTG-----GKS 135
            ++TY+I   +  TGL  + IDP++G I TT  ++  E +S   + V A D G     G +
Sbjct: 2163 QVTYAINQSLPMTGL--YHIDPQTGTI-TTAAILDREIWSQTRLVVTAMDRGTPPLVGSA 2219

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
            + T+V + +    N  SP      ++V V E   + + +A +T + + SG A+
Sbjct: 2220 TLTVVVMDI----NDNSPTI-PFPWEVRVPENMLLGTQIAQLTGNDVDSGPAL 2267



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 15/168 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
            +   V+ ++      S  +++ V + D+NDNAP           P  +  G     ++++
Sbjct: 1784 YSLTVVVQDHGTPPRSATMTVNVRVLDLNDNAPGFAQASYVVEVPEDLPVGSL---VLQL 1840

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            EA D D G N ++TY   ++ N  L  F+I+P+SG I +  +L    Q  YS   +A D+
Sbjct: 1841 EAEDPDEGTNGQVTY---YLGNESLGMFQIEPQSGRIRSAQELDRERQPSYSFLAKAVDS 1897

Query: 132  G-GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +     V V+V V   N  +P F  +   V++S    +   VAT+
Sbjct: 1898 APWEPKSAAVRVTVTVQDVNDHAPAFLHSPVTVSLSRHTPLKQVVATM 1945



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V+  V + D+NDNAP    + P  +   E R      + + A DNDLG N  ++YS+   
Sbjct: 1492 VTARVFVTDVNDNAPVF--LSPAAVSVTEDRPTGFVALHVVAQDNDLGENGRVSYSLR-- 1547

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG-KSSQTIVEVSVVPGPNT 150
            +  G  +F ++P +G +     L   E  Q+++TV A D G  + S T +   +V   N 
Sbjct: 1548 AGNGDGRFHLNPSTGALSVVRALNREEVVQHNLTVVAADHGFPRRSATQLLSILVLDVND 1607

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F++  Y+ +V E     S V  +
Sbjct: 1608 EAPTFEKPEYEAHVMENLPAGSPVLQV 1634



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 25/165 (15%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVN 83
            G  A VPV++ V   D+NDN P  P    +++ +   R        +  + A D D GV 
Sbjct: 2638 GHFALVPVAIEVK--DVNDNKPYFP----VEVLSASMRENLPPGTLVTTLRAIDTDTGVF 2691

Query: 84   AEITYSIYHVSN------TGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGKS 135
             E+ Y++            G   F I+  SG + +  T      + + + V+ATD G  S
Sbjct: 2692 GELQYAVLEQPAGGPGVAEGRDAFAINSSSGELRSRLTFDYERAKAFQLLVRATDAGNAS 2751

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA----SINSTVAT 176
            +   V V +V G +   P+F   ++   V EGA    SI   +AT
Sbjct: 2752 ATVTVRV-LVTGEDEYDPIFLSPSFSFEVPEGAHKGQSIGRVLAT 2795



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNT 96
            +LTV + DINDN+P +P   P +++  E      +I + T ND+     ++Y++  +   
Sbjct: 2220 TLTVVVMDINDNSPTIPF--PWEVRVPENMLLGTQIAQLTGNDVDSGPALSYTLV-LDGD 2276

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
             +  F +    G I  TG L   +   YS+T++A+DT  ++   +    +V   N  +P 
Sbjct: 2277 AVGTFSVLRYGGRIALTGPLDYEQRSHYSLTLRASDTRHETEANLT--VIVEDMNDNAPA 2334

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            F Q  Y V + E     S + T++ + + SG 
Sbjct: 2335 FSQPFYQVTLPEHTPAGSILLTMSATDMDSGS 2366



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 16/141 (11%)

Query: 41  VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++++D+NDNAP  P      ++P    +A E    +  ++A D D G N ++ + +    
Sbjct: 858 ISVSDVNDNAPTFPSPSDSILLP----EATEPGTTVYTLQAEDRDNGANGQVNFELV--- 910

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTR 151
           + G   F ++  SG +   G L   A   Y +++ A D+G  + S T   +  V   +  
Sbjct: 911 SGGDGTFSVERSSGAVRLVGVLQYEASAAYRLSIVARDSGVPQLSSTFTLLVHVQAEHDN 970

Query: 152 SPVFQQNTYDVNVSEGASINS 172
            P+F   TY V V EG  +++
Sbjct: 971 GPIFDTLTYRVEVREGVPVST 991



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 22/186 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + + + LDRD      + F + A +  G  + V V   V L DINDN P   +  P+   
Sbjct: 615 LCTTQPLDRDE-GTSAYDFTITAVDGGGLNSMVYVK--VFLEDINDNRP---VFYPLDYA 668

Query: 63  AGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           A  + +      ++++ A D D G++ ++TY I   ++  L  F ++  +GVI  +  L 
Sbjct: 669 ASISTQSMPGTAVLRVTAHDKDEGMHGKVTYRIVLGNSPPL--FSLNKDTGVISLSWSLS 726

Query: 118 --AGEQYSITVQATDTGGKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GAS 169
             A     + + A D GG  +Q    V +SVV G     PVF+Q  Y   V E    GAS
Sbjct: 727 GKANTLVQLVISAEDGGGLQAQPNARVNISVVEG-TVSPPVFEQAQYFFTVPEDMLQGAS 785

Query: 170 INSTVA 175
           + +  A
Sbjct: 786 VGAVRA 791



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 19/162 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LTV + D+NDNAP     P  Q+   E   A   ++ + ATD D G N +IT+   H++ 
Sbjct: 2321 LTVIVEDMNDNAPAFSQ-PFYQVTLPEHTPAGSILLTMSATDMDSGSNGDITF---HLAV 2376

Query: 96   TGLHKFRIDPRSGVIETTGKL-IAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
              L    IDP +G + T   +     Q    + V+A D G  S  S   V++ V+   N 
Sbjct: 2377 PSL-DVAIDPSNGTLFTIRPVEFDANQPTLELVVEARDRGSPSLSSWATVQLQVL-DVND 2434

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
             SP+FQ   Y+ +V E     +TV T     L +G A +++E
Sbjct: 2435 HSPIFQVPHYNASVPEDLRPGTTVLT-----LDAGDADLSRE 2471



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVVS   LDR+  N   +   + A +      S  ++L V++ DINDNAP     R   +
Sbjct: 183 LVVSNV-LDRE--NRSSYSLVLEAYDGGTPPRSSQMTLDVSIQDINDNAPAFNQSRYHTL 239

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               ++ G +   I+++ A+D D G N ++ Y I    +     F ID R+GVI    KL
Sbjct: 240 ISENLKPGSS---ILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDSRTGVI----KL 292

Query: 117 IAGEQYSI------TVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVS 165
             G  Y +       VQA D       T   V++ V   N   P    +F        +S
Sbjct: 293 NKGLDYEVRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS 352

Query: 166 EGASINSTVATITVS 180
           EGA     VA I+VS
Sbjct: 353 EGAQPGQYVARISVS 367



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L++ + D+ND AP     P  +    E   A   ++++ ATD DLG N ++TY       
Sbjct: 1598 LSILVLDVNDEAPTFEK-PEYEAHVMENLPAGSPVLQVLATDRDLGANGQVTYG------ 1650

Query: 96   TGLH--KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
             GL    F I P++G+I TT  L     EQ+ + V A D G   + +   V +  G  N 
Sbjct: 1651 -GLSGGPFSIHPQTGLIVTTHPLDREEQEQHVLMVYAQDGGLPPNLSKATVRITVGDEND 1709

Query: 151  RSPVFQQNTYDVNVSEGAS 169
             +P  +  +  V V E  S
Sbjct: 1710 HTPQLESESCSVEVPENQS 1728



 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 26/185 (14%)

Query: 14   PNPGKFR-FQVIAREKQGTAA--------------SVPVSLTVNLNDINDNAPRLPMIP- 57
            P  G+ R  Q + RE+Q + +              S  V +TV + D+ND+AP     P 
Sbjct: 1869 PQSGRIRSAQELDRERQPSYSFLAKAVDSAPWEPKSAAVRVTVTVQDVNDHAPAFLHSPV 1928

Query: 58   PIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             + +      +Q+V  + A D D G NA I Y +     T    F I+  +G I+    L
Sbjct: 1929 TVSLSRHTPLKQVVATMRAEDRDAGANASILYRL----ATPNSAFSINSYTGDIQLLQPL 1984

Query: 117  --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              ++  Q ++ + ATD G    SS  +V + V   P  R   F ++T +V + E A+  +
Sbjct: 1985 SSLSQRQRTLFILATDLGQPALSSTGVVVIHVQEEP-YRGLRFPRSTSEVVLPENAAPGT 2043

Query: 173  TVATI 177
             V +I
Sbjct: 2044 AVTSI 2048



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 17/151 (11%)

Query: 18   KFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIV 71
            +   QV A + Q G  +S  V + + + D ND AP  P  P     P   QAG +   + 
Sbjct: 1362 RHTLQVSAEDTQHGYPSSRLVLVQILVQDCNDQAPTFPEDPITIVVPENAQAGSS---VF 1418

Query: 72   KIEATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
              +A D D +G N+++ Y++      G   F +D RSG++     L   A   + + V+A
Sbjct: 1419 TFQALDGDGVGPNSQVRYALLRQEPPGA-PFHLDSRSGLLSLHQSLDREAVASFLLVVEA 1477

Query: 129  TDTGGKSSQ----TIVEVSVVPGPNTRSPVF 155
            TD     SQ     +     V   N  +PVF
Sbjct: 1478 TDQARNVSQRRSSAVTARVFVTDVNDNAPVF 1508



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 20/180 (11%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDND 79
            V AR++   + S   ++ + + D+ND++P    +P       E  R    ++ ++A D D
Sbjct: 2409 VEARDRGSPSLSSWATVQLQVLDVNDHSPIF-QVPHYNASVPEDLRPGTTVLTLDAGDAD 2467

Query: 80   LG-VNAEITYSIYHVSNTGLHKFRIDPR----SGVIETTGKLIAGEQ--------YSITV 126
            L   NA   Y+I  VS    + F+++ R     G + T G L+  E         Y++TV
Sbjct: 2468 LSRENAGFDYTI--VSGNSGNAFQVESRVAWAGGQLRTQGALVLVEPLDFEAIPVYNLTV 2525

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             A D G     T V V + V   N   PVF +  Y   VSE     + +  +T     SG
Sbjct: 2526 AALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGTELLRLTAHDADSG 2585


>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
          Length = 4863

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 18/183 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAG 64
           LDR+    G +  QV+A +      S  V + V+L D+NDN+   P+  P+Q    IQ  
Sbjct: 691 LDRE--EQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNS---PLFYPVQYFAHIQEN 745

Query: 65  E-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
           E A   +  + A+D DLG+N  + Y+I   S     +F+I  ++GVI +   L   E+  
Sbjct: 746 EPAGSYVATVSASDPDLGINGTVRYTI---SAGDTSRFQIHNQTGVITSKTVLDREEKTA 802

Query: 122 YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           Y + + A D G   S  Q IV V+V+   +   PVF Q+TY   V E  +++  V +++ 
Sbjct: 803 YQLQIGAYDGGNLQSQNQAIVTVNVLDTQD-NPPVFSQDTYSFVVFENVALDYHVGSVSA 861

Query: 180 SRL 182
           S +
Sbjct: 862 STM 864



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASV--PVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            F F VIA + QG    +    ++ V L DINDN P+    +      +      Q++++ 
Sbjct: 1219 FTFTVIAMD-QGLPKPLRDQATVQVYLKDINDNVPKFLKELYQATVSELAANLTQVLRVS 1277

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G N  I YS+  +      +F ID  +G +   GKL   A   YS+T+QA D+G
Sbjct: 1278 ASDVDEGKNGLIHYSV--IKGNEEKQFTIDNSTGQVTLIGKLDHEATASYSLTIQAVDSG 1335

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S  ++  +++ V   N  SP F ++T  V+V E   I   V+++T +   SG
Sbjct: 1336 AVSLSSVCTLNIEVLDENDNSPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1389



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 18/190 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   +      
Sbjct: 1840 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHIPKFSKLWYSFDI 1894

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P     G     +  I ATD D GVN EITY++      G   F ++P +GV   T  L 
Sbjct: 1895 PEDTTPGSL---VAAILATDEDSGVNGEITYTVSEDDGDG--TFFLNPVTGVFNLTCMLD 1949

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q  Y +T++A D GG+S    V ++++   N  +P+F  ++Y  ++ E  S  ST+ 
Sbjct: 1950 YEMQQYYILTIRAEDGGGQSITVRVYINIL-DVNDNAPIFSMDSYSTSLMENLSPGSTIF 2008

Query: 176  TITVSRLASG 185
               V+    G
Sbjct: 2009 LFNVTDADDG 2018



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 14/189 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
            L+ +   +DR+      ++ +V+A    G A +    + + + D+NDN+P  L  +  + 
Sbjct: 891  LITTASVIDRE--EQAFYQLKVVA---SGGAIAGDALVNITVKDLNDNSPHFLHAVESVD 945

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IA 118
            + +       I + +A D D G+N  + YS+          F ++ +SG I  TG L I 
Sbjct: 946  VVENWSTGHTIFQAKAVDPDEGINGIVLYSL---KQNPKDLFSVNEQSGAISLTGPLDIN 1002

Query: 119  GEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               Y + + A+D G   +SS  I+ VSV    N  SPVF Q +Y+V +SE   +NS   +
Sbjct: 1003 AGSYQVEIMASDLGVPRRSSSFILTVSV-HDVNDNSPVFDQLSYEVTISELEPVNSRFFS 1061

Query: 177  ITVSRLASG 185
            +  S   SG
Sbjct: 1062 VHASDKDSG 1070



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIE 74
            K    + A +    A +   S+TVN+ D+NDN+P        P + ++   +   ++ + 
Sbjct: 3203 KHEMSISAIDGGWVARTGYCSITVNVIDVNDNSPVFSPEDYFPSV-LENAPSGTTVIHLS 3261

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            ATD D G NA I Y++   S++ L  F IDP +G+I T G L     + Y +T++A +  
Sbjct: 3262 ATDADSGSNAVIAYAV-QSSDSDL--FVIDPNTGIITTQGFLDYETKQSYHLTIKAFNVP 3318

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +   +   V++ + G N   P F    Y   VSE A+  + V  +  S   +G
Sbjct: 3319 DEERCSFANVNIHLKGTNEYVPRFVSKLYYFEVSEAAAKGTIVGEVFASDRDTG 3372



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 31/207 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
           +VS+  LDR+     +   QV  + +      + V++TV   DINDN P         R+
Sbjct: 192 LVSRGGLDREATPAYQLLLQVEDKGEPRKRGYLQVNVTVQ--DINDNPPVFSQTLYQARV 249

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSG 108
           P   P+          ++++ A D D G NA+I Y +    + G+       F +DP SG
Sbjct: 250 PEDAPVG-------ASVLQVTAADADEGTNADIRYRLEGAESAGVDGAGALPFEVDPESG 302

Query: 109 VIETTGKLIAG--EQYSITVQATDTG-----GKSSQTIVEVSVVPG-PNTRSPVFQQNTY 160
           VI     L      QYS+TVQA D G     G++   I  + V    P  +   F   + 
Sbjct: 303 VIRIREALDYELRRQYSLTVQAIDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSR 362

Query: 161 DVNVSEGASINSTVATITVSRLASGCA 187
             +V E A+  + VA +TVS   S  A
Sbjct: 363 FASVDENAAPGTVVALLTVSDADSPAA 389



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L D+NDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1772 ITLQDVNDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGADGS 1830

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             H   IDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N   P F
Sbjct: 1831 FH---IDPESGELIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHIPKF 1885

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1886 SKLWYSFDIPEDTTPGSLVAAILATDEDSG 1915



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      +   +IA +K   + S   ++ V + DINDN P        +I+  E   
Sbjct: 2156 LDRE--TVSNYTLTIIATDKGQPSLSSSTNVVVVVLDINDNNPVFAQ-KLYKIEIAENIL 2212

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
                +V++ +TD D G N ++ Y+I  +S    ++FRID  +GVI T GK +  E+   Y
Sbjct: 2213 TGTDVVQVSSTDGDEGSNGQVRYAI--ISGNINNEFRIDSVTGVI-TVGKSLDREKKPSY 2269

Query: 123  SITVQATDTGGKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSE 166
            S+TVQ+ D G         VS++    N   P F+ + Y VNV E
Sbjct: 2270 SLTVQSADRGSSPRIDTTTVSIILIDVNDYIPTFELSPYSVNVPE 2314



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----PMIPPIQIQAGEARRQI 70
            N  +  F V + ++         ++T+N+ D NDNAP         P  +  A     ++
Sbjct: 2989 NLNRHSFIVTSSDRGSPPLMSETTVTINIVDSNDNAPHFLASQYFTPATKNVA--VGTKL 3046

Query: 71   VKIEATD-NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            +K+ A D  D G+N+E+ Y +  ++N  + KF +D  +G I     LI    + + I V+
Sbjct: 3047 IKVTAVDTKDFGLNSEVEYLL--LNNDLMSKFNLDHNTGWISVGSSLINDMNKNFLIKVK 3104

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G    SS+  V++ VV   N  +P F Q+   + V E  ++ + + T++
Sbjct: 3105 AKDKGNPPLSSEVTVQI-VVTEENYHTPEFSQSHESITVLESHAVGAILRTVS 3156



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 13/176 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+  N  ++   + A ++     S  V + +N+ D NDNAP+   I    + +     
Sbjct: 2775 LDRE--NVAQYMLTIKASDRGTPVQSASVQVLINVLDENDNAPKFSQIFSALVPENAPLG 2832

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
              + ++  +D D+GVNA   YS+   +NT    F I+P +G I T  +L+  E   +Y I
Sbjct: 2833 YTVTRVTTSDEDIGVNAVSRYSLKE-TNT---PFVINPNTGDI-TISRLLNREDADRYRI 2887

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V A D+G   S  +     V   N  SP F + +Y ++  E   I S V  I+ +
Sbjct: 2888 RVSAHDSGWTVSTDV--TIFVTDINDNSPRFTKPSYYLDCPELNEIGSKVTQISAT 2941



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 16/151 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIP---- 57
            +++   LDR+      +   ++AR+     A S   S+ V + D+NDN P+    P    
Sbjct: 2461 IITSALLDRETKE--NYTLIIVARDGGFPNALSSSTSVLVTIADVNDNPPKFQHHPYVTH 2518

Query: 58   -PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P    +G     +  +  TD D G NAE+ YS+    N+G  KF IDP  G I    +L
Sbjct: 2519 IPSPTSSGTF---VFAVTVTDADAGPNAELHYSLSG-KNSG--KFHIDPSRGAIMAAERL 2572

Query: 117  IAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
                + + TV   D G   K+  T V V  V
Sbjct: 2573 TGTSEMTFTVNVKDGGMHPKTDSTTVTVRFV 2603



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)

Query: 39   LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT 96
            + ++L   N+  PR    +   ++    A+  IV ++ A+D D G + E+ Y I+   N+
Sbjct: 3328 VNIHLKGTNEYVPRFVSKLYYFEVSEAAAKGTIVGEVFASDRDTGTDGEVHYLIF--GNS 3385

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
                F+ID  SG I  TG L     E+ S+ V A + G      I EV+V   V   N  
Sbjct: 3386 RKKGFQIDVSSGQIYVTGPLDREKEERISLKVLAKNAGSIRGADIDEVAVNITVLDAND- 3444

Query: 152  SPVFQQNTYDVNVSEGASINSTVATIT 178
             PVF    Y+V +SEG  + + V  ++
Sbjct: 3445 PPVFNLEVYNVQISEGVPVGTHVTFVS 3471



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 6/175 (3%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
            N G ++ +++A +      S    LTV+++D+NDN+P    +   + I   E    +   
Sbjct: 1002 NAGSYQVEIMASDLGVPRRSSSFILTVSVHDVNDNSPVFDQLSYEVTISELEPVNSRFFS 1061

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDT 131
            + A+D D G N EI Y+I    NTG   F I P   + I++       E+Y++ V A+D 
Sbjct: 1062 VHASDKDSGENGEIAYNIIE-GNTG-DAFGIFPDGQLYIKSELDRELQERYTLVVAASDR 1119

Query: 132  GGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +     V VSV+    N   P+F    Y     E     S V  I+     SG
Sbjct: 1120 AVEPLSATVNVSVILEDVNDNRPLFNSTNYAFYYEEEQVGGSFVGKISAFDKDSG 1174



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 22/149 (14%)

Query: 33   ASVPVS-------LTVNLNDINDN-----APRLPMIPPIQIQAGEARRQIVKIEATDNDL 80
            AS+P S       +++ L D+NDN     +P+L  IP    +       + K +ATD D 
Sbjct: 2068 ASLPTSRFTSTTQVSIILLDVNDNPPSFISPKLTYIP----ENTPVDTIVFKAQATDPDS 2123

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS-SQ 137
            G N+ I YS+ + S     KF I    G +  TG+L       Y++T+ ATD G  S S 
Sbjct: 2124 GPNSYIEYSLLNPSG---KKFSIGTIDGEVRLTGELDRETVSNYTLTIIATDKGQPSLSS 2180

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +   V VV   N  +PVF Q  Y + ++E
Sbjct: 2181 STNVVVVVLDINDNNPVFAQKLYKIEIAE 2209



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + DINDN P     P I ++       +I+ + A 
Sbjct: 2678 KYVVWIEARDMGFPPFSSYAKLEITVIDINDNMPVFEQDPFIVEVVENIPPSKIITVTAA 2737

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  +S    + F I   +G I +   L      QY +T++A+D G  
Sbjct: 2738 DKDSGPNGQLNYEI--ISGNVDNSFSIHRANGEIRSVRPLDRENVAQYMLTIKASDRGTP 2795

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                 V+V + V   N  +P F Q  +   V E A +  TV  +T S
Sbjct: 2796 VQSASVQVLINVLDENDNAPKFSQ-IFSALVPENAPLGYTVTRVTTS 2841



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAPR------LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D NDN P       L   P + I        +  I A D D G N E+ Y I  
Sbjct: 1559 VTILVTDQNDNVPAFVSQNALAADPSVMIGT-----VLTTIVAADPDEGANGEVEYEII- 1612

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +  +  L+  +  Y+  + ATD G +  ++  E++V+      
Sbjct: 1613 --NGDRDIFLVDRYSGELRVSSPLVPSQLMYTFIISATDLGAERRKSTTEMTVLL-QGLE 1669

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             PVF Q  Y   + EG  I + V +I
Sbjct: 1670 GPVFTQPKYITILKEGEPIGTNVISI 1695



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 26   REKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVN 83
            R + G   S+ V + +N+ D+NDNAP   M       ++       I     TD D G N
Sbjct: 1961 RAEDGGGQSITVRVYINILDVNDNAPIFSMDSYSTSLMENLSPGSTIFLFNVTDADDGSN 2020

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++++YSI   S   L +F ID ++G++     L    Q  YS+ VQ  D
Sbjct: 2021 SQLSYSI--TSGDSLSQFNID-KNGILSIRQPLDRESQSFYSLIVQVHD 2066



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V ++D+NDN P+      ++    +A     ++ + ++D D  VNA I+ S      
Sbjct: 2393 TIAVKVDDVNDNIPKFAFNMYLKTIPEDAPTGTDVLLVNSSDADASVNAIISLS------ 2446

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNT 150
             G  +F I+P +G I T+  L     E Y++ + A D G     SS T V V++    N 
Sbjct: 2447 GGNSQFTINPSTGQIITSALLDRETKENYTLIIVARDGGFPNALSSSTSVLVTIA-DVND 2505

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              P FQ + Y  ++    S  + V  +TV+   +G
Sbjct: 2506 NPPKFQHHPYVTHIPSPTSSGTFVFAVTVTDADAG 2540



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +   + A +    + S   +L + + D NDN+P  P    + +   E  R    +  + A
Sbjct: 1325 YSLTIQAVDSGAVSLSSVCTLNIEVLDENDNSPSFPK-STLFVDVLENMRIGELVSSVTA 1383

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD+D G NA++ YSI   +N G   F I P +G I     L    Q  Y + + A D G 
Sbjct: 1384 TDSDSGDNADLHYSITGTNNHG--TFSISPNTGSIFLAKALDFETQSMYKLNITAKDKGR 1441

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               S T+  V  V   N   P F       ++ E   + S+V ++T
Sbjct: 1442 PPQSSTMSVVIYVRDYNDNPPKFPPGDIFKSIVENIPVGSSVISVT 1487



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 29/173 (16%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           + P  + + + D+NDNAP  P  P I +   E   + RQ++   ATD D G N  + +S 
Sbjct: 106 TYPSEVRIVVLDLNDNAPIFPD-PSIVVTFKEDTGSGRQLILDTATDADSGTNG-VDHSS 163

Query: 91  YHV--SNTGLHKFRID---------------PRSGVIETTGKLIAGEQYSITVQATDTGG 133
           Y +   N G  +FR++                R G+        A   Y + +Q  D G 
Sbjct: 164 YRIVGGNEG-GRFRLNITLNPSGEGAFLHLVSRGGLDRE-----ATPAYQLLLQVEDKGE 217

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +  ++V+V V   N   PVF Q  Y   V E A + ++V  +T +    G
Sbjct: 218 PRKRGYLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVLQVTAADADEG 270



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPI--QIQAGEARRQIVKI 73
            ++  + A++K     S  +S+ + + D NDN P+ P   +   I   I  G +   ++ +
Sbjct: 1430 YKLNITAKDKGRPPQSSTMSVVIYVRDYNDNPPKFPPGDIFKSIVENIPVGSS---VISV 1486

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A D D  +N ++ Y+I      G H F+ID   G I T+ ++       + +TV+A D
Sbjct: 1487 TAHDPDADINGQLVYTIIQQMPRGNH-FQIDEVKGTIYTSAEIDREFANLFELTVKAID 1544



 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----PMIPPIQI 61
            K  LDR+     ++   V A ++     S  V+++V L D+NDN P            + 
Sbjct: 1099 KSELDRELQE--RYTLVVAASDRAVEPLSATVNVSVILEDVNDNRPLFNSTNYAFYYEEE 1156

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---- 117
            Q G +   + KI A D D G N E+ YS  H+       F ++  SG I++T +L     
Sbjct: 1157 QVGGSF--VGKISAFDKDSGSNGEVRYSFEHMQ----PDFELNAISGEIKSTHQLDRESL 1210

Query: 118  ----AGEQYSITVQATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
                    ++ TV A D G       Q  V+V  +   N   P F +  Y   VSE A+ 
Sbjct: 1211 MRQRGTAVFTFTVIAMDQGLPKPLRDQATVQV-YLKDINDNVPKFLKELYQATVSELAAN 1269

Query: 171  NSTVATITVSRLASG 185
             + V  ++ S +  G
Sbjct: 1270 LTQVLRVSASDVDEG 1284



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 52/127 (40%), Gaps = 30/127 (23%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS------LTVNLNDINDNAPRLPM- 55
           V   +N     P+PG     V +      A S PVS      L + +NDIND+ P     
Sbjct: 437 VAVTDNFGAPAPSPGP----VFSSLSPDGAVSAPVSRSSVASLVIFVNDINDHPPVFGQS 492

Query: 56  ---------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR 106
                    +PP     G        + ATD D G+NA + Y+I  VS   L  F I   
Sbjct: 493 VYQVNISEEVPPGSYVEG--------LSATDRDSGLNANLKYNI--VSGNDLGWFCISEH 542

Query: 107 SGVIETT 113
           SG++ TT
Sbjct: 543 SGLVTTT 549



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 13/151 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++++ L D+ND  P   + P     P  ++  +  + I+++ A D+D G+N+++TY +  
Sbjct: 2288 TVSIILIDVNDYIPTFELSPYSVNVPENLE--KLPKLILQVVARDDDQGLNSKLTYLLVG 2345

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             +  G   F + P SG I     L     EQY + + ATD+G  +      ++V V   N
Sbjct: 2346 GNEDG--AFTLSP-SGDIHLVKSLDREKKEQYVMLITATDSGSPTLTGTGTIAVKVDDVN 2402

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P F  N Y   + E A   + V  +  S
Sbjct: 2403 DNIPKFAFNMYLKTIPEDAPTGTDVLLVNSS 2433


>gi|74228304|dbj|BAE24011.1| unnamed protein product [Mus musculus]
          Length = 908

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 226 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 379



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   + AG A  ++V       
Sbjct: 530 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSELVSRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 636



 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 404 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 460

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 461 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 493


>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
            suppressor homolog [Apis florea]
          Length = 4753

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT   + + SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 3268 QGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTE----VARVLATSKDTG 3323

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            VNA++ YSI  V      KF+ID R+GVI    +L       Y +T+QA D G    S+ 
Sbjct: 3324 VNADVYYSI--VGGNEHKKFQIDARTGVIIIAEQLDFERARDYFLTIQAVDGGIPPLSNH 3381

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V+   N  +P+F + +Y  ++ E A I   V  +  + L S
Sbjct: 3382 ATVNITVIDS-NDNAPIFSEVSYRASIREDAKIGEKVIQVFANDLDS 3427



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 10/182 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            +  S   LDR+  N  +   +V  R+    + S    + + + DIND+ P        +Q
Sbjct: 1272 ITTSGRKLDRE--NQAEHVLEVTVRDDGWPSLSSTTRVVIAVADINDHGPEFEQKFYTVQ 1329

Query: 61   IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I A     + + ++ A D D+G N +I YSI      G  KF+I P +G++ +     AG
Sbjct: 1330 IPASPSTDKPLFQVLAKDKDIGDNGKIQYSI--KGGRGKGKFKIHPTTGMVYSQRGFEAG 1387

Query: 120  EQYSITVQATDTG--GKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            ++Y + ++A D G   +S QT V V V  VP  +   PVF+ N   V V+E   +   VA
Sbjct: 1388 QEYEMMIRAADCGEPQRSHQTRVSVQVVEVPKESENPPVFKTNNQSVEVTESDKVGFLVA 1447

Query: 176  TI 177
             +
Sbjct: 1448 LV 1449



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 16/139 (11%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L + + D+NDNAPR    +   +I +       + +  A+D DLG NA +TYS+   +N 
Sbjct: 881  LPITILDVNDNAPRFDKSLASFRISETALNGTNVWRANASDADLGENARVTYSLVTETN- 939

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
                FR+DP +GV+   G+L    Q  Y + ++A D GGK        S  +V V +V  
Sbjct: 940  ---DFRVDPVTGVLTVFGRLDRERQDVYELRIRAQDNGGKGADAPPLYSDALVRV-MVDD 995

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P F  ++Y V + E
Sbjct: 996  VNDNAPTFALSSYTVKIRE 1014



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+     K+      +++   +      L + ++D+NDNAP+  M       P  ++ 
Sbjct: 3147 LDRE--TQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNAPKFTMQTYSATLPEDVEV 3204

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATD+D+G+N +I Y     ++     F I   SG++ T GK +  E   
Sbjct: 3205 GTL---VTKVHATDDDIGINRKIRYEFIDSADG---HFLIATDSGIV-TLGKPLDRETKA 3257

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G     ++  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 3258 MYNVTIQALDQGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTEVARVLA 3317

Query: 180  SRLASG 185
            +   +G
Sbjct: 3318 TSKDTG 3323



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++++ + DND  +N ++
Sbjct: 2336 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISVSEAAPFGTSVLRVSSRDNDTDINQQV 2392

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             Y+I + +      F IDP  GVI     L   A E +  TV A D G  S  +   V V
Sbjct: 2393 RYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWV 2452

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 2453 TVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 2489



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 9/136 (6%)

Query: 47   NDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            N + P+ P  P +++   E +   R +  + ATD+D G    + YSI   S      F I
Sbjct: 2559 NRHNPKFPN-PVVEVTVFENQLPGRLVTSVIATDDDFGEYGTVVYSI--PSELMKEIFDI 2615

Query: 104  DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            +  +G I T  KL   EQ  Y I V ATD GG+S   +V V  V   N  SPVF    Y 
Sbjct: 2616 NRLTGEIVTRKKLNREEQKLYEIPVMATDGGGRSGFVMVRVK-VGDENDNSPVFLLREYK 2674

Query: 162  VNVSEGASINSTVATI 177
             ++    +IN++   +
Sbjct: 2675 ASIHGNLTINTSFLKV 2690



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 16/162 (9%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATD 77
            R Q+  REK   A    V + V + DINDN P    +P   + + EA++   I K+ A D
Sbjct: 2124 RSQMAGREKPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVEAQKGDIITKVHAID 2180

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSS 136
             D G N E+ Y +          F++  ++G I     L     +Y +T+ A D GG + 
Sbjct: 2181 MDSGDNGEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITP 2236

Query: 137  QTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +I   V V V+   +   PVF +  Y  +V E   I+S +A
Sbjct: 2237 CSIEVPVNVKVI---DRSMPVFDKQFYTDSVLESIEIHSPLA 2275



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 10/158 (6%)

Query: 27   EKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
            + QGT A    + + V ++D ND+AP   +   IQ +  E       +V++ A D D G 
Sbjct: 1605 KDQGTPAKRNYARVIVTVHDHNDHAPEF-ISEIIQGKVYETSPIGAAVVQVYAIDRDKGD 1663

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIV 140
            NA+ITYSI    N G + F IDP  GVI    +  L A  +Y + V+ATD G  +    V
Sbjct: 1664 NAKITYSITS-GNVG-NMFTIDPNLGVIRVARELDLSASSEYILLVKATDHGSPALANTV 1721

Query: 141  EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V V V   +   P F Q      + E   + + V  +
Sbjct: 1722 PVHVMVTMADNAPPRFIQKELSAEIYENQQLGTYVKHV 1759



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  N       V+A        +    +++ + D ND+AP+     P  I   E   
Sbjct: 2835 LDRE--NKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFES-NPYGISVAENVE 2891

Query: 69   Q---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
            +   I+KI A D+DLG N E+ YS         + F +D  +G I T  +L   +Q  Y 
Sbjct: 2892 EGTSILKIIAHDDDLGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYK 2951

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
              V ATD G         V V +   N   P F  + Y+  V+E A
Sbjct: 2952 FQVVATDNGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEATVNEDA 2997



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 12/164 (7%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEATDNDLGVNAEIT 87
           GT       + +N+ D NDN P        + I   E A   +VKI A D D G NA I+
Sbjct: 503 GTRKQSSAKVKINVVDTNDNDPTFEQSEMEVWIDENEPAGTSVVKITAKDRDSGENAYIS 562

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG---GKSSQTIVE 141
           YSI ++       F ID  SG++ T   L       +Y + V+ +D G    + ++  + 
Sbjct: 563 YSIDNIQKV---PFEIDHFSGIVRTKQVLDYETMKREYLLHVRVSDWGMPFRRQAEMRLH 619

Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V V    + R P F++     +V    SI S + T++     +G
Sbjct: 620 VKVRDVNDNR-PQFERIDCTGHVPRYVSIGSEIITVSAIDFDAG 662



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        +I  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 3071 VTVQILDVNDNPPYCLRYRYREILSEGSHPGTYVLTVLATDYDDEPNAKLRFYLTGDNND 3130

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               KF +D  +GV++T G+L    Q  YS+T    D    S +   ++ + +   N  +P
Sbjct: 3131 ---KFSLDKETGVLKTIGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNAP 3187

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F   TY   + E   + + V  +
Sbjct: 3188 KFTMQTYSATLPEDVEVGTLVTKV 3211



 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L   +  QY +TV+ATD+  G  ++ 
Sbjct: 2284 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 2341

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +V + V+   N   P F Q++Y+++VSE A   ++V  ++
Sbjct: 2342 LVSILVL-DVNDCPPEFTQDSYNISVSEAAPFGTSVLRVS 2380



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 39  LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+ +  +N ++P + +  +P I   +      IV++   DND G + +I  S+  V   
Sbjct: 294 VTIKVRQVNLHSPEIYVHHLPDIVEHSNADIYAIVRV--IDNDEGTHGQIA-SLDIVGGD 350

Query: 97  GLHKFRIDPRSG---------VIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV 145
               FR+ P  G         V+    +  A + Y++T++A D G   + S   V V + 
Sbjct: 351 PAGHFRVRPAGGPHSGEYNIEVLHLLDRETATQGYNLTLRAMDRGIPQRFSYKFVPVHLA 410

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N  +PVF +  Y+V V E A IN+ V  + V+    G
Sbjct: 411 -DLNDNAPVFSREIYEVKVPETAPINTPVIQLKVTDADEG 449



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 17/100 (17%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ ND+N      P+  P + +A         R I+++ A D DLG N EI YS+   ++
Sbjct: 192 LDTNDLN------PLFYPTEYEATITEDTPMHRSILRVIAEDADLGRNGEIYYSLAEETD 245

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
               +F + P SGVI  T  L   E+  + + V A D G 
Sbjct: 246 ----QFAVHPVSGVITLTRPLRYSERAIHELVVLAKDRGA 281



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGEAR 67
            KF F V   +  K   ++     + + + D+ND  P+          ++P  +  A    
Sbjct: 1912 KFTFHVKVSDLGKPKLSSETTAKVMILVTDVNDCPPKFLENDYNTTVLLPTYKNVA---- 1967

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ 127
              ++++ A D D      + Y I  +     H F ID ++GVI         + Y + V+
Sbjct: 1968 --VIRVTAVDPDSSEGIPLRYDI--IDGNKAHTFDIDSQTGVITVYNPERMKKSYMLRVR 2023

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             +D G  SS   V V V    N+   +FQ++ Y+  + E ++  +TVA + V
Sbjct: 2024 VSD-GKYSSVCQVNVMVEKSENS-GLMFQKDVYEGTIPENSTRITTVAVVNV 2073



 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F ++P +G+I    +L   +   Y++T+ AT+     +   V V V+   N  +P F Q 
Sbjct: 1780 FFVNPSTGIIVIKNELDYEKTKFYNLTIAATNMASAKAHCNVIVHVL-DRNDNAPRFLQA 1838

Query: 159  TYDVNVSEGASINSTVATITVSRL 182
             Y   +SEGA+I S V T T + L
Sbjct: 1839 AYSGEISEGATIGSLVLTNTSTPL 1862


>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
           gallopavo]
          Length = 3001

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 17/196 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----- 55
           YL+   + LDR+  +   +  +V A +          +  + + DINDN P         
Sbjct: 398 YLICVDQLLDREERD--SYDLRVTATDSGTPPLRAESTFVLQVIDINDNPPLFDQQEYKQ 455

Query: 56  -IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            IP + +  G     ++++ A D D G N E+ YSI H  +T    F IDP +G+I T  
Sbjct: 456 SIPEV-VYPGSF---VLQVTARDKDQGPNGEVQYSIKHSQDTHSSWFAIDPATGIITTAA 511

Query: 115 KLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            L   +  Q  +TV ATD G    SS  +V V+ +   N   PVF+ N Y+V++ E   +
Sbjct: 512 PLDYEKDPQPQLTVLATDRGTPALSSSAVVLVA-LQDVNDNEPVFRSNFYNVSLKENTPV 570

Query: 171 NSTVATITVSRLASGC 186
            +    +T +   SG 
Sbjct: 571 GTCFLQVTATDADSGL 586



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 19/173 (10%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNA 84
            + + TA+   +++ +NL D+NDN PR  +   +    ++      ++++ A D D G+N 
Sbjct: 1846 QAETTASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGMNG 1905

Query: 85   EITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTG-----GKS 135
            ++TY+I   +  TGL  + IDP++G I TT  ++  E +S   + V A D G     G +
Sbjct: 1906 QVTYAINQSLPMTGL--YHIDPQTGTI-TTAAILDREIWSQTRLVVTAMDRGTPPLVGSA 1962

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
            + T+V + +    N  SP      ++V V E   + S +A +T + + SG A+
Sbjct: 1963 TLTVVVMDI----NDNSPTI-PFPWEVRVPENMLLGSQIAQLTGNDVDSGPAL 2010



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 25/165 (15%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVN 83
            G  A VPV++ V   D+NDN P  P    +++ +   R        +  + A D D GV 
Sbjct: 2381 GHFALVPVAIEVK--DVNDNKPYFP----VEVLSASMRENLPPGTLVTTLRAIDTDTGVF 2434

Query: 84   AEITYSIYHV------SNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGKS 135
             E+ Y++         +  G   F I+  SG + +  T      + + + V+ATD G  S
Sbjct: 2435 GELQYAVLEQPVGGPGAAEGRDAFAINSSSGELRSRLTFDYERAKAFQLLVRATDAGNAS 2494

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA----SINSTVAT 176
            +   V V +V G +   P+F   ++   V EGA    SI   +AT
Sbjct: 2495 ATVTVRV-LVTGEDEYDPIFLSPSFSFEVPEGAHKGQSIGRVLAT 2538



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 16/141 (11%)

Query: 41  VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++++D+NDNAP  P      ++P    +A E    +  ++A D D G N ++ + +    
Sbjct: 858 ISVSDVNDNAPAFPSPSDSILLP----EATEPGTAVYTLQAEDRDSGANGQVNFELV--- 910

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTR 151
             G   F ++  SG +   G L   A   Y + + A D+G  + S T   +  V   +  
Sbjct: 911 XGGEGTFSVERSSGAVRLAGVLQYEASAAYRLAIVARDSGVPQLSSTFTLLVHVQAEHDN 970

Query: 152 SPVFQQNTYDVNVSEGASINS 172
            P+F   TY V V EG  +++
Sbjct: 971 GPIFDTLTYRVEVREGVPVST 991



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 22/186 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + + + LDRD      + F + A +  G  + V V   V L DINDN P   +  P++  
Sbjct: 615 LCTAQPLDRDE-GTSAYDFTITAVDGGGLNSMVYVK--VFLEDINDNRP---VFYPLEYA 668

Query: 63  AGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           A  + +      ++++ A D D G++ ++TY I   ++  L  F ++  +GVI  +  L 
Sbjct: 669 ASISTQSMPGTAVLRVTAHDKDEGMHGKVTYRIVLGNSPPL--FSLNKDTGVISLSWSLS 726

Query: 118 --AGEQYSITVQATDTGGKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GAS 169
             A     + + A D GG  +Q    V +S+V G     PVF+Q  Y   V E    GAS
Sbjct: 727 GKANTLVQLVISAEDGGGLQAQPNARVNISIVEG-TVSPPVFEQAQYFFTVPEDTLQGAS 785

Query: 170 INSTVA 175
           + +  A
Sbjct: 786 VGAVRA 791



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 15/168 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
            +   V+ ++      S  +S+ V + D+NDNAP           P  +  G     ++++
Sbjct: 1514 YSLTVVVQDHGTPPRSATMSVNVQVLDLNDNAPGFAQASYVVEVPEDLPVGSL---VLQL 1570

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            EA D D G N ++TY   ++ N  L  F+++P+SG I +  +L    Q  YS   +A D+
Sbjct: 1571 EAKDPDEGTNGQVTY---YLGNESLGMFQVEPQSGRIRSAQELDRERQPSYSFLAKAVDS 1627

Query: 132  GGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                  S  +     V   N  +P F  +   V++S        VAT+
Sbjct: 1628 APWEPKSAAVRVTVTVRDVNDHAPAFLHSPLTVSLSRHTPPKQVVATM 1675



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 12/154 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVS 94
            +LTV + DINDN+P +P   P +++  E      QI ++  T ND+     ++Y++  + 
Sbjct: 1963 TLTVVVMDINDNSPTIPF--PWEVRVPENMLLGSQIAQL--TGNDVDSGPALSYTLM-LD 2017

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
               +  F +    G I  TG L   +   YS+T++A+D+  ++   +    +V   N  +
Sbjct: 2018 GDAVGTFSVLRYGGRIALTGPLDYEQRSHYSLTLRASDSRHETEANLT--VIVEDVNDNA 2075

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            P F Q  Y V + E     S + T++ + + SG 
Sbjct: 2076 PAFSQAFYQVTLPEHTPAGSILLTMSATDMDSGS 2109



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 39   LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            LTV + D+NDNAP        +  P    AG     ++ + ATD D G N EIT+   H+
Sbjct: 2064 LTVIVEDVNDNAPAFSQAFYQVTLPEHTPAGSI---LLTMSATDMDSGSNGEITF---HL 2117

Query: 94   SNTGLHKFRIDPRSGVIETTGKL-IAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGP 148
            +   L    IDP +G + T   +     Q    + V+A D G  S  S   V++ V+   
Sbjct: 2118 AVPSL-DVAIDPSNGTLFTIRPVEFDANQPTLELVVEARDHGSPSLSSWATVQLQVL-DV 2175

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
            N  SP+FQ   Y+ +V E     +TV T     L +G A +++E
Sbjct: 2176 NDHSPIFQVPHYNASVPEDLRPGTTVLT-----LDAGDADLSRE 2214



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVVS   LDR+  N   +   + A +      S  ++L V++ DINDNAP     R   +
Sbjct: 183 LVVSNV-LDRE--NRSSYSLVLEAYDGGSPPRSSQMTLDVSVQDINDNAPTFNQSRYHTL 239

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               ++ G +   I+++ A+D D G N ++ Y I    +     F ID R+GVI    KL
Sbjct: 240 ISENLKPGSS---ILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDSRTGVI----KL 292

Query: 117 IAGEQYSI------TVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVS 165
             G  Y +       VQA D       T   V++ V   N   P    +F        +S
Sbjct: 293 NKGLDYEVRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS 352

Query: 166 EGASINSTVATITVS 180
           EGA     VA I+VS
Sbjct: 353 EGAQPGQYVARISVS 367



 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L++ + D+ND AP     P  +    E   A   ++++ ATD DLG N ++TY       
Sbjct: 1328 LSILVLDVNDEAPTFEK-PEYEAHITENLPAGSPVLQVLATDRDLGANGQVTYG------ 1380

Query: 96   TGLH--KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
             GL    F I P++G+I TT  L     EQ+ + V A D G   + +   V +  G  N 
Sbjct: 1381 -GLSGGPFSIHPQTGLIVTTHPLDREEQEQHVLMVYARDGGLPPNLSKATVRITVGDEND 1439

Query: 151  RSPVFQQNTYDVNVSEGAS 169
             +P  +  +  V V E  S
Sbjct: 1440 HTPQLESESCSVEVPENQS 1458



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 20/180 (11%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDND 79
            V AR+    + S   ++ + + D+ND++P    +P       E  R    ++ ++A D D
Sbjct: 2152 VEARDHGSPSLSSWATVQLQVLDVNDHSPIF-QVPHYNASVPEDLRPGTTVLTLDAGDAD 2210

Query: 80   LG-VNAEITYSIYHVSNTGLHKFRIDPR----SGVIETTGKLIAGEQ--------YSITV 126
            L   NA   Y+I  VS  G + F+++ R     G + T G L+  E         Y++TV
Sbjct: 2211 LSRENAGFDYTI--VSGNGGNAFQVESRVAWAGGQLRTQGALVLVEPLDFEAIPVYNLTV 2268

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             A D G     T V V + V   N   PVF +  Y   VSE     + +  +T     SG
Sbjct: 2269 AALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGTELLRVTAHDADSG 2328


>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
            tropicalis]
          Length = 4570

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 19/177 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+  +  +   +V   +K  T A V V +TV   D+NDN P    LP    +QI A E
Sbjct: 2008 FDREEEDLFELVVEVSDEQKPPTVAHVLVQVTVE--DVNDNNPVFVNLPYYAMVQIDAPE 2065

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
                I  + A D D+G N EITY +   S     +F+I P SG I+   +     + ++Y
Sbjct: 2066 GHL-IRHVTAVDRDIGKNGEITYYLKEHS----QQFQIGP-SGEIKLKKQFDPDSSNKEY 2119

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ITV A D+G    SS+ +V ++V+   N   PVF+   Y   ++E A+++S V  +
Sbjct: 2120 FITVVAKDSGNPSYSSEVVVPITVM---NKAMPVFENPFYSAEIAENANLHSPVVHV 2173



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 15/166 (9%)

Query: 32   AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            A S    + V + D NDN P         RLP     + +    R  I ++ A D D G 
Sbjct: 1193 AKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPEREKPERERNAKRDPIYRVVAVDKDDGA 1252

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIV 140
            NAEI+YSI      G  KF I+P++GV+ +     AGE   ++++A D G   KSS T +
Sbjct: 1253 NAEISYSIEEGDEHG--KFFIEPKTGVVSSKKSSAAGEYDILSIKAVDNGRPQKSSTTRL 1310

Query: 141  EVSVV--PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             +  +  P P+     F++ ++  +V E   +   +  IT   L S
Sbjct: 1311 HIEWIAKPAPSAEPITFEEPSFSFSVMESDPVAHMIGVITTEPLGS 1356



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E  DR+ P        V+A++  G      V+  V L D NDN P+          
Sbjct: 2517 LFTAERFDREIPTNKVIPVSVMAKDTGGKVGFCIVN--VILTDSNDNVPQFRATEYKVSI 2574

Query: 63   AGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A +  R   IVK+ A+D+D G NA+I YSI   S +    F I   SG I T   LI  E
Sbjct: 2575 ASDVPRGTPIVKVIASDSDEGANADIFYSIEAQSASVEENFGISQSSGTIITKESLIGLE 2634

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               YS  V+ATD G    +++V V + +  P    P F +  Y +++SE  ++ + +  +
Sbjct: 2635 DEVYSFFVKATDGGTPQKESLVPVFIRILPPEVVLPKFSEPFYTLSISEDTAVGTELDVV 2694



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 9/141 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEIT 87
            GT A+  V + V + D NDN P        +  + +A   R I+++ A+D D+  NAEI 
Sbjct: 2970 GTFATKAV-VEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADIRSNAEII 3028

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVV 145
            Y+++ V   G  KF ++P +G ++T+  L     E Y + V+ATD GG+  Q  VE++ +
Sbjct: 3029 YTLHGV---GAEKFHLNPFTGELKTSLPLDREILEVYHLMVKATDGGGRFCQAAVELT-L 3084

Query: 146  PGPNTRSPVFQQNTYDVNVSE 166
               N  +P F  + Y V V E
Sbjct: 3085 EDVNDNAPEFSADPYTVTVYE 3105



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 7/145 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + +N+ D ND+AP            ++      ++++ A D D G NAE+ YSI   S  
Sbjct: 1517 IVINVTDTNDHAPWFTSSFYEGRVYESAAVGSAVLQVSALDKDKGKNAEVGYSIE--SGN 1574

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              + F IDP  G+I+T  +L       Y + V+ATD G      I  + + V   N  +P
Sbjct: 1575 TANAFTIDPVLGIIKTAKELDRNNHGRYELVVKATDHGIPPLSQITSIHIFVTISNNAAP 1634

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F +  Y   +SE A + S VA ++
Sbjct: 1635 KFTKKEYSSEISETAHVGSFVAMLS 1659



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEAT 76
            +   V A +  G      V LT  L D+NDNAP     P      +  E +  +++++A 
Sbjct: 3062 YHLMVKATDGGGRFCQAAVELT--LEDVNDNAPEFSADPYTVTVYENTEPQTPLLRVQAI 3119

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
            D DLG+N ++ YS+    ++   +F ID  SG+I     L    Q  Y++TV+ATD G  
Sbjct: 3120 DADLGLNHKVQYSLV---SSAEGQFSIDELSGIISLEKPLDRELQAVYTLTVKATDQGLP 3176

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             K S     V  V   N   PVF+   Y  +++E A + + V  +
Sbjct: 3177 RKLSSVASVVVSVLDINDNPPVFEHREYGSSLTEDAPVGTEVLQV 3221



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 7/129 (5%)

Query: 45   DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            DINDN P            +      +++++ AT  D+ VNAEITY I  +S     KF 
Sbjct: 3191 DINDNPPVFEHREYGSSLTEDAPVGTEVLQVYATSRDIEVNAEITYKI--ISGNEHGKFT 3248

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
            I+P +G+I     L      +Y +TV+ATD G      +  V++ V   N  SPVF QNT
Sbjct: 3249 INPVTGMIFIIASLDYETSPEYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNT 3308

Query: 160  YDVNVSEGA 168
            Y   V E +
Sbjct: 3309 YTTVVGEDS 3317



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F V+A    G     +SV VS+ V   D+NDNAP     P     ++      ++V++
Sbjct: 2743 YQFYVLAHNLHGEHEIISSVDVSILVK--DVNDNAPVFDSNPYKAFIVENLPEGTKVVQV 2800

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGE--QYSITVQAT 129
             A D D+G N +++Y + H  +    K  F +D  +G + T G+L   +  +Y I V A 
Sbjct: 2801 RAFDLDVGSNGQVSYMLGHSQDLEEIKELFSVDRETGWVTTLGELDHEKTNKYHIVVVAY 2860

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G K  SS + +EV+V+   N   P F    Y   VSE    +  +A ++ +
Sbjct: 2861 DHGDKVLSSSSTIEVTVM-DVNDNPPRFTAEIYKGTVSEDDPPDGVIAILSTT 2912



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            + +NLDR+      +   V A ++     S  + + + + D+NDNAP+   P+  P  ++
Sbjct: 1062 TADNLDRE--TTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEVME 1119

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                   +V+I A D D   + ++TY I   +  G   F I+P++G+I TT + +  EQ 
Sbjct: 1120 NSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGF--FAINPKTGLITTTSRKLDREQQ 1177

Query: 123  S---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            S   + V  TD G  +   +  V V V   N   P F Q  Y + + E
Sbjct: 1178 SEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPE 1225



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPR-LPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L VN+ D+NDN P  L     + ++  E     I++++A D DLGVN E+ YSI  +++T
Sbjct: 777 LDVNVLDVNDNPPEFLQESYSVHLKENEEGHNAIIQVQAVDKDLGVNGEVKYSI--LTDT 834

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
            +  F I+  +GVI+    L   +Q++  + ++A D      Q    V +   V   N  
Sbjct: 835 DI--FTINSETGVIKAVAPLDREKQHTHLLKIEARDQAENEPQLFSHVLLKVTVEDVNDN 892

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
            PVF  + Y V V E   + + +  +
Sbjct: 893 PPVFIPSNYHVKVREDLPVGTVITWL 918



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + L D+NDN P  R         +A      +V+I A D D G N  I++
Sbjct: 2230 TGAHAEVFVDIILEDVNDNPPVFREKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISF 2289

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-V 145
             +   S      F ID  SG+IET   L     ++ ++ V+ATD G       + V + +
Sbjct: 2290 HLVETSGNISQYFHIDASSGLIETAKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGL 2349

Query: 146  PGPNTRSPVFQQNTYDVNVSE 166
               N   P F Q  Y+V +SE
Sbjct: 2350 TDLNDNPPAFIQQVYEVKISE 2370



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 37   VSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +S+ + L D+NDN P  +  +  ++I +  +    +  ++ATD D     ++ YSI  +S
Sbjct: 2343 ISVHIGLTDLNDNPPAFIQQVYEVKISELSKPGHFVTCVKATDADSSDTEKLEYSI--LS 2400

Query: 95   NTGLHKFRIDPRSGVIETT--GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F I+ ++GVI  +   K+I    YSI V  +D   +SS   V V+V    N  S
Sbjct: 2401 GNDDMNFIINSKTGVITVSYLRKMILNPFYSINVSVSDGVFRSSAQ-VHVTV-KSANLHS 2458

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F QN Y+V +SE + + + V  +
Sbjct: 2459 PKFGQNEYEVELSENSPVQTLVTEL 2483



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  N   F  QV         A    ++T+ + DIND AP           ++P  
Sbjct: 1803 SLDYEQTNIFHFTVQVHDMGYPRLFAENAANVTIYVVDINDCAPVFSKDVYETSLLLPTY 1862

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +++ + ATD+D G  +++ YSI    N G  KF IDP  G I         
Sbjct: 1863 K------GVRVITVNATDDDSGAYSQLIYSIIE-GNIG-DKFLIDPLKGTITVQNTTNLR 1914

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +Y +T++A+D G  SS T V+++V     + S  F Q +Y   V E A+   T+  I+
Sbjct: 1915 SRYELTIRASD-GRFSSLTSVKINVKESKES-SLKFTQRSYSATVLENATKVKTLTIIS 1971



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 98   LHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            L+ F I+P SGV+ TT K +  E    +++TVQAT+  G S+ + + V V    N   PV
Sbjct: 1676 LNSFDINPNSGVV-TTQKQLDFETLPSFTLTVQATNMAGLSTNSTLTVHV-RDENDNFPV 1733

Query: 155  FQQNTYDVNVSEGASINSTVAT 176
            F Q  Y   +SE A  NS V T
Sbjct: 1734 FAQTNYRGLISESAPPNSVVLT 1755



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
           R  I K+ ATD D+G N E  YS    ++     F I P SG I  TG+L   E   Y +
Sbjct: 134 RSSIAKVTATDADIGTNGEFYYSFKERTDM----FAIHPTSGTIVLTGRLDYTETKHYEM 189

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 190 EILAVDRGLK 199



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH 92
            V L V + D+NDN P    IP    ++  E       I  ++A D D+G++ ++ +S+  
Sbjct: 880  VLLKVTVEDVNDNPPVF--IPSNYHVKVREDLPVGTVITWLDAYDPDVGLSGQVRFSLLE 937

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
                G  KF +D  SG +    +L   E+  Y++T +A D G     SS   + V ++  
Sbjct: 938  ---NGDGKFEVDKVSGAVRIIQELDFEEKQVYNLTARAKDRGKPVSLSSACYINVELIDV 994

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N  +P+F +     ++ E   I + V T++     +G
Sbjct: 995  NENLHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDEDTG 1033



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 34   SVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            SV   +++ + D ND+ P     +  ++ P  +Q      Q++ I+  + +     ++ Y
Sbjct: 1406 SVSTQVSIKVIDTNDHRPEFSTSKYEVLIPEDVQPDTEILQVIAIDRDEKN-----KLIY 1460

Query: 89   SIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV- 144
            ++   ++   L KFR+DP +G + TT KL     +Q+ +TV   D      +    + + 
Sbjct: 1461 TLQSSTDPVSLKKFRMDPATGSLYTTEKLDHETMQQHILTVMVRDQDVPVLRNFARIVIN 1520

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   N  +P F  + Y+  V E A++ S V  ++
Sbjct: 1521 VTDTNDHAPWFTSSFYEGRVYESAAVGSAVLQVS 1554



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 29/175 (16%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LD +  N  K+   V+A +      S   ++ V + D+NDN PR       +I  G    
Sbjct: 2845 LDHEKTN--KYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRFTA----EIYKGTVSE 2898

Query: 69   Q------IVKIEATDNDL-GVNAEITYSI--------YHVSNTGLHKFRIDPRSGVIETT 113
                   I  +  TDND   +N E+T+ I        + + N   H++++  R  +    
Sbjct: 2899 DDPPDGVIAILSTTDNDTEEINKEVTFHITGGDPLGQFAIENMQ-HEWKVYVRKPLDRE- 2956

Query: 114  GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                  + Y + + ATD G  +++ +VEV V+   N  +PV ++ +Y   +SE A
Sbjct: 2957 ----VKDNYLLNITATD-GTFATKAVVEVKVLDA-NDNTPVCEKTSYAETISEDA 3005



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 47  NDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           N +AP    I P  I   E       I+ +EA D D G + ++ Y+I   ++     F +
Sbjct: 679 NTHAPHFKSILPSIIAIKENVPVGANIIHMEANDLDAGFSGKLLYAISGGNDDSC--FAV 736

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           D  +G ++    L     +QY++ +   D G   KSS  +++V+V+   N   P F Q +
Sbjct: 737 DMETGWLKILSPLDRELKDQYNLNITVYDLGIPQKSSWRLLDVNVL-DVNDNPPEFLQES 795

Query: 160 YDVNVSE 166
           Y V++ E
Sbjct: 796 YSVHLKE 802



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 20/106 (18%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS------ 123
            + +++A D D G+  ++TY I  +++     F I+ R       G+L   E++       
Sbjct: 2480 VTELKAVDEDKGLYGQLTYHI--INDFAKDNFNINER-------GQLFTAERFDREIPTN 2530

Query: 124  ----ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
                ++V A DTGGK    IV V ++   N   P F+   Y V+++
Sbjct: 2531 KVIPVSVMAKDTGGKVGFCIVNV-ILTDSNDNVPQFRATEYKVSIA 2575



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 57/140 (40%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVN 83
            PVSL+      V L D+N+N    P+     +  G  R  +      + + A D D G +
Sbjct: 978  PVSLSSACYINVELIDVNENL-HTPLFSEF-VSKGSIREDVPIGTPVMTVSAHDEDTGRD 1035

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQ 137
             EI YSI   S  G+  F I    G I T   L       Y +TV ATD G        Q
Sbjct: 1036 GEIRYSIRDGSGVGV--FTIHEEKGTIRTADNLDRETTSHYWLTVYATDRGVVPLSSFIQ 1093

Query: 138  TIVEVSVV--PGPNTRSPVF 155
              +E+  V    P T  PV+
Sbjct: 1094 IYIEIEDVNDNAPQTVEPVY 1113



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           +  + A D+D G N  ITYSI   +N     F ID  SGVI T   L   +    Y++ +
Sbjct: 451 VFSVHAVDHDEGENGFITYSI---ANINPQPFAIDAFSGVITTLEDLDYELMPRIYTLKI 507

Query: 127 QATDTG 132
           +A+D G
Sbjct: 508 RASDWG 513


>gi|128485445|ref|NP_001076057.1| protocadherin alpha-11 precursor [Pan troglodytes]
          Length = 949

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P        + +    A+  +V K+ ATD D GVN E+TYS+  + 
Sbjct: 226 VRLLVQVLDVNDNDPDFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G H F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 286 PNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  ++ +A I+VS   SG
Sbjct: 345 NSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSG 379



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++  A +    I  I  
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     +   Y + V A D G  
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRESVWAYELVVTARDGGSP 432

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
            +FQV AR+         V+L V + D NDNAP L     +  QAG A            
Sbjct: 530 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584

Query: 68  ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
                + K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRAL 636


>gi|440905275|gb|ELR55675.1| Protocadherin-11 X-linked, partial [Bos grunniens mutus]
          Length = 1008

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + L D NDNAP     P I +   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 484 LLIKLKDENDNAPVFTQ-PFISLSVPENNSPGTQLTKISATDADTGRNAEIHYLL----- 537

Query: 96  TGLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            G+    +F +D R+G++    KL     E+YS TV A D G  S  T   V V +   N
Sbjct: 538 -GIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLITNATVLVTILDQN 596

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SP+F  N Y+  V E    + TV  ITV+
Sbjct: 597 DNSPIFTHNEYNFYVPENLPRHGTVGLITVT 627



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----I 59
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 656 VIQPNISFDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-VVPPSNYSF 714

Query: 60  QIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++ +  A     +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 715 ELVSPSANPGTVVFTVVAIDNDTGMNAELRYSIVGGNTKGL--FMIDQTTGNITLKEKCV 772

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 773 LADLGLHKLIVKAKDLGQPDS 793



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 553 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPIFTHNEYNFY 610

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI   ++     F IDP+SGVI+    
Sbjct: 611 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDAND----DFTIDPQSGVIQPNIS 662

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 663 FDREKQESYTFNVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 705



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 233 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFKE-NEIEV 288

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA I +     VS+     F ++  +G+I     L 
Sbjct: 289 SIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLFHLNSTTGLITVKEPLD 348

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 349 REESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYIINPING-TVVLSENAP 407

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 408 LNTKIALITVT 418


>gi|328790298|ref|XP_394631.4| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Apis
            mellifera]
          Length = 3599

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT   + + SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 2114 QGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTE----VARVLATSKDTG 2169

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            VNA++ YSI  V      KF+ID R+GVI    +L       Y +T+QA D G    S+ 
Sbjct: 2170 VNADVYYSI--VGGNEHKKFQIDARTGVIIIAEQLDFERARDYFLTIQAVDGGIPPLSNH 2227

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V+   N  +P+F + +Y  ++ E A I   V  +  + L S
Sbjct: 2228 ATVNITVIDS-NDNAPIFSEVSYRASIREDAKIGEKVIQVFANDLDS 2273



 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 10/182 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
           +  S   LDR+  N  +   +V+ R+    + S    + + + DIND+ P        +Q
Sbjct: 118 ITTSGRKLDRE--NQAEHVLEVMVRDDGWPSLSSTTRVVIAVADINDHGPEFEQKFYTVQ 175

Query: 61  IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I A     + + ++ A D D+G N +I YSI      G  KF+I P +G++ +     AG
Sbjct: 176 IPASPSTDKPLFQVLAKDKDIGDNGKIQYSI--KGGRGKGKFKIHPTTGMVYSQRGFEAG 233

Query: 120 EQYSITVQATDTG--GKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           ++Y + ++A D G   +S QT V V V  VP  +   PVF+ N   V V+E   +   VA
Sbjct: 234 QEYEMMIRAADCGEPQRSHQTRVSVQVVEVPKESENPPVFKTNNQSVEVTESDKVGFLVA 293

Query: 176 TI 177
            +
Sbjct: 294 LV 295



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+     K+      +++   +      L + ++D+NDNAP+  M       P  ++ 
Sbjct: 1993 LDRE--TQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNAPKFTMQTYSATLPEDVEV 2050

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATD+D+G+N +I Y    + +   H F I   SG++ T GK +  E   
Sbjct: 2051 GTL---VTKVHATDDDIGINRKIRYEF--IDSADGH-FLIATDSGIV-TLGKPLDRETKA 2103

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G     ++  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 2104 MYNVTIQALDQGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTEVARVLA 2163

Query: 180  SRLASG 185
            +   +G
Sbjct: 2164 TSKDTG 2169



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++++ + DND  +N ++
Sbjct: 1182 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISVSEAAPFGTSVLRVSSRDNDTDINQQV 1238

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             Y+I + +      F IDP  GVI     L   A E +  TV A D G  S  +   V V
Sbjct: 1239 RYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWV 1298

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 1299 TVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 1335



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 9/136 (6%)

Query: 47   NDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            N + P+ P  P +++   E +   R +  + ATD+D G    + YSI   S      F I
Sbjct: 1405 NRHNPKFPN-PVVEVTVFENQLPGRLVTSVIATDDDFGEYGTVVYSI--PSELMKEIFDI 1461

Query: 104  DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            +  +G I T  KL   EQ  Y I V ATD GG+S   +V V  V   N  SPVF    Y 
Sbjct: 1462 NRLTGEIVTRKKLNREEQKLYEIPVMATDGGGRSGFVMVRVK-VGDENDNSPVFLLREYK 1520

Query: 162  VNVSEGASINSTVATI 177
             ++    +IN++   +
Sbjct: 1521 ASIHGNLTINTSFLKV 1536



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 10/158 (6%)

Query: 27  EKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
           + QGT A    + + V ++D ND+AP   +   IQ +  E       +V++ A D D G 
Sbjct: 451 KDQGTPAKRNYARVVVTVHDHNDHAPEF-ISEIIQGKVYETSPIGAAVVQVYAIDRDKGD 509

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIV 140
           NA+ITYSI    N G + F IDP  GVI    +  L A  +Y + V+ATD G  +    V
Sbjct: 510 NAKITYSITS-GNVG-NMFTIDPNLGVIRVARELDLSASSEYILLVKATDHGSPALANTV 567

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V V V   +   P F Q      + E   + + V  +
Sbjct: 568 PVHVMVTMADNAPPRFIQKELSAEIYENQQVGTYVKHV 605



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDND 79
            V+A        +    +++ + D ND+AP+     P  I   E   +   I+KI A D+D
Sbjct: 1693 VLAETDSSPPLTALAEISLQVLDENDHAPKFES-NPYGISVAENVEEGTSILKIIAHDDD 1751

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N E+ YS         + F +D  +G I T  +L   +Q  Y   V ATD G     
Sbjct: 1752 LGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVVATDNGNPKHF 1811

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                V V +   N   P F  + Y+  V+E A
Sbjct: 1812 ARTSVHVKLKDYNDNPPAFVDDRYEATVNEDA 1843



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 16/162 (9%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATD 77
            R Q+  RE+   A    V + V + DINDN P    +P   + + EA++   I K+ A D
Sbjct: 970  RSQMPGRERPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVEAQKGDIITKVHAID 1026

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSS 136
             D G N E+ Y +          F++  ++G I     L     +Y +T+ A D GG + 
Sbjct: 1027 MDSGDNGEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITP 1082

Query: 137  QTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +I   V V V+   +   PVF +  Y  +V E   I+S +A
Sbjct: 1083 CSIEVPVNVKVI---DRSMPVFDKQFYTDSVLESIEIHSPLA 1121



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        +I  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 1917 VTVQILDVNDNPPYCLRYRYREILSEGSHPGTYVLTVLATDYDDEPNAKLRFYLTGDNND 1976

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               KF +D  +GV++T G+L    Q  YS+T    D    S +   ++ + +   N  +P
Sbjct: 1977 ---KFSLDKETGVLKTIGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNAP 2033

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
             F   TY   + E   + + V  +
Sbjct: 2034 KFTMQTYSATLPEDVEVGTLVTKV 2057



 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L   +  QY +TV+ATD+  G  ++ 
Sbjct: 1130 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 1187

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +V + V+   N   P F Q++Y+++VSE A   ++V  ++
Sbjct: 1188 LVSILVL-DVNDCPPEFTQDSYNISVSEAAPFGTSVLRVS 1226



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)

Query: 18  KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGEAR 67
           KF F V   +  K   ++     + + + D+ND  P+          ++P  +  A    
Sbjct: 758 KFTFHVKVSDLGKPKLSSETTAKVMILVTDVNDCPPKFLENDYNTTVLLPTYKNVA---- 813

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ 127
             +V++ A D D      + Y I  +     H F ID ++GVI         + Y + V+
Sbjct: 814 --VVRVSAVDPDSSEGVPLRYDI--IDGNKAHTFDIDSQTGVITVYNPERMKKSYLLRVR 869

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +D G  SS   V V V    N+   +FQ++ Y+  + E ++  +TVA + V
Sbjct: 870 VSD-GKYSSVCQVNVIVEKSENS-GLMFQKDVYEGTIPENSTRITTVAVVNV 919



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F ++P +G+I    +L   +   Y++T+ AT+     +   V V V+   N  +P F Q 
Sbjct: 626 FFVNPSTGIIVIKNELDYEKTKFYNLTIAATNMASAKAHCNVIVHVL-DRNDNAPRFLQA 684

Query: 159 TYDVNVSEGASINSTVATITVSRL 182
            Y   +SEGA+I S V T T + L
Sbjct: 685 VYSGEISEGATIGSLVLTNTSTPL 708


>gi|125835070|ref|XP_693952.2| PREDICTED: protocadherin Fat 1-like [Danio rerio]
          Length = 4472

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 21/180 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            + ++E+ DR+ P     R  ++A++  G      V   V L+D+NDN+P+         +
Sbjct: 2541 IYTEESFDRENPEEKIIRISLMAKDGGGLLGFCNV--IVILSDVNDNSPKFKHSEYKVTV 2598

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P    +   +   ++K  A D D G NA+I Y+I     + +  F I   SG I T   L
Sbjct: 2599 P----RDAPSSTTVIKTTAVDEDEGSNADIVYTI----ESDIDHFEIHSLSGAIVTKESL 2650

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVS--VVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            I  E   YS  V+A D+G    Q+I+ VS  +VP P T  P F + +  + +SE  ++ +
Sbjct: 2651 IGLENGLYSFFVKAKDSGSPPKQSIIPVSIRIVP-PETSIPKFAEPSLWLELSEDLAVGT 2709



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITY 88
            T A+  V + + L D+NDNAP+    +  I I ++      ++++ A D D   NA + Y
Sbjct: 2254 TGANSDVFVDIILEDVNDNAPKFEAAVYSISISESTVIGTSVLQVVAMDPDAQSNAILFY 2313

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-V 145
             ++    +    FRID  +GVI T G L      Q+ + V+A D G     + V+V+V +
Sbjct: 2314 KLHERDGSTSDHFRIDAETGVIWTAGLLDHETQSQHDLIVKAVDGGAIQLSSEVQVTVYI 2373

Query: 146  PGPNTRSPVFQQNTYDVNVSEGAS 169
               N   P+F Q  Y+  +S+ +S
Sbjct: 2374 TDLNDNPPIFAQQLYNATISKISS 2397



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 15/185 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
             + + E LD +  +  +    V+ R++     S  V + +N+ D NDN P          
Sbjct: 1507 FLYTTEKLDHETMH--RHILTVMVRDQGVPVKSNVVRVIINVEDSNDNPPWFTSSQYAAR 1564

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI 117
              +       ++++ A D D   NAEI YSI    ++G H   F ID  SG+I    +L 
Sbjct: 1565 VFETAAIGSSVLQVTALDKDKSFNAEILYSI----DSGNHGTSFIIDQSSGIITVARELD 1620

Query: 118  AG--EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                +QY + ++A+D G    S+ T V ++V    NT+ P F  N+    VSE   + S 
Sbjct: 1621 CETRDQYELIIKASDKGEPSLSAVTAVRITVTISDNTK-PKFPSNSLSAEVSENVPVGSF 1679

Query: 174  VATIT 178
            V  ++
Sbjct: 1680 VTLVS 1684



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 14/154 (9%)

Query: 34   SVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            S+   + + + D N++ P+       +  P +IQ G    +I++I ATD D   N +++Y
Sbjct: 1431 SISTQVIIQVLDTNEHRPKFSQNHYEISIPEEIQPG---MKILEINATDKD--ENNKLSY 1485

Query: 89   SIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV- 144
            ++   ++   L KFR+DP +G + TT KL      ++ +TV   D G      +V V + 
Sbjct: 1486 TLLSSTDLFSLKKFRLDPGTGFLYTTEKLDHETMHRHILTVMVRDQGVPVKSNVVRVIIN 1545

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   N   P F  + Y   V E A+I S+V  +T
Sbjct: 1546 VEDSNDNPPWFTSSQYAARVFETAAIGSSVLQVT 1579



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 13/153 (8%)

Query: 38   SLTVNLNDINDNAP---RLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D ND+ P   R   I   P  +  G    +++K+ A   D  + ++ITYS   
Sbjct: 3206 SVVVTVLDANDHPPVFERREYISTVPEDVTIG---TKLLKVFAASKDRQMTSQITYSFSS 3262

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             +  G   FRID ++G I     L   E  Q+ +TV+AT  G +S   +  VS+ +   N
Sbjct: 3263 GNEQG--AFRIDSQTGDIFVMEPLDYEESSQHYLTVKATVGGKQSLSDMATVSIHLQDIN 3320

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              SPVF Q  Y   VSE   + STV T+  + L
Sbjct: 3321 DNSPVFSQKIYSAVVSEDTRLASTVLTVLANDL 3353



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 19/184 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PM 55
            ++V   + LDR+  +   F    I        A   V +TV   D NDN+P         
Sbjct: 2967 WVVAVSKTLDREERD---FYLLNITATDGTFVAKAAVEITVL--DANDNSPVCEKDVYAQ 3021

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              P  +  G   + I+++ ATD D+  NAEITY +   S +G   F ID ++G ++T   
Sbjct: 3022 AVPEDVLIG---KHILQVSATDADIQSNAEITYQL---SGSGAESFTIDSKTGAVKTLAT 3075

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L     + Y++TV+A D      Q  + ++ V   N  +P F  + + V++ +     + 
Sbjct: 3076 LDREVTDVYNLTVRAVDKDNHFCQASLLIT-VEDANDNAPKFTSDPHHVSIYQNTQPGTY 3134

Query: 174  VATI 177
            VA +
Sbjct: 3135 VARL 3138



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 23/172 (13%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVK 72
           ++ F+V+  +++ +   V     V+++D+N+NAP   +      +A  A        ++ 
Sbjct: 432 QYEFEVVISDRRASTKVV-----VSVSDMNNNAP---VFQKSNYEASIAEHVPIGTSVLT 483

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQAT 129
           + ATD D G N  +TYSI +V+      F +D  +GVI TT  L       ++S+ ++A+
Sbjct: 484 VSATDMDDGENGYVTYSIVNVNK---QPFVVDYFTGVISTTEDLDYETMPSKFSLRIRAS 540

Query: 130 DTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           D G    + ++TIV +S+    N   P F+    DV V     ++  +  ++
Sbjct: 541 DWGSPFRREAETIVSISLT-NLNDNKPQFENIDCDVRVPRSLGVDEQIIVVS 591



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ ++E LDR+  N   +   V A ++     S  V + + + D+NDNAP    P+  P 
Sbjct: 1089 IITTQEILDRETNN--HYWLTVYATDQGIVPLSSFVEVYIEVQDVNDNAPLTTEPVYFPS 1146

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       +++I+A D D   +  ++Y I   +  G   F ID ++G++ TT + +  
Sbjct: 1147 VSENSPKGVSVIQIQAFDLDSESSENLSYKISSGNPQGF--FAIDFQTGLVTTTSRKLDR 1204

Query: 120  E---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            E   ++ + +  +D G  S  T+V V V V   N  SP F +  + + + E
Sbjct: 1205 EKQAEHLLEITVSDDGSPSKSTVVHVIVNVLDENDNSPQFLEKIFKIRLVE 1255



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPP-IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            SL + + D NDNAP+    P  + I Q  +    + ++EA D D+G+N +I YS +  S 
Sbjct: 3101 SLLITVEDANDNAPKFTSDPHHVSIYQNTQPGTYVARLEAFDADIGMNGKIRYS-FEDSA 3159

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNT 150
             GL  F I+  SG+I     L       + + V+ATD G     SS   V V+V+   N 
Sbjct: 3160 GGL--FSIEESSGIISLERSLDKQMKAMHVLRVRATDQGFPHRLSSLGSVVVTVLDA-ND 3216

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              PVF++  Y   V E  +I + +  +
Sbjct: 3217 HPPVFERREYISTVPEDVTIGTKLLKV 3243



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 12/184 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ-IQAGEA 66
            LDR+     +   ++   +    + S  V + VN+ D NDN+P+ L  I  I+ ++  EA
Sbjct: 1202 LDRE--KQAEHLLEITVSDDGSPSKSTVVHVIVNVLDENDNSPQFLEKIFKIRLVERLEA 1259

Query: 67   RRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI 124
                 I ++ A D D    ++I+Y+I      G  KF I+P +G + +     AGE   I
Sbjct: 1260 VEWEPIYRVIAYDRDESPFSDISYAIEEGEEQG--KFFIEPTTGFVFSKEAFSAGEYNII 1317

Query: 125  TVQATDTG--GKSSQTIVEVSVVPGPN--TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            T++A+D G   KSS   + +  +P P    ++  F++     +V E   +   V  I+  
Sbjct: 1318 TIKASDNGKPSKSSICRLHIEWIPKPKLAKQALAFEEIPLSFSVMENDPVAHMVGVISAQ 1377

Query: 181  RLAS 184
             L S
Sbjct: 1378 PLDS 1381



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
           ++ T A     + V + D+ND  P   P      + +   AR  I ++ ATD D G N E
Sbjct: 121 ERHTGAEAQTQVKVQILDMNDLRPLFSPTTYSFFVPENSAARTSIGRVSATDADTGTNGE 180

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             +S    ++     F I P SGVI  TGKL   E   Y I V A D G K
Sbjct: 181 YYFSFKEWTDM----FSIHPTSGVITLTGKLDYSEMALYEIDVLAVDRGLK 227



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 14/152 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIY 91
            V ++V+L D+NDN+P+       + Q+  A        +V+++ATD D  +N +ITY+++
Sbjct: 2782 VDVSVHLKDVNDNSPQFE---SFRYQSCIAENLPKGTSVVQVKATDLDSWLNGQITYALH 2838

Query: 92   HVSN--TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGKSSQTIVEVSVV 145
                    L  F ++  +G I T  ++     +QY ITV ATD   G + + T V    V
Sbjct: 2839 ENQQPPDVLQLFSVNSETGWITTLMEIDREKTDQYRITVVATDGAQGLQMTGTTVVEVTV 2898

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F +  +   V E  S   TV TI
Sbjct: 2899 VDTNDNPPLFTEAVFKGAVREDESTPGTVVTI 2930



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 7/119 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
            ++K+ A D D G + E+ YSI     +GL  F I+  SG+I TT +++  E    Y +TV
Sbjct: 1052 VLKVAAHDEDSGRDGEVRYSIR--GGSGLGVFTINEESGII-TTQEILDRETNNHYWLTV 1108

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             ATD G     + VEV + V   N  +P+  +  Y  +VSE +    +V  I    L S
Sbjct: 1109 YATDQGIVPLSSFVEVYIEVQDVNDNAPLTTEPVYFPSVSENSPKGVSVIQIQAFDLDS 1167



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 26/176 (14%)

Query: 21   FQVIAR--EKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            F++I    ++ G      V + V + D+NDNAP     P    +Q+          K+  
Sbjct: 2041 FEIIVEVIKEPGLNGPAHVLVKVQVEDVNDNAPFFVDQPYHAVVQVDQ-TVGSVFAKVTT 2099

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK-FRIDP-------RSGVIETTGKLIAGEQYSITVQ 127
             D D+G NAEITY +      G  K F+++P       R   +E+ GK      Y I + 
Sbjct: 2100 VDRDIGKNAEITYYL-----KGHDKYFQVNPFGEISLKRPLELESIGK------YVINIT 2148

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            A D G     +  EV V+   N  +P+F++  Y + + E   + +++  +  ++ A
Sbjct: 2149 AQDEGEPPLFSNAEV-VISVVNKATPIFERPFYKIEILENVLVGTSILQVVANQSA 2203



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F I+P +G+I T+G + A +  QY   V  +D    S++ +V VS +   N  +PVFQ++
Sbjct: 410 FIINPNTGLISTSGPIKAEKVSQYEFEVVISDRRA-STKVVVSVSDM---NNNAPVFQKS 465

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            Y+ +++E   I ++V T++ + +  G
Sbjct: 466 NYEASIAEHVPIGTSVLTVSATDMDDG 492



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L +NL D+NDN P   P    I+++        ++ +E  D DLG++ ++ YS+   +
Sbjct: 910  VLLRINLEDVNDNPPMFVPQHYHIRVREDIPVGTLVLWLETHDPDLGLSGQVRYSL---T 966

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVP-GP 148
            +     F++D  SG +  +  L    +  Y++T +A D G     SS   ++V +V    
Sbjct: 967  DGDDGNFQVDKMSGAVYVSQTLDFETRQIYNLTAKAKDRGRPNPLSSSCFIQVEIVAVNK 1026

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   P F        V E AS+ ++V  +      SG
Sbjct: 1027 NMYRPNFPFFVDWGTVLEDASVGTSVLKVAAHDEDSG 1063



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 6/70 (8%)

Query: 100  KFRIDPRSGVIETTGKLIAGEQ--YSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F ++  SG I   G L A  Q  Y++TV+ATD T   S+Q I++V      N   P F 
Sbjct: 1395 RFDVEKASGTIIIAGALDAERQSNYNLTVEATDGTRSISTQVIIQVL---DTNEHRPKFS 1451

Query: 157  QNTYDVNVSE 166
            QN Y++++ E
Sbjct: 1452 QNHYEISIPE 1461



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 101  FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SG + T  KL       Y + VQ TD    SS   V +  +   N  +PVF Q+
Sbjct: 1704 FDINPNSGAVITRKKLDFETLSSYKLIVQGTDMAEMSSSVTVNI-YLKDENDNAPVFTQS 1762

Query: 159  TYDVNVSEGASINSTV 174
             Y   +SE A I S V
Sbjct: 1763 EYTGFISESAIIRSVV 1778



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            NLD +      FR QV         A    ++T+++ +IND AP+          ++P  
Sbjct: 1828 NLDYEQRRIFNFRVQVHDTGNPRLFAQDTANVTIHIININDCAPKFTQDSYEATLLLPTY 1887

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +++ ++ATD D     ++ + I    N G +KF +DP  G I         
Sbjct: 1888 K------GVKVITVKATDEDSLPGNKLHFEIVD-GNIG-NKFWLDPTFGDIFVQNTTQLR 1939

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             +Y +TVQ +D G       V+V+ V    + +  F Q+ +   V E A+   T+A ++V
Sbjct: 1940 SRYRLTVQVSD-GSFIGCANVKVN-VKDNKSHNLKFTQDIFTAQVQENATEKKTLAVLSV 1997



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 13/147 (8%)

Query: 39  LTVNLNDINDNAPR-LPMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDN+P  L     + I    A    I+++EA D DLGVN  + YS      T
Sbjct: 807 LDVKILDANDNSPEFLQRKYIVDISEDTAIGTDIIQLEAKDKDLGVNGMVRYSFL----T 862

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
              KF I   +G++    +L+  E    + + V A D      + +  V +   +   N 
Sbjct: 863 ETDKFNIHEETGIVSVM-RLLDREANPVFVLRVAAFDAAIDEPKLVSTVLLRINLEDVND 921

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATI 177
             P+F    Y + V E   + + V  +
Sbjct: 922 NPPMFVPQHYHIRVREDIPVGTLVLWL 948


>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
            tropicalis]
          Length = 4590

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 19/177 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+  +  +   +V   +K  T A V V +TV   D+NDN P    LP    +QI A E
Sbjct: 2040 FDREEEDLFELVVEVSDEQKPPTVAHVLVQVTVE--DVNDNNPVFVNLPYYAMVQIDAPE 2097

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
                I  + A D D+G N EITY +   S     +F+I P SG I+   +     + ++Y
Sbjct: 2098 GHL-IRHVTAVDRDIGKNGEITYYLKEHS----QQFQIGP-SGEIKLKKQFDPDSSNKEY 2151

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ITV A D+G    SS+ +V ++V+   N   PVF+   Y   ++E A+++S V  +
Sbjct: 2152 FITVVAKDSGNPSYSSEVVVPITVM---NKAMPVFENPFYSAEIAENANLHSPVVHV 2205



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 15/166 (9%)

Query: 32   AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            A S    + V + D NDN P         RLP     + +    R  I ++ A D D G 
Sbjct: 1225 AKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPEREKPERERNAKRDPIYRVVAVDKDDGA 1284

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIV 140
            NAEI+YSI      G  KF I+P++GV+ +     AGE   ++++A D G   KSS T +
Sbjct: 1285 NAEISYSIEEGDEHG--KFFIEPKTGVVSSKKSSAAGEYDILSIKAVDNGRPQKSSTTRL 1342

Query: 141  EVSVV--PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             +  +  P P+     F++ ++  +V E   +   +  IT   L S
Sbjct: 1343 HIEWIAKPAPSAEPITFEEPSFSFSVMESDPVAHMIGVITTEPLGS 1388



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E  DR+ P        V+A++  G      V+  V L D NDN P+          
Sbjct: 2549 LFTAERFDREIPTNKVIPVSVMAKDTGGKVGFCIVN--VILTDSNDNVPQFRATEYKVSI 2606

Query: 63   AGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A +  R   IVK+ A+D+D G NA+I YSI   S +    F I   SG I T   LI  E
Sbjct: 2607 ASDVPRGTPIVKVIASDSDEGANADIFYSIEAQSASVEENFGISQSSGTIITKESLIGLE 2666

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               YS  V+ATD G    +++V V + +  P    P F +  Y +++SE  ++ + +  +
Sbjct: 2667 DEVYSFFVKATDGGTPQKESLVPVFIRILPPEVVLPKFSEPFYTLSISEDTAVGTELDVV 2726



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 9/141 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEIT 87
            GT A+  V + V + D NDN P        +  + +A   R I+++ A+D D+  NAEI 
Sbjct: 3002 GTFATKAV-VEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADIRSNAEII 3060

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVV 145
            Y+++ V   G  KF ++P +G ++T+  L     E Y + V+ATD GG+  Q  VE++ +
Sbjct: 3061 YTLHGV---GAEKFHLNPFTGELKTSLPLDREILEVYHLMVKATDGGGRFCQAAVELT-L 3116

Query: 146  PGPNTRSPVFQQNTYDVNVSE 166
               N  +P F  + Y V V E
Sbjct: 3117 EDVNDNAPEFSADPYTVTVYE 3137



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 7/145 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + +N+ D ND+AP            ++      ++++ A D D G NAE+ YSI   S  
Sbjct: 1549 IVINVTDTNDHAPWFTSSFYEGRVYESAAVGSAVLQVSALDKDKGKNAEVGYSIE--SGN 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              + F IDP  G+I+T  +L       Y + V+ATD G      I  + + V   N  +P
Sbjct: 1607 TANAFTIDPVLGIIKTAKELDRNNHGRYELVVKATDHGIPPLSQITSIHIFVTISNNAAP 1666

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F +  Y   +SE A + S VA ++
Sbjct: 1667 KFTKKEYSSEISETAHVGSFVAMLS 1691



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 7/129 (5%)

Query: 45   DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            DINDN P            +      +++++ AT  D+ VNAEITY I  +S     KF 
Sbjct: 3223 DINDNPPVFEHREYGSSLTEDAPVGTEVLQVYATSRDIEVNAEITYKI--ISGNEHGKFT 3280

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
            I+P +G+I     L      +Y +TV+ATD G      +  V++ V   N  SPVF QNT
Sbjct: 3281 INPVTGMIFIIASLDYETSPEYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNT 3340

Query: 160  YDVNVSEGA 168
            Y   V E +
Sbjct: 3341 YTTVVGEDS 3349



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEAT 76
            +   V A +  G      V LT  L D+NDNAP     P      +  E +  +++++A 
Sbjct: 3094 YHLMVKATDGGGRFCQAAVELT--LEDVNDNAPEFSADPYTVTVYENTEPQTPLLRVQAI 3151

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
            D DLG+N ++ YS+    ++   +F ID  SG+I     L    Q  Y++TV+ATD G  
Sbjct: 3152 DADLGLNHKVQYSLV---SSAEGQFSIDELSGIISLEKPLDRELQAVYTLTVKATDQGLP 3208

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             K S     V  V   N   PVF+   Y  +++E A + + V  +
Sbjct: 3209 RKLSSVASVVVSVLDINDNPPVFEHREYGSSLTEDAPVGTEVLQV 3253



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F V+A    G     +SV VS+ V   D+NDNAP     P     ++      ++V++
Sbjct: 2775 YQFYVLAHNLHGEHEIISSVDVSILVK--DVNDNAPVFDSNPYKAFIVENLPEGTKVVQV 2832

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGE--QYSITVQAT 129
             A D D+G N +++Y + H  +    K  F +D  +G + T G+L   +  +Y I V A 
Sbjct: 2833 RAFDLDVGSNGQVSYMLGHSQDLEEIKELFSVDRETGWVTTLGELDHEKTNKYHIVVVAY 2892

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G K  SS + +EV+V+   N   P F    Y   VSE    +  +A ++ +
Sbjct: 2893 DHGDKVLSSSSTIEVTVM-DVNDNPPRFTAEIYKGTVSEDDPPDGVIAILSTT 2944



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            + +NLDR+      +   V A ++     S  + + + + D+NDNAP+   P+  P  ++
Sbjct: 1094 TADNLDRE--TTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEVME 1151

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                   +V+I A D D   + ++TY I   +  G   F I+P++G+I TT + +  EQ 
Sbjct: 1152 NSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGF--FAINPKTGLITTTSRKLDREQQ 1209

Query: 123  S---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            S   + V  TD G  +   +  V V V   N   P F Q  Y + + E
Sbjct: 1210 SEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPE 1257



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPR-LPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L VN+ D+NDN P  L     + ++  E     I++++A D DLGVN E+ YSI  +++T
Sbjct: 809 LDVNVLDVNDNPPEFLQESYSVHLKENEEGHNAIIQVQAVDKDLGVNGEVKYSI--LTDT 866

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
            +  F I+  +GVI+    L   +Q++  + ++A D      Q    V +   V   N  
Sbjct: 867 DI--FTINSETGVIKAVAPLDREKQHTHLLKIEARDQAENEPQLFSHVLLKVTVEDVNDN 924

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
            PVF  + Y V V E   + + +  +
Sbjct: 925 PPVFIPSNYHVKVREDLPVGTVITWL 950



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + L D+NDN P  R         +A      +V+I A D D G N  I++
Sbjct: 2262 TGAHAEVFVDIILEDVNDNPPVFREKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISF 2321

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-V 145
             +   S      F ID  SG+IET   L     ++ ++ V+ATD G       + V + +
Sbjct: 2322 HLVETSGNISQYFHIDASSGLIETAKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGL 2381

Query: 146  PGPNTRSPVFQQNTYDVNVSE 166
               N   P F Q  Y+V +SE
Sbjct: 2382 TDLNDNPPAFIQQVYEVKISE 2402



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 37   VSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +S+ + L D+NDN P  +  +  ++I +  +    +  ++ATD D     ++ YSI  +S
Sbjct: 2375 ISVHIGLTDLNDNPPAFIQQVYEVKISELSKPGHFVTCVKATDADSSDTEKLEYSI--LS 2432

Query: 95   NTGLHKFRIDPRSGVIETT--GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F I+ ++GVI  +   K+I    YSI V  +D   +SS   V V+V    N  S
Sbjct: 2433 GNDDMNFIINSKTGVITVSYLRKMILNPFYSINVSVSDGVFRSSAQ-VHVTV-KSANLHS 2490

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F QN Y+V +SE + + + V  +
Sbjct: 2491 PKFGQNEYEVELSENSPVQTLVTEL 2515



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  N   F  QV         A    ++T+ + DIND AP           ++P  
Sbjct: 1835 SLDYEQTNIFHFTVQVHDMGYPRLFAENAANVTIYVVDINDCAPVFSKDVYETSLLLPTY 1894

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +++ + ATD+D G  +++ YSI    N G  KF IDP  G I         
Sbjct: 1895 K------GVRVITVNATDDDSGAYSQLIYSIIE-GNIG-DKFLIDPLKGTITVQNTTNLR 1946

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +Y +T++A+D G  SS T V+++V     + S  F Q +Y   V E A+   T+  I+
Sbjct: 1947 SRYELTIRASD-GRFSSLTSVKINVKESKES-SLKFTQRSYSATVLENATKVKTLTIIS 2003



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 98   LHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            L+ F I+P SGV+ TT K +  E    +++TVQAT+  G S+ + + V V    N   PV
Sbjct: 1708 LNSFDINPNSGVV-TTQKQLDFETLPSFTLTVQATNMAGLSTNSTLTVHV-RDENDNFPV 1765

Query: 155  FQQNTYDVNVSEGASINSTVAT 176
            F Q  Y   +SE A  NS V T
Sbjct: 1766 FAQTNYRGLISESAPPNSVVLT 1787



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
           R  I K+ ATD D+G N E  YS    ++     F I P SG I  TG+L   E   Y +
Sbjct: 166 RSSIAKVTATDADIGTNGEFYYSFKERTDM----FAIHPTSGTIVLTGRLDYTETKHYEM 221

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 222 EILAVDRGLK 231



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH 92
            V L V + D+NDN P    IP    ++  E       I  ++A D D+G++ ++ +S+  
Sbjct: 912  VLLKVTVEDVNDNPPVF--IPSNYHVKVREDLPVGTVITWLDAYDPDVGLSGQVRFSLLE 969

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
                G  KF +D  SG +    +L   E+  Y++T +A D G     SS   + V ++  
Sbjct: 970  ---NGDGKFEVDKVSGAVRIIQELDFEEKQVYNLTARAKDRGKPVSLSSACYINVELIDV 1026

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N  +P+F +     ++ E   I + V T++     +G
Sbjct: 1027 NENLHTPLFSEFVSKGSIREDVPIGTPVMTVSAHDEDTG 1065



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 34   SVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            SV   +++ + D ND+ P     +  ++ P  +Q      Q++ I+  + +     ++ Y
Sbjct: 1438 SVSTQVSIKVIDTNDHRPEFSTSKYEVLIPEDVQPDTEILQVIAIDRDEKN-----KLIY 1492

Query: 89   SIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV- 144
            ++   ++   L KFR+DP +G + TT KL     +Q+ +TV   D      +    + + 
Sbjct: 1493 TLQSSTDPVSLKKFRMDPATGSLYTTEKLDHETMQQHILTVMVRDQDVPVLRNFARIVIN 1552

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   N  +P F  + Y+  V E A++ S V  ++
Sbjct: 1553 VTDTNDHAPWFTSSFYEGRVYESAAVGSAVLQVS 1586



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 29/175 (16%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LD +  N  K+   V+A +      S   ++ V + D+NDN PR       +I  G    
Sbjct: 2877 LDHEKTN--KYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRFTA----EIYKGTVSE 2930

Query: 69   Q------IVKIEATDNDL-GVNAEITYSI--------YHVSNTGLHKFRIDPRSGVIETT 113
                   I  +  TDND   +N E+T+ I        + + N   H++++  R  +    
Sbjct: 2931 DDPPDGVIAILSTTDNDTEEINKEVTFHITGGDPLGQFAIENMQ-HEWKVYVRKPLDRE- 2988

Query: 114  GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                  + Y + + ATD G  +++ +VEV V+   N  +PV ++ +Y   +SE A
Sbjct: 2989 ----VKDNYLLNITATD-GTFATKAVVEVKVLDA-NDNTPVCEKTSYAETISEDA 3037



 Score = 38.9 bits (89), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 47  NDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           N +AP    I P  I   E       I+ +EA D D G + ++ Y+I   ++     F +
Sbjct: 711 NTHAPHFKSILPSIIAIKENVPVGANIIHMEANDLDAGFSGKLLYAISGGNDDSC--FAV 768

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           D  +G ++    L     +QY++ +   D G   KSS  +++V+V+   N   P F Q +
Sbjct: 769 DMETGWLKILSPLDRELKDQYNLNITVYDLGIPQKSSWRLLDVNVL-DVNDNPPEFLQES 827

Query: 160 YDVNVSE 166
           Y V++ E
Sbjct: 828 YSVHLKE 834



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 20/106 (18%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS------ 123
            + +++A D D G+  ++TY I  +++     F I+ R       G+L   E++       
Sbjct: 2512 VTELKAVDEDKGLYGQLTYHI--INDFAKDNFNINER-------GQLFTAERFDREIPTN 2562

Query: 124  ----ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
                ++V A DTGGK    IV V ++   N   P F+   Y V+++
Sbjct: 2563 KVIPVSVMAKDTGGKVGFCIVNV-ILTDSNDNVPQFRATEYKVSIA 2607



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 57/140 (40%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVN 83
            PVSL+      V L D+N+N    P+     +  G  R  +      + + A D D G +
Sbjct: 1010 PVSLSSACYINVELIDVNENL-HTPLFSEF-VSKGSIREDVPIGTPVMTVSAHDEDTGRD 1067

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GKSSQ 137
             EI YSI   S  G+  F I    G I T   L       Y +TV ATD G        Q
Sbjct: 1068 GEIRYSIRDGSGVGV--FTIHEEKGTIRTADNLDRETTSHYWLTVYATDRGVVPLSSFIQ 1125

Query: 138  TIVEVSVV--PGPNTRSPVF 155
              +E+  V    P T  PV+
Sbjct: 1126 IYIEIEDVNDNAPQTVEPVY 1145



 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           +  + A D+D G N  ITYSI   +N     F ID  SGVI T   L   +    Y++ +
Sbjct: 483 VFSVHAVDHDEGENGFITYSI---ANINPQPFAIDAFSGVITTLEDLDYELMPRIYTLKI 539

Query: 127 QATDTG 132
           +A+D G
Sbjct: 540 RASDWG 545


>gi|74206309|dbj|BAE24900.1| unnamed protein product [Mus musculus]
          Length = 808

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 226 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 379



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   + AG A  ++V       
Sbjct: 530 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSELVSRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 636



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 404 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 460

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 461 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 493


>gi|195171399|ref|XP_002026493.1| GL15491 [Drosophila persimilis]
 gi|194111399|gb|EDW33442.1| GL15491 [Drosophila persimilis]
          Length = 1761

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 14/175 (8%)

Query: 3   VVSKENLDRDPPNPG--KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           V+    LD D P+P   KF F ++A  K    A   V   ++L D NDNAP     P  +
Sbjct: 372 VLDASRLDYDVPDPSYRKFEFDLVALVKGVQKAKARVE--IHLLDANDNAPVFDQ-PTYR 428

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             A E       I  ++ATD+D G   E  +  Y +   G   F +DP +G +    +L 
Sbjct: 429 FTAAENLATDYLIGHVKATDSDSG---EFGHVRYVLKGFGADNFNVDPETGGLYLQRQLD 485

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +Q  YS+TV A D GG+ S   + V VV   N   P F+   Y   + EGA+I
Sbjct: 486 YEKQSSYSLTVVAIDGGGRESNANLFVGVV-DVNDNHPNFEHKEYSRTIREGAAI 539



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 19/128 (14%)

Query: 20   RFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQI 70
            R QV A +  G    A    V L +++ D+NDNAP         +IP    +  +    +
Sbjct: 1075 RLQVKAEDSPGKPTDAKQSVVDLLIDVLDVNDNAPVFTQKKYSTVIP----ENAQIDSFV 1130

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA---GEQYSITV 126
            +++EA D D G+  E+ Y + +     GL  F+I+P++G++ T   L      E Y + V
Sbjct: 1131 LQLEALDADEGLGGEVRYELVNEGEANGL--FKINPQTGLLSTRRNLTGKGRAEPYILIV 1188

Query: 127  QATDTGGK 134
            +A D G +
Sbjct: 1189 RAQDNGSQ 1196



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 20/194 (10%)

Query: 3    VVSKENLDRD----PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--I 56
            V+ K+ LD +      N  +F  QV A       +++   L + + ++NDN+PR      
Sbjct: 941  VILKKRLDYEVLAETGNGPEFELQVRASSADRQRSTIS-RLNITVENVNDNSPRFEQSSY 999

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH---VSNTGLHK--FRIDPRSG-VI 110
                I+      ++V + A D D  +NA      YH    S  G H   F I+  +G V+
Sbjct: 1000 RATIIENRMHPERVVHVRAVDKDAVLNARDERLGYHKIIYSLQGEHAMLFEINNITGEVV 1059

Query: 111  ETTGKLIAGEQ---YSITVQATDTGGK---SSQTIVEVSV-VPGPNTRSPVFQQNTYDVN 163
                + I  E+     + V+A D+ GK   + Q++V++ + V   N  +PVF Q  Y   
Sbjct: 1060 VARDQTIDRERTPHIRLQVKAEDSPGKPTDAKQSVVDLLIDVLDVNDNAPVFTQKKYSTV 1119

Query: 164  VSEGASINSTVATI 177
            + E A I+S V  +
Sbjct: 1120 IPENAQIDSFVLQL 1133



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 22/171 (12%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-----------LTVNLNDINDNAPRLPM 55
           +N + DP   G +  + +  EKQ + +   V+           L V + D+NDN P    
Sbjct: 467 DNFNVDPETGGLYLQRQLDYEKQSSYSLTVVAIDGGGRESNANLFVGVVDVNDNHPNFEH 526

Query: 56  IPPIQ-IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--V 109
               + I+ G A  +    V+   +D     N  +TY I   ++   + FRI+P +G  V
Sbjct: 527 KEYSRTIREGAAIFEPQFFVRAHDSDGPTQGNGRVTYGIVSENSIAGNVFRIEPDTGEIV 586

Query: 110 IETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           I+   + +  E  +Y +TV ATD G    S+ T V V V    N R P+F+
Sbjct: 587 IQKAARSMDTERGEYELTVSATDFGVPPLSNTTRVLVRVGISGNQR-PIFR 636


>gi|148664778|gb|EDK97194.1| mCG140844 [Mus musculus]
          Length = 807

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 226 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 379



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   + AG A  ++V       
Sbjct: 530 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSELVSRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 636



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 404 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 460

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 461 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 493


>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
 gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
          Length = 3131

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + +++ LDR+      +   V AR++     S  VS+ + + D+NDN+P +  P    + 
Sbjct: 841  ITTRDRLDRE--TKSIYDLVVEARDQGTPYRSSRVSIKIKILDVNDNSPEIVDPQEDVVS 898

Query: 61   IQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIA 118
            ++  +    ++V++ A D D GVNA ITYSI    ++  H  F IDP +G+I T   L  
Sbjct: 899  VREEQPIGTEVVRVRAIDRDYGVNASITYSILKGRDSDGHGMFTIDPITGLIRTKASLDH 958

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V ATD G    QT+  + + V   N   P F  ++    + E   +   + 
Sbjct: 959  EEKTIYRLAVAATDNGKPPRQTVRLLRIEVLDLNDNRPTFTSSSLVFRLREDVGVGHVIG 1018

Query: 176  TIT 178
            +I+
Sbjct: 1019 SIS 1021



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 74/171 (43%), Gaps = 15/171 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+    NLD D   P +F   + A +             +NL D NDN P+ P +P    
Sbjct: 2394 LLYINNNLDYDR-GPTQFNLVIRACDSHVLPKCSVHPFVINLTDENDNEPQFP-VPEYLE 2451

Query: 62   QAGEARR---QIVKIEATDNDLGVNAEITYSI-------YHVSNTGLHKFRIDPRSGVIE 111
              GE       I    ATD D G    + YSI       Y   + G   F++D  SGVI 
Sbjct: 2452 FVGENEPIGISIFTARATDMDRGEYGRVNYSIDNAMTSGYSSVDDGWKLFKVDSVSGVIN 2511

Query: 112  TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            +       E+  YS T++ATDTGGKS    V + ++   +  SP F + TY
Sbjct: 2512 SNAVFDYEEKNRYSFTLRATDTGGKSKTVKVRI-MIESRDEFSPQFTERTY 2561



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 22/177 (12%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---EARRQIVKIE 74
            + F V+A +  +  A S  V + V + D+NDN P     P  + Q G   +  + ++ I 
Sbjct: 1634 YNFMVVATDGGRYNARSQSVQVQVIIADVNDNKPVFDKYP-FKEQIGALVQPGQTLLHIS 1692

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG 132
            ATD D G N EI YS+    N    KFRI+P +G +  T  L +  G    I V A D G
Sbjct: 1693 ATDVDQGSNGEIVYSLNDNPNNA--KFRINPNTGALSATQSLASENGRLLHIEVTARDKG 1750

Query: 133  G--KSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
               + +  ++E+ V      +P        FQ N+Y VN+ E   I  TV  +   R
Sbjct: 1751 NPPQVATGLIELRVGDLQQELPALK-----FQNNSYKVNLVENTPIGQTVLHLNAVR 1802



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 17   GKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKI 73
             ++  Q+ A+++   T+     ++TV + D NDN P+  +   I     +A     ++ +
Sbjct: 1527 ARYVLQITAQDRGSPTSHQGHCNITVRVEDENDNDPKFELQKYIATIDEDAPIGTTVLTV 1586

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            +A D D+G+NA I YS+ +V+      F ID +SGVI T G      Q  Y+  V ATD 
Sbjct: 1587 KAVDADIGINARIVYSLANVTE---WLFDIDSKSGVITTAGHFDRERQSIYNFMVVATDG 1643

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVFQQ 157
            G     SQ++    ++   N   PVF +
Sbjct: 1644 GRYNARSQSVQVQVIIADVNDNKPVFDK 1671



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQ 60
            LVV++ +LDR+  +  +   + +         S  V++ + + D+NDN P+ P  P  + 
Sbjct: 1065 LVVAR-SLDREQQSEYRMEIRALDTSASNNPQSSAVTVKIEIADVNDNPPKWPSDPMNVY 1123

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I    A   +V    ATDND G NAEI Y+I   +      F ID  +G +     L   
Sbjct: 1124 ISEDAAVGSVVFNFTATDNDSGTNAEIKYNISKPATAQKEFFSIDSLTGSLTLLAPLDYE 1183

Query: 120  E--QYSITVQATDTGGKSSQTIVEVS----VVPGPNTRSPVF---QQNTYDVNVSEGASI 170
            E  ++ + VQATD     ++ +   +    +V   N  SP F   Q     V VS+   +
Sbjct: 1184 ETKEFLLIVQATDQSSNVTERMTTSATARIMVTDVNDNSPKFVVPQAQDTTVYVSDSMEV 1243

Query: 171  NSTVATITVSRLASG 185
            N  V+ +      SG
Sbjct: 1244 NHIVSHVVAIDRDSG 1258



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAPR-LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D+ND+AP  LP    P+ +        I  + A+D D G+N EITYSI    N
Sbjct: 1444 TLVVRITDVNDHAPEFLPGSCYPLAVPENSELSVIHTVVASDADEGLNGEITYSISG-GN 1502

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSS-QTIVEVSV-VPGPNT 150
             G +KF ID  +G +  T + +  E   +Y + + A D G  +S Q    ++V V   N 
Sbjct: 1503 IG-NKFSIDMNTGAL--TARPLDREIHARYVLQITAQDRGSPTSHQGHCNITVRVEDEND 1559

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              P F+   Y   + E A I +TV T+
Sbjct: 1560 NDPKFELQKYIATIDEDAPIGTTVLTV 1586



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 23/173 (13%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSI 90
           S  +++ V + D+NDNAP         I+  E+     QI+++ A D D G NA +TY I
Sbjct: 646 STNLTILVEVQDVNDNAPVFER-SEYAIKVSESTPSNSQIMQVTAVDADTGNNARLTYRI 704

Query: 91  Y---HVSNTGLHK-----------FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
                 + TG              F I P SG I    KL   +Q  Y+ITV  +D G  
Sbjct: 705 LGDDQRTRTGKSSSKASEANTPEIFGIFPNSGWIYLRTKLDREDQERYNITVIVSDNGVP 764

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++ T V VSV+   N  +P+F +  Y+  + E     S +  IT +   +G
Sbjct: 765 TLTATTHVIVSVLDA-NDNNPIFAKQLYEFQIEENMRRGSVIGLITATDADAG 816



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 15/179 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-----IVK 72
           + F +IA ++ G + +  V   + L D+NDN P   P    + ++            +V 
Sbjct: 311 YEFPIIATDRGGLSTTAMVK--IQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVV 368

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQ--YSITVQA 128
           I ATD+D G    I+Y I   +  G+  FR+D  +G I       L +  Q  + + + A
Sbjct: 369 IVATDSDSGSFGTISYRIVAGNEAGI--FRMDRLTGEIFVARPNMLSSRSQPYHRLNISA 426

Query: 129 TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           +D GG  S    EV + V     R P+F +  Y   V E    N+ V T++ +   SG 
Sbjct: 427 SDGGGLRSTHDAEVFISVIDATQRPPIFDKPRYTYYVKEDVKKNTVVGTVSATSSNSGS 485



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 39  LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           + +++ D+NDN P        +  P  ++ G     +    A D D G++  ITY + + 
Sbjct: 544 VNIDIEDVNDNPPEFESSTVRISVPENVEIGSP---LYAANAHDKDSGMSGVITYRLSNN 600

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                + F ID RSG +     L     +++++ V A+D+G  S  T + + V V   N 
Sbjct: 601 GPATGNLFSIDSRSGHLSLARPLDYETVQRHTLIVTASDSGIPSLSTNLTILVEVQDVND 660

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATIT 178
            +PVF+++ Y + VSE    NS +  +T
Sbjct: 661 NAPVFERSEYAIKVSESTPSNSQIMQVT 688



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 12/146 (8%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAG 64
           +  LDR+  +  ++   VI  +      +    + V++ D NDN P     +   QI+  
Sbjct: 741 RTKLDRE--DQERYNITVIVSDNGVPTLTATTHVIVSVLDANDNNPIFAKQLYEFQIEEN 798

Query: 65  EARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
             R  ++  I ATD D G+NA + YS+   SNT    F+I+P SG I T  +L    +  
Sbjct: 799 MRRGSVIGLITATDADAGINAVVRYSLIP-SNT---SFQINPISGEITTRDRLDRETKSI 854

Query: 122 YSITVQATDTGG--KSSQTIVEVSVV 145
           Y + V+A D G   +SS+  +++ ++
Sbjct: 855 YDLVVEARDQGTPYRSSRVSIKIKIL 880



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
             S+ V L D NDNAPR         +  G  + + ++K+ A D D G NA I Y I  V 
Sbjct: 1871 CSIKVVLQDENDNAPRFTQQQYSASVWEGNNKGEFVIKVNAFDTDQGSNAHILYHI--VD 1928

Query: 95   NTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATDTG-GKSSQTIVEVSVVPGPNT 150
                + F I+P  SG+++T   L     ++Y + V ATD G  + + T      V   N 
Sbjct: 1929 GNHDNAFIIEPAFSGIVKTNIVLDREIRDKYKLKVIATDEGVPQMTGTATINVNVVDVND 1988

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F  N+  ++VSE  ++ + + +IT
Sbjct: 1989 NQPTFPPNSV-ISVSEATTVGTVLTSIT 2015



 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           PP+ + +         + ATD D GVNA + Y++       + +F I   +G +    +L
Sbjct: 253 PPVAVHS--------DVSATDPDCGVNAMVNYTLGE-GYKKITEFEIRSSTGEVCIAAEL 303

Query: 117 I--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                  Y   + ATD GG S+  +V++ +    + R P F    Y+V++ E    NS +
Sbjct: 304 DYETRNSYEFPIIATDRGGLSTTAMVKIQLTDVNDNR-PTFYPREYNVSLRESMPTNSLL 362

Query: 175 AT 176
           +T
Sbjct: 363 ST 364


>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
 gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
          Length = 4589

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 7/184 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2549 IFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRSTKYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   +VK+ A+D D G NA++TY+I   S +      I+  +G+I T   LI   
Sbjct: 2607 GSSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINKLTGLITTKESLIGLE 2666

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G    +++V V V +  P  + P F +  Y   +SE   I + +  I
Sbjct: 2667 NEFFTFFVRAVDNGSPPRESVVPVYVRILPPEMQLPRFSEPFYTYAISEDMPIGTEIDLI 2726

Query: 178  TVSR 181
             V  
Sbjct: 2727 RVEH 2730



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+     K  + +      GT +S    + V + D NDN+P         
Sbjct: 2977 WKVYVKKPLDRE----QKDSYLLTITATDGTFSS-KARVEVKVLDANDNSPVCEKTLYSD 3031

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + ++++ ATD D+  NAEITY+++    +G  KF+++P +G + T  
Sbjct: 3032 TIPEDALPG----KLVMQVSATDADIRSNAEITYTLF---GSGAEKFKLNPDTGELRTLA 3084

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+S Q  + V  +   N  +P F  + Y + V E
Sbjct: 3085 PLDREEQAVYNLLVKATDGGGRSCQATI-VLTLEDVNDNAPEFTADPYTITVFE 3137



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +++++ A   D+  NAEITYSI  
Sbjct: 3216 TVVVSVLDINDNPPVFEYREYGATVSEDILIG---TEVLQVYAASRDIEANAEITYSI-- 3270

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF +D ++G I     L   +  +Y +TV+ATD G  S   +  V++ V   N
Sbjct: 3271 ISGNEHGKFSMDSKTGAIFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVSDIN 3330

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   V E A++  +V TI
Sbjct: 3331 DNTPVFSQDTYTTVVGEDAALEQSVITI 3358



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G   S   ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3094 YNLLVKATDGGGRSCQATIVLTLEDVNDNAPEFTADPYTITVFENTEPGTLLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+   ++    +F I   SG+I+    L   +Q  Y++T++A D G   K
Sbjct: 3154 DAGLNRKISYSLIDSADG---QFSISEVSGIIQLEKHLDREQQAVYTLTLKAVDQGVPRK 3210

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + T   V  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3211 LTATSTVVVSVLDINDNPPVFEYREYGATVSEDILIGTEVLQV 3253



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D+ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1549 IIVNVSDMNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1607

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L    Q  Y + V+ATD G    S  T V ++V    N  S
Sbjct: 1608 G-NSFTIDPILGSIKTARELDRSNQVEYDLIVKATDQGNPPMSEMTSVHIAVTVADNA-S 1665

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y V +SE   I + V  ++    +S
Sbjct: 1666 PKFTSKEYSVEISEAVGIGTFVGMVSAHSQSS 1697



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             I+       +V+IEA D D   + ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1149 IIENSPKDVSVVQIEAFDPDSSSSDKLTYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQDEHILEVTVTDNGTPPRSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1257



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP       +    R  + ++ A D D G NAE++YSI 
Sbjct: 1234 VKILDENDNKPQFLQKFYKIRLPEREKADGERSVKREPLYRVIAADKDEGPNAELSYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1294 EGNEHG--RFSIEPKTGVVSSKKFSTAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1351

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1352 PSLEPISFEESVFTFTVMESDPVAHMIGVISV 1383



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L+D+NDN P+   IPP   ++  E   +   I+ +EA D D+G ++++ YS+  
Sbjct: 912  VLLKVSLDDVNDNPPKF--IPPNYSVKVREDLPEGTIIMWLEAYDPDVGQSSQVRYSLL- 968

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++T++A D G     SS   VEV VV  
Sbjct: 969  --DHGEGHFDVDKLSGAVRIVQQLDFEKKQVYNLTIRAKDKGKPVSLSSTCYVEVEVVDM 1026

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF        V E     S+V T++     +G
Sbjct: 1027 NENLHPPVFSSFVEKGVVKEDVPTGSSVMTVSAHDEDTG 1065



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I    A    V  ++A D D     ++ YSI  +S
Sbjct: 2375 VIVTVDVTDLNDNPPLFEQQIYEAKISEHAAHGHFVMCVKACDADSSDLDKLEYSI--LS 2432

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ V  +D   +SS   V V+V+ G N  S
Sbjct: 2433 GNDHKSFVIDSETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSAQ-VHVTVMGG-NLHS 2490

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+  ++E A +++ VA +      SG
Sbjct: 2491 PVFLQNEYEAELAENAPLHTLVAQVKAMDRDSG 2523



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ +N++DINDN P         +   +A
Sbjct: 3292 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNINVSDINDNTPVFSQDTYTTVVGEDA 3349

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
               + ++ I A D D   N+ I YSI    N G   F IDP  G ++ T  L    I+G 
Sbjct: 3350 ALEQSVITIMADDADGPSNSHIRYSIIE-GNQG-SPFTIDPIRGEVKVTKPLDRETISG- 3406

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++TVQA D G         V++ V   N  +P+F ++ Y V + E   +  +V  + V
Sbjct: 3407 -YTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVV 3465

Query: 180  S 180
            +
Sbjct: 3466 T 3466



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     AS+ VS+ V   D NDN+P L   P     ++      ++++I
Sbjct: 2775 YQFSILARCTMDDYEVVASIDVSIQVK--DANDNSPVLESNPYEAFIVENLPGGSRVIQI 2832

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+        +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2833 RASDLDSGTNGQVMYSLDQSQGADIIESFAINVETGWITTLKELDHEERASYQIKVIASD 2892

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2893 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2930



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQI------VKIEATDNDL 80
            PVSL+      V + D+N+N     + PP+    ++ G  +  +      + + A D D 
Sbjct: 1010 PVSLSSTCYVEVEVVDMNEN-----LHPPVFSSFVEKGVVKEDVPTGSSVMTVSAHDEDT 1064

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G + EI YSI   S  G+  FRID  +GVIET+ +L   +   Y +TV ATD G     +
Sbjct: 1065 GRDGEIRYSIRDGSGVGV--FRIDEVTGVIETSDRLDRESTSHYWLTVYATDQGVVPLSS 1122

Query: 139  IVEVSVV------PGPNTRSPVF 155
             +EV +         P T  PV+
Sbjct: 1123 FIEVYIEVEDVNDNAPQTSEPVY 1145



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 21/160 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q         A      +++++ATD+D  
Sbjct: 2262 TGAHAEVFVDIIVEDINDN-------PPVFVQQSYTTTLSEAAVIGTPVLQVKATDSDSE 2314

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  ++Y ++   +     F ID  +G+I     L     +Q+ + V+A D G    SS 
Sbjct: 2315 PNRGVSYQMFGNHSKSHDHFHIDSNTGLISLVRALDYEQFQQHKVFVRAVDGGMPPLSSD 2374

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             IV V V    N   P+F+Q  Y+  +SE A+    V  +
Sbjct: 2375 VIVTVDVT-DLNDNPPLFEQQIYEAKISEHAAHGHFVMCV 2413



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++A D D G+ + ITY I  V++    +F ++ R G I T  KL     A +  SI 
Sbjct: 2512 VAQVKAMDRDSGIYSHITYHI--VNDFAKDRFYVNDR-GQIFTLEKLDRETPAEKVISIR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   V V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2569 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2627



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I  + ATD D G N ++ Y+I   ++     
Sbjct: 708 HSVNAHAPQFKSALPTGIEVKENLPVGANIAFMNATDLDSGFNGKLVYAISGGNDDSC-- 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  SG+++    L     ++Y++ +   D G   +++  +++V+V+   N   P F 
Sbjct: 766 FTIDMESGMLKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDA-NDNPPEFL 824

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   +NS +
Sbjct: 825 QESYFVEVSEDKEVNSEI 842



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 8/174 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
            +LD +      F  QV         A    ++T+++ DIND  P    P+     +    
Sbjct: 1835 SLDYEETRVFHFTVQVHDMGTPRLFAECAANVTIHVIDINDCPPVFSKPLYEASLLLPTY 1894

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +I+ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1895 KGVKIITVNATDADSRPFSQLIYSITE-GNIG-EKFSMDYKTGTITIQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S T V+++V    +  SP+ F Q+ Y   V E  + + T+A IT
Sbjct: 1953 VRASD-GRFASMTSVKINV--KESKESPLKFTQDFYTAVVKENTTESKTLAVIT 2003



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            E   +I++I A D D     ++ Y++   +    L KFR+DP +G + T+ KL   A  Q
Sbjct: 1471 EPETEILQISAVDKD--EKNKLIYTLQSSIDPVSLKKFRLDPATGALYTSEKLDHEAIHQ 1528

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1529 HMLTVMVRDQDVPVKRNFARIIVNVSDMNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1586



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGV+  TG+L  +  + Y +
Sbjct: 166 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVVVLTGRLDFLETQLYEL 221

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 222 EILAVDRGMK 231



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SG I T   L       Y++TVQ T+  G S+ T V V +    N   PVF + 
Sbjct: 1711 FDINPHSGSIITQKDLDFETLSIYTLTVQGTNMAGLSANTTVTVHM-QDENDNPPVFTRA 1769

Query: 159  TYDVNVSEGASINSTVAT 176
             Y   VSE AS+NS V T
Sbjct: 1770 EYSGFVSESASVNSVVLT 1787



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 8/75 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P   +     ++  E +    +I+++EATD DLG +  +TYSI     
Sbjct: 809 LDVTVLDANDNPPEF-LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYSIL---- 863

Query: 96  TGLHKFRIDPRSGVI 110
           T   +F ID  +GV+
Sbjct: 864 TDTDRFSIDSATGVV 878


>gi|71991933|ref|NP_001021650.1| Protein HMR-1, isoform b [Caenorhabditis elegans]
 gi|75021010|sp|Q967F4.1|HMR1_CAEEL RecName: Full=Cadherin-related hmr-1; AltName: Full=Protein
            Hammerhead; Flags: Precursor
 gi|14139931|emb|CAC38842.1| HMR-1B protein [Caenorhabditis elegans]
 gi|19571647|emb|CAD27611.1| Protein HMR-1, isoform b [Caenorhabditis elegans]
          Length = 2920

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 12/152 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQ---IVKIEATDNDLGVNAEITYSI 90
            +L + + D+N+N P  P         +I  G  +     IVK+EATD+D   N +I YS+
Sbjct: 850  TLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL 909

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-V 145
            Y+  +     F ID ++GV+  +  ++   +      +TV+ATD G +      + SV V
Sbjct: 910  YYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV 969

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N  SP F++ +Y+ +VS   ++ ++V T+
Sbjct: 970  VDINDNSPQFERPSYETSVSRFEAVGTSVITV 1001



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 9    LDRDPP-NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ----- 60
            LDRDPP     + F V A +  G        + VN+ DINDN+P  P  +   I+     
Sbjct: 1501 LDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREP 1560

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN---TGLHKFRIDPRSGVIETTGKL- 116
            I +       V+    D+    NA I Y I  V N    G   FRID  +G I     L 
Sbjct: 1561 IHSDGVYFMDVQARDFDDPTTENANIEYGI--VRNKLINGESVFRIDQNTGKIFAMRSLD 1618

Query: 117  --IAGE-QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              I+ E ++ I V+A D G  S +    V++ V   N  +P F++  Y+ +V E A I +
Sbjct: 1619 REISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGA 1678

Query: 173  TVATIT 178
             V + +
Sbjct: 1679 AVMSFS 1684



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 20/130 (15%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARR 68
           DP  P   + +V ARE    +    V LT+ ++D+NDN P     P    Q  E     +
Sbjct: 604 DPALPKLHKLKVTAREDNRESH---VDLTIRIDDVNDNVPTFTR-PLYTAQVREDIPLNQ 659

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------Y 122
            I+K+ A D D G N+ ITYS+ +      H F I+  +G I    +L A +       Y
Sbjct: 660 TILKVTAVDKDTGDNSRITYSVDN------HNFSINS-NGEISAKVRLDADQLNERHFVY 712

Query: 123 SITVQATDTG 132
              V A D G
Sbjct: 713 RFNVTARDHG 722



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 38  SLTVNLNDIND-----NAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           ++ +++ DI++     N+P LPM+   P+    G    Q V   A D     ++ + Y  
Sbjct: 408 TIRIHVADIDEPPSFVNSP-LPMLAVVPLNPTIGRIVYQFV---ARDEHGDGDSNVLYKT 463

Query: 91  YHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYSITVQATDTGGKSSQT--IVEVSVVP- 146
             V   G   F +DP+SGV+ T   K   G+ Y I+ QA D     + T  + EV+++  
Sbjct: 464 IDVIPAG--SFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEI 521

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             + R P F +  Y+V VSE   ++ +V  +      S
Sbjct: 522 LADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRS 559


>gi|21410266|gb|AAH31051.1| Cadherin 18, type 2 [Homo sapiens]
 gi|61363884|gb|AAX42459.1| cadherin 18 type 2 [synthetic construct]
 gi|123993751|gb|ABM84477.1| cadherin 18, type 2 [synthetic construct]
 gi|123994521|gb|ABM84862.1| cadherin 18, type 2 [synthetic construct]
          Length = 790

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 AG---EQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G   E YS+ +QA D     GG S  T V +++    N  +P F Q  Y + V E A +
Sbjct: 225 DGEAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNTPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)

Query: 25  AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATD 77
           A++  G    +  S TVN  L D+NDN PR P     +  P   Q G A   + KI+A D
Sbjct: 238 AKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQLYVPESAQVGSA---VGKIKAND 294

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL-----------IAGEQYSI 124
            D G NA++TYSI +    G+     D   R G++     L           I G    +
Sbjct: 295 ADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSYTLNIEGANTHL 354

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + +  G     T++++ V  G     P+F   +Y + V E A I + V T+
Sbjct: 355 DFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEVYENAKIGTVVGTV 405


>gi|60654415|gb|AAX29898.1| cadherin 18 type 2 [synthetic construct]
          Length = 791

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 AG---EQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G   E YS+ +QA D     GG S  T V +++    N  +P F Q  Y + V E A +
Sbjct: 225 DGEAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNTPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)

Query: 25  AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATD 77
           A++  G    +  S TVN  L D+NDN PR P     +  P   Q G A   + KI+A D
Sbjct: 238 AKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQLYVPESAQVGSA---VGKIKAND 294

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL-----------IAGEQYSI 124
            D G NA++TYSI +    G+     D   R G++     L           I G    +
Sbjct: 295 ADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSYTLNIEGANTHL 354

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + +  G     T++++ V  G     P+F   +Y + V E A I + V T+
Sbjct: 355 DFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEVYENAKIGTVVGTV 405


>gi|339258504|ref|XP_003369438.1| putative cadherin domain protein [Trichinella spiralis]
 gi|316966323|gb|EFV50917.1| putative cadherin domain protein [Trichinella spiralis]
          Length = 2240

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 18/193 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ +KE+LDR+     +    VIA      +     ++ V + D+NDN P +      PI
Sbjct: 1057 IITTKESLDRE--EFPELVVAVIAENINEPSRFDISTVYVEVEDVNDNRPIINKDSCHPI 1114

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             I        +V I ATD D  +NA I YSI  V      KF I+P+SG++  + K +  
Sbjct: 1115 VIPENVHMNNLVTIYATDRDSDLNARIVYSI--VGGNDGEKFNINPQSGLV--SCKALDR 1170

Query: 120  E---QYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            E   QY++T+ ATD+G      S   IV VS     N   P FQ + Y ++V E A   +
Sbjct: 1171 ESRSQYNLTILATDSGVSRLADSCNLIVTVS---DENDNVPKFQSDVYSIDVVEDARPGT 1227

Query: 173  TVATITVSRLASG 185
            TV  +T      G
Sbjct: 1228 TVLKLTADDFDEG 1240



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 6/149 (4%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           ++     G   S    + V++ D+NDN P   P++  + + Q+      ++ + ATD D 
Sbjct: 4   IVVSAFDGGGLSSSAVIRVSVEDVNDNYPTFYPLVYNVSLRQSVLPGTPVLVVSATDLDS 63

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIV 140
           G+  E+ Y I    N G   FRI+P SG +    KL     Y + ++A D G  +S  + 
Sbjct: 64  GLFGEVNY-IISSGNDG-ESFRIEPHSGELYVNAKLFP-TVYQLKIKAVDGGNFASPQMA 120

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            V+V V   N  SP F++  Y   V E A
Sbjct: 121 TVTVTVLTENFPSPYFEEKFYRFTVREDA 149



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 15/188 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARR---QIVKI 73
           +  Q+IA +    + S    + V++ D+NDNAP   ++P  Q  I   E +    +++++
Sbjct: 521 YELQIIAYDGGIPSLSTTCKVIVHVKDVNDNAPFF-ILPTRQDNILFREEQSSGTEVIQV 579

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQAT 129
           +A D D G N  + Y +   S+T    FRI+ R+G+I +T +++  E+    Y +TV A 
Sbjct: 580 QARDPDSGRNGTVRYRLDAESSTPPMPFRINRRTGIIYST-EVLDYEKGPTIYKVTVIAE 638

Query: 130 DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
           D G    SS+  + + +V   +  S      T    +SE   + + + ++   R+  G  
Sbjct: 639 DWGKPILSSKKCITIELVDIEDGSSYADDNETSTFELSESVPVGTNIGSVDSERI--GYL 696

Query: 188 IMNKEENS 195
             +K+ NS
Sbjct: 697 KNSKDNNS 704



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 13/151 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+V K  LDR+  +  K+ F       +    +   ++ + + D+NDNAP     P   I
Sbjct: 1735 LIVMKP-LDREKVD--KYHFVATIESHEFGVENSTTNVIIYVEDVNDNAPVFSH-PEYHI 1790

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               E+      I+K+ A+D D+GVN+ + + I   S      F I+  +GVI+   KL  
Sbjct: 1791 SVNESMPVGSVIMKLSASDEDIGVNSLLHFEI--TSGNTESTFAIENSTGVIKLQKKLDN 1848

Query: 119  GE--QYSITVQATDTG--GKSSQTIVEVSVV 145
             +   Y + ++ TD+G   +SS  +  V V+
Sbjct: 1849 TKINHYKLILKVTDSGVPARSSLAMCYVLVM 1879



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 6/142 (4%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            L + + D+NDN P  P   P+ ++        +    T ND+     +TY      N G 
Sbjct: 1497 LEITVLDVNDNTPSFPPTKPVFVKEDIPVGSFIA-SVTANDVDSFPALTYHFTEKGNPG- 1554

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              F+ID  SG I    +L   +Q  +++ +QA D  G     + ++  +   N  +P F 
Sbjct: 1555 EFFKIDKFSGQIMLAKRLDYEKQSIHTLEIQAYD--GIHYAFVKQIIQLIDINDNAPTFS 1612

Query: 157  QNTYDVNVSEGASINSTVATIT 178
               + + +S G+   ST+  IT
Sbjct: 1613 HAVHQIFLSLGSVQGSTIGRIT 1634



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 10/152 (6%)

Query: 41  VNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDNAP        I + +  E    +   +ATD D G+N +I Y +   S    
Sbjct: 223 VIVEDINDNAPLFDQSYAEISVMEDHEVGIALYTAKATDRDSGLNGQIRYRL---SVNPE 279

Query: 99  HKFRIDPRSGVIETT-GKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
           + F I P SG I     +    E+   Y++ + A D G  S  T + + + V   N  SP
Sbjct: 280 NTFMIHPVSGEIRLNHNRAFDYEKRKNYTLVITAQDGGIPSFTTEMTLLIFVLDANDHSP 339

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y   V E A + + +  +    L  G
Sbjct: 340 EFLQKIYRSAVYENAPLMTKIFQLKAIDLDHG 371



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 41   VNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + L DINDNAP     +  I +  G  +   I +I A D D G N  ITY +  +++   
Sbjct: 1599 IQLIDINDNAPTFSHAVHQIFLSLGSVQGSTIGRITAVDEDGGENGRITYKLLKINDLNF 1658

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV 154
             + +  P      TT ++       + + V+A+D G   +SS+  V V +   P   +  
Sbjct: 1659 ARLKSTPL-----TTPEIWIDSNTVFKLIVEASDNGKPQRSSRLPVVVQIHFSPVQEAAR 1713

Query: 155  FQQNTYDVN 163
            F    Y +N
Sbjct: 1714 FALPVYSIN 1722


>gi|301621404|ref|XP_002940045.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Xenopus
            (Silurana) tropicalis]
          Length = 5753

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 5/151 (3%)

Query: 39   LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + +N++D NDN P     +     I+       +V + ATD D GVN +ITYS+ H++  
Sbjct: 2635 IKINISDFNDNTPLFSKELYQVNLIETAPVNTLVVHLNATDEDEGVNGQITYSLSHITKA 2694

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
               KF ID ++G I T G L   + + + + V+A D GG  S   V + +V   N  +P 
Sbjct: 2695 AQEKFTIDSQTGEIRTKGTLDFESIKAFEMIVEAQDGGGLFSNAKVVIHIVDA-NDNAPE 2753

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
                +   ++ E +S  + +A I +  + SG
Sbjct: 2754 IIITSVSNSIPEDSSPGTVIALINIRDIDSG 2784



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
            K GTA      + +++ D+NDN P     + P+ + +       ++ + ATD D GVN  
Sbjct: 3421 KTGTAI-----IKISITDVNDNTPMFSKEVYPVNLPENAPVDTLVICLNATDADEGVNGH 3475

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVS 143
            I YS  H+S      F ID  +G I T G L     + Y + V+A D GG  S T V + 
Sbjct: 3476 ILYSFSHISKIAQQTFTIDSHTGEIRTKGTLDFEITKAYEMIVEAQDGGGLFSHTKVVIQ 3535

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V+   N  +P     +   ++ E +   + VA I +  + SG
Sbjct: 3536 VL-DTNDNAPEIILTSVSNSIPEDSLPGTVVALIDIQDMDSG 3576



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 7/148 (4%)

Query: 43   LNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            ++DINDN+P        Q+   E+      ++++ ATD D GVN  ITY +  +S     
Sbjct: 1834 ISDINDNSPLFSQ-ELYQVSLTESAPVNTLVIQMNATDADEGVNGHITYYLSRISKAAQQ 1892

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            KF ID  +G I T G L     + Y + V+A D GG  S   V + +V   N  +P    
Sbjct: 1893 KFTIDTETGEIRTKGTLDFETTKAYEMIVEAQDGGGLFSNAKVVIQIVDA-NDNAPEIIL 1951

Query: 158  NTYDVNVSEGASINSTVATITVSRLASG 185
             +   ++ E +   + +A I +  + SG
Sbjct: 1952 TSVSNSIPENSVPGTVIALINIRDIDSG 1979



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 45   DINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D+NDN P     +  + +  G      ++ + ATD D GVN  +TYS  H+S      F 
Sbjct: 4252 DVNDNVPMFSKELYQVSLTEGVPVNTLVIDMNATDEDEGVNGHVTYSFSHISKIAEQTFS 4311

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            ID ++G I T  +L     + Y + V+A D GG  S   V + +V   N  +P     + 
Sbjct: 4312 IDSQTGEIRTREELDFEVTKAYVMNVEAADGGGLVSHAKVIIQIVDA-NDNAPEITLTSV 4370

Query: 161  DVNVSEGASINSTVATITVSRLASG 185
              ++ E +   + VA I +  + SG
Sbjct: 4371 SNSIPENSVPGTVVALINIRDVDSG 4395



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 45  DINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D NDN P     +  + I         ++ + ++D D G+NA+ITYS    +   L  F 
Sbjct: 201 DFNDNVPVFTQEVYKVNIHENIPINSTVLHVNSSDKDEGINAQITYSFSTAATNVLRMFT 260

Query: 103 IDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           I+P +G I+T G +   E   Y I++QA D GG  +   V + ++   N   P     + 
Sbjct: 261 INPNNGEIKTKGNVDFEETKYYDISIQAEDGGGLVAHAKVLIEII-DENDNVPEISITSI 319

Query: 161 DVNVSEGASINSTVATITVSRLASG 185
              +SE ++  + VA I    L SG
Sbjct: 320 TTPISEDSASGTLVALIEAHDLDSG 344



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 45  DINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D NDN P     +  + I+        ++ + A+D D G+NA+ITYS    +   L  F 
Sbjct: 665 DFNDNFPVFTQEVYKVNIRENIPINSLVLYVNASDKDEGINAQITYSFGTAATNVLRIFT 724

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN 158
           I+P +G I+T G +   E+  Y I+VQA D G    +++ ++E++     N  +P     
Sbjct: 725 INPNNGEIKTIGNVDFEEEKYYDISVQAEDHGSLVANAKVLIEIT---DENDNAPEISVT 781

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
           +    +SE ++  + VA I    L SG
Sbjct: 782 SITTPISEDSAPGTVVALIKAHDLDSG 808



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 21/149 (14%)

Query: 41  VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           + + D NDNAP +    +  PI   +      +  I+A D D G N E+   I      G
Sbjct: 766 IEITDENDNAPEISVTSITTPISEDSAPGTV-VALIKAHDLDSGENGEVDCEI-----IG 819

Query: 98  LHKFRIDPRSG---VIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
           +  F++   +G    I TT  L       Y+IT+QATD G    S +  + + V+   N 
Sbjct: 820 VGPFKLLSSTGNFYKIVTTSALDRERSSHYNITIQATDKGSPPLSFRKTIRLDVL-DIND 878

Query: 151 RSPVFQQNTYDVNVSE----GASINSTVA 175
             PVFQ +TY   VSE    GASI S  A
Sbjct: 879 NPPVFQTSTYIAYVSENNQPGASIYSIQA 907



 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 20/115 (17%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----------PMIPPIQIQAGEARR 68
             F V A +      S  +++ + + D NDN P +           P I P  + AG    
Sbjct: 5345 EFTVTAEDFGSPKLSSNITIHLYILDENDNYPTILFPQASQHLQSPQIIPKALPAGSL-- 5402

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
             + K+ A D D G NA +TY++  VS+  L+K  I P +G I    KL+   QY+
Sbjct: 5403 -VTKVVAVDADSGYNAWLTYNLTEVSSLDLYK--IIPHTGEI----KLVRNIQYT 5450



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 29/149 (19%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + +++  NLDR+  +  ++   + A ++   + S   ++ + L D+NDN       PP+ 
Sbjct: 2004 FRLLTTRNLDREEMH--EYNITIKATDRGSPSLSTTKTIKLVLLDVNDN-------PPVF 2054

Query: 61   IQAGE---------ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
             QA           +   + +++A+D DL  NA+ITYSI    NT    F +     +  
Sbjct: 2055 GQASYVVYIPENNPSGSSVFQVQASDPDLDDNAKITYSIM---NTNTDNFPVSSYISINS 2111

Query: 112  TTGKLIAG--------EQYSITVQATDTG 132
             TG L A          ++ I V A D G
Sbjct: 2112 MTGILYAQRPFDYEQLREFGIQVMAKDNG 2140



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 17/154 (11%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------ 71
            +F  QV+A++      +   ++T+ + D+NDN+P++  + P       A+ +IV      
Sbjct: 2129 EFGIQVMAKDNGSPPLNSTTTVTICITDLNDNSPKI--LYPSTSADDSAQFEIVPRTSNK 2186

Query: 72   -----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
                 K+ A D D G NA ++Y    VS +    F I   +G I T       E  +  +
Sbjct: 2187 GELVAKVVAVDADSGHNAWLSYEFLQVSES--MSFTISRHTGEIRTLRVFPEKETLKQRL 2244

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
             V   D G       + +++V   N +  + Q N
Sbjct: 2245 VVLVKDNGSPPRSATINLNLVVADNFQQDIPQMN 2278



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 19/158 (12%)

Query: 41  VNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           V++ D+NDN PR         I        + I++  A D D+G+N+ +TY +    +  
Sbjct: 552 VDIKDLNDNLPRFIRETNEFEISEHTSPGAKYILQ-NAEDLDVGMNSIVTYKL----SAN 606

Query: 98  LHKFRIDPRSGVIETTGKLI--------AGEQYSITVQATDTGG--KSSQTIVEVSVVPG 147
            H    + +S    T  +LI            + + + A+D G   ++  T++++ +V  
Sbjct: 607 KHFVLGEKKSTNGRTFPELILQTGLDRETQSNHELILTASDGGNPVQTGTTLIKI-IVTD 665

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   PVF Q  Y VN+ E   INS V  +  S    G
Sbjct: 666 FNDNFPVFTQEVYKVNIRENIPINSLVLYVNASDKDEG 703



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            ++++ A D+D G N EI+Y     +S    + F +D ++G I   GK+    Q  Y I+V
Sbjct: 5075 VIQLHADDSDEGPNGEISYYYEDQISENIANVFSLDQQTGEICVQGKVDYEYQRSYEISV 5134

Query: 127  QATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             A D G        IV+V  +   N  +P    +++  ++ E   I +TV   +V    S
Sbjct: 5135 IARDHGVPEMEGHCIVQVD-IEDLNDNAPAITLSSFVSSIPEDTPIGTTVLLFSVKDQDS 5193

Query: 185  G 185
            G
Sbjct: 5194 G 5194



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 14/163 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V+   LDR+      +   + A +K     S   ++ +++ DINDN P       I 
Sbjct: 833 YKIVTTSALDRE--RSSHYNITIQATDKGSPPLSFRKTIRLDVLDINDNPPVFQTSTYIA 890

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTG 114
              +  +    I  I+A D D   N ++ YSI   SNT          I+P +GVI    
Sbjct: 891 YVSENNQPGASIYSIQAIDKDTEENGKLFYSII-TSNTEEISSTSYISINPVTGVIYAQR 949

Query: 115 KLIAGE--QYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSP 153
                E  ++ I + A D G  S  S  IV + VV   N  SP
Sbjct: 950 SFDYEEDREFEIQIMAKDNGSPSMNSSAIVRICVV-DQNDNSP 991


>gi|156379093|ref|XP_001631293.1| predicted protein [Nematostella vectensis]
 gi|156218331|gb|EDO39230.1| predicted protein [Nematostella vectensis]
          Length = 4354

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 17/183 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAG 64
            + LDR+  +P K  F VIA + + TA +    + VNL D+NDNAPR P  P I    +  
Sbjct: 2843 KQLDREE-SPVKV-FTVIANDGKHTAQA---EIRVNLTDVNDNAPRFPASPYIGYVEENK 2897

Query: 65   EARRQIVKIEATDND---LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE- 120
             +   ++ I+A D+D    G NA+++Y +   +++   KF IDP SG+I+T       + 
Sbjct: 2898 PSGTSVMYIQAVDDDDPLAGGNAKLSYEL---TDSAGDKFSIDPLSGLIKTKVTFDREQT 2954

Query: 121  --QYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              ++ + V+ATD G  + S ++  +  V   N   P F +  Y  +V+E A    +V  +
Sbjct: 2955 PNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKFYRGSVAENAPPGYSVLRV 3014

Query: 178  TVS 180
            T +
Sbjct: 3015 TAT 3017



 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)

Query: 14   PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-QIVK 72
            PN  ++  QV+A++  G  ++V  S+T N+ D N+N P+      + I+  + R  +I +
Sbjct: 2211 PNKNQYTLQVMAKDSGGLTSTV--SVTFNVADANNNVPQFTNCGTVSIRENDPRDTKITQ 2268

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATD 130
            + ATD D G N +ITYSI   S+  L  F I+PR+GV+ +   L     + Y+  ++A D
Sbjct: 2269 LTATDADRGQNGQITYSIEDASSQTL--FSIEPRTGVVRSLTSLDRENKDSYNAIIKAED 2326

Query: 131  TGGKSSQT 138
               K  ++
Sbjct: 2327 GSSKQDES 2334



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ +K   DR+   P KF+ +V A +      S  V   ++++D ND+ P+       + 
Sbjct: 2942 LIKTKVTFDREQ-TPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTE----KF 2996

Query: 62   QAGEARR------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              G           ++++ ATD D+G NAE  + +  V     H F IDP +G +  +G 
Sbjct: 2997 YRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVV--VQGNDPHAFYIDPFNGTVLVSGI 3054

Query: 116  LI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            L     ++Y+IT+   D G    +  +T   V  +   N  +P F    Y+ +V E    
Sbjct: 3055 LDYEKKKEYTITLTVADRGMPPLQGDETAYVVIEILDANDNAPEFIPKIYNASVLEDVGA 3114

Query: 171  NSTVATITVSRLASG 185
               V T+T     SG
Sbjct: 3115 RQPVLTVTAVDKDSG 3129



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 78/173 (45%), Gaps = 17/173 (9%)

Query: 18   KFRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARR-QI 70
            K  F +  R K    A   +  V   V + D+NDN PR         + I +  A+  Q+
Sbjct: 1073 KSYFPIAVRAKYSGGAIELASEVVAKVTIVDVNDNGPRFAFHESSKTVVIDSFSAKDTQL 1132

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
             +  A D D G   E+TY I    +T    F I+ ++G+I  T +++   G  Y I V A
Sbjct: 1133 AR--ALDADSGSLGEVTYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVA 1190

Query: 129  TDTGGKSSQTI----VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            TD     SQ I    V V V+  P  R P F Q TY   V+E A +  TV T+
Sbjct: 1191 TDGATDGSQKIQKFTVNVQVLDTP--RPPSFPQKTYSAPVTETAGVGDTVTTV 1241



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 15/179 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVK 72
            K+ F V A ++          + VN+ D+ND+ P        +  P    AG +   +V 
Sbjct: 866  KYTFNVRATDRNFRNMFATAQVEVNVIDVNDHKPEFLQESYWLSVPSSTPAGSS---LVT 922

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            ++A D D+G NA++ Y +    N+   +F ++  +  + T   L    +Y + ++A+D+ 
Sbjct: 923  VQAEDMDIGTNAQVRYELLRQENS--ERFILNDNNQ-LSTASTLTPNVRYQLLIRASDSA 979

Query: 133  GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
             +   S+Q  V VSV   P+    VF +++Y+ N+ E +S N+ V T   +R  S   I
Sbjct: 980  TRNPSSAQVPVYVSVY-SPSESPIVFDKSSYNQNLPEDSSANTLVFTAKATRSGSSSGI 1037



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 7/185 (3%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            ++ +K  LDR+   P K+  +V A++     +++   L + + D ND  P   P    I 
Sbjct: 2626 MITTKTTLDREV-TP-KYDVEVTAKDGVNKESAI---LYITVVDQNDQPPVFAPKSYAIS 2680

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            + +       ++ I ATD D+G NA+ITY I      G       P  G +   GKL   
Sbjct: 2681 VPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGKFSIVTSPVKGELVVNGKLDFE 2740

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             + S T++ T T GK S T V    +   N   PVF    Y+  + E     + V  +T 
Sbjct: 2741 TKSSYTLEVTATDGKFSDTAVVTVTIQDVNDLPPVFSSPLYESRIQENTGPGAGVVMVTA 2800

Query: 180  SRLAS 184
            S + S
Sbjct: 2801 SDIDS 2805



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV--KIEATDNDLGVNAEITYSIYHVS 94
            ++ VNL DIND+AP     I    I+ G A    +   + A D+D G N +I YSI    
Sbjct: 1303 TVYVNLTDINDDAPHFTSAIYRRSIKEGLAEDTEILPPVIAVDHDFGSNGKILYSIL--- 1359

Query: 95   NTGLH-----KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG-KSSQTIVEVSV-V 145
             +G+H      F ID  +G I T   L     + +++ ++A D G  K    I +V + V
Sbjct: 1360 -SGVHPDWDKYFNIDSATGKITTKMTLDYETHKSHTLFIRAEDNGSPKRLSGIAQVDIDV 1418

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               N  SPVF    Y   +S GA   ++V  +  + L SG
Sbjct: 1419 IDRNDNSPVFAAAFYRAKISLGAVKGTSVLQVHATDLDSG 1458



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 19/156 (12%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LT+N+ D+NDN P             +      I+ ++ATD D G NA+I Y++   S  
Sbjct: 2343 LTINVEDVNDNRPYFLAAKYFGSVFSSAPNGSNILTVQATDADSGSNAKIKYALLD-SAG 2401

Query: 97   GLHKFRIDPRSGVIETTG-----KLIAGEQYSITVQATDTG-------GKSSQTIVEVSV 144
            GL  FR+D  SG++ T       +L  G++  + V A D         GK ++   ++ +
Sbjct: 2402 GL--FRLD-SSGILRTNTNPARLQLETGKKLLLEVSAKDVESIAGTQPGKPTKYTTQIEI 2458

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   N   P F Q  Y  +++E     STV  IT +
Sbjct: 2459 LVS-NEEPPKFSQQVYTASINENMETGSTVTRITAT 2493



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 14/121 (11%)

Query: 70  IVKIEATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-----GEQYS 123
           ++ + A DND +G N  + YS+   S  G+ KF IDP SGV+  T  +          Y 
Sbjct: 387 LLVMRAADNDPIGPNKRLRYSL---SGNGVSKFAIDPESGVVTLTDSVDYENTPNNHVYD 443

Query: 124 ITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +TV ATD G      ++Q ++E+  V   N  SP F      + +SE    NS V T++ 
Sbjct: 444 LTVTATDQGPGSLSATTQLLIEIQDV-DENKNSPRFDPQQAILEISENLKQNSLVTTVSA 502

Query: 180 S 180
           +
Sbjct: 503 T 503



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 12/181 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEA 75
            ++  +V A E+        V + +++ + ND+ P     +  +QI    A   +V+ + A
Sbjct: 2005 QYNLKVKATEQIPDGLDSTVDVKIDVINANDHFPYFDQQLYSVQIPESTAVGVLVQEVTA 2064

Query: 76   TDNDLGVNAE-----ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
             D D   +       +TYSI      G  KF IDP +G I  +  L   +Q  + + V A
Sbjct: 2065 KDCDCLSSCTCSPGFLTYSIEPSKEQG-GKFYIDPATGKISVSVALDYEDQRYHLLKVYA 2123

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
            TD G KS Q +  V+V +   N   P F ++ Y+  V+EGA+   ++A I V+  A G A
Sbjct: 2124 TDKGKKSFQGLCFVNVTLTNVNDNRPTFLKSAYEFRVAEGAATGESLA-IVVAVDADGDA 2182

Query: 188  I 188
            +
Sbjct: 2183 V 2183



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDI--NDNAPRL-PMIPPIQIQAGEARRQI 70
           PN   +   V A ++   + S    L + + D+  N N+PR  P    ++I     +  +
Sbjct: 437 PNNHVYDLTVTATDQGPGSLSATTQLLIEIQDVDENKNSPRFDPQQAILEISENLKQNSL 496

Query: 71  VK-IEATDNDLGVN-----AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---Q 121
           V  + ATD+D   N      ++ YSI  V  TGL  FR+D  +G ++     +  E   Q
Sbjct: 497 VTTVSATDSDSVGNPSSPDGKVVYSI--VGGTGLGVFRVDSNTGEVKVAVPSLDREGTSQ 554

Query: 122 YSITVQATD--TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           Y++ V+A+D  T  +SS+  + ++++   +   P F Q  Y   V E    + T  T+ V
Sbjct: 555 YTLVVKASDNATFPRSSRLFLMINLL-DEDDNFPYFSQPIYIAQVPENQP-SGTFVTVVV 612

Query: 180 SRLA 183
            R A
Sbjct: 613 GRDA 616



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 15/145 (10%)

Query: 41   VNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +++ D NDN+P         +I  G  +   ++++ ATD D G N +ITYSI  +     
Sbjct: 1416 IDVIDRNDNSPVFAAAFYRAKISLGAVKGTSVLQVHATDLDSGQNGQITYSI--IQGNEE 1473

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGG--KSSQTIVEVSVV--PGPNTRS 152
              F I+   GVI     L  +A +++S+ V+A D     +S    VE++V    GP    
Sbjct: 1474 EAFTIN-EQGVILVDKSLTTVAADKFSLKVEARDKNASPRSGSVTVEINVYLPDGP---- 1528

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P+F  +   V V EG   N  VA +
Sbjct: 1529 PMFVVSPVTVYVKEGVPANHRVAGV 1553



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 15/166 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIE 74
            +  Q  A++K+    S  V + +N+ D+ND +P   +    +    ++   A  +++ ++
Sbjct: 2537 YNMQFAAKDKKTLLYST-VKVVINIIDVNDVSPAFLLAINTRNARVLENKPAPTKVISMK 2595

Query: 75   ATDNDLGV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            A D+D    +  +TY +    N     F+ID  +G+I T   L      +Y + V A D 
Sbjct: 2596 AIDDDGSEPHRRVTYEMKDNPN-----FQIDASTGMITTKTTLDREVTPKYDVEVTAKDG 2650

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              K S  I+ ++VV   N + PVF   +Y ++V E + I ++V  I
Sbjct: 2651 VNKES-AILYITVV-DQNDQPPVFAPKSYAISVPEDSPIGTSVLDI 2694



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 15/150 (10%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + + + D NDNAP    IP I     ++   AR+ ++ + A D D G N   T++I   S
Sbjct: 3085 VVIEILDANDNAPEF--IPKIYNASVLEDVGARQPVLTVTAVDKDSGPNGNFTFAIDPRS 3142

Query: 95   NTGLHKFRIDPRS-----GVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPG 147
            +     F I+P       G+I T   L   +   + + V ATD GG   +  V ++V+  
Sbjct: 3143 DPD-DAFTIEPNPNNASIGIIRTRVPLDQEKTPSFHLKVTATDAGGLQGEGEVRINVI-D 3200

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P F    +   + EG S    V  +
Sbjct: 3201 VNDNGPWFVPPFFVGQIKEGVSARQFVTKL 3230



 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 12/136 (8%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG--------LHKFRIDPRSGVIETTGKLI 117
            A  Q+ ++EA D D G +  + Y +   SN           H F I+P++  +E  G L 
Sbjct: 1840 AGAQVYQLEARDEDDGSSGLVGYQLKSPSNDAKRKRRSPPQHPFTINPKTRQMEVAGSL- 1898

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              ++Y + V A D G    +S TI             P F + +Y   VSE A   S V 
Sbjct: 1899 KDQRYDLDVFAFDYGIPRLTSDTITLNVDGSAAGQLPPRFSKVSYHFMVSEDAKYLSLVG 1958

Query: 176  TITVSRLASGCAIMNK 191
             I ++R  SG  +  K
Sbjct: 1959 -IILARSISGARLDYK 1973


>gi|431896448|gb|ELK05860.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Pteropus alecto]
          Length = 2652

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 562 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 613

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   N G   F ++  SG++ T  +L    +A  QY +
Sbjct: 614 SVLQISATDRDSGLNGRVFYT-FQGGNDGDGDFIVESTSGIVRTLRRLDRENVA--QYIL 670

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 671 RAYAVDKGMPPARTPIEVTVTVLDVNDNPPVFKQDEFDVFVEENSPIGLAVARVTAT 727



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V  ++      S   +LT+ + D ND+ P        Q +
Sbjct: 22  VTTAEELDRETKSTHVFR--VTVQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 74

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T G
Sbjct: 75  YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEAFEIDPRSGVIRTRG 134

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 135 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 194

Query: 170 INSTVATITVS 180
             + +  +T S
Sbjct: 195 PGAPILRVTAS 205



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 342 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYT 397

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 398 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 448

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 449 SLALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDA---NTHRPVFQSSHYTVNVNED 505

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 506 RPAGTTVVLISAT 518



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 512 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 567

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 568 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 626



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       I+++ A+D D G NA + YSI
Sbjct: 161 SATAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPILRVTASDRDKGSNALVHYSI 219

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 220 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 276

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 277 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 308



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 653 IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPIEVTVTVLDVNDNPPVFKQDEFDVF 710

Query: 57  ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 711 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 761

Query: 113 TGKLIAGE--QYSITVQAT 129
              L   +  +Y + +QAT
Sbjct: 762 LVDLDYEDRPEYILVIQAT 780


>gi|405953973|gb|EKC21529.1| Protocadherin Fat 4 [Crassostrea gigas]
          Length = 4768

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 24/177 (13%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVK 72
            ++I     GT  +V  ++ VN+ DINDNAP          +P   PI          I  
Sbjct: 1632 RLIIESSDGTNTAV-ATVKVNITDINDNAPVFTNVFYSFDVPEDTPIGTT-------IAL 1683

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQAT 129
            +EA D D G+N E+ Y++  VS  G   F +DP+ G I    K +  EQ   +S+T+ A+
Sbjct: 1684 VEAVDADQGLNGEVVYTL--VSTWGQSIFHLDPQMGTIRLI-KNVDYEQNHLFSLTILAS 1740

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  S  T V V + V   N   P F   +Y   V E A++ + V T+  + + SG
Sbjct: 1741 DKGSPSQSTSVLVYLNVKDVNDNEPQFNHQSYAGQVLENAAVGTVVLTVQATDIDSG 1797



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 24/189 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------- 54
            ++ S++ LDR+  +   +   V+A++    A S   ++TV ++D+NDN P+         
Sbjct: 2246 ILTSQKLLDRE--DTALYHLTVVAKDHGNLAKSAEANITVYVDDVNDNVPQFEKQTYNKT 2303

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  P  +      + +V + A D D+G N  +T   Y +      KF +D + G+I    
Sbjct: 2304 LNNPTSLG-----QFVVGVTAVDRDVGPNGRVT---YRLQGGDCSKFNLDSQRGIITAAT 2355

Query: 115  KLI-AGEQYSITVQATDTGGKSSQT----IVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             +  AG ++  T++A D G +   +    +VE+S V GP++  PVF      V+++EG S
Sbjct: 2356 FMSGAGSRFQCTIEARDQGSQEKMSTTTLVVEISSV-GPSS-IPVFDTVNSPVSLNEGVS 2413

Query: 170  INSTVATIT 178
            +   V T+T
Sbjct: 2414 LEHVVTTVT 2422



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 20/189 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           V++ + LDR+     ++  +VIAR++     S   ++ + ++D NDN   +P+  P +  
Sbjct: 640 VITLKQLDRE--TLSQYVLKVIARDQSVLPLSSTATIYLTVDDENDN---VPVFYPQKYY 694

Query: 61  ---IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL- 116
              +++  +  ++VK+ A D DLG    I YS  +       +F +D  +G I TT +  
Sbjct: 695 TNVLKSATSGTKVVKVNAVDPDLGDGGRIYYSFPN----DYPQFVLDTNTGWISTTYEFE 750

Query: 117 -IAGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             + ++YS+ V   DT      +   +V+++VV   N+  PVF +++Y   V E  + N 
Sbjct: 751 RSSQQEYSLQVTCRDTNTVHRAAVNAVVKITVVTSLNSL-PVFTKSSYQFTVMENLAGNQ 809

Query: 173 TVATITVSR 181
            + ++ VSR
Sbjct: 810 FLGSVAVSR 818



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 22/191 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQ 62
            LD D P    +   V AR+         V LTV L D+NDN P          +P    +
Sbjct: 2994 LDYDSPT-NIYLLNVSARDSALHYKEATVILTVQLTDVNDNPPLFTQSHFEGFVP----E 3048

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-----LHKFRIDPRSGVIETTGKLI 117
               +   I+K++A D D G NA I    Y++S +G     L  F+I+  +G + T G L 
Sbjct: 3049 NSPSDTSIIKVQARDIDTGDNARIE---YYISESGSDQLALTLFKINKDTGTLMTKGILD 3105

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               Q  YS+ V A +    + +  V+V+V V   N   P F Q TY  +  E A+  S +
Sbjct: 3106 YENQIKYSMVVIARNPNNVNMRNTVKVTVHVTSVNEYYPEFVQKTYAFSTKESAANGSVI 3165

Query: 175  ATITVSRLASG 185
              ++ +    G
Sbjct: 3166 GKVSATDRDKG 3176



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 18/186 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + +K  +DR+     +    VI+R   G  + +P+ + + + DINDN+P  P   P+Q  
Sbjct: 86  ISTKTEIDRELLKSDRLNILVISRPP-GNTSQIPIDIYITVLDINDNSPTFPE-SPVQRD 143

Query: 63  AGEARRQIVKIE---ATDNDLGVNAEIT-YSIYHVSNTGLHKFR--IDPRSG----VIET 112
             E      KI    ATDND+G N  +T Y I   ++ G  KFR   DP        +E 
Sbjct: 144 ISEKANIGYKIRLDTATDNDIGKNGNVTNYQIIKRNDDG-RKFRTVFDPSKFGQVLYLEL 202

Query: 113 TGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
              L   E+  Y +T++A D G    + + +V++  V   N   P+F  + Y   V+E +
Sbjct: 203 IDILDREEKDSYELTIRAADQGEYPLTGELVVQIQ-VSDANDNPPIFSLSQYTSTVNESS 261

Query: 169 SINSTV 174
            +++ V
Sbjct: 262 PVDTLV 267



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D NDN P     I    ++   A+   V K+ ATD D+  NA +TY I  +       F 
Sbjct: 1197 DQNDNPPHFDRDIYRTSVKENLAKYSFVYKVTATDLDVDENAALTYDI--IDGNTDDMFN 1254

Query: 103  IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT---IVEVSVVPGPNTRSPVFQQ 157
            I+P +G I   G L    Q  YS+ +QA D G  ++ T   +V +SV+   N  +P+F  
Sbjct: 1255 INPGTGQISLNGNLDTETQDLYSLQIQAADNGKSTTFTASAMVIISVL-DVNDNTPLFHL 1313

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+VN+ E A +   +  +T
Sbjct: 1314 TVYEVNIREDAKLGEKLIQVT 1334



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 16/191 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            + + +NLDR+      +   VIA    E   +  S    + + + D+NDN+P       I
Sbjct: 1824 IYTLQNLDRE--TRSVYSLVVIATDQAEPSSSQKSTTTEVIITILDVNDNSPEFVTPSQI 1881

Query: 60   QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI 117
             ++   +   IV  + A D D GVNA++ YS+        H  F I P +G I  + +L 
Sbjct: 1882 WVKENSSVGSIVYTVSAVDIDEGVNAKVMYSL------ASHPVFSISPSTGQISLSSQLN 1935

Query: 118  AG--EQYSITVQATDTGGKSS-QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                + Y++ V ATD G +S   T   V +V   N   PVF  + Y   V E   I +T+
Sbjct: 1936 RELIQNYTLQVIATDQGLESRFSTQKLVIMVEDVNDNPPVFVPSVYSKTVREDVKIGTTL 1995

Query: 175  ATITVSRLASG 185
              +T +   SG
Sbjct: 1996 LQVTATDSDSG 2006



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 19/186 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +   + LDR+     +++  V+A +      +   ++ + + D+NDNAP   M       
Sbjct: 2142 ITCNQTLDRE--QVPQYKVLVVAIDSGSERLTGTGTIYIEVEDVNDNAP---MFDRSSTY 2196

Query: 63   AGEARR------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             G  +        I+ + ATDND G NA+I+YS+    +    +F I+  SG++ T+ KL
Sbjct: 2197 VGHVQENQPGPTDILTVTATDNDSGPNAQISYSLLDDVD---GRFAINTTSGIL-TSQKL 2252

Query: 117  IAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            +  E    Y +TV A D G  +      ++V V   N   P F++ TY+  ++   S+  
Sbjct: 2253 LDREDTALYHLTVVAKDHGNLAKSAEANITVYVDDVNDNVPQFEKQTYNKTLNNPTSLGQ 2312

Query: 173  TVATIT 178
             V  +T
Sbjct: 2313 FVVGVT 2318



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 11/169 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIE 74
            +  QVIA ++   +      L + + D+NDN P    +P +  +      +I    +++ 
Sbjct: 1942 YTLQVIATDQGLESRFSTQKLVIMVEDVNDNPPVF--VPSVYSKTVREDVKIGTTLLQVT 1999

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
            ATD+D G+N  + + I   S      F +DP SGV+     L      +Y++T+QA D G
Sbjct: 2000 ATDSDSGLNGVVRFFI--TSGDDNADFSMDPSSGVLRVQKNLDYERVNKYTLTIQAEDMG 2057

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                 ++  V++ +   N   PVFQ + +   V E  + +  V  IT+S
Sbjct: 2058 VSPRYSVASVTITIQDVNDFQPVFQNSPFYALVRENMASSPPVPVITLS 2106



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 12/166 (7%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDND 79
            VIA +    A S    +T+ + D ND+AP          +   A +  R +  +     D
Sbjct: 2794 VIATDLGTPAKSSEAIITIEIIDANDHAPVFDQDLYFSAVPESAPQGERILTVLAQDKLD 2853

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---GEQYSITVQATDTGG--K 134
            +G NAE+ Y I   S  G   F I+  +G+I T  ++++    + ++IT++A D G   K
Sbjct: 2854 VGQNAEVEYFIE--SGNGSSYFFINKTTGLI-TVAQVLSTKRNQDFTITIRAEDKGMPPK 2910

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S+   V +S+    N+ +PVFQ  +   NV E A I  +VA +T +
Sbjct: 2911 SATVPVHLSIT-AENSYTPVFQPASRVYNVQEDAPIGQSVARVTAT 2955



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 14/185 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGE 65
            NLD +  +    + Q  A   + T  +    + +++ D+NDN P   + +  + I +  +
Sbjct: 1267 NLDTETQDLYSLQIQA-ADNGKSTTFTASAMVIISVLDVNDNTPLFHLTVYEVNIREDAK 1325

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
               +++++ A D DLG+NAEI YS+     T    F +D  +G +    KL+  E    Y
Sbjct: 1326 LGEKLIQVTADDTDLGINAEIEYSLSESDGT----FVLDSHNGNL-YLAKLVDYETRKVY 1380

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S+ V ATD G    SS+  + V ++   N  SP F  +   +++SE     S++  I  +
Sbjct: 1381 SLKVIATDKGDPRLSSEADLNVRII-DVNDNSPEFTNDFSVLSISESTERFSSIGQILAN 1439

Query: 181  RLASG 185
               SG
Sbjct: 1440 DKDSG 1444



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 20/160 (12%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEA 75
            KF   V A +   +  S  + + V++ D+ND+ P  P     I ++       Q   + A
Sbjct: 957  KFNLTVTASDSSPSPNSASMVVQVHIVDVNDHNPVFPKTDYAITLEESTLVNTQFHTLTA 1016

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--------YSITVQ 127
            TD D+G NA + Y+I   ++ G  KF I P        GKL   +Q        Y +TV 
Sbjct: 1017 TDADVGRNAALVYNITKGNDDG--KFGIFPN-------GKLYIAKQLDRETRDLYKLTVM 1067

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            A D G  +  + V V++ +   N   P F   TY   VSE
Sbjct: 1068 AQDHGAPARSSEVNVTIHILDSNDNRPRFLNQTYSFYVSE 1107



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 16/180 (8%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE 65
            ++LDR+  +  ++   V A    GT+    V + V + D NDN P        +++Q   
Sbjct: 848  KSLDRE--HISRYDLTVTATTNDGTSE---VKVIVTVLDANDNKPEFKYEFLDVELQENS 902

Query: 66   A-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQY 122
            A   ++    A D+D G N  ++Y++   +NT     +I+  +G+I  +   + + G ++
Sbjct: 903  AVGHEVYYAFAVDDDSGQNGLLSYAL--TTNTNF--VQINQNTGMITMSKPYQRVYGNKF 958

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ++TV A+D+     S+  +V+V +V   N  +PVF +  Y + + E   +N+   T+T +
Sbjct: 959  NLTVTASDSSPSPNSASMVVQVHIV-DVNDHNPVFPKTDYAITLEESTLVNTQFHTLTAT 1017



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 19/179 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVK 72
            F   ++A +K   + S  V + +N+ D+NDN P+       Q  AG+          ++ 
Sbjct: 1733 FSLTILASDKGSPSQSTSVLVYLNVKDVNDNEPQFNH----QSYAGQVLENAAVGTVVLT 1788

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ++ATD D G+N ++ YS+   +++    F I   +G I T   L    +  YS+ V ATD
Sbjct: 1789 VQATDIDSGINGQLKYSLLEGNSSS--DFGIGTDNGTIYTLQNLDRETRSVYSLVVIATD 1846

Query: 131  TGGKSS---QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                SS    T  EV + +   N  SP F   +  + V E +S+ S V T++   +  G
Sbjct: 1847 QAEPSSSQKSTTTEVIITILDVNDNSPEFVTPS-QIWVKENSSVGSIVYTVSAVDIDEG 1904



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 34/200 (17%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-------- 53
            L ++K+ LDR+  +   ++  V+A++    A S  V++T+++ D NDN PR         
Sbjct: 1048 LYIAKQ-LDRETRD--LYKLTVMAQDHGAPARSSEVNVTIHILDSNDNRPRFLNQTYSFY 1104

Query: 54   --PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
                +PP Q        +I  ++A D D+G NAE+ + +    +     F ID ++G I 
Sbjct: 1105 VSENVPPGQ--------KIGAVKAVDADIGRNAELAFLLPEDQD----DFAIDFQTGEIT 1152

Query: 112  TTGKL--------IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDV 162
            T               + YS+ V   D G +  Q  V   + V   N   P F ++ Y  
Sbjct: 1153 TLRSYDREALVSETGNDYYSVVVTVVDNGVQRQQDSVTARIYVLDQNDNPPHFDRDIYRT 1212

Query: 163  NVSEGASINSTVATITVSRL 182
            +V E  +  S V  +T + L
Sbjct: 1213 SVKENLAKYSFVYKVTATDL 1232



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 24/166 (14%)

Query: 41  VNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           + ++D NDN P   L        ++      +++++ATD+D+G N  I Y++   S    
Sbjct: 236 IQVSDANDNPPIFSLSQYTSTVNESSPVDTLVIRVDATDDDIGENGNIFYTMTDES---- 291

Query: 99  HKFRIDPRSGVIETTGK-----------LIAGEQYSITVQATDTGGKS--SQTIVEVSVV 145
            +F+ID R+G I T               + GE   +T++A D G  S   +  V+VS +
Sbjct: 292 KQFKIDERTGEIRTVSTPLHCYCDGSQVCLPGECLFLTLEARDGGNPSLNGRAYVKVS-I 350

Query: 146 PGPNTRSP---VFQQNTYD-VNVSEGASINSTVATITVSRLASGCA 187
              N  +P   V  Q   D ++V+E A     V  ITVS   SG +
Sbjct: 351 KDENDHAPTINVMNQGPNDYISVNETAKNGDYVVAITVSDADSGMS 396



 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 24/181 (13%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQI 70
            D  N  K+   VIAR          V +TV++  +N+  P           +   A   +
Sbjct: 3105 DYENQIKYSMVVIARNPNNVNMRNTVKVTVHVTSVNEYYPEFVQKTYAFSTKESAANGSV 3164

Query: 71   V-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK------------LI 117
            + K+ ATD D G++  + Y  Y + ++ +  F ++ ++G I  +GK            ++
Sbjct: 3165 IGKVSATDRDKGIDGVVYY--YLIGSSNVKGFSVNYKTGDIFVSGKPDYESSPHVVLNVL 3222

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A    S+    TDT        V +SV    +  +PVF Q+ Y  ++ E ++   TV T+
Sbjct: 3223 AKNWESVKGNDTDT------CTVTISVEDAND--APVFTQSLYQASILENSAGGVTVTTV 3274

Query: 178  T 178
            T
Sbjct: 3275 T 3275



 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 23/174 (13%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            F   V A E      S    + +N+ D NDN PR      I  I+ +      ++  + A
Sbjct: 2468 FHLWVQATEGDNLLLSAYKEVVINIVDENDNTPRFQEGVYITSIR-ENVPVSSKVYTVNA 2526

Query: 76   TDNDLGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            TD D G N ++ Y +   +V N     F +DP +GVI+T   L    Q  Y++ ++A D 
Sbjct: 2527 TDADSGDNGKVVYVLAGGNVDNIQ-GTFNVDPVTGVIQTKVALDRETQDFYNLIIEAHDM 2585

Query: 132  G-------GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            G            T+++V      N  SP F    + V + E   +NS +  +T
Sbjct: 2586 GLIRRTGTTTVRVTLIDV------NDNSPTF-STIFSVTIPEDLPVNSFIIQVT 2632



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 43   LNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            L D+NDN+P    I  + I +       I+++ +TD D+G+NA+  YSI   +N   + F
Sbjct: 2600 LIDVNDNSPTFSTIFSVTIPEDLPVNSFIIQVTSTDKDIGINAKAHYSIDTTANYS-NLF 2658

Query: 102  RIDPRSGVI 110
             ID  SG I
Sbjct: 2659 NIDADSGNI 2667



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 7/120 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQ-YSIT 125
           I  + A D D G+NA++TY I   +N     F I+  +G++    +L   +A E   +I+
Sbjct: 494 IANLVAEDKDSGINAKLTYKILSGNNNDW--FEINSETGLVTLKKQLKYNLAPEVVMNIS 551

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VQ   +    + T + V +    N  +P F Q++Y V++ EG  + + V ++T +   SG
Sbjct: 552 VQDGASVPLFNYTKLTVRI-SDENDVTPTFSQSSYQVHLLEGLQLGTEVISLTAADSDSG 610



 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%)

Query: 32  AASVPV----SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            ASVP+     LTV ++D ND  P        Q+   E  +   +++ + A D+D G+N 
Sbjct: 555 GASVPLFNYTKLTVRISDENDVTPTFSQ-SSYQVHLLEGLQLGTEVISLTAADSDSGLNG 613

Query: 85  EITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            + YS++  V       F ++ +SG + T  +L      QY + V A D      Q+++ 
Sbjct: 614 SVIYSLHPEVQEMYPDTFNVNIQSGRVITLKQLDRETLSQYVLKVIARD------QSVLP 667

Query: 142 VS-------VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +S        V   N   PVF    Y  NV + A+  + V  +
Sbjct: 668 LSSTATIYLTVDDENDNVPVFYPQKYYTNVLKSATSGTKVVKV 710


>gi|296489410|tpg|DAA31523.1| TPA: cadherin, EGF LAG seven-pass G-type receptor 2 [Bos taurus]
          Length = 2920

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 238 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 290

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPRSGVIRTRG 350

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  + T      V   N  +P F +  Y V V E  +
Sbjct: 351 PVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVA 410

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 411 PGAPVLRVTAS 421



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 778 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 829

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 830 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 888

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T ++V+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 889 YAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 943



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 573 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 631

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 632 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 682

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VN++E     +TV  I+ +   +G
Sbjct: 683 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 739



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 728 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 783

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 784 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 842



 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 869  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVF 926

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 927  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYX 984

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 985  DRPEYVLVIQATSAPLVSRATV 1006



 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 10/144 (6%)

Query: 38  SLTVNLNDINDNAPRLPMIP-PIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ +++ D NDNAP+       +Q++   A    ++++ A+D D G NA + YSI  +S 
Sbjct: 381 AIFLSVEDDNDNAPQFSEKRYVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSI--MSG 438

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNT 150
               +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+   N 
Sbjct: 439 NARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL-DIND 497

Query: 151 RSPVFQQNTYDVNVSEGASINSTV 174
            +P+F    +   V E   +   V
Sbjct: 498 NAPIFVSTPFQATVLESVPLGYLV 521


>gi|291387481|ref|XP_002710171.1| PREDICTED: protocadherin alpha 13 [Oryctolagus cuniculus]
          Length = 2126

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 17/199 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           ++ K++LDR+     +F   + A +    A S  V L V + D+NDN P     P  +++
Sbjct: 189 LILKKSLDRE--KTPEFSLLLTATDGGQPALSGTVHLLVCVLDVNDNDPEFDQ-PEFKVR 245

Query: 63  AGE--ARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E  AR  +V ++ ATD D GVN E+TYS+  +  +G   F +D  SG +   G L   
Sbjct: 246 LTENSARGTLVTQLNATDRDEGVNGEVTYSMVSIKPSGRPLFSLDESSGEVRVNGTLDYE 305

Query: 120 EQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           E   Y I +QATD G    +    + V ++   N   P     +  V + E A + + +A
Sbjct: 306 ESKFYEIEIQATDKGIPPMAGHCTILVEIL-DENDNPPEVVVTSLLVPIREDAPVGTVIA 364

Query: 176 TITVSRLASG------CAI 188
            ++VS   SG      CA+
Sbjct: 365 LVSVSDRDSGANGQVSCAL 383



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V +++LDR+          V+   + G   SV + + V   D+NDNAP    P    + 
Sbjct: 952  LVLRKSLDREEIAELTLLLMVVDGGRPGLTGSVQIQVAVL--DVNDNAPAFEEPAYRVVL 1009

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHV-SNTGLHKFRIDPRSGVIETTGKLIAG 119
             +  +    +V + A+D D G N EI+Y I  +   +    F I+P +G I   G L   
Sbjct: 1010 SENVQNDTSVVHLNASDPDEGPNREISYGIRTILPESKKCTFVINPDTGEIRIYGILDYE 1069

Query: 120  EQ--YSITVQATDTG 132
            E   Y I VQATD G
Sbjct: 1070 ENDAYEIQVQATDKG 1084



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 16/166 (9%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
            V L + + D+NDNAP    ++  +++        +V ++ ATD D G N ++ Y+    +
Sbjct: 1605 VQLLIEVLDVNDNAPAFDQLLYKVRLLENVFNGTVVIQLNATDPDDGANGDVVYAFRKPT 1664

Query: 95   NTGL-HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG--KSSQTIVEVSVVPGP 148
               +   F I P +G I T GKL   EQ   Y I V+A D G   ++    + V V+   
Sbjct: 1665 PPAVASAFVIHPSTGEIRTKGKL-DFEQTKLYEIYVEAIDKGNIPRTGHCTLLVEVL-DI 1722

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAI 188
            N   P     +  + + E A + + +A ++VS   SG      CA+
Sbjct: 1723 NDNVPEITITSLSLPIREDAPVGTVIALVSVSDRDSGANGQVSCAL 1768



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 32/153 (20%)

Query: 41   VNLNDINDNAPRLP----------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            V + D+NDN P  P          +IPP      E R  +    A+D D+GVN+ +TY +
Sbjct: 1500 VEVRDVNDNPPVFPESKKRIIIPELIPP------ETRFPLDG--ASDADIGVNSALTYRL 1551

Query: 91   ----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK-----SSQTIVE 141
                Y   +T  ++ +    S V+  T      +++S+ + A D GGK     + Q ++E
Sbjct: 1552 DPNDYFSLDTQNNREQTSSLSLVLRKTLDREEMQEHSLLLTAVD-GGKPELTGTVQLLIE 1610

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V  V   N  +P F Q  Y V + E    N TV
Sbjct: 1611 VLDV---NDNAPAFDQLLYKVRLLENV-FNGTV 1639



 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 21/154 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--- 90
             +L V + DINDN P + +     PI+  A      I  +  +D D G N +++ ++   
Sbjct: 1713 CTLLVEVLDINDNVPEITITSLSLPIREDA-PVGTVIALVSVSDRDSGANGQVSCALTPD 1771

Query: 91   --YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG----KSSQTIVEVSV 144
              + + +T  + + +   SG+     +L++G  Y + V A D G      S+   VEV+ 
Sbjct: 1772 VPFRLLSTFRNYYSLVLDSGLDR---ELVSG--YGVVVTARDAGSPALRASASVWVEVAD 1826

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   N  +P F Q  Y V V E  +    + T++
Sbjct: 1827 V---NDNAPAFAQAEYTVFVRENNAPGCHLVTVS 1857


>gi|300793712|ref|NP_001179860.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Bos
           taurus]
          Length = 2920

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 238 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 290

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPRSGVIRTRG 350

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  + T      V   N  +P F +  Y V V E  +
Sbjct: 351 PVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVA 410

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 411 PGAPVLRVTAS 421



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 778 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 829

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 830 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 888

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T ++V+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 889 YAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 943



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 573 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 631

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 632 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 682

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VN++E     +TV  I+ +   +G
Sbjct: 683 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 739



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 728 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 783

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 784 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 842



 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 10/144 (6%)

Query: 38  SLTVNLNDINDNAPRLPMIP-PIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ +++ D NDNAP+       +Q++   A    ++++ A+D D G NA + YSI  +S 
Sbjct: 381 AIFLSVEDDNDNAPQFSEKRYVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSI--MSG 438

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNT 150
               +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+   N 
Sbjct: 439 NARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL-DIND 497

Query: 151 RSPVFQQNTYDVNVSEGASINSTV 174
            +P+F    +   V E   +   V
Sbjct: 498 NAPIFVSTPFQATVLESVPLGYLV 521



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 869  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVF 926

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 927  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 984

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 985  DRPEYVLVIQATSAPLVSRATV 1006


>gi|7510138|pir||T27110 hypothetical protein Y52B11B.2 - Caenorhabditis elegans
          Length = 1439

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 12/152 (7%)

Query: 38  SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQ---IVKIEATDNDLGVNAEITYSI 90
           +L + + D+N+N P  P         +I  G  +     IVK+EATD+D   N +I YS+
Sbjct: 485 TLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL 544

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-V 145
           Y+  +     F ID ++GV+  +  ++   +      +TV+ATD G +      + SV V
Sbjct: 545 YYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV 604

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  SP F++ +Y+ +VS   ++ ++V T+
Sbjct: 605 VDINDNSPQFERPSYETSVSRFEAVGTSVITV 636



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 9    LDRDPP-NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ----- 60
            LDRDPP     + F V A +  G        + VN+ DINDN+P  P  +   I+     
Sbjct: 1153 LDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREP 1212

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN---TGLHKFRIDPRSGVIETTGKL- 116
            I +       V+    D+    NA I Y I  V N    G   FRID  +G I     L 
Sbjct: 1213 IHSDGVYFMDVQARDFDDPTTENANIEYGI--VRNKLINGESVFRIDQNTGKIFAMRSLD 1270

Query: 117  --IAGE-QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              I+ E ++ I V+A D G  S +    V++ V   N  +P F++  Y+ +V E A I +
Sbjct: 1271 REISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGA 1330

Query: 173  TVATIT 178
             V + +
Sbjct: 1331 AVMSFS 1336



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 20/130 (15%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARR 68
           DP  P   + +V ARE    +    V LT+ ++D+NDN P     P    Q  E     +
Sbjct: 239 DPALPKLHKLKVTAREDNRESH---VDLTIRIDDVNDNVPTFTR-PLYTAQVREDIPLNQ 294

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------Y 122
            I+K+ A D D G N+ ITYS+ +      H F I+  +G I    +L A +       Y
Sbjct: 295 TILKVTAVDKDTGDNSRITYSVDN------HNFSINS-NGEISAKVRLDADQLNERHFVY 347

Query: 123 SITVQATDTG 132
              V A D G
Sbjct: 348 RFNVTARDHG 357



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 38  SLTVNLNDIND-----NAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           ++ +++ DI++     N+P LPM+   P+    G    Q V   A D     ++ + Y  
Sbjct: 43  TIRIHVADIDEPPSFVNSP-LPMLAVVPLNPTIGRIVYQFV---ARDEHGDGDSNVLYKT 98

Query: 91  YHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYSITVQATDTGGKSSQT--IVEVSVVP- 146
             V   G   F +DP+SGV+ T   K   G+ Y I+ QA D     + T  + EV+++  
Sbjct: 99  IDVIPAG--SFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEI 156

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             + R P F +  Y+V VSE   ++ +V  +      S
Sbjct: 157 LADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRS 194


>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
            rotundus]
          Length = 4593

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2546 IFTLEKLDREIPAEKVIAVRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATKYEVNI 2603

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +   +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI  E
Sbjct: 2604 GSNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGLE 2663

Query: 121  Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               ++  V+A D G   K+S   V V ++P P T+ P F +  Y   VSE   I + +  
Sbjct: 2664 DEVFTFFVRAVDHGSPPKASVVPVYVKILP-PETQLPKFSEPFYTYTVSEDMPIGTEIDV 2722

Query: 177  I 177
            I
Sbjct: 2723 I 2723



 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P   +    +  A  +       +++++ A   D+  NAEITYSI  
Sbjct: 3213 TVVVSVLDINDNPP---VFEYREYSASVSEDTLIGTEVLQVYAASRDIEANAEITYSI-- 3267

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF IDPR+G I     L   +  +Y +TV+ATD G  S   +  V+V V   N
Sbjct: 3268 ISGNEHGKFSIDPRTGAIFLIESLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3327

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+ Y   +SE A +   V T+
Sbjct: 3328 DNTPVFSQDPYTAVISEDAVLEQPVITV 3355



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  KE LDR+  +   +   V A +  GT AS  + + V + D NDN+P         
Sbjct: 2974 WKVYVKEPLDRERQD--SYLLTVTATD--GTFASKAI-VEVKVLDANDNSPVCEKTLYSD 3028

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T  
Sbjct: 3029 TIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTLA 3081

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y + V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3082 PLDREEQAVYHLVVKATDGGGRFCQANI-VLTLDDVNDNAPEFSADPYTMTVFE 3134



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 37   VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    
Sbjct: 1544 VRIVVNVSDTNDHAPWFTSSSYEGRVYESAATGSVVLQVTALDKDKGRNAEVVYSI-ESG 1602

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            N G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  
Sbjct: 1603 NIG-NSFTIDPILGSIKTAKELDRSNQVEYDLIVKATDKGSPPMSEITSVHVFVTIADNA 1661

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            SP F    Y V +SE   I S V  +T    +S
Sbjct: 1662 SPKFTSKEYSVEISETIGIGSFVGMVTAHSQSS 1694



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDN 78
            + ++ +   G       ++ + L+D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3091 YHLVVKATDGGGRFCQANIVLTLDDVNDNAPEFSADPYTMTVFENTEPGTLLTRVQATDP 3150

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D G+N +I YS+    ++   +F I   SG+I+    L    Q  Y++T++ATD G    
Sbjct: 3151 DAGLNRKIVYSL---PDSADGQFSISESSGIIQLEKPLDRELQAVYTLTLKATDQGLPRR 3207

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++ + V VSV+   N   PVF+   Y  +VSE   I + V  +
Sbjct: 3208 LTATSTVVVSVL-DINDNPPVFEYREYSASVSEDTLIGTEVLQV 3250



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  V + V + D+NDNAPR   P+  P 
Sbjct: 1088 VIETSDRLDRE--SAPHYWLTVYATDQGVVPLSSFVEIYVEVEDVNDNAPRTSEPVYYPE 1145

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+I+A D D   + ++TY I   +  G   F I PR+G+I TT + +  
Sbjct: 1146 VMENSPKDVSVVQIDALDPDSSSSDKLTYKITSGNPQGF--FSIHPRTGLITTTSRRLDR 1203

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     T+  V V +   N   P F Q  Y + + E
Sbjct: 1204 EQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQFLQKFYKIRLPE 1254



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V++ D+NDN PR   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 909  VLLKVSVEDVNDNPPRF--IPPNYRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLL- 965

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 966  --DPGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDV 1023

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF        V E   I S+V T++     +G
Sbjct: 1024 NENLHPPVFPSFVEKAVVKEDVPIGSSVMTVSAHDEDTG 1062



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 11/150 (7%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ DINDN P     P   + + +A   + ++ + A D D  +N+ I YSI    N
Sbjct: 3318 TVNVNVTDINDNTPVFSQDPYTAVISEDAVLEQPVITVMADDADGPLNSHIHYSIID-GN 3376

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G   F IDP  G ++ T KL+  E    Y++TVQA+D G   +++ T V + V    N 
Sbjct: 3377 QG-SPFTIDPARGEVKVT-KLLDRETISGYTLTVQASDNGSPPRANTTTVNIDV-SDVND 3433

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +PVF +  Y V + E   +  +V  + V+
Sbjct: 3434 NAPVFSRENYSVIIQENKPVGFSVLQLLVT 3463



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  I ++ ATD D G NAEI+YSI 
Sbjct: 1231 VKILDENDNKPQFLQKFYKIRLPEREKPERERTTKREPIYRVIATDKDEGPNAEISYSIE 1290

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  +F I+P++G++ +     AGE   ++++A D G   K S T + +  +  P 
Sbjct: 1291 EGNEHG--RFFIEPKTGLVSSKKFSGAGEYDILSIKAVDNGRPQKWSTTRLHIEWISKPK 1348

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P      F+++ +   V E   +   +  I+V
Sbjct: 1349 PPPEPISFEESFFTFTVMESDPVAHMIGVISV 1380



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 18/161 (11%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEARRQIV 71
            ++F ++AR   E     ASV VS+ V   D NDN+P L   P     ++ Q G +R  ++
Sbjct: 2772 YQFSILARCTPEDDEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENQPGGSR--VI 2827

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            ++ A+D D G N ++ YS+    +  +   F I+  +G I T  +L   ++  Y I V A
Sbjct: 2828 QVRASDLDSGTNGQVMYSLDPSQSVDITESFAINMETGWITTLKELDHEKRDNYQIKVVA 2887

Query: 129  TDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2888 SDHGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2927



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + D+NDN       PP+ +Q   A            +V++ ATD+D  
Sbjct: 2259 TGAHAEVFVDIVVEDVNDN-------PPVFVQQSYAATLSEASVIGTSVVQVRATDSDSE 2311

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQ 137
             N  ++Y ++   +     F +D  +G+I     L   +  Q+ I V+A D G    SS 
Sbjct: 2312 PNRGVSYHMFGNHSKSYDHFHVDSSTGLISLVRTLDYEQVHQHKIFVRAIDGGMPPLSSD 2371

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F Q  Y+  +SE A
Sbjct: 2372 VIVTVDVT-DLNDNPPLFDQQIYEARISEHA 2401



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVN 83
            PVSL+      V + D+N+N    P + P  ++    +  +      + + A D D G +
Sbjct: 1007 PVSLSSTCYVEVEVIDVNENLH--PPVFPSFVEKAVVKEDVPIGSSVMTVSAHDEDTGRD 1064

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
             EI YSI   S  G+  F+ID  +GVIET+ +L   +   Y +TV ATD G     + VE
Sbjct: 1065 GEIRYSIRDGSGVGV--FKIDEETGVIETSDRLDRESAPHYWLTVYATDQGVVPLSSFVE 1122

Query: 142  VSVV------PGPNTRSPVF 155
            + V         P T  PV+
Sbjct: 1123 IYVEVEDVNDNAPRTSEPVY 1142



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +  + + +N + P+     P  I+  E R     IV + ATD D G N ++ Y+I   + 
Sbjct: 700 ILFDAHSVNAHTPQFRSTLPAGIEVKENRPVGSSIVLVNATDLDTGFNGKLVYAISGGNE 759

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
                F ID  +G+++    L     ++Y++ +  +D G   K++  ++ V V+   N  
Sbjct: 760 DSC--FLIDMDTGMLKILSPLDRETTDKYTLNITVSDLGIPQKAAWHLLAVRVLDA-NDN 816

Query: 152 SPVFQQNTYDVNVSEGASINSTV 174
            P F Q +Y V VSE   +NS +
Sbjct: 817 PPEFFQESYFVEVSEDKEVNSEI 839



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P SG I T   L   A   Y++TVQ T+  G S+ + V V +    N  +PVF Q 
Sbjct: 1708 FDINPHSGSIITQKALDFEALPVYTLTVQGTNMAGLSTNSTVLVHL-QDENDNAPVFTQA 1766

Query: 159  TYDVNVSEGASINSTVAT 176
             Y   +SE ASINS V T
Sbjct: 1767 EYTGRISESASINSVVLT 1784



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
            V +TV++ D+NDN P          Q  EAR          +  ++A D D     ++ Y
Sbjct: 2372 VIVTVDVTDLNDNPPLFDQ------QIYEARISEHAMHGHFVTCVKAYDADSSDVDKLEY 2425

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
            SI  +S      F +D  +G+I  +   +       S+ +  +D   +SS   V V+V+ 
Sbjct: 2426 SI--LSGNDHKNFVMDSETGIITLSNLRRHTLKPFSSLNISVSDGVFRSSAQ-VHVTVIG 2482

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G N  SPVF QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2483 G-NLHSPVFPQNEYEVELAENAPLHTLVVEVPATDGDSG 2520



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 6/119 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV--IETTGKLIAGEQY-SITV 126
            +V++ ATD D GV  +ITY I  V++    +F  + R  +  +E   + I  E+  ++ +
Sbjct: 2509 VVEVPATDGDSGVYGDITYHI--VNDFAKDRFYTNERGQIFTLEKLDREIPAEKVIAVRL 2566

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             A D GGK +   + V ++   N  +P F+   Y+VN+   A   ++V  +  S    G
Sbjct: 2567 MAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKYEVNIGSNAPKGTSVIKVLASDADEG 2624



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 9/116 (7%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           V A EK   A +  V + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 118 VKALEKNSNAEARTV-VRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 176

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           G N E  YS    ++     F I P SG I  TG+L   E  +Y + + A D G K
Sbjct: 177 GTNGEFYYSFKDRTDM----FAIHPTSGTIVLTGRLDHAETPRYEMEILAVDRGMK 228



 Score = 42.7 bits (99), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDN P         ++  E +    +I+++EATD DLG N ++TYS+   ++
Sbjct: 806 LAVRVLDANDNPPEF-FQESYFVEVSEDKEVNSEIIQVEATDRDLGPNGQVTYSLLTDTD 864

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T    F ID  +GV+     L    Q  + + V+A D   +  Q    V +   V   N 
Sbjct: 865 T----FSIDSVTGVVTVVRPLDPEVQHVHYLKVEARDQATEEPQLFSTVLLKVSVEDVND 920

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 921 NPPRFIPPNYRVKVRE 936



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T   L   A  Q+
Sbjct: 1472 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTAEALDHEAVHQH 1526

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +  V + V V   N  +P F  ++Y+  V E A+  S V  +T
Sbjct: 1527 VLTVMVRDQDVPVKRNFVRIVVNVSDTNDHAPWFTSSSYEGRVYESAATGSVVLQVT 1583


>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
 gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
          Length = 3590

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 26/197 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 409 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSP---TFEAEQF 463

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++ +GL +      FRID RSGV
Sbjct: 464 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGSGLAQTQEMPIFRIDSRSGV 523

Query: 110 IETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVN 163
           I T   L     + Y++ V A+D    +S +     SV   V   N   P F + TY V 
Sbjct: 524 ISTRSSLDRETSDSYNLVVTASDMASAQSERKTATASVLVKVLDDNDNYPQFSERTYTVQ 583

Query: 164 VSE---GASINSTVATI 177
           V E   G+S ++TVA I
Sbjct: 584 VPEDQWGSSEDNTVAHI 600



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 649 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 708

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ--ATDTG-- 132
           D+D G NAEI+YSI    +       +DPR+G ++T  +L   EQ   T Q  A D G  
Sbjct: 709 DSDEGANAEISYSISERDDN--FPLAVDPRTGWVQTIKQLDREEQSRFTFQVVAKDGGVP 766

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 767 PKSASSSVVITVQDV---NDNDPNFNPKYYEANVGEDQPPGTPVTTVTAT 813



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 858  RFLLTVTATDSGGRSDTATVH--INITDANNFAPIFENAPYSSSVFEDAPVGTTVLVVSA 915

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+G+NA+ITYS+   S  GL     F I+ ++G I T   L       Y +TV A D
Sbjct: 916  TDSDVGINAQITYSLNEESINGLGTADPFSINQQTGAIVTNAPLDRETTSGYLLTVTAKD 975

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G    S  T VE+SV    N  +P+F+   Y  ++ E A + ++V  ++ S
Sbjct: 976  GGNPSLSDTTDVEISVT-DVNDNAPMFKNPLYQSSILEDALVGTSVIQVSAS 1026



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V + + LDR+     +F FQV+A++      S   S+ + + D+NDN P      P   
Sbjct: 739 WVQTIKQLDRE--EQSRFTFQVVAKDGGVPPKSASSSVVITVQDVNDNDPNF---NPKYY 793

Query: 62  QAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIET 112
           +A     Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  
Sbjct: 794 EANVGEDQPPGTPVTTVTATDPD--EDSRLHYEISTGNTRG--RFAITSQNGRGLITIAQ 849

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
           +      +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +
Sbjct: 850 SLDYKQEKRFLLTVTATDSGGRSDTATVHINITDA-NNFAPIFENAPYSSSVFEDAPVGT 908

Query: 173 TVATITVS 180
           TV  ++ +
Sbjct: 909 TVLVVSAT 916



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + +++ D+NDNAP    P+     
Sbjct: 953  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPMFKNPLYQSSI 1010

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            ++       ++++ A+D D+G+N  I Y +    +     F IDP SG I T   L    
Sbjct: 1011 LEDALVGTSVIQVSASDPDIGLNGRIKY-LLSDRDVEDGSFVIDPTSGTIRTNKGLDRES 1069

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +T  A D G     + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1070 VAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEI 1129



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 401 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 458

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 459 EAEQFEASIREGATVGSTVITL 480



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 523 VISTRSSLDRETSD--SYNLVVTASDMASAQSERKTATASVLVKVLDDNDNYPQFSERTY 580

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q  + E    +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 581 TVQVPEDQWGSSEDN-TVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 637

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 638 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 694


>gi|198465879|ref|XP_001353802.2| GA19599 [Drosophila pseudoobscura pseudoobscura]
 gi|198150354|gb|EAL29536.2| GA19599 [Drosophila pseudoobscura pseudoobscura]
          Length = 1828

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 14/175 (8%)

Query: 3   VVSKENLDRDPPNPG--KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           V+    LD D P+P   KF F ++A  K    A   V   ++L D NDNAP     P  +
Sbjct: 439 VLDASRLDYDVPDPSQRKFEFDLVALVKGVQKAKARVE--IHLLDANDNAPVFDQ-PTYR 495

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             A E       I  ++ATD+D G   E  +  Y +   G   F +DP +G +    +L 
Sbjct: 496 FTAAENLATDYLIGHVKATDSDSG---EFGHVRYVLKGFGADNFNVDPETGGLYLQRQLD 552

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +Q  YS+TV A D GG+ S   + V VV   N   P F+   Y   + EGA+I
Sbjct: 553 YEKQSSYSLTVVAIDGGGRESNANLFVGVV-DVNDNHPNFEHKEYSRTIREGAAI 606



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 21/146 (14%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL----- 53
            +V   + +DR+       R QV A +  G    A    V L +++ D+NDNAP       
Sbjct: 1126 VVARDQTIDRE--RTPHIRLQVKAEDSPGKPTDAKQSVVDLLIDVLDVNDNAPVFTQKKY 1183

Query: 54   -PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIE 111
              +IP    +  +    ++++EA D D G+  E+ Y + +     GL  F+I+P++G++ 
Sbjct: 1184 STVIP----ENAQIDSFVLQLEALDADEGLGGEVRYELVNEGEANGL--FKINPQTGLLS 1237

Query: 112  TTGKLIA---GEQYSITVQATDTGGK 134
            T   L      E Y + V+A D G +
Sbjct: 1238 TRRNLTGKGRAEPYILIVRAQDNGSQ 1263



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 20/194 (10%)

Query: 3    VVSKENLDRD----PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--I 56
            V+ K+ LD +      N  +F  QV A       +++   L + + ++NDN+PR      
Sbjct: 1008 VILKKRLDYEVLAETGNGPEFELQVRASSADRQRSTIS-RLNITVENVNDNSPRFEQSSY 1066

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH---VSNTGLHK--FRIDPRSG-VI 110
                I+      ++V + A D D  +NA      YH    S  G H   F I+  +G V+
Sbjct: 1067 RATIIENRMHPERVVHVRAVDKDAVLNARDERLGYHKIIYSLQGEHAMLFEINNITGEVV 1126

Query: 111  ETTGKLIAGEQ---YSITVQATDTGGK---SSQTIVEVSV-VPGPNTRSPVFQQNTYDVN 163
                + I  E+     + V+A D+ GK   + Q++V++ + V   N  +PVF Q  Y   
Sbjct: 1127 VARDQTIDRERTPHIRLQVKAEDSPGKPTDAKQSVVDLLIDVLDVNDNAPVFTQKKYSTV 1186

Query: 164  VSEGASINSTVATI 177
            + E A I+S V  +
Sbjct: 1187 IPENAQIDSFVLQL 1200



 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 22/171 (12%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-----------LTVNLNDINDNAPRLPM 55
           +N + DP   G +  + +  EKQ + +   V+           L V + D+NDN P    
Sbjct: 534 DNFNVDPETGGLYLQRQLDYEKQSSYSLTVVAIDGGGRESNANLFVGVVDVNDNHPNFEH 593

Query: 56  IPPIQ-IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--V 109
               + I+ G A  +    V+   +D     N  +TY I   ++   + FRI+P +G  V
Sbjct: 594 KEYSRTIREGAAIFEPQFFVRAHDSDGPTQGNGRVTYGIVSENSIAGNVFRIEPDTGEIV 653

Query: 110 IETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           I+   + +  E  +Y +TV ATD G    S+ T V V V    N R P+F+
Sbjct: 654 IQKAARSMDTERGEYELTVSATDFGVPPLSNTTRVLVRVGISGNQR-PIFR 703


>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
          Length = 5463

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L D+NDN P  P   +   I+   G+  + I+++ ATD D G NA +TY+I   ++  
Sbjct: 2196 ITLQDVNDNPPVFPNDILDVTIEENVGDGFK-IMQLTATDADEGPNALVTYTIISGAD-- 2252

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T KL      +YS+ V+A D G +SS   + ++ V   N  SP F
Sbjct: 2253 -DSFRIDPESGDLIATKKLDRERRSKYSLLVRA-DDGKQSSDMRLNIT-VKDVNDHSPKF 2309

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             + TY  ++ E  +  S VA I  S   SG
Sbjct: 2310 SRATYSFDIPEDMAAGSIVAAILASDSDSG 2339



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 16/190 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            +++   LDR+      ++  V+A +    QG ++S  VS+TV   DINDN PR    P +
Sbjct: 2885 IITSSLLDRE--ERANYQLLVVATDGGQPQGLSSSATVSVTVA--DINDNPPRFHHHPYV 2940

Query: 60   -QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              I A  A   +V  +  TD D G NA++ YS+   S+    KF+IDP  G I    KL 
Sbjct: 2941 THIPASTAAGSLVFAVTVTDEDAGANAQLHYSLVGRSS---EKFKIDPVRGAITANEKLT 2997

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               + +++V+  D G   K   T V V  V G +   PV +         E    N  V 
Sbjct: 2998 GTSEVTLSVRVKDGGANPKMDMTTVTVRFVTGGSF--PVIKLKERAFTFPESQPTNHVVT 3055

Query: 176  TITVSRLASG 185
            T+T S +  G
Sbjct: 3056 TVTGSSMRGG 3065



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 18/190 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
            +++ + LDR+     + ++ ++ R   G  +S  + L + + D+ND++P+          
Sbjct: 2264 LIATKKLDRER----RSKYSLLVRADDGKQSS-DMRLNITVKDVNDHSPKFSRATYSFDI 2318

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  + AG     +  I A+D+D G+N E+TYS+          F ++P +GV   T  L 
Sbjct: 2319 PEDMAAGSI---VAAILASDSDSGINGEVTYSLEEDDED--ETFLLNPVTGVFNVTRPLD 2373

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q  Y +T +A D GG++S   V  +V+   N   P F  + Y  +VSE     S++ 
Sbjct: 2374 YEVQQFYILTAKARDGGGQASTVRVYFNVL-DVNDNPPAFNTSVYSTSVSESLPAGSSIV 2432

Query: 176  TITVSRLASG 185
            T+  S    G
Sbjct: 2433 TVGASDADDG 2442



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 14/157 (8%)

Query: 37   VSLTVNLNDINDNAPRLP---MIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            VS+TV++ D+NDN P        P +Q  + +G     +VK+ ATD D G NA + Y I 
Sbjct: 3646 VSVTVHVTDVNDNPPVFEPDEYFPVVQENVPSGTT---VVKMTATDGDSGANAVMAYVI- 3701

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              S++ L  F IDP +G I T G L   A + Y +TV+A +   +   +   V++ + G 
Sbjct: 3702 QSSDSDL--FVIDPNTGTITTQGFLDYEAKQVYHLTVKAFNVPDEERCSFANVNIQLKGA 3759

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   P F    Y   +SE A   + V  +  S    G
Sbjct: 3760 NEYVPRFVSKQYYFEISEAAPKGTVVGEVFASDRDQG 3796



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 14/172 (8%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIEA 75
            + +V+AR  + T  +    + V + D+NDNAP    I  ++    ++       I + +A
Sbjct: 1331 QLKVVARAGEITGEAF---VNVTVKDLNDNAPHF--IHAVEHVSAVENWGTGHVIFQAKA 1385

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-G 133
            +D D G N  + YS+   +  GL  F I  + G+I  TG L +    Y + V A D G  
Sbjct: 1386 SDPDEGTNGVVVYSLKQ-NPRGL--FHIHEKHGLITLTGPLEVTTSSYEVEVLAEDLGVP 1442

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            K + ++V +  V   N  SPVF Q +Y+V + E   +NS    +  +   SG
Sbjct: 1443 KHTSSLVLIISVYDVNDNSPVFDQLSYEVTILESEPVNSRFFKVEATDKDSG 1494



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K     S  + +T+ + D+NDN P     I  I+I+     
Sbjct: 2580 LDRE--ELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLT 2637

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               ++++ ATD D G N +I +SI    NT    FRID  +GVI    +L   A   YS+
Sbjct: 2638 GTDVIQVFATDADEGTNGQIRFSIPG-GNTN-SDFRIDSVTGVISVAKQLDREARSSYSL 2695

Query: 125  TVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             VQA D G   ++ Q  V + V+   N  SPVF+ + Y + V E
Sbjct: 2696 VVQAADRGSSPRTDQATVNI-VLLDVNDCSPVFELSPYTIGVQE 2738



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +  ++IA +      S    L++++ D NDNAP  P  P + +   E  R    +  + A
Sbjct: 1749 YSLKIIAVDAGAEPLSSSCMLSISILDENDNAPSFPK-PSVSVDVLENMRIGELVASVTA 1807

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G NA+ITYSI   +N G   F I P +G I    KL    Q  Y + V A D G
Sbjct: 1808 TDADSGQNADITYSITATNNHG--TFSISPSTGSIFLVKKLDYETQSVYRLNVSAKDNG 1864



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++  +V A ++     ++ V + +N+ D+NDNAPR   I    + +   A 
Sbjct: 3199 LDRE--KVAQYGLKVKATDRGLPQKNMAVRVLINVLDVNDNAPRFSKIFSATVAENAPAG 3256

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  TD D G NA   YSI   ++TGL  F I+P +G I  +  L     + Y + 
Sbjct: 3257 YTVTRVTTTDEDAGSNAVSRYSI---ADTGL-PFNINPSTGDITVSRPLNREDTDHYIVK 3312

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     +   N  +P F + +Y ++  E   + S V  +T +
Sbjct: 3313 VSAHDSGWTVSTDV--TIFITDINDNAPRFSRPSYYLDYPELTEVGSLVTQVTAT 3365



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 7/164 (4%)

Query: 24   IAREKQGTAASVPVS-LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDL 80
            I+ + QG    V  + L +N+ D+ND  P           ++   A  +++ + ATD+DL
Sbjct: 1020 ISAKDQGLQPRVSYTKLVINITDVNDQVPTFTQSTFHVSLVEHAPAGTELLVLSATDDDL 1079

Query: 81   GVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            G N  + +S       +    FR+D  SG + T  +L   E+  Y + VQA D G    +
Sbjct: 1080 GSNGTVHFSFDAETPASAQELFRLDALSGRLSTAAELDREERASYLLHVQAADGGSPPLR 1139

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   V+V +   N   PVF    Y  NV E     S V T++ +
Sbjct: 1140 SAGRVNVTLRDVNDNRPVFYPVQYFANVKENEPSGSYVTTVSAT 1183



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSN 95
            V L D+NDN P   +  P+Q  A     +     +  + ATD DLG N  + Y I     
Sbjct: 1146 VTLRDVNDNRP---VFYPVQYFANVKENEPSGSYVTTVSATDPDLGRNGTVKYMITAGDT 1202

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT--IVEVSVVPGPNTR 151
                KF I+  +G I T   L   E+  Y + V A D GG  S T  IV V+V+   +  
Sbjct: 1203 V---KFHINGNTGKIGTLVPLDREEKTTYQLQVAAADGGGLRSHTQAIVTVTVIDTQD-N 1258

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             PVF Q  Y   + E   + + + T++ +
Sbjct: 1259 PPVFSQKVYSFVMFENVGVGTVIGTVSAT 1287



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 23/165 (13%)

Query: 37  VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           + + V + DINDN P            +       ++++ A+D D G NAEI Y +   +
Sbjct: 711 LQVNVTIQDINDNPPSFEQDQYQTSVFEDAAVGSSVLQVAASDGDEGANAEIRYFLDEGT 770

Query: 95  NTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTG-----GKSSQTIVEVSVVPG 147
                 F+IDP++G  VI+      +  +YS+T+ A D G     G++  TI  + V   
Sbjct: 771 -----PFQIDPKTGTVVIKEGLDYESKREYSLTIHAVDNGVPSLSGRAEATIKLLDV--- 822

Query: 148 PNTRSPV-----FQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
            N   PV     F   +   +V E A I + VA +TVS   S  A
Sbjct: 823 -NDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSSAA 866



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 9/136 (6%)

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  I  G A R    + A D D  +N  ITY+I   ++ GL  F I+ RSGV+     L 
Sbjct: 3567 PESIAVGTAIR---TLSARDKDREMNGVITYNITSGNDRGL--FSINSRSGVLALAQPLD 3621

Query: 118  AGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              E  Q+++ V ATD G  S  + V V+V V   N   PVF+ + Y   V E     +TV
Sbjct: 3622 FEEKQQHNLRVSATDGGWISKTSYVSVTVHVTDVNDNPPVFEPDEYFPVVQENVPSGTTV 3681

Query: 175  ATITVSRLASGC-AIM 189
              +T +   SG  A+M
Sbjct: 3682 VKMTATDGDSGANAVM 3697



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-VSNT 96
            ++V L D+ND  P         IQ       +V  + A+D+D G N+ + YS+    SN 
Sbjct: 2505 VSVILLDVNDCPPTFTSQKMTYIQENTPVDTVVFAVHASDSDSGPNSYVEYSLRGPFSN- 2563

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS-VVPGPNTRSP 153
               KF I    G +   G+L   E   Y++TV ATD G     + ++V+ VV   N  +P
Sbjct: 2564 ---KFSIGTIDGDVRLVGELDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTP 2620

Query: 154  VFQQNTYDVNVSE 166
             F QN YD+ + E
Sbjct: 2621 SFSQNIYDIEIEE 2633



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPPIQIQAGEARRQIV 71
            N  +  F V A ++         ++ VN+ D NDN P+  +     P+        R I 
Sbjct: 3413 NINRHSFIVTASDRAVQPLMSETTVIVNIVDSNDNPPQFDLPNYFTPVTKSVKVGTRLIQ 3472

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             +     D G+N+E+ Y I         KF++D  SG I     L++   + +   V AT
Sbjct: 3473 VVANDKKDFGLNSEVEYLI--TGGNSSTKFKLDKTSGWITVASSLVSDVNKIFLADVTAT 3530

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    S++T V ++V    N  +P F Q+     V E  ++ + + T++
Sbjct: 3531 DRGNPPLSARTSVRIAVTE-ENHHTPEFSQSQVSATVPESIAVGTAIRTLS 3580



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 25/151 (16%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------RQIVKIEATDNDLG 81
            A S   SL + +NDIND+       PPI  Q  E R            I  + ATD D G
Sbjct: 924  ARSSFASLVIFVNDINDH-------PPI-FQETEYRVDVSEDIPKGSYIKGVSATDGDSG 975

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTGGKSSQT 138
             NA + YS+  VS   L  F I   SG++ + G L+  E  S   + + A D G +   +
Sbjct: 976  QNANLRYSL--VSGNALGWFSISENSGLVTSAG-LLDRETTSEIVLNISAKDQGLQPRVS 1032

Query: 139  IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
              ++ + +   N + P F Q+T+ V++ E A
Sbjct: 1033 YTKLVINITDVNDQVPTFTQSTFHVSLVEHA 1063



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 14/156 (8%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             ++TV+++D+NDNAP            +       ++ + ++D D+G N  I+ S     
Sbjct: 2816 CTVTVSVSDVNDNAPVFTASSFHTTITEDAPTGTDVLLVNSSDADVGNNGVISLS----- 2870

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPN 149
              G  +F I+P +G I T+  L   E+  Y + V ATD G   G SS   V V+V    N
Sbjct: 2871 -GGHGQFSINPATGQIITSSLLDREERANYQLLVVATDGGQPQGLSSSATVSVTVA-DIN 2928

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               P F  + Y  ++    +  S V  +TV+   +G
Sbjct: 2929 DNPPRFHHHPYVTHIPASTAAGSLVFAVTVTDEDAG 2964



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 20/176 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   ++A+++     S  V+++V L+D+NDN P       +   A E
Sbjct: 1523 KAELDREIQD--RYNLVLVAKDRAVEPLSASVNVSVLLDDVNDNRPLFNSTNYVFHFAEE 1580

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
             +R   + ++ A D D G N+EI Y+      T    F ++  +G + +T +        
Sbjct: 1581 QKRGSLVGRVFAEDKDFGPNSEIRYAF----ETPQANFELNAITGELTSTAQFDRESLMR 1636

Query: 118  --AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                  +S  V ++D G       Q  V+V  +   N   P F ++ Y  +VSE A
Sbjct: 1637 QRGAAVFSFVVLSSDQGLPRPLRDQAKVQV-YIQDINDNQPKFTKDIYQASVSESA 1691



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 19/163 (11%)

Query: 34  SVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNA--EITY 88
           + P  + + + DINDN+P  P   ++   +  A   R Q++   ATD D+G N     TY
Sbjct: 593 TYPTEVRILVLDINDNSPVFPDASIVVSFKEDASSGR-QVILDTATDTDIGSNGVDHTTY 651

Query: 89  SIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            I  V      +FR+D     SG      + +TG L       Y + ++  D G      
Sbjct: 652 RI--VKGNEQRRFRLDITVNPSGEGAFLHLVSTGGLDREVTPFYQLLIEVEDKGEPKKFG 709

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ++V+V +   N   P F+Q+ Y  +V E A++ S+V  +  S
Sbjct: 710 YLQVNVTIQDINDNPPSFEQDQYQTSVFEDAAVGSSVLQVAAS 752



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 12/149 (8%)

Query: 39   LTVNLNDINDNAPRL----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D NDN P       ++    I  G     +V   A D D G N E+ Y +    
Sbjct: 1983 VTIWVTDQNDNIPTFMSQNALVAEPNIVIGSILTTVV---AYDPDEGANGEVEYELVE-G 2038

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            ++G   F +D  SG I    +L+     Y++TV ATD G +   +  E++++       P
Sbjct: 2039 DSG--TFIMDRYSGDIRLASQLVPSRLLYTLTVSATDHGMERRTSRTELTIIL-QGLEGP 2095

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRL 182
            VF Q  Y   + EG    + V ++  S L
Sbjct: 2096 VFSQPKYITILKEGQPPGTNVISLDASSL 2124



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKI 73
            +R  V A++      S  + + + + D NDN P   +  P  I     +   A   ++ I
Sbjct: 1854 YRLNVSAKDNGRPPRSSSIPVIIQVRDFNDNPP---IFTPGDIFKSIPENLPASTSVMMI 1910

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A D D  +N ++ YSI      G H F ID  +GVI T  ++       + +TV+ATD
Sbjct: 1911 TAHDTDADINGQLEYSIVQQVPRGNH-FSIDASTGVIYTNQEVDREFSNLFELTVKATD 1968



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            ++      +  +V   +T+ + DINDNAPR   P       +  E    + ++ ATD D 
Sbjct: 3310 IVKVSAHDSGWTVSTDVTIFITDINDNAPRFSRPSYYLDYPELTEVGSLVTQVTATDPDK 3369

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
            GVN +I Y I   S      FR++  +G I
Sbjct: 3370 GVNGKIFYFIRSQS----EYFRMNASTGQI 3395



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 8/112 (7%)

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
            ++ A+D D G +  + Y I+  S      F I+  +G I  TG L     E+ S+ V A 
Sbjct: 3787 EVFASDRDQGDDGVVYYLIFGKSRK--KGFGINRTTGQIYVTGTLDREKEEKISLKVLAK 3844

Query: 130  DTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + G      I EV V   +   N   PVF Q  YDV VSEG S+   V  ++
Sbjct: 3845 NAGSIRGADIDEVFVNITILDAND-PPVFTQELYDVQVSEGLSLGGLVTFVS 3895



 Score = 36.6 bits (83), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 4/162 (2%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEAT 76
            +  +V+A +      +  + L +++ D+NDN+P    +   + I   E    +  K+EAT
Sbjct: 1430 YEVEVLAEDLGVPKHTSSLVLIISVYDVNDNSPVFDQLSYEVTILESEPVNSRFFKVEAT 1489

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSS 136
            D D G N EI Y I   +   +     D +  +     + I  ++Y++ + A D   +  
Sbjct: 1490 DKDSGFNGEIMYDITGGNTADVFGIFPDGQLYIKAELDREIQ-DRYNLVLVAKDRAVEPL 1548

Query: 137  QTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATI 177
               V VSV+    N   P+F    Y  + +E     S V  +
Sbjct: 1549 SASVNVSVLLDDVNDNRPLFNSTNYVFHFAEEQKRGSLVGRV 1590



 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 7/178 (3%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQA 63
            + LDR+  +   +   V A ++  +  +   ++ + L D+ND +P   + P    +Q   
Sbjct: 2683 KQLDREARS--SYSLVVQAADRGSSPRTDQATVNIVLLDVNDCSPVFELSPYTIGVQENL 2740

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
                  I+++ A D+D G N +++Y +   ++ G        +  + +T  +  A  +Y 
Sbjct: 2741 ENLPTNILQVVARDDDQGANGQLSYMLSGGNDEGAFSLSSSGQLSLTQTVDRE-ARSRYV 2799

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + + ATD+G         V+V V   N  +PVF  +++   ++E A   + V  +  S
Sbjct: 2800 LLITATDSGVPPLSGTCTVTVSVSDVNDNAPVFTASSFHTTITEDAPTGTDVLLVNSS 2857


>gi|3253087|dbj|BAA29052.1| Cadherin-related neural recepter 7 [Mus musculus]
          Length = 914

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 190 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 249

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 250 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 308

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 309 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 343



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            ++QV AR+    A    V+L V + D NDNAP L  +P   + AG A  ++V       
Sbjct: 494 LQYQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSELVSRSVGSG 551

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 552 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 600



 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 368 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 424

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 425 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 457


>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2413

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 18/190 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
            +++ + LDR+     + ++ ++ R   G  +S  + L + + DIND++P+          
Sbjct: 1864 LIATKKLDRER----RSKYSLLVRADDGKQSS-DMRLNITVKDINDHSPKFSRATYSFDI 1918

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P    AG     +  I A+D+D GVN E+TYS+          F ++P +GV   T  L 
Sbjct: 1919 PEDTTAGSI---VAAILASDSDSGVNGEVTYSLEEDDED--ETFLLNPVTGVFNVTRVLD 1973

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q  Y +T +A D GG++S   V  +V+   N   PVF+  TY  +VSE     S+V 
Sbjct: 1974 YELQRYYILTARAQDGGGQASTVRVYFNVL-DVNDNPPVFETTTYSASVSESLPAGSSVV 2032

Query: 176  TITVSRLASG 185
            T+  S    G
Sbjct: 2033 TVVASDADDG 2042



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 14/172 (8%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIEA 75
            + +V+AR  Q T     VS+ + + D+NDNAPR   I  ++    ++       I + +A
Sbjct: 839  QLKVVARAGQITGE---VSVNITVKDLNDNAPRF--IHAVEHVSAVENWSTGHTIFQAKA 893

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-G 133
            +D D G N  + YS+   +  GL  F I  + G+I  TG L +    Y + V A D G  
Sbjct: 894  SDPDEGANGVVVYSLKQ-NPRGL--FHIHEKHGLITLTGPLEVTASSYEVEVIAEDMGVP 950

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            K + ++V +  V   N  SPVF Q +Y+V + E   +NS    +  +   SG
Sbjct: 951  KHTSSLVLIVSVYDVNDNSPVFDQLSYEVLIPESEPVNSRFFKVEATDKDSG 1002



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 23/163 (14%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDL------------GVNAE 85
            + L D+NDN P  P   +   I+   G+  + I+++ ATD D             G NA 
Sbjct: 1784 ITLQDVNDNPPVFPNDILDVTIEENVGDGFK-IMQLTATDADELPYVSWLLFPSEGPNAL 1842

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS 143
            +TY+I   ++     FRIDP SG +  T KL      +YS+ V+A D G +SS   + ++
Sbjct: 1843 VTYTIISGAD---DSFRIDPESGDLIATKKLDRERRSKYSLLVRA-DDGKQSSDMRLNIT 1898

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             V   N  SP F + TY  ++ E  +  S VA I  S   SG 
Sbjct: 1899 -VKDINDHSPKFSRATYSFDIPEDTTAGSIVAAILASDSDSGV 1940



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 12/187 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQ 60
           LV S   LDR+  +        I+ + QG    +  + L +N+ D+ND  P         
Sbjct: 509 LVTSAALLDREATSEVVLN---ISAKDQGLQPRISYTKLIINITDVNDQVPTFTQ-STFH 564

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKL 116
           +   E   A  Q++ + ATD DLG N  + +S           +FR+DP SG + T  +L
Sbjct: 565 VSLAEHAPAGTQLLVLSATDGDLGPNGTMRFSFDAETPAAAQGRFRLDPLSGRLSTAVEL 624

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              EQ  Y + VQ TD G    ++  +V+V +   N   PVF    Y  NV E     S 
Sbjct: 625 DREEQASYLLHVQVTDGGSPPLRSAGKVNVTLRDVNDNRPVFYPLQYFANVKENEPSGSY 684

Query: 174 VATITVS 180
           V T++ +
Sbjct: 685 VTTVSAT 691



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 13/164 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K     S  + +T+ + D+NDN P     I  I+I+     
Sbjct: 2180 LDRE--EISNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLT 2237

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               ++++ ATD D G N +I +SI   SNT    FRI   +G+I    +L   A   YS+
Sbjct: 2238 GTDVIQVFATDADEGTNGQIRFSISG-SNT---DFRIYSVTGMISVARQLDREARSSYSL 2293

Query: 125  TVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             VQATD G   +  Q  V + V+   N  +PVF+ + Y V V E
Sbjct: 2294 LVQATDRGSSPRMDQATVNI-VLLDVNDCAPVFELSPYTVRVQE 2336



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +  ++IA +      S    L++++ D NDN+P  P    + +   E  R    +  + A
Sbjct: 1257 YSLKIIAVDGGAEPLSSSCMLSISVLDENDNSPSFPK-SSVSVDVLENMRIGELVASVTA 1315

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD D G NA+ITYSI   +N G   F I P +G I    KL    Q  Y + V A D G 
Sbjct: 1316 TDTDSGPNADITYSITATNNHG--TFSISPNTGSIFLVKKLDYETQSVYKLNVSAKDNGR 1373

Query: 134  KSSQTIVEVSV-VPGPNTRSPVF 155
             S  + + V + V   N   P+F
Sbjct: 1374 PSRSSSIPVIIHVRDFNDNPPIF 1396



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 25/199 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ 60
           +VS   LDR+     +   +V  + +  T   + V++T+   DINDN P     +     
Sbjct: 187 LVSTGGLDREVTPFYQLLIEVEDKGEPKTFGYLQVNVTIQ--DINDNPPSFERDLYQASV 244

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIA 118
           ++       I+++ A+D D   NAEI Y +   +      F+IDP++G  +I+      +
Sbjct: 245 LEDAAVGSSILQVTASDGDEAANAEIRYFLDEET-----PFQIDPKTGTIIIKEGLDYES 299

Query: 119 GEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVSEGA 168
             +YS+T+ A D G     G++  TI  + V    N   PV     F   +   +V E A
Sbjct: 300 RREYSLTIHAVDNGVPSLSGRAEATIKLLDV----NDNDPVVKFRYFPTTSKFASVDENA 355

Query: 169 SINSTVATITVSRLASGCA 187
            + + VA +TVS   S  A
Sbjct: 356 QVGTVVALLTVSDSDSSAA 374



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-VSNT 96
            ++V L D+ND  P         IQ       +V  + A+D+D G N+ + YS++   SN 
Sbjct: 2105 VSVILLDVNDCPPTFTSQKMTYIQENTPVDTVVLAVHASDSDSGPNSYVEYSLHGPFSN- 2163

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS-VVPGPNTRSP 153
               KF I    G +   G+L   E   Y++TV ATD G     + ++V+ VV   N  +P
Sbjct: 2164 ---KFSIGTIDGDVRLVGELDREEISNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTP 2220

Query: 154  VFQQNTYDVNVSE 166
             F QN YD+ + E
Sbjct: 2221 SFSQNIYDIEIEE 2233



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK----------IEATDNDLG 81
           A S   SL + +NDIND+       PPI  Q  E R  I +          + ATD D G
Sbjct: 432 ARSSFASLVIFVNDINDH-------PPI-FQETEYRVDISEDIPKGSYIKGVSATDGDSG 483

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTGGK---- 134
            NA + YS+  VS   L  F I   SG++ T+  L+  E  S   + + A D G +    
Sbjct: 484 QNANLRYSL--VSGNALGWFSISENSGLV-TSAALLDREATSEVVLNISAKDQGLQPRIS 540

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            ++ I+ ++ V   N + P F Q+T+ V+++E A
Sbjct: 541 YTKLIINITDV---NDQVPTFTQSTFHVSLAEHA 571



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSN 95
           V L D+NDN P   +  P+Q  A     +     +  + ATD DLG N  + Y I   + 
Sbjct: 654 VTLRDVNDNRP---VFYPLQYFANVKENEPSGSYVTTVSATDPDLGRNGTVKYMI---TA 707

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT--IVEVSVVPGPNTR 151
                F I+  +G I T   L   E+  Y + V A D  G  S T  IV VSV+   +  
Sbjct: 708 GDAATFHINGNTGKISTLVPLDREEKTTYQLQVTAADGSGLRSHTPAIVTVSVLDTQD-N 766

Query: 152 SPVFQQNTY 160
            PVF Q  Y
Sbjct: 767 PPVFSQKGY 775



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 36  PVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNA--EITYSI 90
           P  + + + DINDN+P  P   ++   +  A   R Q++   ATD D+G N     TY I
Sbjct: 103 PTEVRIVVLDINDNSPVFPDASIVVSFKEDASSGR-QVILDTATDTDIGSNGVDHTTYRI 161

Query: 91  YHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
             V      KFR+D     SG      + +TG L       Y + ++  D G   +   +
Sbjct: 162 --VKGNEQRKFRLDITVNPSGEGAFLHLVSTGGLDREVTPFYQLLIEVEDKGEPKTFGYL 219

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P F+++ Y  +V E A++ S++  +T S
Sbjct: 220 QVNVTIQDINDNPPSFERDLYQASVLEDAAVGSSILQVTAS 260



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 8/153 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVKIEAT 76
            +  +VIA +      +  + L V++ D+NDN+P    +   + I   E    +  K+EAT
Sbjct: 938  YEVEVIAEDMGVPKHTSSLVLIVSVYDVNDNSPVFDQLSYEVLIPESEPVNSRFFKVEAT 997

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D G N EI Y I    NTG   F I P  G +    +L     E+Y++ + A D   +
Sbjct: 998  DKDSGFNGEIVYDIAG-GNTG-DVFGIFP-DGQLYIKAELDREIQERYNLVLVARDRAVE 1054

Query: 135  SSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSE 166
                 V VSV+    N   P+F    Y  +  E
Sbjct: 1055 PLSASVNVSVILDDVNDNRPLFNSTNYVFHFEE 1087



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 12/147 (8%)

Query: 39   LTVNLNDINDNAPRL----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D NDN P       ++    I  G     +V   A D D G N E+ Y +    
Sbjct: 1491 VTIWVTDQNDNIPTFLSQNALVAEPNIMIGSILTTVV---AYDPDEGANGEVEYELVE-G 1546

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            ++G   F +D  SG I    +L+  +  YS+TV ATD G +   +  +++++       P
Sbjct: 1547 DSG--TFIMDRYSGDIRLASQLVPSQLVYSLTVSATDHGTERKTSRTDLTIIL-QGLDGP 1603

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF Q  Y   + EG    + V ++  S
Sbjct: 1604 VFSQPKYITILKEGQPPGTNVISLDAS 1630



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG 64
            K  LDR+     ++   ++AR++     S  V+++V L+D+NDN P       +   +  
Sbjct: 1031 KAELDREIQE--RYNLVLVARDRAVEPLSASVNVSVILDDVNDNRPLFNSTNYVFHFEEE 1088

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
            + R  +V ++ A D D G N+E+ Y+           F ++  +G + +T +        
Sbjct: 1089 QQRGSLVGRVFAEDKDFGPNSEVRYTF----EMPQPNFELNAITGELSSTAQFDRESLMR 1144

Query: 118  --AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                  +S  V ++D G       Q  V+V  +   N   P F ++ Y  +VSE A
Sbjct: 1145 QRGAAVFSFVVVSSDQGLPRPLKDQAKVQV-YIQDINDNQPKFTKDVYQASVSESA 1199


>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
          Length = 4958

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 7/169 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   V+A +      S    + V++ D N+NAPR      + P+    G  +R +  I  
Sbjct: 2960 YSLTVVATDNGKPPLSSRTVIHVSVVDANNNAPRFEQRSYLYPVPENYGIGKRVVQLIAR 3019

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTG 132
             D D GVNAEI+Y + + +N     F ID +SG +     L     G  + + V+A D G
Sbjct: 3020 DDADFGVNAEISYYLVNRANGTTEHFTIDEKSGWVYIQNSLANVPVGTTFLLKVRAIDKG 3079

Query: 133  GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                +  V ++ V+ G N  +P F   ++ V V E   +N+T+ T++ +
Sbjct: 3080 VPPQKDEVSLTLVISGENKHAPTFAAVSHQVRVPENEPVNTTILTVSAT 3128



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 16/181 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           + +K +LDR+    G++R  VIA+++     S   ++T+ L D+NDN+P     R  M  
Sbjct: 605 LTTKVHLDRE--TIGEYRILVIAKDQGTPPQSSTATVTLTLKDVNDNSPVFYPWRYLMAV 662

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +   + K+ A+D D   NA++ YS+    + G   F +D R+G I   G L 
Sbjct: 663 PEDAPPGTS---VGKVMASDADARENAQVRYSL---ESGGEGLFGVDERTGEITLQGSLR 716

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ-QNTYDVNVSEGASINSTV 174
           A  +  Y + + A DTG + +     V ++   +     F   N Y+  ++E      TV
Sbjct: 717 AAHKTLYELNISAKDTGDRFAVRNALVEIIREEDLEHLEFDTYNGYEFRIAEDRGECGTV 776

Query: 175 A 175
           A
Sbjct: 777 A 777



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 37   VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V+LT+ + D+NDNAPR   P        A ++   +   +A D+D G N+ I   +Y + 
Sbjct: 2455 VNLTIFVKDVNDNAPRFSSPRYTAYVPGATKSGDFVFGAKAVDDDDGENSRI---VYRLQ 2511

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPG-----P 148
                 KF ID  SGVI TT +L   E  Y + +QA+D G K      ++ +        P
Sbjct: 2512 GIDAEKFAIDSNSGVIRTTQELANDETTYQLQIQASDCGVKPQSVTADLVIHLWERQLFP 2571

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVAT 176
            + RS +  + T   +V EG  +    AT
Sbjct: 2572 SFRSSITTRFTLPEDVPEGRVVTKLAAT 2599



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 16/159 (10%)

Query: 37   VSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDL-GVNAEITYSI 90
            ++LT+ + D NDNAP           P  +  G    Q+V   ATD D  G N++++Y++
Sbjct: 1819 IALTIQVTDTNDNAPTFQNTAYSFDVPENMPRGSRIGQVV---ATDADADGPNSQLSYTL 1875

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVEVSVVP 146
              +S+     F ++P +GV   T  L     + Y + VQATD G    SS   V  +VV 
Sbjct: 1876 --ISDWANDVFSLNPSTGVFTLTASLDYEQVQHYILVVQATDGGIPALSSTVTVYCNVV- 1932

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N  +P+F+   + V++ E  +I + + ++T   L SG
Sbjct: 1933 DLNDNAPIFEAGPHAVDIVENTTIGTPILSVTAQDLDSG 1971



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 38  SLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHV 93
           S+ + + D+NDN PR P   +   + ++   A  Q V +  A D D  VNA I YS+ H 
Sbjct: 849 SVNITVVDVNDNPPRFPKGEIGDEVFLRENAAVGQEVCLARARDRDASVNARIVYSLTH- 907

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
            N G  +FR+   SG+I     + A  G    + V ATD+G    S+Q  V V+ V   N
Sbjct: 908 -NPG-EQFRVAENSGIIYLDKPIRAAPGTVLHLEVTATDSGNPPLSAQHQVRVT-VEDVN 964

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +PVF+  +Y+ ++ E   +N    ++T +
Sbjct: 965 DHTPVFKLTSYETSLPESTPVNDRFFSLTAT 995



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 75/173 (43%), Gaps = 10/173 (5%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQ--IVKIEA 75
           V AR+           +TVNL D ND+ P +     P+ P        A +   +  I  
Sbjct: 298 VFARDHGSPRQDGRTYVTVNLLDANDHDPEIKFSYFPITPGYATVDENAVKDSIVAAITV 357

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG 133
            DND G N E +  I   +  G  + +      V+   G L   E  +Y++TV ATD G 
Sbjct: 358 IDNDEGSNGETSVEIRAGNELGHFRLQTAATFDVVRVNGGLDREEIPKYNLTVVATDKGT 417

Query: 134 K-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S T   V  V   N   PVFQQ+ Y   +SE + I S VA+I+ +   SG
Sbjct: 418 PPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDADSG 470



 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
           K+   V+A +K     S    L +++ND+ND+ P         +  +       +  I A
Sbjct: 405 KYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISA 464

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG-- 133
           TD D G+NA I Y +   +  G   F ID  +G++ T   L    Q SI +  +   G  
Sbjct: 465 TDADSGLNARIYYELDSGNEQGW--FAIDQDTGLVTTVATLDREVQGSIELHVSARDGGP 522

Query: 134 --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             K + T ++V+++   N  +P F  N   V +SE     S VAT+T
Sbjct: 523 SPKYASTHLKVTIL-DENDEAPRFSLNQIQVTLSENTPPQSLVATLT 568



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 10/145 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P+   +P  +Q+  G A   Q++++  TD D G+N ++ YS+   +
Sbjct: 1167 VKVVIYITDVNDNIPQFQRLPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGN 1226

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPN 149
              G  +F ID  +G I  T +L     + Y +TV A D G +   SS T V + V+   N
Sbjct: 1227 QYG--RFAIDEATGQISLTKELDRETMDSYVLTVVAHDAGLETRLSSSTTVYIEVL-DEN 1283

Query: 150  TRSPVFQQNTYDVNVSEGASINSTV 174
               P+F  +   ++V E    N+ +
Sbjct: 1284 DNVPLFVDDKSRISVLETTPTNTEL 1308



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 76/181 (41%), Gaps = 27/181 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----------IPPIQIQAGEAR 67
            +   V  R+    A    V L VN+ D NDNAP +              PP+ +      
Sbjct: 2645 YEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPVMEAAIYNATVPEEEYPPLFVG----- 2699

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
                K+ A D D G N +++Y   ++ N     F ID  +G I T  KL   E   Y + 
Sbjct: 2700 ----KVSAKDRDSGENGQVSY---YLVNDFTETFVIDSDNGEISTNAKLDREEIASYELI 2752

Query: 126  VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            ++A D G  S + T   +  V   N   P F +  + VNV+E A I + V  IT S L  
Sbjct: 2753 IEARDEGQPSLTGTATVLVTVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSDLDI 2811

Query: 185  G 185
            G
Sbjct: 2812 G 2812



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            ++++ EATDNDLG N+E+ ++I   +      F IDP +G +     L     E+Y++ V
Sbjct: 1307 ELLRFEATDNDLGPNSELAFAI--SAGNRRDTFYIDPLTGTLYLRKPLDYEELEKYTLNV 1364

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +D G    SS T + V V+   N   PVF        + EG  +++ + TIT
Sbjct: 1365 TCSDGGHPRLSSVTTLIVEVIDA-NDNPPVFPNTAIARQIREGILVHTPIVTIT 1417



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 12/187 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV +   LDR+    G     V AR+   +       L V + D ND APR  +   IQ+
Sbjct: 496 LVTTVATLDREVQ--GSIELHVSARDGGPSPKYASTHLKVTILDENDEAPRFSL-NQIQV 552

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKL- 116
              E    +  +  + A DND G N  + YS +  V+      F +D  +G + T   L 
Sbjct: 553 TLSENTPPQSLVATLTAVDNDQGTNGSVAYSFHSSVARDYPKTFALDGLTGQLTTKVHLD 612

Query: 117 --IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
               GE Y I V A D G     +   V++ +   N  SPVF    Y + V E A   ++
Sbjct: 613 RETIGE-YRILVIAKDQGTPPQSSTATVTLTLKDVNDNSPVFYPWRYLMAVPEDAPPGTS 671

Query: 174 VATITVS 180
           V  +  S
Sbjct: 672 VGKVMAS 678



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 12/155 (7%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEI 86
            G   S  V +TV L D+ND +P    I P +I   E   +   ++ I+A D D G N  +
Sbjct: 2025 GLPLSSTVQVTVVLLDVNDMSPEF--ISPTKISIIENAPSNTVVMAIKAVDRDEGRNGYV 2082

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
             YS+    +T L  F + P  G++  +G L       Y++ V A D G     +   V+V
Sbjct: 2083 EYSL---EDTTL-PFTVGPVDGLLRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTTVTV 2138

Query: 145  VP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                 N  SPVF    Y   V+E ASI ++V  ++
Sbjct: 2139 TVLDENDNSPVFDPRQYSATVAENASIGASVLQVS 2173



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  +F   V++ +      + P+ + + + DINDN P  P    I +   E+  
Sbjct: 59  LDREALSSDRFDLVVLSSQ-----PTYPIEVRILVLDINDNDPEFPE-SSIAVSFSESAV 112

Query: 68  --RQIVKIEATDNDLGVNAEIT-YSIYHVSNTGLHKFRID----PRSGV----IETTGKL 116
              +++   ATD D   N  +  Y I   +  G  KFR++    P        +ETTGKL
Sbjct: 113 VGTKLLLDAATDKDTLENGVVDDYFIVDGNTDG--KFRLEVTGNPTGETTYLHLETTGKL 170

Query: 117 IAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                E YS+ V A D G   +    +V V+V+   N   P+FQQ+ Y V ++E A I +
Sbjct: 171 DREQVEFYSLNVCARDRGQPPRLGYLLVNVTVL-DVNDNPPIFQQSDYVVALNESAPIGT 229

Query: 173 TVATI 177
            V T+
Sbjct: 230 KVLTV 234



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 19/192 (9%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG 64
            K  LDR+  +   +  +V A ++   + S  V + V++ D NDNAP       +  ++  
Sbjct: 1029 KNVLDREEQD--YYALEVTATDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFVLHLREN 1086

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT----GKLI-- 117
            E     V K+ ATD D+G NA++ +S+          F +DPR+G I++      +L+  
Sbjct: 1087 EPPDTFVGKLLATDRDVGRNADLVFSL----PASQQDFTVDPRNGFIKSLRVFDRELLVT 1142

Query: 118  -AGEQYSITVQA--TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              G  Y +T++A  TD G    +  V+V + +   N   P FQ+  Y V V+EGA+I + 
Sbjct: 1143 NTGSSY-VTLEATVTDNGVNRLRDRVKVVIYITDVNDNIPQFQRLPYRVQVNEGAAIGTQ 1201

Query: 174  VATITVSRLASG 185
            +  +  +    G
Sbjct: 1202 LLRVYTTDADEG 1213



 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + AR++   + +   ++ V + D NDN P+   +  + + +  E  
Sbjct: 2741 LDRE--EIASYELIIEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRLFSVNVTENAEIG 2798

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              +++I ++D D+G NA ++Y      N G  KF +D  SG +   G L   EQ  Y + 
Sbjct: 2799 TFVIRITSSDLDIGQNANVSYRF--TENPG-QKFAMDALSGNVTVNGHLDREEQDEYLLK 2855

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + A D G   + T + ++ +   N   P F + +Y  +  E
Sbjct: 2856 LVAAD-GAWQAATALTIT-IQDQNDNPPEFDEESYHFHFPE 2894



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++  +N+  P+   P+      ++ E    +  ++ATD D G +  + Y     SN
Sbjct: 3260 TVLVHVTGVNEYYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDSGEDGRVYYLFVGSSN 3319

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG----KSSQTIVEVSVVPGPN 149
                 F I   +G+I  + +L    Q  +  TV   + GG     + +  V VS+  G +
Sbjct: 3320 D--RGFSIGSETGIIRVSRRLDRETQNRVVLTVMTKNGGGIRGNDTDEAQVIVSIQDGND 3377

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F Q TYD  VSEGA   + V T+
Sbjct: 3378 --PPEFLQTTYDATVSEGAVHGTRVLTV 3403


>gi|307174406|gb|EFN64925.1| Neural-cadherin [Camponotus floridanus]
          Length = 1686

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 203 LDRDQPNGRAQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 262

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D    G NA++ YSI        TG   F I+P +GVI+T    +  
Sbjct: 263 AGMVVMTMTAVDYDDPNEGTNAKLMYSIEKNVIEEETGSPIFEIEPETGVIKTAVCCLDR 322

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
           E+   YSI V A D GG        +  V   N   P F +  +  +V+ +EG  +    
Sbjct: 323 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPAFTKEEWFTEVDETEGPDLPEMP 381

Query: 174 VATITV 179
           + T+TV
Sbjct: 382 ILTVTV 387


>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
 gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
          Length = 4610

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 23/188 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E+LDR+          +IA++  G      V+  V L DINDNAP        Q +
Sbjct: 2545 IFTLESLDRENALEKVIPISLIAKDGGGKVGFCTVN--VILTDINDNAP--------QFR 2594

Query: 63   AGEAR----------RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            A + R            I+KI A+D D G NA+ITYSI   ++     F I   SGVI T
Sbjct: 2595 AADYRVNVASDVPRGTTILKIAASDMDEGSNADITYSIETDADNVEGNFEIHQFSGVIVT 2654

Query: 113  TGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
               LI  E   Y+  V+A D G  +  ++V V V +  P    P F ++ Y   + E  S
Sbjct: 2655 KESLIGLENQLYTFLVRAKDGGNPTKSSVVPVYVKILAPEVPVPKFIESHYRFAIEEDLS 2714

Query: 170  INSTVATI 177
            + S +  I
Sbjct: 2715 LGSEIDVI 2722



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 9/145 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L+V++ DINDN P           A +     Q++++ A   D     EITY+I + +  
Sbjct: 3214 LSVSILDINDNPPVFERREYTATVAEDIPVGTQVLRVHAASRDTEAGTEITYAIINGNER 3273

Query: 97   GLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
            G   FR+DP++G   VIE      A E Y +TV+ATD G  S   +  V++ +   N  S
Sbjct: 3274 G--AFRVDPQTGGVFVIEPLDYETAHEFY-LTVEATDGGTPSLSDLATVNINLTDVNDNS 3330

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF Q+ Y   +SE A +  TV T+
Sbjct: 3331 PVFNQDIYSAVISEDAELGKTVLTV 3355



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 21/193 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLP 54
            + V  ++ LDR+  +   +   + A +   TA +V   + V + D +DN+P       + 
Sbjct: 2974 WKVSVRKPLDREEKD--NYLLNITATDGTFTAKAV---VEVKVLDASDNSPICEKSFYME 3028

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P    +   A R I+++ ATD D+  NA+I+Y +      G   F ID  +G ++T  
Sbjct: 3029 SVP----EDSPAGRLILQVSATDADIRSNAQISYELL---GPGSEHFSIDSETGELKTLL 3081

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   E+  + + V+A D GG+  +  VE++ V   N   P F  + Y   V E   IN+
Sbjct: 3082 PLDREEEEVHKMKVRALDGGGRFCEAEVEIT-VEDVNDNPPQFTTDPYTFTVFENTEINT 3140

Query: 173  TVATITVSRLASG 185
             VA +  S L +G
Sbjct: 3141 PVARLYASDLDTG 3153



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 15/176 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEA 66
            LDR+     K +  V A +  G      V +TV   D+NDN P+    P      +  E 
Sbjct: 3083 LDREEEEVHKMK--VRALDGGGRFCEAEVEITVE--DVNDNPPQFTTDPYTFTVFENTEI 3138

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               + ++ A+D D G NAEI YS+   S  G+  F I+  +GV+     L    Q  Y++
Sbjct: 3139 NTPVARLYASDLDTGANAEIMYSLLD-SADGV--FSIEEETGVVRLDRPLDRELQSLYTL 3195

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              QATD G     SSQT++ VS++   N   PVF++  Y   V+E   + + V  +
Sbjct: 3196 RAQATDRGSPRHLSSQTLLSVSIL-DINDNPPVFERREYTATVAEDIPVGTQVLRV 3250



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 15/161 (9%)

Query: 32   AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            A S  V + V + D NDN+P         +LP+    + +    R  + ++ A+D D G 
Sbjct: 1221 AKSTTVRVIVKVLDENDNSPQFMEKVYKIKLPVREKPEKERALKRDPVYRVIASDKDEGP 1280

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIV 140
            NAEI+YSI      G  KF I+P++G++ +     A +   +T++A D G   KS+   +
Sbjct: 1281 NAEISYSIEEGDEQG--KFFIEPKTGMVYSKKASSAVDYDILTIKAVDNGRPQKSATCRL 1338

Query: 141  EVSVVPG--PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             +  +P   P+T   VF +  Y  +V E  +++  +  I++
Sbjct: 1339 HIEWIPKPEPSTVPLVFDEPFYTFSVMESDTVSHMLGVISL 1379



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + L D+NDN P     +      +A      ++++ ATD D G N  + Y
Sbjct: 2258 TGAKAEVFVDIILEDVNDNPPVFHTKLYNASLSEASVIGTSVLEVSATDADTGNNKVLFY 2317

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSV 144
             I    +     F ID  +G I TT  L   E+  + + ++A D G    SS+ +V + V
Sbjct: 2318 QIVEDKDKSFDYFSIDRDTGTIWTTRMLDHEEKPSHRLLIRAVDGGVPALSSEVMVLIDV 2377

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
            +   N  +PVF QN Y+  VSE A
Sbjct: 2378 M-DLNDNTPVFSQNVYEATVSELA 2400



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 21/190 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS---LTVNLNDINDNAPRLPMIPP 58
            +V  K+ LDR+   P  F  ++ AR+ Q TA    VS   L + L D+NDN P+   IPP
Sbjct: 873  IVTVKKPLDREV-QP-VFVLKIAARD-QATAEPQLVSTVLLKITLEDVNDNPPKF--IPP 927

Query: 59   -IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
               ++  E       I+ +EA D D+G ++++ YS+    ++G  KF +D  SG +    
Sbjct: 928  NYHVRVREDLPIGTVIMWLEAHDPDVGPSSQVRYSLI---DSGDGKFEVDKLSGAVRIVQ 984

Query: 115  KLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGA 168
             L   ++  YS+T +A D G     SS   +EV VV    N   P+F        + E  
Sbjct: 985  NLDYEKKQVYSLTAKAKDKGKPISLSSSCHIEVEVVDVNENLYRPLFPSFVDKGFIKEDV 1044

Query: 169  SINSTVATIT 178
             I ++V  IT
Sbjct: 1045 PIGTSVMKIT 1054



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + VN+ D NDNAP     P +    ++      ++++ A D D G NAEI YSI   S
Sbjct: 1543 VRVIVNVQDTNDNAPWFSGAPYVGRVFESAATGSAVLQVSALDKDKGQNAEIIYSIE--S 1600

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
                + F IDP  G I    +L    +  + +TV+A+D G    S    V+++V    N 
Sbjct: 1601 GNVANSFAIDPVLGTITVAKELDRNNKNRFELTVKASDKGTPPLSGTAAVDITVTISDNA 1660

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              P F +  +   VSE     + V+ +T +  +S
Sbjct: 1661 -IPKFAEKEFSAEVSETVLPGAFVSLVTANSQSS 1693



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 15/172 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            +F   V A +    + S   ++ +NL D+NDN+P     +   +  +  E  + ++ + A
Sbjct: 3298 EFYLTVEATDGGTPSLSDLATVNINLTDVNDNSPVFNQDIYSAVISEDAELGKTVLTVMA 3357

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
             D D   + ++ +SI    N G   F IDP  G ++   +L+  E+   Y++TV A+D G
Sbjct: 3358 DDADGPSSNQVRFSIID-GNQG-SPFTIDPVRGEVKV-ARLLDREKTSGYTLTVLASDNG 3414

Query: 133  G---KSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G    SS TI V+VS +   N   P+F Q  Y + + E   I ++V  +TVS
Sbjct: 3415 GPARSSSATINVDVSDI---NDNPPIFSQANYSIIIQENQPIGASVLQLTVS 3463



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V A ++     S  V + + + D+NDNAP+   P+  P  +++      I++IEA 
Sbjct: 1102 YWLTVYATDRGVVPLSSFVEVYIEVQDVNDNAPQTSEPVYYPSVMESSPKDVSIIQIEAF 1161

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG 133
            D D   + +++Y I   +  G   F I+ ++G++ TT + +  EQ   + + +  +D G 
Sbjct: 1162 DPDTKSSEKLSYKITSGNPQGF--FSINQKTGLVTTTSRKLDREQQDEHILEITVSDQGV 1219

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
             +  T V V V V   N  SP F +  Y + +
Sbjct: 1220 PAKSTTVRVIVKVLDENDNSPQFMEKVYKIKL 1251



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 26/155 (16%)

Query: 22   QVIAREKQGTAASVPVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQI----- 70
            QV +   +      P+SL+      V + D+N+N  R P+ P   +  G  +  +     
Sbjct: 992  QVYSLTAKAKDKGKPISLSSSCHIEVEVVDVNENLYR-PLFPSF-VDKGFIKEDVPIGTS 1049

Query: 71   -VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
             +KI A D D G + EI YSI     +GL  F ID  +GVI T  +L+  E    Y +TV
Sbjct: 1050 VMKITAQDEDKGRDGEIRYSIR--DGSGLGIFTIDEDTGVIRTQ-ELLDHETVPHYWLTV 1106

Query: 127  QATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
             ATD G     + VEV +         P T  PV+
Sbjct: 1107 YATDRGVVPLSSFVEVYIEVQDVNDNAPQTSEPVY 1141



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEAT 76
           +   V A EK   A +    + + + D ND  P   P    I +    A R  + K+ AT
Sbjct: 114 YILTVKAMEKNSNAEA-RTRVRIQVLDTNDLRPLFSPTAYSISLPENTAIRTSVAKVMAT 172

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           D D+G N E  YS    ++     F + P SGV+  TGKL   E  QY + + A D G K
Sbjct: 173 DADIGTNGEYYYSFREWTDM----FSVHPTSGVVTLTGKLDYSETKQYELEILAVDRGMK 228



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 18/168 (10%)

Query: 19   FRFQV------IAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQI 70
            FRF V      I R     AA+V    T+ + D+ND  P+    +     +       ++
Sbjct: 1840 FRFSVQVHDMGIPRHFAEKAANV----TIEILDVNDCPPQFSQDLYETTVLVPTYKGVEV 1895

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
            + + A+D D G N+ + YSI    N G  KF++DP +GVI           Y + V+ +D
Sbjct: 1896 ITVNASDADSGPNSRLFYSIVE-GNIG-EKFKMDPVTGVITIQNVTQLRSWYELRVRVSD 1953

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATI 177
             G  S  ++V+++V    N  S + F Q +Y   V E  S   T+A I
Sbjct: 1954 -GRFSKTSLVKINV--RENKESTLRFTQESYKAFVPENFSEKKTLAVI 1998



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 15/175 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+         +V   +K   AA V V  TV + D+NDN P    LP     Q+ A +
Sbjct: 2036 FDREEQGVFDIVVEVTRDDKSPDAAHVLV--TVIVEDVNDNPPVFVNLPYQALAQVDA-D 2092

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
                I K+ A D D+  NAEI Y +       L++F      G I  T KL       ++
Sbjct: 2093 VDHIITKVTAVDADINENAEINYHLQE-----LNEFVQISTDGEISLTKKLDKDSVNTEF 2147

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ITV A D G  +  + VEV ++   N   PVF++  Y   + E   + + +  I
Sbjct: 2148 IITVVARDGGEPALSSSVEVPIMV-VNKAMPVFEKAFYSPEIPENIQLLTPIVHI 2201



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 10/152 (6%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
            SV   + + + D N++ P+    P  ++   E      ++++I ATD D     ++TY++
Sbjct: 1434 SVSTQVLIKVIDTNNHRPQFSK-PKYEVDVSEDTPPETEVLRISATDQD--EKNKLTYTL 1490

Query: 91   YHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
               ++   L KFR+DP +GV+ T  +L      Q+++TV   D      + +V V V V 
Sbjct: 1491 LSSTDPFSLRKFRLDPGTGVLYTAERLDHETMHQHTLTVMVRDQDIPVKRNLVRVIVNVQ 1550

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N  +P F    Y   V E A+  S V  ++
Sbjct: 1551 DTNDNAPWFSGAPYVGRVFESAATGSAVLQVS 1582



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 9/139 (6%)

Query: 42  NLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           + + +N  AP+     P  I+  E      +IV + A+D+D G N ++ Y I        
Sbjct: 703 DFHSVNRVAPQFADTFPSVIEVKEDLPVGARIVHLSASDSDSGFNGKLVYVI--SGGDAE 760

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVF 155
            +F ID  SG ++    L     + Y++ +   D    KSS  +++V ++   N   P F
Sbjct: 761 SRFIIDMDSGWLKVFAPLDRETTDHYTLNITVYDLVPQKSSSRLLDVKILDA-NDNGPQF 819

Query: 156 QQNTYDVNVSEGASINSTV 174
            + TY V +SE +++ + V
Sbjct: 820 LKETYSVEISESSTVGTEV 838



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNA 84
            E +G+     V +++ + D+NDN P     P     ++       +++++ATD D G N 
Sbjct: 2780 EYEGSKVVSAVDISIQVKDVNDNRPLFESNPYEAFVVENLPGGTCVIQVKATDLDSGTNG 2839

Query: 85   EITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
             + Y++     T   +  F I+  SG I T  +L      +Y+++V ATD G K
Sbjct: 2840 HVVYNLDPNQETRDIVELFAINSESGWITTLKELDRETRNKYTVSVLATDRGDK 2893



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 20/154 (12%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
           LTV ++  N++ P   +I  + + A E  +     +V +E  DND G N EI  S+  V+
Sbjct: 241 LTVRVDQANEHTP---VITAVTLAASETDKDPTYAVVTVE--DNDQGANGEIA-SLSVVA 294

Query: 95  NTGLHKFRI-----DPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVP 146
              L +FR        +   I+   ++    Q   Y++T+QA D G     +  +V  V 
Sbjct: 295 GDPLQQFRAMRTSPGSKEYQIKAVKQVDWDSQPFGYNLTLQAKDKGTPPQFSSAKVIHVM 354

Query: 147 GPNTR--SPVFQQNTYDVNVSEGASINSTVATIT 178
            P+ +   P F Q  Y VNVSE A +++ V  +T
Sbjct: 355 SPHFKVGPPKFIQAIYRVNVSEFAPLHTPVVMVT 388



 Score = 39.7 bits (91), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 21/182 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK-----QGTAASVPVSLTVNLNDINDNAPRLPMI 56
            + V+KE LDR+  N  +F   V A +K      GTAA   V +TV    I+DNA  +P  
Sbjct: 1616 ITVAKE-LDRN--NKNRFELTVKASDKGTPPLSGTAA---VDITVT---ISDNA--IPKF 1664

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  A  +   +     +       + + Y I   +  G   F I+P SGV+ T   L
Sbjct: 1665 AEKEFSAEVSETVLPGAFVSLVTANSQSSVFYQIKDGNVNG--AFDINPNSGVVVTHSVL 1722

Query: 117  IAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                   Y +T+Q T+  G +S T + + +    N  +PVF Q+ +   VSE + +NS V
Sbjct: 1723 DYETIPSYKLTIQGTNMAGLASNTTLLIHL-KDENDNAPVFIQDQFAGMVSESSPVNSVV 1781

Query: 175  AT 176
             T
Sbjct: 1782 LT 1783



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 19/170 (11%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           K+  +V+  +K+     +     +++ D+N+N P        +    E       ++ ++
Sbjct: 431 KYELEVVTSDKKAVTKVI-----IDVIDVNNNGPEFKQTS-YKASLDENMPTGTSVLTVK 484

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDT 131
           ATD D G N  +TYSI   +N     F ID  SGVI   ET    +    Y++ V+A+  
Sbjct: 485 ATDLDSGENGYVTYSI---ANVNSQPFVIDYFSGVISSSETLDYELMPRIYTLKVRASGW 541

Query: 132 GG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           G    +  +T V + ++   N   P+F+    D  V     +   + T++
Sbjct: 542 GSPYRREVETQVTI-MLNNLNDNKPLFENVDCDATVPRDHGVGDQITTVS 590



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDN P+ L     ++I ++     +++++EA D DLG N  + YSI   ++ 
Sbjct: 805 LDVKILDANDNGPQFLKETYSVEISESSTVGTEVIQVEAKDKDLGDNGVVRYSILADTD- 863

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNTR 151
              +F ID  +G++     L    Q  + + + A D      Q +  V +   +   N  
Sbjct: 864 ---QFAIDTETGIVTVKKPLDREVQPVFVLKIAARDQATAEPQLVSTVLLKITLEDVNDN 920

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
            P F    Y V V E   I + +  +
Sbjct: 921 PPKFIPPNYHVRVREDLPIGTVIMWL 946



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 20/187 (10%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAAS----VPVSLTVNLNDINDNAPRLPMIPP-IQI 61
            + LD+D  N  +F   V+AR+    A S    VP+ +      + + A   P IP  IQ+
Sbjct: 2136 KKLDKDSVN-TEFIITVVARDGGEPALSSSVEVPIMVVNKAMPVFEKAFYSPEIPENIQL 2194

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                    IV I+A D++ G          H     L++F I+  +GVI+    L     
Sbjct: 2195 LT-----PIVHIQANDSE-GPRMFTD----HRRGDPLNQFTINFNTGVIQVVKTLDFETH 2244

Query: 122  --YSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              Y ++V+ATD+  G  ++  V++ ++   N   PVF    Y+ ++SE + I ++V  ++
Sbjct: 2245 PAYKLSVRATDSLTGAKAEVFVDI-ILEDVNDNPPVFHTKLYNASLSEASVIGTSVLEVS 2303

Query: 179  VSRLASG 185
             +   +G
Sbjct: 2304 ATDADTG 2310



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV--IETTGKLIAGEQY-SITV 126
            + + +ATD+D G    +TY I  V++    KF I     +  +E+  +  A E+   I++
Sbjct: 2508 VAEAQATDDDSGTYGRLTYHI--VNDIAKDKFSISENGEIFTLESLDRENALEKVIPISL 2565

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             A D GGK     V V ++   N  +P F+   Y VNV+      +T+  I  S +  G
Sbjct: 2566 IAKDGGGKVGFCTVNV-ILTDINDNAPQFRAADYRVNVASDVPRGTTILKIAASDMDEG 2623


>gi|348519324|ref|XP_003447181.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
          Length = 2850

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F  QV A+       +    + VN+ D+NDN P     +      +  +    ++++ A 
Sbjct: 994  FSLQVRAQNVAAVPLAAFTRVYVNITDVNDNVPFFTSSIYEASVTEGAQIGTSVLQVSAH 1053

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-- 132
            D DLG+N EITYS+   S+   + FRID   G+I T       A   Y + VQ+ D    
Sbjct: 1054 DKDLGLNGEITYSLLSDSSGDHNLFRIDSELGIIYTEAVFDREARSSYLLEVQSEDGQES 1113

Query: 133  ---GKSSQTIVEVSVV----PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               GK+ Q   + + V       N   PVF Q  Y+V V E A +   V T++
Sbjct: 1114 ARPGKNKQPNTDTAYVRVFISDVNDNKPVFAQRLYEVGVDENADVGLAVVTVS 1166



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 13/172 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLT----VNLNDINDNAPRLPMIPPIQIQAGEARRQ---- 69
           ++   V A +   +    P+S T    V ++D+N+N P        + QA     Q    
Sbjct: 668 EYVLNVTATDDNASGGPHPLSSTARVIVGVDDVNNNKPIFEECQQYREQASVLENQPTGT 727

Query: 70  -IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            ++++ A D D G N ++ Y + H  ++ +  FRI P +GVI T  +     Q  YSITV
Sbjct: 728 FVLQVHAVDADEGANGKVKYGLMH-RDSAMPAFRIHPDTGVIVTARRFDRERQREYSITV 786

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD   +    I ++++ +   N  SP F+   Y+  + E   + ++   +
Sbjct: 787 TATDWAEEPLIGICQLTIQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRV 838



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)

Query: 41  VNLNDINDNAPRLPM--IPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNT 96
           + + D+NDN P   M   P + + + EA     + +++A D D G + E+ Y    +S+ 
Sbjct: 284 LKITDVNDNVPEWNMKPYPYLAVVSPEAPAGTFVYQLQAHDGDEGKSGEVEY---FLSDG 340

Query: 97  GLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
           G   F +D ++G + TTG ++  E +Y ++V A D  G  S   + +SVV G   R+P F
Sbjct: 341 GDGCFAVDKKTGQVVTTGLVLQREREYLLSVVALDGMGSRSAPAM-LSVVAG--ARAPQF 397

Query: 156 QQNTYDVNVSE 166
              +Y +++ E
Sbjct: 398 TNTSYAISIPE 408



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 15/176 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + ++  LDR+      +RF V+A +++G   +    + +N+ DINDNAP     P     
Sbjct: 1304 MYAQRTLDRE--ERAVWRFVVMATDEEGEGLTGFTDVIINVWDINDNAPTFSCAPDNCHS 1361

Query: 63   A-------GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETT 113
            +       G    +++ ++  D  +G NA +TY I   S     +  F ID  +G I   
Sbjct: 1362 SVAENSPPGTLVVEMMAVDLDDAAVGQNAILTYKITENSQNADSVDLFIIDSSTGTISVA 1421

Query: 114  GKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             + +  E+   + + V+A D GG +    V + VV   N   P F+++     V E
Sbjct: 1422 AEGLDRERADTHHVVVEARDGGGMTGTATVTI-VVTDINDHVPKFREDWCGARVPE 1476



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 41   VNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN P     +  + + +  +    +V + A D D G NA++ Y I   +  G+
Sbjct: 1131 VFISDVNDNKPVFAQRLYEVGVDENADVGLAVVTVSANDEDEGANAKLRYQITSGNKGGV 1190

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              F I+P  G I     L   +Q  Y + + A+D  GK       V  V   N  +PVF 
Sbjct: 1191 --FDIEPEVGTIFIAQPLDYEQQKRYKLLILASD--GKWEDYAAVVVTVVNKNDEAPVFS 1246

Query: 157  QNTYDVNVSE 166
             N Y  +V+E
Sbjct: 1247 MNEYYGSVTE 1256



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 32/195 (16%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-------IPPIQIQAGEARRQI 70
           ++   V A E+ G+  S    + V + D ND  P           IP     A      +
Sbjct: 464 RYLLMVRASEEPGSL-STATEVQVLITDENDCVPEFLQSIYSVDGIPETVTTA----TSL 518

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITV 126
           +++ ATD D G+NAE+TY  Y +S      F I P   V     + +  E+    Y   V
Sbjct: 519 LQVLATDCDSGLNAELTY--YTLSP----DFSISPHGTVF--PARRLDYERPNHLYEFVV 570

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A D+G +       V V +   N  +P F Q  Y   VSE A  N+ VAT+ +++   G
Sbjct: 571 MAVDSGDEPHSGTATVRVRMANVNDEAPEFSQPVYRTFVSEDAGPNTLVATV-LAKDPDG 629

Query: 186 CAIM------NKEEN 194
             I+      N+EEN
Sbjct: 630 DGIIYSITAGNEEEN 644



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 16/135 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIPPIQI 61
            K+ LD +   PG+ RF +  +  + T  S  +   V + D NDNAP       ++ P+  
Sbjct: 1529 KKKLDFE--QPGEQRFNLTIK-VEDTDFSSHIHCLVLVEDENDNAPVFTPGSYLLSPLPE 1585

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----I 117
               E    ++++ A+D+D G N +I+YSI   S+   H F +   +GV+     L    +
Sbjct: 1586 DVTEGT-SVIQVVASDSDSGPNGDISYSILPESDPYGH-FAVSG-AGVVTVARPLDRETV 1642

Query: 118  AGEQYSITVQATDTG 132
            AG  Y + V ATD G
Sbjct: 1643 AG--YELVVMATDRG 1655



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 25/169 (14%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVS 94
           S+ V++ D ND+ P       I I   +    R  + ++EA D D G NAE+TY    V 
Sbjct: 62  SVKVDVLDTNDHEPTFRSADNIHISLHDTTALRSVVYRLEAVDADSGKNAELTY--ISVP 119

Query: 95  NTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKS-SQTIVEVSVVP------ 146
             G   F + P++G +     ++    +    V A D G    +   V V+V P      
Sbjct: 120 QNG--SFYVVPKTGEVLLVDSILGLPSKVKFCVYARDHGWPPLTSKAVLVTVAPQRWATR 177

Query: 147 ----------GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                     G + R+ +       +NVSE ASI S + +++ +R  S 
Sbjct: 178 PAELAGSARAGRSPRALLDPGTVVSLNVSEDASIGSVITSLSPTRFQSA 226



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 6/141 (4%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LT+ + D NDN+P+   +        +       +++ A D+D G NA ITY++   S  
Sbjct: 802 LTIQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAAHDDDFGTNAAITYAM---SLE 858

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
                +++P +G +     +      +  + ATD G +S+   + V++    N + P ++
Sbjct: 859 QPEYLQVNPITGWVYVNQPISQRTYITRDIIATDGGNRSTSVELAVTITNVKN-QPPQWE 917

Query: 157 QNTYDVNVSEGASINSTVATI 177
           +  Y V + E  + ++ + T+
Sbjct: 918 KENYSVVIPENTARDTPIVTV 938


>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
          Length = 4588

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVIAVRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-YEVN 2604

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI  
Sbjct: 2605 IGSSAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G  S +++V V V   P+  + P F +  Y   VSE   I + +  
Sbjct: 2665 ENEFFTFFVRAVDNGSPSKESVVPVYVKILPSEMQLPKFSEPFYTYTVSEDMPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P              I  G    +I+++ A   D+  NAEITYSI  
Sbjct: 3215 TVIVSVLDINDNPPVFEYREYGTTVSEDILTG---TEILQVYAASRDIEANAEITYSI-- 3269

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID ++G I     L   +  +Y +TV+ATD G  S   +  V++ V   N
Sbjct: 3270 ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTPSLSDVAAVNINVTDIN 3329

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   VSE A +  +V T+
Sbjct: 3330 DNTPVFSQDTYTAVVSEDAVLEQSVITV 3357



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 15/154 (9%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D NDN P         RLP     + +    R  I ++ ATD D G NAEI+YS
Sbjct: 1231 IIVKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPIYRVIATDKDEGPNAEISYS 1290

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV-- 145
            I   +  G  KF I+P++G++ +     AGE   ++++A D G   KSS T + +  +  
Sbjct: 1291 IEDGNEHG--KFFIEPKTGLVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISK 1348

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P P+     F+++ +   V E   +   +  I+V
Sbjct: 1349 PKPSLEPIAFEESFFTFTVMESDPVAHMIGVISV 1382



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP          + I+++ ATD D+  NAEITY++   S  G  KF+++P +G ++T  
Sbjct: 3031 TIPEDSFPG----KLIMQVSATDADIRSNAEITYTL---SGPGAEKFKLNPDTGELKTLA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  + ++ +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQAIYNLLVKATDGGGRFCQANIMLT-LEDVNDNAPEFSADPYTITVFE 3136



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN PR   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 911  VLLKVSLEDVNDNPPRF--IPPNYRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLL- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 968  --DHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF        V E   I S+V T++     +G
Sbjct: 1026 NENLNPPVFSSFVEKGIVKEDVPIGSSVMTVSAHDEDTG 1064



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S    + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1148 VMENSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     T+  + V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTVARIIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 7/145 (4%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDRGKNAEVVYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V V V   +  SP
Sbjct: 1607 G-NSFTIDPILGSIKTAKELDRSSQVEYDLMVKATDKGNPPMSEITSVHVFVTIADNASP 1665

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F    Y   +SE     S V  +T
Sbjct: 1666 KFTSKEYSFEISETVGTGSFVGMVT 1690



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 11/153 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YNLLVKATDGGGRFCQANIMLTLEDVNDNAPEFSADPYTITVFENTEPGTPLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G    
Sbjct: 3153 DAGLNRKISYSLI---NSADGQFSINELSGIIQLEKPLDRELQSVYTLTLKAVDQGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             T    V VSV+   N   PVF+   Y   VSE
Sbjct: 3210 LTATGTVIVSVL-DINDNPPVFEYREYGTTVSE 3241



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ +N+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVAAVNINVTDINDNTPVFSQDTYTAVVSEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G +  T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SPFTIDPARGEVRVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++T+QA+D G         V++ V   N  +P+F +  Y V + E   +  +V  + V+
Sbjct: 3406 YTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPIFSRGNYSVIIQENKPVGFSVLQLVVT 3465



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 18/161 (11%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEARRQIV 71
            ++F ++AR   +     ASV VS+ V   D NDN+P L   P     ++ Q G +R  ++
Sbjct: 2774 YQFSILARCTHDDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENQPGGSR--VI 2829

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            +I A+D D G N ++ YS+    +   +  F I+  +G I T  +L     + Y I V A
Sbjct: 2830 QIRASDLDSGTNGQVMYSLDQSQSVEVIESFSINMETGWITTLKELDHERRDNYQIKVVA 2889

Query: 129  TDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G K   SS  IV V+V    N   P F    Y   VSE
Sbjct: 2890 SDYGEKVQLSSTAIVAVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V + V + D+NDN       PP+ +Q         A      ++++ ATD+D  
Sbjct: 2261 TGAHAEVFVDVIVEDVNDN-------PPVFVQQSYVATLSEASVIGTSVIQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +GVI     L     +Q+ I V+A D G    SS 
Sbjct: 2314 PNRGISYHMFGNHSKSHDHFHIDGSTGVISLVRTLDYEQFQQHRIFVRAVDGGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             IV V V    N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VIVTVDVT-DLNDNPPLFDQQLYEAKISEHATHGHFVTCV 2412



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     +   +I         V  ++A D D     ++ YSI  +S
Sbjct: 2374 VIVTVDVTDLNDNPPLFDQQLYEAKISEHATHGHFVTCVKAHDADSSDIDKLEYSI--LS 2431

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ +  +D   +SS   V V+V+ G N  S
Sbjct: 2432 GNDHKNFAIDSETGIITLSNLRRHTLKPFYSLNISVSDGVFRSSAQ-VRVAVIGG-NLHS 2489

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+  ++E A +++ V  +  +   SG
Sbjct: 2490 PVFLQNEYEAELAENAPLHTLVIEVKATDGDSG 2522



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQI------VKIEATDNDL 80
            PVSL+      V + D+N+N     + PP+    ++ G  +  +      + + A D D 
Sbjct: 1009 PVSLSSTCYVEVEVIDVNEN-----LNPPVFSSFVEKGIVKEDVPIGSSVMTVSAHDEDT 1063

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----GK 134
            G + E+ YSI   S  G+  F+ID  +GVIET+ +L   +   Y +TV ATD G      
Sbjct: 1064 GRDGEVRYSIRDGSGVGV--FKIDEETGVIETSDRLDRESTSHYWLTVYATDQGVVPLSS 1121

Query: 135  SSQTIVEVSVV--PGPNTRSPVF 155
             ++  +EV  V    P T  PV+
Sbjct: 1122 FTEIYIEVEDVNDNAPQTSEPVY 1144



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 LDIRVLDANDNPPEF-LQESYFVEVSEDKEVNSEIIQVEATDKDLGSNGHVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ--TIVEVSV-VPGPNT 150
           T   KF ID  +GV+     L    Q  + + ++A D   +  Q  +IV + V +   N 
Sbjct: 863 TDTDKFAIDSMTGVVRVVYPLDREAQPVHYLKIEARDQATEEPQLFSIVLLKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPRFIPPNYRVKVRE 938



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  I+  E R     I+ + ATD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHTPQFRSSLPTGIEVKENRPLGSNIIFMNATDPDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ + A D G   K++  ++++ V+   N   P F 
Sbjct: 765 FIIDMETGMLKILSPLDRETTDKYTLNITAFDLGMPQKAAWHLLDIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   +NS +  +
Sbjct: 824 QESYFVEVSEDKEVNSEIIQV 844



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+   ITY I  V++    +F  + R G I T  KL     A +  ++ 
Sbjct: 2511 VIEVKATDGDSGIYGHITYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVIAVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+VN+   A   ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKYEVNIGSSAPKGTSVIKVLASDADEG 2626



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG +  T K +  E    Y++T+Q T+  G S+ T V V +    N   PVF Q
Sbjct: 1710 FDINPHSGSV-ITQKALDFETLPIYTLTIQGTNMAGLSTNTTVLVHL-QDENDNLPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 23/179 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+         +V    K  + A V V + +   D NDNAP    LP    +++    
Sbjct: 2039 FDREQQEAFDVVVEVTQEHKPSSVAHVVVKVIIE--DQNDNAPVFVNLPYYAVVKVDTA- 2095

Query: 66   ARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLHKFRIDPRSGVIETTGKL---IAGE 120
                I  + A D D G N E+ Y +  +H        F+I P SG I    +       +
Sbjct: 2096 VGHTIRSVTAVDRDSGRNGEVHYYLKEHH------EHFQIGP-SGEISLKKQFEPDTLNK 2148

Query: 121  QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +Y +TV A D G    S++ IV V+V+   N   PVF++  Y   + E   ++S V  +
Sbjct: 2149 EYLVTVVAKDGGNPAFSAEVIVPVTVM---NRAMPVFEKPFYSAEIPENIQMHSPVVHV 2204



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           V+   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 119 VVKAVEKNTNAEARTVVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 178

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  YS    ++     F I P SG +  TG+L   E   Y + + A D G K
Sbjct: 179 GTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYAETQLYEMEILAVDRGMK 230



 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+  L   A  Q+
Sbjct: 1474 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEALDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1529 ILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLYETSLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLMYSITE-GNIG-EKFFMDYKTGSITVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +S + V+++V     +    F Q+ Y   V E ++   T+A IT
Sbjct: 1952 IRASD-GRFASFSSVKINVRESKESHLK-FTQDFYSAVVKENSTEARTLAVIT 2002


>gi|348514377|ref|XP_003444717.1| PREDICTED: protocadherin gamma-A4-like [Oreochromis niloticus]
          Length = 597

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 24/188 (12%)

Query: 14  PNPGKFRFQVIA----REKQGTAASV-------------PVSLTVNLNDINDNAPRLPMI 56
           P+ G+F   V+     REK+ T + V              V + + + D NDNAP L   
Sbjct: 181 PDGGRFVEMVLQNPLDREKEETHSLVLIASDGGEPRRSGTVRIHITVLDANDNAP-LCSE 239

Query: 57  PPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
           P  + +  E     + I  + A D D GVN E+TYSI HV+      F ++ ++G I+  
Sbjct: 240 PVYKAEVKENSPEGKVITTVSANDGDKGVNGEVTYSIAHVAKETKQLFDVNVKTGEIKVA 299

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
           GKL     + Y + VQA+D GG S    V + +    N   P  Q  ++  ++SE +   
Sbjct: 300 GKLDFEKSKTYQLNVQASDHGGYSDTCKVIIQIT-DENDNVPTIQLMSFSNSISEDSPPG 358

Query: 172 STVATITV 179
           +T+A + V
Sbjct: 359 TTIAVLNV 366


>gi|241735363|ref|XP_002413931.1| Gb2-cadherin, putative [Ixodes scapularis]
 gi|215507785|gb|EEC17239.1| Gb2-cadherin, putative [Ixodes scapularis]
          Length = 1518

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 9   LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           LDRD P+   ++RF V A ++ G        + VNL D+NDNAP  P  +      + G 
Sbjct: 171 LDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIYTGNVTENGT 230

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           A   ++ + ATD D    G NA +TYSI    V+  G   F ID  +GVI T    +  E
Sbjct: 231 AGMTVMTMTATDYDDPNEGNNARLTYSIEQNQVNENGELIFTIDEETGVISTAVCCLDRE 290

Query: 121 ---QYSITVQATDTGGKSSQTIVEVSVVP 146
              +Y+I V A D GG   ++   V  +P
Sbjct: 291 TNPEYTIKVVAVDGGGLKGESCCHVLNLP 319



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 15/157 (9%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEAR-----RQIVKIEATDNDLGVNAEITYSIYH 92
           ++ + + D+NDNAP     P  + Q  E       ++I+++ ATD D    + I Y +  
Sbjct: 86  TVLIKVKDVNDNAPIFDR-PTYEAQITEENDRNLPQKILQVTATDGDKDRESLIVYFLTG 144

Query: 93  VS---NTGLHKFRIDPRSGVIETTGKL-----IAGEQYSITVQATDTGGKSSQTIVEVSV 144
                + G  KF I+  +G I     L         Q+  TV A D GG       +V V
Sbjct: 145 QGVDEDLGNSKFAINTTTGEIYVLKPLDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLV 204

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   N  +P F    Y  NV+E  +   TV T+T +
Sbjct: 205 NLKDVNDNAPFFPSAIYTGNVTENGTAGMTVMTMTAT 241


>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
 gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
          Length = 3563

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 20/193 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
            L+ +   LDR+      + F V+A +    +  +ASVPV   +++ D+NDN P   R P 
Sbjct: 2006 LITTIGKLDRELQ--ASYSFMVVATDGGRYEVRSASVPVQ--IHVLDVNDNRPVFERYPY 2061

Query: 56   IPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            +  +   IQ G+    ++K++A D DLG N E+TYS+   ++    KFRI+P +G +  +
Sbjct: 2062 LGKVAPLIQPGQT---LLKVQAHDEDLGANGEVTYSLKGDASGISGKFRINPSTGALSAS 2118

Query: 114  GKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT-RSPV--FQQNTYDVNVSEGA 168
              L   +G+   + V A D G     ++  V ++ G  T  +PV  FQ  TY V V+E +
Sbjct: 2119 QSLASESGKLLQLEVIARDKGTPPMSSVGLVELLVGEATPGAPVLHFQNETYRVRVAENS 2178

Query: 169  SINSTVATITVSR 181
            +  + +  +   R
Sbjct: 2179 ASGTKLLQVVALR 2191



 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 16/161 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPIQIQAG 64
            LDR+     ++  QV A ++ + T+     ++TV + D NDNAPR  +      +Q  A 
Sbjct: 1908 LDRE--QHSRYTLQVQAADRGKPTSRQGHCNITVFVEDQNDNAPRFELSKYTASVQEDAP 1965

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
               R + +I A+D DLGVNA + YS+   +N    +F ID  SG+I T GKL    Q  Y
Sbjct: 1966 PGTR-VAQITASDADLGVNARLVYSL---ANESQWQFAIDSSSGLITTIGKLDRELQASY 2021

Query: 123  SITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            S  V ATD G    +S+   V++ V+   + R PVF++  Y
Sbjct: 2022 SFMVVATDGGRYEVRSASVPVQIHVLDVNDNR-PVFERYPY 2061



 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 17/189 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
            + ++E LDR+      +   V AR+ QGT   +A VPVS+ V   D+NDN+P +  P   
Sbjct: 1204 ISTREPLDRELRE--MYELIVEARD-QGTPVRSARVPVSIRVT--DVNDNSPEIADPQED 1258

Query: 58   PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGK 115
             + ++  +    ++V+I A D D G NA ITYSI    ++  H  F IDP++G+I T   
Sbjct: 1259 VVSVREEQPPGTEVVRIRAIDRDNGQNASITYSIVKGRDSDGHGLFSIDPKTGMIRTRVV 1318

Query: 116  LIAGEQ--YSITVQATDTGGKSSQT--IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   E+  Y + V ATD G    +T  I+ V V+   + R P F  ++    V E A + 
Sbjct: 1319 LDHEERSIYRLGVAATDGGSPPRETVRILRVEVLDLNDNR-PTFTSSSLVFRVREDAVVG 1377

Query: 172  STVATITVS 180
              V +I+ S
Sbjct: 1378 HVVGSISPS 1386



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 11/166 (6%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T    PV     + + + D+NDNAP     M+     +  E    +    A D D G 
Sbjct: 900  QATVGEPPVYGHTQVNIEVEDVNDNAPEFETNMVRISVPENAELGAPLYAAHAHDRDSGS 959

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTI 139
            + ++TYS+    ++G   F ID RSG +  +  L     +++++TV ATD G    S  +
Sbjct: 960  SGQVTYSL--ARDSGKRLFSIDARSGHLVLSHHLDYETSQRHTLTVTATDGGIPPLSSNL 1017

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +  V   N   PVF++  Y VNVSE  SIN+ +  +  S L +G
Sbjct: 1018 TILLDVQDVNDNPPVFEREEYFVNVSESRSINTQIIQVNASDLDTG 1063



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDN P     +   
Sbjct: 451 YLVIVNLPLDREMVS--NYTLSVVATDKGTPPLHASKSIFLKITDVNDNPPEFEQDLYHA 508

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G+N+ I+YS+     T    F+ID ++G+I T   +  
Sbjct: 509 NVMEVADPGTSVLQVLAHDRDEGLNSVISYSLAETPETHAQWFQIDSQTGLITTRSHIDC 568

Query: 119 GEQ--YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             +    +TV A D G      S+  +V +  V   N   P+F Q+ Y+V+V+E   +  
Sbjct: 569 ETEPVPQLTVIARDGGVPPLSSSATVLVTIHDV---NDNEPIFDQSFYNVSVAENEPVGR 625

Query: 173 TVATITVSRLASGCAIM 189
            +  I+ S    G   M
Sbjct: 626 CILKISASDPDCGVNAM 642



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  VIAR+      S   ++ V ++D+NDN P        + +   E   R I+KI A+D
Sbjct: 575 QLTVIARDGGVPPLSSSATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKISASD 634

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y++       L +F +   SG I   G+L   ++  Y   V ATD GG S
Sbjct: 635 PDCGVNAMVNYTLGE-GFKHLTEFEVRSASGEICIAGELDFEKRSSYEFPVIATDRGGLS 693

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +  ++++ +    + R PVF    Y+V++ E
Sbjct: 694 TTAMIKMQLTDVNDNR-PVFYPREYNVSLKE 723



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 18/165 (10%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
            +++ +++ D+NDN P         +   E+R    QI+++ A+D D G NA ITY I   
Sbjct: 1017 LTILLDVQDVNDNPPVFER-EEYFVNVSESRSINTQIIQVNASDLDTGNNARITYRIVDA 1075

Query: 94   ----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
                      S+   H F I P SG I     L     ++Y +TV ATD G  ++     
Sbjct: 1076 GVDNVTTSSSSDVAQH-FGIFPNSGWIYLRALLDRETRDRYQLTVLATDNGTPAAHAKAR 1134

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V + V   N   P FQ+  Y+  + E     S V  +T + L  G
Sbjct: 1135 VVIRVLDANDNDPKFQRTKYEFRIEENLRRGSVVGVVTATDLDLG 1179



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 27/163 (16%)

Query: 38   SLTVNLN--DINDNAPRLPMIPP-------IQIQAGEARR---QIVKIEATDNDLGVNAE 85
            S+TV L   D+NDNAP    + P         I   +A R    +  I A D D G N  
Sbjct: 1581 SVTVRLRIVDVNDNAPHF--VSPKAANGKGASIFINDATRIGEVVAHIVAVDEDTGENGR 1638

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-------YSITVQATDTG---GKS 135
            ITY I      G  +FRI+P++GVIE    L    +       +++ + A D G    KS
Sbjct: 1639 ITYEI--SGGNGEGRFRINPQTGVIELAKSLPPATEDEDKSGRFNLLITAKDHGEPEAKS 1696

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            SQ  +++ +V G +   P F +  Y+  + E A   S V  +T
Sbjct: 1697 SQMSLQI-LVQGNHNNPPRFLEAVYEAKILENAPSGSFVLQVT 1738



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 19/154 (12%)

Query: 38   SLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            ++ V + D+NDNAP         +  P   + G     I  + A D D G NA++ YSI 
Sbjct: 1831 TVQVTIEDVNDNAPEFRPGSCYGLSVPENTEPG----VIHTVVAIDLDEGPNADLVYSIA 1886

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSS-QTIVEVSV-VP 146
               N G +KF ID RSG  E   + +  EQ   Y++ VQA D G  +S Q    ++V V 
Sbjct: 1887 -AGNLG-NKFSIDARSG--ELRVQPLDREQHSRYTLQVQAADRGKPTSRQGHCNITVFVE 1942

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              N  +P F+ + Y  +V E A   + VA IT S
Sbjct: 1943 DQNDNAPRFELSKYTASVQEDAPPGTRVAQITAS 1976



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 9/129 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
              + L+D NDN P+ P+   +   A        + + +A+D D G   ++ YSI      
Sbjct: 2855 FRLELHDENDNEPKFPLSEYVHFLAENEPVGSSVFRAQASDLDRGPFGQLNYSIGPAPSD 2914

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             +    FR+DP +G++ T+  +   EQ   Y + ++A+D GGK ++  V +  +   +  
Sbjct: 2915 ESSWKLFRVDPVTGLM-TSDAVFDYEQRQRYDLQLEASDMGGKKARVGVRIE-IESKDEF 2972

Query: 152  SPVFQQNTY 160
            +P F + TY
Sbjct: 2973 APQFTERTY 2981



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIPPIQIQAGEARRQIV 71
           + F VIA ++ G + +  + +   L D+NDN P        + +    Q  A  +   +V
Sbjct: 680 YEFPVIATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYNVSLKESSQSPAQSSSAPVV 737

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG----KLIAGEQYSITVQ 127
            + ATD D G   +++Y I   ++ G+  FRID  SG I         + A   + + + 
Sbjct: 738 AVVATDPDSGTFGKVSYRIVSGNDAGI--FRIDRSSGEIFVARPDMLSVRAQPTHMLNIS 795

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           A D  G   SS  +V +S++     R P+F++  Y+  V E    G  + S +AT
Sbjct: 796 AIDGAGLRSSSDAVVFLSIIDA-MQRPPIFEKARYNYYVKEDIPRGTVVGSVIAT 849



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LVVSK  LDR+  +  K   + +         S  +++ + + D+NDNAP+     PI +
Sbjct: 1431 LVVSKL-LDREVQSEFKLEIRALDTTASNNPQSSAITVKIEVADVNDNAPKWAQ-DPIDL 1488

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRSGVIE 111
            QA E       I    ATD D G N E+ Y +                 F +DP +G + 
Sbjct: 1489 QAKETTPVGSIIHNFTATDADTGTNGELQYRLLRYFPNVNESQEAATSLFSMDPLTGSLS 1548

Query: 112  TTGKLI--AGEQYSITVQATD 130
                L   A  +Y + VQA D
Sbjct: 1549 LLAPLDFEAVPEYLLIVQALD 1569



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  +++  V+A +    AA     + + + D NDN P+        +I+    R
Sbjct: 1107 LDRETRD--RYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKYEFRIEENLRR 1164

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  ATD DLG NA + YS+     T    F++ P +G I T   L     E Y +
Sbjct: 1165 GSVVGVVTATDLDLGENAAVRYSLL----TANSSFQVHPVTGEISTREPLDRELREMYEL 1220

Query: 125  TVQATDTGGKSSQTIVEVSV 144
             V+A D G       V VS+
Sbjct: 1221 IVEARDQGTPVRSARVPVSI 1240



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 29/197 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP----RLP----MIPPIQIQAGEARR- 68
            +++ +VIA +    A +   SLT+ + D NDNAP    R P     I P   +  ++   
Sbjct: 2506 EYQLEVIASDAAHEART---SLTIRVTDENDNAPVFLARRPPSYFAILPTMSEISDSLST 2562

Query: 69   --QIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------AG 119
              +++ + ATD D  G N+ I Y I    +  +  F +   SGV+      +      +G
Sbjct: 2563 EVELLTVNATDADSEGSNSRIRYLI----DPPVKGFSVHASSGVVSVNMSSLQPPASPSG 2618

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATI- 177
            + Y +T+ A D G  S ++   + V PG ++   + +QQ  Y   +SE A + S V  + 
Sbjct: 2619 D-YFVTILAKDEGKPSMKSSTLLRVQPGDSSSGRLQYQQTQYRAQISEAAPLGSIVLQLG 2677

Query: 178  -TVSRLASGCAIMNKEE 193
              V   A   A  N+EE
Sbjct: 2678 QEVHEQAFVIASGNEEE 2694



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 267 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 323

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRIDPR+G I     L     E + + V A D G +  +T   VS+ V   
Sbjct: 324 RRQSDKEKMFRIDPRTGAIYINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 383

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F  +     +SE A     VA I+V
Sbjct: 384 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 418



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 21/190 (11%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
            P +    ++AR       +    L V L D NDN+P+      +  +  G  +   V ++
Sbjct: 2291 PNEIHLVLVARSADAPFLAAYAELVVELEDENDNSPQFSQRKFVATVSEGNNKGTFVAQV 2350

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
            +A D D G NA + Y I  V     + F I+P  SG+++T   L     + Y++ + ATD
Sbjct: 2351 QAFDADAGANARLRYHI--VDGNHDNAFIIEPAFSGIVKTNIVLDREIRDIYNLKIIATD 2408

Query: 131  TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS-------- 180
             G    +    + V +V   N   P F  N   V+VSE   + + + +I+ +        
Sbjct: 2409 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VSVSEATELGAVITSISANDVDTYPAL 2466

Query: 181  --RLASGCAI 188
              RLA+  A+
Sbjct: 2467 TYRLAADSAV 2476


>gi|443728421|gb|ELU14777.1| hypothetical protein CAPTEDRAFT_226654 [Capitella teleta]
          Length = 2555

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 9/154 (5%)

Query: 41  VNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           V + DIN+NAPR P      P  ++  +    +V++ A D D G N  ITYSI   ++  
Sbjct: 440 VEIKDINNNAPRFPECSSYNPTVLEKEDVGTSVVQVRAVDQDSGANGNITYSIVKSNDQS 499

Query: 98  LHKFRIDPRSGVIETTGKL-----IAGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTR 151
             +F+I+P SG++ T         I    + +T++A D G  S      V V  G  N  
Sbjct: 500 SERFQIEPTSGILRTADIFDREGQIGVTGFGVTIKAKDQGNPSLAGFCTVRVKIGDTNDN 559

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF    Y  ++ E + +   V  +  +   +G
Sbjct: 560 PPVFNLPEYSTSIEENSVVGKRVKQVYATDRDAG 593



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 22/193 (11%)

Query: 3    VVSKENLDRDPPNPGK--FRFQVIAREKQGT---AASVPVSLTVNLNDINDNAP---RLP 54
            + +  +LDRD P  G+  + F V+A+++ GT   + +    + V   DINDNAP   R  
Sbjct: 1021 IYATRSLDRDAPY-GRPVWNFNVLAQDEVGTGQPSLTGYAEVRVMPRDINDNAPVFDRNR 1079

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT 113
            +I  +  +   AR  ++ + A+D D G N  + YS+  V + G    F I+  +G+I T 
Sbjct: 1080 LIGSVP-ENSRARMTVLTVIASDVDQGNNGSVHYSLKQVQSRGNQPLFSINSHTGLISTM 1138

Query: 114  GKLIAG----EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE- 166
               +      E+Y+I VQA D G    SS  +V + V+   N   P F Q  Y   +SE 
Sbjct: 1139 LDNVLDRETEEEYNIIVQAKDKGSPPMSSSAVVTI-VITDVNDHPPKFTQPIYKATMSEN 1197

Query: 167  ---GASINSTVAT 176
               GASI S  AT
Sbjct: 1198 YKAGASITSVSAT 1210



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVS 94
           +L V+L D+NDNAP  P+   I     E       I+++ ATD D   NA++TYS+   S
Sbjct: 224 TLIVDLIDMNDNAPMFPLSQYIMHGIAETASIGTDIMQVTATDLDSVTNAQLTYSVSD-S 282

Query: 95  NTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGK--SSQTIVEVSVVPGP 148
           N  +         G I T  +L    I    Y+ T+ ATD G    +   ++ VS V   
Sbjct: 283 NFSVQTLN---NIGYIRTAKRLDYDHIPNHTYNFTITATDNGTPTLTGSAVIRVS-VDNV 338

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATI 177
           N   PVF Q    V VSE A+ N+ V  +
Sbjct: 339 NDEDPVFTQKIEHVQVSEDAAQNTVVHVM 367



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 21/190 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+     ++   V A++K     S    +T+ + D+ND+ P+   P+      +  +A
Sbjct: 1143 LDRETEE--EYNIIVQAKDKGSPPMSSSAVVTIVITDVNDHPPKFTQPIYKATMSENYKA 1200

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---------- 116
               I  + ATD D+G++A +TY    + NT   K+     S     TG L          
Sbjct: 1201 GASITSVSATDKDMGIHARLTY----ILNTQDRKY-FSMTSVEATNTGVLKVFQPVDYDT 1255

Query: 117  IAGEQYSITVQATDTGGKSSQT-IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            +    +++TV   D   +++ T  VEV V    N   P F  N   V + E  + ++T+ 
Sbjct: 1256 LINPVFNLTVTVHDPDSRNNDTAYVEVRVT-DYNDNPPQFVPNIKRVTIHENTTKDTTLY 1314

Query: 176  TITVSRLASG 185
              T +   +G
Sbjct: 1315 RFTATDRDTG 1324


>gi|73954163|ref|XP_536461.2| PREDICTED: protocadherin Fat 2 [Canis lupus familiaris]
          Length = 4354

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +  A+   V + + + DINDN+P+   +    
Sbjct: 2969 WRIFSRKTLDRE--HMAKYLLRITASDGKFQAS---VLVEIFVLDINDNSPQCSQL---- 3019

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3020 LYTGKVSEDTSPGHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGELTTLT 3076

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3077 ALDREKKDTYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPHFFPSHCAVAVFDNTTVKT 3135

Query: 173  TVATI 177
             VA +
Sbjct: 3136 PVAVV 3140



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P+   +P   I Q G E    + ++ ATD DLGVN  ITY+         
Sbjct: 2061 VSVEDVNDNHPQFKHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGAITYAF----AEDY 2116

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV +V   N  +P+FQ
Sbjct: 2117 TYFRIDPYLGDISLKKPFDYQALNKYHLKVFARDGGTPSLQTEEEV-LVTVRNKSNPLFQ 2175

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2176 SPYYKVRVPENITLYTPI 2193



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            KF   +    K  ++ S   ++ VN+ DIN++ PR P  +     ++       ++ + A
Sbjct: 3291 KFFLSIECSRKGSSSLSDMTTIVVNITDINEHRPRFPQDLYSTRVLENAIVGDVVLTVSA 3350

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D   N+ ITYS+  V    L  F + P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3351 TDEDGPANSAITYSL--VGGNQLGHFTVHPKKGELQ-VAKALDWEQTSSYSLRLRATDSG 3407

Query: 133  GK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                   T++ + VV   N   P F Q  Y  +V E + I S V  + +S
Sbjct: 3408 RPPLHEDTVIAIQVV-DVNDNPPRFFQLNYSTSVQENSPIGSKVLQLILS 3456



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 21/154 (13%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + +++ D+NDN P         RLP     +  +      + ++ A+D D G+N  +TYS
Sbjct: 1231 VVIHIVDVNDNPPVFSHKLFNVRLP-----ERLSPATPGPVYRLVASDPDEGLNGRVTYS 1285

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
            I     +    F IDP +G++ ++   +AGE   +T++ATD+G    S+   + +  +P 
Sbjct: 1286 I---EESDEESFSIDPVTGMVSSSSIFMAGEYNILTIKATDSGQPPLSASVRLHIEWIPQ 1342

Query: 148  PNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            P + S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1343 PRSSSIPLAFDEPHYSFTVMETDPVNHMVGVISV 1376



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +++++ D N ++PR   +      P    +G    ++
Sbjct: 1521 PSQHTLTVMVRDQEMPIKRNFVWVSIHVEDGNLHSPRFTQLHYEASVPDTTASG---TEL 1577

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            +++ A D D G NAEI YS+   ++ G   F ID   G+I    KL       YS+TV+A
Sbjct: 1578 LQVRAMDADRGANAEIHYSLLKGNSEGF--FNIDTLLGIITLAQKLDQANHARYSLTVKA 1635

Query: 129  TDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G      +  V ++V P  ++ +P+F +  Y V + E   + S +  ++ +
Sbjct: 1636 EDQGSPQRHDLATVIINVYPS-DSSAPIFSKAEYFVEIPESIPVGSPILLVSAT 1688



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAP   P    + +      
Sbjct: 3078 LDRE----KKDTYSLVAKATDGGGQSCQADVTLHVEDVNDNAPHFFPSHCAVAVFDNTTV 3133

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI  E   ++   E   +
Sbjct: 3134 KTPVAVVLARDPDQGANAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLQIRPQEALEL 3190

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V +SVV G +   PVF    + V V E A + + V   AT+T
Sbjct: 3191 TVRASDLGTPIPLSTLGTVTISVV-GLDDYLPVFLNTEHSVQVPEDAQLGTEVLRLATLT 3249



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2540 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2597

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  + +       ++P +GV++    L+  E
Sbjct: 2598 QSNVSKDSPVIQVLAYDADEGQNADVTYSVDSMEDLDEEVIEVNPITGVVKVKESLVGLE 2657

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     ++V + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2658 NRAFDLKIKAQDGGPPHWNSLVLLRLQVVPNEVSLPQFSEPLYTFSASEDLPEGSEIGSV 2717



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2786 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPVDP 2845

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2846 GSNIHELFAIDSETGWITTLQELDCETHQTYRFYVVAYDHGRTIQLSSQVMVEVSIT-DE 2904

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2905 NDNAPQFASEDYRGSVVENSEPGEVVATL 2933



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1469 ELLQVQATDPDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1526

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            TV   D      +  V VS+ V   N  SP F Q  Y+ +V
Sbjct: 1527 TVMVRDQEMPIKRNFVWVSIHVEDGNLHSPRFTQLHYEASV 1567



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2260 TVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGQNRDVSYEIVEDGS 2319

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L    Q  + + V+A D G    + +T+V V+ V   N  
Sbjct: 2320 DISKFFQINGSTGEMSTVQELDYETQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2378

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2379 PPEFRQPQYEANVSELATCGHLVLKV 2404



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++  T  S    + + + D+NDN P++  P+  P   +       +++++A 
Sbjct: 1106 YWLTVLAVDRGSTPLSSVTEVYIEVTDVNDNPPQMSRPVFYPSVREDAPLHTSVLQLDAR 1165

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   +N G   F I P +G++ T  +L     +++ + V   D G  
Sbjct: 1166 DPDSSSKGKLTFNITSGNNMGF--FVIHPVTGLLSTARQLDRENKDEHILEVTVLDNGEP 1223

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            S ++   V + +   N   PVF    ++V + E  S
Sbjct: 1224 SLKSTSRVVIHIVDVNDNPPVFSHKLFNVRLPERLS 1259



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPP--IQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   QI   +  E    I +++A D D   N  + Y++  +
Sbjct: 809 LTVNVKDWNDNAPRF---PPGGYQITISEDTEVGTTIAELKAKDADSDDNGRVRYTL--L 863

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 864 SPT--EKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPRKGHQ 907



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 431 HYQLHIRTSPGLAST---TVVIDIVDCNNHAPIFNRSSYDGTFDENIPP--------GTS 479

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           I+ + ATD D G N  +TYSI   +      F IDP  G+I T+  +   +    Y+  V
Sbjct: 480 ILTVTATDQDHGENGYVTYSI---TRPKAVPFSIDPYLGIISTSKPMDYELMRRIYTFRV 536

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVS+   +   N   P+F+Q     ++ E   +  +V T++
Sbjct: 537 RASDWGSPFRQE-KEVSISLRLKNLNDNKPMFEQVNCTGSIREDWPVGKSVMTVS 590



 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2216 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2274

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2275 FSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 2305



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 17/164 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NA+  Y+     N
Sbjct: 137 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGPNAKFYYAF----N 191

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGP 148
                F I P SGV+   GKL      +Y + V A D   K S+      +  + +   P
Sbjct: 192 MRSEMFAIHPTSGVVTLAGKLNVTWRGRYELQVLAVDRMRKISEGNGFGNLAALVIHVEP 251

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
             R P     T  V  S  +S  +T AT+ V   +SG  + + E
Sbjct: 252 ALRKP--PAITSVVVASPDSSEGTTYATVMVDANSSGAEVDSLE 293



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 24/167 (14%)

Query: 10   DRDPPNPGKFRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRL-------PMIPPI 59
            + D  N   F+F V   + QG     AS PV + +N+ D+ND+ PR         +  PI
Sbjct: 1830 EMDYENMPSFQFSVYVHD-QGNPILFASRPVQVIINVRDVNDSPPRFSDQVYEVAIAKPI 1888

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
                     +++ + A+D D    +E+ YSI   +        I P +G I        G
Sbjct: 1889 HWGM-----ELLIVRASDED----SEVNYSIK--TGNADEAVAIHPVTGRISVLNPAFLG 1937

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                +T++A+D G      +V++S+    NT S  F +  Y   V E
Sbjct: 1938 VSRELTIKASD-GLYHDTALVKISLTQALNT-SLQFDKIVYRATVKE 1982



 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   ++ G   F I+  +G++     L       Y + V 
Sbjct: 737 LARLAATDPDTGFNGKLVYVIADGNDEGC--FDIELETGMLTVAAPLDYEVTSFYILNVT 794

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +
Sbjct: 795 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQITISEDTEVGTTIAEL 845


>gi|23956048|ref|NP_034090.1| protocadherin alpha-11 precursor [Mus musculus]
 gi|13876254|gb|AAK26047.1| protocadherin alpha 11 [Mus musculus]
 gi|162319564|gb|AAI56385.1| Protocadherin alpha 11 [synthetic construct]
 gi|225000374|gb|AAI72667.1| Protocadherin alpha 11 [synthetic construct]
          Length = 950

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 226 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 379



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   + AG A  ++V       
Sbjct: 530 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSELVSRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 636



 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 404 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 460

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 461 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 493


>gi|26335845|dbj|BAC31623.1| unnamed protein product [Mus musculus]
          Length = 923

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 226 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 379



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   + AG A   +V       
Sbjct: 530 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSGLVSRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 636



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 404 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 460

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 461 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 493


>gi|403256580|ref|XP_003920947.1| PREDICTED: uncharacterized protein LOC101030360 [Saimiri boliviensis
            boliviensis]
          Length = 1858

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 10/187 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 863  LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEILDVNDNAPEFEQ-PFYRVQ 919

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              E       +VK+ ATD D GVN EI+YS++  S+     F+I+P +G IE   +L   
Sbjct: 920  ISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKKQLDFE 979

Query: 120  --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + Y + V+A D G  S +  V + V+   N  +P    + +   V E A   + VA  
Sbjct: 980  KLQSYEVNVEARDAGTFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPVPENAP-ETVVALF 1037

Query: 178  TVSRLAS 184
            +VS L S
Sbjct: 1038 SVSDLDS 1044



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 8/144 (5%)

Query: 9    LDR--DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            LDR  D     + R  + A +      S    + + + DINDNAP  P     ++Q  E 
Sbjct: 1496 LDRALDYEEKAELRLTLTALDGGSPPRSGTTLVLIQVLDINDNAPEFPQ-SLYEVQVPED 1554

Query: 67   R---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            +     IV I A D D G + +I+Y+ +H S      F I+P SG +     L   A + 
Sbjct: 1555 KPIGSWIVTISAKDLDAGNHGKISYTFFHASEDVRKTFEINPMSGEVNLRSPLDFEAIQS 1614

Query: 122  YSITVQATDTGGKSSQTIVEVSVV 145
            Y+I +QATD GG S +  + V V+
Sbjct: 1615 YTINIQATDGGGLSEKCTLLVKVM 1638



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +V + A D D G N E++Y+  H S      F I  +SG I  T  L   + E YS+ +Q
Sbjct: 261 VVTVSAWDLDSGTNGELSYTFSHASEDIHKTFEIHQKSGEITLTAPLDFESIESYSMIIQ 320

Query: 128 ATDTGGKSSQTIVEVSVV 145
           ATD GG   ++ V + V+
Sbjct: 321 ATDGGGLFGKSTVRIQVM 338



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 20/196 (10%)

Query: 3   VVSKENLDRD----PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIP 57
           ++  E LDR+       P    FQV+ +          + + + + DIND++P  L    
Sbjct: 84  LLLSETLDREELCGSTEPCVLYFQVLMKNPTQF-----LQIELQVRDINDHSPVFLEKEM 138

Query: 58  PIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG-----VI 110
            ++I        +  +E A D+D+GVNA  +Y+I    N+  H K R++P +      V+
Sbjct: 139 LLEIPENSPVGAVFLLESAKDSDVGVNAVKSYTI--SPNSHFHIKMRVNPDNRKYPELVL 196

Query: 111 ETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           +         + S  + A D G    S T +   VV   N  SP F+Q  Y+V + E + 
Sbjct: 197 DKALDYEEQPELSFILTALDGGSPPRSGTALVRVVVVDVNDNSPEFEQAFYEVEILENSI 256

Query: 170 INSTVATITVSRLASG 185
           + S V T++   L SG
Sbjct: 257 LGSLVVTVSAWDLDSG 272



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 26/195 (13%)

Query: 7    ENLDRD----PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI 61
            E LDR+       P    FQV+              + +++ DIND++P  L     I+I
Sbjct: 1388 EKLDREELCGSTEPCVLHFQVVLENPLQF-----FQVELHVKDINDHSPTFLDNEILIKI 1442

Query: 62   QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
              G        +E A D D+G N+   Y+I   S    H +   P SG  +   +L+   
Sbjct: 1443 SEGTTIGTTFLLESAQDLDVGSNSLQNYTISPNS----HFYIRIPDSGDRKIYPELVLDR 1498

Query: 121  --------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
                    +  +T+ A D G   +S  T+V + V+   N  +P F Q+ Y+V V E   I
Sbjct: 1499 ALDYEEKAELRLTLTALDGGSPPRSGTTLVLIQVL-DINDNAPEFPQSLYEVQVPEDKPI 1557

Query: 171  NSTVATITVSRLASG 185
             S + TI+   L +G
Sbjct: 1558 GSWIVTISAKDLDAG 1572


>gi|410908209|ref|XP_003967583.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
          Length = 2990

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 17/172 (9%)

Query: 26   REKQGTAASVPVS----LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
            R +    A+VP++    + VN+ D+NDN P     +      +  +    ++++ A D D
Sbjct: 1133 RVRAQNVAAVPLAAFTTVYVNITDVNDNVPFFTSSIYEASVTEGAQIGMSVLQVSAHDKD 1192

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG----- 132
            LG+N +ITY +   S+     FRIDP  G+I T       A   Y + VQ+ D+      
Sbjct: 1193 LGLNGQITYKLLSDSSGDHSLFRIDPELGIIYTEAVFDREARSSYLLEVQSEDSQESARP 1252

Query: 133  GKSSQTIVEVSVV----PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            GK+ Q   + + V       N   PVF Q  Y+V V E A +   V T++ +
Sbjct: 1253 GKNKQPNSDTAYVRVFISDVNDNKPVFAQRLYEVGVDENADVGLAVVTVSAT 1304



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            +RF V+A +++G   +    + +N+ DINDNAP      P    +  A        +V++
Sbjct: 1454 WRFVVMATDEEGEGLTGFTDVIINVWDINDNAPTF-TCAPDNCHSSVAENSAPGMLVVEM 1512

Query: 74   EATDND---LGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLIAGE---QYSI 124
             A D D   +G NA +TY I   ++  +HK   F ID  +G I    + +  E    + +
Sbjct: 1513 TAVDLDDAAVGQNAILTYRITENAHN-IHKEDLFTIDSSTGTISVAAEGLDREFANTHRV 1571

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V+A+D GG +    V ++V    N  +P F ++     VSE    +S+V  +
Sbjct: 1572 VVEASDGGGMTGTATVTIAVT-DINDHTPKFLEDWCGARVSENTEKDSSVLEL 1623



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 13/132 (9%)

Query: 41  VNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           + + D+NDN P   M P     +      A   + +++A D D G + E+    + +S+ 
Sbjct: 420 LKITDVNDNIPEWDMKPYPYLAVVSHEAPAGTFVYQLQAHDADEGRSGEVE---FFLSDG 476

Query: 97  GLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPV 154
           G   F ++ +SG + +TG +L    +Y ++V A D  GG+S+  +  +SVV G   R+P 
Sbjct: 477 GDGCFSVEKKSGQVVSTGLELQRDREYLLSVVALDGLGGRSTPAM--LSVVAG--ARAPQ 532

Query: 155 FQQNTYDVNVSE 166
           F   +Y +++ E
Sbjct: 533 FTNASYAISIPE 544



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 13/113 (11%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---GEQYSITV 126
           ++++ ATD D G NAE+TY  Y +S      F I P  G I   G+L        Y   V
Sbjct: 654 LLQVLATDCDSGSNAELTY--YTLSP----DFSISPH-GTIFPAGRLDYERPNHLYEFVV 706

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD G +  S  T V V +    N  +P F Q  Y   VSE A  N+ VAT+
Sbjct: 707 MATDGGNEPHSGTTTVRVRMA-NINDEAPEFSQPVYRTFVSEDAGPNTLVATV 758



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 41   VNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V ++D+NDN P     +  + + +  +    +V + ATD D G NA++ Y I   +  G+
Sbjct: 1267 VFISDVNDNKPVFAQRLYEVGVDENADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGV 1326

Query: 99   HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
              F I+P  G I     L   +Q    +    + GK       V  V   N  +PVF  N
Sbjct: 1327 --FDIEPEVGTIFVAQPLDYEQQKRFKLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMN 1384

Query: 159  TYDVNVSE 166
             Y  +V+E
Sbjct: 1385 EYYGSVTE 1392



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV + D NDN+P+   +        +       +++ A D+D G NA ITYS+   S  
Sbjct: 938  LTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAAHDDDFGTNAAITYSM---SLD 994

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
                 R++P +G +     +      +  + ATD G +S+   + V++    N + P ++
Sbjct: 995  QPEYLRVNPVTGWVYVNQPISQRTYITRDIVATDGGNRSTSVELAVTITNVKN-QPPEWE 1053

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q  Y V ++E  + ++ + T+
Sbjct: 1054 QENYSVVIAENTARDTPIVTV 1074



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 16/135 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIPPIQI 61
            +E LD + P    F   +   +   ++    +  T+ + D NDNAP       ++ P+  
Sbjct: 1665 REKLDFEKPAEQGFNLTIKVEDSDFSSV---IHCTIQVEDENDNAPEFASSSHLLSPLP- 1720

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----I 117
            +       I+++ ATD D G+N EI  SI   S+   H F +  R+G++     L    +
Sbjct: 1721 EDTPVGTSIIQVVATDTDSGLNGEILCSILPQSDPHGH-FAVS-RAGLVTVARPLDREAV 1778

Query: 118  AGEQYSITVQATDTG 132
            AG  Y + V ATD G
Sbjct: 1779 AG--YELVVVATDRG 1791


>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae]
 gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]
          Length = 3584

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 26/197 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 414 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPSFEAE---QF 468

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-------LHKFRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++ G       L  FRID RSGV
Sbjct: 469 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGGGLAQDQELPIFRIDSRSGV 528

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPNTRSPVFQQNTYDVN 163
           I T   L     + Y + V A D     S+    T   +  V   N   P F + TY V 
Sbjct: 529 ISTRSSLDRETSDSYHLLVTAADMASAQSERRTATASVLVKVLDDNDNYPQFSERTYTVQ 588

Query: 164 VSE---GASINSTVATI 177
           V E   G S ++TVA I
Sbjct: 589 VPEDQWGGSEDNTVAHI 605



 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 654 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 713

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 714 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQARFAFQVVAKDGGVP 771

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 772 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 818



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 863  RFVLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 920

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+ ++G I T+  L       Y +TV A D
Sbjct: 921  TDSDVGVNAQITYSLNEESINGLGSPDPFSINSQTGAIVTSAPLDRETTSGYLLTVTAKD 980

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 981  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1031



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     +F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 751 LDRE--EQARFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 805

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 806 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 861

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 862 KRFVLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 920

Query: 180 S 180
           +
Sbjct: 921 T 921



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 958  IVTSAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1015

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            ++       ++++ A+D D+G+N  I Y +    +     F IDP SG I T   L   +
Sbjct: 1016 LEDALVGTSVIQVAASDPDVGLNGRIKY-LLGDRDVEDGSFVIDPTSGTIRTNKGLDRES 1074

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +T  A D G     + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1075 VAVYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFPSDKITLYVPENSPVGSVVGEI 1134



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 406 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPSF 463

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 464 EAEQFEASIREGATVGSTVITL 485



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 528 VISTRSSLDRETSD--SYHLLVTAADMASAQSERRTATASVLVKVLDDNDNYPQFSERTY 585

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 586 TVQVPEDQ-WGGSEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 642

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 643 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 699


>gi|22095545|sp|Q9QYP2.1|CELR2_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
           AltName: Full=Multiple epidermal growth factor-like
           domains protein 3; Short=Multiple EGF-like domains
           protein 3
 gi|6681360|dbj|BAA88687.1| MEGF3 [Rattus norvegicus]
          Length = 2144

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 6   YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 57

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 58  SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRA 116

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 117 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 171



 Score = 38.5 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 97  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 154

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 155 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 212

Query: 120 E--QYSITVQATDTGGKSSQTI 139
           +  +Y + +QAT     S  T+
Sbjct: 213 DRPEYILVIQATSAPLVSRATV 234


>gi|405961425|gb|EKC27229.1| Neural-cadherin [Crassostrea gigas]
          Length = 2318

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 12/183 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           + ++E LDR+          V  ++K         +  VN+ DINDN P           
Sbjct: 134 IYTREKLDRETQFSKNLFITVKVQDKGSNPLDDYCTFPVNIQDINDNDPSFGTTDYTGRV 193

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           +++     +++ I+ATD DLG NA+I YS+    N+    FRI+  +G IE +G L+A +
Sbjct: 194 LKSAPVGTKVLTIKATDKDLGSNADIKYSLIDNPNS---LFRINADTGDIEVSGSLLATD 250

Query: 121 QYSI-TVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQ--QNTYDVNVSEGASINSTVA 175
              I   +ATD G   +S    V +S+    +   P++     TY V  SEG  +N  +A
Sbjct: 251 TSVILKARATDQGNPPRSGDVTVTISLTTDSSVLPPLWNPINPTYTVKESEG--VNFVIA 308

Query: 176 TIT 178
           T+T
Sbjct: 309 TLT 311



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)

Query: 9   LDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRL---PMIPPIQI 61
           LDRD P+ G+  ++F V+A ++   A+ +    TV +   D+NDN P+     +I  ++ 
Sbjct: 694 LDRDQPD-GRDVYQFTVLAVDEPAAASHLTGYATVQVFPLDVNDNQPKYDSNSLIGSVRE 752

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +G     ++ I A D D G NA++TY I   +      F+I+  +GV+ TT   +  E+
Sbjct: 753 MSG-VDVSVMTIIAKDYDEGANAKVTYLITPGTQEPSPAFKINNATGVVVTTVGDLDREK 811

Query: 122 ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              Y+  V A D G          +V +   N  +PVF++  Y   + E
Sbjct: 812 NPVYTFQVVAMDAGTPPLSATATATVNIKDINDNNPVFEKKIYSETIPE 860



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 18/183 (9%)

Query: 13  PPNPGKFRFQVIAREKQGTAASVPVSL-------TVNLNDINDNAPRLPMI--PPIQIQA 63
           PP      F  +  +  G+  S PV +       T+N+ D  +  P+       P   + 
Sbjct: 24  PPTDRDQIFLNVTAKDDGSCCSNPVRILSSTALITINIEDEENQKPKFENCNYSPSVKEE 83

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLIAG 119
            +   ++VK+ ATD + G N ++ YSI  +   G ++    FRI+  +G I T  KL   
Sbjct: 84  QDPGVEVVKVTATDRNRGQNGKLEYSITSIKELGDNQEKNYFRINSTTGQIYTREKLDRE 143

Query: 120 EQYS----ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            Q+S    ITV+  D G           V +   N   P F    Y   V + A + + V
Sbjct: 144 TQFSKNLFITVKVQDKGSNPLDDYCTFPVNIQDINDNDPSFGTTDYTGRVLKSAPVGTKV 203

Query: 175 ATI 177
            TI
Sbjct: 204 LTI 206



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVI-----AREKQGTAASVPVSLTVNLNDINDNAPRLPMI 56
           ++ S+   DR+  +    +   I     +R   G   +    + V++ D+NDN P     
Sbjct: 468 MISSRMQFDRETKDFYILKVYAIDGAPSSRGTSGAHNTGSAGVRVSIKDVNDNEPYFEQ- 526

Query: 57  PPIQIQAGEAR------RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
              ++     R      + I+ IEA D D    A+ TYS+     +G   F +   +G I
Sbjct: 527 ---ELYTASVREDSFTGQSIITIEAKDRD---EAKFTYSL-----SGSSLFAVKSGTGEI 575

Query: 111 ETTGKLIAGEQ--------YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
              G L    +        Y++T+   D G  S+QT V+++++   N  +P F QNTY V
Sbjct: 576 YVAGNLDYETEPNASILLVYNVTLVVND-GKYSNQTTVQITII-DTNDNTPKFDQNTYVV 633

Query: 163 -NVSEGASINSTVATITVS 180
            N+ E    N  + T+  +
Sbjct: 634 RNLIEETVYNKILITVNAT 652



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 16/120 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PM 55
           +V +  +LDR+  NP  + FQV+A +      S   + TVN+ DINDN P          
Sbjct: 800 VVTTVGDLDREK-NP-VYTFQVVAMDAGTPPLSATATATVNIKDINDNNPVFEKKIYSET 857

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           IP  Q         I+ I A  NDL ++  +TYS+   ++    +  +D R G +E   K
Sbjct: 858 IPETQ------EGLILTIRA--NDLDIDDTLTYSLIGANDRTHFQITVDGRDGRLEVYTK 909


>gi|223461499|gb|AAI41350.1| Pcdha11 protein [Mus musculus]
          Length = 904

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P    +   ++I    A+  +V  + ATD D G N ++ YS+  + 
Sbjct: 226 VQLWVRVLDVNDNDPVFDHLEYKVRIMENAAKETLVITLNATDLDEGANGQLVYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNT 150
            TG H F +D ++G +   G L   E   Y I V ATD G        +V V ++   N 
Sbjct: 286 PTGRHLFTLDEKNGELRVNGTLDYEENKLYEIEVLATDKGTPPMVGHCVVLVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            SP     +  + V E A  N+ +A I+VS L SG
Sbjct: 345 NSPEVTLTSLSLPVREDAQPNTVIALISVSDLDSG 379



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+    A    V+L V + D NDNAP L  +P   + AG A  ++V       
Sbjct: 530 LQFQVSARDAGVPALGSNVTLQVFVLDENDNAPTL--LPHGAVGAGGAVSELVSRSVGSG 587

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 588 HVVTKVRAVDADSGYNAWLSYEVQLGTGGVRSPFRVGLYTGEISTTRAL 636



 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V   +LDR+      +   VIAR+    + S  VS++V + D+NDNAP     P   
Sbjct: 404 YSLVLDSSLDRE--RVSTYDLVVIARDGGSPSLSATVSVSVEVADVNDNAPVFAQ-PEYT 460

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           +   E       I  + A D D   NA ++YS+
Sbjct: 461 VFVKENNPPGAHIFTVSAMDADAQENALVSYSL 493


>gi|444713187|gb|ELW54095.1| Protocadherin beta-18 [Tupaia chinensis]
          Length = 1696

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 13/157 (8%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDNAP     P  ++Q  E       ++K+ ATD D GVN E++YS  HVS      F
Sbjct: 234 DINDNAPEFER-PLYEVQIPENSPLDSLVIKVSATDLDAGVNGELSYSFSHVSRDIRKIF 292

Query: 102 RIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            I P SG +     L     + Y++ +QA D GG S ++++ V VV   N   P     +
Sbjct: 293 EIHPDSGQVYLKASLDFETIQSYTVNIQAVDGGGLSGKSVILVHVV-DVNDNPPEIAMTS 351

Query: 160 YDVNVSEGASINSTVATITVSRLASG------CAIMN 190
               + E +S    VA  +V    SG      C+I +
Sbjct: 352 LTSPIPENSSPEMVVAVFSVRDQDSGDNGKTVCSIQD 388



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 6/147 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
            +V  ++LDR+     + R  + A +      S  + + V + D+NDN P     +  +Q+
Sbjct: 1300 LVLDKDLDRE--EQAELRLTLTALDGGSPPRSGTIQIRVLVMDVNDNVPEFAQTLYEVQV 1357

Query: 62   -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
             +       ++K+ ATD D G N EI+YS+++ S      F +   SG I    KL    
Sbjct: 1358 PENSPVGSLVLKVSATDLDTGTNGEISYSLFYSSQEVGKTFELSNSSGDIRLIKKLDFET 1417

Query: 120  -EQYSITVQATDTGGKSSQTIVEVSVV 145
               Y + V+ATD GG S +  V + V+
Sbjct: 1418 ISSYELDVEATDGGGLSGKCSVLIKVL 1444



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 9/149 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV+ KE LDR+     + R  ++A +      +    + +++ DINDNAP     P  Q+
Sbjct: 656 LVLDKE-LDRE--EQTELRLALMAVDGGIPPKTGTTQVLIDILDINDNAPEFSQ-PLYQV 711

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           Q  E       +  + A D D G+N EI YS ++      + F ++  +G I+   KL  
Sbjct: 712 QIPENSPVGSIVTTVSARDLDTGINGEIFYSFFYGDEEISNTFALNELTGEIKIIKKLDF 771

Query: 119 GE--QYSITVQATDTGGKSSQTIVEVSVV 145
            +   Y + ++A+D  G S +  V + VV
Sbjct: 772 EKIRSYKVDIKASDGSGLSGKCTVIIQVV 800



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATD 77
           ++V  +   G+  S   ++ + + DINDNAP L    ++ P+   + E    +  I+  D
Sbjct: 777 YKVDIKASDGSGLSGKCTVIIQVVDINDNAPELTVASIVSPVPENSPEITVALFSIQ--D 834

Query: 78  NDLGVNAEITYSIY----HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
            D G N  +  SI      +    +  F      G ++   +     +Y+IT+  TD G 
Sbjct: 835 RDSGENGRMACSIQDDVPFILKPSVENFYRLVTEGALDRESQ----AEYNITITVTDLGT 890

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               T   ++V V   N  +P F Q +Y + V E  S    + TI+ +   +G
Sbjct: 891 PRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAG 943



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 40/202 (19%)

Query: 7    ENLDRD----PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            E LDR+    P  P    FQV+ ++         +   + + DIND++P  P        
Sbjct: 1194 EKLDREELCGPTEPCVMHFQVLLKKPMEV-----IRAELLVKDINDHSPEFP-------- 1240

Query: 63   AGEARRQIVKI-------------EATDNDLGVNAEITYSI-----YHVSNTGLHKFRID 104
                R   +KI             +A D D+G N    Y I     +HVS       R  
Sbjct: 1241 ---EREMTLKIPENSPPGTVFPLTKAQDLDVGNNNVQKYDIGPNSHFHVSTHDRGDGRKY 1297

Query: 105  PRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVN 163
            P   V++         +  +T+ A D G       +++ V V   N   P F Q  Y+V 
Sbjct: 1298 PEL-VLDKDLDREEQAELRLTLTALDGGSPPRSGTIQIRVLVMDVNDNVPEFAQTLYEVQ 1356

Query: 164  VSEGASINSTVATITVSRLASG 185
            V E + + S V  ++ + L +G
Sbjct: 1357 VPENSPVGSLVLKVSATDLDTG 1378



 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            Y +V++  LDR+  +  ++   +   +      +   S+TV ++D+NDNAP         
Sbjct: 863  YRLVTEGALDRE--SQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTL 920

Query: 61   I--QAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTGK 115
            +  +       I  I ATD D G NA++TYS+   H     L     I+  +G +     
Sbjct: 921  LVRENNSPALHIGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQLFALRS 980

Query: 116  LI--AGEQYSITVQATDTG--GKSSQTIVEVSVV 145
            L   A   +   V+A D G    SSQ +V V V+
Sbjct: 981  LDYEALRAFEFGVRAADRGSPALSSQALVRVLVL 1014



 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--HV 93
           S+TV ++D+NDNAP         +  +       I  I ATD D G NA++TYS+   H 
Sbjct: 437 SITVLVSDVNDNAPAFTQASYTLLVRENNSPALHIGTISATDADAGTNAQVTYSLLPPHD 496

Query: 94  SNTGLHKF-RIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVV 145
               L     I+  +G +     L   A   +   V+A D G    SSQ +V V V+
Sbjct: 497 PQLALASLVSINADNGQLFALRSLDYEALRAFEFGVRAADRGSPALSSQALVRVLVL 553


>gi|432952200|ref|XP_004085002.1| PREDICTED: protocadherin gamma-A11-like [Oryzias latipes]
          Length = 799

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 37  VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           V + V + D NDNAP        ++ P     G A   IVK+ ATD D G N E+T+S  
Sbjct: 216 VKIKVEVLDANDNAPVFSQSVYRVVVPENALKGTA---IVKVSATDKDKGANGEMTFSFS 272

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
           H ++     F ++P +G I  +G L     +Q+ I ++ +D GG +  + V++ V    N
Sbjct: 273 HHTDGAALLFNMNPHTGEITVSGVLDYEKTKQHEINIEVSDKGGLTDTSKVQIEVT-DEN 331

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +PV    +    + E +++N+ +A I +  L SG
Sbjct: 332 DNAPVINIISLSNPIPEDSALNTVIAMINIKDLDSG 367


>gi|229472138|gb|ACQ72597.1| protocadherin-19 isoform 2 [Danio rerio]
          Length = 1012

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 91/193 (47%), Gaps = 12/193 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           LVV K  LDR+     ++ F++ A +      S  V L + + D NDN P    P+    
Sbjct: 186 LVVEK-TLDRE--TQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVN 242

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            ++       ++ + ATD D G N E+ YS I  VSN     F+IDP++GVI   G L  
Sbjct: 243 VLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVITVNGVLDH 302

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP---VFQQNTYDVNVSEGASINS 172
            E   + I VQA D G  S     +V V V   N  +P   +  +N+  V VSE A +  
Sbjct: 303 EELHIHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVSENAPLGY 362

Query: 173 TVATITVSRLASG 185
            +A + VS   SG
Sbjct: 363 VIALVRVSDNDSG 375



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 15/183 (8%)

Query: 2   LVVSKENLDRDP---PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
           L+++K+ +DRD      P  F    I+ E    +  + V + + + D+NDNAPR P    
Sbjct: 76  LLITKQKIDRDAVCRQTPKCF----ISLEVMSNSMEICV-IKIEIIDVNDNAPRFPTNHI 130

Query: 58  PIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRS---GVIET 112
            I+I    A      +E A+D D G N   TY+I      GL  K R D       V+E 
Sbjct: 131 DIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIKTRGDGSKIAELVVEK 190

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
           T       +Y+  + A D G       V++++ V   N  +PVF +  Y VNV E + IN
Sbjct: 191 TLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVNVLENSPIN 250

Query: 172 STV 174
           + V
Sbjct: 251 TLV 253



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 17/186 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQI 70
           F F+V A++      +   ++ + + D+NDN P +   PP+     E            +
Sbjct: 524 FEFKVSAKDGGDPPLTSNATVRIVVLDVNDNTPVM-TTPPLVNGTAEVSIPKNAGVGYLV 582

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +I+A D D G N  +TYSI   S   +  F ID  +G + TT      A   Y ITV A
Sbjct: 583 TQIKADDYDEGENGRLTYSI---SEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVA 639

Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            D G    S+   + + + P  N +  +   N   + +    SI + +  +T+  +A  C
Sbjct: 640 HDHGQTSLSASAYIVIYLSPDLNAQEQIGPVNLSLIFIIALGSI-AVILFVTMIFVAVKC 698

Query: 187 AIMNKE 192
              NKE
Sbjct: 699 KRDNKE 704


>gi|432107356|gb|ELK32760.1| Protocadherin-11 X-linked [Myotis davidii]
          Length = 821

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 70/147 (47%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + + D NDNAP      I     +      Q+ KI ATD D G NAEITY +    + 
Sbjct: 255 LLIKIKDENDNAPVFTQSFISTSVPENNSPGSQLTKISATDADTGRNAEITYLL---GDD 311

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+Y  TV A D G     T V V V V   N  SP
Sbjct: 312 APSEFNLDQRTGILTAMKKLDREKQEKYYFTVLAKDNGIPPLITNVTVLVTVLDQNDNSP 371

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E  S + TV  ITV+
Sbjct: 372 IFTHNEYNFYVPENLSRHGTVGLITVT 398



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L +++ DINDN P       I++
Sbjct: 4   LIVQKE-LDREEKD--TYVMKVKVEDGGFPQKSSTAILQISIADINDNHPVFTE-SEIEV 59

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     L 
Sbjct: 60  SIPENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNSSTGLITIKEPLD 119

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE AS
Sbjct: 120 REESPNHKLLVLASDGGLMPARAMVLVNVTDINDNVPSIDIRYIINPING-TVVLSENAS 178

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 179 LNTKIALITVT 189



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++P      
Sbjct: 427 VIRPNISFDREKQESYTFYVQAEDGGRVSRSSTAKVTINVVDVNDNKPVF-LVPSSNYSY 485

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + + +    +  + A DND G+NAE+ YSI   +  GL  F I+  +G I    K +
Sbjct: 486 ELVLPSTDPGTVVFTVVAIDNDTGMNAELQYSIVGGNARGL--FIINQTTGNITMKEKCV 543

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 544 LADLGLHRLVVKANDLGQPDS 564



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 11/159 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
           ++ + + LDR+     K+ F V+A++         V++ V + D NDN+P          
Sbjct: 324 ILTAMKKLDRE--KQEKYYFTVLAKDNGIPPLITNVTVLVTVLDQNDNSPIFTHNEYNFY 381

Query: 61  IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           +    +R   V  I  TD D G N+ +T SI  V++     F ID ++GVI         
Sbjct: 382 VPENLSRHGTVGLITVTDPDYGENSAVTLSILDVND----DFTIDSQTGVIRPNISFDRE 437

Query: 120 EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
           +Q  Y+  VQA D G  S  +  +V++ V   N   PVF
Sbjct: 438 KQESYTFYVQAEDGGRVSRSSTAKVTINVVDVNDNKPVF 476


>gi|317420089|emb|CBN82125.1| Cadherin-7 [Dicentrarchus labrax]
          Length = 768

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 17/151 (11%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDN P+    P     P     G    Q+   +A D   G NA++ YSI   
Sbjct: 115 FIIKVQDINDNVPQFQNEPYVSSIPEMCPTGTTVAQVTATDADDPMFGNNAKLIYSILQ- 173

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F ++P++G+I T+   +   A EQY + VQ  D    +GG SS T V VS+  
Sbjct: 174 ---GEPYFSVEPKTGIIVTSWPNMDREAREQYLVVVQVKDMLGLSGGYSSSTTVTVSLT- 229

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P FQ + Y   + E A++ +TV  I
Sbjct: 230 DVNDNGPTFQHHLYAFAIPENAAVGTTVGRI 260


>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
 gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
          Length = 4641

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 11/172 (6%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            ++NLDR+  +   +   +IA +      S   ++ +N+ DINDN P   +         E
Sbjct: 3187 EKNLDRETISI--YNLTLIAEDYGKPIMSSVANIVINILDINDNPPEFSL-RQYSSHVHE 3243

Query: 66   ARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
               Q   +  + AT  D+GVNAEI+Y  Y +S     KF I+  +GV+   G L   +  
Sbjct: 3244 NVTQGFDVCTVHATSKDIGVNAEISY--YIISGNEQRKFNINSSTGVLWVNGTLDYEKTK 3301

Query: 122  -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
             Y +TVQA D G      I  V++ +   N  +P F QN Y  +V E  +I+
Sbjct: 3302 FYFLTVQAIDGGSPPLSNIAYVNISIDDVNDNTPTFTQNNYRASVKEDVNID 3353



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V++ DINDN+P     +  +Q+         I ++ A DND G N+ ITYSI   S  
Sbjct: 1244 VVVSVLDINDNSPVFDQRVYKVQVPSTTNMNESIFQVHAIDNDDGENSRITYSI--KSGK 1301

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV 145
              +KFRID  SG I  T  L    ++ I+V+A D G   KS  T+V + V+
Sbjct: 1302 KKNKFRIDSFSGHIFFTKTLEPDSEFEISVKAEDNGIPKKSQTTLVNIGVI 1352



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 12/184 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
            +V  E LDR+  +  K+   ++ ++      S    + + ++D+NDNAP   +   + +I
Sbjct: 891  IVLSEQLDREQTD--KYELHIVVKDCGDPVLSAEAVVYILVDDVNDNAPIFGVQEYMFKI 948

Query: 62   QAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            +    R  +V  IEA D D+G NAEI +S+   +    + F+ID  SG I T G L    
Sbjct: 949  REDVPRGTVVAVIEAIDKDMGENAEILFSLKEDTQDK-NLFKIDKHSGAIRTEGYLNYEN 1007

Query: 121  Q--YSITVQATDTGGKSSQT----IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +++ + A D G  S       ++E+  V   N  +P F    Y+  + E     + V
Sbjct: 1008 RQVHNLVISAIDCGVPSLTADMPIVIEIIDV-NENRYAPEFDDFAYEGKIRENMPKGTLV 1066

Query: 175  ATIT 178
              IT
Sbjct: 1067 MNIT 1070



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 16/197 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQ 60
           ++ +++ LD +  +        I +   G+       + + + D+NDN P    M   I 
Sbjct: 415 MLYTQKQLDAETKSSYTLTVSAIDQADVGSRKQSSAKVKITIEDMNDNDPIFENMNKVIY 474

Query: 61  IQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I   E A   + K+ A D D G NA I+YSI   +N     F ID  SGVI+TT  LI  
Sbjct: 475 INENELAGSFVTKLTAKDRDSGENAYISYSI---ANLNEVPFEIDHFSGVIKTTN-LIDY 530

Query: 120 E----QYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQ-NTYDVNVSEGASIN 171
           E     Y++ ++A+D G    + ++  +E+ +V   N   P F++ N Y   V + A I 
Sbjct: 531 ETMRRNYTLLIRASDWGLPYRRQTEIALEI-IVKNVNDNRPQFERVNCYG-KVIKSAPIG 588

Query: 172 STVATITVSRLASGCAI 188
           S V TI+   L  G  I
Sbjct: 589 SEVFTISAIDLDMGDVI 605



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 12/166 (7%)

Query: 20   RFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-ARRQ--IVKIE 74
            +++++A  + G          + + +NDINDNAP   M P  ++   E A+ Q  + K+ 
Sbjct: 3093 KYKILAHVQDGKEFIRECVSEIIITVNDINDNAPIFSM-PNYRVSIQEDAQLQTLVTKVH 3151

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
            ATD D G+N +I YS+     T    F I   +G+I+    L       Y++T+ A D G
Sbjct: 3152 ATDKDFGINRKIKYSLI---GTNSDYFEISKSTGIIKLEKNLDRETISIYNLTLIAEDYG 3208

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 ++  + + +   N   P F    Y  +V E  +    V T+
Sbjct: 3209 KPIMSSVANIVINILDINDNPPEFSLRQYSSHVHENVTQGFDVCTV 3254



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 12/174 (6%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RR 68
            D      +   + A++      S  V + + + + NDN P L   P   +   E    + 
Sbjct: 1111 DAETKNFYWLTLCAQDNAIVPLSNCVKVYIEVENENDNIP-LTTKPVYYVNVTEGTSGKT 1169

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
            +I+++ A D D+     ITYSI   ++ G   F I+P +G+++TT + +  E   ++ + 
Sbjct: 1170 EIIQLRAIDPDIDPLQTITYSITSGNHVGY--FDIEPHTGLLKTTERKLDRENQSEHILE 1227

Query: 126  VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V  +D G    +S T V VSV+   N  SPVF Q  Y V V    ++N ++  +
Sbjct: 1228 VSISDNGSPILTSTTRVVVSVL-DINDNSPVFDQRVYKVQVPSTTNMNESIFQV 1280



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 11/145 (7%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
           L + + D NDN P L   +  +++     +  +V  + ATD DLG+NAEITY++      
Sbjct: 822 LPITITDANDNPPVLQKSLATLRLTENAPKGSVVYCVHATDADLGINAEITYTL----AV 877

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
              +F I+  +G I  + +L     ++Y + +   D G    S++ +V + +V   N  +
Sbjct: 878 EFKEFTINKTTGCIVLSEQLDREQTDKYELHIVVKDCGDPVLSAEAVVYI-LVDDVNDNA 936

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           P+F    Y   + E     + VA I
Sbjct: 937 PIFGVQEYMFKIREDVPRGTVVAVI 961



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 26/164 (15%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAP-------RLPMIPPIQIQAGEA 66
            KF F  +     G   S P+S    + ++++D+NDN P       R  +   + I     
Sbjct: 3301 KFYFLTVQAIDGG---SPPLSNIAYVNISIDDVNDNTPTFTQNNYRASVKEDVNIDV--- 3354

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
               I+ ++ATD D  +N  I Y+I  V    L +F I+  +G I     L       Y++
Sbjct: 3355 --PIIDVKATDEDSNLNGIIKYNI--VKGDSLSQFSINISNGTISLARPLDRETISDYAL 3410

Query: 125  TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             VQA D G   +    +V V+V+   N  +PVF Q  Y V + E
Sbjct: 3411 EVQACDLGIPERCDSVLVNVAVLDA-NDNAPVFSQANYSVVLQE 3453



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+ P     +I     ++     ++V++ A D D G NAE+ YSI    N 
Sbjct: 1557 IIVNVHDHNDHYPEFTTKIIQSKVPESAAIGSKLVQVTAIDRDSGKNAELRYSII-TGNV 1615

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G   F ID   G+I     L     ++Y + V+A D G    SSQ  V + ++   +   
Sbjct: 1616 G-SMFEIDSTFGIIYLAASLDINKMQEYMLQVKAVDLGQPPLSSQVPVHI-IITMSDNDP 1673

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F  +   + + E  SI S V  +
Sbjct: 1674 PKFFADVISLEMFENLSIGSFVTQV 1698



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 9/137 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            S+ +++ DINDN P    +P    +  G  +  I+ K++A D D   N E+ Y +    N
Sbjct: 2080 SVYISVQDINDNCPMFVNMPYYASVSVGFTKGTIIMKVKAIDLDSAENGEVRYEL-KKGN 2138

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
              L  F+ID ++G + +  + I G   +Y +TV A D    S  T V V  +   +   P
Sbjct: 2139 GEL--FKIDRKTGEL-SIKQSIEGHNRKYELTVAACDGAVISCCTEVPVQ-IKVIDRSMP 2194

Query: 154  VFQQNTYDVNVSEGASI 170
            +F++  Y V+V E   +
Sbjct: 2195 IFEKQFYSVSVKEDVEM 2211



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           IEA D DLG N ++ ++I       +  FRIDP SG ++  G L      +Y + +   D
Sbjct: 753 IEARDRDLGYNGKLVFAIADGDYDSV--FRIDPDSGELQIIGYLDRERLSEYILNITVYD 810

Query: 131 TGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G   KS   I+ +++    N   PV Q++   + ++E A   S V  +
Sbjct: 811 LGHPTKSDSKILPITITDA-NDNPPVLQKSLATLRLTENAPKGSVVYCV 858



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-IVKIEATDNDLGV 82
           AR K  ++     ++ V + D ND +P   P    + +     +   I+K+ A D DLG+
Sbjct: 114 ARGKNISSYETETAIHVQVLDRNDLSPLFYPTEYAVTVPEDTPKHHSILKVIADDADLGI 173

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQ 137
           N EI YS    S +    F I P +G I    +L   E   Y +TV A D G   +Q
Sbjct: 174 NGEIYYSFLIDSES----FAIHPTTGDITILRQLNYAENSHYELTVLANDRGSAINQ 226



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 5/133 (3%)

Query: 41   VNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +++ D NDN P+    +      +  +    I+KI ATD D G N ++ Y     SN   
Sbjct: 2805 IHVTDENDNYPKFDNTIYNADVAENTDKVASILKITATDEDTGSNGDVRYYFDDESNGIR 2864

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
            + F ID  +G I     L      ++++ V ATD G     + V VS+ +   N   P F
Sbjct: 2865 NVFDIDIYTGWITLLSSLDREVQSEFNLKVIATDNGHPKHDSKVPVSIKIIDYNDNGPQF 2924

Query: 156  QQNTYDVNVSEGA 168
            +     +++SE A
Sbjct: 2925 KLPNDTISISENA 2937



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 20/180 (11%)

Query: 11  RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            D   P +F F+ +  +      +VP+  T  + +++     +P   PI +        +
Sbjct: 332 EDFGTPSRFTFKTVTIQILPEIKNVPI-FTQEIYEVS-----IPETAPINMP-------V 378

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
           ++++ +D D+G  A +   +   +  G  +FRI+P SG++ T  +L A  +  Y++TV A
Sbjct: 379 IRLKVSDPDMGKFALVYLEVVGGNEGG--EFRINPDSGMLYTQKQLDAETKSSYTLTVSA 436

Query: 129 TDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D    G   Q+  +V + +   N   P+F+     + ++E     S V  +T     SG
Sbjct: 437 IDQADVGSRKQSSAKVKITIEDMNDNDPIFENMNKVIYINENELAGSFVTKLTAKDRDSG 496



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYS 123
             +I+ ++A DND G  A + Y I   S      F I+  +G I  T K+       ++Y 
Sbjct: 2525 HEIITVKAIDNDFGQYASVYYEI--ASEEMKKYFEINRNTGSI--TSKVAFDRELKDEYV 2580

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + ++A D G K     + VS +   N  SP F    Y + +S     N TV T+
Sbjct: 2581 LQLKAIDGGSKFGFATLRVS-IKDVNDNSPQFFVKEYKIVISSSIKPNDTVLTV 2633



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            FRI+P +GVI     +     + +++T++ T+   +SS+  + V V+   N   P F Q+
Sbjct: 1719 FRINPSTGVIAINANVDYELNKIFNLTIKGTNMASQSSRQNLIVHVLDA-NDNVPKFLQS 1777

Query: 159  TYDVNVSEGASINSTVATI 177
             Y   VSE AS+ S V  I
Sbjct: 1778 EYIGRVSEAASLGSYVQII 1796


>gi|11142063|gb|AAD43762.2|AF152501_1 protocadherin beta 8 [Homo sapiens]
          Length = 801

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 10/182 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q  E   
Sbjct: 201 LDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQ-PFYRVQISEDSP 257

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
               +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L     + Y 
Sbjct: 258 ISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFEKFQSYE 317

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  +VS L 
Sbjct: 318 VNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALFSVSDLD 375

Query: 184 SG 185
           SG
Sbjct: 376 SG 377


>gi|395511793|ref|XP_003760136.1| PREDICTED: cadherin-19 [Sarcophilus harrisii]
          Length = 771

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 19/187 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + + + LDR+     K R QV+     G          + + DINDN P+  +  P + +
Sbjct: 99  ITAIKKLDREEKAYYKLRAQVL-NVNTGKPVEPESEFVIKVLDINDNKPQF-LDGPYETR 156

Query: 63  AGEARRQ---IVKIEATDND---LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             E   +   ++++ ATDND    G NA + Y++      G   F ++P +G++  + ++
Sbjct: 157 IPEMSPEGTSVIQVTATDNDDPSYGNNARLIYTLLQ----GRPYFTVEPTTGILRISSQM 212

Query: 117 I--AGEQYSITVQATDT----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A +QY + VQATD     GG S  T V +++    N   P+FQ   Y +NVSE A +
Sbjct: 213 DREAKDQYLVVVQATDMLGLPGGLSGTTTVTINL-SDVNDNRPIFQLGLYHMNVSESAPV 271

Query: 171 NSTVATI 177
            +++  I
Sbjct: 272 GTSIGII 278



 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 23/157 (14%)

Query: 38  SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++T+NL+D+NDN P  +L +      ++      I  I A D+D+G NA++ YSI     
Sbjct: 241 TVTINLSDVNDNRPIFQLGLYHMNVSESAPVGTSIGIIMAEDSDIGENAKMNYSI----E 296

Query: 96  TGLHKFRI----DPRSGVIETTGKLIAGE--QYSITVQATDT---------GGKSSQTIV 140
            G H F I    + + G++    KL   +  QYS+  + T++               TI+
Sbjct: 297 DGSHIFDIITNNETQEGIVVLKKKLDYEQQRQYSVRAKVTNSFIDEYFPKDENSGQTTII 356

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ V        PVF    Y + V+E     S V ++
Sbjct: 357 KIRVEDA--DEPPVFSHLEYLMEVAEETPFGSYVGSV 391


>gi|120537643|gb|AAI29244.1| Wu:fc83e05 protein [Danio rerio]
          Length = 1078

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 91/193 (47%), Gaps = 12/193 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           LVV K  LDR+     ++ F++ A +      S  V L + + D NDN P    P+    
Sbjct: 181 LVVEK-TLDRE--TQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVN 237

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            ++       ++ + ATD D G N E+ YS I  VSN     F+IDP++GVI   G L  
Sbjct: 238 VLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVITVNGVLDH 297

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP---VFQQNTYDVNVSEGASINS 172
            E   + I VQA D G  S     +V V V   N  +P   +  +N+  V VSE A +  
Sbjct: 298 EELHIHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVSENAPLGY 357

Query: 173 TVATITVSRLASG 185
            +A + VS   SG
Sbjct: 358 VIALVRVSDNDSG 370



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 15/183 (8%)

Query: 2   LVVSKENLDRDP---PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
           L+++K+ +DRD      P  F    I+ E    +  + V + + + D+NDNAPR P    
Sbjct: 71  LLITKQKIDRDAVCRQTPKCF----ISLEVMSNSMEICV-IKIEIIDVNDNAPRFPTNHI 125

Query: 58  PIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRS---GVIET 112
            I+I    A      +E A+D D G N   TY+I      GL  K R D       V+E 
Sbjct: 126 DIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIKTRGDGSKIAELVVEK 185

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
           T       +Y+  + A D G       V++++ V   N  +PVF +  Y VNV E + IN
Sbjct: 186 TLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVNVLENSPIN 245

Query: 172 STV 174
           + V
Sbjct: 246 TLV 248



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 17/186 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQI 70
           F F+V A++      +   ++ + + D+NDN P +   PP+     E            +
Sbjct: 519 FEFKVSAKDGGDPPLTSNATVRIVVLDVNDNTPVM-TTPPLVNGTAEVSIPKNAGVGYLV 577

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +I+A D D G N  +TYSI   S   +  F ID  +G + TT      A   Y ITV A
Sbjct: 578 TQIKADDYDEGENGRLTYSI---SEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVA 634

Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            D G    S+   + + + P  N +  +   N   + +    SI + +  +T+  +A  C
Sbjct: 635 HDHGQTSLSASAYIVIYLSPDLNAQEQIGPVNLSLIFIIALGSI-AVILFVTMIFVAVKC 693

Query: 187 AIMNKE 192
              NKE
Sbjct: 694 KRDNKE 699


>gi|403284522|ref|XP_003933617.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2, partial [Saimiri boliviensis boliviensis]
          Length = 2897

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 216 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 268

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T G
Sbjct: 269 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 328

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 329 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 388

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 389 PGAPVLRVTAS 399



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 756 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 807

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 808 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 866

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 867 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 921



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 551 YSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 609

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 610 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 660

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 661 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 717



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 673 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 727

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 728 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 786

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 787 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 820



 Score = 38.9 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 355 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI 413

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVV 145
             +S     +F +D ++G ++    L     ++Y++ V+A D G     +   +V V V+
Sbjct: 414 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVL 471

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              N  +P+F    +   V E   +   V
Sbjct: 472 -DINDNAPIFVSTPFQATVLESVPLGYLV 499



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 847 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 904

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 905 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 962

Query: 120 E--QYSITVQATDTGGKSSQTI 139
           +  +Y + +QAT     S  T+
Sbjct: 963 DRPEYVLVIQATSAPLVSRATV 984


>gi|260798696|ref|XP_002594336.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
 gi|229279569|gb|EEN50347.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
          Length = 2488

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--- 59
            + + ++LDR+      +RF  +A +++G        + ++L DINDNAP     P +   
Sbjct: 1012 IYASKSLDRE--ERAVWRFIALATDEKGRGLVGFSDVAISLGDINDNAPEFNDEPYVGSV 1069

Query: 60   --QIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETT-GK 115
                 AG +   +   +A D D+G NA++TY I  +     ++ FRID  +G I TT G 
Sbjct: 1070 LENTAAGTSVMTVTATDADDPDVGRNAKLTYRITKNAKQNRVNLFRIDRNTGKIFTTVGN 1129

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L     ++Y++ V+A D  G      V V  V   N   P F Q  Y   +SEG   +  
Sbjct: 1130 LDRETTKEYTLVVRAEDGDGLWGTGTVTVQ-VGDINDNPPAFNQRIYSTTMSEGLGKDGI 1188

Query: 174  VATITVS 180
            V T+  S
Sbjct: 1189 VTTVAAS 1195



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 5/98 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQA 128
           + ++ A D DLG NAE    +Y +S+ G  +F +D  +G + T+G    A ++Y +  +A
Sbjct: 22  VYQLTAEDKDLGENAEFQAFLY-ISSDGDGRFELDTSTGDVTTSGLPFTANQEYIVHGRA 80

Query: 129 TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            DTG   S   V VS++ G   R P F Q TYDV V E
Sbjct: 81  RDTGRNESPQAV-VSIIAG--NRPPQFMQQTYDVTVPE 115



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 33/200 (16%)

Query: 1   YLVVSKENLDRDPPNPG----KFRFQVIAREKQGTAASVPVSLT------VNLNDINDNA 50
           +++ +K+ + R   NP      +   V A +    A+  P SLT      V +NDIN+N 
Sbjct: 352 FVIDAKDGIIRLSDNPSLQGSHYTLNVTATDDN--ASGGPGSLTGTAVVVVGINDINNNK 409

Query: 51  PRL-------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
           P         P +P  Q     +   ++++ A+D D G N  +TYSI H  ++    F I
Sbjct: 410 PDFTQCAEYVPSVPEGQ----PSGTFVIQVTASDADQGSNGRVTYSIVHREDSET-MFNI 464

Query: 104 DPRSGVIETTGKLIAGE--QYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQ 157
           D  SG I T       E  ++++TV ATD          Q IV ++ V   N   PVF+ 
Sbjct: 465 DADSGEISTAVVFDREERREHAVTVTATDNADNPLIGVCQLIVHITDV---NDNDPVFEN 521

Query: 158 NTYDVNVSEGASINSTVATI 177
           N Y   +SE  +++++   +
Sbjct: 522 NKYAAVLSENTALHTSFLRV 541



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 6/144 (4%)

Query: 39  LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V++ D+NDN P         +  +        +++ A D D+G NAEI YS+   S  
Sbjct: 505 LIVHITDVNDNDPVFENNKYAAVLSENTALHTSFLRVAAQDADMGTNAEILYSL---SEE 561

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
                 ID ++G +     +   ++    V ATD GG+S+   ++V++    N   P+++
Sbjct: 562 VPQYLGIDRQTGWLYVKSAISQTQRIIRRVIATDGGGRSTSVRLDVAITDVEN-EPPMWE 620

Query: 157 QNTYDVNVSEGASINSTVATITVS 180
           +    V + E   I+  VAT+  S
Sbjct: 621 REYPAVTIPENTPIDQVVATVKAS 644



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 30/184 (16%)

Query: 20  RFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV--KI 73
           RF++  R +   AA +P++    + + L D+ND  P           A ++ +  +  ++
Sbjct: 696 RFELKIRAEN--AARIPLAAYTIVEIRLTDVNDEVPDFTAKSYAMSVAEQSPKGTLVGQV 753

Query: 74  EATDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            A D D G   ++TYSI    +  L    KFRIDP +G + T       ++  Y + V+A
Sbjct: 754 TAVDADTGDAGKVTYSISPDPDPSLRDWEKFRIDPSTGEVFTKDMFDREKKSFYLLEVKA 813

Query: 129 TDTGGKSSQTIVEVSVVPGPNTR--------------SPVFQQNTYDVNVSEGASINSTV 174
            D G  S +  VE+S V  PN+R              SP F +  Y+ +V E   +  +V
Sbjct: 814 ED-GAVSDR--VELSNVNIPNSREAYVRISISDVNDNSPTFPRTQYEASVDEDKDVGYSV 870

Query: 175 ATIT 178
            T+T
Sbjct: 871 VTLT 874



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA 66
            NLDR+        + ++ R + G       ++TV + DINDN P     I    +  G  
Sbjct: 1129 NLDRETTK----EYTLVVRAEDGDGLWGTGTVTVQVGDINDNPPAFNQRIYSTTMSEGLG 1184

Query: 67   RRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--- 120
            +  IV  + A+D D+G NA + YSI  V     ++FR+D     G++    ++   E   
Sbjct: 1185 KDGIVTTVAASDADVGDNARLFYSI--VGGNRNNQFRMDNSDNKGIVRVNRRVDYEEPTQ 1242

Query: 121  -QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             ++++T++  D    S    V ++V+   N   PVF    Y+  + E A++ + +  ++ 
Sbjct: 1243 RKFNLTLEVRDLDFTSRGYCV-INVL-DYNDNPPVFNPVYYEKEIYENATVGTLLRILSA 1300

Query: 180  SRLASG 185
            +   +G
Sbjct: 1301 TDRDTG 1306



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR 67
            +D + P   KF   +  R+   T+    V   +N+ D NDN P   P+    +I      
Sbjct: 1235 VDYEEPTQRKFNLTLEVRDLDFTSRGYCV---INVLDYNDNPPVFNPVYYEKEIYENATV 1291

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
              +++I  ATD D G NA   YSI   S+    +F I  ++G++ T  K +  E   Q+ 
Sbjct: 1292 GTLLRILSATDRDTGNNAVFKYSINPSSDPD-QQFLIGAQNGIL-TVNKALDRETLPQHR 1349

Query: 124  ITVQATDTG 132
            +T+QATD G
Sbjct: 1350 LTIQATDIG 1358



 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 17/174 (9%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVK 72
           ++   V A E      S  V + V + DIND  P      PI  Q        + + I++
Sbjct: 170 QYTLSVEATETGVNPMSSIVQVRVTVADINDCTPEFAN--PIYSQRDVVENIPSTKAILQ 227

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQAT 129
           + A+D D   N  ITYS+    +   H FRI    G I    +L   +    Y   V+A 
Sbjct: 228 VSASDCDSDENQRITYSV----DDDAH-FRI-ASDGTIYPNSQLDYEVPNNMYEFLVKAV 281

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           D G         V V +   N   PVF Q TY   V+E A     VAT+  + +
Sbjct: 282 DHGTPVLTGSATVRVRMANINDEPPVFSQRTYTTFVAEDAEPGGLVATVHATDM 335



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 32/184 (17%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLT-------------VNLNDINDN 49
           V +K+  DR+     K  F ++  + +  A S  V L+             ++++D+NDN
Sbjct: 793 VFTKDMFDRE-----KKSFYLLEVKAEDGAVSDRVELSNVNIPNSREAYVRISISDVNDN 847

Query: 50  APRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
           +P  P     Q +A      +    +V + A D D G NA++ Y I   +  G+  F + 
Sbjct: 848 SPTFPRT---QYEASVDEDKDVGYSVVTLTANDEDEGANAKLRYQITTGNVGGV--FDVV 902

Query: 105 PRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
           P  G I     L   A ++Y + + A+D  GK+  T      V   N   P F +N Y  
Sbjct: 903 PEIGTIVVAAPLDFEAVQEYELQLVASD--GKNENTTKVNIKVNNINDEEPEFTRNEYTG 960

Query: 163 NVSE 166
           ++ E
Sbjct: 961 SIRE 964


>gi|61162138|dbj|BAD91057.1| Le-cadherin [Ligia exotica]
          Length = 3009

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  ++  V A E  G   S  V LT+ + D+NDN P+  + P  Q   
Sbjct: 632 LAKELDFEDVTQPHIYQLVVTATEDSG-GFSTSVDLTIKVTDVNDNPPKFDL-PDYQAHN 689

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI YS+          FR+D + G+I     L A 
Sbjct: 690 IDEDIPIGSSILRVKAKDDDAGTNAEIVYSVSD------EHFRVDNK-GIIYNDKTLDAD 742

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           +    Y  TV A D G    +    + +     N   P+F Q  Y  NV E A  ++ V 
Sbjct: 743 DNNAYYEFTVTAIDRGEPPKEGTATIRIYTKNKNDEKPMFSQQVYTPNVDENAGRSTLVT 802

Query: 176 TITVS 180
           T+  S
Sbjct: 803 TVVAS 807



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S TV + DINDN P       I+   Q       I+++ A+D D   N  + Y++   +
Sbjct: 986  CSFTVEITDINDNPPLFDRQKYIENVKQDTNVGTNILRVSASDEDADNNGAVVYNLTAST 1045

Query: 95   NTG-LHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
            N G L  F I P SG I T  + +  E Y + V +TD G    +S  +V+++VV   N R
Sbjct: 1046 NPGDLEYFDIQPESGWI-TLRRPLDRELYVVRVVSTDKGSPPLNSAVLVQLNVVDRAN-R 1103

Query: 152  SPVFQQNTYD-VNVSEGASINSTVATITVS 180
             PV+ Q  Y  +N+ E  S+  T+ ++  S
Sbjct: 1104 PPVWDQRVYGPINIFENTSVGHTIFSVKAS 1133



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 25/182 (13%)

Query: 3    VVSKENLDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            +  ++ LDRD P  G+  +RF V A+++ G        + VNL DINDNAP  P +    
Sbjct: 1504 IFVRKPLDRDHPK-GRPTWRFTVFAQDEGGNGLVGYADVQVNLKDINDNAPIFPQMVYYG 1562

Query: 61   --IQAGEARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIET 112
               + G     ++ + A D D    G NA+++YSI       +T    F I+P +GVI+T
Sbjct: 1563 NVTENGTQGMVVMTMTAEDYDDPNEGTNAKLSYSIEKNVIDESTATPIFEIEPETGVIKT 1622

Query: 113  TGKLIAGEQ---YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
                +  E+   YSI V A D G     G +S  + +++ +P      P F ++ +   V
Sbjct: 1623 AVCCLDREKTPDYSIQVVAVDGGALKGTGTASIRVRDINDMP------PKFTKDEWVTEV 1676

Query: 165  SE 166
             E
Sbjct: 1677 DE 1678



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V + D+NDN P          +  E+      ++ + ATD D G N ++ YSI    N
Sbjct: 878  VVVFITDVNDNKPVFTDCASYHAKVEESAPNGSPVITVHATDEDKGGNGQVRYSIVQQPN 937

Query: 96   TGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                KF ++P +G + TT K+       G+  S+TV+ATD G  S + +   +V +   N
Sbjct: 938  QKGTKFTVNPETGEV-TTNKVFDREGEDGKFVSVTVKATDNGDPSLEGVCSFTVEITDIN 996

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P+F +  Y  NV +  ++ + +  ++ S
Sbjct: 997  DNPPLFDRQKYIENVKQDTNVGTNILRVSAS 1027



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 14/159 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA-RRQIVKIEATDNDLGV-NAEITYSIYH-VS 94
            ++ V L D+ND  P         +  GEA   ++ ++ A D D    N E+ Y I   V 
Sbjct: 1208 TIYVVLEDVNDEIPLFTEREQETVLEGEAIGTKVTQVNAIDKDGTYPNNEVLYRIVDSVR 1267

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--------GKSSQTIVEVSV 144
            N G   F I  R+G I T  +    E+  Y++ V+A D          G+ +     + +
Sbjct: 1268 NEGRDHFEIRERTGEIFTRVEFDREEKQAYALEVEARDGAPSARPNQNGRPNTVTKYIRI 1327

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             +   N   P F +  Y+  V E   I  TV T+T   L
Sbjct: 1328 GIADKNDNLPYFDKTLYEAEVDENEDIQHTVLTVTAKDL 1366



 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 14/148 (9%)

Query: 45   DINDNAPRLPMIPPIQIQAGEARR----QIVKIEATDNDLGVNAEITYSI----YHVSNT 96
            D+ND  P+      I     E  R    +I++++A D D     +I Y +     HV N 
Sbjct: 1431 DVNDLPPKFERNSYIATIEEEFDRNLPMKILQVKANDGDKDRKQDIVYFLTGQGIHVDNP 1490

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               KF ++  +G I     L          +  TV A D GG       +V V +   N 
Sbjct: 1491 DKSKFEVNRTTGAIFVRKPLDRDHPKGRPTWRFTVFAQDEGGNGLVGYADVQVNLKDIND 1550

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P+F Q  Y  NV+E  +    V T+T
Sbjct: 1551 NAPIFPQMVYYGNVTENGTQGMVVMTMT 1578



 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLT---VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVK 72
            +F+ QV  + +   A    V+ +   V L DINDN P+   P I     +  E  + + +
Sbjct: 1748 RFKIQVNDKGEDNDAEKYHVAYSWVKVELRDINDNKPQFIKPNIEVPVFENAEVGKNLEQ 1807

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
             +A D D G N++++Y+I   S+    +F ID  +G ++    L   E  ++S+ + A D
Sbjct: 1808 FKAEDPDQGGNSKVSYAIDRASDR-RRQFTID-DTGTVKIQRSLDREENPRHSVKILAID 1865

Query: 131  TGGKSSQTIVEVSVV 145
             G  +      ++V+
Sbjct: 1866 DGTPAKTATATLTVI 1880



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 12/79 (15%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQ 60
            + +LDR+  NP +   +++A +    A +   +LTV + DINDNAPR      P++P  Q
Sbjct: 1846 QRSLDREE-NP-RHSVKILAIDDGTPAKTATATLTVIVQDINDNAPRFLKDYRPVLPENQ 1903

Query: 61   IQAGEARRQIVKIEATDND 79
                 + R+IV++ ATD+D
Sbjct: 1904 -----SPRKIVEVLATDDD 1917


>gi|332211631|ref|XP_003254918.1| PREDICTED: protocadherin-16 [Nomascus leucogenys]
          Length = 3297

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 421 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDHHLYRP 478

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+  V     H F IDP SG+I T 
Sbjct: 479 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSL--VPGAHSHWFSIDPTSGIITTA 532

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  +TV ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 533 ASLDYELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 592

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 593 GTCFLQVTATDADSG 607



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2343 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2397

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2398 SATDRDSGANGHISYHLASPAS----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2453

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2454 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLPHYHVAVTEDLPPGSTLLTL 2503



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1820 FQLRIEARDGGHPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1878

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1879 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTATALDREQCPSYTFSVSAVDGAA 1935

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1936 AGPLSTTVSVTITVRDVNDHAPTF 1959



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2138 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2196

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2197 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2254

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2255 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2309



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1634 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTYG-- 1686

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1687 GVSS---ESFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDE 1743

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1744 NDHAPTFGSAHLSLEVPEG 1762



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 881  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 933

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 934  AGGGGAFTVDPTAGHVRLMRPLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 993

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 994  GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1021



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 206 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 262

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D GVN  +TY I    + G   F ID  +G++     L
Sbjct: 263 VSESLGPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFFIDAHTGLLRLERPL 319

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 320 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 379

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 380 PGQLVARISVS 390



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1123 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1181

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
              D G   +S+   V V+V+   N  SP F Q
Sbjct: 1182 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1212



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1535 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYWL---A 1584

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L   +  ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1585 SGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1643

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E +   +++ T+
Sbjct: 1644 EAPTFQQQEYSVLLRENSPPGTSLLTL 1670



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 105 VLDREQRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 151

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 152 PEHTAFGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGAPVPELVV 208

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 209 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 267

Query: 169 SINSTVATITVSRLASGC 186
              S V  +  S   +G 
Sbjct: 268 GPGSPVLQVFASDADAGV 285



 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2671 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2727

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2728 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2781

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2782 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2825



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1734 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1793

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1794 SG--AFVLDFTSGEFGTMRPLDREVEPAFQLRIEARDGGHPALSATLLLTVTVLDANDHA 1851

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1852 PAFPVPAYSVEVPE 1865


>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
          Length = 4971

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            ++S   LDR+      ++  V+A +    +G ++S  VS+TV   DINDN PR    P +
Sbjct: 2394 IISSALLDRE--ERANYQLLVVATDGGQPKGLSSSATVSVTVA--DINDNPPRFHHHPYV 2449

Query: 60   -QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              I A  A   +V  +  TD D G NA++ YS+         KF+IDP  G I  + +L 
Sbjct: 2450 THIPASTAAGALVFAVTVTDEDAGSNAQLQYSLM---GRNAEKFKIDPVRGAITASERLT 2506

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               + ++ V+  D G   ++  T V V  VPG N   P+ +      +  E    N  V 
Sbjct: 2507 GSSEVTLAVRVKDGGTNPRTDSTTVTVRFVPGGNF--PIIKVKERLFSFPENQPNNHVVT 2564

Query: 176  TITVSRLASG 185
            T+T S L  G
Sbjct: 2565 TVTGSSLRGG 2574



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +  ++IA +      S    L++++ D NDN+P  P    + +   E  R    +V + A
Sbjct: 1257 YLLKIIADDAGDVPLSSSCMLSISILDENDNSPSFPK-SSLSVDVLENMRIGDLVVSVTA 1315

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD D G NA+ITYSI  ++N G   F I P +G I    KL    Q  Y + + A D G 
Sbjct: 1316 TDADSGQNADITYSITAINNHG--TFSISPNTGSIFLVKKLDYETQSFYKLNITAKDNGR 1373

Query: 134  KS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + S +I  V  V   N   PVF       ++ E   ++++V TIT
Sbjct: 1374 PARSSSIPVVVYVRDFNDNPPVFAPGDIFKSIPENLPVSASVLTIT 1419



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 14/175 (8%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKI 73
            G ++ +V+AR  + T  +    + + + D+NDNAPR  +     + A E       I + 
Sbjct: 836  GFYQLKVVARAGEITGEAF---VNITVRDLNDNAPRF-LHAAEHVSAVENWSTGHIIFQA 891

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-EQYSITVQATDTG 132
            +A+D D G+N  + YS+   +  GL  F I  + G+I  TG L A    Y + V A+D G
Sbjct: 892  KASDPDEGLNGVVVYSLKE-NPKGL--FHIHEKHGLITLTGSLKASTNSYEVEVTASDMG 948

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               ++S   + +SV    N  SP+F Q +Y+V + E   +NS    +  +   SG
Sbjct: 949  VPQRTSSLSLIISVY-DVNDNSPMFDQLSYEVIILESEPVNSRFFKVEATDKDSG 1002



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQ--IQAGEARRQIVK 72
            +   +V A +    A +  VS+T+ + D+NDN P        P +Q  + +G     +V+
Sbjct: 3136 QHELRVSAIDGGWIAKTSYVSVTIQVTDVNDNPPIFDPDEYFPTVQENVPSGTT---VVR 3192

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + ATD D G NA + Y I   S++ L  F IDP +G+I T G L   A + Y +TV+A +
Sbjct: 3193 MNATDRDSGPNAVMAYVI-QSSDSDL--FVIDPNTGIITTQGFLDYEAKQVYHLTVKAFN 3249

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               +   +   V++ + G N   P F    Y   VSE A   + V  +  S    G
Sbjct: 3250 IPDEDRCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTVVGEVFASDRDQG 3305



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 14/150 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHV 93
           + + L DINDN P   +  P+Q  A     +     +  + A+D DLG N  + Y I   
Sbjct: 652 VNITLWDINDNRP---VFYPVQYFASVKENEPPGSYVTTVLASDRDLGRNGTVKYVI--- 705

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           S+    KF I   +G I T   L   E+  Y + V+ATD GG SS T   V+V V     
Sbjct: 706 SSGDTTKFHIHSNTGKITTLVALDREEKTAYQLQVRATDGGGLSSHTHAFVTVTVTDTQD 765

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             PVF Q  Y   + E  S  + + T++ +
Sbjct: 766 NPPVFSQENYSFVMFENVSPGTVIGTVSAT 795



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 27/193 (13%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPM--IPPI 59
           +VS   LDR+      F   +I  E +G       + + V + DINDN P          
Sbjct: 187 LVSTGGLDRELT---PFYQLLIEVEDKGVPKKFGYLQVNVTIQDINDNPPVFEQDQYHSS 243

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLI 117
             +       I++I A+D D G NAEI Y    + + G   F+IDP++G  VI+ +    
Sbjct: 244 VFEDAAVGSSILQITASDQDEGANAEIRY----ILDEGT-PFQIDPKTGTIVIKESLDFE 298

Query: 118 AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVSEG 167
           + ++YS+T+ A D G     G++  TI  + V    N   PV     F   +   +V E 
Sbjct: 299 SKKEYSLTIHAADKGVPSLSGRTETTIKLLDV----NDNDPVVKFRYFPTTSKFASVDEN 354

Query: 168 ASINSTVATITVS 180
           A I + VA +TVS
Sbjct: 355 AQIGTVVALLTVS 367



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 41   VNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + L DINDN P     +  + I+       +I+++ A D D G NA +TY+I   ++   
Sbjct: 1707 ITLQDINDNPPVFANDVLDVTIEENIIDGFKIMQLTAKDADEGPNALVTYTIISGAD--- 1763

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP SG +  T KL      +YS+ V+A D G +SS   + ++ V   N  +P F 
Sbjct: 1764 DSFRIDPESGDLIATKKLDRERRSKYSLLVRA-DDGKQSSDMRLNIT-VKDVNDHTPKFS 1821

Query: 157  QNTYDVNVSEGASINSTVATITVS 180
            + TY  ++ E  +  S V  I  S
Sbjct: 1822 RPTYSFDIPEDVTPGSIVEVILAS 1845



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 9/163 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EA 66
            LDR+      +   V+A +K     S  + +T+ + D+NDN P     I  I+++     
Sbjct: 2091 LDRE--ELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEENILT 2148

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               ++++ A+D D G N +I +SI   S      FRID  +GVI    +L    +  YS+
Sbjct: 2149 GTDVIQVFASDADDGSNGQIRFSI--SSGNTNSDFRIDSVTGVISVAKRLDRETRSAYSL 2206

Query: 125  TVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
             VQA D G         V++V    N  SP+F+ + Y +NV E
Sbjct: 2207 VVQAADRGSSPRVDHATVNIVLLDVNDCSPLFELSPYTINVQE 2249



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 11/156 (7%)

Query: 32  AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
           A S   SL + +NDIND+ P     +  + I     +   +K + ATD D G NA + YS
Sbjct: 432 ARSSFASLVIFVNDINDHPPIFQEELYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYS 491

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTG--GKSSQTIVEVSV 144
           +  VS   L  F I   SG++ T+  L+  E  S   + + A D G   K S T + VS+
Sbjct: 492 L--VSGNSLGWFSISDNSGLV-TSAALLDREVASEIVLNISAKDQGLQPKISYTKLIVSI 548

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               N + P F Q+TY V++ E A   + +  ++ S
Sbjct: 549 T-DVNDQVPTFTQSTYHVSLLEHAPAGTELLVLSAS 583



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 20/176 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG 64
            K  LDR+  +  ++   V+A+++     S  V++TV L+D+NDN P       +   +  
Sbjct: 1031 KAELDREVQD--RYNLVVVAKDRAVEPLSASVNVTVILDDVNDNRPLFNSTNYVFHFKEE 1088

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
            + R  +V ++ A D D G N+EI YS      T  H F ++  +G + +T KL       
Sbjct: 1089 QQRGSLVGQVFAEDKDFGPNSEIRYSF----ETPQHNFELNTITGELTSTLKLDRESLMR 1144

Query: 118  --AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                   S  V ++D G       Q  V+V  +   N   P F ++ Y  ++SE A
Sbjct: 1145 QRGTAVLSFVVVSSDQGLPRPLRDQAKVQV-YIQDINDNPPKFTKDIYQASISESA 1199



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIP 57
            +++ + LDR+     + ++ ++ R   G  +S  + L + + D+ND+ P+          
Sbjct: 1775 LIATKKLDRE----RRSKYSLLVRADDGKQSS-DMRLNITVKDVNDHTPKFSRPTYSFDI 1829

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  +  G     I+   A+D+D  +N E+ YS+      G   F ++P +GV   T  L 
Sbjct: 1830 PEDVTPGSIVEVIL---ASDSDSELNGEVNYSLEEDDEDG--TFLLNPVTGVFNVTRALD 1884

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q  Y +T +A D GG +S   V  +V+   N   PVF  + Y  +VSE     S++ 
Sbjct: 1885 YETQRYYILTAKAHDGGGLASTVRVYFNVL-DINDNPPVFSSSAYSTSVSESLPPGSSIV 1943

Query: 176  TITVS 180
            T+  S
Sbjct: 1944 TVEAS 1948



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 11/134 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTG 97
            +++ L D+ND  P         IQ       +V   +ATD D G N+ + YS+      G
Sbjct: 2016 VSIILLDVNDCPPIFTSQKTTYIQENTPVDTVVFTAQATDADSGPNSYVEYSL-----RG 2070

Query: 98   LH--KFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS-VVPGPNTRS 152
             H  KF I    G +   G+L   E   Y++TV ATD G     + ++V+ +V   N  +
Sbjct: 2071 QHQNKFIIGTVDGDVRLIGELDREELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNT 2130

Query: 153  PVFQQNTYDVNVSE 166
            P F QN YD+ V E
Sbjct: 2131 PSFSQNIYDIEVEE 2144



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
           I+ + QG    +  + L V++ D+ND  P           ++   A  +++ + A+D+DL
Sbjct: 528 ISAKDQGLQPKISYTKLIVSITDVNDQVPTFTQSTYHVSLLEHAPAGTELLVLSASDSDL 587

Query: 81  GVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           G N  I +S    +   L + FR+D  SG + T  +L   +Q  Y + ++A D G     
Sbjct: 588 GPNGTIRFSFDAETPASLRELFRLDAVSGRLSTAVELDREDQASYLLHIRAADAGSPPLH 647

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++  V++ +   N   PVF    Y  +V E     S V T+  S
Sbjct: 648 SVGRVNITLWDINDNRPVFYPVQYFASVKENEPPGSYVTTVLAS 691



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 9/163 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +  +V A ++     S  V + V + D+NDNAPR   I    + +       + ++  TD
Sbjct: 2716 YSLKVKATDRGSPPKSTSVKVLVRVLDVNDNAPRFSKIFSATVAENAPVGYTVTRVTTTD 2775

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS 135
             D G NA    S Y ++++GL  F I+P +G I     L   E   Y + V A D+G   
Sbjct: 2776 EDAGSNA---ISRYSLTDSGL-PFSINPNTGDITINRPLNREETDHYIVKVSAHDSGWTV 2831

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            S  +     +   N   P F + +Y +   E   I S V  ++
Sbjct: 2832 STDV--TIFITDVNDNVPRFTRPSYYLEYPELTEIGSLVTQVS 2872



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +SL +++ D+NDN+P    +    I +++     +  K+EATD D G+N EI Y I    
Sbjct: 956  LSLIISVYDVNDNSPMFDQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDIAG-G 1014

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTR 151
            NTG   F I P  G +    +L     ++Y++ V A D   +     V V+V+    N  
Sbjct: 1015 NTG-DMFGIFP-DGQLYIKAELDREVQDRYNLVVVAKDRAVEPLSASVNVTVILDDVNDN 1072

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P+F    Y  +  E     S V  +
Sbjct: 1073 RPLFNSTNYVFHFKEEQQRGSLVGQV 1098



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 19/168 (11%)

Query: 34  SVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNA--EITY 88
           + P  + + + D+NDN+P  P   ++   +  A   R Q++   ATD D+G N     TY
Sbjct: 101 TYPTEVRIVVLDMNDNSPVFPDASIVVSFKEDASRGR-QVILDTATDADIGSNGVDHTTY 159

Query: 89  SIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            I  V      KFR+D     SG      + +TG L       Y + ++  D G      
Sbjct: 160 RI--VEGNEQRKFRLDITVNPSGEGAFLHLVSTGGLDRELTPFYQLLIEVEDKGVPKKFG 217

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            ++V+V +   N   PVF+Q+ Y  +V E A++ S++  IT S    G
Sbjct: 218 YLQVNVTIQDINDNPPVFEQDQYHSSVFEDAAVGSSILQITASDQDEG 265



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 7/147 (4%)

Query: 40   TVN--LNDINDNAPRLPMIPP---IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            TVN  L D+ND +P   + P    +Q       + I+++ A D+D G N++++Y +    
Sbjct: 2223 TVNIVLLDVNDCSPLFELSPYTINVQENLENLPKDILQVVARDDDQGANSQLSYMLSGGD 2282

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              G        +  V +T  +   G +Y++ + ATD+G  +      V+V V   N   P
Sbjct: 2283 EEGAFTLSSAGQLSVTKTLDREF-GAEYTLLITATDSGSPALSGTGTVTVLVDDVNDNVP 2341

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF  +T+   ++E A   + V  +  S
Sbjct: 2342 VFSSSTFHTTIAEDAPTGTDVLLVNSS 2368



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 11/119 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKI 73
            ++  + A++    A S  + + V + D NDN P   +  P  I     +       ++ I
Sbjct: 1362 YKLNITAKDNGRPARSSSIPVVVYVRDFNDNPP---VFAPGDIFKSIPENLPVSASVLTI 1418

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A D D  +N ++ YSI      G + F IDP SG+I T+ ++       + +TV+ATD
Sbjct: 1419 TAHDTDADINGQLEYSIVQQVPRG-NYFGIDPSSGLIYTSKEIDREFSNLFELTVKATD 1476



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 72   KIEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            ++ A+D D G +  + Y I+  S N G   F I+ ++G I  TG L     E+ S+ V A
Sbjct: 3296 EVFASDRDQGEDGVVYYLIFGKSRNKG---FSINKKTGQIYVTGMLDREKEEKISLKVLA 3352

Query: 129  TDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGAS 169
             + G      I EV V   +   N   PVF Q+ YDV VSEG S
Sbjct: 3353 KNAGSIRGADIDEVFVNITILDAND-PPVFTQDLYDVQVSEGLS 3395



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 13/175 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKI 73
            F   V A++K     S   ++ + + + N + P     ++    P  +  G A R    +
Sbjct: 3032 FLMNVTAKDKGNPPLSANTAVRIAVTEENHHTPEFSQSQISATVPESLAVGTAIR---TV 3088

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             A D D  +N  ITY+I   ++ G+  F ++ ++GV+     L   E  Q+ + V A D 
Sbjct: 3089 SAKDKDKEMNGLITYNITSGNDNGV--FMLNSKTGVLSLANPLDFEEKQQHELRVSAIDG 3146

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  +  + V V++ V   N   P+F  + Y   V E     +TV  +  +   SG
Sbjct: 3147 GWIAKTSYVSVTIQVTDVNDNPPIFDPDEYFPTVQENVPSGTTVVRMNATDRDSG 3201



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 27/179 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSL--------TVNLNDINDNAPRL 53
            L+ + + +DR+  N   F   V A ++     +VPV          T+ + D+NDN P  
Sbjct: 1453 LIYTSKEIDREFSN--LFELTVKATDQ-----AVPVEFRRFALKNVTIWVTDLNDNFPTF 1505

Query: 54   ----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV 109
                 ++    I  G     +V   A D D   N E+ Y +    +     F +D  SG 
Sbjct: 1506 VSQNALVAEPNIVIGSILTTLV---AFDPDDEANGEVEYELVEGDS---DTFIMDRYSGD 1559

Query: 110  IETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            I    +L+     Y++TV ATD G     +  E++++       P+F Q  Y   + EG
Sbjct: 1560 IRLASQLVPSRLMYTLTVSATDHGIDRKTSKTELTIIL-EGADGPIFSQPKYITVLKEG 1617


>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
            africana]
          Length = 4345

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 23/186 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+     K+   V A + +   ASVPV + V   DINDN+P+   +    
Sbjct: 2958 WRIFSRKTLDRE--LTAKYLLSVTASDGK-FQASVPVEIFVL--DINDNSPQCSQL---- 3008

Query: 61   IQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            + AG+    +      +K+ A D D   NA+ITYS++     G  +F++DP +G + TT 
Sbjct: 3009 LYAGKVSEAVAPGHFVLKVSAIDLDTDTNAQITYSLH---GPGSEEFKLDPYTGEL-TTF 3064

Query: 115  KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            + +  E+   Y++  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ 
Sbjct: 3065 RALDREKKDVYNLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCSVAVFDNTTVK 3123

Query: 172  STVATI 177
            + VA +
Sbjct: 3124 TPVAVV 3129



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P   I Q G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2050 VSVEDVNDNPPEFQHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGVVTYAF----AEDY 2105

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S Q   EV V    N  +P+FQ
Sbjct: 2106 TYFRIDPYLGDISLKKPFDYKALNKYCLKVIARDRGNPSLQAEEEVHVTVR-NKSNPLFQ 2164

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2165 SPYYKVRVPENITLYTPI 2182



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            + ++ A+D D G+N  +TY I      G   F IDP +GV+ ++    AGE   +T++AT
Sbjct: 1255 VYRLVASDLDEGLNGRVTYIIEESDEEG---FSIDPVTGVVSSSNIFAAGEYNILTIKAT 1311

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            D+G    S+   + +  +P P   S P+ F++  Y   V E   +N  V  I+V
Sbjct: 1312 DSGQPPLSASVRLHIEWIPRPRPSSIPLAFEETHYSFTVMETDPVNHMVGVISV 1365



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 11/170 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIV-KIEA 75
            K+   +    K  ++ S   ++ VN+ D+N++ PR L  +  +++        I+  + A
Sbjct: 3280 KYFLSIECSRKGSSSLSDMTTIVVNITDVNEHQPRFLQDLYSVKVLENAIVGDIILTVSA 3339

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N  ITYS+  V    L  F I P++G ++   K +  EQ   Y + ++ATD+G
Sbjct: 3340 TDEDGPLNNAITYSL--VGGNQLGHFTIHPKTGELQ-VAKALDWEQTSSYLLRLRATDSG 3396

Query: 133  GK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                   T +++ VV   N   P F Q  Y   V E + I S V  + +S
Sbjct: 3397 QPPLHEDTDIDIQVV-DVNDNPPRFFQLNYSTTVQENSPIGSKVLQLILS 3445



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 3067 LDRE----KKDVYNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCSVAVFDNTTV 3122

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            +  +  + A D D G NA++ YS+   + +    F I+  +GVI     L    Q    +
Sbjct: 3123 KTPVAVVFARDPDQGTNAQVVYSL---TGSDEGHFSIEATTGVIRLEKPLRDRPQAVLEL 3179

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            TV+A+D G     S+   V VSVV G +   PVF    Y+V V E
Sbjct: 3180 TVRASDLGTPTPLSTLGTVTVSVV-GLDDYLPVFLSTEYNVQVRE 3223



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 9/171 (5%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVK 72
            P +    V+ R+++       V +T+++ D N + PR   +   + Q  +       +++
Sbjct: 1510 PSQHTLTVMVRDQEMPIKRNFVWVTIHVEDKNLHPPRFTQLH-YEAQVPDTTAPGTDLLQ 1568

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATD 130
            + A D+D G NAE+ YS    ++ G   F I    G+I    KL      Q+++TV+A D
Sbjct: 1569 VRAIDDDRGANAEVHYSFQKGNSEGF--FSISVLLGIITVARKLDQAYHAQHTLTVRAED 1626

Query: 131  TGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
             G      +  V +   P+  S P+F +  Y V + E   I S +  ++ +
Sbjct: 1627 QGSPQRYDLATVVIHISPSESSTPIFSKAEYFVEIPELIPIGSPILLVSAT 1677



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 12/163 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2529 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2586

Query: 62   QAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V N       ++P +GV++    L+  E
Sbjct: 2587 QSNVSKDFPVIQVLAYDADEGQNADVTYSVDSVENLAEEVIEVNPTTGVVKVKESLVGLE 2646

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVF 155
               +   ++A D G     ++V V +       P P    P++
Sbjct: 2647 NRAFDFKIKAQDGGPPHWDSMVPVQLQVVSNEAPLPKFSEPLY 2689



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G +  ++Y +    
Sbjct: 2775 VSINIQVKDVNDNRPIFEADPYKAFLTENMPVGTTVIQVTANDQDTGSDGRVSYRLAVDP 2834

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  SG I T  +L +   + YS  V A D G     SS+ ++EVS+    
Sbjct: 2835 GSNVHELFAIDSESGWITTLQELDSETRQSYSFYVVAYDHGQTLQLSSEALIEVSIT-DE 2893

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y   V E +     VAT+
Sbjct: 2894 NDNAPRFASEDYRGFVVENSEPGELVATL 2922



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 13/156 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A +K     S    + + + D+NDN PR+  P+  P   +       +++++A 
Sbjct: 1095 YWLTVLAVDKGSVPLSSVTEVYIEVTDVNDNPPRISRPVFYPSVREDAPLNTSVLQLDAW 1154

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-- 132
            D D   N ++T++I   ++ G   F I P +G++ T  KL     +++ + V   D G  
Sbjct: 1155 DPDSSSNGKLTFNITSGNHMGF--FVIHPLTGLLSTARKLDRENKDEHILEVTVLDNGEP 1212

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                +S+ +V V  V   N   PVF    ++V + E
Sbjct: 1213 PLKSTSRVVVRVLDV---NDNPPVFSHKLFNVRLPE 1245



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2249 TVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGS 2308

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2309 DISKFFQINGSTGEMSTAQELDYEAQQHFHMKVRAMDRGDPPLTGETLVVVN-VSDINDN 2367

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2368 PPEFRQPQYEANVSELATCGHLVLKV 2393



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  YS     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYKVTISEDMPLKSPICKVTATDADLGQNAEFYYSF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
           T    F I P SGV+   GKL      +Y + V A D   K S+
Sbjct: 189 TKSEMFAIHPTSGVVTVAGKLNVTWRGRYELQVLAVDRMRKISE 232



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I +++A D D   N  + Y++  +
Sbjct: 798 LTVNVIDWNDNAPRF---PPGGYQVTISEDAEVGSTIAELKAKDADSEDNGRVRYTL--L 852

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 853 SPT--EKFSLHPLTGELVVTGHLDRESESQYILKVEARDQPRKGHQ 896



 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1458 ELLQVQATDQDNGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1515

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            TV   D      +  V V++ V   N   P F Q  Y+  V
Sbjct: 1516 TVMVRDQEMPIKRNFVWVTIHVEDKNLHPPRFTQLHYEAQV 1556



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +  + ATD D G N ++ Y I   +  G   F I+  +G++  +  L   A   Y + + 
Sbjct: 726 LAHLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLSVSAPLDYEATSFYILNIT 783

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V+   N  +P F    Y V +SE A + ST+A +
Sbjct: 784 VYDLGTPPKSSWKLLTVNVIDW-NDNAPRFPPGGYQVTISEDAEVGSTIAEL 834



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2205 LMLFNTDFKTGVLTVTGPLDYESKTKHIFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2263

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2264 FSQLVYTTSVSEGLPAQTPVIQLLASDRDSG 2294



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 33/197 (16%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP---------RLPM- 55
            +LDR+  +  ++  +V AR+  ++G        L V L D NDN+P         ++P  
Sbjct: 872  HLDRE--SESQYILKVEARDQPRKGHQLFSVTDLIVTLEDANDNSPQCFTELSSLKVPED 929

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG 114
            +PP  I        +  ++A+D DLG   E+ Y +   V  T    F++D  +G +    
Sbjct: 930  LPPGTI--------LTFLDASDPDLGPAGEVQYILLDDVHGT----FQVDLTTGALSLEK 977

Query: 115  KLIAGEQ--YSITVQATDTGGK-SSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGA 168
            +L    Q  Y++++ A+D+G   + +T+  V V+      N   P F    +   V E +
Sbjct: 978  ELDFETQTGYNLSLWASDSGKPLARRTLCHVEVIVLDVNENLHPPHFTSFVHQGQVQEDS 1037

Query: 169  SINSTVATITVSRLASG 185
             + + V  +      SG
Sbjct: 1038 PLGTQVMVVAAHDDDSG 1054


>gi|149640360|ref|XP_001507355.1| PREDICTED: protocadherin beta-3-like [Ornithorhynchus anatinus]
          Length = 796

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDNAP     P  + Q  E  R    +  + A D D G+N EI+Y  +HVS+     F
Sbjct: 234 DINDNAPVFTQ-PRYEAQILENSRAGSLVSTVTANDFDAGINGEISYKFFHVSDHIQKTF 292

Query: 102 RIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV 145
            I+P SG I   G+L     + Y I +QA+D GG S++  V V V+
Sbjct: 293 EINPISGEIRLIGELDFETRQSYMIDIQASDVGGLSAKCTVHVQVM 338


>gi|237681077|ref|NP_001120991.2| protocadherin-19 precursor [Danio rerio]
          Length = 1088

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 91/193 (47%), Gaps = 12/193 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           LVV K  LDR+     ++ F++ A +      S  V L + + D NDN P    P+    
Sbjct: 191 LVVEK-TLDRE--TQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVN 247

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            ++       ++ + ATD D G N E+ YS I  VSN     F+IDP++GVI   G L  
Sbjct: 248 VLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVITVNGVLDH 307

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP---VFQQNTYDVNVSEGASINS 172
            E   + I VQA D G  S     +V V V   N  +P   +  +N+  V VSE A +  
Sbjct: 308 EELHIHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVSENAPLGY 367

Query: 173 TVATITVSRLASG 185
            +A + VS   SG
Sbjct: 368 VIALVRVSDNDSG 380



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 15/183 (8%)

Query: 2   LVVSKENLDRDP---PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
           L+++K+ +DRD      P  F    I+ E    +  + V + + + D+NDNAPR P    
Sbjct: 81  LLITKQKIDRDAVCRQTPKCF----ISLEVMSNSMEICV-IKIEIIDVNDNAPRFPTNHI 135

Query: 58  PIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRS---GVIET 112
            I+I    A      +E A+D D G N   TY+I      GL  K R D       V+E 
Sbjct: 136 DIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIKTRGDGSKIAELVVEK 195

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
           T       +Y+  + A D G       V++++ V   N  +PVF +  Y VNV E + IN
Sbjct: 196 TLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVNVLENSPIN 255

Query: 172 STV 174
           + V
Sbjct: 256 TLV 258



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 17/186 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQI 70
           F F+V A++      +   ++ + + D+NDN P +   PP+     E            +
Sbjct: 529 FEFKVSAKDGGDPPLTSNATVRIVVLDVNDNTPVM-TTPPLVNGTAEVSIPKNAGVGYLV 587

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +I+A D D G N  +TYSI   S   +  F ID  +G + TT      A   Y ITV A
Sbjct: 588 TQIKADDYDEGENGRLTYSI---SEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVA 644

Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            D G    S+   + + + P  N +  +   N   + +    SI + +  +T+  +A  C
Sbjct: 645 HDHGQTSLSASAYIVIYLSPDLNAQEQIGPVNLSLIFIIALGSI-AVILFVTMIFVAVKC 703

Query: 187 AIMNKE 192
              NKE
Sbjct: 704 KRDNKE 709


>gi|229472136|gb|ACQ72596.1| protocadherin-19 isoform 1 [Danio rerio]
          Length = 1083

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 91/193 (47%), Gaps = 12/193 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           LVV K  LDR+     ++ F++ A +      S  V L + + D NDN P    P+    
Sbjct: 186 LVVEK-TLDRE--TQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVN 242

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            ++       ++ + ATD D G N E+ YS I  VSN     F+IDP++GVI   G L  
Sbjct: 243 VLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVITVNGVLDH 302

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP---VFQQNTYDVNVSEGASINS 172
            E   + I VQA D G  S     +V V V   N  +P   +  +N+  V VSE A +  
Sbjct: 303 EELHIHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVSENAPLGY 362

Query: 173 TVATITVSRLASG 185
            +A + VS   SG
Sbjct: 363 VIALVRVSDNDSG 375



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 15/183 (8%)

Query: 2   LVVSKENLDRDP---PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP- 57
           L+++K+ +DRD      P  F    I+ E    +  + V + + + D+NDNAPR P    
Sbjct: 76  LLITKQKIDRDAVCRQTPKCF----ISLEVMSNSMEICV-IKIEIIDVNDNAPRFPTNHI 130

Query: 58  PIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRS---GVIET 112
            I+I    A      +E A+D D G N   TY+I      GL  K R D       V+E 
Sbjct: 131 DIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIKTRGDGSKIAELVVEK 190

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
           T       +Y+  + A D G       V++++ V   N  +PVF +  Y VNV E + IN
Sbjct: 191 TLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFDEPVYTVNVLENSPIN 250

Query: 172 STV 174
           + V
Sbjct: 251 TLV 253



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 17/186 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQI 70
           F F+V A++      +   ++ + + D+NDN P +   PP+     E            +
Sbjct: 524 FEFKVSAKDGGDPPLTSNATVRIVVLDVNDNTPVM-TTPPLVNGTAEVSIPKNAGVGYLV 582

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +I+A D D G N  +TYSI   S   +  F ID  +G + TT      A   Y ITV A
Sbjct: 583 TQIKADDYDEGENGRLTYSI---SEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVA 639

Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            D G    S+   + + + P  N +  +   N   + +    SI + +  +T+  +A  C
Sbjct: 640 HDHGQTSLSASAYIVIYLSPDLNAQEQIGPVNLSLIFIIALGSI-AVILFVTMIFVAVKC 698

Query: 187 AIMNKE 192
              NKE
Sbjct: 699 KRDNKE 704


>gi|345493993|ref|XP_003427197.1| PREDICTED: LOW QUALITY PROTEIN: neural-cadherin-like [Nasonia
           vitripennis]
          Length = 3062

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  ++  V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 659 LAKELDFEDLRQPHIYQLIVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 716

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++ATD D G NAEI Y +          F +D   GVI    +L A 
Sbjct: 717 VDEDIPLGTSIIKVKATDADSGANAEIEYLVSD------DHFSVDA-GGVIVNNKQLDAD 769

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y  TV A D G  S      V +     N   P F Q  Y  NV E A  N+ V 
Sbjct: 770 NNNSYYEFTVTAKDKGEPSKSGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 829

Query: 176 TITVS 180
           T+  S
Sbjct: 830 TVVAS 834



 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 30/196 (15%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVP----------VSLTVNLNDINDNAPRLP 54
            SK  LDRD     K+   V A++     A  P            + V + D+NDN P   
Sbjct: 869  SKITLDRD-----KYELNVTAKDD---GACCPNGENNIHTSTAVVVVFITDVNDNKPVFK 920

Query: 55   ----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                  P ++  A      ++K++ATD D GVN ++ YSI    N    KF +D  +G +
Sbjct: 921  DCGTYYPKVEEGATNGS-PVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGQV 979

Query: 111  ETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
             +T K+       G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV
Sbjct: 980  -STNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENV 1038

Query: 165  SEGASINSTVATITVS 180
             + ASI + +  ++ S
Sbjct: 1039 KQDASIGTNILRVSAS 1054



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1543 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPLFPQGVYFGNVTENGT 1602

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA++ YSI        TG   F I+  +GVI+T    +  
Sbjct: 1603 AGMVVMTMTAVDYDDPHEGTNAKLVYSIEKNVIEEETGSPIFEIESETGVIKTAVCCLDR 1662

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1663 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWMTEVDE 1711



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 8/152 (5%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 992  GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1051

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQAT 129
             A+D D   N  I YS+   ++  GL  F I P SG I     L      ++Y + V A+
Sbjct: 1052 SASDEDADNNGAIVYSLSAPNDEKGLEYFEIQPESGWIVLKKPLDGCFPRDKYRLKVSAS 1111

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            D G   S   V+V + V   N + PV+ +N Y
Sbjct: 1112 DRGSPPSCAEVDVELDVVDRNNKPPVWDKNVY 1143


>gi|338725210|ref|XP_001494282.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Equus caballus]
          Length = 3016

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 335 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 387

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T G
Sbjct: 388 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 447

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 448 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 507

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 508 PGAPVLRVTAS 518



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
            +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 875  YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYEDVPPFT-------- 926

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
             +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 927  SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRA 985

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 986  YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 1040



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S+TV + D+NDN P     P   ++  E       +V + A
Sbjct: 670 YSFGVEARDHGTPALTASASVTVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 728

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 729 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 779

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 780 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 836



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 792 VVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 846

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 847 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 905

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  ++ E     ++V  I+ +   SG
Sbjct: 906 APQFLRDSYQGSIYEDVPPFTSVLQISATDRDSG 939



 Score = 38.5 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLG 81
            R+    +A+  V L+V   D NDNAP+      + +Q  E       ++++ A+D D G
Sbjct: 467 GRDPGPRSATAAVFLSVE--DDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKG 523

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSS 136
            NA + YSI  +S     +F +D ++G ++    L     ++Y++ ++A D G     + 
Sbjct: 524 SNALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNV 581

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +V V V+   N  +P+F    +   V E   +   V
Sbjct: 582 SGLVTVQVL-DINDNAPIFVSTPFQATVLESVPLGYLV 618



 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 966  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 1023

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 1024 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 1081

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 1082 DRPEYILVIQATSAPLVSRATV 1103


>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
          Length = 4590

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYH 92
            SL V++ DINDN P   +    +  A  +       ++++I A   D+  NAEITYSI  
Sbjct: 3216 SLIVSVLDINDNPP---VFEHREYSASVSEDVLVGTEVLQIYAASRDIEANAEITYSI-- 3270

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            VS     KF ID  +G I     L   +  +Y +TV+ATD G  S   +V V++ V   N
Sbjct: 3271 VSGNEHGKFSIDSTTGAIFIIESLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDIN 3330

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3331 DNTPVFSQDTYTAVISEDAILEQSVITV 3358



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 15/166 (9%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G       ++ + L D+NDNAP     P      +  E +  + +++ATD 
Sbjct: 3094 YYLLVKATDGGGRFCQANIILTLEDVNDNAPEFTADPYSITVFENTEPKTLLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---- 132
            D G+N +I YS+    N+   +F ID  SG+I     L    Q  Y++T++ATD G    
Sbjct: 3154 DAGMNRKIHYSLV---NSAEGQFSIDEFSGIIRLEKPLDRELQAVYTLTLKATDEGLPRR 3210

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +S  IV V  +   N   PVF+   Y  +VSE   + + V  I
Sbjct: 3211 LSSTSSLIVSVLDI---NDNPPVFEHREYSASVSEDVLVGTEVLQI 3253



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+          ++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2549 IFTSEKLDRETQAEKVIAISLMAKDSGGKVAFC--TINVILTDDNDNAPQFRATEYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +   R   ++K+ A+D D G NA+ITY+I   S        ID  SG+I T   LI  E
Sbjct: 2607 GSDVPRGTSVIKVWASDADEGTNADITYAIEAESENVKENLEIDSLSGIITTKESLIGLE 2666

Query: 121  QYSIT--VQATDTGGKSSQTIVEV--SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               +T  V+A D G    +++V V   ++P P    P F +  Y   VSE   + + +  
Sbjct: 2667 NEFLTFFVRAVDGGSPQKESVVPVYARILP-PEVPLPKFSEPFYSYTVSEDIPVGTVIDI 2725

Query: 177  I 177
            I
Sbjct: 2726 I 2726



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + + E LD +  N  +    V+ R++          + ++++D ND+AP           
Sbjct: 1515 LYTSEKLDHETMN--QHILTVMVRDQDVPVKRNYARIIISVSDTNDHAPWFTSSSYEGRV 1572

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
             ++      ++++ A D D G NAEI YSI    N G + F IDP  G+I+   +L    
Sbjct: 1573 YESAAVGSAVLQVTALDKDKGKNAEIVYSI-ESGNIG-NSFFIDPVLGMIKIAKELDRSK 1630

Query: 120  -EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E+YS+ V+ATD G      +  V + V   +  SP F    Y   +SE ASI S V  +
Sbjct: 1631 QEEYSLMVKATDKGDPPMSEVTSVHIFVTVSDNASPKFTAKEYSTEISESASIGSFVGMV 1690

Query: 178  T 178
            T
Sbjct: 1691 T 1691



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K+ LDR+  +   +   + A +  GT A+  V + V + D NDN+P         
Sbjct: 2977 WKVYVKKPLDREEKD--NYLLNITATD--GTFATRAV-VEVKVLDANDNSPVCEKALYTD 3031

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A   + I+++ ATD D+  NAEITY+++    TG  KFR+ P +G ++T+  L  
Sbjct: 3032 SVPEDALPGKLIMQVSATDADIRSNAEITYTLH---GTGAEKFRLTPDTGELKTSMPLDR 3088

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +Q  Y + V+ATD GG+  Q  + +  +   N  +P F  + Y + V E
Sbjct: 3089 EQQAVYYLLVKATDGGGRFCQANI-ILTLEDVNDNAPEFTADPYSITVFE 3137



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 19/197 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
            +  +   LDR+    G+   +V+  +      S    + V + D NDN P+ L     IQ
Sbjct: 1197 ITTTSRKLDRE--QQGEHILEVMVTDNGIPPKSTIARVIVKVLDENDNKPQFLQKFYKIQ 1254

Query: 61   I-QAGE------ARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            + + G+      ARR+ I ++ A D D G NAEI+YSI      G  KF I+P++GV+ +
Sbjct: 1255 LPERGKPERERTARREPIYRVIAADKDEGPNAEISYSIEDGDEHG--KFFIEPKTGVV-S 1311

Query: 113  TGKLIAGEQYSI-TVQATDTG--GKSSQTIVEVSVVPG--PNTRSPVFQQNTYDVNVSEG 167
            + K  A + Y I +++A D G   KSS T + +  +P   P T    F++  +   V E 
Sbjct: 1312 SKKFSAAKDYDILSIKAVDNGRPQKSSTTRLHIEWIPKPVPPTEPIYFEEAFFSFTVMES 1371

Query: 168  ASINSTVATITVSRLAS 184
              +   +  I V  L +
Sbjct: 1372 DPVAHMIGVIAVEPLGT 1388



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+      +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 IIETADRLDRE--TTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++IEA D D   + ++TY I   +  G   F I+P++G+I TT + +  
Sbjct: 1149 VMENSPKDVSVIQIEAFDPDSSSSEKLTYKITSGNPQGF--FSINPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V V   N   P F Q  Y + + E
Sbjct: 1207 EQQGEHILEVMVTDNGIPPKSTIARVIVKVLDENDNKPQFLQKFYKIQLPE 1257



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 12/170 (7%)

Query: 6    KENLDRDPPNPGKFRFQV-IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQ 62
            ++NLD +     +F  Q   A E     +SV VS+ V   D+NDN P L   P     ++
Sbjct: 2764 EKNLDHETTKWYQFSVQAQYASEDYNVVSSVEVSIQVK--DVNDNQPVLESNPYEAFIVE 2821

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI--AG 119
               A  ++++++ TD D G+N ++TYS+        +  F I+  +G I T  +L     
Sbjct: 2822 NMPAGTRVIQVKGTDLDSGLNGQVTYSLDPSQELDTIESFTINMETGWITTLKELDHEKR 2881

Query: 120  EQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++Y ITV A+D G K   SS  +VEV+V    N   P F    Y   VSE
Sbjct: 2882 DKYRITVIASDRGEKIQLSSLAVVEVTVT-DVNDNPPRFTAEIYKGTVSE 2930



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ +N+ DINDN P         + + +A   + ++ + A D D   N  I Y+I    
Sbjct: 3320 VTVNINVTDINDNTPVFSQDTYTAVISEDAILEQSVITVMADDADGPSNNCIHYTIID-G 3378

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            N G + F IDP  G I+ T KL+  E+   Y++TVQA+D G         V++ V   N 
Sbjct: 3379 NQG-NPFTIDPTRGEIKVT-KLLDREKISGYTLTVQASDNGNPPRLNTTTVNIDVSDVND 3436

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PVF +  Y V + E   I  +V  + V+
Sbjct: 3437 NPPVFSKGNYSVIIQENKPIGFSVLQLVVT 3466



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 19/177 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGE 65
             DR+         +V    K    A + V +TV   D+NDNAP    LP    +++ + E
Sbjct: 2040 FDREQQESFDVVIEVTEEYKPSVVAHIVVKVTVE--DVNDNAPFFVNLPYYAVVKVDS-E 2096

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
                I ++ A D D G N E+ Y +          F+IDP +G I    K       ++Y
Sbjct: 2097 VGHVIRRVTAVDKDTGRNGEVHYYL----KEHQEHFQIDP-TGEISLKKKFEPDTVNKEY 2151

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +TV A D G    S++ +V ++V+   +   PVF++  Y   + E   ++S V  +
Sbjct: 2152 LVTVVAKDGGDPAFSAEVVVPITVM---SKAMPVFEKPFYSAEIPENIQLHSPVVHV 2205



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNA--PRLPMIPPIQIQAGEA--RRQIVKI 73
            +   V A++K +  + S    + V + D+N+N   PR  +         +A     ++ +
Sbjct: 998  YNLTVRAKDKGKPISLSATCYIEVEIVDVNENLHPPRFSIFADKGFIKEDAPVGSSVMTV 1057

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A D D G + EI YSI   S  G+  FRID   G+IET  +L       Y +TV ATD 
Sbjct: 1058 SAYDEDEGRDGEIRYSIRDGSGIGV--FRIDEEKGIIETADRLDRETTSHYWLTVYATDQ 1115

Query: 132  GGKSSQTIVEVSVVPG------PNTRSPVF 155
            G     + +E+ +  G      P T  PV+
Sbjct: 1116 GVVPLSSFIEIYIEVGDVNDNAPQTTEPVY 1145



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 37   VSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
            V L V++ D+NDN P+ +P    ++I+       I+  +EA D DLG ++++ YS+    
Sbjct: 912  VILKVSVEDVNDNPPKFIPSNYHVKIREDLPEGTIIMWLEAYDPDLGQSSQVRYSLL--- 968

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GP 148
            ++G   F +D  SG I    +L   ++  Y++TV+A D G     S+   +EV +V    
Sbjct: 969  DSGDSTFDVDKLSGAIRIVQRLDYEKKQFYNLTVRAKDKGKPISLSATCYIEVEIVDVNE 1028

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            N   P F        + E A + S+V T++
Sbjct: 1029 NLHPPRFSIFADKGFIKEDAPVGSSVMTVS 1058



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 22/181 (12%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  N  +F  QV         A    ++T+ + DIND  P           ++P  
Sbjct: 1835 SLDYEETNIFRFSVQVHDMGIPRLYAEYAANVTIYVIDINDCPPVFSRELYETSILVPTY 1894

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLI 117
            +        +++ + ATD D G+ +++ YSI    N G  KF I+P++G  +++ T +L 
Sbjct: 1895 K------GVKVISVNATDADSGIFSQLIYSIIE-GNIG-EKFSINPKTGDIIVQNTTQLR 1946

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +  +Y +TV+A+D G  +S   V+++V     ++   F Q++Y   V E ++   T+A +
Sbjct: 1947 S--RYELTVRASD-GRFASTASVKINVKESKASQLK-FTQSSYSATVQENSTEAKTIAVV 2002

Query: 178  T 178
            T
Sbjct: 2003 T 2003



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI  + K++  E    Y++TVQ T+  G S+   V V +    N  +P+F Q
Sbjct: 1711 FAINPNSGVI-VSQKILDFETLPVYTLTVQGTNMAGLSTNATVVVHL-RDENDNTPIFMQ 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1769 AEYTGLISESASINSVVLT 1787



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDNAP   +     ++  E +    +I++IEATD DLG N E+ YS+     
Sbjct: 809 LDIKILDANDNAPEF-LQDSYFVELNENKEPNSEIIQIEATDKDLGANGEVKYSLL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF I+  +GV++  G L   EQ  + + ++A D   +  Q     I++VS V   N
Sbjct: 864 TDTDKFTINAVTGVVKVVGVLDREEQHVHFLKIEARDQPTEEPQLFSTVILKVS-VEDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F  + Y V + E
Sbjct: 923 DNPPKFIPSNYHVKIRE 939



 Score = 42.7 bits (99), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----Y 122
            R  + +++ATD D G    ITY I  V++    +F  + R G I T+ KL    Q     
Sbjct: 2509 RTLVTQVKATDEDSGTYGHITYHI--VNDFAKDRFYTNER-GQIFTSEKLDRETQAEKVI 2565

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            +I++ A D+GGK +   + V ++   N  +P F+   Y+VN+       ++V  +  S  
Sbjct: 2566 AISLMAKDSGGKVAFCTINV-ILTDDNDNAPQFRATEYEVNIGSDVPRGTSVIKVWASDA 2624

Query: 183  ASG 185
              G
Sbjct: 2625 DEG 2627



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGV+  TG+L   +   Y +
Sbjct: 166 RTSIARVSATDADIGTNGEFYYSFKERTDV----FAIHPTSGVVVLTGRLDYSDTKHYEM 221

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 222 EILAVDRGLK 231



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDN P            +A      +V++ ATD D G N  I+Y
Sbjct: 2262 TGAHADVFVDIIVEDINDNPPVFTEQSYTATLSEASVIGTSVVQVSATDADSGTNRGISY 2321

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVV 145
             +   ++     F ID  +G+I T   L   +  Q+ + V+A D G    S   V    V
Sbjct: 2322 HLVEDNSESHDYFHIDSSTGLILTARTLDYEQIKQHKLLVRAIDGGMLPLSSDTVVTVDV 2381

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               N   P+F Q  Y+  +SE A     V  +  S
Sbjct: 2382 TDLNDNPPLFNQLLYEAKISELAPRGHFVTCVQAS 2416



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 8/144 (5%)

Query: 46   INDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            +NDN P    ++   +I     R   V  ++A+D D     ++ YSI  ++      F I
Sbjct: 2384 LNDNPPLFNQLLYEAKISELAPRGHFVTCVQASDADSSDVDKLEYSI--LTGNDQKNFVI 2441

Query: 104  DPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            + ++G+I  +   +      Y++ V  +D   +SS   V ++V    N  SPVF QN Y+
Sbjct: 2442 NSKTGIITVSNLRRQALKSHYNLNVSVSDGVFRSSAQ-VHITVTSA-NMHSPVFSQNEYE 2499

Query: 162  VNVSEGASINSTVATITVSRLASG 185
            V ++E A + + V  +  +   SG
Sbjct: 2500 VELAENAPMRTLVTQVKATDEDSG 2523



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I+++ ATD D     ++ Y++   ++   L KFR+DP +G + T+ KL      Q+ +T
Sbjct: 1475 EILQVSATDRD--EKNKLIYTMQGSTDPISLKKFRLDPGTGSLYTSEKLDHETMNQHILT 1532

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      +    + + V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1533 VMVRDQDVPVKRNYARIIISVSDTNDHAPWFTSSSYEGRVYESAAVGSAVLQVT 1586



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
           LTV++   N++AP   +I  + +   E+ +     IV +E  DND G N EI  S+  V+
Sbjct: 244 LTVHVEQANEHAP---VITAVTLTPSESDKDPTYAIVTVE--DNDQGSNGEIA-SLNIVA 297

Query: 95  NTGLHKFRI-----DPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVP 146
              L +FR        +   I+  G +        Y++T+QA D G     + V+V  V 
Sbjct: 298 GDPLQQFRTVRSVPGGKEYRIKAMGHIDWESHPFGYNLTLQAKDKGNPPQFSSVKVVHVT 357

Query: 147 GPNTRS-PV-FQQNTYDVNVSEGASINSTVATI 177
            P  +S PV F++  Y   +SE A  N+ V  +
Sbjct: 358 SPQFKSGPVRFEKEIYRAEISEFAPPNTPVIMV 390


>gi|47551325|ref|NP_999974.1| cadherin-23 precursor [Danio rerio]
 gi|46452161|gb|AAS98176.1| cadherin 23 [Danio rerio]
          Length = 3366

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 15/186 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            ++VS   LDR+    G++  ++IA +      +   +LT+ + D+ND  P   P +  + 
Sbjct: 950  ILVSTVVLDRE--QIGQYYLRIIAYDAGQFPRTSTSTLTITVLDVNDETPTFFPSVYNVS 1007

Query: 61   IQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++    R   +V++  TDND G+NAE++Y I   +  G  KF +  R+GV+ T   L   
Sbjct: 1008 LEESVPRDYLVVRLNCTDNDAGLNAELSYFITAGNQDG--KFSVGFRTGVVRTVVGLDRE 1065

Query: 120  EQ--YSITVQATD---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASI 170
             Q  Y + ++A D    GG+ + T      V   N   P+F QN+Y+ +V E    G SI
Sbjct: 1066 TQASYRLVIEAIDNGPAGGRRTGTATVYVEVLDVNDNRPIFLQNSYETSVLENIPRGTSI 1125

Query: 171  NSTVAT 176
                AT
Sbjct: 1126 LQVQAT 1131



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+  +  ++  +V A +         VSLTVN+ D+NDN P L       +   E   
Sbjct: 1488 LDRESVD--RYLLKVRAMDNGSPPRYTDVSLTVNIVDVNDNPPVLQSPRGYNVSVSENVG 1545

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QY 122
                ++++ ATD D+G NA ++Y I    N  L  FR+D  +G I T       E   QY
Sbjct: 1546 GGTSVLRVVATDRDIGANAMLSYYI-TAGNQDL-TFRMDRMTGEIVTRPSPPDREKQQQY 1603

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA-SINSTVATIT 178
            ++TV   D G    S+ T V V ++   N  +P F +  Y   + EG  ++ + +AT+T
Sbjct: 1604 TLTVTVEDDGTPTLSTSTTVWVRII-DENDNAPEFPEEEYVTELREGPNTVGAIIATVT 1661



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 24/160 (15%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAA------SVPVSLTVNLNDINDNAPRLP--MIPPIQ 60
            LDR+  +  ++     AR+  G +       SV V LTV   D+ND  PR    +     
Sbjct: 2466 LDRETKD--RYTLTAYARDNPGGSPNNRRENSVQVQLTVL--DVNDFRPRFSERVFTTSV 2521

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       ++ ++ATD D G NA +TYS+      G   F +DP +G+I +   L + E
Sbjct: 2522 FENEPVGTSVITMKATDLDEGENALLTYSL---QGPGADAFSLDPDTGLIRSLRLLQSFE 2578

Query: 121  QYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVF 155
            ++++TV ATD G     G +S  I  + V    N   P+F
Sbjct: 2579 RFNLTVVATDQGRPPLWGTASLQITVIDV----NDNRPIF 2614



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 19/160 (11%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI----- 90
            ++ VN+ D+NDN P  P     P +I  G+   ++  ++ATD D G N ++ YSI     
Sbjct: 1732 TVLVNVIDVNDNPPIFPRPFEGPFEITEGQPGPRVWTVKATDADSGSNGKVEYSITAGDL 1791

Query: 91   ---YHVSNT-GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-V 145
               + +S+  G  + R D     IE   + IA   Y+IT+ A D G  S    V V + V
Sbjct: 1792 KNEFVISSVEGELRVRKD-----IELDRETIA--YYNITITAKDLGTPSLNATVVVGILV 1844

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               N   P+      + +VSEGA++ + +  +      SG
Sbjct: 1845 LDINDNDPILLNLPANTSVSEGAAVQTFIIQVRAQDSDSG 1884



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAG 64
            +++++ D      +   + A++    + +  V + + + DINDN P L  +P    +  G
Sbjct: 1807 RKDIELDRETIAYYNITITAKDLGTPSLNATVVVGILVLDINDNDPILLNLPANTSVSEG 1866

Query: 65   EARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--Q 121
             A +  I+++ A D+D G NA +TYSI   ++ G   F I+  SGV++    L      +
Sbjct: 1867 AAVQTFIIQVRAQDSDSGRNALLTYSITAGNSDG--AFYINETSGVVQVNRPLDRERVAE 1924

Query: 122  YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            YS+T+   D        +    ++ V+++   + R P+F Q++Y   +SE +   +TV  
Sbjct: 1925 YSLTITVKDNPDNPRIARRDSELLTVTLLDVNDNR-PIFSQSSYRGEISENSPTGTTVLI 1983

Query: 177  ITVSRLA 183
            +    LA
Sbjct: 1984 LNGPVLA 1990



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 12/165 (7%)

Query: 32   AASVP-VSLTVNLNDINDNAPRL-PM----IPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            + SVP   LT+N+ D+NDNAPR  P          ++       ++ + A D D G N +
Sbjct: 2274 SVSVPNAKLTINVLDVNDNAPRFRPFGVANFSESILEGAVPGTTLLSVTAVDPDKGPNGQ 2333

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEV 142
            I Y + ++      +   DP +G I    + +  EQ    + TV+A D G     T + V
Sbjct: 2334 IIYQLLNLPRGNYIRLE-DPSTGKI-VANRTVDFEQVQWLNFTVRAQDHGSPPRFTELPV 2391

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             + +   N  +PVFQQ  Y  ++ E  ++ + + ++  +   SG 
Sbjct: 2392 YLRIIDVNDNNPVFQQPLYQKSIFEDVALGTIIVSVRATDADSGL 2436



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 8/123 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE- 74
            +F   V+A ++         SL + + D+NDN P    P    I     E    +V  E 
Sbjct: 2579 RFNLTVVATDQGRPPLWGTASLQITVIDVNDNRPIFVRPANGTIMHILEEQPPGLVVYEV 2638

Query: 75   -ATDNDLGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             ATD D GVN E+ YS       N     F ID  +GVI T  KL   +Q  YS+ V A 
Sbjct: 2639 FATDEDEGVNGEVRYSFLQTGAGNRDWENFHIDAVTGVITTAVKLDREKQALYSLVVVAY 2698

Query: 130  DTG 132
            D G
Sbjct: 2699 DLG 2701



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 18/174 (10%)

Query: 16  PGKFRF-QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQ 69
           PG   F  ++A++    + +  V + + L D NDN P   +       P  I AG     
Sbjct: 637 PGGLIFLTLMAKDGGNPSLNSTVPVIIELIDQNDNPPEFSLPSYIVNIPENIVAGAT--- 693

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           ++ + ATD D       T  IY +   G  +FR++ RSG I TT  L      +Y + V+
Sbjct: 694 VLFVNATDLDASREFGQTSLIYSLQ--GSSQFRLNTRSGEITTTALLDREMKSEYILIVR 751

Query: 128 ATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           A D G     K+    V ++V+   N  +PV++   Y  NV E + I++ V T+
Sbjct: 752 AVDGGVGPQQKTGIATVNITVL-DINDNAPVWRDEPYQANVVEMSPIDTDVITV 804



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 10/173 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           +F   ++AR+  G   +    L +N+ D+NDNAP           ++  +A +Q+++  A
Sbjct: 532 RFTLTILARDGGGEETTG--RLRINVMDVNDNAPVFQKEAYTGSLMENEQAPQQVIRARA 589

Query: 76  TDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATD 130
           TD D   N  +TYSI + S         I     VI  T  L    + G    +T+ A D
Sbjct: 590 TDEDSPPNNILTYSIIYASQFRSFFSISIAEGYAVITVTRPLDYEQVPGGLIFLTLMAKD 649

Query: 131 TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            G  S  + V V + +   N   P F   +Y VN+ E     +TV  +  + L
Sbjct: 650 GGNPSLNSTVPVIIELIDQNDNPPEFSLPSYIVNIPENIVAGATVLFVNATDL 702



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 13/118 (11%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + L DIND +PR   +      A +A+    +++++A DND+G N+ + Y I  +    L
Sbjct: 2842 IFLEDINDQSPRFTKLEYTTGVAADAKVGSDLIRVQAIDNDIGNNSLVLYHILSIRYIKL 2901

Query: 99   HK---------FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVV 145
            H          F I    G+I T    +A     + + V A D  G S   +V + ++
Sbjct: 2902 HSNDSEEMGNVFIIGETDGIICTFDLFMAYAPGYFIVEVLARDLAGHSDVALVSIYIL 2959



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 25/182 (13%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPI 59
            LDR+  +  +    +++ +  G  +SVP  LT+ + D+NDN P         RLP   P 
Sbjct: 2030 LDREAFSVPRVELFLVSVDVGGLNSSVP--LTITILDVNDNPPVFNPSSFTVRLPENSPT 2087

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +        + ++ ATD D G N  +    Y + +    +F +D  SG +      +  
Sbjct: 2088 GV-------VVTQLSATDADAGSNGWLQ---YRLDSGAQDRFIVDALSGAVLVGNATLDR 2137

Query: 120  EQ---YSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            E+   Y + V ATD G  S S T     V+   N   P F Q    ++V+E       VA
Sbjct: 2138 EERSSYRLVVIATDRGTPSLSGTATLTVVLDDVNDSRPRFIQPVQTISVNESTPPGVVVA 2197

Query: 176  TI 177
            T+
Sbjct: 2198 TL 2199



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 15/127 (11%)

Query: 41  VNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++L + NDN P        +  P  I+ G +   +++I+ATDND+G    + Y      +
Sbjct: 452 IDLINENDNRPIFSQTLYNISLPESIEPGAS---LLQIKATDNDIGTFGVVRYYFSDEPD 508

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
               +F +D  +G +   G+L      ++++T+ A D GG+ +   + ++V+   N  +P
Sbjct: 509 ----QFSLDAETGWVTLRGRLDYELMRRFTLTILARDGGGEETTGRLRINVM-DVNDNAP 563

Query: 154 VFQQNTY 160
           VFQ+  Y
Sbjct: 564 VFQKEAY 570



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 30/167 (17%)

Query: 39   LTVNLNDINDNAPRL-------------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            LTV L D+NDN P               P    + I  G        + A D D+GVNA 
Sbjct: 1948 LTVTLLDVNDNRPIFSQSSYRGEISENSPTGTTVLILNG-------PVLAEDKDIGVNAV 2000

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQYSI-----TVQATDTGGKSSQTI 139
            ++Y +     T +  F ID R+GV+    G ++  E +S+      + + D GG +S   
Sbjct: 2001 VSYGLL---GTRVDIFSIDSRTGVVSVRGGAVLDREAFSVPRVELFLVSVDVGGLNSSVP 2057

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            + ++++   N   PVF  +++ V + E +     V  ++ +   +G 
Sbjct: 2058 LTITIL-DVNDNPPVFNPSSFTVRLPENSPTGVVVTQLSATDADAGS 2103



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 25/178 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V  ++ LDR+  +  +  F V   + QG    V  ++ + + D+NDNAP      P  I
Sbjct: 92  VVWLRQPLDREAKSEMQVEFTV--SDSQGV---VKDTVNIQIGDVNDNAPSF-YNQPYAI 145

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
           Q  E       +  + ATD D GV   + +S    S      F ID   G++  T  L  
Sbjct: 146 QIPENTPVGTSVFMVNATDPDQGVGGSVLFSFQPPS----QFFSIDGARGIVTVTRALDY 201

Query: 117 ---IAGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
              IA   Y +TV ATD   +   SS   + +++    +   P+F    Y  N+ E A
Sbjct: 202 ETTIA---YQLTVNATDQDKRRPLSSLANLAITITDIQDM-DPIFTNLPYSTNIMEDA 255



 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 22/162 (13%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
             R  +I+   +GT    +S   ++ VNL D+NDN P    +P     P  +  G +   +
Sbjct: 857  MRTIIISATDRGTPPLRSSASATVFVNLLDLNDNDPAFLNLPFVAEVPEGLPIGSS---V 913

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGE--QYSITV 126
             +++  D D   N  +T ++      G+ +  FR++  +G++ +T  L   +  QY + +
Sbjct: 914  FRVQVQDPDEAANGAVTMAL----QMGMPRLDFRLNITTGILVSTVVLDREQIGQYYLRI 969

Query: 127  QATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             A D G   ++S + + ++V+   N  +P F  + Y+V++ E
Sbjct: 970  IAYDAGQFPRTSTSTLTITVL-DVNDETPTFFPSVYNVSLEE 1010



 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            S   L  F+ID  +G I  TG L    G+ Y++TV A D G K   T+     +   N  
Sbjct: 1358 SPAALALFKIDSVTGRITVTGLLDRERGDSYTLTVVADDGGPKRGSTVKVSITILDENDN 1417

Query: 152  SPVFQ-QNTYDVNVSEGASINSTVATI 177
            SP F   +   VN+ E  +I   VA +
Sbjct: 1418 SPEFDITSDLSVNIPEDTAIGKRVAVV 1444


>gi|73959343|ref|XP_537042.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 isoform 1
           [Canis lupus familiaris]
          Length = 2926

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 244 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 296

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T G
Sbjct: 297 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPRSGVIRTRG 356

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 357 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 416

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 417 PGAPVLRVTAS 427



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 784 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 835

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 836 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRA 894

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 895 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 949



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 579 YSFGVEARDHGTPVLTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 637

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 638 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 688

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 689 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 745



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 701 VVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 755

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 756 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 814

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 815 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 848



 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLG 81
            R+    +A+  V L+V   D NDNAP+      + +Q  E       ++++ A+D D G
Sbjct: 376 GRDPGPRSATAAVFLSVE--DDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKG 432

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSS 136
            NA + YSI  +S     +F +D ++G ++    L     ++Y++ V+A D G     + 
Sbjct: 433 SNALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNV 490

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +V V V+   N  +P+F    +   V E   +   V
Sbjct: 491 SGLVTVQVL-DINDNAPIFVSTPFQATVLESVPLGYLV 527



 Score = 38.1 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 875  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 932

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 933  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 990

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 991  DRPEYILVIQATSAPLVSRATV 1012


>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
          Length = 4335

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +  A+   V + + + DINDN+P+   +    
Sbjct: 2965 WSIFSRKTLDRE--HIAKYLLRITASDGKFQAS---VIVEIFVLDINDNSPQCSQL---- 3015

Query: 61   IQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+    I      +++ ATD D   NA+ITY+++     G  +F++DP +GV+ T  
Sbjct: 3016 LYTGKVSEDISPGHFILQVSATDLDSDTNAQITYTLH---GPGADEFKLDPHTGVLTTLT 3072

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  +I +
Sbjct: 3073 ALDRERKDVYSLVAKATDGGGQSCQADVTLQ-VEDVNDNAPRFFPSHCAVAVFDNTTIKT 3131

Query: 173  TVATI 177
             VA +
Sbjct: 3132 PVAVV 3136



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 10/172 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVK 72
            NP K+   +    K  ++     ++ VN+ DIN++ PR P  +     ++       ++ 
Sbjct: 3285 NP-KYFLSIECSRKGSSSLGDMTTIVVNITDINEHRPRFPQDLYSTRVLENAIVGDTVLT 3343

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQAT 129
            + ATD D  +N+ ITYS+  V    L  F IDP+ G ++   K +  EQ   YS+ ++AT
Sbjct: 3344 VSATDEDGPLNSAITYSL--VGGNQLGHFAIDPKKGELQ-VAKALDWEQTSSYSLRLRAT 3400

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D+G        +V++ V   N   P F Q  Y  +V E   I S V  + +S
Sbjct: 3401 DSGRPPLHEDTDVAIQVVDVNDNPPRFFQLNYSTSVQENCPIGSKVLQLILS 3452



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P   I Q G E    I ++ A+D DLGVN  +TY+     +   
Sbjct: 2057 VSVEDVNDNHPLFKHLPYYTIIQDGTEPGDVIFQVSASDQDLGVNGAVTYAF----SEEY 2112

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV V+   N  +P+FQ
Sbjct: 2113 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIAQDGGTPSLQTTEEVLVIVR-NKSNPLFQ 2171

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2172 SPYYKVRVPENITLYTPI 2189



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V ++D+NDNAP         RLP  + P+          + ++ A+D D G+N  +TY
Sbjct: 1227 VVVCISDVNDNAPVFSHKLFNVRLPERLSPV------TPGPVYRLVASDLDEGLNGRVTY 1280

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F I P +G++ ++    AGE   +T+QATD+G    S+   + +  +P
Sbjct: 1281 SIEESDKEG---FSIHPVTGMVSSSNTFAAGEYNILTIQATDSGQPPLSASVRLHIEWIP 1337

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1338 QPRPSSIPLAFDEPHYSFTVMETDPVNHMVGVISV 1372



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 12/172 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEA-RRQIVKIEATDN 78
            + ++A+   G   S    +T+ + D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3082 YSLVAKATDGGGQSCQADVTLQVEDVNDNAPRFFPSHCAVAVFDNTTIKTPVAVVLARDP 3141

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGGK-- 134
            D G NA++ YS+    ++    F I+  +GVI     L  G Q +  +TV+A+D G    
Sbjct: 3142 DQGANAQVVYSL---PDSAEGHFSIEATTGVIRLEKPLRVGPQAALQLTVRASDLGAPIP 3198

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI-TVSRLAS 184
             S+   V +SVV G     PVF    + V V E A +   V  + T++R  S
Sbjct: 3199 LSTLGTVTISVV-GLEDYLPVFLNTEHSVQVPEDALLGMEVLQLATLTRPGS 3249



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   I  +       ++++ A D D G + +++Y +    
Sbjct: 2782 VSVNIQVKDVNDNRPIFEADPYKAILTENMPVGTAVIQVTANDQDTGKDGQVSYRLPMDP 2841

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
            ++ +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2842 DSNIHELFAIDSETGWITTLQELDCETRQTYHFYVVAYDHGRTIQLSSQVLVEVSIT-DE 2900

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2901 NDNAPKFASEDYRGSVIENSEPGEPVATL 2929



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN PR+  P+  P   +       +++++A 
Sbjct: 1102 YWLTVLAVDRGSVPLSAVTEVYIEVTDVNDNPPRMSRPVFYPSVQEDAPLHTSVLQLDAW 1161

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D     ++T++I   ++ G   F I P +G++ T  +L     +++ + V   D G  
Sbjct: 1162 DPDSSSKGKLTFNITSGNHMGF--FAIHPLTGLLSTARQLDRETKDEHILEVTVLDNGEP 1219

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            S ++   V V +   N  +PVF    ++V + E  S
Sbjct: 1220 SLRSTSRVVVCISDVNDNAPVFSHKLFNVRLPERLS 1255



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 15/174 (8%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQ 69
            P +    V+ R+++       V +++++ D N + PR         +P   +   E    
Sbjct: 1517 PSQHMLTVMVRDQEMPIRRNFVWVSIHVEDGNRHPPRFTQLHYEASVPDTTVPGTE---- 1572

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQ 127
            ++++ A D D G NAE+ YS+   ++ G   F I+   G+I    KL      + ++TV+
Sbjct: 1573 LLQVRAMDGDRGANAEVHYSLLKGNSEGF--FNINALLGIITLAQKLNQTNHARCTLTVK 1630

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G      +  V +   P+  S P+F +  Y V + E   + S +  ++ +
Sbjct: 1631 AEDQGSPRWHDLATVIIHVHPSESSAPIFSKAEYFVEIPESIPVGSPILLVSAT 1684



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V A+++ G      V +   L D NDNAP+       + I
Sbjct: 2536 ITTLKKLDRENSTERVIAIKVRAQDRGGKVGFCTVKII--LTDENDNAPQFKASEYTVSI 2593

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  + +       I+P +GV++    L+  E
Sbjct: 2594 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSIEDLHEQIIDINPTTGVVKVKESLVGLE 2653

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     ++V + +    N  S P F +  Y  + SE     S + ++
Sbjct: 2654 NQIFDLKIKAQDGGPPHWNSLVLLRLQVVDNEVSLPKFSEPLYTFSASEDLPEGSEIGSV 2713



 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 18   KFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIE 74
            K  F V A +  QG+ +   V + V   D+NDN P    ++    I  G  A+  ++++ 
Sbjct: 2237 KHVFTVRATDTAQGSFSEATVEVLVE--DVNDNPPTFSQLVYTTSISEGLPAQTPVIQLL 2294

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G N +++Y I    +     F+I+  +G + T  +L   + + + + V+A D G
Sbjct: 2295 ASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYESQQHFHVKVRAMDRG 2354

Query: 133  GK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                + +T+V V  V   N   P F+Q  Y+  VSE A
Sbjct: 2355 NPPLTGETLVVVG-VSDINDNPPEFRQPQYEATVSELA 2391



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 12/105 (11%)

Query: 39  LTVNLNDINDNAPRLPMIPP---IQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
           + V++ D ND  P     PP   + I    A +  I K+ ATD DLG NAE  Y+     
Sbjct: 134 VVVHILDQNDLKPLFS--PPSYRVTISEDMALKSPICKVTATDADLGQNAEFYYAF---- 187

Query: 95  NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
           NT    F I P SGV+   GKL      +Y + V A D   K S+
Sbjct: 188 NTRSEIFAIHPTSGVVTLAGKLNVTWRGKYDLQVLAVDRMRKISE 232



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F ID ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2212 LMLFTIDFKTGVLTVTGPLDYESKTKHVFTVRATDTAQGSFSEATVEV-LVEDVNDNPPT 2270

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2271 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2301



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPP--IQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTV++ D NDNAPR    PP   QI   E       I +++A D D   N  + Y++  +
Sbjct: 805 LTVHVKDCNDNAPRF---PPGGYQITISEDTGVGTTIAELKAKDADSDDNGRVRYTL--L 859

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 860 SPT--EKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPRKGHQ 903



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 31/154 (20%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPM-------IPPIQIQAGEARRQ 69
            +Q+  +   G A++   ++ +++ D N++AP   RL         IPP           
Sbjct: 427 HYQLHIKTSPGLAST---TVLIDIVDCNNHAPVFHRLSYAGTFDENIPP--------GSS 475

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI    +     F IDP  G+I TT  +   +    Y+  +
Sbjct: 476 VLTVTATDRDHGENGYVTYSIARPKDV---PFSIDPYLGIISTTKPMDYELMKRIYTFQI 532

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQ 157
           +A+D G    Q   EVSV   +   N   P+F++
Sbjct: 533 RASDWGSPFRQE-KEVSVSLMLNNLNDNKPMFEE 565



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   +      F++DP SGV+ T GKL       Q+ +
Sbjct: 1465 ELLRVQATDQDKGKG--LIYTIHGSQDPESASLFQLDPSSGVLVTVGKLDLSSGPSQHML 1522

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V VS+ V   N   P F Q  Y+ +V +
Sbjct: 1523 TVMVRDQEMPIRRNFVWVSIHVEDGNRHPPRFTQLHYEASVPD 1565



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 36   PVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            P  + + + D+ND+ PR    +     +       +++ + A+D+D    +E++YSI   
Sbjct: 1854 PAQVIIYIRDVNDSPPRFSDQIYEVTTVMPVHRGMELLTVWASDDD----SEVSYSIK-- 1907

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            +        I P  G I     ++ G    +T++A+D G      +V++S+    NT S 
Sbjct: 1908 TGNADEAIAIHPIDGRISVLNPILLGHSRELTIRASD-GLYQDTALVKISLTHALNT-SL 1965

Query: 154  VFQQNTYDVNVSE 166
             F QN Y   V E
Sbjct: 1966 QFDQNVYRATVKE 1978



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 10/139 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           IN +AP+     P  I   E       + ++ ATD D G N ++ Y I   +  G   F 
Sbjct: 706 INHHAPQFEDHFPQSIDILERVPLNTTLARLAATDPDTGFNGKLVYVIADGNEEGC--FD 763

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN 158
           I+  +G++     L   A   Y + V   D G   KSS  ++ V V    N  +P F   
Sbjct: 764 IELETGLLTVAAPLDYEATSFYILNVTVYDLGTPRKSSWKLLTVHV-KDCNDNAPRFPPG 822

Query: 159 TYDVNVSEGASINSTVATI 177
            Y + +SE   + +T+A +
Sbjct: 823 GYQITISEDTGVGTTIAEL 841



 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            Q++ + A D+D G++ E+ Y +     T L  F I+  +G+I+T   L       Y +TV
Sbjct: 1049 QVIVVTAHDDDSGLDGELQYFLR--DGTSLTAFSINQDTGMIQTLATLDREFVPCYWLTV 1106

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A D G      + EV + V   N   P   +  +  +V E A ++++V  +
Sbjct: 1107 LAVDRGSVPLSAVTEVYIEVTDVNDNPPRMSRPVFYPSVQEDAPLHTSVLQL 1158



 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 33/197 (16%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP---------RLPM- 55
            +LDR+  +  ++  +V AR+  ++G        LT+ L D+NDN+P         ++P  
Sbjct: 879  HLDRE--SEPQYILKVEARDQPRKGHQLFSVTDLTITLEDVNDNSPQCVTELSSLKVPED 936

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +PP  I        +  ++A D DLG   E+ + +    N     F +D  +G + T  K
Sbjct: 937  LPPGTI--------LTFLDAFDPDLGPAGEVQHVLL---NDAHGTFHVDLMTGAL-TLEK 984

Query: 116  LIAGEQ---YSITVQATDTGGK-SSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGA 168
             +  E+   Y++++ A+D G   + +T+  V V+      N   P F    +   V E +
Sbjct: 985  ELDFERRAGYNLSLWASDNGKPLARRTLCHVEVIVLDVNENLHPPRFDSFVHQGQVQENS 1044

Query: 169  SINSTVATITVSRLASG 185
               + V  +T     SG
Sbjct: 1045 PPGTQVIVVTAHDDDSG 1061


>gi|260802290|ref|XP_002596025.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
 gi|229281279|gb|EEN52037.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
          Length = 3422

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 12/186 (6%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K +LDR+  +   +   V A + +    +   ++ V + DIND  P     PP      E
Sbjct: 1952 KSSLDRETKD--SYELLVRATDDKIPQHTAYTTVAVTVTDINDQDPTFQS-PPYHFIVSE 2008

Query: 66   AR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGE 120
            A      +  + ATD DLG N EI YSI   ++   + F ID  +G I T G+L   A  
Sbjct: 2009 AATPGSAVGGVIATDMDLGKNGEILYSITADND---NVFSIDNTTGQITTVGQLDREATA 2065

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +Y+ITV+ATD G     T   V+V V   N   P F  +T++V + E   I S++  ++ 
Sbjct: 2066 EYNITVEATDMGSPPRNTTAMVTVSVEDVNDSPPKFSNSTFEVYIGETVRIGSSIFLLSA 2125

Query: 180  SRLASG 185
            +   SG
Sbjct: 2126 ADPDSG 2131



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 67/145 (46%), Gaps = 6/145 (4%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV--KIEATDNDLGVNAEITYSIYHVSN 95
           ++ + L D NDN+P              AR  +V  ++ ATD D G N +I YSI   S+
Sbjct: 716 TVLITLLDENDNSPTFTADEYNAAVPENARIGVVVTQVTATDRDSGTNGDIIYSIIFASS 775

Query: 96  TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
            G  KF I  R G I  +G L A   E Y + V A D G  S  T   V++ V   N   
Sbjct: 776 DGKDKFSI-SRDGNITVSGSLDADTVESYVVVVMAADQGAASRVTTAIVNINVTNVNDNK 834

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           P F Q  Y   VSE A   + VAT+
Sbjct: 835 PQFDQEQYTAQVSEAAGTGTVVATL 859



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV--KIEATDNDLGVNAEITYSIYHVSN 95
           ++ + L D NDN+P              A+  +V  ++ ATD D G N +I YSI   S+
Sbjct: 394 TVLITLLDENDNSPTFTADEYNAAVPENAKNGVVVTQVTATDRDSGTNGDILYSIIFASS 453

Query: 96  TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
            G  KF I    G I  +G L A   E Y + V A D G  S  T   V++ V   N   
Sbjct: 454 DGKDKFSI-STDGNITVSGSLDADTVESYVVVVMAADQGAASRVTTAIVNINVTNVNDNK 512

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           P F Q  Y   VSE A   + VAT+
Sbjct: 513 PQFGQEQYTAQVSEAAGTGTVVATL 537



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 10/149 (6%)

Query: 41   VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGL 98
            + + D+NDNAP     +  +++        +V  + ATD D G N  ITY+I  +S    
Sbjct: 1136 ITVTDVNDNAPEFTKDVYEVEVNETATNGTVVAMVMATDIDSGDNGNITYTI--ISGNEQ 1193

Query: 99   HKFRIDPRSG--VIETTGKLIAGEQ-YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
            + F ID  SG   +ETT     G + Y + V+A D G   +SS   V++ VV   N  +P
Sbjct: 1194 NTFAIDGGSGEITLETTLDHDQGNRSYQLVVEAKDAGTPIRSSTATVDILVV-NENDNTP 1252

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRL 182
            VFQ  TY+  V E    +S V  +  + L
Sbjct: 1253 VFQNTTYNFEVYENERRSSFVGMVRATDL 1281



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 24/184 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +++ E LDR+  +   F F V A++    T+ +   ++TV++ D NDN P   P    + 
Sbjct: 1725 IITTEVLDREG-DAASFTFTVFAQDNGMPTSLNSTATVTVSVTDENDNPPEFNPSTYHVS 1783

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSI-------YHVSNTGLHKFRIDPRSGVIE- 111
            I        +V +  ATD D G NAE+TYS+       + V + GL + R       +E 
Sbjct: 1784 ILEQSPIGMVVAETSATDADEGTNAELTYSLRGNGTKYFDVDDKGLVRMR---EILTVEK 1840

Query: 112  -TTGKLIAG---EQYSITVQ----ATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDV 162
             T   LI+G   E  S T++    ATD G        E+ V  G     +PVF  +TY+V
Sbjct: 1841 LTEEGLISGMVNETNSTTIRFSVVATDAGTPPLSGTAELFVTVGDVKDATPVFGNSTYNV 1900

Query: 163  NVSE 166
             V+E
Sbjct: 1901 RVAE 1904



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 29   QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGV 82
            Q   A+  V++TV   D NDNAP   +  P  I+A + R       ++V I ATD D G 
Sbjct: 2390 QALTATTTVNITVV--DQNDNAP---VFDPTNIEA-DVREDAALGAEVVVITATDADKGR 2443

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            NAE+   +Y + + G  KF +D  +G +   G L+     QY I V A D G
Sbjct: 2444 NAEL---LYFIHSGGDGKFALDNSTGNLTVAGDLMDFGSVQYEIVVYAEDMG 2492



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + +TV + D NDN P       ++    +A     +++++A+D D G NAE+TYS     
Sbjct: 2835 IVITVEVGDENDNPPVFSQSSYVKGIPDDAPIGYTVMQLQASDADTGSNAELTYSFV--- 2891

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV 145
             T   +F ++  +G + T       +G+++  TVQA D  G ++ T V V V+
Sbjct: 2892 GTKPEQFEVESSTGTLLTAISFAGSSGDKFKFTVQAEDQDGNTNSTEVTVFVL 2944



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT 96
            L V + D+NDN P L        I   E+   +V  I A+DND G N +I YSI   S+ 
Sbjct: 905  LIVTVQDVNDNFPVLNQTGYTFTIPEEESASYVVGTISASDNDTGSNGDILYSIKPSSS- 963

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV-PGPNTRSP 153
                F +D  +G I T  +L      Q    V A+D G  S      V+V+    N   P
Sbjct: 964  ---DFSVDQSTGQITTLQQLDRETSTQVQFVVVASDQGRPSLSFTATVTVILLDINDNLP 1020

Query: 154  VFQQNTYDVNVSE 166
            +F Q +Y V V E
Sbjct: 1021 IFTQQSYMVTVDE 1033



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 15/172 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +++   LDR+      F F V  ++ +G   +   S+TV + D NDN+P           
Sbjct: 1307 IITSALLDRE--TNSTFTFNVTVKDAEGMEDTA--SVTVVVLDENDNSPLFDR-ETYTTN 1361

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG-VIETTGKLIA 118
              E +     I+++ ATD D G N+ ITYSI   S      F ID R+G +   T K + 
Sbjct: 1362 VTEDKPGGGLILQVTATDEDEGSNSNITYSIR--SGNSDEVFYIDSRTGEIFLQTNKSLD 1419

Query: 119  GE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             E   +Y ++V+A D G      + +V++ V G N   P  ++  + V + E
Sbjct: 1420 YETTPEYRLSVKAQDGGESPRSDVADVTISVIGVNESPPQCKEQPFQVTLME 1471



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 15/189 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
            NLD +          V A +      S   ++T+++ D+NDNAP          Q  E  
Sbjct: 1623 NLDYESLQDPNITLTVTASDGGEVPNSAVSTVTISVTDVNDNAPEFDT-SHYNFQVSENM 1681

Query: 66   -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLI---AGE 120
             A   +  + A D D G N E++   Y++  +G    F I   +G I TT  L       
Sbjct: 1682 NASTLVGTVFAEDTDEGGNGEVS---YYLDPSGEEVPFNISKETGEIITTEVLDREGDAA 1738

Query: 121  QYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++ TV A D G     +S   V VSV    N   P F  +TY V++ E + I   VA  
Sbjct: 1739 SFTFTVFAQDNGMPTSLNSTATVTVSVT-DENDNPPEFNPSTYHVSILEQSPIGMVVAET 1797

Query: 178  TVSRLASGC 186
            + +    G 
Sbjct: 1798 SATDADEGT 1806



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 16/134 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +LTV++N     APR    P +++    A    ++VKI  TD D G N  IT +I   + 
Sbjct: 2195 TLTVHVN----RAPRYSRQPYLKVLRENATVGTEVVKILTTDPD-GDN--ITLNITDGNE 2247

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
             G+  F ID + GV+  +  L A   Q+ +TV ATD G    +  T V + V+P  N   
Sbjct: 2248 QGV--FSID-QMGVVSVSAALSASTFQHILTVTATDDGNPQMTRSTKVTIYVLPA-NVSL 2303

Query: 153  PVFQQNTYDVNVSE 166
            P F ++ YDV + E
Sbjct: 2304 PQFSKDLYDVTIPE 2317



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 30/209 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+     + +F V+A ++   + S   ++TV L DINDN P        + +
Sbjct: 974  ITTLQQLDRETST--QVQFVVVASDQGRPSLSFTATVTVILLDINDNLPIFTQQSYMVTV 1031

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITY-------SIYHVSNTGLHKFRIDP--RSG---- 108
                    ++ ++ TD D   N    Y       S++ +  T      + P  R G    
Sbjct: 1032 DENMTEPDLITLQTTDTDSDPNNNTNYIITEGDTSVFSIDQTTGRLSLVTPLDRDGGPAN 1091

Query: 109  ----VIETTGKLIAGEQ--------YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
                V+    +L  G           S+ V ATD G  +S  +V+++V    N  +P F 
Sbjct: 1092 FSLTVMAYNTELYDGSGDNDTATVVVSVQVLATD-GIHNSTAVVDITVT-DVNDNAPEFT 1149

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASG 185
            ++ Y+V V+E A+  + VA +  + + SG
Sbjct: 1150 KDVYEVEVNETATNGTVVAMVMATDIDSG 1178



 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 19/166 (11%)

Query: 23  VIAREKQGTAASVPVSLT-VNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDN 78
           V+    QG A+ V  ++  +N+ ++NDN P+         Q  EA      +  ++ATD 
Sbjct: 484 VVMAADQGAASRVTTAIVNINVTNVNDNKPQFGQ-EQYTAQVSEAAGTGTVVATLKATDG 542

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRI-DPRSG----VIETTGKLIAGEQYSITVQATD-TG 132
           D   +A++T+ I    +    +F + D R G    VI +       + Y+ITV+ +D T 
Sbjct: 543 DR--DAQLTFQI---EDGSFGQFNLSDARDGEVQVVISSELDREMTDSYNITVKVSDGTF 597

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++Q IV V  V   N   PV  Q  Y     E  S +  V TI+
Sbjct: 598 DATTQLIVTVQDV---NDNFPVMNQTGYTFTFPEEESASYVVGTIS 640


>gi|444723716|gb|ELW64355.1| Protocadherin Fat 2 [Tupaia chinensis]
          Length = 4521

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 15/179 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +  A+   V++ + + DINDN+P+   +    
Sbjct: 3145 WRISSRKTLDRE--HIAKYLLRITASDGKFQAS---VTVEIFVLDINDNSPQCSQVRE-D 3198

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            +  G     ++K+ ATD D   NA+ITYS++     G+++F++ P +G + T   L    
Sbjct: 3199 VSPGHL---VLKVSATDLDTDTNAQITYSLH---GPGVNEFKLHPHTGELTTLTALDRER 3252

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ + VA +
Sbjct: 3253 KDTYSLVAKATDGGGRSCQADVTLH-VEDVNDNAPRFFPSHCTVAVFDNTTVKTPVAVV 3310



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V + D+NDN P         RLP  + P+      +   + ++ A+D D G N +ITY
Sbjct: 1407 VVVRILDVNDNPPTFSHKLFNVRLPERLSPM------SPGPVYRLVASDPDEGFNGKITY 1460

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +G++ ++    AGE   +T++ATD G    S+   + +  +P
Sbjct: 1461 SIEESDEEG---FSIDPVTGMVSSSSTFAAGEYNILTIKATDNGQPPLSASVRLHIEWIP 1517

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1518 QPRPSSIPLAFDETHYSFTVMETDPVNHMVGVISV 1552



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 19/143 (13%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYS-----IYHV 93
            +++ D+NDN P+   +P   I Q G E    + ++ ATD DLG N  ITY+     IY  
Sbjct: 2237 ISVKDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGANGVITYAFAEDYIY-- 2294

Query: 94   SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
                   FRIDP  G   ++      A  +Y + V A D G  S QT  EV +V   N  
Sbjct: 2295 -------FRIDPYLGDITLKKPFDYQALNKYRLKVIAQDGGTPSLQTEEEV-LVTVRNKS 2346

Query: 152  SPVFQQNTYDVNVSEGASINSTV 174
            +P+FQ   Y V V E  ++ + +
Sbjct: 2347 NPLFQSPYYKVKVPENITLYTPI 2369



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            K+   +    K  ++ S   ++ VN+ D+N+  PR P  +     ++       I+ + A
Sbjct: 3461 KYFLSIECSRKGSSSLSDMTTIVVNITDVNEYRPRFPQELYDTRVLENAIVGDIILTVSA 3520

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N+ ITYS+  V    L  F + P++G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3521 TDEDGPLNSAITYSL--VGGNQLGHFTVHPKTGELQ-VAKALDWEQTSSYSLRLRATDSG 3577

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                     ++V V   N   P F Q  Y   V E + I S V  + +S
Sbjct: 3578 QPPLHEDTNITVQVVDVNDNPPRFFQLNYSTTVQENSPIGSKVLQLILS 3626



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 3248 LDRE----RKDTYSLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCTVAVFDNTTV 3303

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--I 124
            +  +  + A D D G NA++ YS+   +++    F ID  +GVI     L    Q +  +
Sbjct: 3304 KTPVAVVFARDPDQGTNAQVVYSL---TDSAEGHFSIDATTGVIRLEKPLQVKPQVALEL 3360

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G     PVF    + V V E A   S V   AT+T
Sbjct: 3361 TVRASDLGTPIPLSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDARPGSEVLHLATLT 3419



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 13/173 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            P +    V+ R+++       V +T+ + D N + P    +      P     G    ++
Sbjct: 1697 PSQHTLTVMVRDQEMPIKRNFVWVTIYVEDGNLHPPHFTQLHYEASVPDTTAPG---TEL 1753

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
            +++ A D+D G NAE+ YS+   ++ G   F I+   G+I    KL   +  Q+++TV+A
Sbjct: 1754 LQVRAADSDRGANAEVHYSLLKGNSEGF--FNINALLGIITVAQKLDQASHAQHTLTVKA 1811

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G      +  V +   P ++ +P+F +  Y V + E   + S +  ++ +
Sbjct: 1812 EDQGSPKRHDLATVIIHVYPSDSSAPIFSKAEYFVEIPESIPVGSPILLVSAT 1864



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            GT     VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++
Sbjct: 2955 GTDLVSLVSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGRDGQVS 3014

Query: 88   YSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVE 141
            Y +     + +H+ F ID +SG I T  +L     + +   V A D G     SSQ +VE
Sbjct: 3015 YRLSGEPGSNVHELFTIDSKSGWITTLQELDCETHQTHRFYVVAYDHGQPTQLSSQALVE 3074

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 3075 VSIT-DENDNAPRFASEDYRGSVIENSEPGELVATL 3109



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           V++ D ND  P L   P  ++   E    R  I K+ ATD DLG NAE  Y+     NT 
Sbjct: 277 VHILDQNDLRP-LFSPPSYRVTISEDLPLRSPICKVTATDADLGQNAEFYYAF----NTR 331

Query: 98  LHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
              F I P SGV+   GKL      +Y + V A D   K S+
Sbjct: 332 SEMFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVDRMRKISE 373



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 13/178 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + +
Sbjct: 2716 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSV 2773

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+            ++P +GV++    L+  E
Sbjct: 2774 QSNVSKDSPVIQVLAYDADEGQNADVTYSVDSTEELAEEIIEVNPITGVVKVKESLVGLE 2833

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASI 170
               +   ++A D G     ++V V +      +P P    P++  +  + ++ EG+ I
Sbjct: 2834 NRAFDFKIKAQDGGPPHWDSLVPVRLQVVSNEMPLPKFTEPLYTFSASE-DLPEGSEI 2890



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            LTVN+ D NDNAPR    PP   Q       E    I +++  D D   N  + Y++  +
Sbjct: 946  LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELKTKDADSEDNGRVRYTL--L 1000

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
            S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 1001 SPT--EKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPSKGHQ 1044



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A +K     S    + + + D+NDN PR+  P+  P  ++   +   ++++EA 
Sbjct: 1243 YWLTVLAVDKGSVPLSSVTEVYIEVMDVNDNPPRMSRPVFYPSILEDAPSGTSVLQLEAW 1302

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            D D     ++T++I   ++ G   F I P +G++ T  +L
Sbjct: 1303 DPDSISEGKLTFNITSGNHMGF--FAIHPFTGLLSTAQQL 1340



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 13/149 (8%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2436 TVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGKNRDVSYQIVEDGS 2495

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGP 148
                 F+I+  +G + T  +L   + + + + V+A D G     G++   +    V   P
Sbjct: 2496 NVSKFFQINGSTGEMSTVQELDYESQQHFHVKVRAMDRGDPPLTGETLVVVNVSDVNDNP 2555

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
                P F+Q  Y+ NVSE A+    V  +
Sbjct: 2556 ----PEFRQPQYEANVSELATCGHLVLKV 2580



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
           R+++  R   G A++   ++ V++ D N++AP              IPP           
Sbjct: 568 RYELHIRTSPGRAST---TVVVDIVDCNNHAPVFNRSSYEGTLDENIPP--------GTS 616

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  I YSI   +   +  F IDP  GVI T+  +   +    Y+  V
Sbjct: 617 VLTVTATDRDHGENGCIIYSI---AGPKVLPFSIDPYLGVISTSKPMDYELMKRIYNFRV 673

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    +   EVS+   +   N   PVF++     ++ +   I  +V T++
Sbjct: 674 RASDWGSPFRRE-REVSISLRLKNLNDNQPVFEEVNCTGSIRQDWPIGKSVMTVS 727



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2392 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2450

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2451 FSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 2481



 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLP-MIPPIQIQA-GEARRQIVKI 73
            F+F V   + QG A   A  P  + +N+ D+ND+ PR    I  + +        +++ +
Sbjct: 2015 FQFSVYVHD-QGNAILFAPRPAQVIINIGDVNDSPPRFSDQIYEVAVMGPTHPGMELLVV 2073

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
            +A+D+D    +E+TYSI   +        I P +G I      + G    +T++A+D G 
Sbjct: 2074 QASDDD----SEVTYSIK--TGNADDAVAIHPITGRISVLNPALLGLSRKLTIRASD-GL 2126

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                 +V++S     + +S  F Q+ Y  +V E
Sbjct: 2127 YQDTALVKISFTEILD-KSLQFHQDVYRASVEE 2158



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            Q++ + A D+D G++ E+ YS+   + T L  F I+  +G+I+T   L       Y +TV
Sbjct: 1190 QVMIVAARDDDSGLDGELQYSLR--AGTSLAAFSINQDTGMIQTMAPLDREFASYYWLTV 1247

Query: 127  QATDTGGKSSQTIVEVSV 144
             A D G     ++ EV +
Sbjct: 1248 LAVDKGSVPLSSVTEVYI 1265



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 31/160 (19%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------- 51
            LVV+  +LDR+  +  ++  +V AR++  +G        L V L D NDN+P        
Sbjct: 1015 LVVTG-HLDRE--SEPQYILKVEARDQPSKGHQLFSVTDLLVTLEDANDNSPQCITEHSS 1071

Query: 52   -RLPM-IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV 109
             ++P  +PP  I        +  ++A+D DLG   E+ Y +    N     FR+D  +G 
Sbjct: 1072 LKVPEDLPPGTI--------LTFLDASDPDLGPAGEVRYVLL---NDAHGTFRVDLMTGA 1120

Query: 110  IETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVV 145
            +    +L   +Q  Y++++ A+D GG+  + +T+  V V+
Sbjct: 1121 LSLERELDFEKQAGYNLSLWASD-GGRPLARRTLCHVEVI 1159



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++A D D G    + Y+I+   +      F++DP SGV+ T GKL       Q+++
Sbjct: 1645 ELLQVQAMDQDKGKG--LIYTIHGSQDPESASLFQLDPSSGVLVTVGKLDLSSGPSQHTL 1702

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            TV   D      +  V V++ V   N   P F Q  Y+ +V
Sbjct: 1703 TVMVRDQEMPIKRNFVWVTIYVEDGNLHPPHFTQLHYEASV 1743



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 15/116 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
           + ++ ATD D G N ++ Y +   +  G   F I+  +G++        ETT   +    
Sbjct: 874 LARLAATDPDAGFNGKLVYVVADGNEEGC--FDIELETGLLTVAAPLDYETTSFYV---- 927

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ITV    T  KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +
Sbjct: 928 LNITVYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAEL 982


>gi|268559922|ref|XP_002646095.1| C. briggsae CBR-HMR-1 protein [Caenorhabditis briggsae]
          Length = 2921

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)

Query: 38  SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQ---IVKIEATDNDLGVNAEITYSI 90
           +L + + D+N+N P  P         +I  G  +     IVK+EATD+D   N +I YS+
Sbjct: 847 TLLIGIEDVNNNKPEFPDCARYSEIAKIMEGTYKSDPPTIVKVEATDDDSSANGDIVYSL 906

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-V 145
           Y+  +     F ID  +GV+  +  ++   +      +TV+ATD G +      + SV V
Sbjct: 907 YYTQSESRKAFVIDRHTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV 966

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P F++ +Y+ +VS   +I ++V T+
Sbjct: 967 VDVNDNAPQFERPSYETSVSRFEAIGTSVITV 998



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ----- 60
            LDRDPP     + F V A +  G        + VN+ DINDN+P  P  +   I+     
Sbjct: 1500 LDRDPPTGVPSWNFVVQAIDDDGMGLVGYADVQVNVRDINDNSPIFPERLFGFIEENREP 1559

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT---GLHKFRIDPRSGVIETTGKL- 116
            I +       V+    D+    NA I Y I  V N    G   FRID  +G I     L 
Sbjct: 1560 IHSDGVYFMDVQARDFDDPTTENANIEYGI--VRNKLIDGEPVFRIDQNTGKIFAMRSLD 1617

Query: 117  --IAGE-QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              +A E ++ I V+A D G  S +    V++ V   N  +P F++  Y+ +V E A I +
Sbjct: 1618 REMASEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGA 1677

Query: 173  TVATIT 178
             V + +
Sbjct: 1678 AVMSFS 1683



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    DP  P   +F+V ARE    +    V+L + + D+NDN P     P    Q 
Sbjct: 595 LTKELDYDDPALPKSHQFKVTAREDNRESH---VALRIRIEDVNDNVPMFTR-PLYTAQV 650

Query: 64  GE---ARRQIVKIEATDNDLGVNAEITYSI----YHVSNTG-LHKFRID 104
            E     + I+K+ A D D G NA ITYS+    + ++  G + K R+D
Sbjct: 651 REDIPLNQTILKVTAIDKDSGENARITYSLDNQNFSINENGEIAKIRLD 699



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 17/166 (10%)

Query: 30  GTAASVPVSLTVNLNDIND-----NAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGV 82
           G  +S   ++ +++ D+++     N+P LPM+   P+    G   R I +  A D +   
Sbjct: 397 GLQSSRTQTIRIHVEDVDEPPSFVNSP-LPMLAVVPLNPTIG---RIIYQFVARDENGDG 452

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYSITVQATDT--GGKSSQTI 139
           ++ + Y    V   G   F +D +SGV+ T   K   GE Y I++QA D      S+  +
Sbjct: 453 DSNVQYKEIDVIPAG--SFSVDSKSGVVRTGWSKYEKGETYRISIQAIDMTPSDNSTSQL 510

Query: 140 VEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            EV+++    + R P F +  Y+V VSE   ++ +V  +      S
Sbjct: 511 SEVAILEILADERPPQFAKQEYEVAVSEDILVDYSVVDVKAQSFRS 556


>gi|158295627|ref|XP_316322.4| AGAP006256-PA [Anopheles gambiae str. PEST]
 gi|157016127|gb|EAA10759.5| AGAP006256-PA [Anopheles gambiae str. PEST]
          Length = 1821

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)

Query: 3   VVSKENLDRDPPN--PGKFRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP 57
           V+    LD D P+     FRFQ++A    E++ TA     ++TV L D NDN+P  P   
Sbjct: 447 VLDSSRLDYDVPSEEAKTFRFQLVASVDGEEKSTA-----NVTVRLQDANDNSPTFPQ-A 500

Query: 58  PIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              +Q  E   Q   I  + ATD+D G+  ++ Y+   V   G   FR  P  G +    
Sbjct: 501 SYSLQVRENSPQGFKIADLSATDHDAGMFGQLAYA---VKGFGAEFFRTHPTEGGLYVER 557

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           +L   EQ  YS+ + A D GG+ +   V + V+   N   P F+   Y   + EGA+
Sbjct: 558 QLDYEEQKSYSLALVARDGGGRETNANVFIDVM-DENDNHPAFEALEYTRTIREGAT 613



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 32/139 (23%)

Query: 22   QVIAREKQGTAASVPVS----------------LTVNLNDINDNAPRL------PMIPPI 59
            QV+ REKQ     + V+                + V++ D+NDNAP         +IP  
Sbjct: 1134 QVLDREKQSVLKLIVVAEDAPGRPQDAKKATTEVMVDVLDVNDNAPIFGQRSYTAVIPEN 1193

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
             +        ++ I A D D G+  E+ Y I +     GL   +I+P++G I+T   L  
Sbjct: 1194 VL----VDTFVIAITAHDPDEGLGGEVRYDILNEGEANGL--LQINPKTGEIKTKAMLTG 1247

Query: 119  ---GEQYSITVQATDTGGK 134
                E Y + ++A D+GG+
Sbjct: 1248 KGRAEPYELVIRAQDSGGQ 1266



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-----GKLIAGEQYSI 124
           + ++ ATD D G++  + Y I   S+     F I+  +G+I  T      +    E Y+I
Sbjct: 741 VTQVSATDPD-GLDELLRYKIVGASD----NFVINDLTGLITVTRDARLDRDTNPESYAI 795

Query: 125 TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V A D G    +++ T V V +    N + P F Q +Y   VSE ++I+S V  +T
Sbjct: 796 VVNAIDAGFPIPETATTTVHVKI-QDINDKPPKFTQQSYTAYVSERSAIDSEVLRVT 851


>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 3 [Sarcophilus harrisii]
          Length = 3975

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ + E LDR+  +   FR   +       +A+  V++TV   D ND+AP        Q 
Sbjct: 234 LISTAEPLDRESMDLHYFRVTALDHGSPRLSATTMVAVTVA--DRNDHAPVFE-----QA 286

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           +  E  R+       I+++ ATD D   NA I Y            F IDPRSG+I T+G
Sbjct: 287 EYRETIRENVEEGYPILQLRATDGDAAANANIRYRFVD-PPAAQAVFEIDPRSGLITTSG 345

Query: 115 KLI--AGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           ++     E Y + V+A+D GG    +S+   V ++V+   N  +P F +  Y   V E  
Sbjct: 346 RVDREQKENYELAVEASDQGGEPGPRSATVRVHITVL-DENDNAPQFSEKRYLAQVREDV 404

Query: 169 SINSTVATITVSRL 182
             ++ V  +T + L
Sbjct: 405 RPHTEVLRVTATDL 418



 Score = 63.5 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 41  VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           + +ND+NDNAP+      P +  +       +++I ATD D   N  + Y+ +     G 
Sbjct: 795 IMVNDVNDNAPQFVASYYPGVISEDAPPFTSVLQISATDRDAHANGRVQYT-FQNGEDGD 853

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             F I+P SG++ T  +L   +   Y +T  A D G    +T V + V V   N  +PVF
Sbjct: 854 GDFTIEPTSGIVRTVRRLDRESVPVYELTAYAVDRGVPPLRTPVNIQVTVQDVNDNAPVF 913

Query: 156 QQNTYDVNVSEGASINSTVATIT 178
               ++V V E + + S VA IT
Sbjct: 914 PAEEFEVRVKENSIVGSVVAQIT 936



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     +V I ATD+D+G NA ITY +       
Sbjct: 692 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTVVVISATDDDVGENARITYLL----EDN 746

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I    +L   +Q  Y++ + A D G   K+  T VE+ +V   N  +P
Sbjct: 747 LPQFRIDVDSGAITLQAELDYEDQVTYTLAITAKDNGIPQKADTTYVEI-MVNDVNDNAP 805

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   +SE A   ++V  I+ +
Sbjct: 806 QFVASYYPGVISEDAPPFTSVLQISAT 832



 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 24/190 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRLPMIPPI 59
           L+ +   +DR+      +   V A ++ G     S  V + + + D NDNAP+      +
Sbjct: 340 LITTSGRVDREQKE--NYELAVEASDQGGEPGPRSATVRVHITVLDENDNAPQFSEKRYL 397

Query: 60  QIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
                + R   +++++ ATD D   NA + Y+I  +S      F ID  +G I+    L 
Sbjct: 398 AQVREDVRPHTEVLRVTATDLDKDTNALVHYNI--ISGNSRGHFAIDSLTGEIQVVAPLD 455

Query: 118 --AGEQYSITVQATDTG--------GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
                +Y++ ++A D+G        G +S  +V++      N  +P+F    + V+V E 
Sbjct: 456 FEVEREYALRIRAQDSGRPPLSNNTGLASIQVVDI------NDHAPIFVSTPFQVSVLEN 509

Query: 168 ASINSTVATI 177
           A +  +V  I
Sbjct: 510 APLGHSVIHI 519



 Score = 45.4 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    QA  A  Q     ++ + A D D G    ++YS+  + N+  L  FRI
Sbjct: 169 ANRHPHFPQYNYQALVAENQAPGTSVLSVAAQDPDAGEAGRLSYSMAALMNSRSLDLFRI 228

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           D  SG+I T   L   + + +   V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 229 DAASGLISTAEPLDRESMDLHYFRVTALDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAE 287

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 288 YRETIRENVEEGYPILQLRAT 308



 Score = 42.0 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PV++ V + D+NDNAP  P     +++  E       + +I A D D G NA+I Y I  
Sbjct: 896  PVNIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAIDPDEGPNAQIMYQI-- 952

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG + T   L      +Y I VQAT +    S+  V + ++   N 
Sbjct: 953  VEGNIPELFQMDIFSGELTTLIDLDYEMRPEYVIVVQAT-SAPLVSRATVHIRLI-DQND 1010

Query: 151  RSPVFQ 156
             SPV +
Sbjct: 1011 NSPVLK 1016



 Score = 42.0 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 16/179 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V A +      S   S+T+ + D+NDN P         ++  E   
Sbjct: 560 LDRESVE--HYFFGVEALDHGSPPLSASASVTITVMDVNDNRPEFTQ-KEYHLRLNEDAA 616

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---- 121
               ++ + A D D  +N+ I+Y I        ++F I  + G+   T  L    +    
Sbjct: 617 VGTSVLSVTAVDRD--INSAISYQI--TGGNTRNRFAISTQGGMGLVTLALPLDYKQERY 672

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           Y + V A+D         V +++    NT  PVFQ   Y V+V+E   + STV  I+ +
Sbjct: 673 YKLIVTASDRT-LHDNCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTVVVISAT 729


>gi|61162132|dbj|BAD91055.1| Af2-cadherin [Artemia franciscana]
          Length = 3005

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD P+   ++RF V A+++ G        + VNL DINDNAP  P+        + G 
Sbjct: 1460 LDRDQPHGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPLGVYFGNVTENGT 1519

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA++TYSI       NTG   F I+P +GVI+T    +  
Sbjct: 1520 AGMVVMTMTAVDYDDPNEGANAKLTYSIEKNVIDENTGTPIFEIEPETGVIKTAVCCLDR 1579

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   Y+I V A D  G        +  V   N   P F ++ +  +V+ +EG  +  T 
Sbjct: 1580 EKTPDYAIQVVAMDGTGLKGTGTASIR-VKDINDMPPQFSKSEWYTEVDETEGTLLPDTP 1638

Query: 174  VATITV 179
            + T+TV
Sbjct: 1639 ILTVTV 1644



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 583 LAKELDFEDLRQPHIYSLVVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQSHN 640

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            E        I+K++ATD D G NAEI YS+          F++D + GVI    +L A 
Sbjct: 641 VEEDLPIGTSILKVKATDADSGDNAEIEYSVSD------DNFQVD-QKGVISNARQLDAD 693

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y  TV A D G         V +     N   P F Q  Y  NV E A  ++ V 
Sbjct: 694 NNNAYYEFTVTAKDKGEPPKTGTATVRIYTRNKNDEEPKFSQTVYTPNVDENAGPSTLVT 753

Query: 176 TITVS 180
           T+  S
Sbjct: 754 TVVAS 758



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 39  LTVNLNDINDNAPRLPMI----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           + V + D+NDN P         P I+ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 828 VVVFITDVNDNKPIFHDCSTYSPKIE-EGAPNGSPVIKVHATDADKGVNGQVKYSIVQQP 886

Query: 95  NTGLHKFRIDPRSGVIETTGKLIA----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
           N    KF +D  +G + T          G+  S+TV+ATD G  S + +   +V +   N
Sbjct: 887 NQKGTKFTVDEETGEVYTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVN 946

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P+F +  Y  NV +  +I + +  ++ S
Sbjct: 947 DNPPLFDRQKYVENVKQDTTIGTNILRVSAS 977


>gi|332836068|ref|XP_003313012.1| PREDICTED: protocadherin-16 [Pan troglodytes]
          Length = 3305

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 434 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPAFDRQLYRP 491

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 492 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 545

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  +TV ATD G     +   V+V +   N   P FQ+  Y+ ++ EG   
Sbjct: 546 ASLDYELEPQPQLTVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFYNASLPEGTQP 605

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 606 GTCFLQVTATDADSG 620



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2151 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2209

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2210 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2267

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2268 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2322



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1647 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTY--- 1698

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
                     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1699 --GGVSSESFSLDPDTGVLTTLRALDREEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDE 1756

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1757 NDHAPTFGSAHLSLEVPEG 1775



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ A +    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1833 FQLRIEAWDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1891

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1892 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAA 1948

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1949 AGPLSTTVSVTITVRDVNDHAPTF 1972



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 894  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 946

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 947  AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHDLELEARDGGSPPRTSHFRLRVVVQDVGTR 1006

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 1007 GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1034



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 15/154 (9%)

Query: 39  LTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           L V L DIND+AP     R   +    +  G     ++++ A+D D GVN  +TY I   
Sbjct: 253 LDVTLLDINDHAPAFNQSRYHAVVSESLAPGSP---VLQVFASDADAGVNGAVTYEINRR 309

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            + G   F ID  +G+++    L   ++  + + VQA D G         V+V V   N 
Sbjct: 310 QSEGDGPFSIDAHTGLLQLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDAND 369

Query: 151 RSP----VFQQNTYDVNVSEGASINSTVATITVS 180
             P    +F        VSE A     VA I+VS
Sbjct: 370 NQPSMTVIFLSADGSPQVSEAAPPGQLVARISVS 403



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1136 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1194

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
              D G   +S+   V V+V+   N  SP F Q
Sbjct: 1195 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1225



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1548 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1597

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L   +  ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1598 SGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1656

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E +   +++ T+
Sbjct: 1657 EAPTFQQQEYSVLLRENSPPGTSLLTL 1683



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2679 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2735

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2736 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2789

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2790 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2833



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1747 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1806

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1807 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEAWDGGQPALSATLLLTVTVLDANDHA 1864

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1865 PAFPVPAYSVEVPE 1878


>gi|195388068|ref|XP_002052712.1| GJ20209 [Drosophila virilis]
 gi|194149169|gb|EDW64867.1| GJ20209 [Drosophila virilis]
          Length = 3220

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P  +      + G 
Sbjct: 1751 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 1810

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 1811 AGSPVMTMSAIDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 1870

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 1871 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWFTEVDETNGTHIPETP 1929

Query: 174  VATITV 179
            + T+TV
Sbjct: 1930 ILTVTV 1935



 Score = 44.7 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI--- 90
            ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I Y +   
Sbjct: 1665 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQ 1724

Query: 91   -YHVSNTGLHKFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVEVSV 144
                 NT   KF I+  +G I     L   +     Q+  TV A D GG+      ++ V
Sbjct: 1725 GIDPDNTANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQV 1784

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +   N  +P F Q  Y  NV+E  +  S V T++
Sbjct: 1785 NLKDINDNAPQFPQGIYFGNVTENGTAGSPVMTMS 1819



 Score = 41.6 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 11/156 (7%)

Query: 12   DPPNPGKFRFQVIAREKQGTAAS---VPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            DP     FRF++   +K    A    V  S + V L DINDN PR      I++   E  
Sbjct: 1981 DPLQSSGFRFRIQVNDKGEDGADKYHVAYSWVVVKLRDINDNVPRFER-DHIEVSIYEDT 2039

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYS 123
            +    + +  A+D D G ++ ++Y I   SN    +F I  +  V I+        +++ 
Sbjct: 2040 KVGTILEQFRASDADQGGHSRVSYKIVRASNR-RRQFAISEKGAVSIQRPLDRETADRHH 2098

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
            I V A+D G  S      ++V V   N  +P   Q+
Sbjct: 2099 IQVLASDDGNPSRTATATLTVIVKDVNDNAPTLAQD 2134



 Score = 37.7 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  +   QV+A +    + +   +LTV + D+NDNAP L       +    + R
Sbjct: 2089 LDRETAD--RHHIQVLASDDGNPSRTATATLTVIVKDVNDNAPTLAQDYRPTLPENVSPR 2146

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP 105
            +I+++ A D D               N G   FR+DP
Sbjct: 2147 KIIEVAAKDAD----------DRQRGNGGPFSFRLDP 2173


>gi|115666275|ref|XP_785445.2| PREDICTED: protein dachsous-like [Strongylocentrotus purpuratus]
          Length = 3342

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 17/187 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEA 66
            LDR+  +   +   + A ++  +  S   ++ V + D+NDN P    +   +   ++   
Sbjct: 1823 LDRE--DEATYTLTITATDQGTSPRSGTTTIRVTVTDLNDNDPVFGSMSYYKSIPESTAI 1880

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               I+ + ATD+D G+N ++ Y++    NT +  F IDP  G I TTGK    ++  Y+ 
Sbjct: 1881 NATILTVVATDDDEGLNGDVYYTL---DNTTIGLFSIDPEHGEITTTGKFDYEKETRYTF 1937

Query: 125  TVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             V ATD+G      +  Q I+++S V   N  +PVF+      NV++ AS N+ VA +  
Sbjct: 1938 QVTATDSGVFGPRSERVQVIIDISDV---NDNAPVFKTIPIRANVTQDASSNTFVANVEA 1994

Query: 180  SRLASGC 186
                SG 
Sbjct: 1995 DDKDSGV 2001



 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 7/138 (5%)

Query: 39  LTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LT+ + D+NDN P   LP+     I+A E    + ++ ATD D GVNA+I Y I      
Sbjct: 491 LTIAVTDVNDNPPIFDLPLYHATIIEASEPGTPVKQVHATDADEGVNAQIIYRISPEGTD 550

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
               F I+P SG++ T  K+   E  S+  TV A+D G    SS  I+ +++    N   
Sbjct: 551 YSDWFEINPMSGLVTTLQKVDREETGSVFLTVIASDEGEISLSSSVIINITIT-DVNDNQ 609

Query: 153 PVFQQNTYDVNVSEGASI 170
           PVF   +Y+ ++ E   I
Sbjct: 610 PVFFPGSYNASILEEQEI 627



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 18/154 (11%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIY--HV 93
            L V + D NDNAP        Q+   E  +    +V + A+D D+G+NAE+TYS    H 
Sbjct: 2374 LEVIVTDENDNAPVFRQ-ESYQVTLPELTQPNVAVVAVNASDKDIGLNAELTYSFVDSHP 2432

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ----ATDTGGKSSQTIVEVSV-VPGP 148
            S      F IDP +GVI  T ++I       T+Q    ATD+G  +    V V + +   
Sbjct: 2433 S------FYIDPITGVI-FTNQVIEFNDVETTIQLYVTATDSGAPALSEFVTVRIEITDV 2485

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            N +SPVF ++ Y  +VSE  S+   V T+    +
Sbjct: 2486 NNQSPVFVEDIYSASVSENVSLGHHVITVVAEDM 2519



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            ++LTV + D+NDN P   M   P+ I +       +V++EATDND G NA ITY++    
Sbjct: 1015 LTLTVIILDVNDNGPVFTMGFYPVSILENLPISTPVVQVEATDNDRGANALITYTL--TP 1072

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            N     F + PR G + T   L       +++T+ A+D+G   ++S   V+V+VV   N 
Sbjct: 1073 NNDSPYFAVFPREGWLYTRQVLDRELKSTFTLTIMASDSGSPPQNSSATVQVTVVDA-ND 1131

Query: 151  RSPVFQQNTYDVNVSE 166
             +P F + +Y  +++E
Sbjct: 1132 NAPHFTKKSYHFHINE 1147



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
           LDRD     ++ F V A +  G  +   V   V L DINDN P    +     I+   A 
Sbjct: 677 LDRDAGQE-EYNFAVKATDGGGLMSHAFVR--VILEDINDNVPVFTSLNYRGHIEYDAAL 733

Query: 68  RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
              VK + A D D      +TY+I   +N G   F I+  +G+I   G L   +   Y++
Sbjct: 734 GTEVKLVVAEDRDAREFGRVTYTIDSSTNDG--TFAINQTTGLITLVGSLDWVQHPVYTL 791

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            V ATD GG++S    +V++ V GP+T  P F+ ++Y  +V E A+
Sbjct: 792 EVIATDGGGRTSANHAQVTITVAGPDTSPPEFESSSYAFSVQENAA 837



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 15/192 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MI 56
            V  +  LDR+     +F  Q   R  +   ASV V +T+ + D N+  P  P      ++
Sbjct: 2655 VTVRGELDREEVERVEFTVQASDRGMENQLASV-VLVTITITDFNEFPPYFPQLFYHFLV 2713

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGK 115
            P    +       +    A DND G   E+TYSI  +  + G   F IDP +G + T   
Sbjct: 2714 P----ENMPVETYVFTAGALDNDAGEYGELTYSIRGLGPSNGDDYFTIDPVTGEVFTAAV 2769

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                +   Y   VQA DTGG S     EV++    +   P+F    Y   + +GA     
Sbjct: 2770 FDYESANSYRFVVQAQDTGGLSISIQTEVNIT-SVDEFPPMFNDQEYYFEIGDGADAGDY 2828

Query: 174  VATITVSRLASG 185
            V  +T +    G
Sbjct: 2829 VGQVTATDADGG 2840



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 80/169 (47%), Gaps = 16/169 (9%)

Query: 18   KFRFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            ++ FQV A +  G     S  V + ++++D+NDNAP    IP      Q   +   +  +
Sbjct: 1934 RYTFQVTATDS-GVFGPRSERVQVIIDISDVNDNAPVFKTIPIRANVTQDASSNTFVANV 1992

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTG 132
            EA D D GVN E+ Y     S++    F ID  +GVI TT  L  G   Y + V A D G
Sbjct: 1993 EADDKDSGVNGEVNYRFTQQSSS----FAIDTVTGVI-TTKSLNPGTLFYHLEVMAFDLG 2047

Query: 133  GK--SSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTVATIT 178
                SS  IVEV V  G +    + F Q TY V  SE A     V +++
Sbjct: 2048 SPSLSSNGIVEVWV--GTSGSGGLQFGQQTYLVQPSEAADNGDVVLSLS 2094



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV + + +DR+    G     VIA ++   + S  V + + + D+NDN P   +  P   
Sbjct: 563 LVTTLQKVDRE--ETGSVFLTVIASDEGEISLSSSVIINITITDVNDNQP---VFFPGSY 617

Query: 62  QAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGL----HKFRIDPRSG---V 109
            A     Q      +++ ATD D G   ++TYS     +T L     +F I+P +G   V
Sbjct: 618 NASILEEQEIPYCFLQVNATDPDEGSAGQVTYS----PSTDLVPTPSQFSINPLTGDLCV 673

Query: 110 IETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           I    +    E+Y+  V+ATD GG  S   V V ++   N   PVF    Y  ++   A+
Sbjct: 674 ISRLDRDAGQEEYNFAVKATDGGGLMSHAFVRV-ILEDINDNVPVFTSLNYRGHIEYDAA 732

Query: 170 INSTVATI 177
           + + V  +
Sbjct: 733 LGTEVKLV 740



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 16/192 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
             + +++ LDR+  +   F   ++A +      +   ++ V + D NDNAP          
Sbjct: 1087 WLYTRQVLDRELKS--TFTLTIMASDSGSPPQNSSATVQVTVVDANDNAPHFTK-KSYHF 1143

Query: 62   QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
               E   A  ++ ++EA D DLG N ++TY++   S +G   F ID   GVI TT  L  
Sbjct: 1144 HINENLPAGTEVDRVEAVDPDLGPNGQVTYTL---SPSG--DFTID-EEGVIRTTHPLDR 1197

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN-TYDVNVSEGASINSTV 174
             A   Y + ++A D G  +  +   V + V   N  +PVF Q+ TY  +V E       V
Sbjct: 1198 EAAYSYRLIIRAVDGGNPALSSSATVYINVNDLNDNAPVFSQDRTYQASVREEQPAGEFV 1257

Query: 175  ATITVSRLASGC 186
            A I  +   SG 
Sbjct: 1258 AWIIATDTDSGV 1269



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            ++ V + D+NDN P     PP   I +   ++   I    ATD D G N ++ YSI    
Sbjct: 1746 TVLVYVMDVNDNNPTFA--PPTFDITLPENQSPGVIHNAIATDADEGPNGDLIYSI--TG 1801

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
                + F I+  +G I T G L   ++  Y++T+ ATD G   +S  T + V+V    N 
Sbjct: 1802 GDPKNAFSINQSTGAIFTVGALDREDEATYTLTITATDQGTSPRSGTTTIRVTVT-DLND 1860

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              PVF   +Y  ++ E  +IN+T+ T+
Sbjct: 1861 NDPVFGSMSYYKSIPESTAINATILTV 1887



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE- 65
            LDR+      + +++I R   G   A S   ++ +N+ND+NDNAP        Q    E 
Sbjct: 1195 LDRE----AAYSYRLIIRAVDGGNPALSSSATVYINVNDLNDNAPVFSQDRTYQASVREE 1250

Query: 66   --ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
              A   +  I ATD D GV   I+YS+   S     KF ID  SGVI T   +   ++  
Sbjct: 1251 QPAGEFVAWIIATDTDSGVLGNISYSLIDSS----PKFIID-SSGVISTAAAIDREDESY 1305

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TV A D G    Q    V V +   N   P+   + Y     E     + V  ++ S
Sbjct: 1306 YTLTVLAQDGGNPPMQATASVRVRILDLNDNVPIAAMSAYIFTADENIQPPTVVGVVSAS 1365

Query: 181  RLASG 185
             +  G
Sbjct: 1366 DMDVG 1370



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 14/147 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            + + + DIND++P   +   +Q +        A   I+ + ATD D+G N E+ YSI  +
Sbjct: 2584 VVIEVEDINDHSP---IFDHVQYEGRIAENATASTYILTVHATDRDIGYNGEVEYSI--I 2638

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSS-QTIVEVSV-VPGPN 149
            S T    F ID  SG +   G+L     E+   TVQA+D G ++   ++V V++ +   N
Sbjct: 2639 SGTYSDLFAIDVVSGAVTVRGELDREEVERVEFTVQASDRGMENQLASVVLVTITITDFN 2698

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVAT 176
               P F Q  Y   V E   + + V T
Sbjct: 2699 EFPPYFPQLFYHFLVPENMPVETYVFT 2725



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 10/182 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            +V + ++LD +  +   +   V+AR+      +   ++ + + D+NDN P    + P+ +
Sbjct: 2239 IVTTAKSLDYEIED--SYVLTVVARDGGSPQLTGTATMRIGIVDVNDNQPVFVQMDPVSV 2296

Query: 62   QAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                     +  + ATD+D   N  I YS     N G + F ID  SG+I     L    
Sbjct: 2297 SEDLGVGLSVTTVTATDSD--TNPNIQYSFTSTGNPGGY-FAIDQYSGIITLARSLDRET 2353

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Q  Y++ ++ATDT   ++ T+ EV +V   N  +PVF+Q +Y V + E    N  V  + 
Sbjct: 2354 QDGYTLELEATDTEYTTTMTL-EV-IVTDENDNAPVFRQESYQVTLPELTQPNVAVVAVN 2411

Query: 179  VS 180
             S
Sbjct: 2412 AS 2413



 Score = 42.7 bits (99), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 23   VIAREKQGTAASVPV-SLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDND 79
            VI     GT   +   +LT+ + D+ND  PR    I  + +   +A    V  + A D D
Sbjct: 1625 VILATDHGTVQRMATQTLTIRVIDVNDQPPRFEQSIYVMNVSESQAPGTYVGMVVAIDGD 1684

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
             GVN  ITY +      G+  FRI+  +G I T   L   ++  Y +TV A D    +  
Sbjct: 1685 SGVNGRITYELPEEIARGM--FRINATTGEIRTKAILDREQRDSYVVTVYAMDGAFPARY 1742

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS---INSTVAT 176
             +  V V V   N  +P F   T+D+ + E  S   I++ +AT
Sbjct: 1743 DMATVLVYVMDVNDNNPTFAPPTFDITLPENQSPGVIHNAIAT 1785



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 20/154 (12%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVS 94
            ++ V L D NDNAP+  +    Q +  E       + ++ ATD D G N  I Y +   S
Sbjct: 2168 TVQVELTDANDNAPQF-VQDRYQSRVWEVPNSDIYVTQVSATDADEGTNGAIYYEV--TS 2224

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG-----GKSSQTIVEVSVVP 146
                + F ID  +G++ TT K +  E    Y +TV A D G     G ++  I  V V  
Sbjct: 2225 GNTDNAFAIDHVTGIV-TTAKSLDYEIEDSYVLTVVARDGGSPQLTGTATMRIGIVDV-- 2281

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              N   PVF Q    V+VSE   +  +V T+T +
Sbjct: 2282 --NDNQPVFVQMD-PVSVSEDLGVGLSVTTVTAT 2312



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            ++ V + D NDN P         +   E     ++ I ATD D G N  + Y+I   +  
Sbjct: 1537 TVEVRIYDSNDNNPVFVSRSSTDVMEDEPVGFNVIHIIATDEDSGENGRVGYTITSGNED 1596

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G  KF +D  +G++     L    +  Y + + ATD G         +++ V   N + P
Sbjct: 1597 G--KFSLDAVTGLLTIAHSLDHEHKRDYELVILATDHGTVQRMATQTLTIRVIDVNDQPP 1654

Query: 154  VFQQNTYDVNVSE 166
             F+Q+ Y +NVSE
Sbjct: 1655 RFEQSIYVMNVSE 1667



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 20/190 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQ 60
           +V  + LDR+  +     + +I     G    +  + TVN+   D+NDN+P   +     
Sbjct: 240 IVVNKTLDRETIS----MYTLIIEAYDGGDPRLTANTTVNIKVTDVNDNSPVFTLTSFTA 295

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              ++      ++++ A+D D G+N E+ +++    + G   FRIDP SG++     L  
Sbjct: 296 TINESAPVNTTVLQVTASDEDEGLNGEVVFNLQR--DDGF--FRIDPASGIVYLNKVLNY 351

Query: 117 --IAGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
                  + +  Q       SSQ    +I+ +++   P +   +F  +     VSE A  
Sbjct: 352 EDAQAHDFLVIAQDKAEPPMSSQPAYVSIMVININEKPPSLEVLFLPDGGASQVSEAAVA 411

Query: 171 NSTVATITVS 180
           ++T+A I+V+
Sbjct: 412 DTTLARISVT 421



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 27/194 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     +F   V A E         + +T+ LND NDN P          +  EA +
Sbjct: 137 LDRETAPDQEFVIIVFAGEM-----FTALVVTIRLNDTNDNNPIFSQ-DNRTFEVTEAVQ 190

Query: 69  ----QIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKFRIDPR---SGVIE--TTGKLI 117
               +I  + ATD D G+N    Y I   ++ NT    F +D R   +GV       K +
Sbjct: 191 PYMTKINGVTATDADEGINGIQGYRIVGGNIDNT----FDLDVRVRETGVYMDIVVNKTL 246

Query: 118 AGE---QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             E    Y++ ++A D G    ++ T V + V    N  SPVF   ++   ++E A +N+
Sbjct: 247 DRETISMYTLIIEAYDGGDPRLTANTTVNIKVT-DVNDNSPVFTLTSFTATINESAPVNT 305

Query: 173 TVATITVSRLASGC 186
           TV  +T S    G 
Sbjct: 306 TVLQVTASDEDEGL 319


>gi|338713124|ref|XP_001917610.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Equus
            caballus]
          Length = 4351

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+     K+  ++ A + +  A+   V + + + DINDN+P+   +    
Sbjct: 2966 WRIFSRKTLDRE--QMAKYLLRITASDGKFQAS---VLVEIFVLDINDNSPQCSQL---- 3016

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3017 LYTGKVSEDVSPGHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGELTTLT 3073

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3074 ALDREKKDVYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3132

Query: 173  TVATI 177
             VA +
Sbjct: 3133 PVAVV 3137



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN P    +P   I Q G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2058 VFVQDVNDNHPEFKHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FR+DP  G I         A  +Y + V A D G  S QT  EV V+   N  +P+FQ
Sbjct: 2114 TYFRMDPYLGDISLRKPFDYQALNKYHLKVIARDGGTPSLQTEEEVIVIVR-NKSNPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 10/172 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVK 72
            NP K+   +    K  ++ S   ++ VN+ D N++ PR    +     ++       ++ 
Sbjct: 3286 NP-KYFLSIECSRKGSSSLSDMTTIVVNITDTNEHRPRFLQDLYSTRVLENAVVGDLVLT 3344

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQAT 129
            + ATD D  VN+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ V+AT
Sbjct: 3345 VSATDEDGPVNSAITYSL--VGGNQLGHFTIHPKKGELK-VAKALDWEQTSSYSLRVRAT 3401

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G        ++++ V   N   P F Q  Y  +V E + + S V  + +S
Sbjct: 3402 DNGRPPLHEDTDITIQVVDVNDNPPRFFQLNYSTSVQENSPVGSKVLQLILS 3453



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 3075 LDRE----KKDVYSLVAKATDGGGQSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTV 3130

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--I 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI     L    Q +  +
Sbjct: 3131 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLQVRPQAAXEL 3187

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G +   P+F    + V V E A + + V   AT+T
Sbjct: 3188 TVRASDLGTPIPLSTLGTVTVSVV-GLDDYLPMFLNTEHSVQVPEDAQLGTEVLQLATLT 3246



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + +
Sbjct: 2537 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSV 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  + +       I+P +GV++    L+  E
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSMEDLDEEVVEINPTTGVVKVKESLVGLE 2654

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     ++V + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2655 NRAFDLKIKAQDGGPPHWNSLVLLRLQVVPNEVSLPKFSEPLYSFSASEDLPEGSEIGSV 2714



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++++ A D D G NAE+ YS+   ++ G   F ID   G+I    KL      QY++TV
Sbjct: 1573 ELLQVRAMDGDRGDNAEVHYSLLKGNSEGF--FNIDALLGIITLAQKLGKTNHVQYTLTV 1630

Query: 127  QATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +A D G      +  V +   P ++ +P+F +  Y V + E   + S +  ++ +
Sbjct: 1631 KAEDQGSPQWHDLATVIIHVYPSDSSAPIFSKAEYFVEIPESIPVGSPILLVSAA 1685



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 23/191 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
            L+ +   LDR+  N  +   +V  ++    +      + V + D+NDN P         R
Sbjct: 1193 LLSTARQLDRE--NKDEHILEVTVQDNGEPSLRSTSRVVVRILDVNDNPPVFSHKLFNVR 1250

Query: 53   LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            LP     ++  G     + ++ A+D D G+N  +TYSI    + G   F IDP +GV+ +
Sbjct: 1251 LPE----RLSPGTPG-PVYRLVASDLDEGLNGRVTYSIEESDDEG---FSIDPVTGVVSS 1302

Query: 113  TGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            +    AG    +T++ATD G      S +  +E    P P++    F +  Y   V E  
Sbjct: 1303 SSTFKAGVYNILTIKATDNGQPPLSASVRLHIEWIPPPRPSSIPLAFDELHYRFTVMETD 1362

Query: 169  SINSTVATITV 179
             +N  V  I+V
Sbjct: 1363 PVNHMVGVISV 1373



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            Q++ + A D+D G++ E+ YS+   + TGL  F ID  +GVI T   L       Y +TV
Sbjct: 1050 QVMGVTAHDDDSGLDGELQYSLR--AGTGLAAFSIDQDTGVILTLAPLDREFVSCYWLTV 1107

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D+G     ++ EV + V   N  SP   +  +  +V E A + ++V  +
Sbjct: 1108 QAVDSGSVPLSSVTEVYIEVMDVNDNSPRMSRPVFYPSVREDAPLYTSVLQL 1159



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2783 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTTVIQVTANDQDTGNDGQVSYRLPVDP 2842

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2843 GSNIHELFAIDSETGWITTLQELDCETRQTYRFYVVAYDHGRTIQLSSQVLVEVSIT-DE 2901

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2902 NDNAPQFASEDYRGSVVENSEPGEPVATL 2930



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P     +    I  G  A+  ++++ A D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDINDNPPTFSQSVYTTSISEGLPAQTPVIQLLAFDQDSGQNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ V++ D N++AP              IPP           
Sbjct: 428 HYQLHIRASPGLAST---TVVVDIVDCNNHAPIFNRSSYEGTFDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI    +     F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLTVTATDRDHGENGYVTYSIARPKSV---PFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F++    V + E   +  +V T++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLRNLNDNRPMFEEVNCTVAIREDWPVGKSVMTVS 587



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+  +       F++DP SGV+ T GKL  G     +++
Sbjct: 1466 ELLRVQATDQDEGKG--LIYTIHGSLDPRSASLFQLDPSSGVLVTVGKLDLGSGLSWHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V VS+ V   N   P F Q  Y+ NV++
Sbjct: 1524 TVMVRDQEMPIKRNFVWVSIHVEDGNLHPPRFTQLHYETNVTD 1566



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    I +++A D D   N  + Y++   
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQVTISEDTEIGTTIAELKAKDADSEDNGRVRYTLLSP 862

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           ++    KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 863 TD----KFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPRKGHQ 904



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 11/147 (7%)

Query: 32   AASVPVS----LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            + SVP+S    + + + D+NDN+PR+  P+  P   +       +++++A D D     +
Sbjct: 1112 SGSVPLSSVTEVYIEVMDVNDNSPRMSRPVFYPSVREDAPLYTSVLQLDAWDPDSSSKGK 1171

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVS 143
            +T++I   ++ G   F + P +G++ T  +L     +++ + V   D G  S ++   V 
Sbjct: 1172 LTFNITGGNHMGF--FVVHPLTGLLSTARQLDRENKDEHILEVTVQDNGEPSLRSTSRVV 1229

Query: 144  V-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            V +   N   PVF    ++V + E  S
Sbjct: 1230 VRILDVNDNPPVFSHKLFNVRLPERLS 1256



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 31/196 (15%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLPM---------- 55
            +LDR+  +  ++  +V AR+  ++G        LT+ L D NDN+P+  M          
Sbjct: 880  HLDRE--SEPQYILKVEARDQPRKGHQLFSVTDLTITLEDANDNSPQCIMELHSLKVPED 937

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +PP  +        +  ++A D DLG   E+ Y++    +     F +DP +GV+    +
Sbjct: 938  LPPGTV--------LTFLDAYDPDLGPAGEVQYTLL---DDARGTFHVDPSTGVLSLEKE 986

Query: 116  LIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGAS 169
            L    +  Y++++  +D+G    + +   VEV V+    N   P F    +   V E + 
Sbjct: 987  LDFERRAGYNLSLWVSDSGRPLARRTLCHVEVIVLDVNENLHPPRFASFVHQGQVQENSP 1046

Query: 170  INSTVATITVSRLASG 185
              + V  +T     SG
Sbjct: 1047 SGTQVMGVTAHDDDSG 1062



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
           T    F I P SGV+   GK       +Y + V A D   K S+
Sbjct: 189 TRSEMFAIHPTSGVVTLAGKFNVTWRGKYELQVLAVDRMRKISE 232



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  +++ TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LRLFTTDFKTGVLTVTGPLDYESKTKHTFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2271

Query: 155  FQQNTYDVNVSEG 167
            F Q+ Y  ++SEG
Sbjct: 2272 FSQSVYTTSISEG 2284



 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I+  +G++     L   A   Y + V 
Sbjct: 734 LARLAATDPDTGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATSFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y V +SE   I +T+A +
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQVTISEDTEIGTTIAEL 842



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQ 156
            +FR+DPR+G++     L      +Y ++++ +  G  S   +  + V +   N   P F 
Sbjct: 3265 RFRLDPRTGILYVNRSLDFETNPKYFLSIECSRKGSSSLSDMTTIVVNITDTNEHRPRFL 3324

Query: 157  QNTYDVNVSEGASINSTVATITVS 180
            Q+ Y   V E A +   V T++ +
Sbjct: 3325 QDLYSTRVLENAVVGDLVLTVSAT 3348


>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3762

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 108/199 (54%), Gaps = 14/199 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + ++  + LDR+  +  +   +V+A + +  A+   VS+ V++ DINDN+P+   +   +
Sbjct: 2915 WGLILTQPLDREVKD--RHALRVMATDGKFQAS---VSVDVHVLDINDNSPQCEQLVYTE 2969

Query: 61   --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
              ++   + R ++K+ A D D+G N +++YS+ H  N    KF ++ R+G + T   L  
Sbjct: 2970 AVMENSPSSRFVLKVSAVDPDVGANGQVSYSL-HGPNA--DKFHLNYRTGELLTLAVLDR 3026

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             A  +Y++  +ATD GG+S Q+ + + ++   N   P F  + Y + V +  ++++ +A 
Sbjct: 3027 EAEPEYNLVAKATDGGGRSCQSDI-LLMIQDMNDNPPRFSSSHYQLTVFDNTTVHTPIAV 3085

Query: 177  ITVSRLASGCAIMNKEENS 195
            +  ++    C+  + +E S
Sbjct: 3086 L-YAKDPDTCSFFSLDEFS 3103



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 20/179 (11%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPM---IPP----IQIQAG 64
            +   V  R  + T + +  ++ VN+ D+NDNAP       R+ +   +PP    +++ A 
Sbjct: 3226 YYLSVEGRRGKQTLSDI-TTVMVNVTDVNDNAPVFEEGGYRVEIKEDLPPGSLVMKVPAQ 3284

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
            E      K+ A+D D   N+ + YSI  VS   L +F I PRSG I     L   E   Y
Sbjct: 3285 EPPVFGGKVTASDQDGPSNSLLRYSI--VSGDPLQQFSIHPRSGEISVAAALDREEVPHY 3342

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S+TVQA D G     + + V++ V   N   P+F +  + + + EG  + S+V  + V+
Sbjct: 3343 SLTVQAADGGDPPLSSAILVTITVADVNDNPPIFSRVNHSLLLQEGEPVGSSVLQLVVT 3401



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 15/166 (9%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEA 75
            +V+  +    + S   ++ + + D NDN P+         IP  +  AGE  +++ ++ A
Sbjct: 1168 EVVVSDNGSPSLSSTTTVVIRVLDDNDNQPKFTDKLFHIKIPEQRRSAGE--QEVYRMVA 1225

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--- 132
             D+D G NA +TY +    +    +F+IDP  GV+   G    G    +TV+ATD G   
Sbjct: 1226 RDDDRGSNAAVTYRL---QDDHSERFKIDPLLGVVTARGDFWPGNYSILTVKATDQGSPP 1282

Query: 133  -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +++  VE   +P P+     F++  +   V E   +   V  I
Sbjct: 1283 RSSTARLDVEWIALPPPSDEPISFEEPHFTFAVMETEPVTHMVGII 1328



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 9/148 (6%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI-QAGEARRQIVKIEATDNDL 80
            V+ R+ +    +    + V ++D+ND+ P+   +P  I I ++ E    + +  A D DL
Sbjct: 1984 VMVRDTRTPPRTARAQVRVFIDDVNDSPPQFSNLPFSIVIPESSEPGDVLYQASAVDGDL 2043

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G NA I YS+          FRIDP +G I     L   A  +Y +TV A D G  S   
Sbjct: 2044 GENASILYSL----EEDYSLFRIDPHAGDISLQRPLDFEALNKYVLTVLAVDEGEPSHSA 2099

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              ++S+    N  SPVFQ   Y + V E
Sbjct: 2100 TAQLSLQVR-NQSSPVFQTLLYPLKVPE 2126



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 15/141 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++V+ + LD +  +  +++F V A   +  A  V     + + D NDN+P+   P     
Sbjct: 379 VIVTTQKLDYE--SKRRYQFDVAANGGEAEARVV-----IEVKDENDNSPQFASPSYEAS 431

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--- 116
             +       ++++ ATD D G NA +TY++   +N+G   F I P +GVI T+G L   
Sbjct: 432 LDENAPVGSSVLQVSATDADGGKNAFVTYAL---ANSGPSPFTIHPFTGVISTSGHLDYE 488

Query: 117 IAGEQYSITVQATDTGGKSSQ 137
           +   +Y + V A+D+G   S+
Sbjct: 489 LMRRRYHLRVWASDSGSPFSR 509



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 15/176 (8%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEA 75
            ++  V+A+    GTA +  VS+++ + D+NDN P     P     A    A   ++++ A
Sbjct: 2707 YQIDVMAQGNHNGTAVASLVSISIQVQDVNDNEPLFDASPYRAFLAENMPAGTTVIQVTA 2766

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK------FRIDPRSGVIETT--GKLIAGEQYSITVQ 127
             D D   N  +TYS+  +      +      F ID  SG I TT      A   Y  +V 
Sbjct: 2767 NDADSETNGLVTYSLEALPEEEEEEAGATEMFSIDEESGWITTTQEADCEAVRVYRFSVV 2826

Query: 128  ATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ATD GG    SS  +VEV+V    N   P F    Y  +V E +S    + ++T +
Sbjct: 2827 ATDNGGGLRLSSSVLVEVTVT-DENDNPPKFSLEAYRGSVVENSSPGEVLVSMTTA 2881



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+ + + D+NDNAP         +  +       +V++ A+D D G N ++T+ +     
Sbjct: 2201 SVEIEVEDVNDNAPVFSQRAYGAVVAEGLPVGTSVVQVSASDGDSGRNRDLTFHMLRTER 2260

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
                 F IDP +GVI  T +++  E   Q+ + ++ATD G    SS+  V V+V    N 
Sbjct: 2261 NETEFFDIDPHTGVI-VTKQVLDHEGTNQFHLKIRATDNGTAPLSSEASVLVNVT-DVND 2318

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              P F  + Y+  + E A     V  I  S   SG
Sbjct: 2319 NPPDFVSSQYEATLDEKAKCGHIVIKIQASDPDSG 2353



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +V+ + LDR+ P       +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2481 MVTTQPLDRENPAQRIIAVKVMAKDGGGKVAFCTVRII--LTDENDNVPQFAASEYQVSI 2538

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+   +   +V I A D D G NA++TY++            I+P +G++     L+  E
Sbjct: 2539 QSTVNKGSPVVHIMAYDADEGRNADVTYTVDEAEEATEDVIEINPFTGLVTVKDSLVGME 2598

Query: 121  Q--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               ++  VQA D      ++   V+V V+P P    P F +  Y  +  E A + + + +
Sbjct: 2599 NRIFNFKVQARDGSLPFYNATVPVQVRVLP-PEVPLPQFSEPLYTFSAVEDAPVGTEIGS 2657

Query: 177  I 177
            +
Sbjct: 2658 V 2658



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 11/142 (7%)

Query: 47   NDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            NDN PR LP    I++ +       ++ +E+ D DL     +TY++    N     FR+D
Sbjct: 877  NDNPPRFLPHNYKIKVPEDLPVGTLLLWVESVDLDLASGGLVTYNL---KNPEGGSFRLD 933

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQN 158
              +G +    +L    +  Y++TV+A D G     SS   VE+ V+    N   P+F + 
Sbjct: 934  SSTGALTLERELDFERRRSYTLTVRAVDHGLPRSLSSSCFVEIEVLDVNENLHRPLFSEF 993

Query: 159  TYDVNVSEGASINSTVATITVS 180
             Y+  V E A++ ++V  +T S
Sbjct: 994  VYEAAVMEDAAVGTSVLKLTAS 1015



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 10/177 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++V+K+ LD +  N  +F  ++ A +      S   S+ VN+ D+NDN P          
Sbjct: 2274 VIVTKQVLDHEGTN--QFHLKIRATDNGTAPLSSEASVLVNVTDVNDNPPDFVSSQYEAT 2331

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +  +    ++KI+A+D D G   ++ Y I    N G + F I+  SG++  +      
Sbjct: 2332 LDEKAKCGHIVIKIQASDPDSGDLNKLQYKILS-GNEGRY-FNINQSSGIVSFSNVCRRN 2389

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +  Y++TV  +D G       V + ++   N  SP F+Q+ Y+  ++E A + + V
Sbjct: 2390 LEPFYNLTVAVSD-GVFQKTARVNIDML-STNKHSPSFKQSVYEAELAENAEVGTQV 2444



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 41  VNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V + D ND  P   P    + I +  E R  +V + ATD D+G NA+  YS      +  
Sbjct: 104 VRVLDANDLKPLFYPASYSVSIAEDAELRSSVVTVSATDADVGSNADFYYSF----TSRA 159

Query: 99  HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSS 136
           H F +DP +G +    KL     ++Y +TV A D   K S
Sbjct: 160 HPFAVDPFTGTVSLVRKLNHTRSQRYELTVLAEDRTKKIS 199



 Score = 42.4 bits (98), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 45   DINDNAPRLPMIPPIQIQAGEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            D+NDNAP+L    P+   + +        + ++ ATD D     ++++   H+  +    
Sbjct: 1087 DVNDNAPQLSQ--PVYFASVQENVDGVGSVAQVWATDADASSEGKLSF---HMLESHRTH 1141

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQ 157
            F +DP++GV+ T   L     E++S+ V  +D G  S S T   V  V   N   P F  
Sbjct: 1142 FDVDPKTGVVSTLSALDREEKEEHSVEVVVSDNGSPSLSSTTTVVIRVLDDNDNQPKFTD 1201

Query: 158  NTYDVNVSE 166
              + + + E
Sbjct: 1202 KLFHIKIPE 1210



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 20/176 (11%)

Query: 17   GKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVK 72
             ++RF V  R+  +    A+ P  +TV + D+ND AP    P+     I       ++  
Sbjct: 1778 AEYRFSVQVRDSGEPCRYAAEPAKVTVRVLDLNDCAPHFTSPVYESSVILPAVRGMEVTH 1837

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            + A D D  V        Y +    LH  F ++P SG+I  +        Y + ++A+D 
Sbjct: 1838 VTARDADSAV-------AYSIVEGNLHGAFSVEPSSGLITVSNATGFTGFYQLVLRASDG 1890

Query: 132  GGKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
              +   T+ V  S + G +     F+Q+ Y V+V+E      T+A +     A GC
Sbjct: 1891 LHQDLATVRVNGSALTGGHLG---FEQDVYTVSVAENLRTVRTLAALK----ARGC 1939



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           FRI+P +GVI TT KL   +  +Y   V A + G   ++ ++EV      N  SP F   
Sbjct: 371 FRINPLTGVIVTTQKLDYESKRRYQFDV-AANGGEAEARVVIEVK---DENDNSPQFASP 426

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
           +Y+ ++ E A + S+V  ++ +    G
Sbjct: 427 SYEASLDENAPVGSSVLQVSATDADGG 453



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%)

Query: 45   DINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+N+N  R P+      +A           ++K+ A+D D+G + E  + I     +GL 
Sbjct: 980  DVNENLHR-PLFSEFVYEAAVMEDAAVGTSVLKLTASDKDVGRDGEFRFHIQ--DGSGLG 1036

Query: 100  KFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             F ID  +GVI  + K++  E+   Y ++V   D G +   +   V + V   N  +P  
Sbjct: 1037 VFSIDEETGVI-CSAKILDREKMPHYWLSVLVGDLGTEPLLSWTHVFLRVLDVNDNAPQL 1095

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             Q  Y  +V E      +VA +
Sbjct: 1096 SQPVYFASVQENVDGVGSVAQV 1117


>gi|44890274|gb|AAH66823.1| Pcdhgb7 protein [Mus musculus]
          Length = 931

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 21/159 (13%)

Query: 39  LTVNLNDINDNAP---------RLPM-IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           L + + D NDN P         RLP  +PP           +++++A D D G+NAE TY
Sbjct: 228 LRIRVVDANDNPPVFSQDLYRVRLPEDLPP--------GTTVLRLKAMDQDEGINAEFTY 279

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVP 146
           S   V+N G H+F ++P +G I T   L     E+Y+I V+A D G  SSQ  V + V+ 
Sbjct: 280 SFLGVANKGQHEFSLNPLTGDIVTLQSLDFEEVERYTIGVEAKDRGSLSSQCKVIIEVLD 339

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + R  +   +  D  +SE +   + VA   V    SG
Sbjct: 340 ENDNRPEIIITSLSD-QISEDSPSGTVVALFKVRDRDSG 377



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F+  + AR++   A S  VS+ V + D NDNAPR+  P + P       +  +A E    
Sbjct: 528 FQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPTLEPDGSALFDMVPRAAEPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + K+ A D D G NA ++Y +   S+ GL  F +  R+G + T   L
Sbjct: 588 VTKVVAVDADSGHNAWLSYHVLQASDPGL--FSLGLRTGEVRTARAL 632



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 17/157 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEAT 76
           R+ +    K   + S    + + + D NDN P + +I  +  Q  E   +   +   +  
Sbjct: 314 RYTIGVEAKDRGSLSSQCKVIIEVLDENDNRPEI-IITSLSDQISEDSPSGTVVALFKVR 372

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQ---YSITVQATDT 131
           D D G NAE+  S+     +G + F+I   S       T  ++  EQ   Y++T+ ATD 
Sbjct: 373 DRDSGENAEVMCSL-----SGNNPFKIHSSSNNYYKLVTDSILDREQTPGYNVTITATDR 427

Query: 132 GGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           G    SS T + ++V    N  +PVFQQ  Y +NV+E
Sbjct: 428 GKPPLSSSTTITLNVA-DVNDNAPVFQQQAYLINVAE 463



 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 13/156 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V+   LDR+   PG +   + A ++     S   ++T+N+ D+NDNAP       + 
Sbjct: 402 YKLVTDSILDREQ-TPG-YNVTITATDRGKPPLSSSTTITLNVADVNDNAPVFQQQAYL- 458

Query: 61  IQAGEARR---QIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTG 114
           I   E  +    I +++A D D+G N  ++YSI    +    L  F  ++  SGV+    
Sbjct: 459 INVAENNQPGTSITQVKAWDPDVGSNGLVSYSIIASDLEPKALSSFVSVNQDSGVVYAQ- 517

Query: 115 KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPG 147
           +    EQ   + +T+QA D G  +    V + V+ G
Sbjct: 518 RAFDHEQIRSFQLTLQARDQGSPALSANVSMRVLVG 553


>gi|345308127|ref|XP_001507828.2| PREDICTED: cadherin-18-like [Ornithorhynchus anatinus]
          Length = 796

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P   + G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMAEMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
             Q G A   + KI+A D D G NA++ Y+I +    G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMKYTIINGDGAGIFSISTDKETREGILSLKKPLN 336

Query: 117 ----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                     I G    +  + +  G     T++++ V  G     P+F + +Y + V E
Sbjct: 337 YEKKKSYILNIEGANTHLDFRFSHLGPFKDVTMLKIIV--GDVDEPPLFTKPSYIMEVYE 394

Query: 167 GASINSTVATIT 178
            A I + V T+T
Sbjct: 395 NAKIGTVVGTVT 406


>gi|156368057|ref|XP_001627513.1| predicted protein [Nematostella vectensis]
 gi|156214425|gb|EDO35413.1| predicted protein [Nematostella vectensis]
          Length = 1781

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 11/149 (7%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +T+ + D+NDNAP         +   E       ++ + ATD D G NA+++Y+ Y  S+
Sbjct: 1   VTITVQDVNDNAPVFTS-DEFTVSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGSH 59

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
              +KF ID  SG I TTG       + YSI V A+D G   KSS  +V V+V    N  
Sbjct: 60  G--NKFAIDASSGRIYTTGTFDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADN-NDN 116

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
           SP F    Y  +++E A++ +++ T++ S
Sbjct: 117 SPKFPALHYVFDIAEDAAVGASIGTVSAS 145



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 8/178 (4%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQA 63
           +  NLDR+     +F  +V+A +          ++TV L D+NDN P   M     ++  
Sbjct: 282 TARNLDRE--TTPRFTLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSE 339

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
           G     IV + A D D+G +  +TY I      GL  F I+  +G I  T KL      +
Sbjct: 340 GVVESNIVTVVAEDRDIGSDGSVTYCITQGREGGL--FVINENTGTIGITAKLDRETKSK 397

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           Y++ VQATD G  +  +  +V V V   N  +PVF   T  V V E     +TV  ++
Sbjct: 398 YTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGSGTTVIKVS 455



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 11/174 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
            DR+  +   +   V A +    + S    + V + D NDN+P+ P +  +   A +A  
Sbjct: 78  FDRETKD--DYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAEDAAV 135

Query: 68  -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              I  + A+D D+G NA +TYSI          F ++P +G I T G+ +   G  YSI
Sbjct: 136 GASIGTVSASDADIGENARLTYSIVSPEKA---TFSMNPVTGEI-TVGQRLDREGANYSI 191

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V ATD G       +E++V V   N   PVF  +   V + E AS  + + T+
Sbjct: 192 RVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIITL 245



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ- 60
             V +   LDR+     ++R  V A +      +   +L V L+DINDN P L  +P I  
Sbjct: 1011 FVRTAAELDREAI--AEYRLTVTATDNGTPPMTGNATLVVTLDDINDNPPHLTPLPCIGR 1068

Query: 61   -IQAGEARRQIVKIEATDNDLGVN-AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              +      Q++ + A D DL  N     YSI   S +    FR++  SGV+ T   L  
Sbjct: 1069 VTENKPQGTQVMTLNAEDPDLNPNRGPFKYSI---SGSDYGSFRLNVSSGVVSTVKSLDR 1125

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             +Q  Y+I+++ TD  G S+     + V    + R     ++ Y V+  EG  +   VA 
Sbjct: 1126 EKQDAYNISIKVTDARGLSAVNFCMIHVEDQNDNRPKATSRDVY-VHTFEGKFLGGVVAD 1184

Query: 177  I-----TVSRLASGCAIMNKEEN 194
            +      +  L + CA++N  +N
Sbjct: 1185 VRPDDPDIDDLMT-CALLNPPQN 1206



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 8/173 (4%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
           PNP  +   V AR           ++ + + D ND+AP     +     +Q   +   I 
Sbjct: 489 PNPNIYNLTVRARNIYPPHYKADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGVSIG 548

Query: 72  KIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQA 128
           ++EA D  D G NA + Y    +S  G  +FR+ P +G  +I ++ +    + Y I V+A
Sbjct: 549 RVEAVDKFDYGPNALVRYEA--ISGNGTGRFRVAPETGEVLIASSLRDDVNKTYYIRVRA 606

Query: 129 TDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +D G  K S T      V   N   PVF +  Y  + +E  ++ S + T+T +
Sbjct: 607 SDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQTSENEDIAVGSALLTVTAT 659



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 11/176 (6%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQI-QAG 64
           + LDR+  N   +  +V A +      S  + +TV ++D ND+ P  L  I  + I +  
Sbjct: 180 QRLDREGAN---YSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENA 236

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
               +I+ ++A D D GVNAEI Y+   V+    + F I+  +G + T   L      ++
Sbjct: 237 SPGTEIITLQAVDGDSGVNAEIRYAF--VTGNSNNSFTINSITGRLRTARNLDRETTPRF 294

Query: 123 SITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ V A D G     ++  V+VV    N   PVF  + Y   VSEG  + S + T+
Sbjct: 295 TLEVLAYDLGVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSEGV-VESNIVTV 349



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR 67
           LDR+  +  K+  +V A +    A S    + VN+ D ND+AP   P    +++Q     
Sbjct: 390 LDRETKS--KYTLRVQATDGGSPALSSEADVIVNVLDQNDHAPVFTPATLTVKVQEDTGS 447

Query: 68  -RQIVKIEATDNDLGVNAEITYS 89
              ++K+ A D D+G NA++TYS
Sbjct: 448 GTTVIKVSAVDGDVGSNADVTYS 470



 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ + ATD D G N EI+Y I  ++      F I   +G +  +  L    Q  YS+ V 
Sbjct: 653 LLTVTATDRDFGRNGEISYDI--IAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVS 710

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
           ATD G   K+S   V ++ +   N  +PVF    Y   ++E  +  S V
Sbjct: 711 ATDGGKEPKTSYATVRIT-LRDVNDNNPVFSPIEYRCELAENTTPRSVV 758


>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
          Length = 3468

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 19/186 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           +V +  +LDR+  +   FR  VIA +      S   +L VN+ D ND+ P       +  
Sbjct: 419 IVTTAASLDRELMDVHYFR--VIATDDSFPPRSGTTTLQVNVLDCNDHTPSFESEEFLAS 476

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-------HKFRIDPRSGVIE 111
           I+ +       ++ I ATD D+G NA+I Y+I  ++  G          FRID RSG I 
Sbjct: 477 IR-EGVSVGSTVITIRATDQDIGKNADIEYAILSINGDGSATNGQDEQAFRIDARSGTIS 535

Query: 112 TTGKLI--AGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
           T   L     E Y + V A+D       + S T   +  +   N   P F + TY V VS
Sbjct: 536 TRSALDRETSEMYKLIVSASDMATLQTERRSATATVIVKILDDNDNYPQFSERTYTVQVS 595

Query: 166 EGASIN 171
           E    N
Sbjct: 596 EDQWTN 601



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 9/168 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          +++      IV+++A 
Sbjct: 658 YRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYNIVRVQAY 717

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-- 132
           D+D G N+EI+Y+I    +       +D R+G I TT  L   E  +YS  V A D G  
Sbjct: 718 DSDEGANSEISYNIQDRDDN--LPLAVDSRTGWIHTTKPLDREERSRYSFQVIAMDGGIP 775

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            KS+ T V V+ +   N   P F    Y+  ++E     + V T+T +
Sbjct: 776 PKSASTSVVVT-IQDVNDNDPTFSPKYYEATIAEDQPPGTPVTTVTAT 822



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +N+ D N+ AP     P      +       ++ + ATD+D+GVNA+ITY +   S  GL
Sbjct: 888  INITDANNFAPVFENAPYTASVFEDAPVGTTVLVVFATDSDVGVNAQITYLLNDESVNGL 947

Query: 99   ---HKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPN 149
                 F I+P++G I T   L    ++G  Y +TV A D G    S  T VE+SV    N
Sbjct: 948  GSNEPFSINPQTGAIITNAPLDRETMSG--YLLTVTAKDGGNPSLSDTTDVEISVT-DVN 1004

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +P F+   Y   ++E A I ++V  I  + +  G
Sbjct: 1005 DNAPQFKVPLYQATIAEDALIGTSVVQIAATDIDMG 1040



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +++   LDR+      +   V A++    + S    + +++ D+NDNAP+   +P  Q  
Sbjct: 962  IITNAPLDRE--TMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQFK-VPLYQAT 1018

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKL- 116
              E       +V+I ATD D+G+N  I Y++   S+  +    F +DP SGVI T   L 
Sbjct: 1019 IAEDALIGTSVVQIAATDIDMGLNGRIKYTL---SSKDIEDGSFVVDPTSGVIRTNKGLD 1075

Query: 117  ---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
               IA   Y +   A+D G  +  + VEV + +   N   P F  +   + V E + + S
Sbjct: 1076 RESIA--IYHLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTFPSDKITLYVPENSPVGS 1133

Query: 173  TVATI 177
             V  I
Sbjct: 1134 VVGEI 1138



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 19/178 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++ FQVIA +      S   S+ V + D+NDN    P   P   +A  A  
Sbjct: 755 LDRE--ERSRYSFQVIAMDGGIPPKSASTSVVVTIQDVNDND---PTFSPKYYEATIAED 809

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS--GVIETTGKLIAGEQ 121
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++  G+I     L   ++
Sbjct: 810 QPPGTPVTTVTATDPD--EDSRLHYEITAGNTRG--RFSITSQNGRGLITIAQPLDYKQE 865

Query: 122 --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +++T+ ATD+G ++   IV +++    N  +PVF+   Y  +V E A + +TV  +
Sbjct: 866 RRFALTITATDSGQRTDTAIVNINITDA-NNFAPVFENAPYTASVFEDAPVGTTVLVV 922



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+G++ T   L   +    Y   V ATD     +S  T ++V+V+   N  +P F
Sbjct: 411 FKVDSRTGIVTTAASLDRELMDVHY-FRVIATDDSFPPRSGTTTLQVNVLDC-NDHTPSF 468

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   +  ++ EG S+ STV TI
Sbjct: 469 ESEEFLASIREGVSVGSTVITI 490



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 9/151 (5%)

Query: 34  SVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYS 89
           S   ++ V + D NDN P+       +Q+   +   +   I  I+ATD D G NA I Y+
Sbjct: 566 SATATVIVKILDDNDNYPQFSERTYTVQVSEDQWTNENNVITHIQATDADQGNNAAIRYA 625

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
           I  +      +F ID  SG +     L   +   Y + ++A D G  S     ++ V V 
Sbjct: 626 I--IGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVL 683

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  +P F  + +   V E   +   +  +
Sbjct: 684 DANDNAPRFYTSQFQEAVLESVPVGYNIVRV 714


>gi|300798056|ref|NP_001178039.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Rattus
           norvegicus]
 gi|149025694|gb|EDL81937.1| rCG28504 [Rattus norvegicus]
          Length = 2919

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 241 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 293

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 353

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y + V+A+D G   G  S T V    V   N  +P F +  Y V V E  +
Sbjct: 354 PVDREEVESYKLIVEASDQGRDPGPRSSTAVVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 414 PGAPVLRVTAS 424



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 832

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 833 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRA 891

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 892 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 946



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 576 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 634

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 635 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 685

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 686 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DINDNAP + +  P Q    E+      ++ ++A D D G NA + YS+  V +
Sbjct: 491 VTVQVLDINDNAP-IFVSTPFQATVLESVPLGYLVLHVQAIDADAGENARLEYSLAGVGH 549

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I    +L   E   YS  V+A D G  +      VSV +   N  +
Sbjct: 550 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 607

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F Q  Y V ++E A++ ++V T++
Sbjct: 608 PTFTQPEYTVRLNEDAAVGTSVVTVS 633



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 698 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 752

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 753 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 811

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 812 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 845



 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 872  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 929

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 930  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 987

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 988  DRPEYILVIQATSAPLVSRATV 1009



 Score = 37.4 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S   
Sbjct: 387 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 443

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRS 152
             +F +D ++G ++    L     ++Y++ ++A D G     +   +V V V+   N  +
Sbjct: 444 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVL-DINDNA 502

Query: 153 PVFQQNTYDVNVSEGASINSTV 174
           P+F    +   V E   +   V
Sbjct: 503 PIFVSTPFQATVLESVPLGYLV 524


>gi|443704240|gb|ELU01385.1| hypothetical protein CAPTEDRAFT_135638 [Capitella teleta]
          Length = 605

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 19/188 (10%)

Query: 1   YLVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLP---M 55
           YL++  + LDR+  P    +   V+A +  GT   V   +LT+ + D NDNAPR      
Sbjct: 403 YLIILSKPLDREIKP---YYELTVVASD-MGTPPLVSTETLTLYVTDTNDNAPRFSQSTY 458

Query: 56  IPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              IQ  I  G +   ++++EA D D G N+ ITY +     +    F+I+ R+G++ TT
Sbjct: 459 YADIQEIIAPGSS---VIQLEAIDEDYGNNSMITYELLRTPGSHWEWFQINNRTGLV-TT 514

Query: 114 GKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
              +  E  S   + V ATD+G     T V V + +   N   PVF Q+ Y+V++ E A+
Sbjct: 515 RSPVDCEMSSEPRLQVVATDSGTPPLSTTVTVIIHITDVNDNQPVFDQSFYNVSIREDAA 574

Query: 170 INSTVATI 177
           + S +  +
Sbjct: 575 LGSCILQV 582



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 22/196 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPI 59
           L+  K  +DR+    G++ F ++    Q       + + + + D NDN+P  P  +I   
Sbjct: 80  LIKVKSKIDRE--KRGQYEFVMVTEIGQN------IRVIITVEDTNDNSPTFPESVINIT 131

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR---SGV----IET 112
            +++     +     A+D DLG  +   Y I    NTG + FR+  +   +GV    +  
Sbjct: 132 ILESAPRDAKFFIGSASDPDLGEFSTRGYDIV-AGNTG-NAFRLLSKRASNGVLLLDLAI 189

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGAS 169
            G L       YS+T++A D G      ++ V+VV    N  SPVF    Y   V E A+
Sbjct: 190 NGHLDYEVTSSYSLTIEAYDGGDPPRIGVMTVNVVIVDANDNSPVFNFTRYHAQVRENAT 249

Query: 170 INSTVATITVSRLASG 185
           + + V  +  + + SG
Sbjct: 250 VGTKVLQVFATDVDSG 265


>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
          Length = 2682

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 11/185 (5%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           + LDR+     +F F+V AR++     S    + +N+ D+NDN P        +I + EA
Sbjct: 413 KELDREKHE--RFSFRVEARDQGDPVRSANAGVEINIRDVNDNNPIFKPKVYSEIVSEEA 470

Query: 67  R--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR--SGVIETTGKLIAGEQ- 121
                +V + A+D D   ++ +TYSI   S   ++ F I  +   G+I     L   E+ 
Sbjct: 471 MLGSPVVYVTASDADADEHSRVTYSI--TSGNDMNAFNIISQMGQGLITVARPLNFKEKS 528

Query: 122 -YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y +TV A+D G       V ++V    NT  PVFQ+  Y V V E  S+ +T+  +T +
Sbjct: 529 RYILTVTASDPGNLVDTATVFINVSDA-NTYRPVFQETPYTVRVDEDTSVGTTIFQVTAT 587

Query: 181 RLASG 185
            L SG
Sbjct: 588 DLDSG 592



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 12/176 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + + ++LDR+  +      Q+IA +    + S   SL + ++DIND+AP        Q  
Sbjct: 89  LTTTQSLDRE--SIATHHLQIIASDYGHPSQSAYASLIIYVDDINDHAPLFEQ-KSYQRD 145

Query: 63  AGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E+      I+ + A+D D G N EI YSI + S      F IDPR G I T  KL   
Sbjct: 146 VTESSSIGSTIITVRASDEDSGHNGEIEYSILNPSGPN-EVFNIDPRVGSITTNKKLDRE 204

Query: 120 EQ--YSITVQATDTGG--KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
           +   Y++ VQA+D     +    +V+V + V   N   P F Q++Y V+V E   I
Sbjct: 205 KHASYTLQVQASDKAMVIERKTEVVQVQINVLDENDNKPQFSQSSYTVDVREDVDI 260



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 9/168 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  V A++      S   ++ V + D+NDN+PR    +     ++       I++++A 
Sbjct: 318 YRLNVRAQDSGSPHRSNSTTVLVRVIDVNDNSPRFYTSLYQEAVLENVAVGYTIMRVQAY 377

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG- 133
           D+D G+N+ + YSI+   +       ID ++G + T  +L     E++S  V+A D G  
Sbjct: 378 DSDSGLNSALVYSIHDAIDD--LPIEIDTQTGALTTVKELDREKHERFSFRVEARDQGDP 435

Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +S+   VE++ +   N  +P+F+   Y   VSE A + S V  +T S
Sbjct: 436 VRSANAGVEIN-IRDVNDNNPIFKPKVYSEIVSEEAMLGSPVVYVTAS 482



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 6   KENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG 64
           KE LDR+  P+   +   V A +    + +    + + + DINDN P+  + P    +  
Sbjct: 619 KEGLDRELTPS---YTLSVTATDHGRPSKADTTDIEITVADINDNDPKF-LEPKYTGRVD 674

Query: 65  E---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE- 120
           E       I+KI ATD D G+N  + Y+ +    +G   F IDP  GVI T   L   + 
Sbjct: 675 EDAFVGTSILKISATDADSGLNGRVRYT-FEGGFSGDGHFSIDPTLGVIRTAESLDREKV 733

Query: 121 -QYSITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATI 177
             Y +   A D G       V +S+     N  +P FQ +  D+ + E + I S V ++
Sbjct: 734 ASYELRAFAVDRGSPERSVSVVISITLNDINDNAPQFQMSHLDLYIPENSPIGSEVDSV 792



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
           I  I A+D D G    +TYS+    +    + F IDP SG + TT  L    IA     I
Sbjct: 48  IDTITASDPDEGDAGRLTYSLLATRDGRSQNMFTIDPSSGQLTTTQSLDRESIATHHLQI 107

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
              A+D G  S      + + V   N  +P+F+Q +Y  +V+E +SI ST+ T+  S   
Sbjct: 108 I--ASDYGHPSQSAYASLIIYVDDINDHAPLFEQKSYQRDVTESSSIGSTIITVRASDED 165

Query: 184 SG 185
           SG
Sbjct: 166 SG 167



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 12/95 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------ 55
           ++ + E+LDR+      +  +  A ++     SV V +++ LNDINDNAP+  M      
Sbjct: 721 VIRTAESLDRE--KVASYELRAFAVDRGSPERSVSVVISITLNDINDNAPQFQMSHLDLY 778

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           IP    +      ++  + A D D GVNAE+ YSI
Sbjct: 779 IP----ENSPIGSEVDSVLAIDPDEGVNAEVVYSI 809



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I ++ ATD D G NA I+Y++          F ID  +G I     L       Y+++V 
Sbjct: 581 IFQVTATDLDSGDNARISYTMDESE-----MFAIDVETGEIFIKEGLDRELTPSYTLSVT 635

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ATD G   K+  T +E++V    N   P F +  Y   V E A + +++  I+ +   SG
Sbjct: 636 ATDHGRPSKADTTDIEITVA-DINDNDPKFLEPKYTGRVDEDAFVGTSILKISATDADSG 694



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 25/198 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTA--ASVPVSLTVNLNDINDNAPRLP------ 54
           + + + LDR+      +  QV A +K       +  V + +N+ D NDN P+        
Sbjct: 195 ITTNKKLDRE--KHASYTLQVQASDKAMVIERKTEVVQVQINVLDENDNKPQFSQSSYTV 252

Query: 55  -MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIE 111
            +   + I  G     I++++ATD D G N  + YSI   ++ +T    F I+  SG + 
Sbjct: 253 DVREDVDIAGGPV---ILEVKATDADAGDNGLVRYSITGGNIQDT----FYINDISGELS 305

Query: 112 TTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
               L       Y + V+A D+G   +S+ T V V V+   N  SP F  + Y   V E 
Sbjct: 306 LRKPLDYERMNSYRLNVRAQDSGSPHRSNSTTVLVRVI-DVNDNSPRFYTSLYQEAVLEN 364

Query: 168 ASINSTVATITVSRLASG 185
            ++  T+  +      SG
Sbjct: 365 VAVGYTIMRVQAYDSDSG 382


>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
          Length = 4981

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+        + I 
Sbjct: 2945 NINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIK 3004

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             I   D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV A 
Sbjct: 3005 VIAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFCITVTAK 3062

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    SSQ  VE++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3063 DKGNPPLSSQATVEITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3112



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  PR        +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S T + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMTRINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PM----I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   PM    I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPMYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTAIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDITSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINGKNGTISLLGPLDVQAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNVQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFGQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F +DP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVVDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPMYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQA D G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSSAA 390



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAV 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFNINHATGEIRSVRPLDREKVSYYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TI+ S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTISGSSL 2594



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +   + + +K   + S  V + +N+ D NDNAPR   I    + +       + ++  +D
Sbjct: 2739 YVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLGYTVTRVTTSD 2798

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKS 135
             D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I V A D+G   
Sbjct: 2799 EDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSGWTV 2854

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 2855 STDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQV 2894



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSNTGLHKFRIDPRSGVIETTG 114
             R    + K+ A D D G N E+ YS         ++ +S    + ++ D R  ++   G
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFD-RESLMRRRG 1171

Query: 115  KLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  
Sbjct: 1172 TAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANL 1226

Query: 172  STVATITVSRLASG 185
            + V  ++ S +  G
Sbjct: 1227 TQVLRVSASDVDEG 1240



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ + A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKILAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   P F Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENA 596



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
          Length = 4980

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 80/170 (47%), Gaps = 10/170 (5%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V + D+ND  P        ++   E   A   ++ IEA+D D
Sbjct: 550 ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQEAGYEVSVAENAPAGTDLLVIEASDGD 609

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKS 135
           LG N  + +S +  S T    FR+DP SG + T   L   EQ  YS+ V A D G   +S
Sbjct: 610 LGDNGTVRFS-FQESETEQRAFRLDPVSGRLSTISSLDREEQAFYSLLVLAVDLGSPAQS 668

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           S T V VS++   N  SPVF    Y  ++ E     S + T++ S   SG
Sbjct: 669 SLTRVNVSLL-DVNDNSPVFYPVQYFAHIQENEPAGSYITTVSASDPDSG 717



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   S+ +N+ D+NDN+P    +P    P  ++   +   ++++
Sbjct: 3159 KHEMTISATDGGWVARTSYCSIIINVLDVNDNSPVF--VPEEYSPTVLENAPSGTTVMRL 3216

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I YS+   S++ L  F IDP SG+I T G L     + Y +TV+A + 
Sbjct: 3217 NATDADSGSNAVIAYSL-QSSDSDL--FVIDPNSGIITTQGFLDYETKQSYHLTVKAFNV 3273

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V++ + G N   P F    Y   +SE AS  S V  +  S
Sbjct: 3274 PDEERCSFATVNIHLKGTNEYVPRFVSKLYYFEISEAASKGSVVGEVFAS 3323



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVP--VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            F F VIA + QG    +     + V + DINDNAP+    +      +      Q++++ 
Sbjct: 1173 FSFTVIASD-QGLPKPLKDQAVVQVYMKDINDNAPKFLKDLYQATISELAANLTQVLRVS 1231

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G N +I YS+  V       F ID  +G +   G+L   A   YS+ +QA D+G
Sbjct: 1232 ASDVDEGSNGQIHYSV--VKGNEEKMFAIDSATGQVSLAGQLDHEATSSYSLLIQAVDSG 1289

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S  +   +S+ +   N  +P F ++T  V+V E   I   V ++T +   SG
Sbjct: 1290 AVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVTSVTATDSDSG 1343



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGSPSLLSETTVTINIVDSNDNAPQFLNSKYFTPVTKNVRVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            ++K+ A D+ D G N+E+ Y I + S   + KF++D  +G I     L++   + + +TV
Sbjct: 3002 LIKVTAVDDKDFGANSEVEYFISNESP--VEKFKLDSTTGWISVASSLMSNLNQNFMMTV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ VV   N  SP F Q+     V E  S+ S V T++
Sbjct: 3060 TARDKGNPPLSSQATVQI-VVTEENYHSPEFSQSHMSTTVPESQSVGSVVRTVS 3112



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1794 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITISDVNDHIPKFSRPVYSFDI 1848

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAG 119
             +       +  I ATD+D GVN EITY++      G+  F ++P +GV   T  L    
Sbjct: 1849 PEDTTPGSLVAAILATDDDSGVNGEITYTVSEDDEDGI--FFLNPVTGVFNLTRSLDYET 1906

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +QY I     + GG    TI     +   N   PVF   +Y  ++ E   + ST+    V
Sbjct: 1907 QQYYILTAHAEDGGGQFMTIRVYFNILDVNDNPPVFSLTSYSTSLMENLPLGSTILIFNV 1966

Query: 180  SRLASG 185
            +    G
Sbjct: 1967 TDADDG 1972



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   ++A +K   A S    + V + DINDN P     +  ++I      
Sbjct: 2110 LDRE--EVSNYTLTIVATDKGQPALSSSTEVAVIILDINDNNPIFAQALYKVEIDENTLT 2167

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               IV++ A D D G N ++ YS+   +    H+FR+D  +G++     L   ++  YS+
Sbjct: 2168 GTDIVQVYAADGDEGTNGQVRYSLLRGNEN--HEFRMDSVTGILSVAKPLDREKKAAYSL 2225

Query: 125  TVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            TVQ+ D G   +   T VE+ ++   N   PVF+ + Y +NV E
Sbjct: 2226 TVQSVDRGSSPRMDTTTVEI-ILLDINDFVPVFELSPYSINVPE 2268



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  R I+++ A D D G NA +TY+I   ++  
Sbjct: 1726 ITLQDINDNPPVFPTDTLDLTVEENIGDGSR-IMQLTAMDADEGANALVTYAIISGADDS 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             H   IDP SG +  T +L      +YS+ V+A D G +SS   + ++ +   N   P F
Sbjct: 1785 FH---IDPESGELIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHIPKF 1839

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1840 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1869



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +    A S    + V+L D+NDN+P   +  P+Q    IQ 
Sbjct: 644 SLDRE--EQAFYSLLVLAVDLGSPAQSSLTRVNVSLLDVNDNSP---VFYPVQYFAHIQE 698

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E A   I  + A+D D G N  + YSI     +G   F+I   +  I T   L   E+ 
Sbjct: 699 NEPAGSYITTVSASDPDSGPNGTVKYSISAGDTSG---FQIHSHTVAISTRMVLDREEKT 755

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + V ATD G   S  Q IV ++V+   +   PVF Q TY   V E  ++   V +++
Sbjct: 756 AYQLQVVATDGGHLQSPNQAIVTITVLDTQD-NPPVFSQATYSFVVFENVALGYHVGSVS 814

Query: 179 VSRL 182
            S +
Sbjct: 815 ASTM 818



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 9/150 (6%)

Query: 41   VNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + + D+NDNAP  L  +  + + +  +A   I + +A D D GVN  + YS+        
Sbjct: 879  ITVKDLNDNAPHFLQAVEWVNVVENWQAGHSIFQAKALDPDEGVNGMVLYSL---KQNPK 935

Query: 99   HKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
            + F ID ++G I     L +    Y + + A+D G    SS  I+ VS+    N   PVF
Sbjct: 936  NLFTIDEKNGNISLLRPLDVHTGSYQVEILASDRGVPQLSSSFILTVSI-HDVNDNPPVF 994

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             Q +Y+V +SE   +NS    +  S   SG
Sbjct: 995  DQLSYEVTLSEAQPVNSLFFKVQASDQDSG 1024



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R ++ + A 
Sbjct: 2634 KYVVWIEARDTGFPPFSSYEKLAIAVMDVNDNSPIFKEDPFVAEILENLSPRTLLTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ YSI  V+    + F I   +G I++   L   +  QY +TV+A+D G  
Sbjct: 2694 DKDSGPNGQLEYSI--VNGNIENSFSIHHSTGEIKSIRSLDREKVSQYVLTVRASDKGTP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V V + V   N  +P F Q  +   V E A +  TV  +T S
Sbjct: 2752 SQSTTVTVIINVLDENDNAPRFSQ-IFTAPVPENAPLGYTVTRVTTS 2797



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 15/136 (11%)

Query: 39   LTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            +++ L D+NDNAP     +L  +P    +       + K +ATD D G N+ I Y++   
Sbjct: 2035 VSIILLDVNDNAPTFISPKLTYVP----ENTPTDTVVFKAQATDRDSGPNSYIEYTLL-- 2088

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             N   +KF I    G +  TG+L   E   Y++T+ ATD G  +  +  EV+V +   N 
Sbjct: 2089 -NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTIVATDKGQPALSSSTEVAVIILDIND 2147

Query: 151  RSPVFQQNTYDVNVSE 166
             +P+F Q  Y V + E
Sbjct: 2148 NNPIFAQALYKVEIDE 2163



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 30/195 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+     +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREAT--AQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFRSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F +DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVTAADADEGTNADIRYQLQEDGG----PFHMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+T+QA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 YEARRQYSLTLQAHDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRFASVD 368

Query: 166 EGASINSTVATITVS 180
           E A + + VA +TV+
Sbjct: 369 ENAQVGTVVALLTVT 383



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 11/181 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            + S  +LDR+     ++   V A +K   + S  V++ +N+ D NDNAPR   I    + 
Sbjct: 2725 IKSIRSLDRE--KVSQYVLTVRASDKGTPSQSTTVTVIINVLDENDNAPRFSQIFTAPVP 2782

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAG 119
            +       + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L     
Sbjct: 2783 ENAPLGYTVTRVTTSDEDVGVNAISRYSIIDTS----LPFSINPSTGDIIISRPLNREDT 2838

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            ++Y I V A D+G   S  +     V   N  +P F++ +Y ++  E   I + VA ++ 
Sbjct: 2839 DRYRIRVSAHDSGWTVSTDV--AIFVTDVNDNAPRFKKPSYYLDCPELTEIGAKVAQVSA 2896

Query: 180  S 180
            +
Sbjct: 2897 T 2897



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 17/170 (10%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD D+G N  + 
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPE-PSIVVTFKEDSSSGRQVILDTATDADIGSNG-VD 170

Query: 88  YSIYH-VSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSS 136
           +S Y  V      +FR+D     SG      + + G L   A  QY + V+  D G    
Sbjct: 171 HSSYRIVGGNEAGRFRLDITLNPSGEGAFLHLVSKGGLDREATAQYQLLVEVEDKGEPKR 230

Query: 137 QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +  ++V+V V   N   PVF+ + Y   V E A + S+V  +T +    G
Sbjct: 231 RGYLQVNVTVQDINDNPPVFRSSHYQAGVPEDAVVGSSVLQVTAADADEG 280



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 10/167 (5%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A ++     S    LTV+++D+NDN P    +   ++   EA+       K+
Sbjct: 958  GSYQVEILASDRGVPQLSSSFILTVSIHDVNDNPPVFDQL-SYEVTLSEAQPVNSLFFKV 1016

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            +A+D D G N EI YSI    NTG + F I P  G +    +L     ++Y + V A+D 
Sbjct: 1017 QASDQDSGANGEIAYSIVE-GNTG-NAFGIFP-DGQLYVKSELDRELQDRYVLVVVASDR 1073

Query: 132  GGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V V+VV    N   P+F    Y     E     S V  I
Sbjct: 1074 AVEPLSATVNVTVVLEDVNDNRPLFNSTNYVFYFEEEQEGGSFVGMI 1120



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D+NDN P       L   P + I +      +  I A D D G N E+ Y I  
Sbjct: 1513 VTILVTDLNDNVPIFISQNALAADPSVVIGS-----ILTTIVAADPDEGANGEVEYEII- 1566

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +  +  L+  +  YS+ + ATD G +  ++  E++++      
Sbjct: 1567 --NGDTETFMVDRYSGDLRVSSALVPSQLIYSLIISATDLGPERRKSTTEMTIIL-QGLD 1623

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             PVF Q  Y   + EG  I + V +I
Sbjct: 1624 GPVFTQPKYITILKEGEPIGTNVISI 1649



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L++++ D NDN P  P    + +   E  R    +  + ATD+D G NA+I YSI   
Sbjct: 1297 CTLSIDILDENDNTPSFPK-STLFVDVLENMRIGELVTSVTATDSDSGDNADIHYSITGT 1355

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1356 NNHG--TFSISPNTGGIFLAKKLDFETQPLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1413

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       +++E   I S+V ++T
Sbjct: 1414 NPPTFPPGDIFKSITENLPIGSSVISVT 1441



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 26/165 (15%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMI----------PPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P    +          PP    +G        + ATD D G
Sbjct: 452 ARSSVASLVIFVNDINDHPPVFSQLVYRVNLSEEAPPGSYVSG--------VSATDGDSG 503

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  +S   L  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 504 LNANLRYSI--ISGNELDWFHISDHSGLVTTAAAGGLDRERASQVVLNISARDQGVHPKV 561

Query: 138 TIVEVSV-VPGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
           +  ++ V V   N   PVF Q   Y+V+V+E A   + +  I  S
Sbjct: 562 SYAQLVVTVLDVNDEKPVFSQEAGYEVSVAENAPAGTDLLVIEAS 606



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ ++L   N+  PR    +   +I    ++  +V ++ A+D D+G + E+ Y I+  S 
Sbjct: 3283 TVNIHLKGTNEYVPRFVSKLYYFEISEAASKGSVVGEVFASDRDMGTDGEVHYLIFGTSR 3342

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
                 F+I+ R+G I  +G L     E+ S+ V A ++G      + EV+V   +   N 
Sbjct: 3343 K--KGFQINSRTGQIYVSGVLDREKEERISLKVLAKNSGSIRGADVDEVTVNITILDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF    Y+V +SEG  I + V  ++
Sbjct: 3401 -PPVFSLEIYNVQISEGVPIGTHVTFVS 3427



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QA 63
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P       +    + 
Sbjct: 1053 KSELDRELQD--RYVLVVVASDRAVEPLSATVNVTVVLEDVNDNRPLFNSTNYVFYFEEE 1110

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-----------TGLHKFRIDPRSGVIET 112
             E    +  I A D D G N E+ YS  ++             T  H+F    R  ++  
Sbjct: 1111 QEGGSFVGMINAIDKDFGPNGEVRYSFENMQPDFELNAITGEITSTHQFD---RESLMRQ 1167

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV A+D G       Q +V+V  +   N  +P F ++ Y   +SE A+
Sbjct: 1168 RGAAV----FSFTVIASDQGLPKPLKDQAVVQV-YMKDINDNAPKFLKDLYQATISELAA 1222

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1223 NLTQVLRVSASDVDEG 1238



 Score = 39.7 bits (91), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 11/119 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            ++  + A+++     S  +S+ +++ D NDN P     PP  I             ++ +
Sbjct: 1384 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTF---PPGDIFKSITENLPIGSSVISV 1440

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A D D  +N ++TY+I      G H F ID   G I T+ ++       + +TV+A+D
Sbjct: 1441 TAHDPDADINGQLTYAIVQQMPRGSH-FGIDEVKGTIYTSAEIDREFANLFELTVKASD 1498



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 11/141 (7%)

Query: 45   DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDN PR    P     P    +G     +  +  TD D G N+E+ YS+   +     
Sbjct: 2458 DVNDNPPRFQHHPYVTHIPSPTPSGSF---VFSVTVTDPDTGPNSELHYSL---TGRNSE 2511

Query: 100  KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            KF IDP  G I     L    + +  V   D+G         V+V  G     P  +   
Sbjct: 2512 KFHIDPLRGAIMAAELLNIATEMTFFVHVKDSGLSPKMDSTTVTVRFGNKADFPKIRAKQ 2571

Query: 160  YDVNVSEGASINSTVATITVS 180
                  E   I + + TI+ S
Sbjct: 2572 QTFLFPESQPIGTLITTISGS 2592


>gi|340375455|ref|XP_003386250.1| PREDICTED: hypothetical protein LOC100634395 [Amphimedon
            queenslandica]
          Length = 9758

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 13/191 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPP 58
            L+ +  +LD +  N   F F  +A      + +   S+ V++ D ND++P   R      
Sbjct: 1870 LITTSVSLDYETNN--YFEFTAVAYNPGNPSLNDTASVIVSVVDANDHSPVFTRTEYRES 1927

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            I   AG     + ++ ATD+D G NA+I+YSI   ++    +F ID  SG I   G    
Sbjct: 1928 IPETAGVGYTAL-RVNATDDDTGSNADISYSI---ADDDYSQFSIDEDSGTIYGMGSFDY 1983

Query: 119  GEQ---YSITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             E+   Y++T+ ATD G +   T V +SVV    N  +PVF      V + E  +IN TV
Sbjct: 1984 DEEPRVYNLTITATDDGDEPLSTNVTLSVVLSDANDNAPVFPSVFERVLIPENTTINETV 2043

Query: 175  ATITVSRLASG 185
              +T +   SG
Sbjct: 2044 FIVTATDADSG 2054



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 38   SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +LT+ + DINDN P  P  +  +Q+    +    +   +A+D D+G NA ITY +     
Sbjct: 9330 TLTIYVTDINDNPPVCPSSLAALQVLNDTQPNTLLTTYQASDADIGNNALITYEL----- 9384

Query: 96   TGLHK--FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
             G H+  F I+P +G I T  +L++   YS+++ A D G  ++   + + V    +T S 
Sbjct: 9385 -GNHEDSFSINPATGSI-TNDRLLSSRNYSLSIIARDGGNLTAFCSLFIEVYRFYDTVSV 9442

Query: 154  VFQQNTYDVNVSEGASINSTVATITV 179
             F  +  D N +  A + S +  +TV
Sbjct: 9443 TFSGSIDDFNANLFAQLISDLLGVTV 9468



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 38   SLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            SL V + D+NDN P      M PPI  +       I  + ATD D G N+ ITYSI  V 
Sbjct: 6541 SLDVYVLDVNDNDPVFDPVTMPPPIP-EDTPVNTDIFHVHATDEDEGENSTITYSI--VY 6597

Query: 95   NTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG---GKSSQTIVEVSVVPGPN 149
            ++  + F I+P +G +  T  L       Y + ++A D G   G+ +   V V + P  N
Sbjct: 6598 SSPYNVFSINPSTGYVSITTSLNYENSTSYDLIIEARDGGPAPGRYALVNVTVDISP-IN 6656

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P    N     V+E   + +   T TVS
Sbjct: 6657 EHPPSCDPNERLAIVAEDELVGTQFYTFTVS 6687



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 11/175 (6%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQ 69
            D  N   +   VIA +      +  V++TVN+ DI+D AP     +   +  +      Q
Sbjct: 2546 DNENRSIYHLSVIAHDLGDPQLTTTVTVTVNIKDIDDEAPDFTQDLFSGVMTENAGPGVQ 2605

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG----KLIAGEQYSIT 125
            + ++ ATD D      +T+S++      L  F ID ++G++ TT     +   G   +  
Sbjct: 2606 VAQVFATDLDANGTGVVTFSMFD----PLGYFTIDNQTGIVYTTNVPVDRETTGNNITRR 2661

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D  G      V ++VV   N   P   Q TY  N+SE  ++N  +  IT +
Sbjct: 2662 VVAEDVQGLLDTADVLINVV-DENDNPPDLSQETYIFNISENTAVNDLITDITAT 2715



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQ 69
            P  +   + A +      S  V+L+V L+D NDNAP  P      +IP    +       
Sbjct: 1987 PRVYNLTITATDDGDEPLSTNVTLSVVLSDANDNAPVFPSVFERVLIP----ENTTINET 2042

Query: 70   IVKIEATDNDLGVNAEITYSI---YHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQ 121
            +  + ATD D GVNA +TY I   +         + +DP +G +  +  +     I   +
Sbjct: 2043 VFIVTATDADSGVNARLTYRIESSFPSDCNANSTYTLDPLTGRVMLSSPIDVESNIFNLE 2102

Query: 122  YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPV 154
             S+ + ATD G  + S +I  + V+   N   PV
Sbjct: 2103 CSLFITATDGGEPQRSDSISYLVVITDINEHDPV 2136



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----PMIP 57
           +V++   LDR+  +   + F + A + +G  +S  V  TV L D+ND  P +      + 
Sbjct: 189 VVLNSAALDRETKD--TYTFMINATDSEGLQSSANV--TVTLTDVNDQIPVINNTQSELY 244

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI------YHVSNTGLHKFRIDPRSGVIE 111
            I IQ+      +V + A+D D G N+E ++S+      + +S + L+       +G +E
Sbjct: 245 RIIIQSAPNGYSLVNMSASDGDEGANSEYSFSLDDPSLPFSISGSHLYV------NGTLE 298

Query: 112 TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
                   + YS+ V  TD G    SS   V V V P  N  SP F    Y  +  E + 
Sbjct: 299 -------AKTYSVVVIVTDKGMPPLSSNGTVTVQVEPR-NDFSPSFVSTPYTFSFLENS- 349

Query: 170 INSTVATITVSRLASG 185
            N +V T +++   +G
Sbjct: 350 -NGSVFTFSITDGDTG 364



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+ + + D+NDNAP   +L     I   +       V+++ +D+D G+NAEI Y I    
Sbjct: 4732 SVFIQVLDVNDNAPMFEKLNYSDSIVENSTSGTELGVRMQVSDDDSGINAEIRYRI--SD 4789

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
              G   F ID  +G++     L    Q  Y++T+ A D G  S
Sbjct: 4790 GEGKDDFSIDNVTGIVSVFKSLDRERQQSYTLTITAYDLGSPS 4832



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI-VKIEATDNDLG 81
           V+A +      S   ++TVN+ DIN+  P+       +     +   + V + ATD D G
Sbjct: 621 VLASDDGDPRLSTSATITVNVEDINEFPPQFSSANYTKTTLNVSIDTVLVTVSATDAD-G 679

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT------GKLIAGEQYSITVQATDTG--- 132
            +  ITYS     +T L  F I+ ++G I  +      G   A   Y+  V ATD G   
Sbjct: 680 RDNSITYSFAPDGDTAL--FAINEKTGQISLSSSFPALGPTQASLSYTFDVIATDNGQPE 737

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SS   V ++V+   N   P     +Y  ++ E ASI + + T+T +
Sbjct: 738 TMSSNASVTITVITPDNFHDPQLGNTSYTGSLVEKASIGTPILTVTAT 785



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIV-KIEATDND 79
            +V+A + QG   +  V   +N+ D NDN P L     I  I    A   ++  I ATD D
Sbjct: 2661 RVVAEDVQGLLDTADV--LINVVDENDNPPDLSQETYIFNISENTAVNDLITDITATDKD 2718

Query: 80   LGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG----EQYSITVQATDTGGK 134
            LG NA   Y +  V  +G  ++F I   +G ++   KL       + Y+ TV A D   +
Sbjct: 2719 LGNNAITVYDL--VQKSGPTNRFSIISSTGNLKVINKLCFATESLQTYTFTVTAKDNLNE 2776

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            S      V+V V   N+ +P F + +Y   + E A+  +TV
Sbjct: 2777 SLSDTAAVTVLVYEENSHTPSFLRPSYVSRIDELATNGTTV 2817



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 12/135 (8%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            KE LD +     + R   +  +   +  +  V++ V + + NDN+P+   +P +   A  
Sbjct: 2304 KEKLDFET----EMRTYSLIAQATDSVNTATVTVRVRVLESNDNSPQFTNLPNVTTLAES 2359

Query: 66   ARRQIVKIEA--TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----A 118
            A    +   A  TD D  VN +ITYS+    + G   F I+  +GVI   G  +      
Sbjct: 2360 ASNTTIVFTAIATDADTSVNGKITYSLAPSDDFG-DLFIINNETGVIRMAGNNLLDYDMG 2418

Query: 119  GEQYSITVQATDTGG 133
              ++++TV A+D  G
Sbjct: 2419 DREFTLTVIASDRAG 2433



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V ++D ND+ P           A  A    Q +++ A+DND  V++ +TYSI +  +T  
Sbjct: 439 VEVSDANDHPPEFSKSVYYANLAENASTGYQFLRVVASDNDTVVDSSLTYSILNFQST-- 496

Query: 99  HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV 145
             F I+  SG I  +G L       Y++++Q  D+   +    V ++V+
Sbjct: 497 --FSINTTSGWIMVSGTLNRALHPNYTLSLQVNDSSNYTDTAQVIITVI 543



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDNDLGVNAEITYS-IYHVS 94
            +L + + DI+D+ P    +  +  Q +  E   QI+ I A D D   +  ITY+ +  +S
Sbjct: 4838 TLFIAVLDIDDSPPIFVGVSSMYYQTENTEVGSQIITIRAFDADTSNDRPITYTPLVSLS 4897

Query: 95   NTGLHKFRIDPRSGVIETTGKLI----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            ++ L  F I+  +G I T   L     A   +++T Q    G  + QT + +++ V   N
Sbjct: 4898 SSPL-PFFINGTTGAIITNDSLCTTVNATYVFNVTAQDKPGGTLNFQTTMTITLLVYDDN 4956

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVAT 176
            + +P F +  Y   V +G+SI + + T
Sbjct: 4957 SIAPYFDRPEYVFQVRDGSSIGTKLGT 4983



 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 16/156 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            Y++V  E+LDR+  +  K+   + A +   T  S   S+T+ + D+NDN    P+  P Q
Sbjct: 8351 YIMV-NEHLDRE--SVPKYNLIINATDNGTTPRSTTASITIIITDVNDNH---PVFVPSQ 8404

Query: 61   IQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             Q            I  I ATD D+G N+EI Y++        + F I+  +G +  + K
Sbjct: 8405 RQFILEDDLSIGTNITIINATDADIGSNSEIEYTVMENGEPSFY-FDINTVTGQLTVSQK 8463

Query: 116  LIA--GEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
            L+   G   ++ V ATD G    S+ T V ++V+ G
Sbjct: 8464 LVVENGTPRTVKVIATDKGDPSLSNTTDVVITVIEG 8499



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 11/117 (9%)

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            V IEATD DLG+   + YSI     +    F I   + +++    L     + Y+ T+ A
Sbjct: 1423 VGIEATDPDLGI--VLDYSI-----SPQTPFTILENNAILQLNTPLDYETVKNYTFTLYA 1475

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV-ATITVSRLAS 184
            TDT G +    + V+V    N   P+F ++ Y  NV E +SI+  V A+I  S + S
Sbjct: 1476 TDTAGNNGTATLFVTVTDF-NDNPPLFNKSGYAANVLESSSIDIVVIASIFASDIDS 1531


>gi|195344746|ref|XP_002038940.1| GM17110 [Drosophila sechellia]
 gi|194134070|gb|EDW55586.1| GM17110 [Drosophila sechellia]
          Length = 2044

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 377 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 436

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 437 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 496

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 497 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 555

Query: 174 VATITV 179
           + T+TV
Sbjct: 556 ILTVTV 561



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 14/158 (8%)

Query: 12  DPPNPGKFRFQVIAREKQ----GTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAG 64
           DP     FRF++   +K     G +    V+ +   V L DINDN P+      I++   
Sbjct: 607 DPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDR-EHIEVSIY 665

Query: 65  EARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGE 120
           E  +    + + +ATD D G ++++ Y I   +N    +F I  R  V I+        +
Sbjct: 666 EDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRK-RQFAISDRGAVSIQRPLDRETQD 724

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
           ++ I + A D G  +      ++V V   N  +P F Q
Sbjct: 725 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQ 762


>gi|431894693|gb|ELK04489.1| Protocadherin-11 X-linked [Pteropus alecto]
          Length = 1017

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI+Y +     
Sbjct: 452 LLVKIKDENDNAPVFTQ-PFISISVPENNSPGAQLTKISATDADTGRNAEISYLL----- 505

Query: 96  TGLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            G+    +F +D R+G++    KL     E+YS TV A D G     T   V V V   N
Sbjct: 506 -GIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLITNATVLVTVLDQN 564

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SP+F  N Y+  V E    + TV  ITV+
Sbjct: 565 DNSPIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++P      
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF-LVPSSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      I  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPGTVIFTVVAIDNDTGMNAELHYSIVGGNTRGL--FIIDQITGNITMKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + ++A D G   S
Sbjct: 741 IADLGLHRLAIKAKDLGQPDS 761



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 29/197 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           L+V KE LDR+  +   +  +V   +      S    L VN+ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVNVADTNDNRPVFKENEIEVS 257

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIE 111
           +P   PI          + ++ ATD D+G NA+I +   + VSN     F ++  +G+I 
Sbjct: 258 IPENAPIG-------TSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLIT 310

Query: 112 TTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVN 163
               L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V 
Sbjct: 311 IKEPLDREESPNHKLLVLASDGGLMPARAMVIVNVTDINDNVPSIDIRYIINPING-TVV 369

Query: 164 VSEGASINSTVATITVS 180
           +SE A +N+ +A ITV+
Sbjct: 370 LSENAPLNTKIALITVT 386



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP+SGVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDVND----DFTIDPQSGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSHSSTAKVTINVVDVNDNKPVF 673



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYHLIK----GQSI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++V+V 
Sbjct: 185 FGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVNVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + R PVF++N  +V++ E A I ++V  +
Sbjct: 241 DTNDNR-PVFKENEIEVSIPENAPIGTSVTQL 271


>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
          Length = 3478

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 19/186 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           +V +  +LDR+  +   FR  VIA +      S   +L VN+ D ND+ P       +  
Sbjct: 419 IVTTAASLDRELMDVHYFR--VIATDDSFPPRSGTTTLQVNVLDCNDHTPSFESEEFLAS 476

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-------HKFRIDPRSGVIE 111
           I+ +       ++ I ATD D+G NA+I Y+I  ++  G          FRID RSG I 
Sbjct: 477 IR-EGVSVGSTVITIRATDQDIGKNADIEYAILSINGDGSATNGQDEQAFRIDARSGTIS 535

Query: 112 TTGKLI--AGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
           T   L     E Y + V A+D       + S T   +  +   N   P F + TY V VS
Sbjct: 536 TRSALDRETSEMYKLIVSASDMATLQTERRSATATVIVKILDDNDNYPQFSERTYTVQVS 595

Query: 166 EGASIN 171
           E    N
Sbjct: 596 EDQWTN 601



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 9/168 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          +++      IV+++A 
Sbjct: 658 YRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYNIVRVQAY 717

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-- 132
           D+D G N+EI+Y+I    +       +D R+G I TT  L   E  +YS  V A D G  
Sbjct: 718 DSDEGANSEISYNIQDRDDN--LPLAVDSRTGWIHTTKPLDREERSRYSFQVIAMDGGIP 775

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            KS+ T V V+ +   N   P F    Y+  ++E     + V T+T +
Sbjct: 776 PKSASTSVVVT-IQDVNDNDPTFSPKYYEATIAEDQPPGTPVTTVTAT 822



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +N+ D N+ AP     P      +       ++ + ATD+D+GVNA+ITY +   S  GL
Sbjct: 888  INITDANNFAPVFENAPYTASVFEDAPVGTTVLVVFATDSDVGVNAQITYLLNDESVNGL 947

Query: 99   ---HKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPN 149
                 F I+P++G I T   L    ++G  Y +TV A D G    S  T VE+SV    N
Sbjct: 948  GSNEPFSINPQTGAIITNAPLDRETMSG--YLLTVTAKDGGNPSLSDTTDVEISVT-DVN 1004

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +P F+   Y   ++E A I ++V  I  + +  G
Sbjct: 1005 DNAPQFKVPLYQATIAEDALIGTSVVQIAATDIDMG 1040



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +++   LDR+      +   V A++    + S    + +++ D+NDNAP+   +P  Q  
Sbjct: 962  IITNAPLDRE--TMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQFK-VPLYQAT 1018

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKL- 116
              E       +V+I ATD D+G+N  I Y++   S+  +    F +DP SGVI T   L 
Sbjct: 1019 IAEDALIGTSVVQIAATDIDMGLNGRIKYTL---SSKDIEDGSFVVDPTSGVIRTNKGLD 1075

Query: 117  ---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
               IA   Y +   A+D G  +  + VEV + +   N   P F  +   + V E + + S
Sbjct: 1076 RESIA--IYHLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTFPSDKITLYVPENSPVGS 1133

Query: 173  TVATI 177
             V  I
Sbjct: 1134 VVGEI 1138



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 19/178 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++ FQVIA +      S   S+ V + D+NDN    P   P   +A  A  
Sbjct: 755 LDRE--ERSRYSFQVIAMDGGIPPKSASTSVVVTIQDVNDND---PTFSPKYYEATIAED 809

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS--GVIETTGKLIAGEQ 121
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++  G+I     L   ++
Sbjct: 810 QPPGTPVTTVTATDPD--EDSRLHYEITAGNTRG--RFSITSQNGRGLITIAQPLDYKQE 865

Query: 122 --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +++T+ ATD+G ++   IV +++    N  +PVF+   Y  +V E A + +TV  +
Sbjct: 866 RRFALTITATDSGQRTDTAIVNINITDA-NNFAPVFENAPYTASVFEDAPVGTTVLVV 922



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+G++ T   L   +    Y   V ATD     +S  T ++V+V+   N  +P F
Sbjct: 411 FKVDSRTGIVTTAASLDRELMDVHY-FRVIATDDSFPPRSGTTTLQVNVLDC-NDHTPSF 468

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   +  ++ EG S+ STV TI
Sbjct: 469 ESEEFLASIREGVSVGSTVITI 490



 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 9/151 (5%)

Query: 34  SVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYS 89
           S   ++ V + D NDN P+       +Q+   +   +   I  I+ATD D G NA I Y+
Sbjct: 566 SATATVIVKILDDNDNYPQFSERTYTVQVSEDQWTNENNVITHIQATDADQGNNAAIRYA 625

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
           I  +      +F ID  SG +     L   +   Y + ++A D G  S     ++ V V 
Sbjct: 626 I--IGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVL 683

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  +P F  + +   V E   +   +  +
Sbjct: 684 DANDNAPRFYTSQFQEAVLESVPVGYNIVRV 714


>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
          Length = 4981

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+        + I 
Sbjct: 2945 NINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIK 3004

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             I   D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV A 
Sbjct: 3005 VIAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFCITVTAK 3062

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    SSQ  VE++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3063 DKGNPPLSSQATVEITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3112



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PM----I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   PM    I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPMYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTAIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+   SG
Sbjct: 1964 LVFNVTDAXSG 1974



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  PR        +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S T + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMTRINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDITSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIIATDGGNLQSPNQAIVTITVLDTQD-NPPVFGQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVDVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINGKNGTISLLGPLDVQAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F +DP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVVDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPMYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQA D G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSSAA 390



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAV 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFNINHATGEIRSVRPLDREKVSYYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TI+ S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTISGSSL 2594



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +   + + +K   + S  V + +N+ D NDNAPR   I    + +       + ++  +D
Sbjct: 2739 YVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLGYTVTRVTTSD 2798

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKS 135
             D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I V A D+G   
Sbjct: 2799 EDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSGWTV 2854

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 2855 STDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQV 2894



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSNTGLHKFRIDPRSGVIETTG 114
             R    + K+ A D D G N E+ YS         ++ +S    + ++ D R  ++   G
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFD-RESLMRRRG 1171

Query: 115  KLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  
Sbjct: 1172 TAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANL 1226

Query: 172  STVATITVSRLASG 185
            + V  ++ S +  G
Sbjct: 1227 TQVLRVSASDVDEG 1240



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ + A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKILAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   P F Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENA 596



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
          Length = 4588

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       + +A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFC--TINVILTDDNDNAPQF-RATKFEVN 2604

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G        ++K+ A+D D G NA++TY+I   S        I+  SG+I T   L+  
Sbjct: 2605 IGSNVPKGTSVIKVLASDADEGSNADVTYAIEADSENVKENLEINRLSGIITTKESLVGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V V  P  R P F +  Y   VSE   I + +  
Sbjct: 2665 ENEVFTFFVRAVDNGSPPKESVVPVYVKVLPPELRLPRFSEPFYTYTVSEDVPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPICEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            MIP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T+ 
Sbjct: 3031 MIP----EDAFPGKLIMQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTSA 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQATYNLLVKATDGGGRFCQANI-VLTLEDVNDNAPEFSADPYTITVFE 3136



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPERERSSKREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 EGNEHG--KFFIEPKTGVVLSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  ITV
Sbjct: 1351 PSLEPIAFEESFFTFTVMESDPVAHMIGVITV 1382



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ DINDN P           + +     +++++ A   D+  NAEITYSI  +S 
Sbjct: 3215 TVVVSVLDINDNPPVFEYREYGATVSEDVLIGTEVLQVYAASRDIEANAEITYSI--ISG 3272

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                KF ID ++G I     L   +  +Y +TV+ATD G  S   +  V++ V   N  +
Sbjct: 3273 NEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNT 3332

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF Q+TY   +SE A +  +V T+
Sbjct: 3333 PVFSQDTYTAVISEDAVLEQSVITV 3357



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1548 IIVNVSDTNDHAPWFTSSSYEGRVYESAAIGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L   +Q  Y + V+ATD G    S  T V + V    N  S
Sbjct: 1607 G-NSFTIDPILGSIKTAKELDRSKQVEYDLMVKATDKGNPPMSEMTSVRIFVTIADNA-S 1664

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            P F    Y   +SE  SI S V  +T    +S
Sbjct: 1665 PKFTSKEYSFEISETISIGSFVGMVTAHSQSS 1696



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   + A ++     S  V + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTIYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   + ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGF--FSISPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + ++       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 883  LDREEQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKF--IPPNYRVKVREDL 940

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA + DLG ++++ YS+    + G   F +D  SG +    +L   ++  Y
Sbjct: 941  SEGTIIMWLEAYEPDLGQSSQVRYSLL---DAGEGTFEVDKLSGAVRIVQQLDFEKKQVY 997

Query: 123  SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G     SS   VEV V+    N   PVF        V E   I S+V  ++
Sbjct: 998  NLTVRAKDKGKPISLSSTCYVEVEVIDVNENLHPPVFPSFVEKGAVKENVPIGSSVMKVS 1057

Query: 179  VSRLASG 185
                 +G
Sbjct: 1058 AHDEDTG 1064



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 21/160 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q   A            +V++ ATD+D  
Sbjct: 2261 TGAHAEVFVDIVVEDINDN-------PPVFVQQSYAATLSEATVIGTSVVQVRATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D G    SS+
Sbjct: 2314 PNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVRAVDGGMPPLSSE 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             IV V V    N  SP+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VIVTVDVT-DLNDHSPLFDQPVYEAKISEHAAHGHFVTCV 2412



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       ++ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YNLLVKATDGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I+YS+   ++    +F I+  SG+I+    L    Q  Y+++++A D G    
Sbjct: 3153 DAGLNRKISYSLIDSADG---QFSINEVSGIIQLEKPLDRELQAVYTLSLKAVDHGLPRR 3209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTATGTVVVSVL-DINDNPPVFEYREYGATVSEDVLIGTEVLQV 3252



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 24/140 (17%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVN 83
            P+SL+      V + D+N+N    P + P  ++ G  +        ++K+ A D D G +
Sbjct: 1009 PISLSSTCYVEVEVIDVNENLH--PPVFPSFVEKGAVKENVPIGSSVMKVSAHDEDTGRD 1066

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
             EI YSI   S  G+  F+ID  +GVIET+ +L   +   Y +T+ A+D G     + VE
Sbjct: 1067 GEIHYSIRDGSGVGV--FKIDEETGVIETSDRLDRESTSHYWLTIYASDQGVVPLSSFVE 1124

Query: 142  VSVV------PGPNTRSPVF 155
            V +         P T  PV+
Sbjct: 1125 VYIEVEDVNDNAPQTSEPVY 1144



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ +N+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T +L+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SPFTIDPARGEVKVT-RLLDREAVSG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  + V + E   + S+V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDINDNAPVFSKGNHSVIIQENKPVGSSVLQLVVT 3465



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F V+AR   +     ASV VS+ V   D NDN+P L   P     ++   A  ++++I
Sbjct: 2774 YQFSVLARCSHDDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENLPAGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A+D D G N ++ Y++    +   +  F I+  +G I T  +L     ++Y I V A+D
Sbjct: 2832 RASDLDSGTNGQVMYNLDQSQSVEVIESFAINMETGWITTLKELDHEKRDRYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2892 LGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E R     ++ + ATD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHAPQFRSTLPAGIEVKENRPVGSSVIFMNATDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +GV++    L     ++YS+ +  +D G   K++  ++E+ V+   N   P F 
Sbjct: 765 FIIDMETGVLKILSPLDRETTDRYSLNITVSDLGLPQKAAWRLLEIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V VSE   INS +
Sbjct: 824 QESYFVEVSEDKEINSEI 841



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+ND++P     +   +I    A    V  ++A D D     ++ YSI  +S
Sbjct: 2374 VIVTVDVTDLNDHSPLFDQPVYEAKISEHAAHGHFVTCVKAYDADSSDIDKLEYSI--LS 2431

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F +D R+G+I      +      Y++ V  +D   +SS   V V+V+ G N  S
Sbjct: 2432 GNDHKNFVVDGRTGIITLANLRRQALKPSYTLQVSVSDGVFRSSAQ-VRVTVIGG-NLHS 2489

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2490 PVFLQNEYEVELAENAPLHTLVTEVKATDGDSG 2522



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+ T V V +    N  SPVF Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPVYTLTIQGTNMAGLSTNTTVLVHL-QDENDNSPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
            + Y   VSE ASINS V T
Sbjct: 1768 SEYTGLVSESASINSVVLT 1786



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGIPRLFAEYAANVTIHVIDINDCPPVFSKSLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +DP++G +          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLMYSITE-GNIG-EKFSMDPKTGTVTVQNTTHLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 VRASD-GRFASFTSVKINVRESKESQLK-FTQDFYSATVKENSTEAKTLAVIT 2002



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+ +EATD DLG N  + YSI     
Sbjct: 808 LEIRVLDANDNPPEF-LQESYFVEVSEDKEINSEIIPVEATDKDLGPNGHVMYSI----P 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T    F ID  +GV++    L   EQ  + + ++A D   +  Q +  V +   +   N 
Sbjct: 863 TDTDNFSIDSMTGVVKIVNPLDREEQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSEGAS 169
             P F    Y V V E  S
Sbjct: 923 NPPKFIPPNYRVKVREDLS 941



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T+ KL   A  Q+
Sbjct: 1474 EILQISAMDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A+I S V  +T
Sbjct: 1529 VLTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAIGSVVLQVT 1585



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  I ++ ATD D+
Sbjct: 119 IVKAVEKTTNAEARTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADI 178

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E  YS    ++     F I P SG +  TG+L   E   Y + + A D G K
Sbjct: 179 GTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYTEAKLYELEILAVDRGMK 230



 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 19/144 (13%)

Query: 43   LNDINDNAPRLPMIPPIQI-QAGEARRQIVK-IEATDNDLGVNAEITYSI--YHVSNTGL 98
            + D NDNAP    +P   + +   A  QI++ + A D D G N E+ Y +  +H      
Sbjct: 2071 IEDQNDNAPVFVNLPYYAVVKVDTAVGQIIRYVTAIDRDSGRNGEVHYYLKEHH------ 2124

Query: 99   HKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
              F+I   SG I            ++Y ITV A D G    S++ IV ++V+   N   P
Sbjct: 2125 EHFQIG-SSGEISLKKPFEPDTLNKEYLITVVAKDGGSPAFSAEVIVPITVM---NKAMP 2180

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF++  Y   + E   ++S V  +
Sbjct: 2181 VFEKPFYSAEIPENIQVHSPVVHV 2204



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            + +++ATD D G+  ++TY I  +++    +F  + R G I T  KL     A +   I 
Sbjct: 2511 VTEVKATDGDSGIYGQVTYHI--INDFAKDRFYTNER-GQIFTLEKLDRETPAEKVIPIR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              A D GGK +   + V ++   N  +P F+   ++VN+       ++V  +  S    G
Sbjct: 2568 FMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKFEVNIGSNVPKGTSVIKVLASDADEG 2626


>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
          Length = 4590

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 13/147 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDNDLGVNAEITYSIYHV 93
            L V++ DINDN P   +    +  A  +       ++++I A   D+  NAEITYSI  V
Sbjct: 3217 LIVSVLDINDNPP---VFEYREYSASVSEDTVVGTEVLQIHAASRDIEANAEITYSI--V 3271

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S     KF ID  +G I     L   +  +Y +TV+ATD G  S   +V V++ V   N 
Sbjct: 3272 SGNEHGKFSIDSTTGAIFIIDSLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDIND 3331

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +PVF Q+TY   +SE A +  +V T+
Sbjct: 3332 NTPVFSQDTYTAVISEDAVLEQSVITV 3358



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 9/187 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + + E LD +  N  +    V+ R++          + +N++D ND+AP           
Sbjct: 1515 LYTTEKLDHETMN--QHILTVMVRDQDVPVKRNYARVIINVSDTNDHAPWFTSSSYEGRV 1572

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
             ++      ++++ A D D G NAEI YSI    N G + F IDP  G+I+   +L    
Sbjct: 1573 YESAAVGSAVLQVTALDKDKGKNAEIVYSI-ESGNIG-NSFMIDPILGMIKIAKELDHSN 1630

Query: 120  -EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E+Y++ V+ATD G      +  V + V   +  SP F    Y   +SE ASI S V  +
Sbjct: 1631 QEEYNLMVKATDKGDPPMNEVTSVHIFVTVSDNASPKFTAKEYSTEISESASIGSFVGMV 1690

Query: 178  TVSRLAS 184
            T   L+S
Sbjct: 1691 TAYSLSS 1697



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 17/167 (10%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIEATD 77
            + ++ +   G       ++ + L D+NDNAP    + P  I   +  E +  + +++ATD
Sbjct: 3094 YYLLVKATDGGGRFCQANIILTLEDVNDNAPEF-TVDPYSITVFENTEPKTLLTRVQATD 3152

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--- 132
             D G+N +I YS+    N+   +F ID  SG+I     L    Q  Y++T++ATD G   
Sbjct: 3153 ADAGMNRKIHYSLV---NSAEGQFSIDEFSGIIRLEKPLDRELQAVYTLTLRATDEGLPR 3209

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                +S  IV V  +   N   PVF+   Y  +VSE   + + V  I
Sbjct: 3210 RLSSTSNLIVSVLDI---NDNPPVFEYREYSASVSEDTVVGTEVLQI 3253



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+          ++A++  G  A   V+  V L D NDNAP+       + I
Sbjct: 2549 IFTSEKLDRETQAEKVIAISLMAKDSGGKVAFCTVN--VILTDDNDNAPQFRATEYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +   R   ++K+ A+D D G NA+ITY+I   S        ID  SG+I T   LI  E
Sbjct: 2607 GSDVPRGTSVIKVWASDADEGTNADITYTIEAESENVKENLEIDSLSGIITTKESLIGLE 2666

Query: 121  QYSIT--VQATDTGGKSSQTIVEV--SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               +T  V+A D G    +++V V   ++P P    P F +  Y   VSE   + + +  
Sbjct: 2667 NEFLTFFVRAVDGGSPQKESVVPVYARILP-PEVSLPKFSEPFYSYMVSEDIPVGTEIDV 2725

Query: 177  I 177
            I
Sbjct: 2726 I 2726



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 17/166 (10%)

Query: 32   AASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            A S    + V + D NDN P         RLP     + +    R  I ++ A D D G 
Sbjct: 1225 AQSTVARVIVKVLDENDNKPQFLQKFYKIRLPERGKPERERTARREPIYRVIAADKDEGP 1284

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-TVQATDTG--GKSSQTI 139
            NAEI+YSI      G  KF I+P++GV+ ++ K  A  +Y I +++A D G   KSS T 
Sbjct: 1285 NAEISYSIEDGDEHG--KFFIEPKTGVV-SSKKFSAAREYDILSIKAVDNGRPQKSSTTR 1341

Query: 140  VEVSVVPG--PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            + +  +P   P T    F++  +   V E   +   +  I V  L 
Sbjct: 1342 LHIEWIPKPIPPTEPIYFEEEFFSFTVMESDPVAHMIGVIAVEPLG 1387



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + ++LDR+      +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 IIETADHLDRE--TTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++IEA D D   + ++TY I   +  G   F I+P++G+I TT + +  
Sbjct: 1149 VMENSPKDVSVIQIEAFDPDSSSSEKLTYKITSGNPQGF--FSINPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G  +  T+  V V V   N   P F Q  Y + + E
Sbjct: 1207 EQQAEHILEVTVTDNGIPAQSTVARVIVKVLDENDNKPQFLQKFYKIRLPE 1257



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 16/172 (9%)

Query: 6    KENLDRDPPNPGKFRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQ 60
            ++NLD +      ++F V+A+   E     +SV VS+ V   D NDN P L   P     
Sbjct: 2764 EKNLDHE--TTKWYQFSVLAQYTNEDYNVISSVEVSIQVK--DANDNKPVLESNPYEAFI 2819

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI-- 117
            ++   A  ++++++ TD D G+N ++TYS+        +  F I+  +G I T  +L   
Sbjct: 2820 VENMPAGTRVIQVKGTDLDSGLNGQVTYSLDPSQELDIIESFAINMETGWITTLKELDHE 2879

Query: 118  AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              ++Y ITV A D G K   SS  +VEV+V    N   P F    Y   VSE
Sbjct: 2880 MRDKYKITVVAADRGEKIQLSSLAVVEVTVT-DVNDNPPRFTAEIYKGTVSE 2930



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 13/170 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + V  K+ LDR+  +   +   + A +  GT A+  V + V + D NDN+P         
Sbjct: 2977 WKVYVKKPLDREEKD--HYLLNITATD--GTFATRAV-VEVKVLDANDNSPVCEKALYTD 3031

Query: 61   IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                +A   + I+++ ATD D+  NAEITY+++     G  KFR+   +G ++T   L  
Sbjct: 3032 TVPEDALPGKLIMQVSATDADIRSNAEITYTLH---GPGAEKFRLTADTGELKTLMPLDR 3088

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +Q  Y + V+ATD GG+  Q  + +  +   N  +P F  + Y + V E
Sbjct: 3089 EQQAVYYLLVKATDGGGRFCQANI-ILTLEDVNDNAPEFTVDPYSITVFE 3137



 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I++IEATD DLG N E+ YS+     
Sbjct: 809 LDIRILDANDNPPEF-LQDSYFVEVSENKELDSEIIQIEATDKDLGANGEVKYSLL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T   KF I+  +GV++  G L   EQ  Y + ++A D   +  Q     I++VS +   N
Sbjct: 864 TDTDKFAINAVTGVVKVVGLLDHEEQHIYFLKIEARDQPTEEPQLFSTVILKVS-IEDVN 922

Query: 150 TRSPVFQQNTYDVNVSE 166
              P F  + Y V + E
Sbjct: 923 DNPPKFIPSNYHVKIRE 939



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ +N+ DINDN P         + + +A   + ++ + A D D   N  I Y+I    
Sbjct: 3320 VTVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPSNNHIHYTITD-G 3378

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            N G + F IDP  G I+ T KL+  E+   Y++TVQA+D G    +    V++ V   N 
Sbjct: 3379 NQG-NPFTIDPSRGEIKVT-KLLDREKISGYTLTVQASDNGSPPRRNTTTVNIDVSDVND 3436

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PVF +  Y + + E   +  +V  + V+
Sbjct: 3437 NPPVFSKGNYSIIIQENKPVGFSVLQLVVT 3466



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 21/141 (14%)

Query: 47   NDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLHKF 101
            NDNAP    LP    +++ + E    I ++ A D D G N E+ Y +  +H        F
Sbjct: 2076 NDNAPSFVNLPYYAAVKVDS-EVGYVIRRVTAVDKDAGRNGEVHYYLKEHH------EHF 2128

Query: 102  RIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +IDP SG I    K       ++Y +TV A D G    S++ IV ++V+   N   PVF+
Sbjct: 2129 QIDP-SGEISLKKKFEPDTVNKEYLVTVVAKDGGEPAFSAEVIVPITVM---NKAMPVFE 2184

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +  Y   + E   ++S V  +
Sbjct: 2185 KPFYSAEIPENIQLHSPVVHV 2205



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  FRID   G+IET   L       Y +TV 
Sbjct: 1054 VMTVSAYDEDEGRDGEIRYSIRDGSGMGV--FRIDEEKGIIETADHLDRETTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVVPG------PNTRSPVF 155
            ATD G     + +E+ +  G      P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVY 1145



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 7/156 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
            T A   V + + + DINDNAP         +   EA      +V++ ATD D G N  I+
Sbjct: 2262 TGAHADVFVDIIVEDINDNAPVFTE-QSYAVTLSEASVIGTPVVQVSATDADSGTNRGIS 2320

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKS-SQTIVEVSV 144
            Y +          F ID  +G+I TT  L     +Q+ + ++A D G    S   V    
Sbjct: 2321 YHLVEDDTESHDYFHIDSSTGLILTTRALDYEKIQQHKLLIRAVDGGMLPLSSDTVVTVD 2380

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V   N   P+F Q  Y+  +SE A     V  +  S
Sbjct: 2381 VTDLNDNPPLFNQLVYEAKISELAPRGHFVTCVQAS 2416



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPI 59
            +LD +  N   F  QV         A    ++T+ + DIND  P           ++P  
Sbjct: 1835 SLDYEETNIFHFSVQVHDMGIPRLYAEYAANVTIYVVDINDCPPVFSRELYDTSILVPTY 1894

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        +++ + ATD D G+ +++ YSI    N G  KF I+P++G I         
Sbjct: 1895 K------GVKVISVNATDADSGIFSQLIYSIIE-GNIG-EKFTINPKTGDITVQNTTQLR 1946

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +Y +TV+A+D G  +S   V+++V     ++   F Q++Y   V E ++   T+A +T
Sbjct: 1947 SRYELTVRASD-GRFASTASVKINVKESKVSQLK-FTQSSYSAVVQENSTEAKTIAVVT 2003



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI  + K++  E    Y++TVQ T+  G S+   V V +    N   P+F Q
Sbjct: 1711 FAINPNSGVI-VSQKVLDFETLPVYTLTVQGTNMAGLSTNATVLVHL-QDENDNIPIFMQ 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
            + Y   +SE AS+NS V T
Sbjct: 1769 SEYTGLISESASVNSVVLT 1787



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEAT 76
           +   V A EK  T A     + V + D ND  P   P    + +    A R  I ++ AT
Sbjct: 117 YMLTVKAVEKN-TNAETRTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSAT 175

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           D D+G N E  YS    ++     F I P SGV+  TG+L  +  + Y + + A D G K
Sbjct: 176 DADIGTNGEFYYSFKERTDV----FAIHPTSGVVVLTGRLDYLDTKLYEMEILAVDRGLK 231



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 7/100 (7%)

Query: 37   VSLTVNLNDINDNAPR-LPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
            V L V++ D+NDN P+ +P    ++I+       I+  +EA D D+G ++++ YS+    
Sbjct: 912  VILKVSIEDVNDNPPKFIPSNYHVKIREDLPEGTIITWLEAYDPDVGQSSQVRYSLL--- 968

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            ++G   F +D  SG I    +L   ++  Y++TV+A D G
Sbjct: 969  DSGDGTFDVDKLSGAIRIVQRLDYEKKQLYNLTVRAKDKG 1008



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N + P+     P  I+  E +     I+ + ATD D G N ++ Y I   +      
Sbjct: 708 HSLNMHTPQFRSTLPSSIEVREDQPVGSSIILMNATDLDTGFNGKLVYVISGGNEDS--S 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F +D  SG+++    L     ++Y++ V   D G   KS+  ++++ ++   N   P F 
Sbjct: 766 FIVDMESGMLKILSPLDREVKDKYNLNVTVYDLGIPQKSAWHLLDIRILDA-NDNPPEFL 824

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q++Y V VSE   ++S +  I
Sbjct: 825 QDSYFVEVSENKELDSEIIQI 845



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I+++ ATD D     ++ Y++   ++   L KFR+DP +G + TT KL      Q+ +T
Sbjct: 1475 EILQVSATDRD--EKNKLIYTMQGSTDPISLKKFRLDPGTGSLYTTEKLDHETMNQHILT 1532

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      +    V + V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1533 VMVRDQDVPVKRNYARVIINVSDTNDHAPWFTSSSYEGRVYESAAVGSAVLQVT 1586



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)

Query: 46   INDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            +NDN P    ++   +I     R   V  ++A+D D     ++ YSI  ++      F I
Sbjct: 2384 LNDNPPLFNQLVYEAKISELAPRGHFVTCVQASDADRSDADKLEYSI--LTGNDQKNFII 2441

Query: 104  DPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            + ++G+I  +   +      Y + V  +D   +SS   V V+V    N  SPVF QN Y+
Sbjct: 2442 NSKTGIITISNLRRQALKSHYILNVSVSDGVFRSSAQ-VHVTVTSA-NMHSPVFSQNEYE 2499

Query: 162  VNVSEGASINSTVATITVSRLASG 185
            V ++E A +++ V  +      SG
Sbjct: 2500 VELAENAPLHTLVTVVRARDEDSG 2523



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQA 128
            + A D D G    ITY I  +++    +F I  R G I T+ KL    Q     +I++ A
Sbjct: 2515 VRARDEDSGTYGHITYHI--INDFAKDRFYISER-GQIFTSEKLDRETQAEKVIAISLMA 2571

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             D+GGK +   V V ++   N  +P F+   Y+VN+       ++V  +  S    G
Sbjct: 2572 KDSGGKVAFCTVNV-ILTDDNDNAPQFRATEYEVNIGSDVPRGTSVIKVWASDADEG 2627



 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPV 154
             ++F I+  +GVI     L       Y + ++ATD+  G  +   V++ +V   N  +PV
Sbjct: 2225 FNQFMINFNTGVINVVAPLDFESHPAYKLNIRATDSLTGAHADVFVDI-IVEDINDNAPV 2283

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F + +Y V +SE + I + V  ++ +   SG
Sbjct: 2284 FTEQSYAVTLSEASVIGTPVVQVSATDADSG 2314


>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
 gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
          Length = 5086

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A      L +++ND+ND+ P         +  +    
Sbjct: 396 LDRE--EIGKYNLTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 453

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F ID  +G+I T G L     +   +
Sbjct: 454 GSYVASITATDEDTGVNAQVHYEI--LSGNELKWFSIDAATGLIATAGALDREIKDSVEL 511

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ A D G   K + T ++V+V+   N  +P F Q   +V++SE  +  S V T+T +
Sbjct: 512 SISARDGGPNPKFAYTQLKVTVL-DENDEAPQFGQQQLNVSLSEDVAPQSLVCTLTAT 568



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            +V  + LDR+     K ++ V  R   G   +    + + ++D NDN P     +    I
Sbjct: 1779 LVLNDTLDRET----KSKYDVRIRVSDGVQYT-ETYIAIEVSDTNDNPPMFEESVYSFDI 1833

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ ++ A D DLG N++++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1834 PENAPRGYQVGQVVARDADLGQNSQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1891

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D+G  S  T + V   V   N  +P+F   +Y   V E       V T+
Sbjct: 1892 VQHYILIVQAQDSGQPSLSTTITVYCNVLDLNDNAPLFDPMSYSSEVFENVPTGMEVVTV 1951

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 1952 SAKDIDSG 1959



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 20/180 (11%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQ-----IVKI 73
           F V AR+           +TVNL D ND+ P  R    PP    A           +  +
Sbjct: 294 FTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIIRFQYFPPTGSVATVDENAVNGTVVAAV 353

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--QYSITVQAT 129
              D+D G+N E T  I  VS   L  FR++  P   ++   G L   E  +Y++TV A 
Sbjct: 354 SVIDSDDGLNGETTTRI--VSGNELGHFRLEKTPLFHIVRVNGVLDREEIGKYNLTVVAM 411

Query: 130 DTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           D G      ++  I++V+ V   N   PVF+++ Y   +SE A   S VA+IT +   +G
Sbjct: 412 DRGTPARITTAHLIIDVNDV---NDHEPVFEKSEYSAVLSELAPTGSYVASITATDEDTG 468



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            S+ ++L D NDN P+   +  + + +  E    ++++ ++D DLG NA  TYS    +N 
Sbjct: 2805 SVLLHLLDKNDNPPKFTRLFSLNVTENAEIGSFVIRVTSSDLDLGQNANATYSF--SANP 2862

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G  KF+I+P SG I   G L     ++Y + V A+D G   ++T + ++ +   N  +P 
Sbjct: 2863 G-EKFKIEPLSGNITVAGHLDREQEDEYILKVVASD-GAWRAETPITIT-IQDQNDNAPE 2919

Query: 155  FQQNTYDVNVSE 166
            F+ + Y  +  E
Sbjct: 2920 FEHSFYSFSFPE 2931



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT+ + D+NDN P+       +  P +I AGE    +    A D D G NA I YSI 
Sbjct: 2487 VNLTITVGDVNDNEPKFESGSYSIAVPDRIAAGEF---VFGARAVDLDEGDNAVIHYSI- 2542

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
              S      F ++ ++G I T+ +L   ++      YSI +QATD G     +  E+SV+
Sbjct: 2543 --SGRDQEFFEVNFKTGAISTSLELKIRKKSPGDTIYSIVMQATDQGQTQQTSSAELSVM 2600

Query: 146  PGPNTRSPVF 155
              P    P +
Sbjct: 2601 LRPAELFPTY 2610



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 41   VNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
            +N+ D  +N P+      + P+   A   +R IV++ ATD  D+G   E+ Y++ + + +
Sbjct: 3019 INIVDAKNNPPKFEQAAYLSPLPEHARPGQR-IVQVHATDKQDMGAANEMDYALVYGNLS 3077

Query: 97   GLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
                F I    G I     L+      ++ +TV+A D G   +S +T V + VV G N  
Sbjct: 3078 AF--FAIGKHDGWISLAKPLLNVPTNSRFELTVKAIDHGVPPQSDRTRVTI-VVTGENHH 3134

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            +P F   +Y V V E   I ST+ T+
Sbjct: 3135 TPEFTARSYQVIVPENEPIGSTILTV 3160



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 39   LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  ++A D D G N E++Y +   SN 
Sbjct: 2703 VTINVTDANDNAPIMDKLIYNAEVLEEESPPQLIAVVKARDRDSGDNGEVSYRL---SND 2759

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I TT +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2760 YEGTFEI-TDSGEIYTTMRLDREELSDYAFVVEAVDQGVPQLTGTASVLLHLLDKNDNPP 2818

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             F +  + +NV+E A I S V  +T S L  G
Sbjct: 2819 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLG 2849



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 19/191 (9%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDL 80
            Q +A +KQ   +S  V +T+ + D+ND  P         I    A   +V  ++A D D 
Sbjct: 2041 QFLAHQKQQRLSST-VKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDYDE 2099

Query: 81   GVNAEITYSIYHVS-----NTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            G N  I Y +   +     + GL +   F ++P  G++     L       Y + + A D
Sbjct: 2100 GRNGYIDYLLEEAAPDDDASEGLSERLPFSLNPTDGLLRIVDALDRELRSSYVLNITARD 2159

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC--- 186
             G     T  ++ V +   N  SPVF    Y  +V+E ASI + V  ++ + +  G    
Sbjct: 2160 RGEPPQATTTQLLVRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGR 2219

Query: 187  ---AIMNKEEN 194
               +IM  ++N
Sbjct: 2220 IRYSIMTGDQN 2230



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)

Query: 27   EKQGTAASVP-----VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDND 79
            E   T A  P     +SL V++ D+ND+ P           ++  +   +   + ATD D
Sbjct: 948  ELMATDAGTPPLSNRLSLLVHIADVNDHTPVFDHTSYETSLLETTKVNTRFFALAATDID 1007

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N  I+Y I  +       F + P  G +     L   E+  Y++TV   D+G  S  
Sbjct: 1008 LGENGRISYEI--IEGNADRMFGVFP-DGYLFVRAPLDREERDYYALTVSCQDSGDPSRS 1064

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++V V + V   N  +P F  +T+  ++ E A  ++ V  +
Sbjct: 1065 SVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKL 1105



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 38/195 (19%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           + +++ LDR+      +   VIAR++   T  S   ++ +++ DINDN P     P   I
Sbjct: 603 LTTRKTLDRE--TMANYEIFVIARDQGAPTPQSATATVYLSVLDINDNDPEF--YPQHYI 658

Query: 62  --------------QAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
                         QA E          R ++ + ATD D G NA ITY++    + G  
Sbjct: 659 YTFSDVDDIVDGHGQANEKENENGMAKERTLLHVTATDRDEGDNALITYTL---ESGGEG 715

Query: 100 KFRIDPRSGVIETTGKL------IAGEQYSITVQATDTGGKSS--QTIVEVSVVPGPNTR 151
            F++D  SG +   G +           Y + V A D+G + S    +V++ +     T 
Sbjct: 716 VFQVDAHSGAVMLRGDIADRARTATKPHYKLLVSARDSGQRRSGQDAVVDIVLQSKIETE 775

Query: 152 SPVFQQNTYDVNVSE 166
                Q  Y+ ++SE
Sbjct: 776 LECGSQGAYEFHLSE 790



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 23/137 (16%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARRQ--------IVKIEATDNDLGVNAEITYSIYH 92
            V + DINDN P        ++Q+  A  Q        +++  ATD D G+NA++ +++  
Sbjct: 2386 VEVQDINDNGPVF------ELQSYHASIQENLPIGTLVLQPTATDKDAGLNAKLRFNLL- 2438

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG-GKSSQTIVEVSVVPGP 148
                 + +F ID  +GVI TT  ++  E+   Y +T+ A D+   +   + V +++  G 
Sbjct: 2439 --GEHMARFHIDTDTGVI-TTATVLDREETAVYHLTLMAQDSSITEPRASSVNLTITVGD 2495

Query: 149  -NTRSPVFQQNTYDVNV 164
             N   P F+  +Y + V
Sbjct: 2496 VNDNEPKFESGSYSIAV 2512



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 41/199 (20%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            YL V +  LDR+  +   +   V  ++    + S  V + +++ D NDNAP+        
Sbjct: 1034 YLFV-RAPLDREERD--YYALTVSCQDSGDPSRSSVVPVVIHVIDENDNAPQFTNSTFTF 1090

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +   A   + K+ A D D+G NAE+++++    +T    F ID R+G I T  
Sbjct: 1091 SIP----ENAPADTFVGKLLAVDRDIGRNAELSFTL----STQTQDFMIDTRNGFIRTLR 1142

Query: 115  KLIA-----------------------GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                                       G    +    TD G       V+V V V   N 
Sbjct: 1143 PFDREALVKENRNTESSEEERSASRGIGNFLMLEAMVTDNGSPRLHDKVKVKVIVTDVND 1202

Query: 151  RSPVFQQNTYDVNVSEGAS 169
             +P F +  Y V +SEGAS
Sbjct: 1203 NAPEFLRAPYHVTISEGAS 1221



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 15/156 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHV 93
            LT+ L D+NDN    P+    +     A  +     + +  ATD D   NA + YS +  
Sbjct: 3229 LTIILTDVNDNP---PLFNQSEYHGYVAENKPVGTFVFQAHATDKDSPKNAIVHYS-FLP 3284

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT----DTGGKSSQTIVEVSVVPGPN 149
            S T  H F ++  +G I +       E+ +  +Q      D+  +S  T+  V ++ G N
Sbjct: 3285 SGTDRHFFLMNSSNGTISSAATFDYEERRTFALQLKAKNPDSSMESYATLY-VHIL-GVN 3342

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               P F Q  +  +VSE +++ + V  +  +   SG
Sbjct: 3343 EFYPQFLQPVFHFDVSETSAVGTIVGAVQATDKDSG 3378



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 101  FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
            F ID + G++ T  +L   AG   Y + V A   GG  +++ T V+V+V+   N   P F
Sbjct: 1667 FDIDAKLGILSTAAELDREAGPNSYEVEVYAIALGGQPRTAHTKVKVTVL-DKNDSPPQF 1725

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  +  NVSE   I  T+ATI
Sbjct: 1726 LETPFAYNVSEDLEIGHTIATI 1747



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 45/144 (31%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLG--------- 81
           + P+ + + + DINDNAP  P  P I +   E+     +++   ATD D G         
Sbjct: 152 TYPIEVRIKVLDINDNAPEFPE-PSIAVSFSESAVSGTRLLLDAATDADTGENGVTDQYE 210

Query: 82  -VNAEITY--------------SIYHVSNTG--------------LHKFRIDPRSGVIET 112
            VN  + +              S  H+  TG               H+F +DP +GVI T
Sbjct: 211 IVNGNVDHKFRLATTTNPSGDTSYLHLETTGNLDRDKLTYYLAETEHQFTVDPETGVIST 270

Query: 113 TGKLIAGEQYSITVQATDTGGKSS 136
           T ++   +Q   T Q    GG+ S
Sbjct: 271 TERVNCPQQ---TQQNGRGGGQKS 291


>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
 gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
          Length = 4959

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A      L +++ND+ND+ P         +  +    
Sbjct: 468 LDRE--EIGKYNLTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 525

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F ID  +G+I T G L     +   +
Sbjct: 526 GSYVASITATDEDTGVNAQVHYEI--LSGNELKWFSIDAATGLIATAGALDREIKDSVEL 583

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ A D G   K + T ++V+V+   N  +P F Q   +V++SE  +  S V T+T +
Sbjct: 584 SISARDGGPNPKFAYTQLKVTVL-DENDEAPQFGQQQLNVSLSEDVAPQSLVCTLTAT 640



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            +V  + LDR+     K ++ V  R   G   +    + + ++D NDN P     +    I
Sbjct: 1650 LVLNDTLDRET----KSKYDVRIRVSDGVQYT-ETYIAIEVSDTNDNPPMFEESVYSFDI 1704

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ ++ A D DLG N++++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1705 PENAPRGYQVGQVVARDADLGQNSQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1762

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D+G  S  T + V   V   N  +P+F   +Y   V E       V T+
Sbjct: 1763 VQHYILIVQAQDSGQPSLSTTITVYCNVLDLNDNAPLFDPMSYSSEVFENVPTGMEVVTV 1822

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 1823 SAKDIDSG 1830



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 20/180 (11%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQI-----VKI 73
           F V AR+           +TVNL D ND+ P  R    PP    A      +       +
Sbjct: 366 FTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIIRFQYFPPTGSVATVDENAVNGTVVAAV 425

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--QYSITVQAT 129
              D+D G+N E T  I  VS   L  FR++  P   ++   G L   E  +Y++TV A 
Sbjct: 426 SVIDSDDGLNGETTTRI--VSGNELGHFRLEKTPLFHIVRVNGVLDREEIGKYNLTVVAM 483

Query: 130 DTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           D G      ++  I++V+ V   N   PVF+++ Y   +SE A   S VA+IT +   +G
Sbjct: 484 DRGTPARITTAHLIIDVNDV---NDHEPVFEKSEYSAVLSELAPTGSYVASITATDEDTG 540



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            S+ ++L D NDN P+   +  + + +  E    ++++ ++D DLG NA  TYS    +N 
Sbjct: 2676 SVLLHLLDKNDNPPKFTRLFSLNVTENAEIGSFVIRVTSSDLDLGQNANATYSF--SANP 2733

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G  KF+I+P SG I   G L     ++Y + V A+D G   ++T + ++ +   N  +P 
Sbjct: 2734 G-EKFKIEPLSGNITVAGHLDREQEDEYILKVVASD-GAWRAETPITIT-IQDQNDNAPE 2790

Query: 155  FQQNTYDVNVSE 166
            F+ + Y  +  E
Sbjct: 2791 FEHSFYSFSFPE 2802



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT+ + D+NDN P+       +  P +I AGE    +    A D D G NA I YSI 
Sbjct: 2358 VNLTITVGDVNDNEPKFESGSYSIAVPDRIAAGEF---VFGARAVDLDEGDNAVIHYSI- 2413

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
              S      F ++ ++G I T+ +L   ++      YSI +QATD G     +  E+SV+
Sbjct: 2414 --SGRDQEFFEVNFKTGAISTSLELKIRKKSPGDTIYSIVMQATDQGQTQQTSSAELSVM 2471

Query: 146  PGPNTRSPVF 155
              P    P +
Sbjct: 2472 LRPAELFPTY 2481



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           + P+ + + + DINDNAP  P  P I +   E+     +++   ATD D G N       
Sbjct: 152 TYPIEVRIKVLDINDNAPEFPE-PSIAVSFSESAVSGTRLLLDAATDADTGENG--VTDQ 208

Query: 91  YHVSNTGL-HKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTI 139
           Y + N  + HKFR+        D     +ETTG L    +  Y + + A D G       
Sbjct: 209 YEIVNGNVDHKFRLATTTNPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRLGF 268

Query: 140 VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++V+V +   N   P+F  + Y+V+++E A   + V T+  S
Sbjct: 269 LQVNVTILDVNDNPPIFDHSDYNVSLNETAVAGTPVVTVMAS 310



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 13/132 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
           NLDR+  + G ++  + AR+         + + V + D+NDN P         +   E  
Sbjct: 242 NLDRE--SRGSYQLNISARDGGSPPRLGFLQVNVTILDVNDNPPIFDH-SDYNVSLNETA 298

Query: 66  -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI 124
            A   +V + A+DNDLG N+++TY +        H+F +DP +GVI TT ++   +Q   
Sbjct: 299 VAGTPVVTVMASDNDLGDNSKLTYYLAETE----HQFTVDPETGVISTTERVNCPQQ--- 351

Query: 125 TVQATDTGGKSS 136
           T Q    GG+ S
Sbjct: 352 TQQNGRGGGQKS 363



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 13/187 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           + +++ LDR+      +   VIAR++   T  S   ++ +++ DINDN P       I  
Sbjct: 675 LTTRKALDRE--TMANYEIFVIARDQGAPTPQSATATVYLSVLDINDNDPEFYPQHYIYT 732

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--G 119
            + E     V+    D D G+N+ ++Y++ H  +    +FRI P +GV+     + A  G
Sbjct: 733 FSDEIYLSRVR----DRDAGINSRVSYNLTHNPD---QQFRIGPVTGVLYLQRPVRAEPG 785

Query: 120 EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               + + ATD G       + + V +   N  +PVF   +Y+ ++ E   +N+    + 
Sbjct: 786 STLHVELMATDAGTPPLSNRLSLLVHIADVNDHTPVFDHTSYETSLLETTKVNTRFFALA 845

Query: 179 VSRLASG 185
            + +  G
Sbjct: 846 ATDIDLG 852



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 41   VNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
            +N+ D  +N P+      + P+   A   +R IV++ ATD  D+G   E+ Y++ + + +
Sbjct: 2890 INIVDAKNNPPKFEQAAYLSPLPEHARPGQR-IVQVHATDKQDMGAANEMDYALVYGNLS 2948

Query: 97   GLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
                F I    G I     L+      ++ +TV+A D G   +S +T V + VV G N  
Sbjct: 2949 AF--FAIGKHDGWISLAKPLLNVPTNSRFELTVKAIDHGVPPQSDRTRVTI-VVTGENHH 3005

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            +P F   +Y V V E   I ST+ T+
Sbjct: 3006 TPEFTARSYQVIVPENEPIGSTILTV 3031



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 39   LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  ++A D D G N E++Y +   SN 
Sbjct: 2574 VTINVTDANDNAPIMDKLIYNAEVLEEESPPQLIAVVKARDRDSGDNGEVSYRL---SND 2630

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I TT +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2631 YEGTFEI-TDSGEIYTTMRLDREELSDYAFVVEAVDQGVPQLTGTASVLLHLLDKNDNPP 2689

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             F +  + +NV+E A I S V  +T S L  G
Sbjct: 2690 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLG 2720



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 19/191 (9%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDL 80
            Q +A +KQ   +S  V +T+ + D+ND  P         I    A   +V  ++A D D 
Sbjct: 1912 QFLAHQKQQRLSST-VKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDYDE 1970

Query: 81   GVNAEITYSIYHVS-----NTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            G N  I Y +   +     + GL +   F ++P  G++     L       Y + + A D
Sbjct: 1971 GRNGYIDYLLEEAAPDDDASEGLSERLPFSLNPTDGLLRIVDALDRELRSSYVLNITARD 2030

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC--- 186
             G     T  ++ V +   N  SPVF    Y  +V+E ASI + V  ++ + +  G    
Sbjct: 2031 RGEPPQATTTQLLVRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGR 2090

Query: 187  ---AIMNKEEN 194
               +IM  ++N
Sbjct: 2091 IRYSIMTGDQN 2101



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)

Query: 27  EKQGTAASVP-----VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDND 79
           E   T A  P     +SL V++ D+ND+ P           ++  +   +   + ATD D
Sbjct: 791 ELMATDAGTPPLSNRLSLLVHIADVNDHTPVFDHTSYETSLLETTKVNTRFFALAATDID 850

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  I+Y I  +       F + P  G +     L   E+  Y++TV   D+G  S  
Sbjct: 851 LGENGRISYEI--IEGNADRMFGVFP-DGYLFVRAPLDREERDYYALTVSCQDSGDPSRS 907

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V V + V   N  +P F  +T+  ++ E A  ++ V  +
Sbjct: 908 SVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKL 948



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 23/137 (16%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARRQ--------IVKIEATDNDLGVNAEITYSIYH 92
            V + DINDN P        ++Q+  A  Q        +++  ATD D G+NA++ +++  
Sbjct: 2257 VEVQDINDNGPVF------ELQSYHASIQENLPIGTLVLQPTATDKDAGLNAKLRFNLL- 2309

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG-GKSSQTIVEVSVVPGP 148
                 + +F ID  +GVI TT  ++  E+   Y +T+ A D+   +   + V +++  G 
Sbjct: 2310 --GEHMARFHIDTDTGVI-TTATVLDREETAVYHLTLMAQDSSITEPRASSVNLTITVGD 2366

Query: 149  -NTRSPVFQQNTYDVNV 164
             N   P F+  +Y + V
Sbjct: 2367 VNDNEPKFESGSYSIAV 2383



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 41/199 (20%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            YL V +  LDR+  +   +   V  ++    + S  V + +++ D NDNAP+        
Sbjct: 877  YLFV-RAPLDREERD--YYALTVSCQDSGDPSRSSVVPVVIHVIDENDNAPQFTNSTFTF 933

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +   A   + K+ A D D+G NAE+++++    +T    F ID R+G I T  
Sbjct: 934  SIP----ENAPADTFVGKLLAVDRDIGRNAELSFTL----STQTQDFMIDTRNGFIRTLR 985

Query: 115  KLIA-----------------------GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
                                       G    +    TD G       V+V V V   N 
Sbjct: 986  PFDREALVKENRNTESSEEERSASRGIGNFLMLEAMVTDNGSPRLHDKVKVKVIVTDVND 1045

Query: 151  RSPVFQQNTYDVNVSEGAS 169
             +P F +  Y V +SEGAS
Sbjct: 1046 NAPEFLRAPYHVTISEGAS 1064



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)

Query: 45   DINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D NDNAP           ++   +  ++++  A+D+D GVN+++ +SI   +      F 
Sbjct: 1148 DENDNAPEFTQSSSEVSVLETSPSGTELMRFRASDSDQGVNSQVVFSI--SAGNRRDTFH 1205

Query: 103  IDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNT 159
            ID  SG +     L   +   Y++ + A+D G  S S T++   VV   N   P+F    
Sbjct: 1206 IDSVSGSLYLHKALDYEDITSYTLNITASDCGTPSLSTTVLYNVVVVDDNDNPPIFPSTA 1265

Query: 160  YDVNVSEGASINSTVATITVSRLASG 185
                + EG ++ + + T+T     SG
Sbjct: 1266 IVRQIKEGIALKTPIVTVTADDPDSG 1291



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 15/156 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHV 93
            LT+ L D+NDN    P+    +     A  +     + +  ATD D   NA + YS +  
Sbjct: 3100 LTIILTDVNDNP---PLFNQSEYHGYVAENKPVGTFVFQAHATDKDSPKNAIVHYS-FLP 3155

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT----DTGGKSSQTIVEVSVVPGPN 149
            S T  H F ++  +G I +       E+ +  +Q      D+  +S  T+  V ++ G N
Sbjct: 3156 SGTDRHFFLMNSSNGTISSAATFDYEERRTFALQLKAKNPDSSMESYATLY-VHIL-GVN 3213

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               P F Q  +  +VSE +++ + V  +  +   SG
Sbjct: 3214 EFYPQFLQPVFHFDVSETSAVGTIVGAVQATDKDSG 3249



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 101  FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
            F ID + G++ T  +L   AG   Y + V A   GG  +++ T V+V+V+   N   P F
Sbjct: 1538 FDIDAKLGILSTAAELDREAGPNSYEVEVYAIALGGQPRTAHTKVKVTVL-DKNDSPPQF 1596

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  +  NVSE   I  T+ATI
Sbjct: 1597 LETPFAYNVSEDLEIGHTIATI 1618


>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Cavia porcellus]
          Length = 2925

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 784 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 835

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QYS+
Sbjct: 836 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYSL 892

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 893 RAYAVDKGMPPARTSMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 949



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q 
Sbjct: 243 VVTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQ 295

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT 113
           +  E+ R+       ++ + ATD D   NA I Y +   S  G  + F IDPRSGVI T 
Sbjct: 296 EYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGGPSEVFEIDPRSGVIRTR 355

Query: 114 GKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y + V+A+D G   G    T      V   N  +P F +  Y V V E  
Sbjct: 356 GPVDREEVESYKLIVEASDQGRDPGPRGATAAVFLSVEDDNDNAPQFSEKRYIVQVREDV 415

Query: 169 SINSTVATITVS 180
           +  + +  IT S
Sbjct: 416 APGAPILRITAS 427



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 9/146 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DINDNAP   +  P Q    E+      ++ ++A D D G NA + Y +  V +
Sbjct: 494 VTVQVLDINDNAPIF-VSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAGVGH 552

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I    +L   E   YS  V+A D G         VSV +   N  +
Sbjct: 553 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPPLTASASVSVTILDVNDNN 610

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F Q  Y V ++E A++ ++V T++
Sbjct: 611 PTFTQPEYTVRLNEDAAVGTSVVTVS 636



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 734 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 789

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 790 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 848



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+      +   S++V + D+NDN P     P   
Sbjct: 564 WISVAAE-LDREEVD--FYSFGVEARDHGTPPLTASASVSVTILDVNDNNPTFTQ-PEYT 619

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 620 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 670

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 671 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 727

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 728 RPAGTTVVLISAT 740



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 14/161 (8%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEA-RRQIVKIEATDNDLGV 82
            R+     A+  V L+V   D NDNAP+      I Q++   A    I++I A+D D G 
Sbjct: 376 GRDPGPRGATAAVFLSVE--DDNDNAPQFSEKRYIVQVREDVAPGAPILRITASDRDKGS 433

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT-- 138
           NA + YSI  +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +  
Sbjct: 434 NALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNV 490

Query: 139 --IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +V V V+   N  +P+F    +   V E   +   V  +
Sbjct: 491 SGLVTVQVL-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 530


>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
          Length = 4981

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+        + I 
Sbjct: 2945 NINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIK 3004

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             I   D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV A 
Sbjct: 3005 VIAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFCITVTAK 3062

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    SSQ  VE++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3063 DKGNPPLSSQATVEITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3112



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  PR        +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S T + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMTRINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PM----I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   PM    I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPMYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTAIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDITSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINGKNGTISLLGPLDVQAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNVQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFGQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F +DP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVVDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPMYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQA D G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSSAA 390



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAV 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFNINHATGEIRSVRPLDREKVSYYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TI+ S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTISGSSL 2594



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +   + + +K   + S  V + +N+ D NDNAPR   I    + +       + ++  +D
Sbjct: 2739 YVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLGYTVTRVTTSD 2798

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKS 135
             D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I V A D+G   
Sbjct: 2799 EDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSGWTV 2854

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 2855 STDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQV 2894



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSNTGLHKFRIDPRSGVIETTG 114
             R    + K+ A D D G N E+ YS         ++ +S    + ++ D R  ++   G
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFD-RESLMRRRG 1171

Query: 115  KLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  
Sbjct: 1172 TAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANL 1226

Query: 172  STVATITVSRLASG 185
            + V  ++ S +  G
Sbjct: 1227 TQVLRVSASDVDEG 1240



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ + A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKILAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   P F Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENA 596



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500


>gi|301607149|ref|XP_002933171.1| PREDICTED: cadherin-18-like [Xenopus (Silurana) tropicalis]
          Length = 787

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 17/159 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDND---LGVNAEITYSIYHV 93
             + + DINDNAP  P  P I    +  E    ++++ ATD D    G +A + YSI   
Sbjct: 145 FIIKVQDINDNAPEFPDGPYIVTVPEMSEIGTSVIQVTATDGDDPTYGNSARVVYSILQ- 203

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F +DP++GVI T    +   A E Y++ +QA D     GG S  T + V++  
Sbjct: 204 ---GQPYFSVDPKTGVIRTALPNMDREAREHYTVVIQAKDMAGQVGGLSGSTTINVTLT- 259

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N   P F Q  Y + V E A + S V  I  +   +G
Sbjct: 260 DVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTG 298



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 29/191 (15%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPIQ 60
           N+DR+      +   + A++  G    +  S T+N  L D+NDN PR P     +  P  
Sbjct: 223 NMDREARE--HYTVVIQAKDMAGQVGGLSGSTTINVTLTDVNDNPPRFPQKHYQLYVPES 280

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL-- 116
            Q G A   + KI+A D D G+NA+I YSI   +  G+     D   R G++     L  
Sbjct: 281 AQVGSA---VGKIKANDADTGLNADIRYSI--TNGDGVFSISTDKETREGILMLKKPLNY 335

Query: 117 ---------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
                    I G    +  + +  G     T+++V+V  G     P+F    Y++ V E 
Sbjct: 336 EKKKLYTLNIEGANTYLDFRFSHMGPFKDTTMLKVNV--GDVDEPPLFTLPFYEMEVYEN 393

Query: 168 ASINSTVATIT 178
           A   + V T+T
Sbjct: 394 AKAGTVVGTVT 404


>gi|224045771|ref|XP_002195575.1| PREDICTED: cadherin-18-like [Taeniopygia guttata]
          Length = 790

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P   + G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 31/194 (15%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++ Y+I + + +G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMKYTIINGNGSGVFSITTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T+++V V  G     P+F    Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDVTMLKVIV--GDVDEPPLFTMPFYVMEV 392

Query: 165 SEGASINSTVATIT 178
            E A I + V T+T
Sbjct: 393 YENAKIGTPVGTVT 406


>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
 gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
          Length = 2888

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 9/185 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           + ++++LDR+      +   V AR++     S  +S+ V + D+NDNAP +  P    + 
Sbjct: 621 ITTRDSLDRE--TKSDYDLVVEARDQGTPYRSSRISIKVKILDVNDNAPDIVDPQEDVVS 678

Query: 61  IQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
           ++  +    ++V++ A D D G NA ITYSI    ++ G   F IDP SGV+ T   L  
Sbjct: 679 VREEQPIGTEVVRVRAIDRDNGANASITYSILKGRDSDGYGMFSIDPISGVLRTKVSLDH 738

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            E+  Y + V ATD G    QT+  + + V   N   P F  ++    + E   +   + 
Sbjct: 739 EEKTIYRLAVAATDNGKPPRQTVRVLRIEVLDLNDNRPTFTSSSLVFRLREDVGVGHVIG 798

Query: 176 TITVS 180
           +I+ S
Sbjct: 799 SISGS 803



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 23/175 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIP 57
            L+    NLD D    G+ ++ ++ R        VP        +NL D NDN P+ P +P
Sbjct: 2152 LLYINNNLDYDR---GQIQYNLVIRACDSYV--VPKCSIHPFIINLTDENDNEPQFP-VP 2205

Query: 58   PIQIQAGEARR---QIVKIEATDNDLGVNAEITYSI-------YHVSNTGLHKFRIDPRS 107
                  GE       I    ATD D G+   + YSI       Y   + G   F++D  S
Sbjct: 2206 EYLEFVGENEPVGISIFTARATDMDRGMYGNVNYSIENALASGYSAIDDGWKLFKVDSIS 2265

Query: 108  GVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            GVI +       E+  YS T++ATD+GGKS    V++ ++   +  SP F + TY
Sbjct: 2266 GVINSNAVFDYEEKNRYSFTLKATDSGGKSKTVKVKI-LIESRDEFSPQFTERTY 2319



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 20/192 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            ++ +  N DR+      + F V+A +  +  A S  V++ V + D+NDN P     P  +
Sbjct: 1399 VITTAGNFDRE--RQSIYHFMVVATDGGRYNARSQSVAVQVIIADVNDNKPVFDKYP-FK 1455

Query: 61   IQAG---EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             Q G   +  + ++ I ATD D G N EI YS+    N    KFRI+P +G +  T  L 
Sbjct: 1456 EQIGALVQPGQTLLHISATDADQGSNGEIVYSLNDNPNNS--KFRINPSTGALSATQSLA 1513

Query: 118  A--GEQYSITVQATDTGG--KSSQTIVEVSV----VPGPNTRSPVFQQNTYDVNVSEGAS 169
            +  G    I V A D G   + +  ++E+ V       P  R   FQ N+Y VN+ E   
Sbjct: 1514 SENGRLLHIEVTARDKGNPPQVATGLIELRVGDLQQELPALR---FQNNSYKVNLVENTP 1570

Query: 170  INSTVATITVSR 181
            I  TV  +   R
Sbjct: 1571 IGQTVLHLNAVR 1582



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            LDR+     ++  Q+ A+++   T+     ++T+ + D NDN P+  +   I     +A+
Sbjct: 1301 LDREVH--ARYVLQITAQDRGSPTSQQGHCNITIRVEDENDNDPKFELQKYIATVDEDAQ 1358

Query: 68   --RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
                ++ ++A D D+G+NA I YS+ +V+      F ID +SGVI T G      Q  Y 
Sbjct: 1359 LGTTVLTVKAVDADIGINARIVYSLANVTE---WLFDIDSKSGVITTAGNFDRERQSIYH 1415

Query: 124  ITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQ 157
              V ATD G     SQ++    ++   N   PVF +
Sbjct: 1416 FMVVATDGGRYNARSQSVAVQVIIADVNDNKPVFDK 1451



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 38   SLTVNLNDINDNAPR-LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L V + D+ND+AP  LP    P+ +        I  + A+D D G+N EITYSI    N
Sbjct: 1224 TLVVRVTDVNDHAPEFLPGSCYPLAVPENSDLSVIHTVAASDADEGLNGEITYSISG-GN 1282

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQT-IVEVSV-VPGPNT 150
             G +KF ID  +G I  T + +  E   +Y + + A D G  +SQ     +++ V   N 
Sbjct: 1283 IG-NKFSIDINTGAI--TARPLDREVHARYVLQITAQDRGSPTSQQGHCNITIRVEDEND 1339

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
              P F+   Y   V E A + +TV T+
Sbjct: 1340 NDPKFELQKYIATVDEDAQLGTTVLTV 1366



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 12/176 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  K++ +VIA ++     +   ++ VN+ D+NDN P  P  P   I   EA  
Sbjct: 1731 LDREIRD--KYKLKVIATDEGVPQMTGTATINVNIVDVNDNQPTFP--PNSVISVSEATN 1786

Query: 69   -QIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
               V    T ND+  N  +TYS    + +     F ID  SG +     L   E  +Y +
Sbjct: 1787 LGTVLTTITANDVDTNPPLTYSFGDSLDDDAAAYFAIDRYSGKVILIKPLDYEERHEYQL 1846

Query: 125  TVQATDTGGKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             + A+D+   +  T+ V V+ V   N   PVFQQ TY   +++ +  N+ +A I V
Sbjct: 1847 RILASDSAHVARTTLTVRVTDV---NDNPPVFQQITYHAMLNDDSESNTNIAIIAV 1899



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 15/193 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LVV++ +LDR+  +  +   + +         S  V++ + + D+NDN P+ P   PI +
Sbjct: 845  LVVAR-SLDREQQSEYRMEIRALDTSASNNPQSSAVTVKIEIADVNDNPPKWPS-DPINV 902

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               E       +    ATD+D G NAE+ Y++   +      F ID  +G +     L  
Sbjct: 903  YISEDSPVGAIVFNFTATDSDSGTNAELKYNLSKPATPQKEYFSIDSLTGSLTLLAPLDY 962

Query: 119  GE--QYSITVQATDTGGKSSQTIVEVS----VVPGPNTRSPVF---QQNTYDVNVSEGAS 169
             E  ++ + VQATD    +++ +   +    +V   N  SP F   Q     V +S+   
Sbjct: 963  EETKEFLLIVQATDQSSNATERMTTSATARIMVTDVNDNSPSFVVPQAQDTVVYISDSLE 1022

Query: 170  INSTVA-TITVSR 181
            +N  VA T+ + R
Sbjct: 1023 VNQIVAHTVAIDR 1035



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 25/174 (14%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIP-PIQ-IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           S  +++ V + D+NDN P        I+ I++  +  QIV++ A D D G NA +TY I 
Sbjct: 428 STNLTIMVEVQDVNDNPPIFEKTEYSIKVIESTPSNSQIVQVTAVDADTGNNARLTYRIL 487

Query: 92  ----------------HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
                           HV +     F I P SG I    KL     E+Y+ITV  +D G 
Sbjct: 488 GDDQRQRSGKSTSSDEHVPDI----FGIFPNSGWIYLRTKLDRELQERYNITVIVSDNGV 543

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            +      V V V   N  SP+F +  Y+  + E     S +  +T S   +G 
Sbjct: 544 PTLTATTHVIVTVLDANDNSPIFPKQLYEFEIEENMRRGSVIGQVTASDADTGI 597



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 15/170 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-----IVK 72
           + F +IA ++ G + +  V   + L D+NDN P   P    + ++            +V 
Sbjct: 93  YEFPIIATDRGGLSTTAMVK--IQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVV 150

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLIAGEQ--YSITVQA 128
           + ATD+D G    I+Y I   +  G+  FR+D  +G I       L +  Q  + + + A
Sbjct: 151 VVATDSDSGNFGTISYRIVAGNEAGI--FRMDRLTGEIFVARPNMLSSRSQPYHRLNISA 208

Query: 129 TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +D GG  S    EV + V     R P+F +  Y   V E    N+ V T+
Sbjct: 209 SDGGGLRSTHDAEVFISVIDATQRPPIFDKPRYTYYVKEDVKKNTVVGTV 258



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 11/163 (6%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-IVKIEATDNDL 80
            V+AR           S+ V L D NDN+PR         +  G  +   ++K+ A D D 
Sbjct: 1637 VVARTDGSPLLYGYCSIKVELQDENDNSPRFTQQQYSASVWEGNNKGAFVIKVGAFDADQ 1696

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATDTG--GKS 135
            G NA I Y I  V     + F I+P  SG+++T   L     ++Y + V ATD G    +
Sbjct: 1697 GSNAHILYHI--VDGNHDNAFIIEPAFSGIVKTNIVLDREIRDKYKLKVIATDEGVPQMT 1754

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                + V++V   N   P F  N+  ++VSE  ++ + + TIT
Sbjct: 1755 GTATINVNIV-DVNDNQPTFPPNSV-ISVSEATNLGTVLTTIT 1795



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 12/146 (8%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAG 64
           +  LDR+     ++   VI  +      +    + V + D NDN+P  P  +   +I+  
Sbjct: 521 RTKLDRELQE--RYNITVIVSDNGVPTLTATTHVIVTVLDANDNSPIFPKQLYEFEIEEN 578

Query: 65  EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
             R  ++ ++ A+D D G+NA + YS+   +++    F+I+P SG I T   L       
Sbjct: 579 MRRGSVIGQVTASDADTGINAVVRYSLIPSNSS----FQINPVSGEITTRDSLDRETKSD 634

Query: 122 YSITVQATDTGG--KSSQTIVEVSVV 145
           Y + V+A D G   +SS+  ++V ++
Sbjct: 635 YDLVVEARDQGTPYRSSRISIKVKIL 660



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 31/176 (17%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKI 73
            +++ +++A +    A +   +LTV + D+NDN P    I    +   ++       I+ +
Sbjct: 1843 EYQLRILASDSAHVART---TLTVRVTDVNDNPPVFQQITYHAMLNDDSESNTNIAIIAV 1899

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----------AGEQYS 123
             ATD D   NA I Y+I   S          P   + E TG+L           +G  Y 
Sbjct: 1900 NATDVDSEGNAAIRYAISPPS----------PGFAIDELTGQLFVNMSQVNRARSGTLY- 1948

Query: 124  ITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +TV ATD+G    SS T V +  +   +  +P F QN Y ++V+E A   + +  +
Sbjct: 1949 LTVVATDSGRPQLSSSTTVRLE-LKSKSKANPHFIQNQYRLSVNEDAPTGTVITNL 2003



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 39  LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           + +++ D+NDN P        +  P  ++ G     +    A D D G++  ITY + + 
Sbjct: 326 VNIDIEDVNDNPPEFESSTVRISVPENVEIGSP---LYAANAHDKDSGMSGVITYRLSNN 382

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             +    F +D RSG +     L     +++ + V A+D+G     T + + V V   N 
Sbjct: 383 GPSTSSLFAVDSRSGHLSLARPLDYETTQRHMLIVTASDSGIPLLSTNLTIMVEVQDVND 442

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATIT 178
             P+F++  Y + V E    NS +  +T
Sbjct: 443 NPPIFEKTEYSIKVIESTPSNSQIVQVT 470



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
           + ATD D GVNA + Y++       + +F +   +G +    +L    +  Y   + ATD
Sbjct: 43  VSATDPDCGVNAMVNYTLGE-GYKKITEFEVRSSTGEVCIAAELDYETRNSYEFPIIATD 101

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            GG S+  +V++ +    + R P F    Y+V++ E    NS ++T  V  +A+
Sbjct: 102 RGGLSTTAMVKIQLTDVNDNR-PTFYPREYNVSLRESMPTNSLLSTPVVVVVAT 154



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 11/111 (9%)

Query: 29   QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDL--GVN 83
            +G   +  + +T+ + D NDNAP      P ++   E+   +  I  I A D DL    N
Sbjct: 2070 KGMNMTSAIRVTITVEDANDNAPEF-QPGPYEVSISESAAIKYSIAMISAVDADLVNSPN 2128

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDT 131
            +E+ Y I   ++ G+  F ID  +G++     L       QY++ ++A D+
Sbjct: 2129 SEVVYQIISGNDGGM--FSIDLITGLLYINNNLDYDRGQIQYNLVIRACDS 2177


>gi|390459315|ref|XP_003732271.1| PREDICTED: protocadherin alpha-2 [Callithrix jacchus]
          Length = 799

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 9/190 (4%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
           LV+ K +LDR+     +    ++A +      +  V + + + D+NDN P     +  ++
Sbjct: 194 LVLGK-SLDRE--ETAEMNLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFAQSVYKVK 250

Query: 61  IQAGEAR-RQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +    A    +VK+ A+D D G N+EI YS+   VS+T   KF+I P SG I T GKL  
Sbjct: 251 LLENTANGTLVVKLNASDADEGSNSEIVYSLSSDVSSTIQTKFKIYPSSGEIRTKGKLDY 310

Query: 119 GE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            E   Y I V ATD G  S     ++ + +   N  +P     +  + +SE AS+ + +A
Sbjct: 311 EESKSYEIQVTATDRGTPSMSGHCKILLKLVDINDNTPEVSITSLSLPISENASLGTVIA 370

Query: 176 TITVSRLASG 185
            ITVS   SG
Sbjct: 371 LITVSDRDSG 380



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----------ARR 68
            +FQV AR+         V+L V + D NDNAP L + P     AG           A  
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSEVVPWSVGAGH 589

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            + K+ A D D G NA ++Y +   + +    FR+   +G I TT  L
Sbjct: 590 VVAKVRAVDADSGYNAWLSYELQLGTGSVRIPFRVGLYTGEISTTRAL 637


>gi|326679455|ref|XP_003201307.1| PREDICTED: cadherin-7-like, partial [Danio rerio]
          Length = 679

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 69/151 (45%), Gaps = 17/151 (11%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDNAP     P     P     G    Q+   +A D   G NA++ YSI   
Sbjct: 138 FIIKVQDINDNAPEFINEPYVSSIPEMCPTGTTVIQVTATDADDPMFGNNAKLIYSILQ- 196

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F ++P +G+I T+   +   A E Y + VQ  D    +GG S+ T V +S+  
Sbjct: 197 ---GEPYFSVEPTTGIIVTSWSQLDREAKEIYLVVVQVKDMLGLSGGFSATTTVTISLT- 252

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P FQ N Y   VSE A + STV  I
Sbjct: 253 DVNDNGPTFQHNLYTFAVSESAPVGSTVGRI 283



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 21/193 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPI 59
           +V S   LDR+         QV          S   ++T++L D+NDN P     +    
Sbjct: 210 IVTSWSQLDREAKEIYLVVVQVKDMLGLSGGFSATTTVTISLTDVNDNGPTFQHNLYTFA 269

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS--GVIETTGKLI 117
             ++      + +I A D D+GVNA + YS+  +  +       DP +  G+I     L 
Sbjct: 270 VSESAPVGSTVGRIMAEDGDVGVNARMNYSLEDLEESSTFTIHTDPETQEGIIILAQPLD 329

Query: 118 A--GEQYSITVQA----TDT-----GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNV 164
                ++ I V+A    TDT        S +T ++++V  V  P    PVF    Y   V
Sbjct: 330 YENKRRFVIAVEAINENTDTRFLSMDQFSDRTTLKITVTNVDEP----PVFSGTPYIWKV 385

Query: 165 SEGASINSTVATI 177
            E A  ++ V T+
Sbjct: 386 LENAQTSTQVGTV 398


>gi|443732026|gb|ELU16918.1| hypothetical protein CAPTEDRAFT_222008 [Capitella teleta]
          Length = 4878

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 11/168 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEA 75
            +    +A +      S  VS+ V +ND NDN P+  ++    +Q  +  R    I  + A
Sbjct: 2415 YNLVAVATDSGSLPLSSTVSIIVKVNDDNDNVPKF-LLDEYNVQIRDPTRAGWFITGVTA 2473

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGK 134
             D D G +A I YS+      G   F I+  +GVI     L + E  + I V+ATD G +
Sbjct: 2474 LDADAGESARIRYSLL----GGTETFSIEEDTGVILAAEDLTSSEGGHQIYVRATDMGSR 2529

Query: 135  S--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  +   V VS +P   T  PVF        +SE AS+N  V T+  +
Sbjct: 2530 SLSNSVTVSVSFLPTSTTDFPVFTTTQSSFRLSESASVNHVVTTVAAT 2577



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 16/185 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+     K  F++I     G   S    + V + D+ND  P     P       E  
Sbjct: 1781 SLDRE----SKPYFELIIVADDGNQRS-EAKVIVEVTDVNDKTPEFTE-PIYAFDIPENT 1834

Query: 68   R---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
            R   ++ +I ATD D G NAE+TYS+  +++ G  K  + P SGV+   G L   E   Y
Sbjct: 1835 RTGARLGQISATDLDEGSNAELTYSL--ITHWGRDKVSLHPHSGVVTLIGALDYEEVPLY 1892

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +TV+  D+G    SS + V ++V+   N  +P+F  +TY   V E A+I + +  ++ +
Sbjct: 1893 ILTVKVQDSGPISLSSTSTVLINVI-DTNDNAPIFDPSTYSDQVWENATIGTQIMEVSAT 1951

Query: 181  RLASG 185
             + SG
Sbjct: 1952 DVDSG 1956



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 6/164 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +R  ++A +      S    ++V+L D NDN P   M     I +A E  R++  ++A D
Sbjct: 1262 YRLTIMAMDNGEPPLSGTTIVSVSLLDFNDNRPEFVMYENASISEATEVGRELFTVKAID 1321

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
             DLG+N  + YSI    N G   F ID  SG +     L   +Q  Y + +QA D G  +
Sbjct: 1322 EDLGLNGFVEYSIAG-GNVGT-AFHIDSNSGRLSLASPLDYEQQSLYILEIQAHDLGTPA 1379

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              + V   V +   N  +P+F  +     V+E A ++++V  I+
Sbjct: 1380 MVSTVSCWVNIRDENDHAPLFSSSPIVGFVTEDAPVSTSVLLIS 1423



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARR-QIVKIEAT 76
           +  +VIA ++     S   +L + ++D+NDN P   P      +  G      +V++ A+
Sbjct: 641 YTVRVIAVDEGELPLSSTATLFITVDDLNDNPPVFYPSSYYASVLEGIGTGVSVVQVTAS 700

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--K 134
           D D G NA I +S+ H SN+    F I+  +G I+TT  L + ++Y++ V A+D GG   
Sbjct: 701 DADDGNNAVILFSLSHNSNS----FEIERETGWIKTTEALTS-KKYTLAVSASDAGGLPA 755

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNT-YDVNVSE 166
           +   IVE+SVV      +P+F Q   Y  ++SE
Sbjct: 756 AESAIVEISVVR-EQEPAPIFSQPAGYSFSISE 787



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 11/169 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKI 73
            KF+  V A ++     S   S+ V++ +IN NAPR        Q    E+R     I K+
Sbjct: 3040 KFQLTVAASDRGAAPRSSSTSVMVSVLEINRNAPRFTGSDQAYQTSVPESRLIGSTIGKV 3099

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDT 131
             ATDND G N EI+Y+I + ++ GL  F IDP  G I T  +L   + +S+   + A+D 
Sbjct: 3100 TATDNDSGPNGEISYAIANGNDLGL--FVIDPTEGYISTVKELDYEQTHSVQLNITASDH 3157

Query: 132  GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            G +  +T+ +V +  +   N   P F +  Y  +V E +   + V  +T
Sbjct: 3158 GSR-VKTVWKVFIITITDENDNGPQFDEAIYRTSVEENSPRGTVVFVLT 3205



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 10/166 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEAT 76
            +   V AR+      S   +L +++ D NDNAP          +  GE     ++++ A 
Sbjct: 2620 YHLWVEARDNSDPPLSAYHNLILDILDENDNAPVFSQHFFNTSVAEGEYGSLNVLQVTAV 2679

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG- 133
            D D G NA ITY++   +  G+  F ID  SG I T  +L     + Y + V ATD G  
Sbjct: 2680 DADTGDNARITYALEAGNEAGM--FVIDKTSGGIRTQMRLDRETVDAYQLVVTATDHGNP 2737

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++S   VEV  V   N   P+F Q+ ++V + E   + S V  IT
Sbjct: 2738 RQTSTATVEVH-VSDKNDHPPLFSQH-FNVRLPESTPVGSFVLCIT 2781



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 6/145 (4%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +T+N++D+NDNAP    +  + +  G  A   +  + A D D G+N  + Y IY   N  
Sbjct: 1495 VTINVHDLNDNAPDFTSVTAVPVLIGSLANTLVTTVTAVDRDSGMNGRVNYEIY---NGD 1551

Query: 98   LHKFRIDPRSGVIETTGKLIAG-EQYSITVQATDTGGKSSQTIVEVSVVP-GPNTRSPVF 155
               FRI+  +G +     L +    Y +T++A D G        ++++     +   P F
Sbjct: 1552 TDMFRINSDTGDLYLRSNLNSQVLTYDLTIRARDNGPDRKSNFFQLTIFARSSDDNGPSF 1611

Query: 156  QQNTYDVNVSEGASINSTVATITVS 180
             Q +Y   V E     +++  ++ S
Sbjct: 1612 SQTSYSGQVYENVPAGTSIVAVSAS 1636



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 37   VSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + +ND+NDN+P  +LP I     +       +    A D D G N  +TY +   S
Sbjct: 860  VEVNITINDLNDNSPVFQLPAIATTVKENWPVGHDVHLASAVDPDAGSNGRLTYRLMPGS 919

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNT 150
            ++    F ID  +G+I     L  +      + V+A D G    SSQ  V + +    N 
Sbjct: 920  SS---VFVIDEVTGMITVAQPLSQLTDSVVDLFVEAKDGGVPSLSSQQTVHIHI-EDIND 975

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F   +Y+V+VSE   +NS    +T
Sbjct: 976  HTPAFDLKSYEVSVSEAEEVNSRFFDVT 1003



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 23   VIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATD 77
            +    K G   S+    TV+++  DIND+ P   +    ++   EA     +   + A D
Sbjct: 948  LFVEAKDGGVPSLSSQQTVHIHIEDINDHTPAFDL-KSYEVSVSEAEEVNSRFFDVTAVD 1006

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG-- 133
            +D+G+N  +TY I  V      KF I P  G +  T  L   A   Y +T++A D G   
Sbjct: 1007 SDIGLNGHVTYEI--VGGNKERKFGIFP-DGALYITQPLDREAVSLYVLTIRARDMGSPQ 1063

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +SS T V +SV+   N   P F   T+   + E +   ++V T+  S   +G
Sbjct: 1064 RSSLTNVTISVLDN-NDNDPKFSNKTFSFELVENSPRGTSVGTVYASDRDTG 1114



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)

Query: 39   LTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +++ + D NDN PR          ++   A   +VK+ ATD D G NA+I YS+    N 
Sbjct: 2331 ISIRVGDDNDNKPRFEHDQYSAEVMENQAAMTTVVKVTATDRDTGKNADIKYSL---QND 2387

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               +F ID  SG + T   L   E+  Y++   ATD+G     + V + V V   N   P
Sbjct: 2388 ASGRFGIDQSSGEVFTLMSLNREERDVYNLVAVATDSGSLPLSSTVSIIVKVNDDNDNVP 2447

Query: 154  VFQQNTYDVNVSE 166
             F  + Y+V + +
Sbjct: 2448 KFLLDEYNVQIRD 2460



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 23/169 (13%)

Query: 34   SVPVSLT------VNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAE 85
            S P+SL+      +N+ D NDNAP   P     Q+ +      QI+++ ATD D G+N  
Sbjct: 1901 SGPISLSSTSTVLINVIDTNDNAPIFDPSTYSDQVWENATIGTQIMEVSATDVDSGMNGW 1960

Query: 86   ITYSIYHVSNTG---LHKFRIDPRSGVIETTGKLIAGEQ--YSITV----QATDTGGKSS 136
            + YSI     TG    H F +D  +G+I     L    Q  Y++ +    Q+ DT  + S
Sbjct: 1961 VRYSI-----TGGDIDHHFEVDQATGIISVAKALDRETQGHYNLAIEARDQSADTRDQLS 2015

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             T V   ++   N  +P F    +   VSE + I ++V  +  S L  G
Sbjct: 2016 STAVVTVILKDCNDHAPQFLSPGF-FTVSEDSVIGASVYQVITSDLDEG 2063



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 11/176 (6%)

Query: 18   KFRFQ-VIAREKQGT-AASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVK 72
            K R+  V++ E QG    S   ++++++ D+ND  P     P +  +Q    +    + +
Sbjct: 2203 KTRYDLVVSVEDQGDPQLSDRATVSIDIEDVNDCIPLFVDSPFVAYVQENVIQLPLHVAQ 2262

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
            I A D+D G    +TYSI     +    F+I+  +G I     L   E   Y +T+ A D
Sbjct: 2263 ISARDDDTGAYGRVTYSIIEGERS---LFKINSSNGEITALRTLDREEMDHYELTISAMD 2319

Query: 131  TGGKSSQTIVEVSVVPG-PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G         +S+  G  N   P F+ + Y   V E  +  +TV  +T +   +G
Sbjct: 2320 AGSPRLTGTGMISIRVGDDNDNKPRFEHDQYSAEVMENQAAMTTVVKVTATDRDTG 2375



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 29/189 (15%)

Query: 13   PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEAR 67
            P N  +    V  R +    + VP  LT+++   N+N P        M      Q G   
Sbjct: 2932 PENNQRLTVVVFDRGEPPMRSEVP--LTISILPSNENTPLFDEKSYSMSIEENWQVG--- 2986

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSIT 125
            R +  + A+D D+G NAE+TYS+   S  G   F ID  +GVI  +  + +   +++ +T
Sbjct: 2987 RVVGTVTASDADIGANAELTYSV--TSGNGTDYFVIDAETGVISLSASVASKVNKKFQLT 3044

Query: 126  VQATDTGGK-------SSQTIVEVSVVPGPNTRSPVF--QQNTYDVNVSEGASINSTVAT 176
            V A+D G            +++E+      N  +P F      Y  +V E   I ST+  
Sbjct: 3045 VAASDRGAAPRSSSTSVMVSVLEI------NRNAPRFTGSDQAYQTSVPESRLIGSTIGK 3098

Query: 177  ITVSRLASG 185
            +T +   SG
Sbjct: 3099 VTATDNDSG 3107



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 15/156 (9%)

Query: 39  LTVNLNDINDNAP----RLPMIPP---IQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           ++V L D+ND+ P    +   + P   ++  A E    I  +  TD D GVN +   +I 
Sbjct: 333 VSVILVDVNDHDPVVNFKYTSLGPYATVEEGAKEGETVIALVSVTDLDEGVNGQTEATIT 392

Query: 92  HVSNTG---LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSV 144
             +  G   L    + P   +++  GKL   +  +Y+ITVQA D G   ++SQ  + + V
Sbjct: 393 KGNELGHFVLESSAVIPGFNLLKVAGKLDREKVSRYNITVQARDFGNPPRTSQNYL-IIV 451

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           V   N   PVFQ+ +Y     E   + S VA++T +
Sbjct: 452 VNDINDHQPVFQKVSYSKEFREDLPLGSFVASVTAT 487



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 17/150 (11%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVNAEITYSIYH 92
           L + +NDIND+ P    +      + E R        +  + ATDND G+NA ITY I  
Sbjct: 448 LIIVVNDINDHQPVFQKVS----YSKEFREDLPLGSFVASVTATDNDTGINAAITYEI-- 501

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGP 148
            S   L  F I   +G++  T K +  EQ S   +T+ A D    S  +   +S+ +   
Sbjct: 502 TSGNDLGWFEIGSNTGLV-ITAKPLDREQTSRVQLTILARDGAVMSYSSSTTLSITITDV 560

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           N  +P F  +   ++  EG      + T T
Sbjct: 561 NDEAPTFSPSESSLSFPEGTRAGIALMTFT 590



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQ 62
            V + N D D        F VI  +K   A +  ++ TV ++D NDN+P + P      + 
Sbjct: 2086 VIRLNRDLDREMESSVEFVVIVNDKGTPAMTSSLTFTVAIDDANDNSPEVNPQTYSATVD 2145

Query: 63   AG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                   ++++I ATD D+G+NA++ Y++  +S      F +D  +G +    +L    +
Sbjct: 2146 EDIPIGSRLLEIYATDADVGLNADLRYTV--ISGDPNRDFLLDSHTGELSVQKRLDYERK 2203

Query: 122  --YSITVQATDTG 132
              Y + V   D G
Sbjct: 2204 TRYDLVVSVEDQG 2216



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 15/178 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEAT 76
            +   + AR+      S   ++T+++ D NDN P+        ++     R   V  + A+
Sbjct: 1050 YVLTIRARDMGSPQRSSLTNVTISVLDNNDNDPKFSNKTFSFELVENSPRGTSVGTVYAS 1109

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQA 128
            D D G NAE++Y I   S+     F IDPRSG++        E+       +   ++V  
Sbjct: 1110 DRDTGRNAEMSYHIDGESS----GFAIDPRSGMLVATVPFDRESVISEFGSDVVKLSVVV 1165

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             D G    Q    V V +   N   PVF Q+   + + E   + S +AT++ +   SG
Sbjct: 1166 EDGGEPRRQDRSAVDVRIKDLNDNPPVFAQSISQLTLYENTDVGSQIATVSANDADSG 1223



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 11/124 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P     I  + + +  +   QI  + A D D GVNAE+ YSI     
Sbjct: 1178 AVDVRIKDLNDNPPVFAQSISQLTLYENTDVGSQIATVSANDADSGVNAELHYSIL---- 1233

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
             G   F IDP  G I     +     + Y +T+ A D G    S  TIV VS++   + R
Sbjct: 1234 GGDGTFAIDPLLGQISLNKGVDRETHDSYRLTIMAMDNGEPPLSGTTIVSVSLLDFNDNR 1293

Query: 152  SPVF 155
             P F
Sbjct: 1294 -PEF 1296



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 11/173 (6%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVKI-EATD 77
            +  + A +      +V     + + D NDN P+    I    ++    R  +V +  A D
Sbjct: 3149 QLNITASDHGSRVKTVWKVFIITITDENDNGPQFDEAIYRTSVEENSPRGTVVFVLTAHD 3208

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK- 134
             D   N  I YS+    +  L    +D     ++T+  L   + E+  +T++A + G   
Sbjct: 3209 ADDPPNDLIKYSMMG-DDQALTLLSLDGNILSVKTSAGLDYESLEELRVTIEAVNPGESI 3267

Query: 135  --SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               ++ +V++S   G N   PVF QN Y   VSE AS+  T  ++  S L SG
Sbjct: 3268 VGRAEIVVDLS---GVNEYIPVFTQNEYTFTVSESASVGYTFGSVRASDLDSG 3317



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 24/182 (13%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------RLPMIPPIQ 60
            LDR+  +   ++  V A +      +   ++ V+++D ND+ P        RLP   P+ 
Sbjct: 2717 LDRETVD--AYQLVVTATDHGNPRQTSTATVEVHVSDKNDHPPLFSQHFNVRLPESTPVG 2774

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
                     ++ I +TD D+G NA  +Y+    +N    +F ID  SG I     L   +
Sbjct: 2775 -------SFVLCITSTDADIGENAANSYAFISSTNG---QFAIDSASGNITVATPLDRES 2824

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++Y + V A D G  +S+T V + ++   N   P F  N Y  ++  G+ + ++V  ++
Sbjct: 2825 KDEYILDVAAND-GAYNSETSVSIFIL-DVNDNQPQFDMNRYSFSIVGGSPVGTSVGQVS 2882

Query: 179  VS 180
             +
Sbjct: 2883 AT 2884



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 30/139 (21%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----------IAG 119
           I+K+ ATD D+G N +ITYSI  VS+   ++F IDP +G + T   L          +  
Sbjct: 251 ILKVTATDQDIGPNGQITYSI--VSDD-YNQFGIDPLTGEVSTLKPLSCFRSCDPSSLTC 307

Query: 120 EQYS--ITVQATDTG------GKSSQTIVEVSVVPGPNTRSPV--FQQNTYD--VNVSEG 167
           +Q S  ITV+A D G      G++  +++ V V    N   PV  F+  +      V EG
Sbjct: 308 KQKSCLITVEARDNGRPFPLTGRAFVSVILVDV----NDHDPVVNFKYTSLGPYATVEEG 363

Query: 168 ASINSTV-ATITVSRLASG 185
           A    TV A ++V+ L  G
Sbjct: 364 AKEGETVIALVSVTDLDEG 382



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 17/191 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASV-PVSLTVNLNDINDNAPRLPMIPPIQ 60
            L+ + + LDR+      F   V A +K   +      ++ + L D ND+ P+       +
Sbjct: 1671 LISTSQELDRET-GFDVFNLDVYAIDKSSNSPRTNKCTVQITLLDTNDSPPQFTS-DLFE 1728

Query: 61   IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +   E  +Q   +  + A D D      +TYSI   S     KF IDP  GVI   G L 
Sbjct: 1729 LTMSEDSKQGDEVATLVARDADQ--TGSVTYSIREGSE---KKFDIDPLRGVIRVIGSLD 1783

Query: 118  AGEQ--YSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               +  + + + A D   +S ++ IVEV+ V   N ++P F +  Y  ++ E     + +
Sbjct: 1784 RESKPYFELIIVADDGNQRSEAKVIVEVTDV---NDKTPEFTEPIYAFDIPENTRTGARL 1840

Query: 175  ATITVSRLASG 185
              I+ + L  G
Sbjct: 1841 GQISATDLDEG 1851


>gi|350418529|ref|XP_003491887.1| PREDICTED: neural-cadherin-like [Bombus impatiens]
          Length = 3006

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 22/188 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREK-------QGTAASVPVSLTVNLNDINDNAP---RLPMIPP 58
            LDRD     K+   V A +        + T  +    + V + D+NDN P      M  P
Sbjct: 838  LDRD-----KYELNVTALDDGACCPNGETTTHTSTAVVVVFITDVNDNKPVFKECSMYNP 892

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
               +       ++K++ATD D GVN ++ YSI    N    KF +D  +G +  T K+  
Sbjct: 893  KVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGQV-LTNKVFD 951

Query: 118  ----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI +
Sbjct: 952  REGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVENVKQDASIGT 1011

Query: 173  TVATITVS 180
             +  ++ S
Sbjct: 1012 NILRVSAS 1019



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 80/188 (42%), Gaps = 23/188 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 624 LAKELDFEDLRQPHIYSLSVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 681

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+K++ATD D G NAEI Y +          F +D  SG+I    +L
Sbjct: 682 VDEDISLGTS---ILKVKATDADSGANAEIEYLVSD------DHFSVD-SSGIIVNNKQL 731

Query: 117 IAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            A      Y   V A D G         V +     N   P F Q  Y  NV E A  N+
Sbjct: 732 DADNNNAYYEFVVTAKDKGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNT 791

Query: 173 TVATITVS 180
            V T+  S
Sbjct: 792 LVTTVVAS 799



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1502 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYFGNVTENGT 1561

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA++ YSI        TG   F I+  +GVI+T    +  
Sbjct: 1562 AGMVVMTMTAVDYDDPSEGTNAKLIYSIEKNVIEEETGSPIFEIESETGVIKTAVCCLDR 1621

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F +  +  +V+ +EG  +    
Sbjct: 1622 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKEEWFTEVDETEGPDLPEMP 1680

Query: 174  VATITV 179
            + T+TV
Sbjct: 1681 ILTVTV 1686



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 8/184 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ- 60
            V++ +  DR+  + GKF    +    QG  +   V S TV + D+NDN P       ++ 
Sbjct: 944  VLTNKVFDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN 1002

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
              Q       I+++ A+D D   N  ITYS+   +N  GL  F I P SG I    K + 
Sbjct: 1003 VKQDASIGTNILRVSASDEDADNNGAITYSLSSPNNEQGLEYFEIQPESGWI-VLKKPLD 1061

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVAT 176
             E Y +   A D G       VEV + V       PV+    Y  +   E  ++ + V +
Sbjct: 1062 REMYKLEAMAQDKGFPPLSRTVEVQIDVVDRANNPPVWDHIVYGPIYCKENMAVGAKVVS 1121

Query: 177  ITVS 180
            +  S
Sbjct: 1122 VKAS 1125


>gi|194880373|ref|XP_001974422.1| GG21727 [Drosophila erecta]
 gi|190657609|gb|EDV54822.1| GG21727 [Drosophila erecta]
          Length = 2091

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 320 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 379

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 380 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 439

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 440 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 498

Query: 174 VATITV 179
           + T+TV
Sbjct: 499 ILTVTV 504



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 20/159 (12%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
           ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I   +Y +
Sbjct: 234 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI---VYFL 290

Query: 94  SNTGLH-------KFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVE 141
           +  G+        KF I+  +G I     L   +     Q+  TV A D GG+      +
Sbjct: 291 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYAD 350

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           + V +   N  +P F Q  Y  NV+E  +  S+V T++ 
Sbjct: 351 IQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMSA 389


>gi|449281267|gb|EMC88387.1| Cadherin-18 [Columba livia]
          Length = 790

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P   + G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 31/194 (15%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++ Y+I +   +G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMKYTIINGDGSGVFSISTDKDTREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDVTMLKIIV--GDVDEPPLFTMPSYVMEV 392

Query: 165 SEGASINSTVATIT 178
            E A I S V T+T
Sbjct: 393 YENAEIGSAVGTVT 406


>gi|27923751|sp|Q9VJB6.2|CADN2_DROME RecName: Full=Putative neural-cadherin 2; AltName:
           Full=Cadherin-N2; Short=dN2-cadherin; Flags: Precursor
          Length = 2215

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 377 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 436

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 437 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 496

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 497 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 555

Query: 174 VATITV 179
           + T+TV
Sbjct: 556 ILTVTV 561



 Score = 36.6 bits (83), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 14/159 (8%)

Query: 12  DPPNPGKFRFQVIAREKQ----GTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAG 64
           DP     FRF++   +K     G +    V+ +   V L DINDN P+      I++   
Sbjct: 607 DPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDR-EHIEVSIY 665

Query: 65  EARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGE 120
           E  +    + + +ATD D G ++++ Y I   +N    +F I  R  V I+        +
Sbjct: 666 EDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRK-RQFAISDRGAVSIQRPLDRETQD 724

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
           ++ I + A D G  +      ++V V   N  +P F Q+
Sbjct: 725 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD 763


>gi|194758878|ref|XP_001961685.1| GF15088 [Drosophila ananassae]
 gi|190615382|gb|EDV30906.1| GF15088 [Drosophila ananassae]
          Length = 1884

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 292 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 351

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 352 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 411

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE--GASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +   V E  G  I  T 
Sbjct: 412 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWFTEVDETNGTYIPETP 470

Query: 174 VATITV 179
           + T+TV
Sbjct: 471 ILTVTV 476



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 20/158 (12%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
           ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I   +Y +
Sbjct: 206 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI---VYFL 262

Query: 94  SNTGLH-------KFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVE 141
           +  G+        KF I+  +G I     L   +     Q+  TV A D GG+      +
Sbjct: 263 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYAD 322

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + V +   N  +P F Q  Y  NV+E  +  S+V T++
Sbjct: 323 IQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMS 360


>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
 gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
          Length = 1677

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 13/153 (8%)

Query: 41  VNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D+NDN+P          I  +  +    ++++ ATD D G N  ++YSI   ++ G
Sbjct: 413 IDVTDVNDNSPAFTSNAYTANIS-ELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLG 471

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
              F++D +SG++ TT K +  EQ S   IT+ A D G   K+  T V V+++ G N   
Sbjct: 472 W--FQVDFQSGLV-TTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDG-NDNK 527

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           P F +++Y   +SEGASI +TV  ++ + + SG
Sbjct: 528 PRFMKSSYKGTISEGASIGATVLQVSATDVDSG 560



 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 10/170 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
           ++ +K  LDR+  +   + F V+A++         V + + ++DINDNAP   P+     
Sbjct: 588 VLWTKSQLDRETKS--LYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFAS 645

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
           I   E   +++++ ATD D G NA I+Y I   +N G   F ID  +GVI T   L    
Sbjct: 646 IMENEPPGKLLQVTATDADEGTNAVISYDIIGGNNNG--NFSIDSSTGVISTLASLDHEV 703

Query: 119 GEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E +S+ + A D G K  +   +V V+V+   +   PVF    Y+  V E
Sbjct: 704 EEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNL-PVFLYEMYNFTVYE 752



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 41   VNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDNAP     +  I + +       + +I+A D D G NA+  YS+  VS TG+
Sbjct: 1147 VTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSL--VSGTGM 1204

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNTRSPVF 155
             KF I+  +G +  +  L       Y++ V+ATD    +  +  ++ +  G  N + PVF
Sbjct: 1205 DKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVF 1264

Query: 156  QQNTYDVNVSEGASINSTVATITVS 180
             ++ Y VN++E A I S V  +  S
Sbjct: 1265 PESDYTVNITEDALIGSLVINLNAS 1289



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 8/172 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +L+  P     F+  V+A ++     S   S+TV + D NDN+P   + PP    A  + 
Sbjct: 1433 DLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGF-VSPP--AAAAGSS 1489

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITV 126
              ++ I A D D   N ++TYSI   +N     F + P +G ++   ++      Y +T+
Sbjct: 1490 LNVMTITAEDPDRNSNGKVTYSIISGNN---GYFNLHPSTGQLQMIHQIPDNPTIYQLTI 1546

Query: 127  QATDTGGKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA+D G  S QT   VSV   GP    P F    Y  +V+E     ++V T+
Sbjct: 1547 QASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTV 1598



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 16/185 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP- 58
           ++ +K+NLD +  N   + F VIA +    + +   ++T+N+ D NDN+P+L +  +PP 
Sbjct: 264 VIRTKQNLDFEVKN--SYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPH 321

Query: 59  -----IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
                I+ +       I  I  TD D   N++    I +  + G   F+++         
Sbjct: 322 NGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGC--FKVEFLGFYFIQL 379

Query: 114 GKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            K +  E    Y++T+  TD G  S  T+  V + V   N  SP F  N Y  N+SE A 
Sbjct: 380 QKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQ 439

Query: 170 INSTV 174
             S V
Sbjct: 440 NGSYV 444



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEA 75
            +   + A++      S  V++TVN+ D+NDNAP  P   P+ +   E       + +  A
Sbjct: 1335 YELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPT-QPVTLTVRENVNTGFPVGRCTA 1393

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK-----LIAG-EQYSITVQAT 129
            +D D G NA I +S+Y  S T    F ++  +  I T        + AG + + + V AT
Sbjct: 1394 SDRDTGTNAHIAFSMY--SQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMAT 1451

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVF 155
            D G     T   ++V V   N  SP F
Sbjct: 1452 DQGSPKLSTRKSITVQVTDENDNSPGF 1478



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPI-QIQ 62
           K N D D     ++   VIAR   GT   +    TVN+   D NDNAP+      I  I 
Sbjct: 797 KINGDMDREEKAQYLLAVIAR--VGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDID 854

Query: 63  AGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGE 120
                 Q+V    A D D G N  + Y +   SN  GL    I+  SGVI+   KL  G+
Sbjct: 855 GTWLVGQVVYNAAAVDLDAGKNGLVRYQL--TSNAEGL--LWINSTSGVIKLARKLTDGD 910

Query: 121 --QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
             QY++ V A+D+G     + + + +    N   P F  ++Y
Sbjct: 911 ETQYTVQVLASDSGSPPQHSTMTIHITLSIN-HPPKFTLSSY 951



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV + + LDR+          + A++      +   ++TV + D NDN PR  M    + 
Sbjct: 481 LVTTAKPLDRE--QVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRF-MKSSYKG 537

Query: 62  QAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              E       ++++ ATD D G N  ITY I          F ++ ++GV+ T  +L  
Sbjct: 538 TISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDR 597

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             +  YS TV A D G     + V+V + +   N  +PVF    Y  ++ E
Sbjct: 598 ETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIME 648



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 36  PVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHV 93
           P+S+ V ++DINDN PR P +   ++I+          I  ATD D G N  + Y+I   
Sbjct: 78  PISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASG 137

Query: 94  SNTG---LHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VP 146
            NT    L        S +   T K +  E    Y + + ATD G  +      +++ + 
Sbjct: 138 DNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITIL 197

Query: 147 GPNTRSPVFQQNTYDVNVSE 166
             N  +PVF QN+Y  +++E
Sbjct: 198 DENDHAPVFTQNSYLGSIAE 217



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 15/190 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSL-TVNLNDINDNAPRLPMIPPIQI 61
           V++K+ LDR+  +   ++  + A ++ GT A +   L  + + D ND+AP       +  
Sbjct: 158 VITKKPLDRETTD--FYQLNITATDR-GTPALMGYCLINITILDENDHAPVFTQNSYLGS 214

Query: 62  QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            A   +    I+++ A D D G N +I Y+I   +      F +D  +GVI T   L   
Sbjct: 215 IAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFE 274

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQ------QNTYDVNVSEGASI 170
               Y+  V A+D G  S   +  V++ V   N  SP  +       N      SE + I
Sbjct: 275 VKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLI 334

Query: 171 NSTVATITVS 180
           N+ +A I V+
Sbjct: 335 NTNIAYILVT 344



 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 18   KFRFQVIAREK----QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIV 71
            ++  QV+A +     Q +  ++ ++L++N      + P+  +   +   + +     Q  
Sbjct: 913  QYTVQVLASDSGSPPQHSTMTIHITLSIN------HPPKFTLSSYVTHVLASQPLSYQFF 966

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             + A D D G N ++ YSI   +  GL  F I P  G +     L+   +  Y + V+AT
Sbjct: 967  YVVAVDQDSGKNGQLFYSIPQGNEEGL--FGIFP-GGKLYIRKSLLQALKGSYDLIVRAT 1023

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            D G  S    V V++ +   N    +F  NT+   V+E +S  + V T+    L
Sbjct: 1024 DGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHAL 1077


>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2-like [Loxodonta africana]
          Length = 2928

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 833

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY++  
Sbjct: 834 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYTLRA 892

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 893 YAVDKGMPPARTPMEVMVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 947



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V  ++      S   +LT+ + D ND+ P        Q +
Sbjct: 242 VTTAEELDRETKSTHVFR--VTVQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 294

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +         + F IDPRSGVI T G
Sbjct: 295 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGNPSEVFEIDPRSGVIRTRG 354

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 355 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVA 414

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 415 PGAPVLRVTAS 425



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 577 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 635

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 636 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 686

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 687 TASDGTRQDTAQVVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 743



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 699 VVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 753

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 754 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 812

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 813 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 846



 Score = 38.9 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR-RQIVKIEATDNDLGV 82
            R+    +A+  V L+V   D NDNAP+       +Q++   A    ++++ A+D D G 
Sbjct: 374 GRDPGPRSATAAVFLSVE--DDNDNAPQFSEKRYVVQVREDVAPGAPVLRVTASDRDKGS 431

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQ 137
           NA + YSI  +S     +F +D ++G ++    L     ++Y++ V+A D G     +  
Sbjct: 432 NALVHYSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVS 489

Query: 138 TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +V V ++   N  +P+F    +   V E   +   V
Sbjct: 490 GLVTVQIL-DINDNAPIFVSTPFQATVLESVPLGYLV 525



 Score = 36.6 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ + V + D+NDN P          
Sbjct: 873  IVRTLRRLDRE--NVAQYTLRAYAVDKGMPPARTPMEVMVTVLDVNDNPPVFEQDEFDVF 930

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 931  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 988

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 989  DRPEYILVIQATSAPLVSRATV 1010


>gi|340722540|ref|XP_003399662.1| PREDICTED: neural-cadherin-like [Bombus terrestris]
          Length = 3006

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 22/188 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREK-------QGTAASVPVSLTVNLNDINDNAP---RLPMIPP 58
            LDRD     K+   V A +        + T  +    + V + D+NDN P      M  P
Sbjct: 838  LDRD-----KYELNVTALDDGACCPNGETTTHTSTAVVVVFITDVNDNKPVFKECSMYNP 892

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
               +       ++K++ATD D GVN ++ YSI    N    KF +D  +G +  T K+  
Sbjct: 893  KVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGQV-LTNKVFD 951

Query: 118  ----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI +
Sbjct: 952  REGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVENVKQDASIGT 1011

Query: 173  TVATITVS 180
             +  ++ S
Sbjct: 1012 NILRVSAS 1019



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 80/188 (42%), Gaps = 23/188 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 624 LAKELDFEDLRQPHIYSLSVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 681

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+K++ATD D G NAEI Y +          F +D  SG+I    +L
Sbjct: 682 VDEDISLGTS---ILKVKATDADSGANAEIEYLVSD------DHFSVD-SSGIIVNNKQL 731

Query: 117 IAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            A      Y   V A D G         V +     N   P F Q  Y  NV E A  N+
Sbjct: 732 DADNNNAYYEFVVTAKDKGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNT 791

Query: 173 TVATITVS 180
            V T+  S
Sbjct: 792 LVTTVVAS 799



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1502 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYFGNVTENGT 1561

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA++ YSI        TG   F I+  +GVI+T    +  
Sbjct: 1562 AGMVVMTMTAVDYDDPSEGTNAKLIYSIEKNVIEEETGSPIFEIESETGVIKTAVCCLDR 1621

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F +  +  +V+ +EG  +    
Sbjct: 1622 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKEEWFTEVDETEGPDLPEMP 1680

Query: 174  VATITV 179
            + T+TV
Sbjct: 1681 ILTVTV 1686



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 8/184 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ- 60
            V++ +  DR+  + GKF    +    QG  +   V S TV + D+NDN P       ++ 
Sbjct: 944  VLTNKVFDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN 1002

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
              Q       I+++ A+D D   N  ITYS+   +N  GL  F I P SG I    K + 
Sbjct: 1003 VKQDASIGTNILRVSASDEDADNNGAITYSLSSPNNEQGLEYFEIQPESGWI-VLKKPLD 1061

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVAT 176
             E Y +   A D G       VEV + V       PV+    Y  +   E  ++ + V +
Sbjct: 1062 REMYKLEAMAQDKGFPPLSRTVEVQIDVVDRANNPPVWDHIVYGPIYCKENMAVGAKVVS 1121

Query: 177  ITVS 180
            +  S
Sbjct: 1122 VKAS 1125


>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
 gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
          Length = 2716

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 91/197 (46%), Gaps = 26/197 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 420 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSP---TFEAEQF 474

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TG------LHKFRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++ TG      L  FRID RSGV
Sbjct: 475 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIETVTDGTGSTQDQELPIFRIDSRSGV 534

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPNTRSPVFQQNTYDVN 163
           I T   L     + Y + V A+D     S+    T   +  V   N   P F + TY V 
Sbjct: 535 ISTRSSLDRETSDSYHLLVTASDMAAAQSERKTATASVLVKVLDDNDNYPQFSERTYTVQ 594

Query: 164 VSE---GASINSTVATI 177
           V E   G S ++TVA I
Sbjct: 595 VPEDQWGGSEDNTVAHI 611



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 660 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 719

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T  +L   EQ  ++  V A D G  
Sbjct: 720 DSDEGPNAEITYSISERDDN--FPLAVDPRTGWVQTIKQLDREEQSRFAFQVVAKDGGVP 777

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 778 PKSASSSVVITVQDV---NDNDPTFNPKYYEANVGEDQPQGTPVTTVTAT 824



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 12/172 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 869  RFLLTVTATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 926

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+G+NA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 927  TDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 986

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G    S  T VE+SV    N  +PVF+   Y  ++ E A + ++V  ++ S
Sbjct: 987  GGSPSLSDTTDVEISVT-DVNDNAPVFKNPLYQSSILEDALVGTSVIQVSAS 1037



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 19/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V + + LDR+     +F FQV+A++      S   S+ + + D+NDN    P   P   
Sbjct: 750 WVQTIKQLDRE--EQSRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PTFNPKYY 804

Query: 62  QA--GEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIET 112
           +A  GE + Q   +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  
Sbjct: 805 EANVGEDQPQGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQ 860

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
           +      +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +
Sbjct: 861 SLDYKQEKRFLLTVTATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGT 919

Query: 173 TVATITVS 180
           TV  ++ +
Sbjct: 920 TVLVVSAT 927



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + +++ D+NDNAP    P+     
Sbjct: 964  IVTNAPLDRE--TTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSI 1021

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            ++       ++++ A+D D+G+N  I Y +    +     F IDP SG + T   L   +
Sbjct: 1022 LEDALVGTSVIQVSASDPDIGLNGRIKY-LLSDRDVEDGSFVIDPTSGTVRTNKGLDRES 1080

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +T  A D G     + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1081 VAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEI 1140



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 412 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 469

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 470 EAEQFEASIREGATVGSTVITL 491



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 534 VISTRSSLDRETSD--SYHLLVTASDMAAAQSERKTATASVLVKVLDDNDNYPQFSERTY 591

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 592 TVQVPEDQ-WGGSEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 648

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 649 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 705


>gi|332237932|ref|XP_003268160.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Nomascus leucogenys]
          Length = 2871

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 788 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 839

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 840 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 898

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 899 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 953



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 248 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 300

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 301 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 360

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +      V E  +
Sbjct: 361 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKXXXXQVREDVT 420

Query: 170 INSTVATITVS 180
               V  +T S
Sbjct: 421 PGXPVLRVTAS 431



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 26/180 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+    A +   S++V + D+NDN P     P   ++  E       +V + A
Sbjct: 583 YSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 641

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
            D D   ++ ITY I   S    ++F I  +SG     G L++           QY + V
Sbjct: 642 VDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 692

Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E     +TV  I+ +   +G
Sbjct: 693 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 749



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + VN+ D N + P         +   E R     +V I ATD D G NA ITY +     
Sbjct: 705 IVVNVTDANTHRPVFQS-SHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM----E 759

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
             + +FRID  +G + T  +L   +Q  Y++ + A D G   KS  T +E+ +V   N  
Sbjct: 760 DSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 818

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 819 APQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 852



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 18/152 (11%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI------VKIEATDNDLGVNAEIT 87
           S   ++ +++ D NDNAP+       +    + R  +      +++ A+D D G NA + 
Sbjct: 387 STTAAVFLSVEDDNDNAPQFSE----KXXXXQVREDVTPGXPVLRVTASDRDKGSNALVH 442

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEV 142
           YSI  +S     +F +D ++G ++    L     ++Y++ V+A D G     +   +V V
Sbjct: 443 YSI--MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTV 500

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V+   N  +P+F    +   V E   +   V
Sbjct: 501 QVL-DINDNAPIFVSTPFQATVLESVPLGYLV 531



 Score = 38.1 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 879  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 936

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 937  VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 994

Query: 120  E--QYSITVQATDTGGKSSQTI 139
            +  +Y + +QAT     S  T+
Sbjct: 995  DRPEYILVIQATSAPLVSRATV 1016


>gi|410896278|ref|XP_003961626.1| PREDICTED: protocadherin-15-like [Takifugu rubripes]
          Length = 1746

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 21/177 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-----IQIQA 63
           LDR+  +   + F ++A +  G   S+PV +T+ + D NDN P    +         I  
Sbjct: 445 LDREAQD--SYTFTLLASD--GVQQSIPVPVTITVLDANDNTPTFANVSYSVNLFTDITP 500

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQ 121
           GEA   ++++ A D+D G N ++ + I    + G   F I   +GVI      +L  G  
Sbjct: 501 GEA---VIQLSAVDSDAGPNGQVNFRIL-AGDQG--HFLISTSTGVITVAPGVELAMGRS 554

Query: 122 YSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
           Y++TV+A+D G     +SS T V + V+P  N   P F +  Y++ VSE     +T+
Sbjct: 555 YALTVEASDNGAVPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNLEVSEAMRTGATL 611



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 94/184 (51%), Gaps = 26/184 (14%)

Query: 4   VSKENLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           + +E+LD        +  +V A +  ++GT+ +   ++ + + D+NDN P+     P+ +
Sbjct: 652 LDRESLDH-------YTLEVTASDGHQEGTSTA---TVNIVVTDVNDNDPQFDPSLPVNL 701

Query: 62  QAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--- 116
              E +    + +++ATD DLG + ++ Y + +        F I+  +G I T   L   
Sbjct: 702 TVPEEQGHAYVGRVKATDPDLGASGQVHYRLVNHQTM----FSIN-ATGAIRTEAPLDRE 756

Query: 117 IAGEQYSITVQATD--TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
           + G  Y + V+A+D  T  + S+ ++ V+V+   +  SP+F Q +Y  +++E +  ++ +
Sbjct: 757 VKG-HYFLIVEASDGATDPRRSRLMLSVTVL-DVDDNSPIFTQQSYSASLAENSPKHTPI 814

Query: 175 ATIT 178
             +T
Sbjct: 815 LQLT 818



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 13/152 (8%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYH-- 92
           + L+V + D++DN+P           A  + +   I+++ A D DL  N  +TY I    
Sbjct: 779 LMLSVTVLDVDDNSPIFTQQSYSASLAENSPKHTPILQLTALDADLHSN--LTYRIRSEG 836

Query: 93  VSNTGLHKFRIDPRSG------VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-V 145
           V    L  F +DP +G      V++  G   +   Y+ TV+A D GG     +  V+V +
Sbjct: 837 VDPEILRLFHLDPATGELSALKVLDYEGFSESDPSYTFTVEAVDAGGTMPPGLASVTVRI 896

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  SPVF ++ Y   V+  A   + V T+
Sbjct: 897 TDMNDFSPVFGRSLYRGMVAPNAVKGTIVITV 928


>gi|320545183|ref|NP_001036368.2| Cadherin-N2, isoform C [Drosophila melanogaster]
 gi|386769795|ref|NP_609855.3| Cadherin-N2, isoform D [Drosophila melanogaster]
 gi|318068481|gb|ABI31322.2| Cadherin-N2, isoform C [Drosophila melanogaster]
 gi|349732356|gb|AEQ05568.1| MIP30622p1 [Drosophila melanogaster]
 gi|383291548|gb|AAF53636.4| Cadherin-N2, isoform D [Drosophila melanogaster]
          Length = 1799

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 207 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 266

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 267 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 326

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 327 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 385

Query: 174 VATITV 179
           + T+TV
Sbjct: 386 ILTVTV 391



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 20/158 (12%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
           ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I   +Y +
Sbjct: 121 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI---VYFL 177

Query: 94  SNTGLH-------KFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVE 141
           +  G+        KF I+  +G I     L   +     Q+  TV A D GG+      +
Sbjct: 178 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYAD 237

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + V +   N  +P F Q  Y  NV+E  +  S+V T++
Sbjct: 238 IQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMS 275



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 14/159 (8%)

Query: 12  DPPNPGKFRFQVIAREKQ----GTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAG 64
           DP     FRF++   +K     G +    V+ +   V L DINDN P+      I++   
Sbjct: 437 DPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDR-EHIEVSIY 495

Query: 65  EARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGE 120
           E  +    + + +ATD D G ++++ Y I   +N    +F I  R  V I+        +
Sbjct: 496 EDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRK-RQFAISDRGAVSIQRPLDRETQD 554

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
           ++ I + A D G  +      ++V V   N  +P F Q+
Sbjct: 555 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD 593


>gi|195579812|ref|XP_002079753.1| GD21851 [Drosophila simulans]
 gi|194191762|gb|EDX05338.1| GD21851 [Drosophila simulans]
          Length = 2044

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 377 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 436

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 437 AGSSVMTMAAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 496

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 497 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 555

Query: 174 VATITV 179
           + T+TV
Sbjct: 556 ILTVTV 561



 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 14/159 (8%)

Query: 12  DPPNPGKFRFQVIAREKQ----GTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAG 64
           DP     FRF++   +K     G +    V+ +   V L DINDN P+      I++   
Sbjct: 607 DPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDR-EHIEVSIY 665

Query: 65  EARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGE 120
           E  +    + + +ATD D G ++++ Y I   +N    +F I  R  V I+        +
Sbjct: 666 EDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRK-RQFAISDRGAVSIQRPLDRETQD 724

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
           ++ I + A D G  +      ++V V   N  +P F Q+
Sbjct: 725 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD 763


>gi|195483806|ref|XP_002090441.1| GE13116 [Drosophila yakuba]
 gi|194176542|gb|EDW90153.1| GE13116 [Drosophila yakuba]
          Length = 1972

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 322 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 381

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 382 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 441

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 442 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 500

Query: 174 VATITV 179
           + T+TV
Sbjct: 501 ILTVTV 506



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 20/158 (12%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
           ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I   +Y +
Sbjct: 236 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI---VYFL 292

Query: 94  SNTGLH-------KFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVE 141
           +  G+        KF I+  +G I     L   +     Q+  TV A D GG+      +
Sbjct: 293 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYAD 352

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + V +   N  +P F Q  Y  NV+E  +  S+V T++
Sbjct: 353 IQVNLKDINDNAPQFPQGIYFGNVTENGTAGSSVMTMS 390



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 14/159 (8%)

Query: 12  DPPNPGKFRFQVIAREKQ----GTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAG 64
           DP     FRF++   +K     G +    V+ +   V L DINDN P+      I++   
Sbjct: 552 DPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDR-EHIEVSIY 610

Query: 65  EARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGE 120
           E  +    + + +ATD D G ++++ Y I   +N    +F I  R  V I+        +
Sbjct: 611 EDTKVGTILEQFKATDADQGGHSKVAYKIVRATNRK-RQFAISDRGAVSIQRPLDRETQD 669

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
           ++ I + A D G  +      ++V V   N  +P F Q+
Sbjct: 670 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD 708


>gi|66773190|ref|NP_001018640.1| protocadherin 1 gamma 1 precursor [Danio rerio]
 gi|50881498|gb|AAT85329.1| protocadherin cluster 1 gamma 1 [Danio rerio]
          Length = 932

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           +V K +LDR+    G+    + A +      S  V + V + D+NDNAP    P+     
Sbjct: 189 IVLKNSLDRE--TRGEHSLILSAVDGGNPPNSGTVVIEVVVIDMNDNAPLFSQPLYNARL 246

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            +       ++KI ATD D G N EI Y I H+S+     F+ID   G I   G+L    
Sbjct: 247 SENSALGTSVIKITATDEDEGANGEIKYYINHLSDNTKQLFKIDENYGEISVIGQLDHEK 306

Query: 119 GEQYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y + VQA D GG++   + ++E+  V   N  +PV    +    + E  +  + +A 
Sbjct: 307 ASSYEVEVQAEDGGGQTGHCKVVIEIDDV---NDNAPVISVKSLKNKIPENTTPGTEIAV 363

Query: 177 ITVSRLASG 185
           I V    SG
Sbjct: 364 INVKDQDSG 372



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------------PMIPPIQIQAGEA 66
           F  +V+AR+      S  V++ V + D NDN+P++             M+P    +A  +
Sbjct: 523 FSVKVVARDNGSPPLSSNVTVKVFITDENDNSPQILYPVPDGKSLMTEMVP----KATLS 578

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
              + K+ A D D G NA ++Y I   ++ GL  F I   SG I+T   +   +  + ++
Sbjct: 579 GSLVSKVIAVDADSGQNAWLSYQILKSTDPGL--FTIGLHSGEIKTQRDISESDNMKQNL 636

Query: 125 TVQATDTGGKSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            +   D G  S  T   V+++   N +  P  +  +Y+ N       NS + +  +  L 
Sbjct: 637 VISVKDNGQPSLSTTCVVNLLISDNLSEVPELKDMSYEDN-------NSKLTSYLIIALV 689

Query: 184 SGCAIM 189
           S CA  
Sbjct: 690 SVCAFF 695



 Score = 39.7 bits (91), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 21/170 (12%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKIE 74
           ++V  + + G   +    + + ++D+NDNAP + +      IP       E    I  I 
Sbjct: 310 YEVEVQAEDGGGQTGHCKVVIEIDDVNDNAPVISVKSLKNKIPENTTPGTE----IAVIN 365

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKLIAGEQ---YSITVQAT 129
             D D G N+ I+ SI     +    F++ P  +S  I TT   +  EQ   Y++T+ AT
Sbjct: 366 VKDQDSGENSRISCSI-----SPNLPFQLQPYIKSYFILTTSSSLDREQIDNYNVTIIAT 420

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           D G     + + +++ V   N  SP F+ ++Y + +SE     ++V +++
Sbjct: 421 DGGIPPLFSNISLNIQVSDVNDNSPRFELHSYFIYISENKQAGTSVCSVS 470



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 19/154 (12%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEAT---DNDLGVNAEITYSIYHVSN 95
           + + + D+NDN P  P    I+++  E      K++ T   D D+G+N+  TY +    +
Sbjct: 116 IALEVQDVNDNPPVFPK-GSIKLEISEGAPTGSKLQLTRARDLDVGINSVQTYILSQNKH 174

Query: 96  TGLHKFRIDPRSG-------VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVP 146
                F +D +S        V++ +       ++S+ + A D G    S   ++EV V+ 
Sbjct: 175 -----FVLDTKSSKDRYVDIVLKNSLDRETRGEHSLILSAVDGGNPPNSGTVVIEVVVI- 228

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N  +P+F Q  Y+  +SE +++ ++V  IT +
Sbjct: 229 DMNDNAPLFSQPLYNARLSENSALGTSVIKITAT 262


>gi|363730633|ref|XP_426046.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-18 [Gallus gallus]
          Length = 790

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P   + G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 31/194 (15%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++ Y+I +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMKYTIINGDGAGVFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDVTMLKIIV--GDVDEPPLFTMPSYVMEV 392

Query: 165 SEGASINSTVATIT 178
            E A I + V T+T
Sbjct: 393 YENAKIGTAVGTVT 406


>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
          Length = 4981

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIV 71
            N  +  F V + ++   +     ++T+N+ D NDNAP   ++    P+     E   +++
Sbjct: 2945 NINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKIKYFTPVTKNV-EVGTKLI 3003

Query: 72   KIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQA 128
            K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV A
Sbjct: 3004 KVTAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFFITVTA 3061

Query: 129  TDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D G    SSQ  V+++V    N  +P F Q+     + E  SI S V T++
Sbjct: 3062 KDKGNPPLSSQATVQITVTE-ENYHTPEFSQSHMSATIPESHSIGSIVRTVS 3112



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+  +   +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--DQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENMALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FTFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ ++A D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDSTSGQVALIGKLDYEATPAYSLVIEAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F + T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTVSLNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
            K    + A +    A +   S+TVN+ D+NDN+P        P  ++   +   ++ + A
Sbjct: 3159 KHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNA 3218

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A +   
Sbjct: 3219 TDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPD 3275

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   +   V+V + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3276 EERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFAS 3323



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D G N EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGENGEITYIVNEDDEDGI--FFLNPITGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DINDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   +Q  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREDQAFYSLLVLATDMGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S   + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I  TG L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMATGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPESQPVSSLVTTITGSSL 2594



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FR+D  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRLDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G   ++  + V ++++   N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSITLL-DINDFVPIFELSPYSVNVPE 2270



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDTVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+++ + A 
Sbjct: 2634 KYVIWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKVLTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSIRPLDREKVSHYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2897



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  +V ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A ++G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNSGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    ++ TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FTFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E   + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDTVVGSSVLQVAAADADEG 280



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
             +L +++ D NDN P  P           ++ GE    +  + ATD+D G NA++ YSI 
Sbjct: 1299 CTLNIDILDENDNTPSFPKTTLFVDVLENMRIGEL---VSSVTATDSDSGDNADLHYSIT 1355

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +N G   F I P +G I    KL    +  Y + + A D G     + + V + V   
Sbjct: 1356 GTNNHG--TFSISPNTGSIFLAKKLDFETKSLYKLNITAKDQGRPPRSSTMSVVIHVRDF 1413

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            N   P F       ++ E   I ++V ++T
Sbjct: 1414 NDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500


>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
          Length = 3387

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            V + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 1548 VFTLEKLDREIPAEKVIPVRLMAKDAGGKVAFC--TINVILTDDNDNAPQF-RATRYEVN 1604

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             G    +   ++K+ A+D D G NA++TY++   S++      I   SGVI T   LI  
Sbjct: 1605 IGSDAPKGTSVIKVLASDADEGSNADVTYALEADSDSVQENLEIHRLSGVITTKESLIGL 1664

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   ++  V+A D G    +++V V V V  P  R P F +  Y   VSE   I + +  
Sbjct: 1665 EDEVFTFFVRAVDGGSPPRESVVPVYVKVLPPEMRLPKFSEPFYTYTVSEDMPIGTEIDL 1724

Query: 177  I 177
            I
Sbjct: 1725 I 1725



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +I+++ A   D+  NA+ITYSI   +  G  KF ID ++G I     L   +  +Y +TV
Sbjct: 2248 EILQVYAASRDIEANADITYSIIGGNEHG--KFSIDSKTGAIFIIENLDYESSHEYYLTV 2305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V+V V   N  +PVF Q+TY   VSE A +   V T+
Sbjct: 2306 EATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVVSEDAILEQPVLTV 2357



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 87  VIETADRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYSPE 144

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++       +V IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 145 IMENSPKDISVVHIEAFDPDPSSNDKLTYRITSGNPQGF--FTIHPKTGLITTTSRKLDR 202

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           EQ   + + V  TD G     T+  V V +   N   P F Q  Y + + E
Sbjct: 203 EQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQFLQKFYKIRLPE 253



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 1976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 2030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF ++P +G ++T  
Sbjct: 2031 TIP----EDAFPGKLIMQVAATDADIRSNAEITYTLF---GPGAEKFNLNPDTGELKTLA 2083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  V V  +   N  +P F  + + + V E
Sbjct: 2084 PLDREEQAVYNLLVKATDGGGRFCQAHV-VLTLEDVNDNAPEFSADPHTITVFE 2136



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G        + + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 2093 YNLLVKATDGGGRFCQAHVVLTLEDVNDNAPEFSADPHTITVFENTEPGTLLTRVQATDA 2152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+    N+   +F I+  SG+I+    L    Q  Y++TV+A D G    
Sbjct: 2153 DAGLNRKIAYSLI---NSADGQFSINELSGIIQLEKPLDRELQAVYTLTVKAVDQGVPRR 2209

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y  +VSE   + + +  +
Sbjct: 2210 LTATGTVVVSVL-DINDNPPVFEYREYGASVSEDVLVGTEILQV 2252



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 2291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVVSEDA 2348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D  +N+ I YSI    N G + F IDP  G ++ T KL+  E    
Sbjct: 2349 ILEQPVLTVMADDADGPLNSHIHYSIID-GNQG-NPFTIDPTRGEVKVT-KLLDRETISG 2405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF Q  Y V + E   +  +V  + V+
Sbjct: 2406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFAQGNYSVIIQENKPVGFSVLQLVVT 2465



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 15/152 (9%)

Query: 41  VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           V + D NDN P         RLP            R  I ++ A D D G NAEI+YSI 
Sbjct: 230 VKILDENDNKPQFLQKFYKIRLPEREKPDRDRNAKRDPIYRVIAADKDEGPNAEISYSIE 289

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
             +  G  KF I+P++G++ +     AGE   ++++A D G   K S T + +  +  P 
Sbjct: 290 EGNEHG--KFFIEPKTGLVSSKKFSGAGEYDILSIKAVDNGRPQKWSTTRLHIEWISKPK 347

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           P+     F+++ +   V E   +   +  I V
Sbjct: 348 PSLEPISFEESFFTFTVMESDPVAHMIGVIAV 379



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 16/160 (10%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAGEARRQIV 71
            ++F ++AR   G     ASV VS+ V   D NDN+P L   P     ++ Q G +R  ++
Sbjct: 1774 YQFSILARCAHGDHELVASVDVSIQVK--DANDNSPVLESNPYEAFIVENQPGGSR--VI 1829

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
            ++ A+D D G N ++ YS+    +   +  F I+  +G I T  +L   ++  Y I V A
Sbjct: 1830 QVRASDLDSGANGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDSYQIKVVA 1889

Query: 129  TDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G K   S T V    V   N   P F    Y   VSE
Sbjct: 1890 SDHGEKVQLSSTAVVDVTVTDVNDSPPRFTAEIYKGTVSE 1929



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
           F I+P SG I  T K +  E    Y++TVQ T+  G S+ T V V +    N   PVF Q
Sbjct: 710 FTINPHSGSI-ITQKALDFETLPIYTLTVQGTNMAGLSTNTTVLVHL-QDENDNWPVFMQ 767

Query: 158 NTYDVNVSEGASINSTVAT 176
             Y   VSE AS+NS V T
Sbjct: 768 AEYTGLVSESASLNSVVLT 786



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 46   INDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            +NDN P   P +   +I         V  ++A D D      + YSI  +S      F +
Sbjct: 1383 LNDNPPLFDPHVYEAKISEHATHGHFVTCVKAYDADSSDADTLEYSI--LSGNDQKSFVM 1440

Query: 104  DPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            D  +G+I  +   ++     YS+ +  +D   +SS   V V+V+ G N  SPVF QN Y+
Sbjct: 1441 DGETGIITLSNLRQVTLKPFYSLNISVSDGVFRSSAQ-VHVTVIGG-NLHSPVFLQNEYE 1498

Query: 162  VNVSEGASINSTVATI 177
            V ++E A +++ V  +
Sbjct: 1499 VELAENAPVHTLVTAV 1514



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 6/119 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV--IETTGKLIAGEQY-SITV 126
            +  ++ATD D GV   ITY I  V++    +F  + R  V  +E   + I  E+   + +
Sbjct: 1511 VTAVKATDGDAGVYGHITYHI--VNDFARDRFYTNERGQVFTLEKLDREIPAEKVIPVRL 1568

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             A D GGK +   + V ++   N  +P F+   Y+VN+   A   ++V  +  S    G
Sbjct: 1569 MAKDAGGKVAFCTINV-ILTDDNDNAPQFRATRYEVNIGSDAPKGTSVIKVLASDADEG 1626



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V + + + DINDNAP            +A      +V++ ATD D   N  I+Y
Sbjct: 1261 TGAHAEVFVDIVVEDINDNAPVFAQQAYAATLSEASVIGTSVVRVRATDADSEPNRGISY 1320

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVV 145
             +    +     F ID  +GVI     L   +  Q+ I V+A D G    S  +V    V
Sbjct: 1321 HMSGNHSKSHDHFHIDSSTGVISLVRALDYEQVRQHRIAVRAVDGGMPPLSSEVVVTVDV 1380

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F  + Y+  +SE A+    V  +
Sbjct: 1381 TDLNDNPPLFDPHVYEAKISEHATHGHFVTCV 1412



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            FRF V   +  GT    A    ++T+++ DIND  P     +     +       +++ +
Sbjct: 843  FRFTVQVHD-MGTPRLFAEYAANVTIHVIDINDCPPVFSKSLYEASLLLPTYKGVKVITV 901

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
             ATD D    +++ YSI    N G  KF +D ++G I          +Y +TV+A+D G 
Sbjct: 902  NATDADSHAFSQVMYSITE-GNIG-EKFLMDYKTGSITVQNTTQLRSRYELTVRASD-GR 958

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +S + V++ V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 959  FASFSSVKIHVKESKESQLK-FTQDFYSATVKENSTEARTLAVIT 1002



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT----DNDLGVNAEITYSIYH 92
           + VN++D ND+AP            ++      +++I+ +    D    V++ I  + + 
Sbjct: 545 IVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQIDGSPRGGDEGFAVSSMIQTARHR 604

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             N G + F IDP  G I+T  +L    Q  Y + V+ATD G      I  V + V   +
Sbjct: 605 --NIG-NSFTIDPILGSIKTAKELDRSNQVEYDLMVKATDKGSPPLSEITSVHIFVTIAD 661

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             +P F    Y V +SE  SI S V  +T    +S
Sbjct: 662 NAAPRFTSKEYSVEISETISIGSFVGMVTAHSQSS 696



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
           +I++I A D D     E    IY + ++     L KFR+DP SG + T+  L   A  Q+
Sbjct: 471 EILQISAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPASGSLYTSETLDHEAIHQH 525

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  I
Sbjct: 526 VLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQI 581



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 21/143 (14%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLH 99
            D NDNAP    LP    +++ A      I  + A D D G N ++ Y +  +H       
Sbjct: 1073 DQNDNAPVFVNLPYYAVVRVDAA-VGHTIRHVTAVDRDSGRNGDVHYYLKEHH------E 1125

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F+I   SG I            +QY +TV A D G    S++ IV ++V+   N   PV
Sbjct: 1126 HFQIG-LSGDISLKKPFEPDTLNKQYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPV 1181

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F++  Y   + E   ++S V  +
Sbjct: 1182 FEKPFYSAEIPENIQVHSPVVHV 1204



 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
            +F I+  +GVI     L   A   Y ++V+ATD+  G  ++  V++ VV   N  +PVF 
Sbjct: 1226 QFTINFNTGVIHVIAPLDFEAHPAYKLSVRATDSLTGAHAEVFVDI-VVEDINDNAPVFA 1284

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q  Y   +SE + I ++V  +
Sbjct: 1285 QQAYAATLSEASVIGTSVVRV 1305


>gi|431918060|gb|ELK17288.1| Protocadherin Fat 2 [Pteropus alecto]
          Length = 4424

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +   A   V + + + DINDN+P+   +    
Sbjct: 3040 WRIFSRKTLDRE--DMAKYLLRITASDGKFQVA---VIVEIFVLDINDNSPQCSQL---- 3090

Query: 61   IQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+    I      +K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3091 LYTGKVSEDIAPGHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGELTTLT 3147

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L    +  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3148 ALDRERKDIYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3206

Query: 173  TVATI 177
             VA +
Sbjct: 3207 PVAVV 3211



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D+NDNAP         RLP  P   +  G   R +    A+D D G+N  +TYS
Sbjct: 1295 VVVCILDVNDNAPVFSHKLFNVRLPERPS-PVTPGPVYRLV----ASDLDEGLNGRVTYS 1349

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
            I      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P 
Sbjct: 1350 IEETDKEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQAPLSASVRLHIEWIPQ 1406

Query: 148  PNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1407 PRPSSIPMAFDEPHYSFTVMETDPVNHMVGVISV 1440



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P   I Q G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2132 VSIEDVNDNHPEFKHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF----AEDY 2187

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV V+   N  +P+FQ
Sbjct: 2188 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQTKEEVLVIVR-NKSNPLFQ 2246

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2247 SPYYKVRVPENITLYTPI 2264



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 9/168 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            K+   +    K  ++ S   ++ VN+ DIN++ PR P  +     ++       ++ + A
Sbjct: 3362 KYFLSIECSRKGSSSLSDMTTIVVNITDINEHRPRFPKDLYSVRVLENAFVGDVVLTVSA 3421

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3422 TDEDGPLNSAITYSL--VGGNQLGHFDIHPKKGELQ-VAKALDWEQTSSYSLRLRATDSG 3478

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
                   +++++ V   N   P F Q  Y  +V E + I S V  + +
Sbjct: 3479 RPPLHEDIDIAIQVVDVNDNPPRFFQLNYSTSVQENSPIGSKVLQLIL 3526



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDNAP+       + +
Sbjct: 2611 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNAPQFKASEYTVSV 2668

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  + +       I+P +GV++    L+  E
Sbjct: 2669 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSIEDLDEEIIEINPTTGVVKVKESLVGLE 2728

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     ++V + +    N  S P F +  Y  +VSE  S  S + ++
Sbjct: 2729 NRAFDLKIKAQDGGPPHWNSLVLLRLQVVDNEVSLPKFSEPLYSFSVSEDLSEGSEIGSV 2788



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ A D+D GVNAE+ YS    +N G   F I+   G+I    KL   +   Y++TV
Sbjct: 1647 ELLQVRAMDSDRGVNAEVHYSFLKGNNEGF--FNINTLLGIITLAEKLDQAKHARYTLTV 1704

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
            +A D G      +  V +   P+  S P+F +  Y V + E   I S +  ++ +
Sbjct: 1705 KAEDQGSPRWHDLATVIIHVYPSESSAPIFSKAEYFVEIPESIPIGSPILLVSAT 1759



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 14/168 (8%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
            + ++A+   G   S    +T+++ D+NDNAPR  P    + +      +  +  + A D 
Sbjct: 3157 YSLVAKATDGGGQSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVLARDP 3216

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGGK-- 134
            D G NA++ YS+   S  GL  F I+  +GVI     L    Q +  +TV+A+D G    
Sbjct: 3217 DQGANAQVVYSLTD-SAEGL--FSIEATTGVIRLEKPLRVRPQAALLLTVRASDLGTPTP 3273

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
             S+   V VSVV G     PVF    + V V E   + + V   AT+T
Sbjct: 3274 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDTPLGTEVLQLATLT 3320



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2857 VTVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPVDP 2916

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
            ++ +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2917 DSNIHELFAIDSETGWITTLQELDCETRQTYHFYVMAYDNGQTIQLSSQVLVEVSIT-DE 2975

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2976 NDNAPQFASEDYRGSVVENSEPGEPVATL 3004



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 8/166 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEA 75
            K  F V A +    + SV + + V + D+NDN P    ++    +  G  A+  ++++ A
Sbjct: 2312 KHVFTVRATDTALGSFSVAI-VEVLVEDVNDNPPTFSQLVYTTSVSEGLPAQTPVIQLLA 2370

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            +D D G N +++Y I    +     F+I+  +G + T  +L   A + + + V+A D G 
Sbjct: 2371 SDQDSGQNRDVSYQIIEDGSDVSKFFQINGSTGEMSTVKELDYEAQQHFHVKVRAMDRGD 2430

Query: 134  K--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               + +T+V V  V   N   P F+Q  Y+ NVSE A+    V  +
Sbjct: 2431 PPLTGETLVVVG-VSDINDNPPEFRQPQYEANVSELATCGHLVLKV 2475



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGLAST---TVVIDIVDCNNHAPIFNRSSYDGTFDENIPP--------GTT 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI    +     F +DP  G+I TT  +   +    Y+  V
Sbjct: 477 VLTVTATDRDHGENGYVTYSIARPKDV---PFSVDPYLGIISTTKPMDYELMKRIYTFQV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F+Q     ++ E   +  ++ T++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLNNLNDNKPMFEQVNCTGSIREDWPVEKSIMTVS 587



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F ID ++GV+  TG L   +  ++  TV+ATDT  G  S  IVEV +V   N   P 
Sbjct: 2287 LMLFTIDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSVAIVEV-LVEDVNDNPPT 2345

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2346 FSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 2376



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   +      F++DP SGV+ T GKL  G    Q+++
Sbjct: 1533 ELLQVQATDQDKGKG--LIYTIHGSQDPESASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1590

Query: 125  TV-------QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            TV       Q  D      +  V VS+ V   N   P F Q  Y+ N+ +  ++++ +  
Sbjct: 1591 TVMVSSLKNQVRDQEMPIKRNFVWVSIQVEDGNLHPPRFTQLHYETNIPDTTALDTELLQ 1650

Query: 177  I 177
            +
Sbjct: 1651 V 1651



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 15/116 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
           +  + ATD+D G N ++ Y I   +  G   F I+  +G++        ETT   I    
Sbjct: 734 LAHLAATDSDTGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYETTSFYIL--- 788

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++TV    T  KSS  ++ V+V    N  +P+F    Y V +SE   + +T+A +
Sbjct: 789 -NVTVYDLGTPQKSSWKLLTVNVKDW-NDNAPIFPPGGYQVTISEDIEVGTTIAEL 842



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 15/126 (11%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I ++ ATD DLG NAE  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICQVTATDADLGQNAEFYYAF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGP 148
                F I P SGV+   GKL      +Y + V A D   K S+      +  + ++  P
Sbjct: 189 MRSEIFAIHPTSGVVTLAGKLNVTWRGKYELQVLAVDRMRKISEGNGFGNLAALVILVEP 248

Query: 149 NTRSPV 154
             R P+
Sbjct: 249 ALRKPL 254



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNA   P+ PP   Q       E    I +++A D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNA---PIFPPGGYQVTISEDIEVGTTIAELKAKDADSDDNGRVHYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +   G L   +  QY   V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELVVIGHLDRESEPQYIFKVEARDQPRKGHQ 904



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 28/153 (18%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP---------RLPM- 55
            +LDR+  +  ++ F+V AR+  ++G        LTV L D+NDN+P         ++P  
Sbjct: 880  HLDRE--SEPQYIFKVEARDQPRKGHQLFSVTDLTVALEDVNDNSPQCITEFSSLKVPED 937

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +PP  I        +  ++A D DLG   E+ Y +   ++     F++D  +G +    +
Sbjct: 938  LPPGTI--------LTFLDAFDPDLGPAGEVRYILLDDAHG---TFQVDLMTGALSLEKE 986

Query: 116  LIAGEQ--YSITVQATDTGGK-SSQTIVEVSVV 145
            L    Q  Y++++ A+D+    S +T+  V V+
Sbjct: 987  LDFERQAGYNLSLWASDSWRPLSRRTLCHVEVI 1019



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 17/128 (13%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           VS+++ LN++NDN P    +       +     + I+ + A D D   N +  +    VS
Sbjct: 548 VSVSLRLNNLNDNKPMFEQVNCTGSIREDWPVEKSIMTVSAIDVDELQNLKYEF----VS 603

Query: 95  NTGLHKFRIDPRSGVI--------ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
              L  F ++  SGVI         TTG+ I    YS+ + A+D    +S T + +++V 
Sbjct: 604 GNELEYFDLNHFSGVISLKRSFMNHTTGQFI---NYSLKITASDGKYYASPTTLNLTIVK 660

Query: 147 GPNTRSPV 154
            P    P+
Sbjct: 661 DPRFEVPI 668


>gi|302564429|ref|NP_001181814.1| protocadherin beta-13 precursor [Macaca mulatta]
          Length = 753

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDREAE--AELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G IE   +L   
Sbjct: 252 ISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|195471220|ref|XP_002087903.1| GE14764 [Drosophila yakuba]
 gi|194174004|gb|EDW87615.1| GE14764 [Drosophila yakuba]
          Length = 5024

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A +    L +++ND+ND+ P         +  +    
Sbjct: 446 LDRE--EIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 503

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F +DP +G+I TTG L     +   +
Sbjct: 504 GSFVASITATDEDTGVNAQVHYDI--LSGNELKWFSMDPLTGLIVTTGPLDREIRDTVEL 561

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           ++ A D G   K + T ++V ++   N  +P F Q   +V +SE A   + VA +T +  
Sbjct: 562 SISARDGGPNPKFAYTQLKV-IILDENDEAPQFSQREQNVTLSEDAPPQTIVALMTATDH 620

Query: 183 ASG 185
             G
Sbjct: 621 DQG 623



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            ++  + LDR+     K ++++  R   G   +   + T+ ++D NDN P     +    I
Sbjct: 1755 LILNDTLDRET----KSKYELRIRVSDGVQYTETYA-TIQVSDTNDNPPLFEDTVYSFDI 1809

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ +I A D DLG NA+++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1810 PENAQRGYQVGQIVARDADLGQNAQVSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1867

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D G  S  T + V   V   N  +P+F   +Y   V E   I + V T+
Sbjct: 1868 VQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTV 1927

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 1928 SAKDIDSG 1935



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            + ++  LDR+    G + F V A ++     +   S+ ++L D NDN P+   +  + + 
Sbjct: 2743 IYTRMRLDRE--EIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLFSLNVT 2800

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +  E    ++++ ++D DLG NA  +YS     N G  KFRI+P+SG I   G L   +Q
Sbjct: 2801 ENAEIGSFVIRVTSSDLDLGANANASYSF--SENPG-EKFRIEPQSGNITVAGHLDREQQ 2857

Query: 122  --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              Y + V A+D G   ++T + ++ +   N  +P F+ + Y  +  E
Sbjct: 2858 DEYILKVVASD-GAWRAETPITIT-IQDQNDNAPEFEHSFYSFSFPE 2902



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            R P    + R + +A +KQ   +S  V +T+ + D+ND  P         I    A   +
Sbjct: 2004 RSPRKYQQTRQEFLAHQKQQRLSST-VKVTILIKDVNDEVPIFVSANETAIMENVAINTV 2062

Query: 71   V-KIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AGEQY 122
            V  ++A DND G N  I Y +   S+  + +     F ++P  G +     L       Y
Sbjct: 2063 VIAVKAVDNDEGRNGYIDYLMKEASDEDMGQLDPLPFSLNPTDGQLRVVDALDRELRSSY 2122

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             + + A D G   +S++T + + ++   N  SPVF    Y  +V+E ASI + V  ++ +
Sbjct: 2123 LLNITARDRGEPPQSTETQLLIRIL-DENDNSPVFDPKQYSASVAENASIGAMVLQVSAT 2181

Query: 181  RLASGC 186
             +  G 
Sbjct: 2182 DVDEGA 2187



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT++++D+NDN P+       +  P +I  GE    +    A D D G NA + Y+I 
Sbjct: 2458 VNLTISVSDVNDNIPKFDSTHYNVAVPERISKGEF---VFGARALDLDDGENAVVHYTI- 2513

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
              S    H F I+ ++GV+ T  +L    +      Y+I + A D G +   +  E++++
Sbjct: 2514 --SGRDQHYFDINTKTGVVSTKLELKTRTKSPDDLTYTIVISAMDQGEQPLSSKAELTII 2571

Query: 146  PGPNTRSPVF 155
              P    P F
Sbjct: 2572 LRPPELFPTF 2581



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 45/204 (22%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------------RL 53
           NLDR+  + G ++  + AR+         + + V + D+NDN P               L
Sbjct: 227 NLDRE--SRGSYQLNISARDGGTPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETAL 284

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
           P  P            +  + A+DNDLG N++ITY +        H+F ++P +GVI TT
Sbjct: 285 PGTP------------VATVMASDNDLGDNSKITYYLAETE----HQFTVNPETGVISTT 328

Query: 114 GKLIAGEQYS-----ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV-----FQQNTYD 161
            ++   +Q +      TV A D G   +  +T V V+++   N   P+     F      
Sbjct: 329 ERVNCPQQKNQKSCVFTVFARDHGSPRQDGRTYVTVNLL-DTNDHDPIISFRFFPDGGKV 387

Query: 162 VNVSEGASINSTVATITVSRLASG 185
             V E A   + VA + V    SG
Sbjct: 388 ATVDENAVNGTVVAAVAVKDSDSG 411



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
            +N+ D ++N P+      + P+   A   +R IV++ A D  DLG N E+ YS+   + +
Sbjct: 2990 INIVDAHNNPPKFEQEEYLAPLPQDAVRGQR-IVRVHANDKQDLGTN-EMDYSLMTFNLS 3047

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
             +  F I    G I      ++    +Y + V+ATD G   +S +T V V VV G N  +
Sbjct: 3048 SI--FTIGRHDGWITLVRPIQVPPNSRYELVVRATDHGVPPQSDETRV-VIVVTGENLDT 3104

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F  N+Y V V E   + ST+ T+
Sbjct: 3105 PRFSVNSYQVIVPENEPVGSTILTV 3129



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
           + P+ + + + D+NDN+P  P  P I I   E+     +++   ATD D+G N  +T   
Sbjct: 137 TYPIEVRIKVLDVNDNSPEFPE-PSIAISFSESATTGTRLLLDAATDADVGENG-VTDQY 194

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ETTG L    +  Y + + A D G       +
Sbjct: 195 EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGTPPRFGYL 254

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y+V+++E A   + VAT+  S
Sbjct: 255 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVATVMAS 295



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQ 62
            LDR+  +   +   V  R+    + S  V + +++ D NDNAP+         IP    +
Sbjct: 989  LDREERD--YYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIP----E 1042

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--------- 113
               A   + K+ A D D+G NAE+++++    ++    F ID R+G I+T          
Sbjct: 1043 NAPADTFVGKLTAVDRDIGRNAELSFTL----SSQTQDFTIDTRNGFIKTLRPFDREALV 1098

Query: 114  ------------GKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
                        G L   +AG    +    +D G    Q  V+V V V   N  +P F +
Sbjct: 1099 KVSRNAEAGGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLR 1158

Query: 158  NTYDVNVSEGASINSTVATI 177
              Y V +SEGAS  + +A +
Sbjct: 1159 APYHVTISEGASEGTHIAHV 1178



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 20/160 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++     S    L + + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2122 YLLNITARDRGEPPQSTETQLLIRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2178

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             ATD D G N  I YSI  V     H F I   +GV+     L      +YS+TV+A D 
Sbjct: 2179 SATDVDEGANGRIRYSI--VLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDC 2236

Query: 132  -----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                  G +++  + +  +   N   P F  + Y   V E
Sbjct: 2237 ALENPAGDTAELTINILDI---NDNRPTFLDSPYLARVME 2273



 Score = 42.7 bits (99), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 11/149 (7%)

Query: 45  DINDNAPRLPMI----PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLH 99
           D+NDNAP   +     P I +    A  Q + +    D D GVN+ I+YS+    N    
Sbjct: 812 DLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTQNPN---Q 868

Query: 100 KFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQ 156
           +FRI   +GV+     + A  G    + + ATD G    S  +    ++   N  +PVF 
Sbjct: 869 QFRIGAVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFD 928

Query: 157 QNTYDVNVSEGASINSTVATITVSRLASG 185
             +Y+ ++ E   +N+    +  + +  G
Sbjct: 929 HTSYETSLPETTKVNTRFFALAATDIDLG 957



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  ++A+D D G N  +   IY + N 
Sbjct: 2674 ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNV---IYRLQND 2730

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I T  +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2731 FDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPP 2789

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             F +  + +NV+E A I S V  +T S L  G 
Sbjct: 2790 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLGA 2821



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 41   VNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + DINDN P   L        +   A   ++   ATD D G+NA++ +++       +
Sbjct: 2357 VEVQDINDNDPVFELHSYHATVRENLPAGTHVLSPRATDKDEGLNAKLRFNLL---GEHM 2413

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---TGGKSSQTIVEVSVVPGPNTRSP 153
            H+F ID  +G I T   L   E   Y +T+ A D   T  ++S   + +S V   N   P
Sbjct: 2414 HRFHIDSETGEISTATTLDREETAVYHLTLMAQDSSITEPRASSVNLTIS-VSDVNDNIP 2472

Query: 154  VFQQNTYDVNVSE 166
             F    Y+V V E
Sbjct: 2473 KFDSTHYNVAVPE 2485



 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+T+ + D NDNAP           ++      ++++  A+D D GVN+++ +SI   + 
Sbjct: 1247 SITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSI--SAG 1304

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
                 F ID  +G +     L   +   Y++ + A+D G  S S T++   +V   N   
Sbjct: 1305 NRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNP 1364

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P+F        + EG  + + + T+T     SG
Sbjct: 1365 PIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSG 1397



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 83   NAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG- 133
            +AEI Y + +V+  G        F ID + G++ T  +L   AG E+Y + V A   GG 
Sbjct: 1620 SAEIEYFVTNVTAVGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQ 1679

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++S+T V V+V+   N   P F  + +  NVSE   I  T++T+
Sbjct: 1680 PRTSRTKVRVTVL-DKNDSPPQFLDSPFVYNVSEDLQIGHTISTL 1723



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +   + ATD DLG N  I+Y I  +       F + P  G +     L   E+  Y++TV
Sbjct: 945  RFFALAATDIDLGDNGRISYEI--IEGNSERMFGVFP-DGFLFVRAPLDREERDYYALTV 1001

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               D G  S  ++V V + V   N  +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1002 SCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1054


>gi|189237687|ref|XP_969192.2| PREDICTED: similar to Neural-cadherin precursor (Cadherin-N
           protein) (DN-cadherin) [Tribolium castaneum]
          Length = 3035

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 627 LAKELDFEDLRQPHVYSLVVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 684

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D D G NAEI Y +          F +DP SG+I    +L A 
Sbjct: 685 VDEDIPPGTSILKVKAMDADSGANAEIEYLVSD------DHFSVDP-SGIISNNKQLDAD 737

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  +      V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 738 NNNAYYEFVVTAKDKGEPAKTGTATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 797

Query: 176 TITVS 180
           T+  S
Sbjct: 798 TVVAS 802



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 873  VVVFITDVNDNKPIFKDCGTYYPKVE-EGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQP 931

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 932  NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDV 990

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 991  NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1022



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 76/170 (44%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDN P  P    +    + G 
Sbjct: 1505 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNPPTFPQGIYLGNVTENGT 1564

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+  +GVI+T    +  
Sbjct: 1565 AGMVVMTMTAVDYDDPSEGTNARLVYSIEKNVIEEETGSPIFEIESETGVIKTAVCCLDR 1624

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1625 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1673



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 9/171 (5%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 960  GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1019

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+   SN   L  F I P SG I    K +  E Y +   A D G
Sbjct: 1020 SASDEDADNNGAIVYSLNAGSNAADLEYFEIQPESGWI-VLKKALDRETYKLEATAQDKG 1078

Query: 133  GK--SSQTIVEVSVVPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                S    V++ VV   N   PV+    Y  + + E   + + V ++  S
Sbjct: 1079 YPPLSRSVEVQIDVVDRANN-PPVWDHVIYGPIFIRENLPVGAKVVSVKAS 1128


>gi|357610680|gb|EHJ67094.1| DN cadherin-like protein [Danaus plexippus]
          Length = 925

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTA----ASVPVS---LTVNLNDINDNAPRLPMIPPI-- 59
           LDRD     K+   V A +         A++  S   + V + D+NDN P     P    
Sbjct: 373 LDRD-----KYELNVTAMDDGACCVNGDATIHTSTAVVVVFITDVNDNKPIFKDCPTYFP 427

Query: 60  QIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
           +++ G      ++K+ ATD D GVN ++ YSI    N    KF +D  +G + +T K+  
Sbjct: 428 KVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEV-STNKVFD 486

Query: 118 ----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI +
Sbjct: 487 REGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGT 546

Query: 173 TVATITVS 180
            +  ++ S
Sbjct: 547 NILRVSAS 554



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 159 LAKELDFEDLRQPHVYSLVVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 216

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 217 VDEDIPLGTSILKVKAMDADSGKNAEIEYLVSD------DHFSVD-SNGIITNNKQLDAD 269

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y  +V A D G  +      V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 270 NNNAYYEFSVTAKDKGEPAKTGTATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 329

Query: 176 TITVS 180
           T+  S
Sbjct: 330 TVVAS 334


>gi|432930213|ref|XP_004081376.1| PREDICTED: cadherin-7-like [Oryzias latipes]
          Length = 792

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 17/151 (11%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             V + DINDN P+    P     P    AG    Q+   +A D   G NA++ YSI   
Sbjct: 138 FIVKVQDINDNVPQFQNEPYVSSIPEMSPAGTTVAQVTATDADDPMFGNNAKLIYSILQ- 196

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F ++P++G++ T+   +  E   +Y + +Q  D    +GG SS T + V ++ 
Sbjct: 197 ---GEPYFSVEPKTGIVVTSWPDLDRETRDEYLVVIQVQDMLGLSGGYSSSTTLTV-ILT 252

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P FQ+  Y  NV E A+I STV  I
Sbjct: 253 DVNDNGPTFQRQLYTFNVPENAAIGSTVGRI 283



 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 22/195 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQ 60
           +V S  +LDR+  +      QV          S   +LTV L D+NDN P     +    
Sbjct: 210 VVTSWPDLDRETRDEYLVVIQVQDMLGLSGGYSSSTTLTVILTDVNDNGPTFQRQLYTFN 269

Query: 61  IQAGEARRQIV-KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +    A    V +I A D D+G+NA +TYS+   +  +     + DP    +   G+L+ 
Sbjct: 270 VPENAAIGSTVGRIIADDGDIGINARMTYSLEDDLEESSTFIIKTDP----VTQEGQLLL 325

Query: 119 GE--------QYSITVQATDTGGKSSQTIVE-------VSVVPGPNTRSPVFQQNTYDVN 163
            +        +Y + V+A +    +    +E       + +V       P F    Y+  
Sbjct: 326 AKPLDYESKRRYKMAVEAINDHVDTRFLPLEEFKDSTAIKIVVRDVDEPPAFVSPVYEWK 385

Query: 164 VSEGASINSTVATIT 178
           V E A++ + V +I+
Sbjct: 386 VPENAAVGTVVGSIS 400


>gi|410899192|ref|XP_003963081.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
           [Takifugu rubripes]
          Length = 2908

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           VN+ND+NDNAP+  + P  Q    E       +++I ATD D   N  + Y+ +     G
Sbjct: 665 VNVNDVNDNAPQF-LSPRYQGSVSEDAPPYTSVLQISATDRDAHANGRVQYT-FQNGEDG 722

Query: 98  LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
              F I+P SG++ T  +L       Y +T  A D G    +T V + V V   N  +PV
Sbjct: 723 DGDFTIEPTSGILRTVRRLDRESVPFYELTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPV 782

Query: 155 FQQNTYDVNVSEGASINSTVATITVS 180
           F  + ++V V E +++ S VA IT +
Sbjct: 783 FPADDFEVLVKENSAVGSVVAQITAT 808



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ + + LDR+  +   FR  V A +      S    + + ++D ND++P        Q 
Sbjct: 102 LITTTQILDREHMDLHYFR--VTATDYGSARLSGTTMVAITVSDRNDHSPIFE-----QT 154

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYS-IYHVSNTGLHKFRIDPRSGVIETT 113
           +  E  R+       I+++ ATD+D   NA I Y  I  +       F IDPRSG+I T 
Sbjct: 155 EYRETIRENVEEGYPILQLRATDSDSPTNANIRYRFIGDMVAVARAAFEIDPRSGLITTR 214

Query: 114 GKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y++ V+A+D G   G  S T+     V   N   P F +  Y V V E  
Sbjct: 215 GVVDRELNEHYTLQVEASDQGKEPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKENV 274

Query: 169 SINSTVATITVS 180
             +S +  ++ +
Sbjct: 275 RPHSEILRVSAT 286



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD+D+G NA ITY +       + +FRID  +G I    +L   +Q  Y++ + 
Sbjct: 593 VVVISATDDDVGENARITYFL----EDNIPQFRIDSATGAITLQAELDYEDQMTYTLAIT 648

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   KS  T VEV+ V   N  +P F    Y  +VSE A   ++V  I+ +
Sbjct: 649 AKDNGIPQKSDTTYVEVN-VNDVNDNAPQFLSPRYQGSVSEDAPPYTSVLQISAT 702



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 10/191 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  +DR+       + +   + K+    S  V + + + D NDN P+      +  
Sbjct: 210 LITTRGVVDRELNEHYTLQVEASDQGKEPGPRSATVKVFITVLDENDNVPQFSEKRYVVA 269

Query: 62  QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
                R   +I+++ ATD D   NA + Y+I  +S     +F ID  +G I+    L   
Sbjct: 270 VKENVRPHSEILRVSATDRDKDSNAAVHYNI--ISGNSRGQFSIDSVTGEIQVVAPLDYE 327

Query: 118 AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
           A  +Y++ V+A D G     ++  IV V V    N   P+F    +  +V E + + S++
Sbjct: 328 AEREYTLRVRAQDNGRPPLSNNTGIVSVQVT-DVNDNPPIFVSTPFQASVLESSPVGSSI 386

Query: 175 ATITVSRLASG 185
             I      SG
Sbjct: 387 LHIQAIDTDSG 397



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 30/193 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V  +  LDR+      + F V AR+      S   S+T+ + D+NDN P         +
Sbjct: 423 WVTVRSALDRESVE--HYFFGVEARDYGTPPLSATASVTITVMDVNDNRPEF-------L 473

Query: 62  QAGEARR---------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR--SGVI 110
           Q     R          +  + A D D  VN+ +TY I        ++F I     +G++
Sbjct: 474 QKEYYSRLNEDAAVGTSVATVTAVDRD--VNSAVTYQI--TGGNTRNRFAISTAGGAGLL 529

Query: 111 ETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
                L   ++  Y +TV A+D   ++     +V + +   NT  PVFQ   Y V+V+E 
Sbjct: 530 SLALPLDYKQERRYVLTVTASD---RTLHDTCQVHINITDANTHRPVFQSAHYSVSVNED 586

Query: 168 ASINSTVATITVS 180
           +   S V  I+ +
Sbjct: 587 SPPGSLVVVISAT 599



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 36  PVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHV 93
           PV + V + D+NDNAP  P     + ++   A   +V +I ATD D G NA+I Y I  V
Sbjct: 766 PVHIQVTVLDVNDNAPVFPADDFEVLVKENSAVGSVVAQITATDPDEGANAQIMYQI--V 823

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
                  F++D  SG + +   L      +Y I VQAT
Sbjct: 824 EGNIPEIFQMDIFSGELTSLIDLDYETRNEYVIVVQAT 861


>gi|390470196|ref|XP_002807360.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Callithrix
           jacchus]
          Length = 3297

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 521 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 578

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 579 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 632

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  +TV ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 633 ISLDYELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 692

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 693 GTCFLQVTATDADSG 707



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 20/181 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEAT 76
            R +++ + + G A +  V LT+ L D NDNAPR  + P       E+R     ++++EA 
Sbjct: 2138 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRF-LRPHYVAFLPESRPFEGPLLQVEAD 2195

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG- 132
            D D G   +I+YS+   S      F +DP +G+I T   L   I  E   + + ATD G 
Sbjct: 2196 DLDQGSGGQISYSLA-ASQPAHGLFHVDPATGIITTIAILDREIWAETRLVLI-ATDRGS 2253

Query: 133  ----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
                G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  +
Sbjct: 2254 PALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVL 2308

Query: 189  M 189
             
Sbjct: 2309 W 2309



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2343 RYQLQLLAHDGPHEGYA-----NLTVLVEDVNDNAPAFSQSLYQVMLLENTPPGSAILSV 2397

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  + +A G + S    + ++A
Sbjct: 2398 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVETVALGHEGSGAVDVVLEA 2453

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2454 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLPHYRVAVTEDLPPGSTLLTL 2503



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD DLG N ++TY   
Sbjct: 1634 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTYG-- 1686

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV++T   L   EQ  I  TV A D G     T V + V V   
Sbjct: 1687 GVSS---ESFSLDPDTGVLKTLRALDREEQEEINLTVYAQDRGSPPQLTHVTIRVAVEDE 1743

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1744 NDHTPTFGSAHLSLEVPEG 1762



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + LTV + D ND+AP    +P   ++  E   A   +++++A
Sbjct: 1820 FQLKIEARDGGQPALSATLLLTVTVLDANDHAPAF-SVPAYSVEVPEDVPAGTLLLQLQA 1878

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1879 HDPDAGANGRVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCSSYTFSVSAVDGAA 1935

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+    +V   N  +P F
Sbjct: 1936 AGPLSTTVSVTIMVRDVNDHAPTF 1959



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 306 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 362

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L
Sbjct: 363 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPL 419

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 420 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 479

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 480 PGQLVARISVS 490



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 981  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 1033

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 1034 AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHELELEARDGGSPPRISHFRLRVVVQDVGTR 1093

Query: 150  TRSPVFQQNTYDVNVSEG 167
              +P F   TY V++  G
Sbjct: 1094 GLAPRFDSPTYRVDLPSG 1111



 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1223 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGELTTLQTLDREQQSSYQLLVQ 1281

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
              D G  S  T   V V V   N  SP F Q
Sbjct: 1282 VQDGGSPSRSTTGTVHVAVLDLNDNSPTFLQ 1312



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2671 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2727

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2728 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARMPFDYEHTESFR 2781

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2782 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2825



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 205 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 251

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
                      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 252 PEHTVFGTRYPLEPAHDADAG---HLGTQGYALSGDGAGETFRLETRPGPDGAPVPELVV 308

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 309 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 367

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 368 APGSPVLQVFASDADAGA 385



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+ P        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1734 VTIRVAVEDENDHTPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1793

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1794 SG--AFVLDLTSGEFGTMRPLDREVEPAFQLKIEARDGGQPALSATLLLTVTVLDANDHA 1851

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1852 PAFSVPAYSVEVPE 1865



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 31/185 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
            +R   +  E  G A +  + + V + D N++AP     P     P   + G A   +   
Sbjct: 1491 WRALTVRAEGPGGAGARLLRVQVRVQDENEHAPTFARDPLALALPENPEPGAA---LYTF 1547

Query: 74   EATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---------------I 117
             ATD D  G N+++ Y +       +   R+D R+G +     L               +
Sbjct: 1548 RATDADGPGPNSDVRYRLLR-QEPPVPALRLDARTGALSAPRGLDRXXXXXXRFPWCGPL 1606

Query: 118  AGEQ---YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              EQ   + +TV A+D G   +S+  ++ VSV    N  +P FQQ  Y V + E +   +
Sbjct: 1607 DREQRAEHVLTVMASDHGSPPRSATQVLTVSVA-DVNDEAPTFQQQEYSVLLRENSPPGT 1665

Query: 173  TVATI 177
            ++ T+
Sbjct: 1666 SLLTL 1670


>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
 gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
          Length = 3594

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 14/165 (8%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +S  +LDR+     ++  Q+ A ++ Q        +++V + D NDN PR  +   +   
Sbjct: 1910 LSARSLDRE--QHSRYTLQLQASDRGQPITHQGHCNISVFVEDQNDNEPRFELAKYMASV 1967

Query: 63   AGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A  A     +++I+A+D DLGVN+ + YS+   +N    +F ID +SG+I T GKL    
Sbjct: 1968 AENAAIGSSVLRIKASDADLGVNSRLVYSL---ANETQWQFAIDSKSGLITTVGKLDREL 2024

Query: 121  Q--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
            Q  YS  V ATD G    +S    V+++V+   N   P+F++  Y
Sbjct: 2025 QSSYSFMVLATDCGRYEVRSGSVAVQINVL-DINDNKPIFERYPY 2068



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR--LPMIPP 58
           YLV+    LDR+  +   +   VIA +K         S+ + + D+NDNAP   L +   
Sbjct: 442 YLVIVNLPLDREATS--NYTLSVIATDKGTPPLHASKSIFLRVTDVNDNAPEFELDVYHA 499

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    +++++A D D G NA ++Y++    +T    F+ID ++G+I T   +  
Sbjct: 500 NVMEVADPGTSVLQVQARDRDEGNNAALSYALADTPDTHAQWFQIDTQTGLITTRSHIDC 559

Query: 119 GEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +    +TV A D GG+   S T   +  +   N   P+F Q+ Y+V+V+E   +   +
Sbjct: 560 ETEPVPQLTVIARD-GGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCI 618

Query: 175 ATITVSRLASGCAIM 189
             ++ S    G   M
Sbjct: 619 LKVSASDPDCGVNAM 633



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 15/186 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRL--PMIP 57
            + ++E LDR+      +   V AR+ QGT   +A  PV +TV   D+NDNAP +  P   
Sbjct: 1212 ISTREPLDRELRE--LYDLVVEARD-QGTPTRSARAPVRVTVT--DVNDNAPEIADPQED 1266

Query: 58   PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGK 115
             + ++  +    ++V+I A D D G NA I YS+    ++  H  F ID  +G+I T   
Sbjct: 1267 VVSVREEQPPGTEVVRIRAIDRDHGQNASINYSLLKGRDSDGHGLFSIDANTGIIRTRVM 1326

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L   E+  Y + V ATD G    QT+  + V V   N   P F  ++    V E A +  
Sbjct: 1327 LDHEERSIYRLAVAATDGGNPPKQTLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAVVGH 1386

Query: 173  TVATIT 178
             V +I+
Sbjct: 1387 VVGSIS 1392



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 18/175 (10%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T+   PV     + + + D+NDNAP     M+     +  E    +    A D D G 
Sbjct: 891  QATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHAHDKDSGS 950

Query: 83   NAEITYSIYH--VSNTGLHK-------FRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            + ++TYS+ +   + +G  K       F ID RSG +  +  L     +++S+ V ATD 
Sbjct: 951  SGQVTYSLANGNATKSGKQKAAQASSLFAIDARSGHLVLSRHLDYETAQRHSLIVTATDA 1010

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G       + + V V   N   PVF+++ Y VNVSE  SIN+ +  +  S L +G
Sbjct: 1011 GLPPLSADLTILVDVQDVNDNPPVFERDEYAVNVSESRSINAQIIQVNASDLDTG 1065



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            L+ +   LDR+  +   + F V+A +  +    S  V++ +N+ DINDN P     P   
Sbjct: 2013 LITTVGKLDRELQS--SYSFMVLATDCGRYEVRSGSVAVQINVLDINDNKPIFERYPYSG 2070

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG----LHKFRIDPRSGVIE 111
              P  IQ G+    ++K++A D D G N E+ Y++   S  G      KFRI+P +G + 
Sbjct: 2071 QVPALIQPGQT---LLKVQAHDADQGSNGEVLYALKADSLLGSAAIRSKFRINPNTGALS 2127

Query: 112  TTGKLIA--GEQYSITVQATDTGG--KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             T  L +  G    + V A D G   +SS  ++E+ V    P      FQ  TY + + E
Sbjct: 2128 ATQSLASETGNLLQLEVIARDKGNPPQSSVGLIELMVGEASPTAPQLHFQNETYRMKLRE 2187



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 11/150 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L +++ D+NDNAP  R      + +        I  + A+D D G NAEI YSI    N
Sbjct: 1838 TLIISIGDVNDNAPEFRPGSCYGLSVPENSETAIIHTVVASDLDEGPNAEIVYSIIG-GN 1896

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK-SSQTIVEVSV-VPGPNT 150
             G +KF ID R+G  E + + +  EQ   Y++ +QA+D G   + Q    +SV V   N 
Sbjct: 1897 LG-NKFSIDARTG--ELSARSLDREQHSRYTLQLQASDRGQPITHQGHCNISVFVEDQND 1953

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P F+   Y  +V+E A+I S+V  I  S
Sbjct: 1954 NEPRFELAKYMASVAENAAIGSSVLRIKAS 1983



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 11/130 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV-- 93
              ++L+D NDNAP+ P+   +    GE   A   I +  ATD D G   ++ YS+     
Sbjct: 2867 FQLSLHDENDNAPQFPLGEYVHF-LGENEPAGSSIFRAHATDLDRGAFGQLNYSLVAAED 2925

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNT 150
             ++    FR+D  SG++ ++  +   EQ   Y++ ++A+D GG+S++  + V  +   + 
Sbjct: 2926 DDSSWRLFRVDATSGIV-SSAAVFDYEQRQRYNLQLRASDMGGRSARVALRVE-IESRDE 2983

Query: 151  RSPVFQQNTY 160
             +P F + TY
Sbjct: 2984 FTPQFTERTY 2993



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 10/170 (5%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
           L+ ++ ++D +  P P   +  VIAR+      S   ++ V ++D+NDN P        +
Sbjct: 550 LITTRSHIDCETEPVP---QLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNV 606

Query: 60  QIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            +   E   R I+K+ A+D D GVNA + Y++       L +F +   SG I   G+L  
Sbjct: 607 SVAENEPVGRCILKVSASDPDCGVNAMVNYTLGE-GFKHLTEFEVRSASGEICIAGELDY 665

Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +  Y   V ATD GG S+  ++++ +    + R PVF    Y+V++ E
Sbjct: 666 ERRNSYEFPVLATDRGGLSTTAMIKLQLTDVNDNR-PVFYPREYNVSLRE 714



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 23/149 (15%)

Query: 38   SLTVNLN--DINDNAPRLPMIPPIQ------IQAGEARR---QIVKIEATDNDLGVNAEI 86
            S+TV L   D NDNAP+  ++P         +   +A R    +  I A D D G N  I
Sbjct: 1591 SVTVRLRILDANDNAPQF-VVPSTSGGGAATVYVSDATRIGEMVTHILAVDRDAGENGRI 1649

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQ------YSITVQATDTG-GKSSQT 138
            +Y I  V+  G  +FRI P+SG+IE    L  A EQ      +++T++A+D G     QT
Sbjct: 1650 SYDI--VNGNGEGRFRIKPQSGIIELAKTLPPAFEQLDKTGRFTLTIRASDHGVPNPKQT 1707

Query: 139  IVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             + + + V G ++  P F Q  Y   + E
Sbjct: 1708 TLSLQLMVQGSHSNPPRFLQAVYHATILE 1736



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI------QAGEARRQIV 71
           + F V+A ++ G + +  + L   L D+NDN P   P    + +      QA      IV
Sbjct: 671 YEFPVLATDRGGLSTTAMIKL--QLTDVNDNRPVFYPREYNVSLRESGPAQASSTPMPIV 728

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI----ETTGKLIAGEQYSITVQ 127
            + ATD D G   +++Y I   +  G+  FRID  SG I    +    +     + + + 
Sbjct: 729 AVVATDPDAGSFGQVSYRIVAGNEGGI--FRIDRASGEIFVIRQDMLSVRTQPMHMLNIS 786

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           ATD GG   S+  +V +S++     R P+F++  Y+  V E    G  + S +AT
Sbjct: 787 ATDGGGLRTSTDAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDVPRGTVVGSVIAT 840



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 22/168 (13%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITY-- 88
            S  +++ V++ D+NDN P         +   E+R    QI+++ A+D D G NA ITY  
Sbjct: 1016 SADLTILVDVQDVNDNPPVFER-DEYAVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1074

Query: 89   -------------SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
                         S+  V       F I P SG I     L   + ++Y +TV ATD G 
Sbjct: 1075 VDAGADNASQSSASVSGVDTDLAQHFGIFPNSGWIYLRAALDRESRDRYELTVLATDNGT 1134

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             ++     V V V   N   P F + +Y   + E     + V  ++ +
Sbjct: 1135 PAAHARARVLVRVLDSNDNDPKFLRESYAFKIEENLRRGAVVGVVSAT 1182



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LVV+++ LDR+  +  +   + +         S  +++ + + D+NDNAP  P   PI++
Sbjct: 1441 LVVARQ-LDRELQSEFRLEIRALDTSASNNPQSSAITVKIEVADVNDNAPTWPH-DPIEL 1498

Query: 62   QAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVS---NTGLHK----FRIDPRSGVIE 111
            +  E+      I    ATD D G N E+ Y +   +   N  L K    F +D  +G + 
Sbjct: 1499 EVSESLMVGSIIYNFTATDADSGTNGELQYRLLRYTPQLNETLEKTTPIFAMDSLTGSLS 1558

Query: 112  TTGKLI--AGEQYSITVQATD 130
                L   + ++Y + VQA D
Sbjct: 1559 LQAPLDYESLKEYLLIVQALD 1579



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEAR 67
            LDR+  +  ++   V+A +    AA     + V + D NDN P+ L      +I+    R
Sbjct: 1115 LDRESRD--RYELTVLATDNGTPAAHARARVLVRVLDSNDNDPKFLRESYAFKIEENLRR 1172

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  ATD DLG NA I YS+   +++    F++ P +G I T   L     E Y +
Sbjct: 1173 GAVVGVVSATDADLGENAAIRYSLLPANSS----FQVHPVTGEISTREPLDRELRELYDL 1228

Query: 125  TVQATDTG--GKSSQTIVEVSV 144
             V+A D G   +S++  V V+V
Sbjct: 1229 VVEARDQGTPTRSARAPVRVTV 1250



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 13/171 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVK 72
            P + R  ++AR  +    S    L V L D NDN+P+      +   A E   +   + +
Sbjct: 2300 PHELRLVMVARTTEPPFLSSYAELIVELEDENDNSPQFSQRQFVAT-AWEGNSKGTFVAQ 2358

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQAT 129
            ++A D D   N+ + Y I  V     + F I+P  SG++ T   L     + YS+ + AT
Sbjct: 2359 VQAFDADENANSRMRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDVYSLKIIAT 2416

Query: 130  DTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    +  + + V +V   N   P F  +   V+VSE   + + +A+++
Sbjct: 2417 DEGVPQMTGTSTIRVHIV-DVNDNQPTFPPSNV-VSVSEATELGAVIASVS 2465



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 258 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGSS---VLQVYASDTDADENGLVEYAIN 314

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRID R+G +     L     E + + V A D G +  +T   VS+ V   
Sbjct: 315 RRQSDKEQMFRIDARTGAVYINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 374

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F        +SE A     VA I+V
Sbjct: 375 NDNQPTINVIFLSEDASPKISESAQPGEFVARISV 409


>gi|345311060|ref|XP_001510399.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-20 [Ornithorhynchus
           anatinus]
          Length = 795

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 18/187 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           + + + LDR+       R Q + R + G          + + DINDN PR P  P +   
Sbjct: 109 IHATQRLDREERPQYTLRAQALDR-RTGRPMEPESEFVIKIQDINDNEPRFPDGPYVATV 167

Query: 63  A-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           A     G +  Q+   +A D   G +A + YSI      G   F +D ++G+I T    +
Sbjct: 168 AEMSPVGTSVIQVTATDADDPSYGSSARVVYSILQ----GQPYFSVDSKTGLIRTALMNM 223

Query: 118 ---AGEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E Y + +QA D GG+    +    V +S+    N   P F Q  Y ++VSE A +
Sbjct: 224 DREAKESYEVIIQAKDMGGQLGGLAGTATVNISLS-DVNDNPPRFPQKHYQMSVSESAPV 282

Query: 171 NSTVATI 177
           +STV  +
Sbjct: 283 SSTVGRV 289



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 31/195 (15%)

Query: 8   NLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQA 63
           N+DR+     K  ++VI  A++  G    +  + TVN  L+D+NDN PR P     Q+  
Sbjct: 222 NMDRE----AKESYEVIIQAKDMGGQLGGLAGTATVNISLSDVNDNPPRFPQ-KHYQMSV 276

Query: 64  GEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKL 116
            E+      + ++ A D D G+NAE+TYS+  +   GL  F I    D + G+I     L
Sbjct: 277 SESAPVSSTVGRVFAKDPDEGINAEMTYSL--LEGDGLDAFDISTDPDFQVGIITVRKPL 334

Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS-----------PVFQQNTYDVNVS 165
               + S T++    G      +  +S+ P  +T +           PVF+  TY V V 
Sbjct: 335 SFETKRSYTLKVE--GANRHSELRFLSLGPFQDTATVHISVEDVDEPPVFELGTYFVEVP 392

Query: 166 EGASINSTVATITVS 180
           E   I +TV T++ +
Sbjct: 393 EDVEIGATVRTLSAA 407


>gi|195035609|ref|XP_001989268.1| GH10145 [Drosophila grimshawi]
 gi|193905268|gb|EDW04135.1| GH10145 [Drosophila grimshawi]
          Length = 3061

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 16/186 (8%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P+        + G 
Sbjct: 1714 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPLGVYFGNVTENGT 1773

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D      NA + YSI        TG   F I+P +G I+T    +  
Sbjct: 1774 AGSPVMTMSAIDYDDPNESTNARLIYSIEKNVIEEETGAPIFEIEPETGHIKTAVCCLDR 1833

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ + G  I  T 
Sbjct: 1834 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWFTEVDETNGTYIPETP 1892

Query: 174  VATITV 179
            + T+TV
Sbjct: 1893 ILTVTV 1898



 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI--- 90
            ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I Y +   
Sbjct: 1628 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFLTGQ 1687

Query: 91   -YHVSNTGLHKFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVEVSV 144
                 NT   KF I+  +G I     L   +     Q+  TV A D GG+      ++ V
Sbjct: 1688 GIDPDNTANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQV 1747

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +   N  +P F    Y  NV+E  +  S V T++
Sbjct: 1748 NLKDINDNAPQFPLGVYFGNVTENGTAGSPVMTMS 1782



 Score = 41.6 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 12   DPPNPGKFRFQVIAREK-----QGTAASVPVS---LTVNLNDINDNAPRLPMIPPIQIQA 63
            DP     FRF++   +K      G +    V+   + V L DINDN PR      I++  
Sbjct: 1944 DPLQSSGFRFRIQVNDKGEDGTDGASDKYHVAYSWVVVKLRDINDNVPRFER-DHIEVSI 2002

Query: 64   GEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAG 119
             E  +    + +  ATD D G +++++YSI   SN    +F I  +  + I+        
Sbjct: 2003 YEDTKVGTILEQFRATDADQGGHSQVSYSIIRDSNR-RRQFAISEKGAISIQRPLDRETE 2061

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
            +++++ + A+D G  S      ++V V   N  +P   Q+
Sbjct: 2062 DRHNVQIIASDDGNPSRTATATLTVIVKDVNDNAPTLAQD 2101



 Score = 36.6 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 29/175 (16%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +  +   Q+IA +    + +   +LTV + D+NDNAP L       +    + R
Sbjct: 2056 LDRETED--RHNVQIIASDDGNPSRTATATLTVIVKDVNDNAPTLAQDYRPTLPENVSPR 2113

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            +I+++ A D D               N G   F +DP +     + ++ AG +       
Sbjct: 2114 KIIEVAAKDAD----------DRQRGNGGPFSFHLDPLA-----SDEIRAGFKVEY---- 2154

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS---EGASINSTVATITVS 180
             D  G +   +  +S +  P  R    QQ +YD+ +     GA   +  +T+TV+
Sbjct: 2155 -DRRGDNGNGVAIISSLR-PFDRE---QQKSYDIPIEIKDNGAPAMTGTSTLTVT 2204


>gi|395546174|ref|XP_003774966.1| PREDICTED: protocadherin-19 [Sarcophilus harrisii]
          Length = 968

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 14/194 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV K NLDR+     ++ +++ A +         V L + + D NDN P  P  P   +
Sbjct: 182 LVVEK-NLDRE--TQARYNYRITALDGGDPPRMGTVGLAIKVIDSNDNNPVFPE-PTYSV 237

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
              E       ++++ A+D D G N E+ YS Y  V+      F+IDP SG+I  +G + 
Sbjct: 238 SVPENAPLNTPVLRLNASDPDEGTNGEVVYSFYGFVNEKARGLFQIDPHSGLISVSGAID 297

Query: 118 --AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV---FQQNTYDVNVSEGASIN 171
              G  Y + VQA D G  S     +V+V V   N  +PV      N+  V VSE A   
Sbjct: 298 YEQGRVYELDVQAKDLGPNSIPAHCKVTVNVLDVNDNAPVINLLSVNSELVEVSESAPPG 357

Query: 172 STVATITVSRLASG 185
             +A + VS   SG
Sbjct: 358 YVIALVRVSDRDSG 371



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 11/187 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V+K+ +DRD       +  VI+ E   ++  + V + V + D+NDN P  P    I++
Sbjct: 72  LLVTKQKIDRDLLCHQSPKC-VISLEVMSSSMEICV-VKVEIKDLNDNTPSFPS-SQIEL 128

Query: 62  QAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG---VIETTG 114
           +  E      +I    A D D G     TY I      GL  K R D       V+E   
Sbjct: 129 EISETASPGTRIPLDGAYDPDSGSFGVQTYEITPNDLFGLEVKTRGDGSRFAELVVEKNL 188

Query: 115 KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                 +Y+  + A D G       V +++ V   N  +PVF + TY V+V E A +N+ 
Sbjct: 189 DRETQARYNYRITALDGGDPPRMGTVGLAIKVIDSNDNNPVFPEPTYSVSVPENAPLNTP 248

Query: 174 VATITVS 180
           V  +  S
Sbjct: 249 VLRLNAS 255



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 17/186 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQI 70
           F F+V+A++    +     ++ V + D+NDN P +   PP+     E            +
Sbjct: 521 FEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVI-TAPPLVNGTAEVYIPRNAGVGYLV 579

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
             ++A D D G N  +TY +    + G   F ID  +G I TT     G +  Y + V A
Sbjct: 580 TVVKADDYDEGENGRVTYDMTE-GDRGF--FVIDQANGEIRTTRTFGDGSKTTYELIVVA 636

Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            D G    S+  +V + + P  + +  V   N   + +    SI + +  +T+  +A  C
Sbjct: 637 HDHGKTSLSASALVLIYLSPALDAQESVGSVNLSLIFIIALGSI-AAILFVTMIFVAVKC 695

Query: 187 AIMNKE 192
              NKE
Sbjct: 696 KRDNKE 701


>gi|109079045|ref|XP_001091651.1| PREDICTED: protocadherin beta-13-like isoform 1 [Macaca mulatta]
          Length = 798

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDREAE--AELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G IE   +L   
Sbjct: 252 ISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y ++++  LDR+  + G++   +   +         +++TV + D+NDNAP         
Sbjct: 401 YTLLTERPLDRE--SRGEYNITITVTDLGTPMLKTQLNITVLVADVNDNAPAFTQTSYTL 458

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIY-----HVSNTGLHKFRIDPRSGVIETT 113
              +       I  + ATD D G NA++TYS+      H+S T L     D        +
Sbjct: 459 FVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDAHLSLTSLVSINADNGHLFALRS 518

Query: 114 GKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
               A + +   V A+D G    SS+ +V V V+   N  SP 
Sbjct: 519 LDYEALQGFEFRVGASDRGSPALSSEALVRVLVLDA-NDNSPF 560


>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
          Length = 4589

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 13/148 (8%)

Query: 38   SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ DINDN P           P  I  G    +++++ A   D+ VNAEITY+I  
Sbjct: 3216 TVIVSVLDINDNPPVFEYREYGATVPEDILVG---TEVLQVYAASRDIEVNAEITYAI-- 3270

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            +S     KF ID  +G I     L   +  +Y +TV+ATD G  S   +  V++ V   N
Sbjct: 3271 ISGNEHGKFSIDSTTGAIFIIDNLDYESSHEYYLTVEATDGGTPSLNDVAAVNINVTDIN 3330

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +PVF Q+TY   +SE A +  +V T+
Sbjct: 3331 DNTPVFSQDTYTAVISEDAVLEQSVVTV 3358



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+         +++A++  G  A    ++ V L D NDNAP+          
Sbjct: 2549 IFTSEKLDRETAGEKVIAIRLMAKDTGGKVAFC--TINVILTDDNDNAPQFRATKYKVTI 2606

Query: 63   AGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
              +A +   ++K+ A+D D G NA+I YSI   S +      I+   G+I T   L+  E
Sbjct: 2607 GSDAPKGTSVIKVLASDADEGSNADIMYSIEADSESVQENLEINKLFGIITTKESLVGLE 2666

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               ++  V+A D G  S +++V V V +  P T  P F +  Y   VSE   I + +  I
Sbjct: 2667 NEIFTFFVRAVDGGSPSKESVVPVYVKILPPETPLPKFSEPFYTYTVSEDLPIGTEIDVI 2726

Query: 178  TV 179
             V
Sbjct: 2727 RV 2728



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            VN++D+ND+AP        Q +  E+      ++++ A D D G NAE+ YSI    N G
Sbjct: 1551 VNVSDMNDHAPWFTS-SSYQGRVYESAAVGSVVLQVTALDKDKGENAEVLYSI-ESGNIG 1608

Query: 98   LHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
             + F IDP  G I+T  +L     E+Y + V+ATD G      I  V + V   +   P 
Sbjct: 1609 -NSFTIDPILGSIKTAKELDHSNQEEYDLMVKATDRGNPPMSEITSVHIFVTISDNAIPR 1667

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLAS 184
            F    Y   +SE ASI S +  I+    +S
Sbjct: 1668 FTSKEYSTEISEAASIGSFIGIISAHSQSS 1697



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LDR+      +   V A ++     S    + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETAEKLDRE--TVSHYWLTVFATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1149 VMENSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQNEHILEVTVTDDGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1257



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQ 62
            ++NLD +      ++F V+A+     +  V  V +++ + D NDN+P L   P     ++
Sbjct: 2764 EKNLDHE--TMKWYQFSVVAQSTHEDSEVVSSVDISIQVKDANDNSPILESNPYEAFIVE 2821

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLI--AG 119
                  ++++++ATD D G N +I YS+    +   +  F ID  +G I T  +L     
Sbjct: 2822 NLPGGSKVIQVKATDLDSGTNGQILYSLDQSQSLDVIESFAIDMETGWITTLKELDHEKR 2881

Query: 120  EQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++Y ITV A+D G K   SS  +VE+SV    N   P F    Y   VSE
Sbjct: 2882 DKYHITVIASDYGEKVQLSSTAVVEISVT-DVNDNPPRFTAEIYKGTVSE 2930



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+     K  + +      GT +S  + + V + D NDN+P         
Sbjct: 2977 WKVYVKKPLDRE----KKDNYLLTITATDGTFSSKAI-VEVKVLDANDNSPICEKSAYSD 3031

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + I+++ ATD D+  NAEITY++   S  G  KF+++  +G ++T  
Sbjct: 3032 TIPEDTVPG----KLIMQVSATDADIRSNAEITYTL---SGPGAEKFKLNADTGELKTFA 3084

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   +Q  Y++ V+ATD GG+  Q  V V  +   N  +P F  + Y + V E
Sbjct: 3085 PLDREQQAVYNLLVKATDGGGRFCQMSV-VFTLEDVNDNAPEFSADPYAITVFE 3137



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 17/158 (10%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  I ++ ATD D G NAEI+YSI 
Sbjct: 1234 VKILDENDNKPQFLQKFYKIRLPERDKPERERSAKREPIYRVIATDKDEGPNAEISYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-TVQATDTG--GKSSQTIVEVSVV--P 146
                 G  KF I+P++GV+ ++ K     +Y I +++A D G   KSS   + +  +  P
Sbjct: 1294 DGDEHG--KFFIEPKTGVV-SSKKFSGAREYDILSIKAVDNGRPQKSSTARLHIEWISKP 1350

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             P+     F++  +   V E   +   +  I+V  L +
Sbjct: 1351 KPSPEPISFEEPYFSFTVMESDPVAHMIGVISVEPLGT 1388



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
            + ++ +   G      +S+   L D+NDNAP     P      +  E +  + +++ATD 
Sbjct: 3094 YNLLVKATDGGGRFCQMSVVFTLEDVNDNAPEFSADPYAITVFENTEPKTPLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D G+N +I YS+    N+   +F ID  SG+I     L    Q  Y++ ++A D G    
Sbjct: 3154 DAGLNHKIAYSLV---NSADGQFSIDESSGIIRLEKPLDRELQAVYNLILKAVDHGVPRR 3210

Query: 137  QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             T    V VSV+   N   PVF+   Y   V E   + + V  +
Sbjct: 3211 LTATGTVIVSVL-DINDNPPVFEYREYGATVPEDILVGTEVLQV 3253



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN P+   IP    ++  E   +   I+ +EA D D G ++++ YS+  
Sbjct: 912  VLLKVSLEDVNDNPPKF--IPSNFLVKVREDLPEGTIIMWLEAYDPDFGQSSQVRYSLI- 968

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG I    +L   ++  Y++T++A D G     SS   VEV ++  
Sbjct: 969  --DNGDGNFDVDKLSGAIRIVQQLDFEKKQVYNLTIKARDKGKPISLSSTCYVEVEIIDV 1026

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   P+F        V E   I ++V T++     +G
Sbjct: 1027 NENLHPPLFSSFVDKALVKEDVPIGTSVMTVSAHDEDTG 1065



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     I+  E R    +I++IEATD DLG+N E+ Y  Y +++
Sbjct: 809 LDIRVLDANDNKPEF-LQDNYFIEVSENRELNSEIIQIEATDKDLGLNGEVKY--YLLTD 865

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +G+++  G L   +Q  + + ++A D      Q    V +   +   N 
Sbjct: 866 TD--KFSIDSETGIVKVVGPLDREKQHVHFLKIEARDQADMEPQLFSTVLLKVSLEDVND 923

Query: 151 RSPVFQQNTYDVNVSE 166
             P F  + + V V E
Sbjct: 924 NPPKFIPSNFLVKVRE 939



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA 66
            +LD +  +   F  QV         A    ++T+++ DIND  P    M+    +     
Sbjct: 1835 SLDYEEAHIFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKMLYESSVLVPTY 1894

Query: 67   RR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
            +  +++ + ATD D    +++ YSI    N G  KF IDP++G I          +Y +T
Sbjct: 1895 KGVKVITVNATDADSVAFSQLMYSIPE-GNIG-EKFLIDPKTGTITVQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V+A+D G  +S T V+++V     ++   F QN+Y   V E ++   T+A IT
Sbjct: 1953 VRASD-GKFTSHTSVKINVKESKESQLK-FTQNSYSAIVKENSTEARTIAVIT 2003



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQ-YSIT 125
            + +++ATD D G+  +ITY I  V++    +F I+ R G I T+ KL    AGE+  +I 
Sbjct: 2512 VFEVKATDEDSGIYGQITYHI--VNDFAKDRFYINER-GQIFTSEKLDRETAGEKVIAIR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A DTGGK +   + V ++   N  +P F+   Y V +   A   ++V  +  S    G
Sbjct: 2569 LMAKDTGGKVAFCTINV-ILTDDNDNAPQFRATKYKVTIGSDAPKGTSVIKVLASDADEG 2627



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 10/152 (6%)

Query: 39   LTVNLNDINDNAPRLPMI---PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +TV++ D+NDN P    +     I  QA      +  ++A D D     ++ YSI  +S 
Sbjct: 2377 VTVDVTDLNDNPPLFDQLLYEAKISEQAPHGHF-VTCVKAYDADSSDIDKLEYSI--LSG 2433

Query: 96   TGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                 F ID ++G+I  +   +      Y++ V  +D   +SS  I E+ V+   N  SP
Sbjct: 2434 NEHKNFAIDSKTGIITLSNLRRQTLKPFYNMNVSVSDGVFRSSAHI-EIIVIQA-NLHSP 2491

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +F QN Y+V ++E A + + V  +  +   SG
Sbjct: 2492 IFMQNEYEVELAENAPLQTLVFEVKATDEDSG 2523



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 21/145 (14%)

Query: 43   LNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTG 97
            + D NDNAP    LP    +++ A E    I  + A D D+G N E+ Y +  +H     
Sbjct: 2072 IEDQNDNAPVFVNLPYYAVVKVDA-EVGHIIRCVTAVDRDIGRNGEVHYYLKEHH----- 2125

Query: 98   LHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
               F+I P SG I    K       ++Y IT+ A D G    S++ IV ++V+   N   
Sbjct: 2126 -EHFQIGP-SGEISLKKKFEPDTLNKEYLITIVAKDGGDPAFSAEVIVPITVM---NKAM 2180

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF++  Y   + E   ++S V  +
Sbjct: 2181 PVFEKAFYSAEIPENIQLHSPVVHV 2205



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI  T K +  E    Y++ VQAT+  G S+ T V V +    N   PVF Q
Sbjct: 1711 FDINPNSGVI-ITQKTLDFETLPFYTLIVQATNMAGLSANTTVWVHL-QDENDNVPVFMQ 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1769 AEYTGLISESASINSVVLT 1787



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 9/145 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            G  A V V + V   D+NDN P            +A      +V++ ATD+D   N  I+
Sbjct: 2263 GVHAEVFVDIIVE--DVNDNPPVFAQQSYTTTLSEATVIGMSVVQVHATDSDSVPNRGIS 2320

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVS 143
            Y ++         F ID  SG+I     L   E  ++ + V+A D+G    SS  IV V 
Sbjct: 2321 YHLFENQTKSPDHFHIDGSSGLISLVRSLDYEEIQEHKLLVRAVDSGMPPLSSDMIVTVD 2380

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA 168
            V    N   P+F Q  Y+  +SE A
Sbjct: 2381 VT-DLNDNPPLFDQLLYEAKISEQA 2404



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 17/171 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIV 71
            K  + +      GT A +   + + + D ND+ P+        +IP   +   E    I+
Sbjct: 1423 KSNYNLTVEATDGTTAII-TQVLIKVIDTNDHRPQFSKSKYEVLIPEDTVPDTE----IL 1477

Query: 72   KIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            +I ATD D     ++ Y++   ++   L KFR+DP +G + TT KL      Q+ +TV  
Sbjct: 1478 QISATDKD--EKNKLIYTLQSSTDPLSLKKFRLDPATGSLYTTEKLDHETAHQHILTVMV 1535

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             D      ++   V V V   N  +P F  ++Y   V E A++ S V  +T
Sbjct: 1536 RDQDVPVKRSFARVIVNVSDMNDHAPWFTSSSYQGRVYESAAVGSVVLQVT 1586



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           IN + P+     P  I+  E       I+ + ATD D G N ++ YSI   ++     F 
Sbjct: 710 INVHVPQFRSSLPTSIEVKENYPVGSNIILMNATDLDSGFNGKLVYSISGGNDDSC--FI 767

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
           ID  +G+++    L     E+Y++ +   D G   K++  ++++ V+   N   P F Q+
Sbjct: 768 IDLETGMLKVLSPLDRETTEKYTLNITVYDLGIPQKAAWCLLDIRVLDA-NDNKPEFLQD 826

Query: 159 TYDVNVSEGASINSTVATI 177
            Y + VSE   +NS +  I
Sbjct: 827 NYFIEVSENRELNSEIIQI 845



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SGV+  TG+L   E   Y +
Sbjct: 166 RTSIARVSATDADIGTNGEFYYSFKERTDM----FAIHPTSGVVVLTGRLDYAETKLYEM 221

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 222 EILAVDRGMK 231



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
            ++ + A D D G + EI +SI   S  G+  F+ID   GVIET  KL       Y +TV 
Sbjct: 1054 VMTVSAHDEDTGRDGEIHFSIRGGSGIGI--FKIDEEKGVIETAEKLDRETVSHYWLTVF 1111

Query: 128  ATDTG----GKSSQTIVEVSVV--PGPNTRSPVF 155
            ATD G       ++  +EV  V    P T  PV+
Sbjct: 1112 ATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVY 1145


>gi|194382270|dbj|BAG58890.1| unnamed protein product [Homo sapiens]
          Length = 802

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDN P     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNPPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S      F+I+P +G IE   +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D G  S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|312377967|gb|EFR24666.1| hypothetical protein AND_10582 [Anopheles darlingi]
          Length = 3660

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 15/140 (10%)

Query: 38   SLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            +L +N+ DINDN P          +P I     E    I+K+ AT  D G+NAEI+YSI 
Sbjct: 2047 TLIINVQDINDNPPEFTSKHYFASVPEINSIGSE----ILKVLATSKDTGINAEISYSI- 2101

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
             +      KF I+ R+GV+     L       Y +T+QA D G      +  V++ V   
Sbjct: 2102 -IGGNEHRKFAINNRTGVLSLADTLDYERARDYFLTIQAVDGGTPPLSNLATVNISVTDS 2160

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N   P F QN+Y+  + E A
Sbjct: 2161 NDNHPQFTQNSYNARIREDA 2180



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI-QAGEA 66
            LDR+          V  R+  G   S  + LT  L D+NDN P   M P  + + +  E 
Sbjct: 1916 LDRESQARYSLMAHVQDRDHPGWECSSQIELT--LTDLNDNPPDFSMNPYSVTLPEDAEV 1973

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               + KI ATD D+G+N +I YS     ++    FRI P SG++ T  K +  E    Y+
Sbjct: 1974 GTLVTKIHATDADIGINRKIKYSFL---DSYRDHFRIAPESGIV-TLAKPLDRELKAVYN 2029

Query: 124  ITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            ++V ATD G      ++  I+ V  +   N   P F    Y  +V E  SI S +  +  
Sbjct: 2030 LSVSATDLGNPPLSNAATLIINVQDI---NDNPPEFTSKHYFASVPEINSIGSEILKVLA 2086

Query: 180  SRLASG 185
            +   +G
Sbjct: 2087 TSKDTG 2092



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G +A VPVS+ V   D+ND  P +       I   E       I+K++A DND G+N  I
Sbjct: 1104 GVSAEVPVSVLVQ--DVNDCPPEIEQ-DSYNITVSERAPFGTAILKVQAKDNDTGINQVI 1160

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV 144
             Y++   S      F +DP  GVI     L       +  TV A+D G  S  +   V V
Sbjct: 1161 NYALQTDSKNTSEHFHMDPNDGVIYLKKSLDHETLSHHHFTVVASDKGVPSLSSTAHVWV 1220

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N   P F+Q +Y   +SE A+    V  ++ S
Sbjct: 1221 SVMDMNDNPPKFEQPSYSCVLSEHATRGQFVTVVSAS 1257



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 8/147 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           +V  + LDR+  +  +    VI +++   A     ++ + ++D ND+AP     ++    
Sbjct: 275 IVMAQRLDRETQD--EHVLIVIVKDQGTPAKRNYATVVITVHDHNDHAPEFTTKIVQGKV 332

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IA 118
            +      ++ ++ A D D+G NA ITYSI    N G + F IDP  GVI    +L   A
Sbjct: 333 FETAPVGTRVAQVYAIDRDIGENARITYSI-GSGNIG-NVFTIDPTMGVISVAKQLDISA 390

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSVV 145
             +Y + V+ATD G  +  + + V VV
Sbjct: 391 IAEYVLHVRATDAGKPALSSQIAVHVV 417



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
            A R +  ++ATD D G    + YSI  +S+     F ID   G + T  KL   A   Y 
Sbjct: 1350 AGRLVTTVKATDKDFGEYGRVAYSI--ISDDMQEHFAIDKERGELVTKKKLDREARAAYE 1407

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + + A D GGK+    V +  +   N   P FQ   Y   +    ++N+T   +
Sbjct: 1408 VPIMAVDAGGKAGFCTVRIR-IGDENDNQPAFQYREYKTLIQGNLTVNTTFYRV 1460



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 22/172 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGEARRQI 70
           F  +V    K    + +   + +N+ D+ND AP           ++P        A   +
Sbjct: 630 FHVKVTDLGKPRLTSELTAEVRINITDVNDCAPAFTQSEYNVTLLLPTY------ANVAV 683

Query: 71  VKIEATDNDLGV--NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
           +++ ATD D     N+ + Y I   +  G+  F ID RSGVI T      G  Y + V+ 
Sbjct: 684 LQLNATDEDSSSTENSTLRYDIIEGNRDGV--FAIDARSGVITTRDVESIGTAYRLAVRV 741

Query: 129 TDTGGKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +D  GK ++   V ++V    N+   +FQ+  Y+ ++ E ++  STVA + V
Sbjct: 742 SD--GKFAKVAQVNINVETSENS-GLIFQRQIYEGSIMENSTKISTVAVVNV 790



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++  K++LD +        F V+A +K   + S    + V++ D+NDN P+   P    +
Sbjct: 1183 VIYLKKSLDHE--TLSHHHFTVVASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSYSCV 1240

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +     + +  + A+D D   +  + Y+I          + IDP +G+I         
Sbjct: 1241 LSEHATRGQFVTVVSASDPDYIDHDRLVYTI--AQGNEQQTYGIDPVTGIITLVNMQNFA 1298

Query: 120  EQYSIT---VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   ++   V  TD G  +S T V+++++P  N   P F+  +YD  V+E       V T
Sbjct: 1299 EPRHVSVLNVSVTD-GVYTSFTRVKITILPA-NLHHPEFEHQSYDAKVNENQLAGRLVTT 1356

Query: 177  I 177
            +
Sbjct: 1357 V 1357



 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
           G   R  + + ATD D+G N  ++YSI         KFRIDP +GVI          +Y 
Sbjct: 26  GYTIRTGMLVLATDKDIGENGRVSYSI-KPGRGKAKKFRIDPDTGVIYAARTFDVDTEYD 84

Query: 124 ITVQATDTGG-KSSQT 138
           + V+A D G  K SQT
Sbjct: 85  LLVRAEDHGEPKRSQT 100



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 11/180 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V+K+ LDR+      +   ++A +  G A    V   + + D NDN P         + 
Sbjct: 1392 LVTKKKLDREAR--AAYEVPIMAVDAGGKAGFCTVR--IRIGDENDNQPAFQYREYKTLI 1447

Query: 63   AGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSG--VIETTGKLI 117
             G         ++ A D D   NA + YSI+   N+G+ + F +D  +G   ++ +   +
Sbjct: 1448 QGNLTVNTTFYRVRALDADENQNAVVKYSIFDSQNSGIRELFGVDENTGGLYLQKSAVQM 1507

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              + +   ++A D G  S  + V + + V       P+F++   ++ +SE +S+  TV T
Sbjct: 1508 ENQLFQFFIRAHDGGSPSLYSDVPIDIYVMSSAENPPLFEKKDRNLFLSE-SSLPGTVIT 1566



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F I+P +GVI T  +L       Y++TV+ T+    S+   V ++V+   N   P F+Q 
Sbjct: 471 FFINPSTGVITTKDQLDYEHTKFYNLTVKTTNMASASATCSVIINVL-DMNDNVPYFEQQ 529

Query: 159 TYDVNVSEGASINSTVATIT 178
            Y   VSE A I S V T++
Sbjct: 530 VYRGEVSEAAPIGSLVLTLS 549



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 16/162 (9%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATD 77
           R Q   REK   A    V + V + DINDN P    +P   + + +  R   I K+ A D
Sbjct: 841 RSQQPDREKPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVDDPRGSVITKVHALD 897

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--G 133
            D   N E+ Y +          F++D ++G + T  + + G    Y + + A D G   
Sbjct: 898 LDSFENGEVRYEMKRGHG---ELFKVDRKTGEV-TLKQTLEGHNRDYELLISAYDGGITP 953

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            S+   V V V+   +   PVF +  Y   V+E   ++S ++
Sbjct: 954 CSTDVTVHVKVI---DKSMPVFSKQFYSDMVAENIELHSPLS 992



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQAT 129
           I+A DND G+NA + Y I  +       F ID  +G I+T    +  E+   +S  V+ T
Sbjct: 579 IKAKDNDSGLNALLHYDI--LDMLPRRYFHIDSSTGAIKTI-MFLDHEKIPFFSFHVKVT 635

Query: 130 DTGGK--SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
           D G    +S+   EV + +   N  +P F Q+ Y+V +
Sbjct: 636 DLGKPRLTSELTAEVRINITDVNDCAPAFTQSEYNVTL 673


>gi|114050897|ref|NP_001004177.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 precursor
           [Mus musculus]
          Length = 2917

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q 
Sbjct: 240 VVTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQ 292

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETT 113
           +  E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T 
Sbjct: 293 EYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPRSGVIRTR 352

Query: 114 GKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E Y +TV+A+D G   G  S T +    V   N  +P F +  Y V V E  
Sbjct: 353 GPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDV 412

Query: 169 SINSTVATITVS 180
           +  + V  +T S
Sbjct: 413 TPGAPVLRVTAS 424



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 832

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 833 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 889

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 890 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 946



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DINDNAP   +  P Q    E+      ++ ++A D D G NA + YS+  V +
Sbjct: 491 VTVQVLDINDNAPIF-VSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAGVGH 549

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I    +L   E   YS  V+A D G  +      VSV +   N  +
Sbjct: 550 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 607

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F Q  Y V ++E A++ ++V T++
Sbjct: 608 PTFTQPEYTVRLNEDAAVGTSVVTVS 633



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 561 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYT 616

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 617 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 667

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 668 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 724

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 725 RPAGTTVVLISAT 737



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 731 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 786

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 787 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 845



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 872 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 929

Query: 57  ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 930 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 980

Query: 113 TGKLIAGE--QYSITVQAT 129
              L   +  +Y + +QAT
Sbjct: 981 LVDLDYEDRPEYVLVIQAT 999



 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S   
Sbjct: 387 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 443

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSVVPGPNTR 151
             +F +D ++G ++    L     ++Y++ ++A D GG+   +    +V V V+   N  
Sbjct: 444 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQD-GGRPPLSNVSGLVTVQVL-DINDN 501

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +P+F    +   V E   +   V  +
Sbjct: 502 APIFVSTPFQATVLESVPLGYLVLHV 527


>gi|291234311|ref|XP_002737092.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like,
           partial [Saccoglossus kowalevskii]
          Length = 1726

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 16/188 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-----QIQA 63
           LDR+  +   + FQ +A ++ G        + V+L DINDNAP  P  P          A
Sbjct: 253 LDRE--DQAYWFFQAVATDEGGAGLDGFADVIVSLIDINDNAPMFPNGPYTGSVLEHSPA 310

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
           G     +  ++  D + G NA  TY I  +    G   F ID  + VI T    +  E+ 
Sbjct: 311 GTTVMTMSAVDLDDPNEGDNAHCTYEIIENAEKDGEIIFAIDADTAVITTLVDWLDREKV 370

Query: 122 --YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             Y+I V+ATD GG   S+   +E+  +   N  +P F ++ Y   VSE   + ++V T+
Sbjct: 371 PVYNIVVEATDGGGLTGSATATIELDDI---NDNAPEFTEDRYFTTVSEALPVGASVLTV 427

Query: 178 TVSRLASG 185
           T   +  G
Sbjct: 428 TALDMDIG 435



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 14/167 (8%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDN 78
           + ++     G   +   + T+ L+DINDNAP            +A      ++ + A D 
Sbjct: 373 YNIVVEATDGGGLTGSATATIELDDINDNAPEFTEDRYFTTVSEALPVGASVLTVTALDM 432

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRS---GVIETTGKLIAGE----QYSITVQATDT 131
           D+GVNA++ Y I    N   H +  +  +   G+I+    L   +    ++++T++  D 
Sbjct: 433 DIGVNAQLDYRITE-GNEDNHFYMYNDVAENVGIIQIQEMLDYEDPTKREFTLTLKVCDP 491

Query: 132 G-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               +S+ ++ V      N   PVF  N Y  +V E AS+ +T+  +
Sbjct: 492 HYCNTSECLIRVDDF---NDNPPVFDPNMYRASVYENASMGTTLGIV 535



 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 43  LNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           ++D+NDNAP            +  E    I  + ATD D G N++I Y I   +  G+  
Sbjct: 75  VSDVNDNAPAFDSTEFYATVEEDRETGFAITTVTATDEDEGANSQIRYQITSGNLGGV-- 132

Query: 101 FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           FR+ P  G IE    L   +   Y++T  A+D  G +  T      V   N   PVF+++
Sbjct: 133 FRVVPEVGRIEIAAPLDYEQTRSYALTFVASD--GLNENTASVNVNVLNVNDNPPVFEED 190

Query: 159 TYDVNVSEGASINSTVATITVS 180
            Y+  ++E    N  V  ITV+
Sbjct: 191 QYEPFITE-EDENVPVYVITVT 211


>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
            porcellus]
          Length = 4579

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2549 IFTLEKLDRETPAEKVISIRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATKYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA++ Y+I   S +      I+  +GVI T   LI   
Sbjct: 2607 GSNAAKGTSVIKVFASDADEGSNADVIYAIEADSESVKENLEINKLTGVITTKESLIGLE 2666

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G    +++V V V +  P    P F +  Y   VSE   I + +  I
Sbjct: 2667 NEFFTFFVRAVDNGSPPKESVVPVYVKILPPERHLPKFSEPFYTYTVSEDMPIGTEIDLI 2726



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++ DINDN P           + +     +++++ A   D+  NAEITYSI  +S 
Sbjct: 3216 TVIVSVLDINDNPPVFEYREYGATVSEDVLIGTEVLQLYAASRDIEANAEITYSI--ISG 3273

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                KF ID ++G I     L   +  +Y +TV+ATD G  S   +V V++ V   N  +
Sbjct: 3274 NEHGKFSIDAKTGAIFIIENLDYESAHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNT 3333

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F Q+TY   +SE A +  +V T+
Sbjct: 3334 PAFSQDTYTAVISEDAVLEQSVITV 3358



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+     K  + +      GT +S  + + V + D NDN+P         
Sbjct: 2977 WKVYVKKPLDRE----KKDSYLLTITATDGTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3031

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + I+++ ATD D+  NAEITY++     +G  KFR++P +G ++T  
Sbjct: 3032 TIPEDALPG----KLIMQVSATDADIRSNAEITYTLL---GSGAEKFRLNPDTGELKTLA 3084

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3085 PLDREEQAVYNLLVKATDGGGRFCQASI-VLTLEDVNDNAPEFTADPYTITVFE 3137



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G       S+ + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3094 YNLLVKATDGGGRFCQASIVLTLEDVNDNAPEFTADPYTITVFENTEPGTLLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+   +N    +F I+  SG+I+    L   +Q  Y++T++A D G   +
Sbjct: 3154 DTGLNRKISYSLIDSANG---QFSINDISGIIQLEKPLDREQQAVYTLTLKAVDQGLPRR 3210

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             S T   +  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3211 LSATGTVIVSVLDINDNPPVFEYREYGATVSEDVLIGTEVLQL 3253



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++      ++++ A D D G NAE+ YSI    N 
Sbjct: 1549 IIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDKGKNAEVVYSI-ESGNI 1607

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L     E+Y + V+A D G    S  T V + V    N  S
Sbjct: 1608 G-NSFTIDPILGSIKTAKELDRSHQEEYDLMVKAADKGNPPMSEMTSVHIFVTIADNA-S 1665

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F    Y + +SE  SI S V  +T
Sbjct: 1666 PKFTSREYSIEISETISIGSFVGIVT 1691



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1234 VKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  +F I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1294 EGNEHG--RFFIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1351

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P      F+++ +   V E   +   +  I+V
Sbjct: 1352 PPPEPISFEESVFTFTVMESDPVAHMIGVISV 1383



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1091 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1148

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  
Sbjct: 1149 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRRLDR 1206

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1207 EQQDEHILEVTVTDNGTPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1257



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S  V++ +N+ DINDN P         + + +A
Sbjct: 3292 ENLDYESAH--EYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPAFSQDTYTAVISEDA 3349

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D  + + I YSI   +  G   F IDP  G ++ T KL+  E    
Sbjct: 3350 VLEQSVITVMADDADGPLYSLIHYSIIEGNQGG--PFTIDPVKGEVKVT-KLLDRETISG 3406

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++T+QA+D G         V++ V   N  +P+F +  Y V + E   +  +V  + V+
Sbjct: 3407 YTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPLFSKGNYSVIIQENKPVGFSVLQLVVT 3466



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q         A      +V++ ATD+D  
Sbjct: 2262 TGAHAEVFVDIIVEDINDN-------PPVFVQQSYSATLSEASVIGTSVVQVRATDSDSE 2314

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D G    SS 
Sbjct: 2315 PNRGISYQMFGNHSKSHDHFHIDSTTGLISLLRTLDYEQFQQHKIFVRAIDGGMPPLSSD 2374

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             IV V V    N   P+F Q  Y+  +SE A
Sbjct: 2375 VIVTVDVT-DLNDNPPLFDQQIYEAKISEHA 2404



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 12/158 (7%)

Query: 19   FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR  Q      ASV VS+ V   D NDN+P L   P     ++      ++++I
Sbjct: 2775 YQFSILARCTQDDYEVVASVDVSIQVK--DANDNSPVLESNPYEAFIVENLPGGSRVIQI 2832

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G+N  + YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2833 RASDLDSGLNGHVMYSLDQSQSVDIIESFAINAETGWITTLKELDHEERDNYQIKVVASD 2892

Query: 131  TGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   S T V    V   N   P F    Y   VSE
Sbjct: 2893 HGEKVQLSSTAVVDVTVTDVNDSPPRFTAEIYKGTVSE 2930



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I         V  ++A D D      + YSI  +S
Sbjct: 2375 VIVTVDVTDLNDNPPLFDQQIYEAKISEHAIHGHFVTCVKAYDADSSDIDRLEYSI--LS 2432

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+ +  +D   +SS  +    VV G N  S
Sbjct: 2433 GNDHKNFVIDSETGIITLSNLRRHTLKPFYSLNISVSDGVFRSSAQVH--VVVIGGNLHS 2490

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2491 PVFPQNEYEVELAENAPVHTLVIEVKATDRDSG 2523



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A D D G + EI YSI   S  G+  F+ID  +GVIET+ +L   +   Y +TV 
Sbjct: 1054 VMTVSARDEDTGRDGEIRYSIRDGSGVGV--FKIDEETGVIETSDRLDRESTSHYWLTVY 1111

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
            ATD G     + +E+ +         P T  PV+
Sbjct: 1112 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1145



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 15/180 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
            LDR+  +    + +   + K+       V L V+L D+NDN P+   IPP  +++  E  
Sbjct: 884  LDREVQHVHYLKIEARDQAKEELQLFSTVLLKVSLEDVNDNPPKF--IPPNYRVKVREDL 941

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+ +EA D D+G ++++ YS+    + G   F +D  SG +    +L    +  Y
Sbjct: 942  PEGTIIMWLEAYDPDVGQSSQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFERKQVY 998

Query: 123  SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++TV+A D G      S+  +    V    N  +PVF        V E   I S+V T++
Sbjct: 999  NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHTPVFSSFVEKGIVKEDVPIGSSVMTVS 1058



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+   ITY+I  V++    +F  + R G I T  KL     A +  SI 
Sbjct: 2512 VIEVKATDRDSGIYGHITYNI--VNDFAKDRFYPNER-GQIFTLEKLDRETPAEKVISIR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2569 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKYEVNIGSNAAKGTSVIKVFASDADEG 2627



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 809 LDIVILDANDNPPEF-LQESYFVEVSEDKEINSEIIQVEATDKDLGSNGHVTYSIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +GV++    L    Q  + + ++A D   +  Q    V +   +   N 
Sbjct: 864 TDTDKFSIDSITGVVKVVHPLDREVQHVHYLKIEARDQAKEELQLFSTVLLKVSLEDVND 923

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 924 NPPKFIPPNYRVKVRE 939



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           ++   ++ T A     + V + D ND  P   P    + +    A R  I K+ ATD D+
Sbjct: 120 IVKAVEKNTNAEARTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIAKVSATDADI 179

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
           G N E  YS    ++     F I P SG +  TG+L  +  + Y + + A D G K
Sbjct: 180 GTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYMETQLYELEILAVDRGMK 231



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G + T  KL   A  Q+
Sbjct: 1475 EILQIRAVDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGSLSTCEKLDHEAVHQH 1529

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1530 ILTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1586



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E +     ++ + ATD D G N ++ Y+I   +      
Sbjct: 708 HSVNAHAPQFRNTLPGGIEVKENQPVGSNVIFMNATDLDSGFNGKLVYAISGGNEDSC-- 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++++ V+   N   P F 
Sbjct: 766 FIIDMETGMLKILSPLDRETTDKYTLNMTVYDLGIPQKAAWRLLDI-VILDANDNPPEFL 824

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q +Y V VSE   INS +  +
Sbjct: 825 QESYFVEVSEDKEINSEIIQV 845



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 17/141 (12%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +    +     F
Sbjct: 2074 DQNDNAPVFINLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHHD----HF 2128

Query: 102  RIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +I P +G I    +       ++Y +TV A D G    S++ IV ++V+   N   PVF+
Sbjct: 2129 QIGP-AGEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPVFE 2184

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +  Y   + E   ++S V  I
Sbjct: 2185 KPFYSAEIPENIQVHSPVVHI 2205



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG +  T K +  E    Y++ +Q T+  G S+ T + V +    N   PVF Q
Sbjct: 1711 FDINPHSGTV-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTMLVHL-QDENDNVPVFMQ 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1769 AEYSGLISESASINSVVLT 1787



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1835 SLDYEETSVFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLYEASLLLPTY 1894

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1895 KGVKVITVNATDADSSAFSQLMYSITE-GNIG-EKFFMDYKTGTITIQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +S T V+++V     ++   F Q+ Y   V E ++  +T+A IT
Sbjct: 1953 IRASD-GRFASFTSVKINVKESKESQLK-FTQDFYSAVVKENSTEATTLAVIT 2003


>gi|410900464|ref|XP_003963716.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Takifugu rubripes]
          Length = 3370

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 21/189 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            ++ S   LDR+    G +  ++IA +      +   +LTV + D+ND  P   P +  + 
Sbjct: 951  VLTSTSVLDRE--QIGLYHLRIIAYDAGKFPRTSTSTLTVKVLDVNDETPTFNPRLYNVS 1008

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++    R  IV ++  +DND G+NAE++Y I   +  G  KF +  R G++ T  +L   
Sbjct: 1009 LKESVPRDHIVSRLACSDNDAGLNAELSYFITGGNQDG--KFSVGFRDGIVRTVVRLDRE 1066

Query: 120  EQ--YSITVQATDTGGKSSQ------TIVEVSVVPGPNTRSPVFQQNTYDVNVSE----G 167
             Q  Y++ V+A D G   S+        VEV  V   N   P+F QN+Y+  + E    G
Sbjct: 1067 TQAAYTLIVEAIDNGPAGSRRTGTATVFVEVQDV---NDNRPIFLQNSYETGILESVPQG 1123

Query: 168  ASINSTVAT 176
             SI    AT
Sbjct: 1124 TSILQVQAT 1132



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 13/157 (8%)

Query: 38   SLTVNLNDINDNAPRLPMI--PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+ND  P  P     P ++  G+   ++  + A+D D G+N ++ YSI     
Sbjct: 1734 TVLVNVLDVNDVTPSFPRTYEGPFEVTEGQPGPRVWTLRASDEDSGLNGKVEYSI----T 1789

Query: 96   TGLHK--FRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-VPGP 148
             G H+  F I P  G +     +    +    Y+ITV A D G  S  + V V V V   
Sbjct: 1790 GGDHQNEFMISPVEGELRVRKDVELDRETTAFYNITVTARDLGTPSRNSSVVVGVHVRDI 1849

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   PV     ++ +V EGA I+++VA +      SG
Sbjct: 1850 NDNDPVLLNLPHNTSVREGAPIHTSVARVQAEDADSG 1886



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 26/171 (15%)

Query: 32   AASVP-VSLTVNLNDINDNAPRL-PM----IPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            + SVP   LT+N+ D+NDNAPR  P          ++  +    ++ + A D D G N +
Sbjct: 2276 SGSVPNARLTINVLDVNDNAPRFRPFGVSNFTEKILEGAQPGTTLLSVSAVDPDKGPNGQ 2335

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGGKSSQ 137
            + Y + H+   G  +   DP      +TGK+IA         +  + T++A D G  S  
Sbjct: 2336 VIYQLLHLPRGGYVRLE-DP------STGKIIANQTVDFEQVQWLNFTIRAQDHG--SPP 2386

Query: 138  TIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             I E+ V   +   N  +PVF Q +Y   V E   + +T+  ++ +   SG
Sbjct: 2387 RIAELPVFLRIVDVNDNNPVFLQPSYQEPVFENVDLGTTIVRVSATDADSG 2437



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 14/179 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+  +  ++  +V A +          SLT+N+ D+NDNAP +       +   E   
Sbjct: 1490 LDRESVD--RYLLKVRATDNGSPPRHTDHSLTINILDVNDNAPVIESQKGYNVSISENVG 1547

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QY 122
                ++++ ATD D+G NA + Y I    N  L  FR+D  +G + T       E   +Y
Sbjct: 1548 GGTSVLRVMATDRDIGPNAMLFYYI-TAGNQDL-TFRMDRMTGEMVTRPAPPDRERQQEY 1605

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA-SINSTVATIT 178
             + V   D G    SS T + V +V   N  +P F +  Y   +SEG  ++ +T+AT+T
Sbjct: 1606 ILNVTVEDDGTPPLSSPTTIYVHIV-DENDNAPEFPEEEYVTVLSEGPDTVGATIATVT 1663



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ---IQAGEAR---RQIV 71
            +F   V+A ++          L + + D+NDN P    + P     I   E +     + 
Sbjct: 2581 QFNLTVVATDQGRPPLWGTADLIITVIDVNDNRPVF--VRPANGTIIHITEEQPPGLPVY 2638

Query: 72   KIEATDNDLGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            ++ ATD+D GVN E+ Y+      SN     F IDP SGVI TT KL   +   YS+ + 
Sbjct: 2639 EVHATDSDEGVNGEVRYAFLQTGASNRDWENFHIDPISGVITTTVKLDREKLALYSLIIV 2698

Query: 128  ATDTG 132
            A D G
Sbjct: 2699 ARDMG 2703



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 24/179 (13%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-----QIQAGEARR 68
           PN G     V+A++    A +  V +TV + D NDN P       I      I AG    
Sbjct: 637 PN-GMIHLTVMAKDGGIPALNSTVPITVEVIDENDNPPEFSKSSYIVKILENINAGAT-- 693

Query: 69  QIVKIEATDNDLGV---NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
            ++ + ATD D       A + YS+      G  +FR++ RSG I TT  L      +Y 
Sbjct: 694 -VLLVNATDLDASREFGQASLIYSL-----EGSSQFRLNSRSGEITTTALLDRELKSEYI 747

Query: 124 ITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + V+A D G     K+    V ++++   N  +PV++   Y  NV E + IN+ V +++
Sbjct: 748 LIVRAVDGGVGPQQKTGIATVNITIL-DINDNAPVWRDEPYHANVVEMSPINTDVISVS 805



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 10/186 (5%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAG 64
            +++++ D      +   V AR+    + +  V + V++ DINDN P L  +P    ++ G
Sbjct: 1809 RKDVELDRETTAFYNITVTARDLGTPSRNSSVVVGVHVRDINDNDPVLLNLPHNTSVREG 1868

Query: 65   E-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAG 119
                  + +++A D D G NA +TY+I   +  G   F I+  SGV++    L    +A 
Sbjct: 1869 APIHTSVARVQAEDADSGRNALLTYNITAGNLDG--AFYINDTSGVVQVNRPLDRERVAE 1926

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVP--GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + +ITV+      + ++   ++ V+     N   PVF + TY   + E +   +TV  +
Sbjct: 1927 YRLTITVKDNPENSRIARRDSDLLVIAILDENDNRPVFTRTTYRAEIMENSLAGNTVTVL 1986

Query: 178  TVSRLA 183
                LA
Sbjct: 1987 NGPVLA 1992



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 33   ASVPVSLTVNLNDINDNAPRLPMIPPIQ---IQAGEARRQIVKIEATDNDLGVNAEITYS 89
            A +PV L +   D+NDN P   + P  Q    +  +    IV++ ATD D G  A I YS
Sbjct: 2389 AELPVFLRIV--DVNDNNPVF-LQPSYQEPVFENVDLGTTIVRVSATDADSGRFAAIEYS 2445

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV--- 144
            +      G  KF I P +G I     L     + Y++T  A D  G S     E SV   
Sbjct: 2446 LVD----GEGKFAIKPSTGEIYILSPLDRETKDHYTLTAVARDNPGSSPNNRRENSVQVL 2501

Query: 145  --VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V   N   P F +  Y+ +V E     ++V T+  + L  G
Sbjct: 2502 VTVLDVNDYRPRFTERVYNTSVFENEPSGTSVITVRATDLDEG 2544



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 24/160 (15%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRL-PMIPPIQIQA 63
            LDR+  +   +    +AR+  G++ +      V + V + D+ND  PR    +    +  
Sbjct: 2468 LDRETKD--HYTLTAVARDNPGSSPNNRRENSVQVLVTVLDVNDYRPRFTERVYNTSVFE 2525

Query: 64   GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGE 120
             E +   ++ + ATD D G N  + YS+      G H   F +DP +G++ +   L + E
Sbjct: 2526 NEPSGTSVITVRATDLDEGENGAVLYSML-----GPHSEAFILDPNTGLVRSRRLLQSSE 2580

Query: 121  QYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVF 155
            Q+++TV ATD G     G +   I  + V    N   PVF
Sbjct: 2581 QFNLTVVATDQGRPPLWGTADLIITVIDV----NDNRPVF 2616



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 13/122 (10%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSI---- 90
            + + + L DIND  PR   +      A  A+   +++K+ A DND+G N+ + Y I    
Sbjct: 2840 LEVQIELEDINDQTPRFTKMEYTAGVASNAKVGSELIKVAAVDNDVGNNSLVQYHIVTIR 2899

Query: 91   YHVSNTGLHK-----FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS 143
            Y  S +   +     F I  R G+I T     A     + + + A D  G S+ T V + 
Sbjct: 2900 YFQSQSNGSEDMGNIFTIGLRDGIIRTYDLFTAYSPGYFQLEILACDFAGHSTTTNVNIY 2959

Query: 144  VV 145
            ++
Sbjct: 2960 IL 2961



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 21/166 (12%)

Query: 33   ASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            A+   ++ VNL D+NDN P+   +P     P  +  G A   + K++  D D   N  IT
Sbjct: 875  ATASTTVFVNLLDLNDNDPKFLNLPFVAEVPEGLLNGSA---VFKVQVEDPDHDKNGLIT 931

Query: 88   YSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG--KSSQTIV 140
             ++      G+ +  F ++  +GV+ +T  ++  EQ   Y + + A D G   ++S + +
Sbjct: 932  MAL----QMGMPRLDFYLNTSTGVLTST-SVLDREQIGLYHLRIIAYDAGKFPRTSTSTL 986

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             V V+   N  +P F    Y+V++ E    +  V+ +  S   +G 
Sbjct: 987  TVKVL-DVNDETPTFNPRLYNVSLKESVPRDHIVSRLACSDNDAGL 1031



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%)

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQY-----SITVQA 128
            A DND+G NA + Y +       +  F +DP +GVI    G  +  E +      + + A
Sbjct: 1992 AKDNDIGPNAVVKYQLLGAR---VDLFTVDPNTGVILVRPGSRLDREAFQEPRVELFLVA 2048

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             D GG +S   + V+++   N   PVF  ++Y V + E +     V  ++ +   SG 
Sbjct: 2049 EDIGGLNSSVPLTVAIL-DENDNPPVFSPSSYSVRLPENSPTGVVVTQLSATDADSGS 2105



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            ++V+++A   D  +N ++TY      S   L  F+ID  +G I  TG L    G+ Y++T
Sbjct: 1336 EVVQVQAQSAD-NLN-QLTYRFDPDTSPAALALFKIDSVTGRITVTGLLDREKGDLYTLT 1393

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ-QNTYDVNVSEGASINSTVATITVSRLAS 184
            V A D G K   T+     +   N  SPVF   +   V+++E   +   VA +    + +
Sbjct: 1394 VVADDGGPKKDSTVKVSITILDENDNSPVFDITSDTSVDITEKTPMGEKVAVVLARDIDA 1453

Query: 185  GC 186
            G 
Sbjct: 1454 GL 1455



 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 8/171 (4%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGE-ARRQIVKIEATD 77
           RF +    K G        + VN+ D+NDN P       +  ++  E A + + ++ ATD
Sbjct: 532 RFTLTVLAKDGGGEETTGRIRVNVLDVNDNGPLFQKEAYVGSLRENEQAVQPVARVRATD 591

Query: 78  NDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG 132
            D   N  +TY++   S   G     +     VI  T  L    +      +TV A D G
Sbjct: 592 EDSPPNNFLTYTVASASAFAGYFSIIMVDGYAVISVTRPLDYEQVPNGMIHLTVMAKDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             +  + V ++V V   N   P F +++Y V + E  +  +TV  +  + L
Sbjct: 652 IPALNSTVPITVEVIDENDNPPEFSKSSYIVKILENINAGATVLLVNATDL 702


>gi|308500712|ref|XP_003112541.1| CRE-FMI-1 protein [Caenorhabditis remanei]
 gi|308267109|gb|EFP11062.1| CRE-FMI-1 protein [Caenorhabditis remanei]
          Length = 2600

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 20/166 (12%)

Query: 23  VIAREKQGT--AASVPVSLTVNLNDINDNAPRL----PMIPPIQ-IQAGEARRQIVKIEA 75
           V+ R K G   A S  V LT+N+ DIND+AP L     MI   + +  GE   ++ ++ A
Sbjct: 450 VVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGE---EVGRVYA 506

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG 132
            D D G N  I YS+      G   F ID  SGVI+TT KL+  E   +YS+ V A D G
Sbjct: 507 IDEDSGPNGIIRYSM-----EGSEDFIIDEDSGVIKTT-KLLDRETTSRYSLKVTARDMG 560

Query: 133 GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                T   ++VV    N  +P+F +  Y+V +SE     S + T+
Sbjct: 561 TPPLNTTTTMTVVLKDINDNAPIFDKKEYNVTISEEMPRGSQIITL 606



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 16/180 (8%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQ 62
           +LDR+  +   F   V A +      +    + V L+DINDNAP+             I 
Sbjct: 744 DLDRE--DRATFSVIVTASDHASPPLNTSTQIEVILDDINDNAPQFTSSSYAATISEDIP 801

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGEQ 121
            G +    +++ A D D+G N  + Y +   S++  +  FR+D  SG +  + KL   EQ
Sbjct: 802 VGTS---FLQVSAIDADIGPNGIVDYFLNESSSSPAIQLFRLDRTSGTLRVSSKL-DREQ 857

Query: 122 YSITV---QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +++ V    A D G  S     E+++ +   N  +P F+Q +YD+ ++E A + STV TI
Sbjct: 858 FAVIVLPIYARDRGTPSLSASSEITLTLSDVNDNAPSFEQLSYDLYIAENAPVGSTVGTI 917



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 21/182 (11%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           +++DR+  +  K   +V A E+     S   ++ V++ D+ DN+P    I       GE 
Sbjct: 229 KSMDREVLD--KHILKVTAYERVDPTISASTTVVVHVLDVQDNSP----IFEKDSYFGEI 282

Query: 67  RRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           R        ++ + A D D G N E+ YS+      G +   I+ +SGVI+T   L   E
Sbjct: 283 REDAPIGTTVLSVFARDLDSGENGEVEYSLGE--GNGKNLLAINSKSGVIQTAAPL-DRE 339

Query: 121 QYSIT---VQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             S+    V A+D G   + S+ +VE++VV   N  +PVF  ++Y+V + E  ++ + +A
Sbjct: 340 SLSLIRLDVIASDKGTPKRDSKALVEITVV-DVNDNAPVFASDSYNVTIMENITLPAVIA 398

Query: 176 TI 177
           T+
Sbjct: 399 TV 400



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 11/173 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++  +V AR+      +   ++TV L DINDNAP           + E  R
Sbjct: 542 LDRE--TTSRYSLKVTARDMGTPPLNTTTTMTVVLKDINDNAPIFDKKEYNVTISEEMPR 599

Query: 69  --QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITV 126
             QI+ ++A DND   + +I+Y I            I  +  ++  +G+L + + + I V
Sbjct: 600 GSQIITLKAVDND--EDQKISYRIEEADRDVFSILDIGDQGAILSVSGEL-SRQDHKIRV 656

Query: 127 Q--ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +  ATD GG   +T+V V  +   N+ +P F  + + V + E + I   V ++
Sbjct: 657 EISATDQGGLQGRTVVNV-FIDDVNS-APYFNDHPFSVKIPEHSPIGYPVISL 707



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ ++A D+D G NA + YSI   SN     FRID  SG I     L   ++  +S+ V 
Sbjct: 704 VISLKAEDHDRGDNARLIYSI--DSN---QFFRIDSSSGDISVASDLDREDRATFSVIVT 758

Query: 128 ATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           A+D       T  ++ V+    N  +P F  ++Y   +SE   + ++   ++
Sbjct: 759 ASDHASPPLNTSTQIEVILDDINDNAPQFTSSSYAATISEDIPVGTSFLQVS 810


>gi|110764123|ref|XP_392099.3| PREDICTED: neural-cadherin [Apis mellifera]
          Length = 3043

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 22/188 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREK-------QGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
            LDRD     K+   V A +        + T  +    + V + D+NDN P      M  P
Sbjct: 859  LDRD-----KYELNVTALDDGACCPNGETTTHTSTAVVVVFITDVNDNKPVFKDCSMYNP 913

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
               +       ++K++ATD D GVN ++ YSI    N    KF +D  +G +  T K+  
Sbjct: 914  KVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGQV-LTNKVFD 972

Query: 118  ----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                 G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI +
Sbjct: 973  REGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVENVKQDASIGT 1032

Query: 173  TVATITVS 180
             +  ++ S
Sbjct: 1033 NILRVSAS 1040



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 80/188 (42%), Gaps = 23/188 (12%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--- 60
           ++KE    D   P  +   V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 645 LAKELDFEDLRQPHIYSLIVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 702

Query: 61  ----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               I  G +   I+K++ATD D G NAEI Y +          F +D  SG+I    +L
Sbjct: 703 VDEDISLGTS---ILKVKATDADSGANAEIEYLVSD------DHFSVD-SSGIIVNNKQL 752

Query: 117 IAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            A      Y   V A D G         V +     N   P F Q  Y  NV E A  N+
Sbjct: 753 DADNNNAYYEFVVTARDKGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNT 812

Query: 173 TVATITVS 180
            V T+  S
Sbjct: 813 LVTTVVAS 820



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1527 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYFGNVTENGT 1586

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA++ YSI        TG   F I+  +GVI+T    +  
Sbjct: 1587 AGMVVMTMTAVDYDDPSEGTNAKLIYSIEKNVIEEETGSPIFEIESDTGVIKTAVCCLDR 1646

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F +  +  +V+ +EG  +    
Sbjct: 1647 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKEEWFTEVDETEGPDLPEMP 1705

Query: 174  VATITV 179
            + T+TV
Sbjct: 1706 ILTVTV 1711



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 9/166 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ- 60
            V++ +  DR+  + GKF    +    QG  +   V S TV + D+NDN P       ++ 
Sbjct: 965  VLTNKVFDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN 1023

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKL-- 116
              Q       I+++ A+D D   N  ITYS+   +N  GL  F I P SG I     L  
Sbjct: 1024 VKQDASIGTNILRVSASDEDADNNGAITYSLSSPNNDQGLEYFEIQPESGWIVLKKPLDG 1083

Query: 117  -IAGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
                + Y + V+A+D G +     V+V +     N + PV+  N Y
Sbjct: 1084 CFPRDSYRLRVRASDRGMQVLHADVDVELDVVDRNNKPPVWDANVY 1129


>gi|432892794|ref|XP_004075840.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
          Length = 4611

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 9/144 (6%)

Query: 41   VNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + + DIND+ P    P+      ++      +V++ A D D G NAE+ YSI    NTG 
Sbjct: 1573 IEVEDINDHVPIFTSPLYEGSVYESAAKGSAVVQVTALDKDKGKNAELRYSI-EAGNTG- 1630

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
            + FRI+P  G+I     L       Y +TV+ TD G    S+ T+V ++V    NT  P 
Sbjct: 1631 NTFRIEPVLGIISVAHNLDLTNVGHYVVTVRVTDNGVPPLSTNTVVRIAVTLSDNT-GPK 1689

Query: 155  FQQNTYDVNVSEGASINSTVATIT 178
            F Q  Y   VSE A I +++ T++
Sbjct: 1690 FPQPEYQTEVSENALIGTSITTVS 1713



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 10/151 (6%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V + V + D NDN P     +  +++   E R++   I ++ A D D G N++I+YSI  
Sbjct: 1257 VLVIVQVLDENDNKPTFHEKVYKVKLPERERRKKAEPIYRVFAYDLDEGPNSDISYSIVD 1316

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGP-- 148
             +  G  KF IDP++G +++     AG    +T++ATD G   KSS   + +  +P P  
Sbjct: 1317 GNEDG--KFVIDPKTGTVQSRRAFPAGGYDILTIKATDNGRPQKSSTARLHIEWIPQPPA 1374

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +T+  VF ++ Y+  V E   +   V  +++
Sbjct: 1375 STQPLVFSESFYNFTVMENDKVAEIVGVVSL 1405



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 16/141 (11%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            DINDN P    LP    +Q+ A E    I  + A D D GVN E+TY + +  +     F
Sbjct: 2095 DINDNFPVFVGLPYYAVVQVDA-EQGSHIFTVIAVDGDKGVNGEVTYHLKYDHD----HF 2149

Query: 102  RIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVE--VSVVPGPNTRSPVFQ 156
             I+ ++G+I         ++  +Y I + A D G +   + VE  ++VV   N   PVF 
Sbjct: 2150 EINQKTGIISLKKSFESDLSNAEYQIVIYAKDGGDEPLSSTVEFPITVV---NKAMPVFD 2206

Query: 157  QNTYDVNVSEGASINSTVATI 177
            ++ Y V V+E   + + + +I
Sbjct: 2207 KSFYSVYVNEDVEVYTPIISI 2227



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 14/187 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P        V A++  G  +   V +T  L D NDN+P        + Q
Sbjct: 2571 ICTVEKLDREDPANRDILLIVAAQDLGGRVSYCTVQIT--LLDDNDNSPSFVAT---EYQ 2625

Query: 63   AGEARR-----QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKL 116
            A           + +++A D D G NA++ YS+Y  +    +    IDP +G + T G  
Sbjct: 2626 ASLKHDVTKGFLVTQLQAHDLDDGSNAKVRYSLYSEARVPVVDILEIDPDNGWMVTKGSF 2685

Query: 117  --IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              +     S  V+A D G  +  ++V V + V       P F Q+ Y  N+ E   I S 
Sbjct: 2686 SHLRNSVLSFFVKAVDGGIPARHSLVPVYIHVLSSEAFIPFFSQHHYSFNIPENTPIGSV 2745

Query: 174  VATITVS 180
            + T+ VS
Sbjct: 2746 IGTVRVS 2752



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 10/177 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+++   LD +  +   + F V A +    A S  V++TV LND+NDNAP    +     
Sbjct: 2364 LILTARMLDHELAH--NYYFVVRATDNGYPALSSEVTVTVTLNDMNDNAPVFNQLLYEAY 2421

Query: 62   QAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLI 117
             +  A R   I  ++A+D D     ++ YSI    N  +H F ++  +G++  +   K  
Sbjct: 2422 VSELAPRGHFITCVQASDADSSDFDKLEYSILS-GNERMH-FVLEKSTGILALSSHRKQK 2479

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                YS+ V  +D G  +S   V + V+ G N  SPVF+++ Y+  + E A++ +TV
Sbjct: 2480 MDPTYSLNVSVSD-GVFTSTAQVHIKVL-GANLHSPVFERSVYEAELRENAAVGTTV 2534



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 15/150 (10%)

Query: 37   VSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            V++T+ + DINDN P      +L  +P   ++ G    +++++ A   D+G NAEITY+I
Sbjct: 3248 VNVTITVLDINDNHPIFEHRDQLTTVPE-DVRVG---TEVLRVYAASKDIGTNAEITYTI 3303

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
               S     +F + P SG I     L       Y +TV+A D G      +  V++ +  
Sbjct: 3304 R--SGNEHRRFHVHPHSGAIIVAQPLDYETCRDYFLTVEARDGGTPPLSAVTTVNINLTD 3361

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  +P+F ++ Y   VSE A I   V  +
Sbjct: 3362 VNDNAPMFSRDLYTAFVSEDAFIGEFVVQL 3391



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 22/137 (16%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN+P          +P   P+          ++ + ATD D+GVNA+I YS++
Sbjct: 3045 VTVMDANDNSPDCDQVMYTASIPEDLPVH-------SLLLTVGATDADVGVNAQIQYSLH 3097

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPN 149
                +G   F IDP +G +++   L   +   Y + VQA D GG+     +++ VV   N
Sbjct: 3098 ---GSGSQDFSIDPDTGEVKSLVTLDHEKTPSYRLVVQAMDGGGQWCSAEIQL-VVTDVN 3153

Query: 150  TRSPVFQQNTYDVNVSE 166
               P+F    Y  NV E
Sbjct: 3154 DNPPIFTMPQYTANVYE 3170



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++        + + V + DINDNAP    P+  P 
Sbjct: 1115 VIYTTDILDRETKD--SYWLTVYASDRGVVPQFTTIDVFVQVEDINDNAPLTSEPLYRPS 1172

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIA 118
              +       +++I+A D D   +  + +  Y  VS    H F +DP SG+I TT   + 
Sbjct: 1173 VPENSPPDVSVIQIQAQDPDTSPSTSLHWLSYQIVSGNPQHFFNMDPHSGLITTTSHKLD 1232

Query: 119  GE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             E   ++ + V  +D G    Q+ V V V V   N   P F +  Y V + E
Sbjct: 1233 RELQTEHVLEVVISDGGPNPRQSTVLVIVQVLDENDNKPTFHEKVYKVKLPE 1284



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V L V + DINDN P    M   + + +       ++++ A+D D   N  I Y
Sbjct: 2284 TGAHAEVDLGVFIQDINDNPPIFQKMSYSVSLSETAMIGTPVLQVIASDQDSEKNNIIRY 2343

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV- 144
             I+   +     F ID  SG+I  T +++  E    Y   V+ATD G  +  + V V+V 
Sbjct: 2344 QIFSQLHNSTDYFHIDSSSGLI-LTARMLDHELAHNYYFVVRATDNGYPALSSEVTVTVT 2402

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGA 168
            +   N  +PVF Q  Y+  VSE A
Sbjct: 2403 LNDMNDNAPVFNQLLYEAYVSELA 2426



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 14/148 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L++++ D NDNAP+       +I   E       I+++EATD D+G N E+ YSI     
Sbjct: 832 LSIHIEDANDNAPQFLQEDGYKITIPENMAIGTDIIQVEATDKDMGPNGEVMYSIL---- 887

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPN 149
           T    F I+  +G++    +L      ++++ ++A D   K S     T +E+ ++   N
Sbjct: 888 TSTTPFGINSTTGMVYVAAQLDRELTSRFTLKIEARDRADKESPKFSVTTLEI-ILEDVN 946

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATI 177
             SP+F  + +     E   + + VA +
Sbjct: 947 DCSPLFIPSVFKARALEDLPVGTVVAWL 974



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   V AR+      S   ++ +NL D+NDNAP           + +A     +V++ A 
Sbjct: 3335 YFLTVEARDGGTPPLSAVTTVNINLTDVNDNAPMFSRDLYTAFVSEDAFIGEFVVQLVAE 3394

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-- 132
            D+D  +N  + YS+  VS     +F IDP +GVI+    L       +S+T++A D+G  
Sbjct: 3395 DSDSHLNGAVLYSV--VSGDQGSQFFIDPINGVIKVNKPLDRETIPSFSLTIRALDSGVP 3452

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
              SS  +V +  V   N   P F        + E   I +T+  ++V
Sbjct: 3453 PMSSTALVNID-VSDVNDNPPTFSSANLTAVIQENKPIGTTILQLSV 3498



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLT-VNLNDINDN--APRLPMIPPIQIQAGEAR--RQIVKI 73
            +   V A++K    + + V+   + + D+N+N  AP         +    AR    ++++
Sbjct: 1022 YNLTVKAKDKGRPVSLLSVTFVELEVIDVNENLYAPYFTHFALTGVVKENARIGTTLLQV 1081

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A D+D G + EI YSI     +GL +F ID  +GVI TT  L     + Y +TV A+D 
Sbjct: 1082 SANDDDTGRDGEIHYSIR--DGSGLGRFSIDEETGVIYTTDILDRETKDSYWLTVYASDR 1139

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G     T ++V V V   N  +P+  +  Y  +V E +  + +V  I
Sbjct: 1140 GVVPQFTTIDVFVQVEDINDNAPLTSEPLYRPSVPENSPPDVSVIQI 1186



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           ++V + D+ND  P   P    + I ++   R  I ++ ATD D+G N E     Y     
Sbjct: 162 VSVQVLDMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADIGSNGEF----YFFFKE 217

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            +  F + P SGV+  +GKL   EQ  Y++ + A D G K
Sbjct: 218 KVDLFAVHPTSGVVYLSGKLNVDEQTLYNLEILAVDRGMK 257



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 6/139 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGE 65
            NLD +      F  QV    +    A  P  +T+ + D ND+ P         + +    
Sbjct: 1857 NLDHETFPIFIFHVQVRDSGRPQLTADSPTEVTIQVIDSNDSPPHFTQSAYEAVLLLPTY 1916

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               + +++ A D D  V  E+T+S+    +  L  F I+P SG+I       + E +  T
Sbjct: 1917 FGVEALQVSAIDPDKDVATELTFSLV---DGSLEHFDINPTSGIIVVKNINFSKELFRFT 1973

Query: 126  VQATDTGGKSSQTIVEVSV 144
            VQ +D G  SS  +V ++V
Sbjct: 1974 VQVSD-GKFSSSALVTLNV 1991



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 11/126 (8%)

Query: 18   KFRFQVIAREKQGTAASV-PVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIE 74
            +F F+V A  KQ    S+   ++ VN+ DINDN P       +   ++      ++++++
Sbjct: 2802 EFYFKVTATVKQAKLDSMTSANVKVNVFDINDNRPAFETNSYVATVMEGTAVGTKVIRVQ 2861

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHK------FRIDPRSG--VIETTGKLIAGEQYSITV 126
            A+D D G N ++TY +  +  +  +       F ID  SG   I T         Y+ TV
Sbjct: 2862 ASDPDSGANGQVTYRLGSLIKSKGNSEPLSDIFNIDSNSGWIFIRTDLDHETSPFYTFTV 2921

Query: 127  QATDTG 132
             A D G
Sbjct: 2922 VALDHG 2927



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 12/134 (8%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITY 88
           ++ + V + + + D NDN P        ++   E+      ++ + ATD D G N  ITY
Sbjct: 466 SSDLRVKVLITIEDANDNTPTFSQ-SSYEVFVNESVPVGTNVLTVSATDEDRGENGYITY 524

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSV 144
           SI   S+     F+ID  SGVI T+  L    + E +   V+A+D G     ++ V V++
Sbjct: 525 SI---SSLQPLPFKIDQFSGVISTSSLLDFESSTEIFVFLVRASDWGSPYRRESEVNVTI 581

Query: 145 -VPGPNTRSPVFQQ 157
            +   N   P+F++
Sbjct: 582 HLENVNDNQPLFEK 595



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 99   HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            H F+I+  SGVI     L     E Y++ VQA +  G +S   + + ++   N   PVF 
Sbjct: 1731 HVFQINQYSGVITNQKALDYETTESYTLIVQAVNMAGMASNATLLIQIL-DENDNPPVFL 1789

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q+ Y  ++SE A + S V  +
Sbjct: 1790 QHHYYGSISEVAPVKSVVLNL 1810



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D      ITYS    ++ G  +F ID  +G I T  KL     A     + 
Sbjct: 2534 VIQVKATDKDQEPFGHITYSF--ANDVGSDQFSID-SNGYICTVEKLDREDPANRDILLI 2590

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V A D GG+ S   V+++++   N  SP F    Y  ++    +    V  +    L  G
Sbjct: 2591 VAAQDLGGRVSYCTVQITLL-DDNDNSPSFVATEYQASLKHDVTKGFLVTQLQAHDLDDG 2649


>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
 gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
 gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
          Length = 4981

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S  V + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVLATDMGSPPQSSMVRINVSLLDINDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  I YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGLNGTIKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   G+L   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGSNGLIHYSV--IKGNEERQFAIDSTSGQVTLIGRLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L    
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRMLDYET 1908

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   A     ++T+N  D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPALLSETTVTINTVDSNDNAPQFLKTKYFTPVTKHVKVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     L +   + + ITV
Sbjct: 3002 LIKVTAVDDKDFGLNSEVEYFILNENHLG--KFKLDNHTGWISVAAPLTSDLNQNFLITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  S+ + V T++
Sbjct: 3060 TAKDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSVGAIVRTVS 3112



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
             S+TVN+ D+NDN+P    +P    P  ++   +   ++ + ATD D G NA I Y+I  
Sbjct: 3178 CSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTI-Q 3234

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             S++ L  F IDP +GV+ T G L     + Y +TV+A +   +   +   V++ + G N
Sbjct: 3235 SSDSDL--FVIDPNTGVVTTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTN 3292

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P F    Y   +SE A   + V  +  S
Sbjct: 3293 EYVPRFVSKLYYFEISEAAPTGTIVGEVFAS 3323



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G     
Sbjct: 612 LGDNGTVRFSLQE-AETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDMGSPPQS 670

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++V ++V +   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I ++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   YS
Sbjct: 2170 GTDITQVFAADGDEGTNGQVRYGI--VDGNANQEFRIDSVTGAI-TVAKPLDREKTPTYS 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         +S+V    N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTISIVLLDINDFVPIFELSPYSVNVPE 2270



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  S+   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDSM---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ R+G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFTINERNGNISLLGPLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             S + +    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 976  LSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 1013



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+NDN     +P+L  IP   PI          + K +ATD D G N+ I Y++
Sbjct: 2037 ISIILLDVNDNPPTFLSPKLTYIPENTPIDTI-------VFKAQATDPDSGPNSYIEYTL 2089

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPG 147
             + S    +KF I    G +  TG+L   E   Y++TV ATD G  S  +  EV V V  
Sbjct: 2090 LNPSG---NKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLD 2146

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +PVF Q  Y V ++E
Sbjct: 2147 INDNNPVFAQAMYKVEINE 2165



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN P     P + +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKEDPFVSEILENLSPRKILTVSAV 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  ++    H F I+  +G I +   L   +  QY + V+++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--INGNKEHSFSINHATGEIRSIRPLDREKISQYVLIVKSSDRGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   V + ++   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDIGVNAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2897



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 32/156 (20%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-------EQYSITVQATDTGGK 134
           +NA + YSI  VS  GL  F I   SG++ TTG  +AG        Q  + + A D G  
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLV-TTG--LAGGLDRELASQIVLNISARDQGVH 560

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
              +  ++ V +   N   PVF Q   Y+V+V E A
Sbjct: 561 PKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENA 596



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPE-PSIVVSFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   AR--RQIVKIEATDNDLGVNAEITYSIYHVSN-----------TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS   V             T  H+F    R  ++  
Sbjct: 1113 QRPGSFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIV--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 13/115 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
             S     KF ID   G I   G L    + + +V   D G   K+  T V V  V
Sbjct: 2506 -SGRNSEKFHIDTLRGAIMAAGALNGTSEVTFSVYVKDGGSVPKTDSTTVTVRFV 2559



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRPGSFVGKVS 1123



 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPTFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I        IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPTGTIVGEVFASDRDLGSDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG    + V  ++
Sbjct: 3401 -PPVFSLNIYSVQISEGVPTGTHVTFVS 3427



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500


>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
          Length = 5030

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 13/190 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V    LDR+  +  ++   + AR+      S   ++ +++ D NDNAP   M    +I 
Sbjct: 1289 IVLNRALDRETSD--RYTLTIGARDAGLPNLSTSTTVIIDVLDENDNAPEF-MHSEAKIS 1345

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            A E      ++V  +ATD DLG+N+EI +SI       +H  FRIDP+ G +     L  
Sbjct: 1346 ALETLPVGSELVTFQATDADLGINSEIAFSI---GAGNMHDTFRIDPQLGTLYLEKHLDF 1402

Query: 119  GEQ--YSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              Q  Y + + A+D G  S   +I  V  V   N  +PVF        + EG  +N+ + 
Sbjct: 1403 EMQRSYHLNITASDQGNPSLVSSISFVITVEDANDNAPVFPSTAIVRQIQEGIPLNTPIV 1462

Query: 176  TITVSRLASG 185
            T+T     SG
Sbjct: 1463 TVTAEDPDSG 1472



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 12/189 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
            ++  ++NLDR+  +  +++  + A + +    +V   L + + D NDN+P          
Sbjct: 1830 ILTLRDNLDREFQS--QYKLTIKADDGEQFTETV---LIIKVIDTNDNSPTFSEAAYSFD 1884

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I     R   V  + A D D G+NA+++Y++  +S+ G   F ++P+SGV   T +L   
Sbjct: 1885 IPEDTGRGAFVGAVVANDMDEGINAQVSYTV--LSDWGNDVFSLNPQSGVFTLTSRLDYE 1942

Query: 120  --EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              + Y   VQA DTG  S  + V V   V   N  +P+F   +Y   + E  +I S+V T
Sbjct: 1943 QVQHYIFVVQAQDTGRPSLSSTVTVYFNVLDLNDNAPLFDPMSYSDELYENITIGSSVIT 2002

Query: 177  ITVSRLASG 185
            ++ +   SG
Sbjct: 2003 VSATDQDSG 2011



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 8/162 (4%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA- 66
            N+  D  + G +   V A ++     S   +++V + D NDN PR   +  + +    A 
Sbjct: 2781 NVKLDREDVGHYVLIVEAVDQGAPQRSGTATVSVTVADKNDNPPRFTRLFSVNVTENAAI 2840

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               ++++ ++D D+GVNA  TYS +  + TG  KFRIDP SG +   G +   + E+Y +
Sbjct: 2841 GTFVIQVTSSDRDIGVNANATYS-FTENPTG--KFRIDPVSGNVTVAGVIDRESKEEYLL 2897

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             V A D G   ++T + ++ V   N  +P F+ + Y  N +E
Sbjct: 2898 KVSAVD-GSWRAETPLTIT-VQDQNDNAPEFEHSFYSFNFAE 2937



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 19/185 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQ 60
            ++  K  LDR+  +   +   V+A +      S  VS+T+++ D NDN P+         
Sbjct: 1074 MLYVKSPLDREAKD--YYALTVVAEDGGMPPRSSSVSVTIHIIDENDNPPKFNNETFSFY 1131

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--- 116
            I   EA    V ++ ATD D+G NAE+T+SI     T    F IDP+SG I+T       
Sbjct: 1132 IPENEAPDSYVGRLTATDRDVGRNAELTFSI----ATSQSDFSIDPKSGFIKTLRYFDRE 1187

Query: 117  ----IAGEQYSITVQA--TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
                  G+ Y I ++A  +D G    +    + V +   N  +P F +  Y   VSEGA+
Sbjct: 1188 RLLQTTGQDY-IVLEAVVSDNGVIRLRDRARIHVFILDVNDNAPAFSRVPYKTQVSEGAA 1246

Query: 170  INSTV 174
            +++ V
Sbjct: 1247 VDTQV 1251



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 9/139 (6%)

Query: 45   DINDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
            D+NDNAP    +P   Q+  G A   Q+ ++ ATD D  +N  I Y  Y     G HKFR
Sbjct: 1224 DVNDNAPAFSRVPYKTQVSEGAAVDTQVFRVVATDADDQLNGGIFY--YITEGNGDHKFR 1281

Query: 103  IDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQN 158
            ID  SG I     L     ++Y++T+ A D G    S+ T V + V+   N  +P F  +
Sbjct: 1282 IDEASGQIVLNRALDRETSDRYTLTIGARDAGLPNLSTSTTVIIDVL-DENDNAPEFMHS 1340

Query: 159  TYDVNVSEGASINSTVATI 177
               ++  E   + S + T 
Sbjct: 1341 EAKISALETLPVGSELVTF 1359



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+  +  K+   ++A +    A      L +++ND+ND+ P         +  +    
Sbjct: 441 LDREKIS--KYNLTIVATDSGSPARKALAFLIIHVNDVNDHEPIFEKSEYSAVLSELVSV 498

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITV 126
              +  I ATD D G+N+ I Y+I  VS      F ID  SG+I T  +L   +Q ++ +
Sbjct: 499 GSYVAGITATDEDTGINSNIFYAI--VSGNDQQWFDIDMVSGLITTHHQLDREQQDTVEL 556

Query: 127 QATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + +   G    + + T ++++++   +      QQ+   VN+SE    N+ VA +T
Sbjct: 557 RISARDGGPNPRWAYTHIKITILDENDEHPQFVQQSLKQVNLSENTPPNTLVALLT 612



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 19/177 (10%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----------PMIPPIQIQAGEA 66
            ++   + AR+    + +    L +N+ D NDN+P                PP  + + + 
Sbjct: 2679 QYELWIEARDSDDISLASVTRLLINVTDFNDNSPIFHHAIYYASILEEQFPPSPLMSSQL 2738

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
               ++ + ATD D G N  + Y + +  +   + F +D  SG I T  KL   +   Y +
Sbjct: 2739 ---VLTVHATDLDSGRNGLVRYQLRNSGDLD-NAFSVDAESGKIYTNVKLDREDVGHYVL 2794

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V+A D G         VSV V   N   P F +  + VNV+E A+I + V  +T S
Sbjct: 2795 IVEAVDQGAPQRSGTATVSVTVADKNDNPPRFTR-LFSVNVTENAAIGTFVIQVTSS 2850



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 14/157 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRL--PMIPPIQ-IQA 63
            LDR+  +  +    V+A+ + G     +    + +++ D ND AP    P+   +Q +++
Sbjct: 3421 LDRE--SHARIVLSVMAKNRGGIRGNDTDEAQVIISIQDGND-APVFVQPIYHVLQLVES 3477

Query: 64   GEARRQIVKIEATDNDLGV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
                 ++V +EA D D+   N E TYSI  +   G   FRIDPRSG+IET   L    Q 
Sbjct: 3478 APIGTKVVTVEAVDKDVRPPNNEFTYSI--LGGEGSKAFRIDPRSGIIETVSLLDRERQA 3535

Query: 122  -YSITVQATDTGGKSSQTIVEVS-VVPGPNTRSPVFQ 156
             Y++TV A D G        EV  V+   N   PVF+
Sbjct: 3536 VYNVTVGAIDRGVPPQTGTTEVHIVIQDINDNGPVFE 3572



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 24/181 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEAR 67
            KF   + A +          +LTV L D+NDN PR             +PP  +      
Sbjct: 3219 KFTLNITATDMGFEPKLATATLTVLLTDVNDNPPRFNQSHYDGFVRENLPPDTL------ 3272

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              ++ +EA D D   N  I YSI  +   G   F ID  +GV+ T       E+  Y + 
Sbjct: 3273 --VMDLEAFDADSAKNGIIQYSI--IGGNGKDFFTIDSETGVVTTKSSFDFEEKNYYELD 3328

Query: 126  VQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V A++        T+V V +  G N   P F Q  +   VSE   + ++V  I  +   +
Sbjct: 3329 VLASNPDSSMFGSTVVRVHIT-GRNEFFPKFVQPVFQFTVSESVPVGASVGIIQATDRDN 3387

Query: 185  G 185
            G
Sbjct: 3388 G 3388



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 16/162 (9%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATD 77
             +Q++   + G +    VS+ V + D+NDN PR      +   ++   A  +I   +A D
Sbjct: 880  HYQLLIVARSGFSYGT-VSVNVTVQDVNDNPPRFDKTRAVARVVENWPANHEIYLAKAED 938

Query: 78   NDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQY-----SITVQATDT 131
             D G N+ ITYS+        H+ F I P  G+I     L   + Y     ++ V ATD 
Sbjct: 939  LDTGNNSRITYSL----TLNPHELFTISPTLGMIYLNRPLQHEQFYFESSLTLEVTATDD 994

Query: 132  GGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            G    SS+ +V ++ +   N  +PVF+ ++Y+ ++ E  S+N
Sbjct: 995  GSPPLSSRQLVTLN-LEDVNDHTPVFEYSSYETSLLETISVN 1035



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 17/161 (10%)

Query: 34   SVPVSLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            S  V +T+ L D+ND AP         ++  I I        ++ I+A D D G N+ I 
Sbjct: 2069 SSTVQVTIILKDVNDMAPEFVSSNETAVMENIPINT-----VVMAIKAIDRDEGRNSYIE 2123

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV- 144
            YS+  + +     F + P  G++  +  L   +   Y++ V A D G  S    ++V V 
Sbjct: 2124 YSLAPIDDGC---FTLGPVDGLLRVSALLDRESRANYTLHVMAYDRGLPSRSQSLDVLVR 2180

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V   N  SP+F    Y  +VSE A+I  +V  ++ + L  G
Sbjct: 2181 VLDENDNSPLFDPKVYSASVSENATIGLSVLQVSATDLDEG 2221



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 18/174 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRL-PMIP--- 57
            + ++  LDR+  +  K+   V+A +   T   +  V++ + +ND+ND+ P    M+    
Sbjct: 2456 IFTQTKLDREERS--KYELVVVASDSSLTNTRTTEVNVILFVNDVNDHPPIFREMVDIIY 2513

Query: 58   -PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P  IQ G+    ++   A D D+G+N +I   +YH+      KF ++  +GVI+ +  L
Sbjct: 2514 IPDNIQPGQF---VLGANAVDADVGLNGKI---VYHLFGDDASKFSVNQDTGVIKASTLL 2567

Query: 117  IAGEQ----YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +       + + ++A+D+G  S  +I  V +   P  + PV + +      SE
Sbjct: 2568 ASSASKSATFKLEIRASDSGVNSLSSISTVEIQLRPADQFPVIRSDAKSFTFSE 2621



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 13/169 (7%)

Query: 19   FRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR-RQIVKIE 74
            FR  V+A ++   A+   S    +TV + DINDNAP    +    +  G  R  +I+ I 
Sbjct: 1525 FRLTVVATDQAEPASNRISAEKLVTVIVEDINDNAPTFTSVSAGLLPKGAERGHEILHIH 1584

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            A D D   N  +TY +  VS      F ++  SG + T  K +A  +  Y ++V+ATD  
Sbjct: 1585 AADADANTNGIVTYEM--VSGDA-ELFSLERSSGRL-TLRKDVATPEITYQLSVRATDEA 1640

Query: 133  GKSSQ--TIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              S +  T + ++V+     T  P+F +  Y  +VSE     + V T++
Sbjct: 1641 VHSQRKSTGLHITVISVTEETTGPLFSKKLYTGSVSENEPAGTNVLTVS 1689



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 25/194 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V+   LDR+  +  +F   +++ +      + P+ + + + DINDNAP  P  P I++ 
Sbjct: 100 IVTAVVLDREALSSDRFDLVILSSQ-----PTYPIEVRILVVDINDNAPAFPE-PTIEVS 153

Query: 63  AGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGV----IE 111
             E+     +++   ATD D G N ++T +   V      KF++    +P        +E
Sbjct: 154 FSESANTGTRVILDTATDGDAGEN-DVTTNYEIVGGNDDLKFKLAVTTNPSGETPYLHLE 212

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSS---QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           TTGKL    Q  Y + + A D GG+ +     IV +++V   N   P+F  + Y V+++E
Sbjct: 213 TTGKLDRETQNHYWLNISAQD-GGRPALLGYLIVNITIV-DVNDNPPIFDHSDYVVSLNE 270

Query: 167 GASINSTVATITVS 180
                + V  +T +
Sbjct: 271 SVPPGTHVMQVTAT 284



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)

Query: 3   VVSKENLDRD--PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           V ++  LDR+  P    ++  +V+AR++     S   ++ + + D NDN+P     P   
Sbjct: 649 VTTRTKLDREVIP----EYEIKVVARDQGNPPLSSTATIVLRVLDANDNSPEF--YPQQY 702

Query: 61  IQAGEARRQIVKI----------EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
           + A     Q+VKI           A D D   NA++TYSI    + G   F ++ ++G+I
Sbjct: 703 LVAVSETLQVVKIYKEPEVVATVTAMDEDEDENAQVTYSI---KSGGEGVFDVEEQTGII 759

Query: 111 ETTGKLIAGE--QYSITVQATDTGGKSS--QTIVEVSVVPGP 148
                L +    QY + V A D G + +    +VE+ V   P
Sbjct: 760 RLRSPLNSARKAQYKLKVAAKDRGDRKAVEDAVVEILVENSP 801



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            IV + A+DND G N  + Y+I  VS    +KF IDP +G I     L      ++++ + 
Sbjct: 3168 IVSVTASDNDSGPNGVVHYAI--VSGNEENKFLIDPNTGDISVANTLDFDTLPKFTLNIT 3225

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            ATD G +       ++V +   N   P F Q+ YD  V E
Sbjct: 3226 ATDMGFEPKLATATLTVLLTDVNDNPPRFNQSHYDGFVRE 3265



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)

Query: 84   AEITYSIYHVS--NTGL-HKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQ 137
            A++ Y IY+V+  N G+   F IDP SGV+ T+G L      E+Y + + A      S Q
Sbjct: 1698 AQVEYFIYNVTANNRGVPLVFEIDPESGVVSTSGILDREANAEEYELDIIAVTRATPSPQ 1757

Query: 138  TIV---EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            T +    V +V   N   PVF+ +   ++VSE   I   + T+T + L
Sbjct: 1758 TSLCKARVKIV-DKNDSPPVFRDDNAVISVSEDLIIGQPITTVTATDL 1804



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 19/200 (9%)

Query: 3    VVSKENLDRDPPNPGK-----FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--- 54
            ++SK+ +     N G      +   ++A +      S    ++VN+ + N  APR     
Sbjct: 2982 ILSKQTVRYKHTNKGSSPENMYTLWIVATDNGKPPLSSECLVSVNVINANSYAPRFDKSV 3041

Query: 55   MIPPIQIQA--GEARRQIVKIEATDNDLG---VNAEITYSIYHVSNTGLHKFRIDPRSGV 109
               P+   A  G+   Q++      + +G   V A+ +     V   G   F ++  +G 
Sbjct: 3042 FFSPVPDSAVLGQNILQLMAERGQPDTIGGGTVQAD-SVEFTKVGGNGSDFFNVEKETGW 3100

Query: 110  IETTGKLIAGE--QYSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
            +  TG L      ++ + V+A  TG  S+  +T+V + VV G N  +P+F   +Y + V 
Sbjct: 3101 VTVTGPLFGRRDMEFVLVVRAYSTGAPSTHDETLVRL-VVTGENRHTPIFTALSYQIIVQ 3159

Query: 166  EGASINSTVATITVSRLASG 185
            E   + S + ++T S   SG
Sbjct: 3160 ENEPLGSIIVSVTASDNDSG 3179



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 12/168 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAG-EARRQIVKIEA 75
             + F V A++    + S  V++  N+ D+NDNAP   PM    ++         ++ + A
Sbjct: 1946 HYIFVVQAQDTGRPSLSSTVTVYFNVLDLNDNAPLFDPMSYSDELYENITIGSSVITVSA 2005

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD D G N ++ YSI  +      +FRI  ++G I T+  L    Q  Y++ + ATD   
Sbjct: 2006 TDQDSGDNGKLVYSI--IGGNENEQFRI-TQNGTIMTSQSLDRETQSLYNLVIMATDQAK 2062

Query: 134  ---KSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               K   + V+V+++    N  +P F  +  +  V E   IN+ V  I
Sbjct: 2063 PPEKRLSSTVQVTIILKDVNDMAPEFVSSN-ETAVMENIPINTVVMAI 2109



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 16/136 (11%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEAT 76
            +   + A ++   +    +S  + + D NDNAP  P    + QIQ G      IV + A 
Sbjct: 1408 YHLNITASDQGNPSLVSSISFVITVEDANDNAPVFPSTAIVRQIQEGIPLNTPIVTVTAE 1467

Query: 77   DNDLGVNAEITYSIYHVS-----------NTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
            D D G+N+ I YS+                +G H F I P +GV+     +     + + 
Sbjct: 1468 DPDSGLNSRIRYSLIQQEPSVLVGSSTRGGSGPH-FAIRPDTGVVYVVRPIDREFADTFR 1526

Query: 124  ITVQATDTGGKSSQTI 139
            +TV ATD    +S  I
Sbjct: 1527 LTVVATDQAEPASNRI 1542



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 9/163 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEA 66
            LDR+  +   +   V+A ++   + S  + + V + D NDN+P   P +    + +    
Sbjct: 2149 LDRE--SRANYTLHVMAYDRGLPSRSQSLDVLVRVLDENDNSPLFDPKVYSASVSENATI 2206

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
               ++++ ATD D G+N  + Y+I  V       F I   SG+I     L      QY +
Sbjct: 2207 GLSVLQVSATDLDEGLNGRVRYTI--VGGDINFDFHIGEDSGIIRVAKNLNFERRSQYVL 2264

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            T+Q  D+G          ++ +   N  +P+F  + Y   V E
Sbjct: 2265 TIQVEDSGNDVRYDTATATITIMDINDNAPIFLDSPYIAYVME 2307



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 79/205 (38%), Gaps = 41/205 (20%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPP 58
           LDR+  N   +   + A++    A    + + + + D+NDN P              +PP
Sbjct: 217 LDRETQN--HYWLNISAQDGGRPALLGYLIVNITIVDVNDNPPIFDHSDYVVSLNESVPP 274

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
                      ++++ ATDND G NA +TY I         +F +D  +GVI TT +L  
Sbjct: 275 --------GTHVMQVTATDNDAGENARVTYYISESET----QFAVDAETGVITTTEQLNC 322

Query: 117 ---------IAGEQYSITVQATDTGG--KSSQTIVEVSVVPG----PNTRSPVFQQNTYD 161
                       +    TV A D G   +  +T V V+++      P  R   F      
Sbjct: 323 QRSCPQLVSSCNKSCVFTVFARDHGNPRQDGRTYVTVNLLDANDHDPIIRFRYFPATADF 382

Query: 162 VNVSEGASINSTVATITVSRLASGC 186
             V E A   S VA ++V     G 
Sbjct: 383 ATVDENAQNGSVVAAVSVIDFDEGA 407



 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 17/156 (10%)

Query: 40   TVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNT 96
            T+ + DINDNAP     P I     E  R    I+ ++A D D      + Y I    + 
Sbjct: 2283 TITIMDINDNAPIFLDSPYIAYVMEENNRLPVPIITVQAHDADSPPYNRVRYLIKD-GDK 2341

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-----GKSSQTIVEVSVVPGPN 149
            GL  FR++  +G I     L    Q  Y I V A D+G     G  +  I     V   N
Sbjct: 2342 GL--FRVNGTTGEISVLRSLDRETQSRYEIIVVAMDSGVPVLTGTGTVLIF----VEDIN 2395

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              SP F Q+ Y  +V E   I  +V  ++     SG
Sbjct: 2396 DHSPEFSQSQYRSDVVENGPIGLSVTKVSAFDNDSG 2431


>gi|266454921|ref|NP_001161139.1| cadherin-18 isoform 2 preproprotein [Homo sapiens]
 gi|194379154|dbj|BAG58128.1| unnamed protein product [Homo sapiens]
          Length = 574

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|291238398|ref|XP_002739116.1| PREDICTED: predicted protein-like, partial [Saccoglossus kowalevskii]
          Length = 2257

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 9/138 (6%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +T+NLND+NDNAP   M      +Q   +    + ++ ATD DLG N  I YSI   +N+
Sbjct: 1642 VTLNLNDVNDNAPTFTMATYAFVVQENVDISTSVGQLAATDPDLGANGFIAYSIESGANS 1701

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F I+  +G I T+  +I  E   QYS+  +A D G  S  T+V+V + V   N   
Sbjct: 1702 --DHFAINSNTGEIHTSA-VIDRESISQYSLVCKARDLGSVSQFTLVDVVITVEDENDND 1758

Query: 153  PVFQQNTYDVNVSEGASI 170
            PV++   Y++ + E + I
Sbjct: 1759 PVYESTLYEIFMDENSDI 1776



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 17/182 (9%)

Query: 18   KFRFQVIAREKQG--TAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVK 72
             F  +V A++K G   A S    +T+++  +N+  P    LP      I+     + + +
Sbjct: 1084 SFVLEVTAKDKNGGANANSDTSRVTISILPVNEYTPVFQSLPYDDATVIENAPLGKSVYQ 1143

Query: 73   IEATDNDLG--VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            + ATD+D    V+ ++ +SI   ++ G   F ID   GVI T  +L       Y + V A
Sbjct: 1144 VGATDDDAAGHVHGQVRFSITSGNSAG--HFVIDEMDGVISTVAELDRETRSSYDLVVTA 1201

Query: 129  TDTGG-----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            TD+       +S++  V ++V    N  +PVF    Y V++SE  ++  TV T+T + L 
Sbjct: 1202 TDSSAALNDERSAEENVTITVT-DVNDNTPVFVPAVYSVSISESLAVGETVLTLTTNDLD 1260

Query: 184  SG 185
             G
Sbjct: 1261 QG 1262



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 18/179 (10%)

Query: 19  FRFQVIAREKQG--TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ------AGEARRQI 70
           +   V A +  G  T A+V + +T      N++ P     P + +       +G     +
Sbjct: 320 YTLLVTADDGGGILTTATVVIEITSE----NEDTPAFTTFPAVVLTMLENSPSGTTVADV 375

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQ 127
             I A D+D G +  I+YSI  V +  ++KF I+P +G I T G        ++Y+ITV 
Sbjct: 376 GDIVAEDSDEGSDGIISYSIDAV-DPNVNKFYIEPSTGEIVTIGTFDYETDPQRYTITVM 434

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVSRLAS 184
           A D G  S+    ++ + +   N   P+F QN  Y  +V EG+ ++++V  +T +   S
Sbjct: 435 AADDGNPSNTVTDDIILDIEDYNDNEPIFSQNIYYRDDVVEGSPVDTSVLALTTTDADS 493



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 9/145 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV + D+NDN P L       +  +       +  ++ATD D+  NA++TY++   S  
Sbjct: 1537 LTVLITDVNDNDPILNPASYSALLDEDTPVGTVVFDVDATDADINENADLTYAL--TSGN 1594

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
             L  F ID  +G+I T  +L+  E    Y++ V  TD G  +     +V++ +   N  +
Sbjct: 1595 DLGHFTIDQDTGII-TVEQLLDRETVDAYNMIVTVTDDGTPTRSNTADVTLNLNDVNDNA 1653

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F   TY   V E   I+++V  +
Sbjct: 1654 PTFTMATYAFVVQENVDISTSVGQL 1678



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LT+ ++D NDN P        I I    A    I+ + ATD D GVN++I YSI  V+  
Sbjct: 1326 LTIVVDDENDNRPLFGQDQYTINIDENIAIGTNIITVVATDEDAGVNSDIQYSI--VAGV 1383

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            G     I+P +GV+ T   +       YS+ ++A D G  S      + + V   N  SP
Sbjct: 1384 GQDNVEINPTTGVVSTVADIDYEMYVMYSLMIEAVDGGTPSLTGYTNIQISVNDLNDNSP 1443

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
                + + V + E  + +  V  I V+   S
Sbjct: 1444 QVSPSLFTVAIPEDTAADVLVTPIQVTDADS 1474



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)

Query: 39   LTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +T+ + D+NDN P  +P +  + I    A  + V +  T NDL         +  +S   
Sbjct: 1218 VTITVTDVNDNTPVFVPAVYSVSISESLAVGETV-LTLTTNDLDQGVNKLRDVAKLSGDA 1276

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSV----VPGPNTR 151
               F ++    VI         + Y I+ + TD G    SS+ +V ++V    V   N  
Sbjct: 1277 DGDFTLNGNDIVIANALAYHIKDFYEISYEVTDQGSPPLSSEGLVTITVLTIVVDDENDN 1336

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P+F Q+ Y +N+ E  +I + + T+  +   +G
Sbjct: 1337 RPLFGQDQYTINIDENIAIGTNIITVVATDEDAG 1370



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 58/126 (46%), Gaps = 15/126 (11%)

Query: 47   NDNAPRLPMIP-PIQIQAGEARRQIVKI-EATDND--LGVNAEITYSIYHVSNTGLHKFR 102
            NDNAP+         +   +A  Q VKI  ATD D  L  N  I YSI   +  G   F 
Sbjct: 1006 NDNAPKFTSTGYSASVNEDDATPQAVKIVVATDRDSNLNNNNVIEYSITDGNGDGF--FT 1063

Query: 103  IDPRSGVIETTGKLIAGEQYS---ITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVF 155
            I   SG I TTG LI  E Y    + V A D  G     S  + V +S++P  N  +PVF
Sbjct: 1064 IGASSGEIITTG-LIDYESYESFVLEVTAKDKNGGANANSDTSRVTISILP-VNEYTPVF 1121

Query: 156  QQNTYD 161
            Q   YD
Sbjct: 1122 QSLPYD 1127



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 15/118 (12%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-----QYSITVQ 127
           +  TD D+ V  +     Y +S T    F  D  +G++ T   L A        Y++T+ 
Sbjct: 174 VGCTDADVSVTRDDDALYYTISGTNADHFNCDYLTGLVTTARTLEADGGSAILSYTLTLT 233

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ATD GG +    + + VV G N   PVF  + Y  +V+E         T+TV  +ASG
Sbjct: 234 ATDKGGNTDTADLNI-VVNGINDL-PVFSPSGYTASVAE--------ETVTVVSIASG 281


>gi|395504774|ref|XP_003756722.1| PREDICTED: protocadherin gamma-B1-like [Sarcophilus harrisii]
          Length = 806

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 5/113 (4%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V + +N+ D+NDN P     +  I ++    A   ++++ ATD D G NAEITYSI  V 
Sbjct: 221 VEIRINVTDVNDNWPVFSQEVYRISLRENLPAGSSVLQVTATDQDEGNNAEITYSISTVE 280

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV 145
            T  H FR+D +SG I T   L    GE Y+I V+A D GG ++   +++ ++
Sbjct: 281 -TPKHLFRLDAKSGEISTEEVLDFEKGEGYTIGVEAKDGGGHTAHCKIQIEIL 332



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V+  +LDR+     ++   +IA +K     S    LT+ + D+NDN P   + P   
Sbjct: 396 YKLVTDGSLDRE--EIPEYNITLIAIDKGNPPLSTSKILTLQITDVNDNPPVF-LQPSYV 452

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E   +   I  + ATD DL  N  ++YSI    N+ L   ++     V    G + 
Sbjct: 453 VYVPENNPSGVSIACVSATDLDLEENGRVSYSIV---NSDLEPLQLSSYVSVNSHNGHIF 509

Query: 118 AG-----EQ---YSITVQATDTGGKSSQTIVEVSV 144
           A      EQ   + +T+QA D+G  +    V V V
Sbjct: 510 AQRSFDYEQVHTFELTLQAQDSGSPALNANVTVRV 544



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F   + A++    A +  V++ V + D NDNAP +  P + P       +  ++ E    
Sbjct: 522 FELTLQAQDSGSPALNANVTVRVFIVDSNDNAPNILYPALGPDRSALFDMVPRSAEPGYL 581

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           + KI A D D G NA + Y +   ++ GL  F +  R+G + +   L   E  ++ + V 
Sbjct: 582 VTKIVAVDADSGHNAWLAYRVIQATDPGL--FSLGLRTGEVRSARALTDRESVRHRLLVS 639

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTR 151
             D G       V +++V   N +
Sbjct: 640 VQDAGQPPLSATVALNLVFADNLQ 663



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 17/154 (11%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIEA-TDNDLGVNAEITYSIYHVSNT 96
           +T+ ++DINDN PR    I  ++I           +E   D D+GVN+ + Y +   S+ 
Sbjct: 114 ITIMIDDINDNPPRFSRNIIDLEISEIALPGVTFALETPQDPDVGVNSLLQYFLSPDSH- 172

Query: 97  GLHKFRIDPRSG---------VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
               F + P+           V+E +        Y + + + D+G       VE+ + V 
Sbjct: 173 ----FSLLPKENPDGSKYAELVLEKSLDREKQSSYHLVLTSVDSGVPVRSGTVEIRINVT 228

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N   PVF Q  Y +++ E     S+V  +T +
Sbjct: 229 DVNDNWPVFSQEVYRISLRENLPAGSSVLQVTAT 262


>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
 gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
          Length = 3592

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 91/197 (46%), Gaps = 26/197 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 420 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 474

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TG------LHKFRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++ TG      L  FRID RSGV
Sbjct: 475 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIETVTDGTGSTQDQELPIFRIDSRSGV 534

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPNTRSPVFQQNTYDVN 163
           I T   L     + Y + V A+D     S+    T   +  V   N   P F + TY V 
Sbjct: 535 ISTRSSLDRETSDSYHLLVTASDMAAAQSERKTATASVLVKVLDDNDNYPQFSERTYTVQ 594

Query: 164 VSE---GASINSTVATI 177
           V E   G S ++TVA I
Sbjct: 595 VPEDQWGGSEDNTVAHI 611



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 660 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 719

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T  +L   EQ  ++  V A D G  
Sbjct: 720 DSDEGPNAEITYSISERDDN--FPLAVDPRTGWVQTIKQLDREEQSRFAFQVVAKDGGVP 777

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 778 PKSASSSVVITVQDV---NDNDPTFNPKYYEANVGEDQPQGTPVTTVTAT 824



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 12/172 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 869  RFLLTVTATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 926

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+G+NA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 927  TDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 986

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G    S  T VE+SV    N  +PVF+   Y  ++ E A + ++V  ++ S
Sbjct: 987  GGSPSLSDTTDVEISVT-DVNDNAPVFKNPLYQSSILEDALVGTSVIQVSAS 1037



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 19/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V + + LDR+     +F FQV+A++      S   S+ + + D+NDN    P   P   
Sbjct: 750 WVQTIKQLDRE--EQSRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PTFNPKYY 804

Query: 62  QA--GEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIET 112
           +A  GE + Q   +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  
Sbjct: 805 EANVGEDQPQGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQ 860

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
           +      +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +
Sbjct: 861 SLDYKQEKRFLLTVTATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGT 919

Query: 173 TVATITVS 180
           TV  ++ +
Sbjct: 920 TVLVVSAT 927



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + +++ D+NDNAP    P+     
Sbjct: 964  IVTNAPLDRE--TTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSI 1021

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            ++       ++++ A+D D+G+N  I Y +    +     F IDP SG + T   L   +
Sbjct: 1022 LEDALVGTSVIQVSASDPDIGLNGRIKY-LLSDRDVEDGSFVIDPTSGTVRTNKGLDRES 1080

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +T  A D G     + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1081 VAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEI 1140



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 412 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 469

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 470 EAEQFEASIREGATVGSTVITL 491



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 534 VISTRSSLDRETSD--SYHLLVTASDMAAAQSERKTATASVLVKVLDDNDNYPQFSERTY 591

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 592 TVQVPEDQ-WGGSEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 648

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 649 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 705


>gi|348503596|ref|XP_003439350.1| PREDICTED: cadherin-18 [Oreochromis niloticus]
          Length = 796

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 17/151 (11%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDNAP+ P  P     P   + G +  Q+   +A D   G +A I YSI   
Sbjct: 146 FIIKVQDINDNAPKFPDGPFVASVPEMSEVGTSVLQVTATDADDPTYGNSARIVYSILQ- 204

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F +DP++G+I T    +   A E Y++ +QA D     GG S  T + +++  
Sbjct: 205 ---GQPYFSVDPKTGIIRTALANMDREAREHYTVVIQAKDMAGQVGGLSGSTTINITLT- 260

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N   P F Q  Y + V E A +   V  I
Sbjct: 261 DVNDNPPKFPQKNYQLYVPESAQVGKPVGKI 291



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 35/195 (17%)

Query: 8   NLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPP 58
           N+DR+     +  + V+  A++  G    +  S T+N  L D+NDN P+ P     +  P
Sbjct: 224 NMDRE----AREHYTVVIQAKDMAGQVGGLSGSTTINITLTDVNDNPPKFPQKNYQLYVP 279

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTG 114
              Q G   + + KI+A D DLGVNA+I YSI  +++ G + F I    D R G+I    
Sbjct: 280 ESAQVG---KPVGKIKANDEDLGVNADIRYSI--INSEGANMFSISADRDTREGIISLKK 334

Query: 115 KLIAGEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
            L    +  Y++ ++  +T         G       ++++V  G    +PVF  + Y ++
Sbjct: 335 PLNFERKKTYTLNIEGVNTHVDPRFSYLGSFKDTATLKITV--GDVDEAPVFSMDYYIMD 392

Query: 164 VSEGASINSTVATIT 178
           V E +   + V  +T
Sbjct: 393 VYENSPSGTEVGAVT 407


>gi|332821712|ref|XP_003310818.1| PREDICTED: cadherin-18 isoform 2 [Pan troglodytes]
          Length = 574

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|327276773|ref|XP_003223142.1| PREDICTED: cadherin-18-like [Anolis carolinensis]
          Length = 790

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREKKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAKV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 31/194 (15%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   + G A   + KI+A D D G NA++ YS+ +   +G+     D   R G+I     
Sbjct: 278 PESAKVGSA---VGKIKANDADTGSNADMKYSVINGDGSGVFTISTDKETREGIISLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G    +PVF   +Y ++V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDVTMLKIIV--GDVDEAPVFTLPSYIMDV 392

Query: 165 SEGASINSTVATIT 178
            E A I + V T+T
Sbjct: 393 HENARIGTIVGTVT 406


>gi|61162140|dbj|BAD91058.1| At-cadherin [Achaearanea tepidariorum]
          Length = 2971

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 77/172 (44%), Gaps = 16/172 (9%)

Query: 16  PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----RQIV 71
           P  +   V A E  G   S  V LT+ + D+NDNAPR  + P  Q    +        I+
Sbjct: 604 PKSYSLIVTATEDSG-GFSTSVELTIKVTDVNDNAPRFEL-PDYQAHNVDEDVAVGTSIL 661

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
           ++ A+D D   NAEI YS+          F ID + GVI +  +L A     Y +TV+AT
Sbjct: 662 QVSASDMDQNKNAEIEYSL------DKEDFTIDNK-GVIYSNKRLDADINNTYVLTVRAT 714

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           D G         V +     N   P F Q+ Y  NV E A  N+ V T+  S
Sbjct: 715 DRGDPPLTGTATVRIYTENKNDEPPKFSQDVYTPNVDENAGPNTLVTTVVAS 766



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 9    LDRDPPN-PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            LDRD P+   ++RF V A ++ G        + VNL DINDN+P  P  +      + G 
Sbjct: 1468 LDRDLPHGRSQWRFTVFAEDEGGNGLVGYADVLVNLKDINDNSPFFPYAIYTGNVTENGT 1527

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            A   ++ + ATD D    G+NA + YSI    V+  G   F ID  +GVI T    +  E
Sbjct: 1528 AGMTVMTMTATDYDDPNEGMNARLKYSIEQNQVNENGELIFTIDEETGVISTAVCCLDRE 1587

Query: 121  ---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
               +Y+I V A D GG        +  +   N   P F +  + V V E
Sbjct: 1588 TNPEYTIKVVAMDGGGLKGTGTATIK-IKDINDMPPEFTKKEWQVEVDE 1635



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 20/194 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE-----KQG--TAASVPVSLTVNLNDINDNAPRLP 54
           L+     LD+D     K+   V AR+     K G  T  +    + V + D+NDN P   
Sbjct: 798 LISGHIQLDKD-----KYELNVTARDDGACCKNGALTTHTSTALVVVFITDVNDNKPLFE 852

Query: 55  MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
                  Q  E      Q++K++A DND G N ++ YSI    N    KF +D  +G I 
Sbjct: 853 ECSTYAPQVEEGAPSGTQVIKVKAIDNDKGHNGQVRYSIVQQPNQKGTKFIVDEVTGDIR 912

Query: 112 TTGKLIA----GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           T          G   S+TV+ATD G    + +    V +   N   P+F +  Y  NV +
Sbjct: 913 TNKVFDREGDDGRFVSVTVKATDRGNPPLEGVCSFKVEITDINDNPPLFDRQEYRENVKQ 972

Query: 167 GASINSTVATITVS 180
                + +  ++ S
Sbjct: 973 DTPKGTNILRVSAS 986


>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
          Length = 4144

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 29/190 (15%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---- 56
            + + SK+ LDR+  +  K+  +V   + +  A++    + V + DINDN+P+   I    
Sbjct: 2959 WKISSKKPLDRE--DIEKYFLRVTVSDGKFQAST---QVEVFVLDINDNSPKCRQILYTG 3013

Query: 57   ------PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                  PP           I+++ A D D GVNA++TYS++     G  +FR+DP +G +
Sbjct: 3014 RVAEDVPPGHF--------ILQVSAVDADAGVNAQVTYSLH---GPGADEFRLDPYTGEL 3062

Query: 111  ETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             T   L   E+  Y +  +ATD GG+S Q  V +  V   N  +P F  +   V V +  
Sbjct: 3063 FTLTALDREEKDRYHLVAKATDGGGRSCQADVILG-VDDVNDNAPRFTISHCSVVVFDNT 3121

Query: 169  SINSTVATIT 178
            ++ + VA ++
Sbjct: 3122 TVKTPVAVVS 3131



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 9/167 (5%)

Query: 19   FRFQVIAR-EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
            ++  V+A    Q T     VS+ + + D+NDN P     P     ++       ++++ A
Sbjct: 2758 YQLDVMAHCSHQETELVSLVSVNIQVKDVNDNQPVFEADPYKAFLMENMPVGTTVIQVTA 2817

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
             D D G + ++TYS+   S+     F ID  SG I T  +L   A E Y   V A+D G 
Sbjct: 2818 NDQDTGSDGQVTYSLAAESDWVGELFAIDRESGWITTRKELDCEARETYQFHVVASDHGR 2877

Query: 134  K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                SSQ +VEV+ V   N  +P F    Y  +V E +     +AT+
Sbjct: 2878 TIQLSSQALVEVT-VSDENDNAPRFTSEVYRGSVIENSEPGQLIATL 2923



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 13/190 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI--PPI 59
            + V K +LD     P +    ++ R+++       V +T+ + D N + P    +     
Sbjct: 1501 VTVGKLDLDS---GPSQHILTIMVRDQEVPIKRNFVWVTIRVEDSNAHPPHFASLHYEAT 1557

Query: 60   QIQAGEARRQIVKIEATDNDLGVN-AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             + +     +++++ A   D GV+ A++ YSI   ++     F ID  SGVI    KL  
Sbjct: 1558 TLDSAAPGTEVLQVRALVEDHGVSSAQVHYSIQAGNDESF--FSIDQLSGVITVARKLNQ 1615

Query: 119  GEQ--YSITVQATDTGGKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +Q  +S+TVQATD      Q  T+V + + P  +T  P F +  Y V + E A+I S +
Sbjct: 1616 SKQDGFSLTVQATDGSAPQLQDSTVVNIHIAPSDHT-PPRFSKEEYFVEIRESAAIGSPL 1674

Query: 175  ATITVSRLAS 184
              ++ + L++
Sbjct: 1675 TLVSATSLSA 1684



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 58/237 (24%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS------------------------ 38
            V+  +  D+D  + GK  F +I+  + G  A  P++                        
Sbjct: 1151 VLQLDAWDQDSSSKGKLTFHIISGNQHGNFAIDPITGLLSTSRQLDRENKAEHILEVAVM 1210

Query: 39   ------------LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATD 77
                        + + + D+NDN P         RLP     +   G     + ++ A+D
Sbjct: 1211 DNGEPGLQSTSRVVIQVLDVNDNHPAFSHKLFKVRLP-----ERSNGRVFEPLYRLVASD 1265

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----G 133
             D G N +ITYS+   ++ G   F I P +GV+ ++     GE   +TV+ATD G     
Sbjct: 1266 RDEGPNGQITYSLEE-NDEG--NFSIHPTTGVVYSSRVFPIGEYNILTVKATDGGRPPLS 1322

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
             S +  +E    PGP++    F +  ++  V E   +N  V  I+ + + SG    N
Sbjct: 1323 SSVRLHIEWIPWPGPSSEVLAFDEPHFNFAVMETDPVNHMVGVIS-TEVQSGLLWFN 1378



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 9/170 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPI 59
            + + + LDR+         +++AR+  G  A   V +   L D+NDN P+         +
Sbjct: 2532 ITTLQELDRENSTERVIAIKIMARDGGGKVAFCTVKII--LTDVNDNPPQFKASEYTVSV 2589

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            Q   G+    ++++ A D D G+NA++TYS+  + +       I+P +G+++    LI  
Sbjct: 2590 QSNVGKGA-PVIQVLAYDADEGLNADVTYSVDSLEDLEEEVIEINPATGMVKVRESLIKL 2648

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
            E   +   ++A D G     ++V + +   P+  S P F +  Y  + SE
Sbjct: 2649 ENRAFDFNIRARDGGTPQRDSLVPLRLQVAPSGVSLPKFSEPLYTFSASE 2698



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 15/162 (9%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLG 81
            K  ++ S  +++ +N+ D+ND+ P+       ++ + + R        I+ + A D D  
Sbjct: 3291 KGASSLSDVMTVVINVTDVNDHEPKFTQ----ELYSTDIREDAAVGETILTLTAVDEDGP 3346

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTI 139
            +N+ +TYS+      G   F I P+ G I     L   E   Y +TV+ATD G  +    
Sbjct: 3347 MNSNVTYSLVGGDPQG--HFAIHPKRGEIHVARPLDWEETPSYHLTVRATDNGQPALWRD 3404

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              VS+ V   N   P F Q  Y + V E A + ++V  +TVS
Sbjct: 3405 GAVSIHVADVNDNPPRFFQLNYSIVVQESAPLGTSVLELTVS 3446



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 14/144 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
            LDR+     K R+ ++A+   G   S    + + ++D+NDNAPR  +     +       
Sbjct: 3068 LDREE----KDRYHLVAKATDGGGRSCQADVILGVDDVNDNAPRFTISHCSVVVFDNTTV 3123

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSI 124
            +  +  + A D D G NA++TYS+   +N+   +F ++  +GVI  E   K +      +
Sbjct: 3124 KTPVAVVSARDPDEGPNAQVTYSL---TNSADGRFSVEATTGVIRLEKALKDMDHSVLEL 3180

Query: 125  TVQATDTGGK---SSQTIVEVSVV 145
             VQA D G     S+ + V VSVV
Sbjct: 3181 VVQAADQGDPYPLSTLSTVTVSVV 3204



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 15/136 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V + D NDN P    +P     P     G+    + ++ ATD DLG N  +TY    
Sbjct: 2050 TVRVRVEDANDNRPTFENLPYFTSVPEGTDPGDV---VFQVSATDRDLGANGTVTYGF-- 2104

Query: 93   VSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
                    FRIDP  G I     L   A  +Y + V A D G    QT  EV V+   N 
Sbjct: 2105 --AEDYQYFRIDPYLGDISLRKPLDYRALNKYLLKVIARDGGDPPLQTEGEVLVLLR-NK 2161

Query: 151  RSPVFQQNTYDVNVSE 166
             +P+FQ   Y V V E
Sbjct: 2162 SNPLFQSLRYRVKVPE 2177



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSIT 125
           ++ + ATDND G N  +TYSI +  +     F IDP SG+I +T KL+  E     Y   
Sbjct: 474 VLTVTATDNDSGENGFVTYSIAYPKSV---PFSIDPYSGII-STSKLMDYELMQRLYHFQ 529

Query: 126 VQATDTGGKSSQ-TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           V A+D G    Q T V +S+ +   N  SP+F++      +     +   VAT++
Sbjct: 530 VWASDWGSPFRQETEVSISLMLNNLNDNSPMFEKANCSGTIPRDLQVGEQVATMS 584



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 5/145 (3%)

Query: 38   SLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P     +    +  G  A   ++++ A D D G N  ++Y I    +
Sbjct: 2252 TVHVEVEDINDNPPVFSQTVYTASVSEGLPAHTPVIRLLAADRDSGRNGAVSYQIVEDGS 2311

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
                 F++D R+G + T  +L      Q+ + V A D G  + S   + V  V   N   
Sbjct: 2312 DASEFFQVDGRTGQMATARELDYELRRQFRVKVSAADDGEPALSSEALVVVQVVDVNDNP 2371

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F+Q  Y+ NVSE A+    V  +
Sbjct: 2372 PEFRQPQYEANVSELATCGHLVLKV 2396



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 39   LTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V L D+NDN+PR +P +  +++ +       ++ +EA D D G   E+ Y++    + 
Sbjct: 906  VVVTLEDVNDNSPRCIPQLNRLKVPEDAPPGTLVLFLEAFDPDAGPGGEVKYALV---DN 962

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVV 145
                F++D  +G +    +L    +  Y++TV+A+D G    +SS   VEVSV+
Sbjct: 963  AQGTFQVDKWTGAVTLERELNFETRALYNLTVEASDGGKPLSRSSTCYVEVSVL 1016



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)

Query: 33   ASVPVS----LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEI 86
             SVP+S    + + + D+NDN P++  P+  P   +       +++++A D D     ++
Sbjct: 1108 GSVPLSAVTEVFIEVTDVNDNPPQMSRPVFYPSVREDAPLNTSVLQLDAWDQDSSSKGKL 1167

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV 144
            T+ I  +S      F IDP +G++ T+ +L      ++ + V   D G    Q+   V +
Sbjct: 1168 TFHI--ISGNQHGNFAIDPITGLLSTSRQLDRENKAEHILEVAVMDNGEPGLQSTSRVVI 1225

Query: 145  -VPGPNTRSPVFQQNTYDVNVSE 166
             V   N   P F    + V + E
Sbjct: 1226 QVLDVNDNHPAFSHKLFKVRLPE 1248



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 5/83 (6%)

Query: 100  KFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
            KFR++ R+G +   G L   ++ E Y ++++ +  G  S   ++ V + V   N   P F
Sbjct: 3258 KFRLNSRTGSLYVNGSLDFEVSHEHY-LSIECSRKGASSLSDVMTVVINVTDVNDHEPKF 3316

Query: 156  QQNTYDVNVSEGASINSTVATIT 178
             Q  Y  ++ E A++  T+ T+T
Sbjct: 3317 TQELYSTDIREDAAVGETILTLT 3339



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            ++   A D D G + E+ Y +     TGL  F ID  +G I T G L       Y +TV 
Sbjct: 1046 VMTAAAQDPDPGRDGELQYFLR--EGTGLATFSIDHETGTIRTVGPLDRERTPHYWLTVL 1103

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G      + EV + V   N   P   +  +  +V E A +N++V  +
Sbjct: 1104 AVDLGSVPLSAVTEVFIEVTDVNDNPPQMSRPVFYPSVREDAPLNTSVLQL 1154



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 20/169 (11%)

Query: 19   FRFQVIAREKQGTAASV---PVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQI 70
            F F V  R+ QG        P  +TV + D+ND  P        +   + +  G    ++
Sbjct: 1831 FHFSVHVRD-QGNPVLFSPEPAKVTVVVRDVNDCPPVFSEAVYALTALLPVHRG---MEL 1886

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
            +K+ A D D    + +TYSI        H   I P SG+I        G    +TV+A D
Sbjct: 1887 LKVLANDAD----SPVTYSI--TGGNADHALAIHPHSGLISVNDATQLGGSRELTVRAGD 1940

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             G   S  +V V++   P T S  F ++ Y   V E + +   +  + V
Sbjct: 1941 -GFYKSTALVRVNLTEAPIT-SLRFDRDEYTAAVKENSGVAQALVILGV 1987



 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+   G L   A  ++  TV+ATDT  G  S+  V V V    N   PV
Sbjct: 2208 LALFMADFKTGVLSVIGPLDYEAKAEHVFTVRATDTALGSFSEATVHVEV-EDINDNPPV 2266

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG   ++ V  +  +   SG
Sbjct: 2267 FSQTVYTASVSEGLPAHTPVIRLLAADRDSG 2297



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 14/99 (14%)

Query: 39  LTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           L VN+ D NDN PR P     +  P   Q G     ++++ A D D   N ++ Y++   
Sbjct: 801 LAVNVGDANDNVPRFPPGGYRVRIPEDTQPGTT---VMRLRADDADKEDNGKVRYALLTP 857

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
           S+    KF +   +G +  TG L   +  +Y +TV+A D
Sbjct: 858 SD----KFSVHAVTGELVVTGSLDRESWPRYVLTVEARD 892



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +R I  + ATD DLG NA      Y+  N     F + P SG +  TGKL A
Sbjct: 167 KRTICTVSATDADLGQNA----GFYYAFNPRSELFAVHPTSGAVTVTGKLSA 214


>gi|444713161|gb|ELW54069.1| Protocadherin alpha-2 [Tupaia chinensis]
          Length = 560

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 12/165 (7%)

Query: 37  VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HV 93
           + + + + D+NDN P    P+     ++       +VK+ A+D D G N+EI YS+   V
Sbjct: 197 LQILIQVLDVNDNEPSFAQPVYRVKLLENAPNGTLVVKLNASDADEGSNSEIVYSLSSDV 256

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +T   KF+IDP SG I T  KL   E   Y I V A+D G  S     ++SV +   N 
Sbjct: 257 YSTTQTKFKIDPSSGEIRTNAKLDYEENKSYEIQVVASDKGTPSMSGHCKISVKLVDIND 316

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAIM 189
            +P     +  + + E A + + +A ITVS   SG      C++M
Sbjct: 317 NTPEIAITSLSLPIQEDAPLGTVIALITVSDRDSGTNGQVTCSLM 361



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QV+A +K   + S    ++V L DINDN P + +     PIQ  A      I  I  
Sbjct: 287 YEIQVVASDKGTPSMSGHCKISVKLVDINDNTPEIAITSLSLPIQEDAPLG-TVIALITV 345

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D G N ++T S+  HV    +  F+ +  S V+++     +   Y++ V A D G  
Sbjct: 346 SDRDSGTNGQVTCSLMPHVPFKLVSTFK-NYYSLVLDSALDRESISDYTVVVTARDGGSP 404

Query: 135 SSQTIVEVSV-VPGPNTRSPVF----QQNTYDVNV 164
           S      VS   P  ++R+ V     +    DVNV
Sbjct: 405 SLWATASVSAEAPKASSRAMVGAAGPESTLVDVNV 439



 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 15/156 (9%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  PM +  I+            +E A+D D+GVNA ++Y +       L
Sbjct: 92  VEVKDINDNPPIFPMAVKTIRFHESRLLDSRFPLEGASDADIGVNALLSYKLSSSEFFFL 151

Query: 99  HKFRIDPRSGVIE-TTGKLIAGEQYS---ITVQATDTGGK-----SSQTIVEVSVVPGPN 149
                D  S  +    GK +  E+ +   + + ATD GGK     + Q +++V  V   N
Sbjct: 152 DVQTNDELSQSLSLVLGKSLDREETAEVNLLLVATD-GGKPELTGTLQILIQVLDV---N 207

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              P F Q  Y V + E A   + V  +  S    G
Sbjct: 208 DNEPSFAQPVYRVKLLENAPNGTLVVKLNASDADEG 243


>gi|327270431|ref|XP_003219993.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
          Length = 928

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 7/154 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V + V++ DINDN P+ P     + ++    +  +V +++A D D G NA+ITYS + VS
Sbjct: 200 VKINVSILDINDNFPQFPQTEYKVILKENSPQGTLVSRVKAVDMDFGSNAKITYSFHQVS 259

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
               + FR++  +GVI T  + I  E+   Y + ++ATD GG S    V V  V   N  
Sbjct: 260 EKTQNLFRLNKDTGVI-TVWEEIDYEKECSYDMNIKATDGGGLSGLCKVLVQ-VEDMNDN 317

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P     +    + E +++NS VA  +V+   SG
Sbjct: 318 APEISVLSLKNIIREDSALNSVVALFSVTDRDSG 351


>gi|348544967|ref|XP_003459952.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
          Length = 1540

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 15/160 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG--- 64
            LDR+  +   +  QV+A ++     S    L   + D NDN+P+ P IP P+ I  G   
Sbjct: 885  LDRETKD--SYLLQVVAVDQVTNGLSSTAELNFTILDYNDNSPQFPSIPDPLMIIEGNYS 942

Query: 65   -EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQ 121
             E+  +I  I  TD DLG+N E+T S+  +S   L +FR D   G +   G L     E 
Sbjct: 943  KESPGEIFTITPTDADLGLNGEVTLSL--ISPHPLFRFRED---GTLLAIGPLDRENRET 997

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV+A D G    +    + V +   N   PVF  + Y
Sbjct: 998  YDLTVKALDKGNPPRENFTSIRVSLADLNDNKPVFSSSDY 1037



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 13/179 (7%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQ 62
           +K  LD D   P  +  ++   +  GT++   V + + + DINDN+P      +    ++
Sbjct: 570 TKVKLDHDE-GPQNYSVEITITD--GTSSDTAV-VEIQVTDINDNSPVFSSSSVTKSVLE 625

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGE 120
             E    +  + ATD D G N EI YS+      G   F IDP SG++   G L      
Sbjct: 626 DAEVGFNVTAVPATDKDSGFNKEIRYSL----RGGEGSFSIDPVSGMVSLAGALDRETKA 681

Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +YS+ V A D G  +      ++V V   N  +P F    Y V + E  S+ +++ T++
Sbjct: 682 EYSLLVVAEDQGRPARSATATLTVQVSDINDNTPKFSVAEYQVEILETESVGASLLTLS 740



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 14/173 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++   V+A ++   A S   +LTV ++DINDN P+   +   Q++  E   
Sbjct: 675 LDRE--TKAEYSLLVVAEDQGRPARSATATLTVQVSDINDNTPKFS-VAEYQVEILETES 731

Query: 69  ---QIVKIEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
               ++ + A D D  VN  +TYSI+  S +T    F ++  +G++     L   E   Y
Sbjct: 732 VGASLLTLSALDPDESVNGIVTYSIFQQSPSTDPAVFDLELSTGILRLVQPLDYSEVNMY 791

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASI 170
           ++ VQATD G  S      V V +   N   P F +  Y + V E    GASI
Sbjct: 792 TLKVQATDGGTPSLVGNGSVVVKIKDENNNPPEFSKEIYHMPVYENLPGGASI 844



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 19/181 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI-------- 70
           + F V A++K+G   +   S+ +N++D ++  P          QA  +  Q+        
Sbjct: 184 YHFTVTAKDKEGLNDTA--SVVINVDDFDNLNPYFSHS---LYQAFISENQLGLFYTIQP 238

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL----IAGEQYSIT 125
            +I+A D D+G+N  +TY+I  VS     + F  DP SGV+          +     SIT
Sbjct: 239 EEIKAQDGDIGINMTLTYTISGVSPDKYQRNFNTDPSSGVLSVIAAFDREEMNSSMISIT 298

Query: 126 VQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           ++A  T     +   V    V   N  +P F + +Y V + E + +++ +   +V+ L  
Sbjct: 299 IKAAQTDDSMKTTETVVSVTVEDVNDNAPEFDEPSYSVTLLENSPVDAVLFKASVTDLDQ 358

Query: 185 G 185
           G
Sbjct: 359 G 359



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 16/190 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGE 65
            LDR+  N   +   V A +K         S+ V+L D+NDN P       +  I ++  E
Sbjct: 990  LDRE--NRETYDLTVKALDKGNPPRENFTSIRVSLADLNDNKPVFSSSDYVSTILLKDAE 1047

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK---LIAGEQY 122
              + ++ + ATD D G N+ ITYS    S  G     ++ ++G +  T K   L      
Sbjct: 1048 EGKLLLTLSATDRDTGNNSLITYSF---SGEGSPYLDLNTQTGNVTLTSKFADLTEDTTL 1104

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +T  ATD G    S+   V V++     T +  F   +Y+ ++ E       V  +T S
Sbjct: 1105 VLTAVATDHGQSPLSTTARVVVNLKISSLTENVAFLSFSYNFSLPENQEAGVLVGKVTAS 1164

Query: 181  RLASGCAIMN 190
               SG  + N
Sbjct: 1165 ---SGSNLYN 1171



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 13/173 (7%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDL 80
           V ARE+          +TV L D NDN P+    M              +V++ A D D+
Sbjct: 382 VEAREQHEPNNVATTQVTVTLLDENDNIPKFTSGMYEGKVFANQTEGLLLVQVRAEDPDV 441

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKS 135
            VN +I YSI   ++ G   F ID  +G I T  K I  +     ++ + V A D G   
Sbjct: 442 DVNGQIAYSIDFGNSRGY--FTIDENTGEI-TLAKTIPLQENQILEFPLYVTAKDGGVIP 498

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
             +  +V++   P    P F Q  Y   + E       VA + V+ LA   AI
Sbjct: 499 RSSSAQVNIF-APGDSKPQFLQKLYHFTIEEEQ--EPGVAVLKVNYLAVYPAI 548



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + +K  LD++         +V+      T+A   V   V + D+N++    P  PP    
Sbjct: 1191 IFTKAQLDKEQQEWYFLEVEVVDTRNPPTSAMTTVR--VQVEDVNES----PHFPPEVYS 1244

Query: 63   A-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKL 116
            A        +  +++++A+D D+G   ++ YS+   S      F +DP SG++   +   
Sbjct: 1245 ASVFSIAPYKTPVIQVKASDPDVGDVGQLVYSLTAES----PYFDMDPSSGLLYVISATE 1300

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSV 144
            +AG+   + V+ATD     +  IVEV V
Sbjct: 1301 LAGQTAKMEVKATDPHDLHATAIVEVMV 1328


>gi|336244971|gb|AEI28403.1| FAT tumor suppressor-like protein 4, partial [Carettochelys
           insculpta]
          Length = 254

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 14/183 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
           LDR+      ++ +V+A    G A +   ++ + + D+NDN+P  L  +  + + +  +A
Sbjct: 65  LDREEQ--AFYQLKVVAS---GGAITGDATVNIIVKDLNDNSPHFLHAVESVNVVENWKA 119

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSIT 125
              I + +A D D GVN  I+YS+   +  GL  F I+ ++G I  TG L I    Y + 
Sbjct: 120 GHTIYQAKAVDPDEGVNGMISYSLKQ-NPKGL--FTINEQNGAISLTGLLDINAGSYQVE 176

Query: 126 VQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           + A+D G    SS  I+ VSV    N  +PVF Q +Y+V++SE   +NS    +  S   
Sbjct: 177 ILASDMGVPQHSSSFILTVSV-HDVNDNAPVFDQLSYEVSISESEPVNSRFFKVQASDKD 235

Query: 184 SGC 186
           SG 
Sbjct: 236 SGA 238



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)

Query: 15  NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
           N G ++ +++A +      S    LTV+++D+NDNAP    +   + I   E    +  K
Sbjct: 169 NAGSYQVEILASDMGVPQHSSSFILTVSVHDVNDNAPVFDQLSYEVSISESEPVNSRFFK 228

Query: 73  IEATDNDLGVNAEITYSIYHVSNTG 97
           ++A+D D G N EI YSI    NTG
Sbjct: 229 VQASDKDSGANGEIAYSIIE-GNTG 252


>gi|332228099|ref|XP_003263229.1| PREDICTED: cadherin-18 isoform 2 [Nomascus leucogenys]
          Length = 574

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|262263292|tpg|DAA06592.1| TPA_inf: protocadherin beta 15 [Anolis carolinensis]
          Length = 810

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 7/154 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V + V++ DINDN P+ P     + ++    +  +V +++A D D G NA+ITYS + VS
Sbjct: 222 VKINVSILDINDNFPQFPQTEYKVILKENSPQGTLVSRVKAVDMDFGSNAKITYSFHQVS 281

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
               + FR++  +GVI T  + I  E+   Y + ++ATD GG S    V V  V   N  
Sbjct: 282 EKTQNLFRLNKDTGVI-TVWEEIDYEKECSYDMNIKATDGGGLSGLCKVLVQ-VEDMNDN 339

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +P     +    + E +++NS VA  +V+   SG
Sbjct: 340 APEISVLSLKNIIREDSALNSVVALFSVTDRDSG 373


>gi|291239053|ref|XP_002739439.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
            kowalevskii]
          Length = 3169

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LD +  +  ++ F  +A ++     +   S+ + L DINDNAP    P+      +  E 
Sbjct: 853  LDFEEDDSRRYAFFALAVDQGEPGLTSTASIKIQLVDINDNAPIFTEPVYYGNVDENAET 912

Query: 67   RRQIVK---IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK----LIAG 119
               ++    IE TD D G NA++ Y++   +     +F ID  +G+I TTG     ++  
Sbjct: 913  GTTVIMKRYIETTDADAGRNADVLYTL---TGNDSDQFHIDANTGIITTTGDDVTPILDR 969

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E+   Y + V A D G  +S   + ++V    N  +P+F++  Y  NVSE A++ +TV  
Sbjct: 970  EKISLYHLVVTAHD-GTHNSTVPINITV-NDVNDNAPLFEEAVYHFNVSEDATVGTTVGL 1027

Query: 177  ITVSRLASG 185
            +    + +G
Sbjct: 1028 VVAQDMDTG 1036



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 11/178 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIPPIQI--QA 63
            LD D     ++  +VI  ++ G    + +  VSLT+ L D+NDN P+        +  + 
Sbjct: 1921 LDLDREERDRYDLEVIVSDRDGVDDLSLNSSVSLTIVLRDVNDNYPQFTKDEYYYVIWEN 1980

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
              +  +I  I ATDND G NA I+++I H    G   F+I+  +GV+     L      +
Sbjct: 1981 TPSGYEIDVINATDNDSGNNAIISFAI-HSGADGY--FKINRNNGVLSVADTLDREYKAK 2037

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y IT+ A+D G     T +E+ + +   N   P F QN Y     EG +  ++V  +T
Sbjct: 2038 YVITISASDHGVPILTTYIEMVIELLDVNDNQPTFTQNAYRAQQEEGVATGTSVLRVT 2095



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 22/182 (12%)

Query: 14   PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-------QAGEA 66
            P  G     ++A ++     +   S+ + + D+NDNAP      P+           G  
Sbjct: 1057 PVSGAVFVLILATDRGKPTLTSSASIKIQVVDVNDNAPSFT--EPVYYGDIDENSATGTT 1114

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-------G 119
               I  I+ATD+D G+NA I Y+I   +    ++F+ID  +G+I TT   I         
Sbjct: 1115 VTMIPCIDATDSDAGLNASIVYTI---TGEDSNQFQIDSITGIITTTDNEIVLNLDREDK 1171

Query: 120  EQYSITVQATDTGG--KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            + Y + V A+D  G  +S  +IV + + +   N  +P+F ++ Y  +VSE   +  +V+ 
Sbjct: 1172 DVYQLVVTASDRNGLNESLSSIVPIIITINDVNDNAPIFDESYYYFSVSEDRHVGYSVSY 1231

Query: 177  IT 178
            ++
Sbjct: 1232 VS 1233



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 16/144 (11%)

Query: 39  LTVNLNDINDNAPRLPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +T+++ DINDN+P       I  I+ ++      ++ + ATD+D   NA++ YSI     
Sbjct: 462 VTIDILDINDNSPVFSFDLYIGSIE-ESAPLDSYVLTVRATDDDEETNADVIYSI----- 515

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ-----YSITVQATDTGGKSSQTIVEVSVVPGPNT 150
                F ID  +G + T  +    E      +   V ATD G  SS ++V V ++   N 
Sbjct: 516 -NSTDFVIDTVTGDVTTASQDFDFEDANARSFEFAVTATDCGNLSSTSVVRVQILDS-ND 573

Query: 151 RSPVFQQNTYDVNVSEGASINSTV 174
            +PVF +N Y   + E +   +TV
Sbjct: 574 NAPVFTENDYFGYIDENSVSGTTV 597



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 10/183 (5%)

Query: 10  DRDPPNPGKFRFQVIA--REKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
           D D  N   ++  V A  R+ Q  + S    +T+ +ND+NDN+P           ++  +
Sbjct: 645 DLDRENVSSYQLVVTAYDRDAQNGSRSSSAPITILVNDVNDNSPMFQNTFFNFTVMEDTD 704

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYS 123
               I    A D D+G+N+ +TY+   V + G  KF ++  SG I    +L   E  +Y 
Sbjct: 705 VGNIIGHAIAEDVDIGINSRLTYT---VVSGGEGKFDVNSESGAIFILSQLDREETARYV 761

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           + +  +D+G    +   +V + +   N  SP+F  + Y V V E  +  + + T+T +  
Sbjct: 762 LNMSVSDSGIDILRDFTKVEIHLLDVNDNSPMFDSDNYLVEVEEELTSGTYLFTVTATDP 821

Query: 183 ASG 185
            +G
Sbjct: 822 DAG 824



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 15/171 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVP--VSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            NLDR+  +   ++  V A ++ G   S+   V + + +ND+NDNAP             E
Sbjct: 1165 NLDREDKD--VYQLVVTASDRNGLNESLSSIVPIIITINDVNDNAPIFDE-SYYYFSVSE 1221

Query: 66   ARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGE 120
             R     +  + A D+D+G+N+ ++Y +      G   F +DP +G I     L      
Sbjct: 1222 DRHVGYSVSYVSAYDDDIGINSRLSYFVID----GDGSFGVDPINGTISVLSPLNREITH 1277

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
              ++TV   D G        +V + +   N  +PVF    Y  NV+E ASI
Sbjct: 1278 NSTLTVLVVDGGEDILCDTAKVRIKILDVNDNAPVFDSELYLANVTEKASI 1328



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 13/114 (11%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-------GEQYSIT 125
           IEATD D+  N+ I YS+   S  G + F+ID  +G+I+T     A          Y I 
Sbjct: 389 IEATDADINDNSAIVYSL---SGDGSYHFQIDELTGIIKTVDNNTALNLDREVRSSYVIN 445

Query: 126 VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + A DTG     S T+V + ++   N  SPVF  + Y  ++ E A ++S V T+
Sbjct: 446 ISAYDTGNPVLESYTVVTIDILD-INDNSPVFSFDLYIGSIEESAPLDSYVLTV 498



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            + F V A +  G        + + +NDINDN P     P  + +  E         ++ +
Sbjct: 2344 YSFSVSASDIDGIKYDAYSLVNILVNDINDNNPIFDR-PSYRGEVYERDYSTSPTAVLTV 2402

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             A D D G NAEI YSI  V + G  +F ID  +G I   G +   E   Y++TV ATD 
Sbjct: 2403 VAIDADTGPNAEIMYSI-TVGHNG--EFYID-LNGTIYAVGNVDREEVPLYTLTVTATDN 2458

Query: 132  GGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSE 166
            G +   + V V  +V   N  +P F Q  Y+ +V E
Sbjct: 2459 GVQPQSSTVSVDIIVTDINDNTPTFTQRHYNGSVEE 2494



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 18/178 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIVK 72
            +   V A +      S  VS+ + + DINDN P        +   G          +IV 
Sbjct: 2449 YTLTVTATDNGVQPQSSTVSVDIIVTDINDNTPTFTQ----RHYNGSVEENVQYYIEIVH 2504

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE-TTGKLIAGE---QYSITVQA 128
            + ATD D G NA++ Y+I  VS      F I+  SG+I  TT  +I  E    Y + V  
Sbjct: 2505 VIATDADEGTNADVYYTI--VSGDD-GNFEINLYSGIIAPTTNAVIDYETKSHYILRVLV 2561

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             D G  + + +  V + V   N  +P F    YD  V   A +NSTV T+      SG
Sbjct: 2562 EDAGFHALRNVTSVHIEVIDVNDNAPYFIGEPYDAEVPVTADLNSTVFTVVAEDADSG 2619



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 20/185 (10%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQI 61
           + ++ D +  N   F F V A +  G  +S  V + V + D NDNAP          I  
Sbjct: 532 ASQDFDFEDANARSFEFAVTATDC-GNLSSTSV-VRVQILDSNDNAPVFTENDYFGYIDE 589

Query: 62  QAGEARRQIVK--IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +      ++   IE  D D+G+NA + Y++   +  G  +F+ID ++G+I +T      
Sbjct: 590 NSVSGTTVVINRYIETIDADIGLNAAVVYTL---TGEGSDQFQIDNKTGIITSTANDTDL 646

Query: 120 EQ-----YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
           ++     Y + V A D     G +SS   + + +V   N  SP+FQ   ++  V E   +
Sbjct: 647 DRENVSSYQLVVTAYDRDAQNGSRSSSAPITI-LVNDVNDNSPMFQNTFFNFTVMEDTDV 705

Query: 171 NSTVA 175
            + + 
Sbjct: 706 GNIIG 710



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 23/162 (14%)

Query: 21   FQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATD 77
            + ++     GT  ++VP+++TVN  D+NDNAP     +    +         V  + A D
Sbjct: 975  YHLVVTAHDGTHNSTVPINITVN--DVNDNAPLFEEAVYHFNVSEDATVGTTVGLVVAQD 1032

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KS 135
             D G+N+ +TY +   S+    KF +DP SG +             + + ATD G    +
Sbjct: 1033 MDTGINSRLTYFLVGGSD---GKFSVDPVSGAV------------FVLILATDRGKPTLT 1077

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S   +++ VV   N  +P F +  Y  ++ E ++  +TV  I
Sbjct: 1078 SSASIKIQVVD-VNDNAPSFTEPVYYGDIDENSATGTTVTMI 1118



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 13/175 (7%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARR 68
            D      +  +V+  +    A     S+ + + D+NDNAP     P    + + A +   
Sbjct: 2548 DYETKSHYILRVLVEDAGFHALRNVTSVHIEVIDVNDNAPYFIGEPYDAEVPVTA-DLNS 2606

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-EQYSITVQ 127
             +  + A D D G N  I Y++      G   F I   +G I     LI G   + +T+ 
Sbjct: 2607 TVFTVVAEDADSGENGRIIYTM-----KGSEYFIIGRDTGEIRVIKVLIGGVGTHELTIN 2661

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A+D G    S+ T+V ++V    N  +P    + Y   VSE     + VAT+T +
Sbjct: 2662 ASDNGKPPLSTTTMVTITVRE-VNIYAPECDPSNYTAEVSENVPDGTYVATVTAT 2715



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LD +      ++F V A +    + +    +T+ + DINDN P         I       
Sbjct: 2131 LDFEDTGGRVYKFDVFAVDNGEPSHTASTLVTITVTDINDNPPVFAGTYECTIDKLMVES 2190

Query: 69   QI-VKIEATDNDLGVNAEITYSI----YHVSNTGL 98
             I V ++ATD+D   NAE+ YS+    + V ++G+
Sbjct: 2191 DILVIVKATDDDSTTNAELVYSLDNDDFSVDDSGV 2225



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 19/163 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYH 92
            ++ + L D+NDNAP    + P ++ +           +V + ATD D+    +ITYS+  
Sbjct: 2788 TIDITLLDVNDNAPS---VYPSEMHSCIYHDSPIGTFVVDVNATDPDMI--GDITYSLSP 2842

Query: 93   VSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-GKSSQTIVEVSV-VPG 147
               +    F ID  SGVI T       +   +Y +TV   D     S    V + +    
Sbjct: 2843 TVESVRDMFEIDELSGVITTDTNFTVDMTDMEYLLTVLVKDGNPVHSDYGCVTIEIRYND 2902

Query: 148  PNTRSPVFQQNTYDVNVSE----GASINSTVATITVSRLASGC 186
             N  SP F Q+ Y   V E    GA ++  +  I +  +  G 
Sbjct: 2903 LNLHSPKFSQDEYSTVVPEYLPIGAVLDLDIMAIDIDDVDDGA 2945



 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 21/145 (14%)

Query: 41  VNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++L D+NDN+P       +     ++ +G     +  + ATD D G N ++ +S+     
Sbjct: 782 IHLLDVNDNSPMFDSDNYLVEVEEELTSG---TYLFTVTATDPDAGSNGDVLFSL----- 833

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTG--GKSSQTIVEVSVVPGPN 149
                F I+  +G I T  +L   E    +Y+    A D G  G +S   +++ +V   N
Sbjct: 834 -TTTDFVINQTTGEISTDVRLDFEEDDSRRYAFFALAVDQGEPGLTSTASIKIQLVD-IN 891

Query: 150 TRSPVFQQNTYDVNVSEGASINSTV 174
             +P+F +  Y  NV E A   +TV
Sbjct: 892 DNAPIFTEPVYYGNVDENAETGTTV 916


>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
          Length = 3262

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+     K   Q  A ++     S   ++ V + D+NDN+P +P + P+ I       
Sbjct: 2202 LDREITPSYKLVLQ--AADRGNPPLSSTATVRVQVVDVNDNSPAIPPMEPVLITENLPAG 2259

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
             +V  + T ND+ +++ ITYS    S+T +  F ID  +GVI  T  L   EQ  Y++TV
Sbjct: 2260 YMVT-QVTANDVDLSSTITYSFSDNSSTNI-PFAIDRYTGVITLTRALDYEEQTEYTLTV 2317

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             A+D+     QT  EV V V   N  +PVF Q++Y V +SE  S ++ V +++ +
Sbjct: 2318 WASDS---IHQTNGEVKVQVLDVNDNAPVFTQDSYQVELSELVSADTFVMSVSAT 2369



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 15/146 (10%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH--VSNTG-- 97
            D NDN P   M P +     E   A   +  + A DNDLG   ++TYS+      N G  
Sbjct: 2665 DENDNTPYF-MFPTVNCSVLENLPAFTHVCSVHAVDNDLGPYGQLTYSVMSSCFMNYGSG 2723

Query: 98   ----LHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
                   F IDP +G I T  T       +Y   V+A D G K++   V+V+ + G +  
Sbjct: 2724 NPERKEAFAIDPLTGDIHTRQTFDYERESEYCFIVEARDKGDKAATVRVQVN-IKGVDEF 2782

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SPVF Q  Y   + E      TV  +
Sbjct: 2783 SPVFTQKQYHFLLPENIKPGDTVGYV 2808



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R  V A ++   + S   +LTV + D+ND AP     +      +  +    ++++ ATD
Sbjct: 1587 RLTVRALDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIYTATVAENRDPGEPVIRVSATD 1646

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK- 134
             D   NA + YS+  +   G   F I+P +G+I TT  L   +Q  +++ VQA D+  + 
Sbjct: 1647 EDSEENAVVWYSL--LPGPGYELFSINPYTGLITTTSYLDREQQQHFTLRVQARDSSARP 1704

Query: 135  -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             SS T V  SV+   N   P F Q+++ +++ E
Sbjct: 1705 LSSTTTVMCSVL-DDNDNPPEFMQSSFRISLPE 1736



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 10/182 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ +   LDR+      F  +V AR+      S   ++  ++ D NDN P   M    +I
Sbjct: 1676 LITTTSYLDREQQQ--HFTLRVQARDSSARPLSSTTTVMCSVLDDNDNPPEF-MQSSFRI 1732

Query: 62   QAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               E  A   I   +A+D D G N  I YSI      G  +F I+  +G I TT  L   
Sbjct: 1733 SLPENLAPGVIHTAQASDPDHGENGTIHYSILGEDYRG--RFTINSHTGAISTTQVLDRE 1790

Query: 120  E--QYSITVQATDTGGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   Y++T+QA D G     +  ++  V+   N   P F + +Y  ++SEG +  + V  
Sbjct: 1791 ETQNYTLTIQARDYGPTPLSSFTQLHLVLLDQNDNIPSFTRKSYHASISEGLAAGAEVLR 1850

Query: 177  IT 178
            ++
Sbjct: 1851 VS 1852



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            V + D+NDNAP        Q++  E   A   ++ + ATD D  +N +I+Y +    ++ 
Sbjct: 2332 VQVLDVNDNAPVFTQ-DSYQVELSELVSADTFVMSVSATDRDSELNGKISYRLL---SSP 2387

Query: 98   LHKFRIDPRSGVIETTGKLIA---GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            L  F I P  G I T   L A        + V+A D G     T+  + V +   N   P
Sbjct: 2388 LQGFYIQPEDGSIFTNKPLKAITNSNLIHLLVEARDGGDPVQSTVTSIDVLILDTNDHEP 2447

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
             F Q+ Y + V E   I++T+ T++
Sbjct: 2448 SFYQDIYTLTVPEDTPIDTTLLTLS 2472



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 11/186 (5%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +     LDR+  +   +  +V A +      S      + ++D+ND  P       + 
Sbjct: 401 YALCVNSELDREEKD--LYELKVQASDFGNPPLSSETVFLLKVSDMNDCYPVFEKDAYL- 457

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           I   E   Q   +++ +A D D G N+E+ YSI   +   L    IDP SG++ T   L 
Sbjct: 458 ISISEDAPQGSSLIQFQARDADEGANSEVRYSILKSNQDSL--IDIDPESGLVTTAAALD 515

Query: 118 AGEQYSIT--VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              Q  I   V A D G  +  +   V+V V   N   PVF+Q  Y+V++ E + + S  
Sbjct: 516 RETQMEIWFLVVAVDGGEPALSSTATVTVLVEDVNDNEPVFEQQLYNVSILEQSDVGSCF 575

Query: 175 ATITVS 180
             +  +
Sbjct: 576 LQVAAT 581



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            V + D NDNAP          Q  E  +   ++V++ A D DLG N  + Y I  +S   
Sbjct: 2553 VTVTDCNDNAPVFSSTE-YHAQVSENSQLGTKLVQVSAHDPDLGTNGLVRYDI--ISGNS 2609

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ------TIVEVSVVPGPN 149
                ++DP+SG++     L      +Y +T++A+D GGKSS+      TIV ++V+   N
Sbjct: 2610 KGHLKLDPQSGLLVVNNSLDYEKDSKYILTIRASD-GGKSSENHKVAFTIVFITVL-DEN 2667

Query: 150  TRSPVFQQNTYDVNVSE 166
              +P F   T + +V E
Sbjct: 2668 DNTPYFMFPTVNCSVLE 2684



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPI 59
           LV +   LDR+     +  F V+A +    A S   ++TV + D+NDN P     +    
Sbjct: 507 LVTTAAALDRE--TQMEIWFLVVAVDGGEPALSSTATVTVLVEDVNDNEPVFEQQLYNVS 564

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK------FRIDPRSGVI--- 110
            ++  +     +++ ATD D   + E    +Y +S+ G  K      F+I+P +G +   
Sbjct: 565 ILEQSDVGSCFLQVAATDAD---SPEFGTLLYSLSD-GFDKQATHPLFQINPHTGELCVS 620

Query: 111 ----ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                 TG+ +    + I ++A D GG S+QT V +  +   N  +PVF    Y V++S 
Sbjct: 621 QDIDRDTGQTV----HDILIKAEDPGGLSAQTYVHIE-IEDLNDNAPVFSPEEYAVSISS 675

Query: 167 GASINSTVATITVSRLASG 185
            A   + +  +  +   SG
Sbjct: 676 HAQPGTEIVIVIATDRDSG 694



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG-EA 66
            LDR+      +   + AR+   T  S    L + L D NDN P          I  G  A
Sbjct: 1787 LDREETQ--NYTLTIQARDYGPTPLSSFTQLHLVLLDQNDNIPSFTRKSYHASISEGLAA 1844

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +++++ A D D G N E+TYS+   ++ G   F ID  +G I TT  L   +  QYS+
Sbjct: 1845 GAEVLRVSALDPDEGSNGEVTYSLTDDNSQG--AFLIDAFTGAIRTTRSLDRESRAQYSL 1902

Query: 125  TVQATD--TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               ATD  T G  S ++  V++ V   N   PV +Q  ++  VS     N  V T+T +
Sbjct: 1903 RAVATDGCTQGPLS-SLASVTIQVEDVNDNMPVCEQTPFNAWVSMRTLPNQIVTTVTAT 1960



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 9    LDRDPPNPGKFRFQVIA----REK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-Q 62
            LDR+  +   F F V A    +EK +   ASV   L   L D+NDN P        Q+ +
Sbjct: 1471 LDRE--STPSFAFTVTATDEAKEKNERKQASVTAQLF--LLDVNDNRPVFVSADTAQVME 1526

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQ 121
              E    +    A D D G N  +++SI   +  GL  F ++ ++G++  T  L    E+
Sbjct: 1527 DAEVGSLLHHFVAIDGDQGENGIVSFSIISGNKKGL--FTLEEKTGLLLLTAPLDYETER 1584

Query: 122  YS-ITVQATDTGG---KSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +  +TV+A D G     S+QT+ VEV  V   N ++PVF Q  Y   V+E
Sbjct: 1585 FHRLTVRALDQGLPSLSSTQTLTVEVGDV---NDQAPVFSQAIYTATVAE 1631



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           + +++ATD DLG N  +TY I    +     F I+  +GV+     L    Q  + + + 
Sbjct: 254 VCQVQATDYDLGDNGRLTYEINRRQSDPSEVFSINETTGVVYLNKPLDFETQAFHELIIN 313

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSP----VFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   + S T V V V+   N  SP    +F  +T D  VSE A++   VA I+VS
Sbjct: 314 ARDNGVQPEYSSTFVGVRVL-NINDNSPTISVLFLSDTGDAVVSESAAVGDYVARISVS 371



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 11/136 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
            +L +S  NLD +     K+ F+V+A E   +  +   ++TV + DINDNAP     +   
Sbjct: 1037 WLYLSA-NLDYE--TESKYHFRVLATEAALSNTTAMATVTVLVLDINDNAPVFSRDVYYF 1093

Query: 60   QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             +  G + + +V  ++A D D G N +++Y +  +S+     FRI+ ++G I     L  
Sbjct: 1094 TVLEGSSPQGLVGTVKAVDKDSGKNGQLSYLL--LSDGKF--FRINTKTGEIINWVALDR 1149

Query: 119  GE--QYSITVQATDTG 132
             +  Q+S+ V  TD G
Sbjct: 1150 EQYSQHSLKVMVTDQG 1165



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 10/191 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDI--NDNAPRLPMIPPIQ 60
            V   E+L+ D  +   +  +++A+++   + S  ++L+VN++     D+     +I  ++
Sbjct: 928  VTLNESLEMD--HQQGYNLEIVAKDEGEPSLSSTLTLSVNVDRTTAEDSLAFETLIYHVE 985

Query: 61   IQAG---EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            I  G   +AR   V+   T      N+ I YS+       L  FRI P++G +  +  L 
Sbjct: 986  IGEGYRKDARVIQVRAHRTRGGHISNSGIVYSLEGEPGFPLVPFRIHPKTGWLYLSANLD 1045

Query: 118  --AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                 +Y   V AT+    ++  +  V+V V   N  +PVF ++ Y   V EG+S    V
Sbjct: 1046 YETESKYHFRVLATEAALSNTTAMATVTVLVLDINDNAPVFSRDVYYFTVLEGSSPQGLV 1105

Query: 175  ATITVSRLASG 185
             T+      SG
Sbjct: 1106 GTVKAVDKDSG 1116



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +++ L DINDNAP+         +  G+     I+++ A+D D G+N +I YSI   +  
Sbjct: 2125 VSITLVDINDNAPQFEHSSYRTAVWEGQVHNTYIMQVFASDADSGMNGQIEYSILSGNLN 2184

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK--SSQTIVEVSVV 145
            G   F +D   G++  T  L+  E    Y + +QA D G    SS   V V VV
Sbjct: 2185 G--AFILDSVRGIL-ATNVLLDREITPSYKLVLQAADRGNPPLSSTATVRVQVV 2235



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 7/179 (3%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
           L VS++ +DRD    G+    ++ + +     S    + + + D+NDNAP   P    + 
Sbjct: 617 LCVSQD-IDRDT---GQTVHDILIKAEDPGGLSAQTYVHIEIEDLNDNAPVFSPEEYAVS 672

Query: 61  IQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I +  +   +IV + ATD D G   ++TY +     + L          ++ +T   +  
Sbjct: 673 ISSHAQPGTEIVIVIATDRDSGRFGQVTYDLLPGDMSTLFALDKQTGMLLLTSTLTHLGT 732

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP-VFQQNTYDVNVSEGASINSTVATI 177
               + + A D GG  S    EV++    + ++P VFQ++ Y   VSE A   + V T+
Sbjct: 733 ANVKLLITAQDGGGLISARPAEVTINVLRSAQAPAVFQRSRYTFTVSEDAPPGTPVGTV 791


>gi|432094189|gb|ELK25864.1| Cadherin-18 [Myotis davidii]
          Length = 790

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYIMEV 392

Query: 165 SEGASINSTVATI 177
            E A + + V  +
Sbjct: 393 YENAKVGTVVGAV 405


>gi|195436716|ref|XP_002066303.1| GK18218 [Drosophila willistoni]
 gi|194162388|gb|EDW77289.1| GK18218 [Drosophila willistoni]
          Length = 1791

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P         + G 
Sbjct: 207 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 266

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D      NA++ YSI        TG   F I+P +G+I+T    +  
Sbjct: 267 AGSPVMTMSAIDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGIIKTAVCCLDR 326

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE--GASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +   V E  G  I  T 
Sbjct: 327 ERTPDYSIQVVAMDGGGLKGTGTASIR-VRDLNDMPPQFTKDEWFTEVDETNGTFIPETP 385

Query: 174 VATITV 179
           + T+TV
Sbjct: 386 ILTVTV 391



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 20/158 (12%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
           ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I   +Y +
Sbjct: 121 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI---VYFL 177

Query: 94  SNTGLH-------KFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVE 141
           +  G+        KF I+  +G I     L   +     Q+  TV A D GG+      +
Sbjct: 178 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYAD 237

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + V +   N  +P F Q  Y  NV+E  +  S V T++
Sbjct: 238 IQVNLKDINDNAPQFPQGIYFGNVTENGTAGSPVMTMS 275


>gi|426246696|ref|XP_004017128.1| PREDICTED: cadherin-18-like isoform 2 [Ovis aries]
          Length = 574

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI      G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIIDGDGVGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|156383974|ref|XP_001633107.1| predicted protein [Nematostella vectensis]
 gi|156220172|gb|EDO41044.1| predicted protein [Nematostella vectensis]
          Length = 1096

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
           V +TVN+ DIND+ P     P   +   E  R    I+ + ATD D G N  +TYSI   
Sbjct: 438 VKVTVNVLDINDDRPSF-QSPSFNVSVNEIERLGTVILTVFATDGDAGANGTLTYSISAG 496

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
           +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 497 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 554

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             PV Q     V++SE A+I++ VAT+  S
Sbjct: 555 NPPVIQDAVIQVSLSETAAIDTPVATVIAS 584



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 17/190 (8%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           + LDR+  +  ++   V+A++      +   ++ + + D NDN P +     IQ+   E 
Sbjct: 515 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVI-QDAVIQVSLSET 571

Query: 67  ---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   + 
Sbjct: 572 AAIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISVAGVLSYKQW 627

Query: 122 --YSITVQATDTGGKS--SQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVAT 176
             Y++ V+ TD G  +  S+ IV + V      R+ PVF    Y   V +  S +  V T
Sbjct: 628 HNYTVVVKVTDGGSLALESRAIVLIDVTSTTENRNGPVFASVQYIGGVYKDTSFDFPVLT 687

Query: 177 ITVSRLASGC 186
           +T +   +G 
Sbjct: 688 VTATDSDTGV 697



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 2   LVVSKENLDRDP--PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
           L+V+K  LDR+      G FRF+V A +      S+   LT+   DINDNAP     P  
Sbjct: 105 LIVNK-TLDREAMGSGDGSFRFEVYASDGSSPQGSLRAFLTII--DINDNAPAFQNTPLT 161

Query: 60  QIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
           +  + +      +V + ATD D   NA IT+ I  VS      F ID  +G I
Sbjct: 162 KSCSEDTPVGFPVVTVTATDADATTNAIITFVI--VSGNEGEAFSIDKVTGDI 212



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 13/99 (13%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
           I ++ A D D  +NA + YSIY  S+  GL  F I+  SG +   G L  G  YS+ V A
Sbjct: 281 ITQVHAEDMD-SLNAPVEYSIYPDSDPDGL--FAINKTSGAVTVDGNLKNG-VYSLIVNA 336

Query: 129 TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             T    + T+V+V+V P PN         TY V V EG
Sbjct: 337 KSTTQPPAFTLVKVTVGPLPNL--------TYAVTVLEG 367



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITV 126
           ++ + ATD+D GVN  + Y I    +T L  F ++P SG I T         G+ +S +V
Sbjct: 685 VLTVTATDSDTGVNGVVEYRIRE--DTDL--FYVEPTSGTIRTADVFADKDEGQSFSFSV 740

Query: 127 QATDTGGKSSQT 138
           QA+D G    +T
Sbjct: 741 QASDKGTPPKET 752


>gi|145587090|ref|NP_001074768.1| cadherin 18 precursor [Mus musculus]
          Length = 790

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETT 113
           P   Q G A   + KI+A D D G NA++TYSI   +  G+  F I    D R G++   
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSI--TNGDGIGVFSISTDKDTREGILSLK 332

Query: 114 GKL-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
             L           I G    +  + +  G     T+++V V  G     P+F   +Y +
Sbjct: 333 KPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKVIV--GDVDEPPLFSMPSYVM 390

Query: 163 NVSEGASINSTVATI 177
            V E A I + V T+
Sbjct: 391 EVYENAKIGTIVGTV 405


>gi|291239827|ref|XP_002739825.1| PREDICTED: Cadherin-23-like [Saccoglossus kowalevskii]
          Length = 3451

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 26/182 (14%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQA 63
            LDR+  N   +RF V A +  G  +S  +   VN+ D+NDN+P      + +  P  +  
Sbjct: 1797 LDREAEN--IYRFLVTAIDIGGLNSSAEI--VVNIVDVNDNSPVFTPSNMTVFIPENVVG 1852

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGE-- 120
            G    +++ I+A   D+G+N E+T   Y V + G  KF I+P +G+I+   G+ +  E  
Sbjct: 1853 GHVVMEVLAIDA---DIGLNQEVT---YRVESGGQDKFTINPNTGLIKVAPGETLDREQR 1906

Query: 121  -QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP----VFQQNTYDVNVSEGASINSTVA 175
             QY++ V ATD G  S      VS++ G    +P    V  QN Y   + E + + +T A
Sbjct: 1907 DQYTLVVIATDRGNPSQSGTGTVSIIVGDINDTPPSFTVLSQNFY---LRENSPVGTTAA 1963

Query: 176  TI 177
             +
Sbjct: 1964 WV 1965



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 7/112 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ + A+D D+G NA+I Y I H +  G  KF+I  +SG+++T+  L     E+Y++T++
Sbjct: 998  LIVLSASDGDIGTNADINYFITHGNQDG--KFQIHFQSGLVQTSAFLDREVVEEYNLTIE 1055

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G   K+    V V+V+   + R P+F ++ YDV V E  + + T+ T+
Sbjct: 1056 AIDNGVYAKTGTCYVTVNVLDINDNR-PIFTESNYDVTVMENVTQDYTIVTV 1106



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 8/146 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS-NTG 97
            V + DINDN P     P I   ++   A   ++++ A+D D G N  ++Y I  +  NT 
Sbjct: 861  VTVLDINDNVPVFEDTPYIGSVVENQPAGTSVIQVSASDLDFGENGTVSYFIVSLEPNT- 919

Query: 98   LHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
             + F ++  +G+I  T  L     + Y+IT+QA D G   +  I  V + +   N  SP+
Sbjct: 920  -NNFDMNSSTGLITLTHPLDREYIQAYNITIQARDGGMDPNVAIATVQIEIEDDNDHSPL 978

Query: 155  FQQNTYDVNVSEGASINSTVATITVS 180
            F  N+Y+V+V E A+  +++  ++ S
Sbjct: 979  FTANSYEVSVLENATRGTSLIVLSAS 1004



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 15/163 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVK-IEAT 76
           +   ++A ++     S   SL + + D+ DN P    +P    +        +V+ + A 
Sbjct: 197 YELTIVATDQGIPQQSSEASLIIKVTDVQDNPPMFTGLPYTTSVDENSPTTLVVQTVRAF 256

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE------QYSITVQATD 130
           D D+G++ +I+YSI  VS +    F I+  +G I    +LI  E        ++TV+A +
Sbjct: 257 DQDIGLSNQISYSI--VSASVPELFTINADTGEIRGQ-RLIDREAEGFPGYVTLTVEALE 313

Query: 131 TG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G   G S+QT   +++    N  SP+F Q  Y + VSE A I
Sbjct: 314 VGPDGGDSAQTEFTITI-NDVNDESPLFSQAEYSITVSENAHI 355



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 10/121 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           +  + ATD+D+G+  +ITY+I     +G  +F ID   GVI     +      +Y +TV+
Sbjct: 468 VTMVTATDDDIGIYGDITYTI-----SGADQFIIDAELGVISLIQSIDYELSLRYQLTVR 522

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   ++  T V ++V+   N   PVF+     V ++E   I++ +  +T S L  G
Sbjct: 523 AEDGGNPAEADNTRVIINVI-DVNDNPPVFKDIRQTVYIAEDQPIDTVIGNVTASDLDFG 581

Query: 186 C 186
            
Sbjct: 582 M 582



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 10/129 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSN 95
            +TVN+ DINDN P         +   E   Q   IV + A D D+G NA+ITY+I  ++ 
Sbjct: 1070 VTVNVLDINDNRPIFTE-SNYDVTVMENVTQDYTIVTVHALDADIGENAKITYAI--IAG 1126

Query: 96   TGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTGGKSSQTIVEVS-VVPGPNTR 151
               + F ID   G I    + +     E Y +TV+A++      ++ V VS +V   N  
Sbjct: 1127 NTQNSFVIDSNYGDIRRNEQPLDRETEESYILTVEASNNDSNMFRSQVRVSMMVYDVNDE 1186

Query: 152  SPVFQQNTY 160
             PVF Q+ Y
Sbjct: 1187 KPVFTQSVY 1195



 Score = 42.7 bits (99), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 18/193 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI 59
           ++ +  LDR+  N   +   VIA ++     S    +T+ + D+NDN P     P +  I
Sbjct: 719 IILERQLDRE--NIDMYGLTVIASDRGIPRHSAVCYVTIIVRDVNDNDPIWIDEPYMTTI 776

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +  +    + ++ A D D+G N  + Y I    N     F++D  SGVI TT   +  
Sbjct: 777 S-EDVDNGTYVFQVSAIDADIGSNQLLVYEI----NPFTPYFKVDSASGVITTTDVPLDR 831

Query: 120 EQYS---ITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
           E  +   I +   D+G      S   IV V+V+   N   PVF+   Y  +V E     +
Sbjct: 832 EMNTAQEIILTVKDSGRPLRRSSHSAIVHVTVL-DINDNVPVFEDTPYIGSVVENQPAGT 890

Query: 173 TVATITVSRLASG 185
           +V  ++ S L  G
Sbjct: 891 SVIQVSASDLDFG 903



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 18/180 (10%)

Query: 19  FRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMI-PPIQIQAGEARRQIV-KIE 74
            R+Q+  R + G   A +    + +N+ D+NDN P    I   + I   +    ++  + 
Sbjct: 515 LRYQLTVRAEDGGNPAEADNTRVIINVIDVNDNPPVFKDIRQTVYIAEDQPIDTVIGNVT 574

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI---TVQATDT 131
           A+D D G+N +I YS   +S      F I    G I    +L   + Y +    + A D 
Sbjct: 575 ASDLDFGMNGDIIYSF--ISGNTDDVFSIGLFDGEILIKKELDYDDLYQVYILEILAHDQ 632

Query: 132 G-------GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           G       G ++ T V VSV+   N  SPVF+   Y   VSE A    T+  I  + + S
Sbjct: 633 GVPVDPATGSATAT-VTVSVI-DVNDNSPVFEYTVYQFAVSEEADPGITIGMIRATDMDS 690



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 21/193 (10%)

Query: 9    LDRDPPNPGKFRFQV----IAREKQGTAASVP-VSLTVNLNDINDNAPRL--PMIPPIQI 61
            LDR+  N   F+  +    ++ +  G+  S P   ++++L D+NDN P    P +  I  
Sbjct: 2018 LDRE--NVSVFQLTISAVDLSSQYNGSRHSNPNAEVSIHLLDVNDNDPVFQPPGLEYIHE 2075

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            Q  E       +    A D D G+   + Y I   + T L +   DP  GVI   G ++ 
Sbjct: 2076 QLVEQSPLDTVVTTFTALDRDKGLQGMVRYEIVD-NKTDLLQIS-DPAVGVITVNG-VVD 2132

Query: 119  GEQY---SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             E Y   + TV+A D G   + SQ  V V ++   N  +P+F+Q+ Y+ +V E A   + 
Sbjct: 2133 REIYQWLNFTVKAWDFGNPPRYSQIPVFVEILE-LNDNNPIFRQSLYETSVVENAIAGTE 2191

Query: 174  VATITVSRLASGC 186
            +  +  +   SG 
Sbjct: 2192 ILVVIATDADSGS 2204



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 14/122 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITY---SIYH 92
            ++ + + DINDN P+ P        + +A+ +  ++ + A D D G N+ + Y   SIYH
Sbjct: 2831 TVVIKVVDINDNGPQFPRDEYTAGLSLDAKYESKLITVTAKDEDTGNNSIVYYSILSIYH 2890

Query: 93   VSNTGL-------HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVS 143
            +  T         + F+I    G+I T    ++     + + V A D G K+   IV++ 
Sbjct: 2891 LDTTTDLPPRVQPNAFKIGRLDGIIRTNELFVSFYHGYFELNVLAEDNGHKNDTAIVKIY 2950

Query: 144  VV 145
            ++
Sbjct: 2951 ML 2952



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 14/176 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG 64
            LDR+     +    V+  + QG      +VPV +TV   D+NDN+P     +  + +   
Sbjct: 2303 LDRESLGNKEMVSMVVKIQDQGVEHHEVTVPVLITVL--DVNDNSPYFAYAMYNVTLSED 2360

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGE--Q 121
            +    +V  + +  DL  +  ITY++    +  L+ +F +  ++G + T   L      +
Sbjct: 2361 DFGGTLVY-QFSAVDLDQDPVITYTLL---DADLYSEFTVSEQTGALTTVSSLDHESRPE 2416

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y +T++A+D  G    T + + V+   N ++P+F    Y  +V E  S+ S V  +
Sbjct: 2417 YLLTIEASDEDGNVGTTQLYIRVL-DTNDQAPLFAITLYQFSVKENESVGSLVGQV 2471



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 18/134 (13%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+  +   +R  V A +      +  + +T+N+ D+NDN P         +  G    
Sbjct: 1463 LDREVKD--TYRLIVSAYDSGDVPLNTSMIVTINIEDVNDNIP--------NVGGGTI-- 1510

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSIT 125
             I  + ATD D+G N  + Y I   +  G   FR+D  +G I T       E+   Y++T
Sbjct: 1511 -ITTVYATDEDIGSNGVLKYYIVDGNTDG--TFRMDRNTGEISTRPDPPDREKQDFYNLT 1567

Query: 126  VQATDTGGKSSQTI 139
            V A D G    Q +
Sbjct: 1568 VLAEDEGDDVIQQV 1581


>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
          Length = 4589

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V + E LDR+         +++A++  G  A    ++ V L D NDNAP+       + I
Sbjct: 2549 VFTLEKLDRETLAEKVISVRLMAKDTGGKVAFC--TINVILTDDNDNAPQFRATKYEVNI 2606

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
             +  A+   ++K+ A+D D G NA++TY+I   S++      I+  SG+I T   LI   
Sbjct: 2607 GSSAAKGTSVMKVFASDTDEGSNADVTYAIEADSDSVKENLEINKLSGIITTKESLIGLE 2666

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E ++  V+A D G    +++V V V +  P  + P F +  Y   VSE   I + +  I
Sbjct: 2667 NEFFTFFVRAIDNGSPPKESVVPVYVKILPPERQLPKFSEPFYTYTVSEDTPIGTEIDLI 2726



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+AP            ++  A   ++++ A D D G NAE+ YSI    N 
Sbjct: 1549 IIVNVSDTNDHAPWFTSSSYEGRVYESAAAGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1607

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G + F IDP  G I+T  +L     E+Y + V+ATD G    S  T V + V    N  S
Sbjct: 1608 G-NSFTIDPILGSIKTAKELDRSNQEEYDLMVKATDKGNPPMSEMTSVHIFVTVADNA-S 1665

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F    Y + +SE  SI S V  +T
Sbjct: 1666 PKFTSKEYSIEISETISIGSFVGIVT 1691



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+     K  + +      GT +S  + + V + D NDN+P         
Sbjct: 2977 WKVYVKKPLDREK----KDSYLLTITATDGTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3031

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP   +      + IV++ ATD D+  NAEITY+++    +G  KF+++P +G ++T  
Sbjct: 3032 TIPEDALPG----KLIVQVSATDADIRSNAEITYTLF---GSGAEKFKVNPDTGELKTLA 3084

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + Y V V E
Sbjct: 3085 PLDREEQAVYNLLVRATDGGGRFCQANI-VLPLEDVNDNAPQFTADPYTVTVFE 3137



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1234 VKILDENDNKPQFLQKFYKIRLPEREKPERERNAKREPLYRLIATDKDEGPNAEISYSIE 1293

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1294 DGNEHG--KFFIEPKTGVVSSKKFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1351

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  I+V
Sbjct: 1352 PSPEPISFEESFFTFTVMESDPVAHMIGVISV 1383



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 10/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P  ++    
Sbjct: 1098 LDRE--SMSHYWLTVYAADRAVVPLSSFIEIYIEIEDVNDNAPQTSEPVYYPEIMENSPK 1155

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +V+IEA D D   N ++ Y I   +  G   F I P++G+I TT + +  EQ   + 
Sbjct: 1156 DISVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRRLDREQQDEHI 1213

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1214 LEVTVTDNGTPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1257



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI + +  G  KF ID ++G I     L   +  +Y +TV
Sbjct: 3249 EVLQVYAASRDIEANAEITYSIINGNEHG--KFSIDSKTGAIFIIENLDYESAHEYYLTV 3306

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +   ++ V   N  +P F Q+TY   +SE A +  +V T+
Sbjct: 3307 EATDGGTPSLSDVATANINVTDINDNTPSFSQDTYMAVISEDAVLEQSVITV 3358



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDN 78
            + ++ R   G       ++ + L D+NDNAP+    P      +  E    + +++ATD 
Sbjct: 3094 YNLLVRATDGGGRFCQANIVLPLEDVNDNAPQFTADPYTVTVFENTEPGTLLTRVQATDA 3153

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+   +N    +F I+  SG+I+    L    Q  Y++ ++A D G   K
Sbjct: 3154 DTGLNRKISYSLIDSANG---QFSINEISGIIQLEKPLDRELQAVYTLVLKAVDQGLPRK 3210

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             S T   V  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3211 LSATGTVVVSVLDINDNPPVFEYREYGATVSEDILIGTEVLQV 3253



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN P+   IPP  +++  E   +   IV +EA D DLG ++++ YS+  
Sbjct: 912  VLLKVSLEDVNDNPPKF--IPPNYRVKVREDLPEGTIIVWLEAHDPDLGQSSQVRYSLL- 968

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L    +  Y++TV+A D G     SS   VEV V+  
Sbjct: 969  --DHGEGIFDVDKLSGAVRIIQQLDFERKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDV 1026

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF        V E   I S++ T++     +G
Sbjct: 1027 NENLHPPVFSSFVEKGVVKEDVPIGSSIMTVSAHDEDTG 1065



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   +  +N+ DINDN P       + + + +A
Sbjct: 3292 ENLDYESAH--EYYLTVEATDGGTPSLSDVATANINVTDINDNTPSFSQDTYMAVISEDA 3349

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 3350 VLEQSVITVLADDADGPSNSLIHYSIIE-GNQG-SPFTIDPVKGEVKVT-KLLDRETISG 3406

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++T+QA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 3407 YTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQENKPVGFSVLQLVVT 3466



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q         A      +VK+ ATD+D  
Sbjct: 2262 TGAHAEVFVDIIVEDINDN-------PPVFVQQSYSATLSEASVIGTSVVKVRATDSDSE 2314

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D G    SS 
Sbjct: 2315 PNRGISYQMFGNHSKSQDHFHIDGSTGLISLLRTLDYEQFQQHKIFVRAIDGGMPPLSSD 2374

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             IV V V    N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2375 VIVTVDVT-DLNDNPPLFDQQIYEAKISEHATHGHFVMCV 2413



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   ++    ASV VS+ V   D NDN P     P     ++      +++++
Sbjct: 2775 YQFSILARCTHDEYEVVASVDVSIQVK--DANDNTPVFESNPYEAFIVENLPGGSRVIQV 2832

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G+N  + YS+    +   +  F I+  +G I T  +L   E+  Y I V A+D
Sbjct: 2833 RASDLDSGMNGHVMYSLDQSQSVDIIESFAINMETGWITTLKELDHEERDIYQIKVVASD 2892

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV V+V    N   P F    Y   VSE
Sbjct: 2893 HGEKVQLSSTAIVAVTVA-DVNDSPPRFTAEIYKGTVSE 2930



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSIT 125
            +++++ATD D G+   ITYSI  V++    +F  +   G + T  KL    +A +  S+ 
Sbjct: 2512 VIEVKATDKDSGIYGHITYSI--VNDFARDRFYTN-EIGQVFTLEKLDRETLAEKVISVR 2568

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A DTGGK +   + V ++   N  +P F+   Y+VN+   A+  ++V  +  S    G
Sbjct: 2569 LMAKDTGGKVAFCTINV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVMKVFASDTDEG 2627



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I         V  ++A D D      + YSI  +S
Sbjct: 2375 VIVTVDVTDLNDNPPLFDQQIYEAKISEHATHGHFVMCVKAYDADSSDIDRLEYSI--LS 2432

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F I+  +G+I  +       +  YS+ +  +D   +SS   V V+V+ G N  S
Sbjct: 2433 GNDHKNFVINSETGIITLSNLRRHNLKPFYSLNISVSDGVFRSSAQ-VHVTVIGG-NLHS 2490

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+V ++E A I++ V  +  +   SG
Sbjct: 2491 PVFPQNEYEVELAENAPIHTLVIEVKATDKDSG 2523



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 809 LDIIILDANDNPPEF-LQESYFVEVNEDKEINSEIIQVEATDKDLGSNGHVTYSIL---- 863

Query: 96  TGLHKFRIDPRSGVIETTGKL 116
           T   KF ID  +GV++    L
Sbjct: 864 TDTDKFLIDSTTGVVKIVHPL 884



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 22/123 (17%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKI 73
           ++   ++ T A     + V + DIND  P          LP   PI       R  I ++
Sbjct: 120 IVKAVEKNTNAEARTRVRVQVLDINDLRPLFSPTSYSVSLPENTPI-------RTSIARV 172

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDT 131
            ATD D+G N E  YS    ++     F I P SG +  TG+L  +  + Y + + A D 
Sbjct: 173 SATDADIGTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYMETQLYELEILAVDR 228

Query: 132 GGK 134
           G K
Sbjct: 229 GMK 231



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E R     I+ + +TD D G N ++ YSI   +      
Sbjct: 708 HSVNTHAPQFRNTLPTGIEVKENRPVGSNIIFMNSTDLDSGFNGKLIYSISGGNEDSC-- 765

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +   D G   K++  ++++ ++   N   P F 
Sbjct: 766 FIIDMDTGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDI-IILDANDNPPEFL 824

Query: 157 QNTYDVNVSEGASINSTV 174
           Q +Y V V+E   INS +
Sbjct: 825 QESYFVEVNEDKEINSEI 842



 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++T+Q T+  G S+ T V V +    N   PVF Q
Sbjct: 1711 FDINPHSGSI-ITQKALDFETLPIYTLTIQGTNMAGLSTNTTVLVHL-QDENDNIPVFIQ 1768

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1769 AEYSGLISESASINSVVLT 1787



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 23/174 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIV 71
            K  + +      GT A +   + + + D ND+ P+        +IP   +   E    I+
Sbjct: 1423 KSNYNLTVEATDGTTA-IHSQVLIKVIDTNDHRPQFSTSKYEVVIPEDTVPETE----IL 1477

Query: 72   KIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I A D D     E    IY + ++     L KFR+DP SG + T+ KL   A  Q+ +T
Sbjct: 1478 QISAMDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPASGSLSTSEKLDHEAVHQHVLT 1532

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V   D      +    + V V   N  +P F  ++Y+  V E A+  S V  +T
Sbjct: 1533 VMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAAGSVVLQVT 1586



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQ------IVKIEATDNDL 80
            PVSL+      V + D+N+N     + PP+    ++ G  +        I+ + A D D 
Sbjct: 1010 PVSLSSTCYVEVEVIDVNEN-----LHPPVFSSFVEKGVVKEDVPIGSSIMTVSAHDEDT 1064

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G + EI YSI   S  G+  F+ID  +GV+ET+  L   +   Y +TV A D       +
Sbjct: 1065 GRDGEIQYSIRDGSGVGV--FKIDEETGVLETSDLLDRESMSHYWLTVYAADRAVVPLSS 1122

Query: 139  IVEVSVV------PGPNTRSPVF 155
             +E+ +         P T  PV+
Sbjct: 1123 FIEIYIEIEDVNDNAPQTSEPVY 1145



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +   + +    
Sbjct: 1835 SLDYEETSVFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLYEALLLLPTY 1894

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +I+ + ATD D    +++ YSI    N G  KF +D ++G I          +Y +T
Sbjct: 1895 RGVKIITVNATDADSSAFSQLIYSITE-GNIG-EKFFMDYKTGTITIQNTTQLRSRYELT 1952

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1953 IRASD-GRFASFTSVKINVKESKESQLK-FTQDFYSAVVKENSTEAKTLAVIT 2003



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 17/141 (12%)

Query: 45   DINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            D NDNAP    LP    +++   E    I  + A D D G N E+ Y +    +     F
Sbjct: 2074 DQNDNAPVFINLPYYAVVKVDT-EVGHVIRYVTAVDRDSGRNGEVHYYLKEHHD----HF 2128

Query: 102  RIDPRSGVIETTGKL---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +I P SG I    +       ++Y +TV A D G    S++ IV ++V+   N   PVF+
Sbjct: 2129 QIGP-SGEISLKKQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPVFE 2184

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +  Y   + E   ++S V  +
Sbjct: 2185 KPFYSAEIPENIQMHSPVVHV 2205


>gi|344252729|gb|EGW08833.1| Protocadherin Fat 2 [Cricetulus griseus]
          Length = 3133

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 20/152 (13%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + SK+ LDR+  +  K+  +V A + +    SVPV + V   DINDN+P+   +    
Sbjct: 2168 WRISSKKTLDRE--HIAKYLLRVTASDGK-FQTSVPVEVFVL--DINDNSPQCSQL---- 2218

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G           I+K+ A D D+  NA+ITYS++     G  +F++DP +G + T  
Sbjct: 2219 LYTGRVHEDVTPGHFILKVSAVDADMDTNAQITYSLH---GPGAQEFKLDPHTGELTTLT 2275

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
             L    +  Y++  +ATD GG+S Q  V + +
Sbjct: 2276 ALDRERKDIYNLVAKATDGGGQSCQADVTLHI 2307



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 23/155 (14%)

Query: 39  LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           + V + D+NDN P         RLP  + P+   AG     +  + A+D D G+N  ITY
Sbjct: 458 VVVCILDVNDNPPMFSHKLFNVRLPERLSPLS--AGP----VYSLVASDPDEGLNGSITY 511

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV--VP 146
           SI      G   FRIDP +G++ ++    AGE   +T++ATD+G  +  T V + +  +P
Sbjct: 512 SIEESDEEG---FRIDPVTGLVSSSSTFAAGEYNILTIKATDSGQPALSTSVRLHIEWIP 568

Query: 147 GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            P   S P+ F +  Y   V E   +N  V  ++V
Sbjct: 569 QPRPSSIPLSFDEPHYSFTVMETDPVNHMVGVVSV 603



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P    IQ G E    + ++ ATD DLG N  +TY          
Sbjct: 1288 VSVEDVNDNVPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGTVTYGF----AEDY 1343

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G    QT VEV V    N  +P+FQ
Sbjct: 1344 AYFRIDPYVGDISLKKPFDYQALNKYHLKVIARDAGTPPLQTEVEVHVTVR-NKSNPLFQ 1402

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 1403 SPYYKVKVPENIALYTPI 1420



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 7/169 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+AR+  G  A   V +   L D NDNAP+       + I
Sbjct: 1739 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 1796

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +  +R   ++++ A D D G NA++TYS+  + +       ++P +GV++    L+  E
Sbjct: 1797 PSNVSRDSPVIQVLAYDADEGRNADVTYSVDSIEDLAEEIIEVNPTTGVVKVKESLVGLE 1856

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSVVPGPN-TRSPVFQQNTYDVNVSE 166
              ++   ++A D G     ++V V +   PN    P F +  Y  + SE
Sbjct: 1857 NRAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEVPLPKFSEPLYTFSASE 1905



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+N++ PR    +     ++       I+ + A D D  +N  ITYS+  V  
Sbjct: 2490 TIVVNVTDVNEHHPRFTHDLYTVRVLENAVVGDTILTVSAFDEDGPINNAITYSL--VGG 2547

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              L  F I+P+ G ++   K +  EQ   YS+ ++ATD+G        EV+V V   N  
Sbjct: 2548 NQLGHFTINPKKGKLQ-VAKALDWEQTPSYSLKLRATDSGQPPMHKDTEVAVEVVDVNDN 2606

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITV 179
             P F Q  Y   V E + I + V  + +
Sbjct: 2607 PPRFFQLNYSTAVQENSPIGNKVLQLIL 2634



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P      +       ++++ A D D G + +++Y +    
Sbjct: 1985 VSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 2044

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F +D  SG I T  +L    Q  Y   V A D G     SSQ +VEVS+    
Sbjct: 2045 GSNIHELFAVDNESGWITTLKELDCETQQIYHFYVVAFDHGQTIQLSSQALVEVSIT-DE 2103

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N   P F    Y  +V E +     VAT+
Sbjct: 2104 NDNPPRFASEDYRGSVVENSEPGELVATL 2132



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 1487 TVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGKNQDVSYQIVEDGS 1546

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 FRI+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 1547 DVSKFFRINGSTGEMFTIQELDYEAQQHFQVKVRAMDRGDPPLTGETLVVVN-VSDINDN 1605

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F++  Y+ NVSE A+    V  +
Sbjct: 1606 PPEFREPQYEANVSELATCGHLVLKV 1631



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 16  PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
           P +    V+ R+++       V +T+++ D N + P    +      P     G    ++
Sbjct: 748 PSQHILVVMVRDQEMPIKRNFVWVTIHVEDGNLHPPHFTQLHYEANVPDTTAPG---TEL 804

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
           +++ A D D G NAE+ YS    ++     F ID   G I    KL  +   ++ +TV+A
Sbjct: 805 LQVRAMDADRGANAEVHYSFLKGNSEDF--FNIDTLFGTITVAQKLDHVHHTKHMLTVKA 862

Query: 129 TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G      +  V +   P ++ +P+F ++ Y + + E   + S +  I+ +
Sbjct: 863 EDQGSPRRHDLAMVVIRVHPSDSSAPIFSKDEYFIEIPESVPVGSPILLISAT 915



 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 28/193 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
           LVV+  +LDR+  +  ++  +V AR++  +G        L V L D NDNAP       R
Sbjct: 105 LVVTG-HLDRE--SEPQYILKVEARDQPMKGHQLFSVTDLIVTLEDTNDNAPQCITEHSR 161

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIE 111
           L +  P  +  G     +  ++A+D DLG   E+ Y +       +H  FR++P +G + 
Sbjct: 162 LKV--PEDLPLGTV---LTFLDASDPDLGPAGEVRYILV----DDVHGTFRVEPMTGALS 212

Query: 112 TTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVS 165
              +L    +  Y++++ A+D+G    + +   VEV V+    N  SP F    Y   V 
Sbjct: 213 LERELDFERRAGYNLSLWASDSGRPLARRTLCHVEVLVLDVNENLHSPHFSSFVYQGQVQ 272

Query: 166 EGASINSTVATIT 178
           E +   + V  +T
Sbjct: 273 ENSPAGTQVMVVT 285



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 11/172 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLN-DINDNAPRLPMIPPIQIQAGEARRQIVKIEAT 76
            K+  +VIAR+    A + P+   V ++  + + +  L   P  +++  E       I  T
Sbjct: 1368 KYHLKVIARD----AGTPPLQTEVEVHVTVRNKSNPLFQSPYYKVKVPENIALYTPILHT 1423

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-G 133
                     + Y+I  V    L  F  D ++GV+  TG L   +  ++  TV+ATDT  G
Sbjct: 1424 QARSPEGLRLIYNI--VEEEPLMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALG 1481

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S+  VEV +V   N   P F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 1482 SFSEATVEV-LVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 1532



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 16/165 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLP--MIPPIQI 61
            E LD +  N   F+F V   + QGT    A  P  + +++ D+ND +PR    +     +
Sbjct: 1056 EELDYE--NTPLFQFNVYVHD-QGTPLLFAPRPAKVIIHVRDVNDFSPRFSEQIYEVAVV 1112

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                   +++ ++A D+D    +E+ YSI    NT    F I P +G I      + G  
Sbjct: 1113 GPTHPGMKLLTVQAKDDD----SEVIYSI-KTGNTD-EAFAIHPITGHISVVNPAVLGFS 1166

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              +T++A+D G      +V++S+    + +S  F Q+ Y   V E
Sbjct: 1167 RKLTIKASD-GLYQDTALVKISLTKVLD-KSLQFDQDIYRARVKE 1209



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +   V+A ++     S    + + + DINDN P +  P+  P   +       ++++EA 
Sbjct: 333 YWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPCMSRPVFYPCVQEDVPLGTSVLQLEAW 392

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
           D D     ++T+++   S   +  F I P +GV+ T  +L     +++ + V   D G  
Sbjct: 393 DPDSSSQGKLTFNL--TSGNHMGYFVIHPFTGVLTTARQLDRENKDEHVLEVTVLDNGEP 450

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             ++   V V +   N   P+F    ++V + E  S
Sbjct: 451 PLKSTSRVVVCILDVNDNPPMFSHKLFNVRLPERLS 486



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTV + D NDN PR    PP   Q       E    I +++  D D   N  + YS+   
Sbjct: 36  LTVTVKDWNDNPPRF---PPGGYQLTISEDTEVGTTIAELKTKDADSEDNRRVRYSLL-- 90

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
             T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 91  --TPTEKFSLHPLTGELVVTGHLDRESEPQYILKVEARDQPMKGHQ 134



 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQYS---I 124
           ++++++A D D G    + Y+I+   + G    F++DP SGV+ T G+L    Q S   +
Sbjct: 696 ELLRVQAADQDNGKG--LIYTIHSSQDPGSASLFQLDPSSGVLVTVGRLDLHSQPSQHIL 753

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            V   D      +  V V++ V   N   P F Q  Y+ NV +
Sbjct: 754 VVMVRDQEMPIKRNFVWVTIHVEDGNLHPPHFTQLHYEANVPD 796



 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
           A  Q++ + A D D G++ E+ Y +   + TGL  F I+  +G++ET   L       Y 
Sbjct: 277 AGTQVMVVTAQDEDGGLDGELQYFLR--AGTGLEAFSINQDTGMLETLVPLDREFTPYYW 334

Query: 124 ITVQATDTGGKSSQTIVEVSV 144
           +TV A D G      + EV +
Sbjct: 335 LTVLAVDRGSVPLSAVTEVYI 355


>gi|328710951|ref|XP_003244410.1| PREDICTED: protocadherin-like wing polarity protein stan-like isoform
            2 [Acyrthosiphon pisum]
          Length = 3165

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V+ + LDR+  +   +   V AR+      S    + +++ DINDNAP+          
Sbjct: 884  IVTTKALDREVQS--GYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASYYGSV 941

Query: 63   AGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            + +A     ++++ A+D D G+N  I Y++    + G+  F IDP SG++ T   L    
Sbjct: 942  SEDALTGTSVLQVSASDADSGLNGRIKYAL----DDGVEAFVIDPTSGILRTAASLDRES 997

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              QY+I V A D G  S  T V V++ +   N   PVF+ +   + + E + I STV  +
Sbjct: 998  IPQYNIHVFAIDKGSPSLSTAVPVTIRIEDVNDSPPVFESDKLVMYIPENSPIGSTVGEL 1057



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 17/180 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIP 57
           LV +  +LDR+  +    R  VIA +     ++   +L VN+ D ND++P       M  
Sbjct: 339 LVTTLVSLDREFMDVHYLR--VIAIDTSSHPSTATTTLQVNVVDANDHSPVFESASGMYE 396

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIET 112
               ++      I+ I ATD D+GVN++I YSI  +S  G++      F ID RSGV+  
Sbjct: 397 ASVRESVSVGTTIITIRATDLDIGVNSQIEYSIESISGGGINSSADETFGIDLRSGVVSV 456

Query: 113 TGKLI--AGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              L     E Y++ V+A+D       + S     V  V   N   P F +  Y  NV+E
Sbjct: 457 RRNLDREVCEVYTVMVKASDQAAPPSPRRSAIASLVVKVLDDNDNYPQFSERAYTANVAE 516



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 15/172 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D+NDN PR    +     ++       IV+++A 
Sbjct: 578 YRLMIRAQDGGNPSRSNTTQLLVNVKDVNDNPPRFYTSLFQESVLENVAVGYSIVRVQAY 637

Query: 77  DNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLIAGE---QYSITVQAT 129
           D D G NA + Y I+     G         +D +SG + TT  L+  E   +Y   V A 
Sbjct: 638 DADEGENAALKYRIFPRDFEGTLAENLPITVDEKSGWVYTT-HLLDRETNPKYQFQVVAE 696

Query: 130 DTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           D G    S T   V  +   N   P+F    YDV +SE    G  + + +AT
Sbjct: 697 DGGDPPKSATASVVVTIQDVNDNEPIFHPKQYDVVISEDSPPGTPLTTVMAT 748



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V +   LDR+  NP K++FQV+A +      S   S+ V + D+NDN    P+  P Q 
Sbjct: 674 WVYTTHLLDRET-NP-KYQFQVVAEDGGDPPKSATASVVVTIQDVNDNE---PIFHPKQY 728

Query: 62  QAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGK 115
               +        +  + ATD D   N  + Y I  VS     +F I   SG  + T  +
Sbjct: 729 DVVISEDSPPGTPLTTVMATDPD--ENPRLHYEI--VSGNLRGRFAIATHSGKGLVTVAQ 784

Query: 116 LIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            +  +Q   + ++V ATD+GG S    + V+V    N  +P+F    Y  ++ E A + S
Sbjct: 785 PLDYKQEKRFILSVTATDSGGLSDTATIYVNVTDA-NNFAPIFDNAPYTASIYEDAPVGS 843

Query: 173 TVATITVS 180
           TV  ++ +
Sbjct: 844 TVLVVSAT 851



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 16/177 (9%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTV----NLNDINDNAPRLPMIPPIQIQAGEARRQIVKI 73
           +F   V A +  G + +  + + V    N   I DNAP    I     +       ++ +
Sbjct: 793 RFILSVTATDSGGLSDTATIYVNVTDANNFAPIFDNAPYTASI----YEDAPVGSTVLVV 848

Query: 74  EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ATD D+G NA ITYS+   S  G   +F I+ +SG I TT  L    Q  Y +TV A D
Sbjct: 849 SATDGDVGQNALITYSL--ASGYGDASEFTINAQSGAIVTTKALDREVQSGYLLTVTARD 906

Query: 131 TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G    S  T VE+S+    N  +P F   +Y  +VSE A   ++V  ++ S   SG
Sbjct: 907 GGNPPLSDTTDVEISIT-DINDNAPQFFNASYYGSVSEDALTGTSVLQVSASDADSG 962



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 15/145 (10%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEA----RRQIVKIEATDNDLGVNAEITYSIYHV 93
           SL V + D NDN P+          A +     R  I  I+ATD D G+NA + Y+I   
Sbjct: 490 SLVVKVLDDNDNYPQFSERAYTANVAEDLNPNQRPVISTIKATDADQGLNAVVRYAIIGG 549

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS----SQTIVEVSVVPG 147
           +  G  +F ID ++G +     L   A   Y + ++A D G  S    +Q +V V  V  
Sbjct: 550 NTQG--QFSIDSQNGEVSLVKSLDYEAMRSYRLMIRAQDGGNPSRSNTTQLLVNVKDVND 607

Query: 148 --PNTRSPVFQQNTYDVNVSEGASI 170
             P   + +FQ++  + NV+ G SI
Sbjct: 608 NPPRFYTSLFQESVLE-NVAVGYSI 631


>gi|328710949|ref|XP_001947627.2| PREDICTED: protocadherin-like wing polarity protein stan-like isoform
            3 [Acyrthosiphon pisum]
          Length = 3166

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V+ + LDR+  +   +   V AR+      S    + +++ DINDNAP+          
Sbjct: 884  IVTTKALDREVQS--GYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASYYGSV 941

Query: 63   AGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            + +A     ++++ A+D D G+N  I Y++    + G+  F IDP SG++ T   L    
Sbjct: 942  SEDALTGTSVLQVSASDADSGLNGRIKYAL----DDGVEAFVIDPTSGILRTAASLDRES 997

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              QY+I V A D G  S  T V V++ +   N   PVF+ +   + + E + I STV  +
Sbjct: 998  IPQYNIHVFAIDKGSPSLSTAVPVTIRIEDVNDSPPVFESDKLVMYIPENSPIGSTVGEL 1057



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 17/180 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIP 57
           LV +  +LDR+  +    R  VIA +     ++   +L VN+ D ND++P       M  
Sbjct: 339 LVTTLVSLDREFMDVHYLR--VIAIDTSSHPSTATTTLQVNVVDANDHSPVFESASGMYE 396

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIET 112
               ++      I+ I ATD D+GVN++I YSI  +S  G++      F ID RSGV+  
Sbjct: 397 ASVRESVSVGTTIITIRATDLDIGVNSQIEYSIESISGGGINSSADETFGIDLRSGVVSV 456

Query: 113 TGKLI--AGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              L     E Y++ V+A+D       + S     V  V   N   P F +  Y  NV+E
Sbjct: 457 RRNLDREVCEVYTVMVKASDQAAPPSPRRSAIASLVVKVLDDNDNYPQFSERAYTANVAE 516



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 15/172 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D+NDN PR    +     ++       IV+++A 
Sbjct: 578 YRLMIRAQDGGNPSRSNTTQLLVNVKDVNDNPPRFYTSLFQESVLENVAVGYSIVRVQAY 637

Query: 77  DNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLIAGE---QYSITVQAT 129
           D D G NA + Y I+     G         +D +SG + TT  L+  E   +Y   V A 
Sbjct: 638 DADEGENAALKYRIFPRDFEGTLAENLPITVDEKSGWVYTT-HLLDRETNPKYQFQVVAE 696

Query: 130 DTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           D G    S T   V  +   N   P+F    YDV +SE    G  + + +AT
Sbjct: 697 DGGDPPKSATASVVVTIQDVNDNEPIFHPKQYDVVISEDSPPGTPLTTVMAT 748



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            V +   LDR+  NP K++FQV+A +      S   S+ V + D+NDN    P+  P Q 
Sbjct: 674 WVYTTHLLDRET-NP-KYQFQVVAEDGGDPPKSATASVVVTIQDVNDNE---PIFHPKQY 728

Query: 62  QAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGK 115
               +        +  + ATD D   N  + Y I  VS     +F I   SG  + T  +
Sbjct: 729 DVVISEDSPPGTPLTTVMATDPD--ENPRLHYEI--VSGNLRGRFAIATHSGKGLVTVAQ 784

Query: 116 LIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            +  +Q   + ++V ATD+GG S    + V+V    N  +P+F    Y  ++ E A + S
Sbjct: 785 PLDYKQEKRFILSVTATDSGGLSDTATIYVNVTDA-NNFAPIFDNAPYTASIYEDAPVGS 843

Query: 173 TVATITVS 180
           TV  ++ +
Sbjct: 844 TVLVVSAT 851



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 16/177 (9%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTV----NLNDINDNAPRLPMIPPIQIQAGEARRQIVKI 73
           +F   V A +  G + +  + + V    N   I DNAP    I     +       ++ +
Sbjct: 793 RFILSVTATDSGGLSDTATIYVNVTDANNFAPIFDNAPYTASI----YEDAPVGSTVLVV 848

Query: 74  EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            ATD D+G NA ITYS+   S  G   +F I+ +SG I TT  L    Q  Y +TV A D
Sbjct: 849 SATDGDVGQNALITYSL--ASGYGDASEFTINAQSGAIVTTKALDREVQSGYLLTVTARD 906

Query: 131 TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G    S  T VE+S+    N  +P F   +Y  +VSE A   ++V  ++ S   SG
Sbjct: 907 GGNPPLSDTTDVEISIT-DINDNAPQFFNASYYGSVSEDALTGTSVLQVSASDADSG 962



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 15/145 (10%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEA----RRQIVKIEATDNDLGVNAEITYSIYHV 93
           SL V + D NDN P+          A +     R  I  I+ATD D G+NA + Y+I   
Sbjct: 490 SLVVKVLDDNDNYPQFSERAYTANVAEDLNPNQRPVISTIKATDADQGLNAVVRYAIIGG 549

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS----SQTIVEVSVVPG 147
           +  G  +F ID ++G +     L   A   Y + ++A D G  S    +Q +V V  V  
Sbjct: 550 NTQG--QFSIDSQNGEVSLVKSLDYEAMRSYRLMIRAQDGGNPSRSNTTQLLVNVKDVND 607

Query: 148 --PNTRSPVFQQNTYDVNVSEGASI 170
             P   + +FQ++  + NV+ G SI
Sbjct: 608 NPPRFYTSLFQESVLE-NVAVGYSI 631


>gi|410949761|ref|XP_003981586.1| PREDICTED: cadherin-18 isoform 2 [Felis catus]
          Length = 574

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKP 334

Query: 116 LIAGEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L   ++  Y++T++  +T         G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLTIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|410949641|ref|XP_003981529.1| PREDICTED: protocadherin Fat 2 [Felis catus]
          Length = 4376

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +  A+   V + + + DINDN+P+   +    
Sbjct: 2991 WRIFSRKTLDRE--HTAKYLLRITASDGKFQAS---VLVEIFVLDINDNSPQCSQL---- 3041

Query: 61   IQAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+    I      +++ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3042 LYTGKVSEDISPGHFILQVSATDLDSETNAQITYSLH---GPGADEFKLDPHTGELTTLT 3098

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3099 ALDREKKDTYSLVAKATDGGGQSCQADVTL-YVEDVNDNAPSFFPSHCAVAVFDNTTVKT 3157

Query: 173  TVATI 177
             VA +
Sbjct: 3158 PVAVV 3162



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
            KF   V    K  ++ S   ++ VN+ D+N++ PR P  +     ++       ++ + A
Sbjct: 3313 KFFLSVECSRKGSSSLSDMTTIVVNITDVNEHRPRFPQDLYTTRVLENAAVGDVVLTVSA 3372

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  VN+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ ++ATD+G
Sbjct: 3373 TDEDGPVNSAITYSL--VGGNQLGHFTIHPKKGELQ-VAKALDWEQTSSYSLRLRATDSG 3429

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                    ++++ V   N   P F Q  Y  +V E + I S V  + +S
Sbjct: 3430 RPPLHGDTDIAIQVVDVNDNPPRFFQLNYSTSVQENSPIGSKVLQLILS 3478



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P     P    IQ G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2083 VSIEDVNDNHPEFKHAPYYTVIQDGTEPGDVLCQVSATDQDLGVNGAVTYAFAE----DY 2138

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  + QT  EV +V   N  +P+FQ
Sbjct: 2139 AYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPTLQTEEEV-LVTVRNKSNPLFQ 2197

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2198 TPYYKVRVPENITLYTPI 2215



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 21/154 (13%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D+NDN P         RLP     +  +      + ++ A+D D G+N  +TYS
Sbjct: 1253 VVVRILDVNDNPPVFSHKLFNVRLP-----ERLSPATPGPVYRLVASDPDEGLNGRVTYS 1307

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
            I   S+ G   F IDP +G++ ++    AGE   +T++ATD+G    S+   + +  +P 
Sbjct: 1308 IEE-SDEG--SFSIDPATGMVSSSNTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPQ 1364

Query: 148  PNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            P   S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1365 PRPSSIPLAFDEAHYSFTVMETDPVNHMVGVISV 1398



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+ + D+NDNAP   P    + +      
Sbjct: 3100 LDRE----KKDTYSLVAKATDGGGQSCQADVTLYVEDVNDNAPSFFPSHCAVAVFDNTTV 3155

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI  E   ++   E   +
Sbjct: 3156 KTPVAVVLARDPDQGANAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLRVKPQEALEL 3212

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G +   PVF    + V V E A + + V   AT+T
Sbjct: 3213 TVRASDLGSPIPLSTLGTVTVSVV-GLDDYLPVFLSTEHSVQVPEDAQLGTEVLQLATLT 3271



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2562 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2619

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++P +GV++    L+  E
Sbjct: 2620 QSNVSKDSPVIQVLAYDADEGRNADVTYSVDSVEDLDEEVIEVNPTTGVVKVKESLVGLE 2679

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     ++V + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2680 NRAFDLKIKAQDGGPPHWNSLVLLRLQVVPNEVSLPKFSEPLYTFSASEDLPEGSEIGSV 2739



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ A D D G NAE+ YS    ++ G   F I+   G+I    KL       YS+TV
Sbjct: 1598 ELLQVRAMDGDRGANAEVRYSFLKGNSEGF--FNINALLGIITLAQKLDQANHARYSLTV 1655

Query: 127  QATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +A D G      +  V ++V P  ++ +P+F +  Y V + E   + S V  ++ +
Sbjct: 1656 KAEDQGSPQWHDLATVIINVYPS-DSSAPIFSKAEYFVEIPESIPVGSPVLLVSAT 1710



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2808 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPADP 2867

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2868 GSNIHELFAIDSETGWITTLQELDCETRQTYRFYVVAHDHGRTIQLSSQVLVEVSIT-DE 2926

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2927 NDNAPRFASEDYRGSVVENSEPGELVATL 2955



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPP--IQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   QI   +  E    I +++A D D   N  + Y++  +
Sbjct: 831 LTVNVKDWNDNAPRF---PPGGYQITVSENAEVGTTIAELKAKDADSDDNGRVRYTL--L 885

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 886 SPT--EKFSLHPLTGELAVTGHLDRESEPQYILKVEARDQPRKGHQ 929



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN PR+  P+  P   +       +++++A 
Sbjct: 1128 YWLTVLAVDRGSIPLSSVTEVYIEVKDVNDNPPRMSRPVFYPSVREDAPLHTSVLQLDAW 1187

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   +N G   F + P +G++ T  +L     +++ + V   D G  
Sbjct: 1188 DPDSSSKGKLTFNITGGNNMGF--FVLHPLTGLLSTARQLDRENKDEHILEVTVLDNGEP 1245

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            S ++   V V +   N   PVF    ++V + E  S
Sbjct: 1246 SLKSTSRVVVRILDVNDNPPVFSHKLFNVRLPERLS 1281



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    +  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2282 TVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGS 2341

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L    Q  + + V+A D G    + +T+V V+ V   N  
Sbjct: 2342 DISKFFQINGSTGEMSTVQELDYETQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2400

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2401 PPEFRQPQYEANVSELATCGHLVLKV 2426



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ +++ D N++AP              IPP           
Sbjct: 452 HYQLHIRTSPGLAST---TVVIDIVDCNNHAPIFNRSSYDGTFDENIPP--------GTS 500

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           I+ + ATD D G N  ITYSI   S      F IDP  G+I T+  +   +    Y+  V
Sbjct: 501 ILTVTATDRDHGENGYITYSI---SRPKAVPFSIDPYLGIISTSKPMDYELMKRIYTFRV 557

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVS+   +   N   P+F+Q     ++ E   +  ++ T++
Sbjct: 558 RASDWGSPFRQE-KEVSISLRLKNLNDNKPMFEQVNCTGSIHEDWPVGKSLMTVS 611



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   +      F++DP SGV+ T GKL  G    Q+++
Sbjct: 1491 ELLRVQATDPDKGKG--LIYTIHGSQDPASASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1548

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            TV   D      +  V VS+ V   N   P F Q  Y+ +V +
Sbjct: 1549 TVMVRDQEMPIKRNFVWVSIHVEAGNLHPPHFTQLYYEASVPD 1591



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   ++ G   F I+  +G++     L   A   Y + V 
Sbjct: 759 LARLAATDPDTGFNGKLVYVIADGNDEGC--FDIELETGLLTVAAPLDYEATRFYILNVT 816

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y + VSE A + +T+A +
Sbjct: 817 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQITVSENAEVGTTIAEL 867



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 10/104 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NA+  Y+     N
Sbjct: 158 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAKFYYAF----N 212

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
           T    F I P SGV+   GKL      +Y + V A D   K S+
Sbjct: 213 TRSETFAIHPTSGVVTLAGKLNVTWRGRYELQVLAVDRMRKISE 256



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 24/158 (15%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARR 68
            F+F V   + QG     A  PV +T+N+ D+ND+ PR         ++ PI         
Sbjct: 1861 FQFSVYVHD-QGNPILFAPRPVQVTINVKDVNDSPPRFSDQVYEVVIVKPIH-----RGM 1914

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            +++ ++A D+D    +E+TY I   +        I P +G I        G    +T++A
Sbjct: 1915 ELLIVQANDDD----SEVTYGIK--TGNADEAVAIHPITGRISVLNPAFLGVSRELTIRA 1968

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +D G      +V++S+    NT S  F Q  Y   V E
Sbjct: 1969 SD-GLYQDTALVKISLAQALNT-SLQFDQVVYKATVKE 2004



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2238 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2296

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2297 FSQLVYTTSVSEGLPAQTPVIQLLASDQDSG 2327


>gi|354482507|ref|XP_003503439.1| PREDICTED: cadherin-18-like [Cricetulus griseus]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 35/195 (17%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETT 113
           P   Q G A   + KI+A D D G NA++TYSI   +  G+  F I    D R G++   
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSI--TNGDGIGVFSISTDKDTREGILSLK 332

Query: 114 GKL-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
             L           I G    +  + +  G     T++++ V  G     P F   +Y +
Sbjct: 333 KPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPHFSMPSYVM 390

Query: 163 NVSEGASINSTVATI 177
           +V E A + + V T+
Sbjct: 391 DVYENAKVGTIVGTV 405


>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
            vitripennis]
          Length = 4967

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 11/167 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   V+A +      S    + V++ D N++APR      + P+  +     ++I ++ A
Sbjct: 2964 YSLYVVATDNGRPPLSSKTLVYVSIVDSNNHAPRFEQRAYLYPVP-EGYPTNKKIAQVHA 3022

Query: 76   TDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---GEQYSITVQATDT 131
            +D+ D GVNAEI Y++   +  G   F ++P SG +     L+    G  +S+ ++ATD 
Sbjct: 3023 SDDEDFGVNAEIEYTV--AAGNGSEYFFVEPESGWLYVNKSLVEFRIGSAFSLKIRATDK 3080

Query: 132  G-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G    S  +    VV G N  +P F   +Y V V E   +N+T+ T+
Sbjct: 3081 GVPPQSDEVWATLVVTGENRHAPTFVAVSYQVRVPENEPVNTTILTV 3127



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            +V+ E LDR+      +   ++A++   T   +  V+LT+ + D+NDNAPR   P     
Sbjct: 2425 IVTLERLDRE--QTAVYHLTLVAQDSSPTEPKAAAVNLTITVTDLNDNAPRFASPRYTAY 2482

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               +      +   +ATD+D G N+ I Y ++   +   H+F +DP SGVI    KL +G
Sbjct: 2483 VPDSTGKGDFVFGAKATDDDDGDNSRIVYRLHGKDS---HRFAVDPHSGVIRALEKLASG 2539

Query: 120  --EQYSITVQATDTG 132
                Y + ++A D+G
Sbjct: 2540 GRSMYQLQIEAFDSG 2554



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 11/174 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQ----IQAGEARRQIVK-IEA 75
           V AR+           +TVNL D ND+ P  +    PP      +    A+  IV  +  
Sbjct: 297 VFARDHGSPRQDGRTYVTVNLLDANDHDPEIKFTYFPPTTGFATVDENAAKDSIVAAVGI 356

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS-GVIETTGKLIAGE--QYSITVQATDTG 132
            DND G+N E T  I   +  G  +   + ++  ++   GKL   E   Y++T+ ATD G
Sbjct: 357 IDNDEGLNGETTVEIRAGNELGHFQLGHNTQNFHIVRVNGKLDREEIPMYNLTIVATDKG 416

Query: 133 GK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               S T   V  V   N   PVFQQ+ Y   +SE + I S VA+I+ +   SG
Sbjct: 417 SPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDADSG 470



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 12/143 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
            V ++V ++D+NDN P+   +P  ++Q  EA     Q++++  +D D G+N ++ YS+ + 
Sbjct: 1166 VKVSVYISDVNDNTPQFKRLP-YRVQVSEAALVGTQLLRVYTSDADEGLNGDVFYSLENE 1224

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + G  +F ID  +G I    +L     + Y +TV A D G +   SS   V + V+   
Sbjct: 1225 QHDG--QFTIDEATGQISLARELDRETRDNYHLTVVAHDAGIESRLSSSATVHIEVL-DE 1281

Query: 149  NTRSPVFQQNTYDVNVSEGASIN 171
            N  +P F  N   ++V E A +N
Sbjct: 1282 NDNTPRFVDNKPRISVLETAPVN 1304



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 69/158 (43%), Gaps = 27/158 (17%)

Query: 37   VSLTVNLNDINDNAPRLPM-----------IPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            + L VN+ D NDNAP +              PP+ +          KI A D D G N E
Sbjct: 2667 IQLLVNVTDANDNAPVMDSAVYNASVPEEEYPPLFV---------TKISAKDADSGSNGE 2717

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG-KSSQTIVEV 142
            +T   YH+ N     F ID  SG I T  KL   E   Y + V+A D G  + + T   +
Sbjct: 2718 VT---YHLMNDFDETFVIDEESGEISTNAKLDREEISSYELIVEARDRGTPQLTGTATVL 2774

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V   N   P F +  + VNV+E + I + V  IT S
Sbjct: 2775 VTVLDKNDNPPRFTR-LFSVNVTENSEIGAFVIRITSS 2811



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEAT 76
           +   ++A +K     S    L +++ND+ND+ P         +  +       +  I AT
Sbjct: 406 YNLTIVATDKGSPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISAT 465

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--- 133
           D D G+NA I Y     S    + F ID  +G++ T   L    Q S+ ++     G   
Sbjct: 466 DADSGLNARIYYDFE--SGNEQNWFAIDQDTGLVTTVATLDREIQGSVELKVLARDGGPN 523

Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            K   T + V+++   N  +P F QN  +V +SE    NS VAT++
Sbjct: 524 PKYVSTHLRVTIL-DENDEAPKFSQNIVEVTLSENTPANSLVATLS 568



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 26/190 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPI 59
           +V+ +E L  D       RF ++    Q T    P+ + + + DINDNAP+ P   I   
Sbjct: 57  MVLDREALPSD-------RFDLVVLSSQPT---YPIEVRILVLDINDNAPQFPESSISVT 106

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------E 111
             ++  A  +++   ATD D   N  +T   + V+     KFR+      I        E
Sbjct: 107 FSESATAGTKLLLDAATDKDTPENG-VTDDYFIVNGNTDAKFRLSVTGNPIGETSYLHLE 165

Query: 112 TTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           TTGKL     E Y + V A D G   K    +V V+V+   N   P+FQQ+ Y V ++E 
Sbjct: 166 TTGKLDREQVEYYHLNVCARDKGRPPKLGCLMVNVTVL-DVNDNPPIFQQSDYVVTLNES 224

Query: 168 ASINSTVATI 177
           A++ + V T+
Sbjct: 225 AAVGTHVLTV 234



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 15/185 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGE 65
            LDR+      +  +V AR   G A  V  +  + + DINDN PR P       + ++   
Sbjct: 824  LDRE--EQAYYSLKVSAR--AGLAYGV-TTANITILDINDNPPRFPTEEREEEVFLKEWA 878

Query: 66   ARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQY 122
            A  Q V +  A D D G NA I+YS+    N G  +FRI   +G+I      K   G   
Sbjct: 879  AVGQEVCLARARDRDAGANARISYSL--TRNPG-QQFRIAENTGIIYLHKPIKSAPGTVL 935

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             + V A D+G +S     ++ V +   N  +PVF+  +Y+ ++SE   +N     +  S 
Sbjct: 936  HLEVTAMDSGVQSLSATQQIRVIIEDVNDHTPVFKLTSYESSLSESTPVNERFFALLASD 995

Query: 182  LASGC 186
            +  G 
Sbjct: 996  IDLGA 1000



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATD 77
            +   V AR++     +   ++ V + D NDN PR   +  + + +  E    +++I ++D
Sbjct: 2753 YELIVEARDRGTPQLTGTATVLVTVLDKNDNPPRFTRLFSVNVTENSEIGAFVIRITSSD 2812

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS 135
             D+G NA ++YS    +    +KF IDP SG +   G L     ++Y + V   D G   
Sbjct: 2813 QDIGANANVSYSF---TGNPSNKFAIDPLSGNVTVAGHLDREVQDEYLLKVTVGD-GAWG 2868

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++T + ++ +   N   P F++ TY  +  E
Sbjct: 2869 AETPLTIT-IQDQNDNPPEFEEETYHFHFPE 2898



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRL----PMIPPIQIQ 62
            LDR+  +   +   V+A +  G  + +  S TV++   D NDN PR     P I    ++
Sbjct: 1245 LDRETRD--NYHLTVVAHDA-GIESRLSSSATVHIEVLDENDNTPRFVDNKPRIS--VLE 1299

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--E 120
                  ++++  ATD+DLG N+E+T++I   +      F +DP +G +     L     E
Sbjct: 1300 TAPVNVELLRFRATDSDLGANSELTFAI--SAGNRRDAFHVDPATGALYLRKPLDYEDIE 1357

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y + V  +D G     +++ + V V   N   PVF        + EG  ++  V T+T 
Sbjct: 1358 VYHLNVTCSDAGHPRLSSVITLRVDVIDTNDNPPVFPNTAIVRQIVEGIPVHRPVVTVTA 1417

Query: 180  SRLASG 185
                SG
Sbjct: 1418 VDPDSG 1423



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG 64
            K  LDR+  +   +  +V A ++     S  V + V++ D NDNAP+         ++  
Sbjct: 1028 KNVLDREEQD--YYALEVTASDQGNPKRSSTVPVVVHIIDENDNAPQFSNSSFTFHLREN 1085

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK-------L 116
            E     V K+ A+D D+G NA++T+S+     +    F +DPR+G I++          L
Sbjct: 1086 EPADTFVGKLLASDRDVGRNADLTFSL----PSSQQDFVVDPRNGFIKSMHPFDREQLVL 1141

Query: 117  IAGEQY-SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              G  + S+     D G    +  V+VSV +   N  +P F++  Y V VSE A + + +
Sbjct: 1142 STGSNFISLEASVIDNGVNRLKDRVKVSVYISDVNDNTPQFKRLPYRVQVSEAALVGTQL 1201

Query: 175  ATITVSRLASG 185
              +  S    G
Sbjct: 1202 LRVYTSDADEG 1212



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 12/148 (8%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++  +N+  P+   P+      ++ E    +  ++ATD D GV+ ++ Y     SN
Sbjct: 3267 TVLVHITGVNEFYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDAGVDGKVFYLFVGSSN 3326

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGG----KSSQTIVEVSVVPGPN 149
                 F I P +G+I  + +L    Q    +TV A +TGG     + +  V +S+  G +
Sbjct: 3327 D--RGFSIGPETGIISVSRRLDRETQNRAILTVMAKNTGGIRGNDTDEAQVIISIQDGND 3384

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F Q  Y+ +VSEG S+ S + T+
Sbjct: 3385 --PPEFLQTLYEASVSEGESVGSRIVTV 3410



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 18/173 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP------RLPMI 56
           +++K  LDR+     ++R  VIAR++     S   ++ + L D+NDN P          +
Sbjct: 605 LMTKITLDRESVE--EYRVLVIARDQGTPPQSSTATVLLTLEDVNDNPPVFYPTNYFFTV 662

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P    Q       I K+ ATD D   NA++ YS+    + G   F +D R+G +   G L
Sbjct: 663 P----QDATPGTLIGKVFATDADAKENAQVRYSL---ESGGDGFFSVDERTGDVFLQGAL 715

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF-QQNTYDVNVSE 166
               +  + +TV A DTG +S+     V ++   N     F   N Y   V+E
Sbjct: 716 RQAHKILFELTVSAKDTGDRSAVKNAVVEILREENLEQLEFGAYNGYQFKVTE 768



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR-RQIVKIEATDNDL-GVNAEITYSIYHV 93
            V+L++ + D NDNAP          +     R  ++ ++ A D D  G N++I+Y++  +
Sbjct: 1820 VTLSILVTDTNDNAPSFQATAYSFDVLENVPRGSRVGQVVANDADAPGPNSQISYAL--I 1877

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVEVSVVPGPN 149
            S+     F ++P +GV   T  L     + Y + VQATD G    SS   V  +VV   N
Sbjct: 1878 SDWANDVFSLNPSTGVFTLTASLDYEQVQHYILVVQATDGGLPALSSTVTVYCNVV-DLN 1936

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +P+F+       + E A+I S V + + S L SG
Sbjct: 1937 DNTPIFEAGPRSAELMENATIGSVVLSASASDLDSG 1972



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 6/146 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            + +T++L D+ND +P         I    A   +V  ++A D D G N  + Y++     
Sbjct: 2033 IQVTISLLDVNDQSPEFVSSNQTSILENAAINSVVMAVKAVDKDEGRNGYVEYALEF--G 2090

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
             G   F +    GV+   G L   ++  Y++ + A D G  +  T+  V + V   N  S
Sbjct: 2091 HGSLPFSLGAVDGVLRVAGPLDREQRANYTLRLIAKDRGEPARSTLQTVQLLVLDENDNS 2150

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P+F    Y  +V+E ASI ++V  ++
Sbjct: 2151 PIFDPRQYSASVAENASIGASVLQVS 2176



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 38/159 (23%)

Query: 41   VNLNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            V + D+NDNAP         LP+   I  Q G    Q+ +++A D D   N  ++Y +  
Sbjct: 1492 VIVTDVNDNAPIFVSMSAAVLPIKSSIAYQPGR-ELQVAQLQARDLDSSTNGLVSYELLR 1550

Query: 93   VSNTGLHKFRIDPRSG-----------VIETTGKLIAGEQYSITVQATDTGG----KSSQ 137
            +       FRI  ++G           V E   KL  G      V+ATD  G    +SS+
Sbjct: 1551 LGANYSDMFRIHRKTGALTMRLPRSPLVFERISKLQVG------VRATDEAGQAERRSSE 1604

Query: 138  TIVEVSVVPGPNTRSPVFQQ------NTYDVNVSEGASI 170
            T + + ++PG    SP+++       + Y+ N + GASI
Sbjct: 1605 TYLTL-ILPGEGDDSPIWEHGGQLEGSVYE-NEAAGASI 1641



 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 10/183 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV +   LDR+    G    +V+AR+       V   L V + D ND AP+      +++
Sbjct: 496 LVTTVATLDREIQ--GSVELKVLARDGGPNPKYVSTHLRVTILDENDEAPKFSQ-NIVEV 552

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
              E   A   +  + A DND G N  + YS++ +V       F +D  +G + T   L 
Sbjct: 553 TLSENTPANSLVATLSAVDNDQGTNGSVAYSLHPNVLRDYPKTFALDALTGQLMTKITLD 612

Query: 118 --AGEQYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             + E+Y + V A D G    S T   +  +   N   PVF    Y   V + A+  + +
Sbjct: 613 RESVEEYRVLVIARDQGTPPQSSTATVLLTLEDVNDNPPVFYPTNYFFTVPQDATPGTLI 672

Query: 175 ATI 177
             +
Sbjct: 673 GKV 675



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 19/170 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+      +  ++IA+++   A S   ++ + + D NDN+P   +  P Q  A  A  
Sbjct: 2111 LDRE--QRANYTLRLIAKDRGEPARSTLQTVQLLVLDENDNSP---IFDPRQYSASVAEN 2165

Query: 69   -----QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQ 121
                  ++++ A D D G N  + YSI   +      F I   +GVI     L      +
Sbjct: 2166 ASIGASVLQVSALDRDEGANGRVRYSI--AAGDDNRDFTISEDAGVIRVAKNLNFERKAR 2223

Query: 122  YSITVQATDT----GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            Y + VQA D     GG++     EV + +   N  +PVF  + Y  +V E
Sbjct: 2224 YRLQVQAEDCAPELGGEALVDAAEVVINLLDINDNAPVFLDSPYLAHVME 2273



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 33/180 (18%)

Query: 17   GKFRFQV----IAREKQGTAASVPVSLTVNLNDINDNAPRL-----------PMIPPIQI 61
             ++R QV     A E  G A      + +NL DINDNAP              M+PP   
Sbjct: 2222 ARYRLQVQAEDCAPELGGEALVDAAEVVINLLDINDNAPVFLDSPYLAHVMENMLPP--- 2278

Query: 62   QAGEARRQIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLI 117
                    +++++A D D    N ++ Y +    +T L  FRI+  +G   ++    + +
Sbjct: 2279 ----GGGFVMQVKAYDADTPPYNDQVRYFLKE-GDTDL--FRINASTGDIFLLRPLDREL 2331

Query: 118  AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
              E Y +T+ A DTG    +   IV V VV   N  SP F +  Y  +V+E     + VA
Sbjct: 2332 VSE-YVLTLVAMDTGSPPLTGSGIVRV-VVLDVNDHSPEFNRQEYRASVTENLPAGAWVA 2389



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEA-RRQIVKIEATDNDLG-VNAEITYSIYHVSNTGL 98
            +++ D ND    L  +    +  GE+   +IV + A D D+   N + +YSI    N G 
Sbjct: 3377 ISIQDGNDPPEFLQTLYEASVSEGESVGSRIVTVRAIDKDVRPQNNQFSYSIIG-GNVG- 3434

Query: 99   HKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
              F++DP+SG IE T K +  E    Y + + A DTG   ++    V++ ++   N   P
Sbjct: 3435 QAFKVDPQSGDIE-TAKFLDRESVPSYELIIGAIDTGSPPQTGSATVKIELL-DVNDNGP 3492

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF        VSE     +++ T++ +
Sbjct: 3493 VFDPTDVIGYVSENEPAGTSIMTLSAT 3519



 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 11/172 (6%)

Query: 16   PGK-FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVK 72
            PG     +V A +    + S    + V + D+ND+ P  +L        ++     +   
Sbjct: 931  PGTVLHLEVTAMDSGVQSLSATQQIRVIIEDVNDHTPVFKLTSYESSLSESTPVNERFFA 990

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + A+D DLG N  I YS   V++  L ++F I P  G +     L   EQ  Y++ V A+
Sbjct: 991  LLASDIDLGANGRIFYS---VTDGNLENRFGIFP-DGQLYVKNVLDREEQDYYALEVTAS 1046

Query: 130  DTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G  K S T+  V  +   N  +P F  +++  ++ E    ++ V  +  S
Sbjct: 1047 DQGNPKRSSTVPVVVHIIDENDNAPQFSNSSFTFHLRENEPADTFVGKLLAS 1098


>gi|395833104|ref|XP_003789585.1| PREDICTED: cadherin-18-like [Otolemur garnettii]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGVGVFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTIVGTV 405


>gi|355749836|gb|EHH54174.1| Cadherin-14 [Macaca fascicularis]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|301770757|ref|XP_002920796.1| PREDICTED: protocadherin Fat 2-like [Ailuropoda melanoleuca]
 gi|281339749|gb|EFB15333.1| hypothetical protein PANDA_009583 [Ailuropoda melanoleuca]
          Length = 4351

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + S++ LDR+  +  K+  ++ A + +  A+   V + + + D+NDN+P+   +    
Sbjct: 2966 WRIFSRKTLDRE--HMAKYLLRITASDGKFQAS---VLVEIFVLDVNDNSPQCSQL---- 3016

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+K+ ATD D   NA+ITYS++     G  +F++DP +G + T  
Sbjct: 3017 LYTGKVSEDTSPGHFILKVSATDLDSDTNAQITYSLH---GPGADEFKLDPHTGELTTLT 3073

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3074 PLDREKKDTYSLVAKATDGGGQSCQADV-ILHVEDVNDNAPHFFPSHCAVAVFDNTTVKT 3132

Query: 173  TVATI 177
             VA +
Sbjct: 3133 PVAVV 3137



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 9/138 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN PR   +P   I Q G E    + ++ ATD DLGVN  +TY+         
Sbjct: 2058 VSVEDVNDNPPRFKHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF----AEDY 2113

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV +V   N  +P+FQ
Sbjct: 2114 AYFRIDPYLGDISLKKPFDYKALNKYHLKVIARDGGTPSLQTEGEV-LVTVRNKANPLFQ 2172

Query: 157  QNTYDVNVSEGASINSTV 174
               Y V V E  ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 21/154 (13%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D+NDN P         RLP    +          + ++ A+D D G+N  +TYS
Sbjct: 1228 VVVRILDVNDNPPVFSHKLFNVRLPERLSLATPG-----PVYRLVASDPDEGLNGRVTYS 1282

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPG 147
            I   S+ G   F IDP +G++ ++    AGE   +T++ATD+G    S+   + +  +P 
Sbjct: 1283 IEE-SDEG--SFSIDPVTGMVSSSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPQ 1339

Query: 148  PNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
            P + S P+ F +  Y   V E   +N  V  I+V
Sbjct: 1340 PRSSSIPLAFDEPHYSFTVMETDPVNHMVGVISV 1373



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            KF   +    K  ++ S   ++ VN+ D+N++ PR    +     ++       ++ + A
Sbjct: 3288 KFFLSIECSRKGSSSLSDMTTIVVNITDVNEHRPRFLQDLYSTRVLENAIVGDVVLTVSA 3347

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D   N+ ITYS+  +    L  F + P+ G ++   K +  EQ   YS+ ++ATD G
Sbjct: 3348 TDEDGPANSAITYSL--IGGNQLGHFSVHPKKGELQ-VAKALDWEQTPTYSLRLRATDNG 3404

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                    ++++ V   N   P F Q  Y  +V E + I S V  + +S
Sbjct: 3405 RPPLHEDTDIAIQVVDVNDNPPRFFQLNYSTSVQENSPIGSKVLQLILS 3453



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    + +++ D+NDNAP   P    + +      
Sbjct: 3075 LDRE----KKDTYSLVAKATDGGGQSCQADVILHVEDVNDNAPHFFPSHCAVAVFDNTTV 3130

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI  E   ++   E   +
Sbjct: 3131 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLRVRPQEALEL 3187

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V VSVV G +   PVF    + V V E A + + V   AT+T
Sbjct: 3188 TVRASDLGTPIPLSTLGTVTVSVV-GLDDYLPVFLNTEHSVQVPEDAQLGTEVLRLATLT 3246



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2537 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  + +       ++P +GV++    L+  E
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYSVDSMEDLDEEVIEVNPTTGVVKVKESLVGLE 2654

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     ++V + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2655 NRAFDLKIKAQDGGPPHWNSLVLLRLQVVPNEVSLPKFSEPLYTFSASEDLPEGSEIGSV 2714



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 31/175 (17%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
            +Q+  R   G A++   ++ +N+ D N++AP              IPP           
Sbjct: 428 HYQLHIRTSPGLAST---TVVINIVDCNNHAPIFNRSSYEGTFDENIPP--------GTS 476

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
           ++ + ATD D G N  +TYSI H  +     F IDP  G+I T+  +   +    Y+  V
Sbjct: 477 VLTVTATDQDHGENGYVTYSITHPKSV---PFSIDPYLGIISTSKPMDYELMKRIYTFRV 533

Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +A+D G    Q   EVSV   +   N   P+F+Q     ++ E   +  +V T++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLKNLNDNKPMFEQVNCTGSIREDWPVGKSVMTVS 587



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ A D D G NAE+ YS+   +  G   F I+   G+I    KL       YS+TV
Sbjct: 1573 ELLQVRAMDGDRGANAEVHYSLLKGNREGF--FNINALLGIITLAQKLDQANHARYSLTV 1630

Query: 127  QATDTGGKSSQTI--VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +A D G      +  V ++V P  ++ +P+F +  Y V + E   + S +  ++
Sbjct: 1631 KAEDQGSPQWHDLATVIINVYPS-DSSAPIFSKAEYFVEIPESIPVGSPILLVS 1683



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + DINDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 2257 TVEVLVEDINDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGS 2316

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L    Q  + + V+A D G    + +T+V V+ V   N  
Sbjct: 2317 DISKFFQINGSTGEMSTVQELDYETQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2375

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 7/157 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   V+A ++     S    + + + D+NDN P++  P+  P   +       +++++A 
Sbjct: 1103 YWLTVLAVDRGSIPLSSVTEVYIEVMDVNDNPPQMSRPVFYPSVREDAPLHTSVLQLDAW 1162

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
            D D     ++T++I   +N G   F I P +G++ T  +L     +++ + V   D G  
Sbjct: 1163 DPDSSSKGKLTFNITSGNNMGF--FVIHPLTGLLSTARQLDRENKDEHILEVTVLDNGEP 1220

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
            S ++   V V +   N   PVF    ++V + E  S+
Sbjct: 1221 SLKSTSRVVVRILDVNDNPPVFSHKLFNVRLPERLSL 1257



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPP--IQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   QI   +  E    I +++A D D   N  + Y++  +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQITISEDTEVGTTIAELKAKDADSDDNGRVRYTL--L 860

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   KF + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 861 SPT--EKFSLHPLTGELAVTGHLDRESEPQYILKVEARDQPRKGHQ 904



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G + +++Y +    
Sbjct: 2783 VSVNIQVKDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPVDP 2842

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SS  +VEVS+    
Sbjct: 2843 GSNIHELFAIDSETGWITTLQELDCETHQTYHFYVVAYDHGRTIQLSSSVLVEVSIT-DE 2901

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     V T+
Sbjct: 2902 NDNAPRFASEDYRGSVVENSEPGELVVTL 2930



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1466 ELLQVQATDPDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGLGPSQHTL 1523

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            TV   D      +  V VS+ V   N   P F Q  Y+ +V
Sbjct: 1524 TVMVRDQEMPIKRNFVWVSIYVEDGNLHPPHFTQLHYEASV 1564



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 17/164 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG N++  Y+     N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNSKFYYTF----N 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGP 148
           T    F I P SGV+   GKL      +Y + V A D   K S+      +  + +   P
Sbjct: 189 TRSEMFAIHPTSGVVTLAGKLNVTWRGRYELQVLAVDRMRKISEGNGFGNLAALVIHVEP 248

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
             R P     T  V     +S  +T AT+TV   +SG  + + E
Sbjct: 249 AFRKP--PAITSVVVAPPDSSEGTTYATVTVDANSSGAVVDSLE 290



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2271

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  ++SEG    + V  +  S   SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 28/160 (17%)

Query: 19   FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRL-------PMIPPIQIQAGEARR 68
            F+F V   + QG     AS PV + +N+ D+ND+ PR         ++ PI         
Sbjct: 1836 FQFSVYVHD-QGNPILFASRPVQVIINIRDVNDSPPRFSDRAYEVAIVKPIH-----RGM 1889

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLIAGEQYSITV 126
            +++ + A+D+D    +E+ YSI     TG       I P +G I        G    +T+
Sbjct: 1890 ELLIVRASDDD----SEVNYSI----KTGNVDEAVAIHPITGRISVLNPAFLGVSRELTI 1941

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +A+D G      +V++ +    NT S  F Q  Y   V E
Sbjct: 1942 RASD-GLYQDTALVKIFLTQALNT-SLQFDQIVYRATVKE 1979



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ A D+D G N ++ Y I   +  G   F ++  +G++     L   A   Y + V 
Sbjct: 734 LARLAAIDSDTGFNGKLVYVIADGNEEGC--FDMELETGLLTVAAPLDYEATSFYILNVT 791

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y + +SE   + +T+A +
Sbjct: 792 VYDLGTPRKSSWKLLTVNVKDW-NDNAPRFPPGGYQITISEDTEVGTTIAEL 842


>gi|270008135|gb|EFA04583.1| DN cadherin-like protein [Tribolium castaneum]
          Length = 1148

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 279 LAKELDFEDLRQPHVYSLVVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 336

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D D G NAEI Y +          F +DP SG+I    +L A 
Sbjct: 337 VDEDIPPGTSILKVKAMDADSGANAEIEYLVSD------DHFSVDP-SGIISNNKQLDAD 389

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  +      V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 390 NNNAYYEFVVTAKDKGEPAKTGTATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 449

Query: 176 TITVS 180
           T+  S
Sbjct: 450 TVVAS 454



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39  LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           + V + D+NDN P         P ++  A      ++K+ ATD D GVN ++ YSI    
Sbjct: 525 VVVFITDVNDNKPIFKDCGTYYPKVEEGAPNGS-PVIKVHATDEDKGVNGQVKYSIVQQP 583

Query: 95  NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
           N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 584 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDV 642

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 643 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 674



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17  GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
           GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 612 GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 671

Query: 74  EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            A+D D   N  I YS+   SN   L  F I P SG I    K +  ++Y + V+A+D G
Sbjct: 672 SASDEDADNNGAIVYSLNAGSNAADLEYFEIQPESGWI-VLKKALDRDRYRLRVRASDRG 730

Query: 133 GKSS-QTIVEVSVVPGPNTRSPVFQQNTY 160
              S   +     V   N + P++  NTY
Sbjct: 731 EPPSFADVDVELDVVDRNNKPPLWDVNTY 759


>gi|332234692|ref|XP_003266540.1| PREDICTED: protocadherin alpha-11 [Nomascus leucogenys]
          Length = 809

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 13/165 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V L V + D+NDN P        + +    A+  +V K+ ATD D GVN E+TYS+  + 
Sbjct: 226 VQLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVIKLNATDRDEGVNGEVTYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            TG   F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 286 PTGRPLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG------CAIM 189
            SP     +  + V E    ++ +A I+VS   SG      C++M
Sbjct: 345 NSPEVTVTSLSLPVREDTQPSTVIALISVSDRDSGVNGQVTCSLM 389



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 21/130 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA----RRQI---- 70
            +FQV AR+         V+L V + D NDNAP L     +  QAG A     +Q+    
Sbjct: 530 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKQVPRSV 584

Query: 71  ------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
                  K+ A D D G NA ++Y +   ++     FR+   +G I TT  L   +  ++
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAADGSRIPFRVGLYTGEISTTRALDEADSPRH 644

Query: 123 SITVQATDTG 132
            + V   D G
Sbjct: 645 RLLVLVKDHG 654



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           ++ +V A +K     +   ++ V + D NDN+P + +     P++ +  +    I  I  
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVTVTSLSLPVR-EDTQPSTVIALISV 373

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D GVN ++T S+  HV    +  F+ +  S V+++     +   Y + V A D G  
Sbjct: 374 SDRDSGVNGQVTCSLMPHVPFKLVSTFK-NYYSLVLDSALDRESVSAYELVVTARDGGSP 432

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N   P F Q  Y V V E
Sbjct: 433 SLWATAGVSVEVADVNDNVPAFAQPEYTVFVKE 465


>gi|109076759|ref|XP_001088306.1| PREDICTED: cadherin-18 isoform 2 [Macaca mulatta]
 gi|297294025|ref|XP_002804363.1| PREDICTED: cadherin-18 [Macaca mulatta]
 gi|355691232|gb|EHH26417.1| Cadherin-14 [Macaca mulatta]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|195435720|ref|XP_002065827.1| GK20296 [Drosophila willistoni]
 gi|194161912|gb|EDW76813.1| GK20296 [Drosophila willistoni]
          Length = 4674

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 13/179 (7%)

Query: 6    KENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG 64
            ++NLDR+  P    F   V A +          +L +N+ DINDN P   +   +  Q  
Sbjct: 3223 EKNLDRETIP---MFNLTVKAEDHGVPRLYSTANLLINILDINDNPPEFSLRQYL-CQVH 3278

Query: 65   EARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AG 119
            E      ++  + AT  D+GVNA+I Y  Y +      KF ID ++G +     L     
Sbjct: 3279 ENATIGVEVCTVYATSKDIGVNADILY--YIMGGNEQRKFSIDSKTGALTLNESLDYEMS 3336

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + Y +T+QA D G      I  V++ V   N  SP F Q+ Y VNV E  ++   +AT+
Sbjct: 3337 KYYYLTIQAIDRGTPPLSNIAHVNISVLDVNDNSPKFVQDIYRVNVLEDIALGKQIATV 3395



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 8/149 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            L  +   LDR+  N  +   +V   +      +    + VN+ DINDN+P        IQ
Sbjct: 1245 LKTTARKLDRE--NQAEHILEVAISDNGSPVLASTTRIVVNVLDINDNSPEFDQRAYKIQ 1302

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +     A   I ++ A D D G N  ITYSI   S  G +KFRID  SG I  T  L   
Sbjct: 1303 VPSTATANESIFQVHAIDIDDGENGRITYSI--KSGKGKNKFRIDNASGHIFITKSLEPD 1360

Query: 120  EQYSITVQATDTG--GKSSQTIVEVSVVP 146
             ++ I ++A D G   +S  T V + V+P
Sbjct: 1361 FEFEINIRAEDNGTPKRSQTTRVNIVVIP 1389



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 11/175 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ SK   DR+     +  F ++ +   G +     +L V +NDINDN+P   +     +
Sbjct: 2600 LITSKVTFDREQ----RAEFNILLKVTDGGSKFGFSTLKVLINDINDNSPFFFLKEYKIV 2655

Query: 62   QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL- 116
             + +A+    ++ I+A DND+  N EI Y I H S     K  F I+  +G I+    L 
Sbjct: 2656 ISADAQPDDSVLLIKAMDNDIKNNGEIKYEIVHGSKDVALKDVFEIEENTGEIKLKKNLK 2715

Query: 117  -IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
                + +   V+A+D G  S  + + VS+ +  P+   P F++ +  + + E  S
Sbjct: 2716 KYENQMFQFFVRASDCGEPSFHSDIPVSIEMISPDVVIPTFEKTSIILKIIESTS 2770



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 10/165 (6%)

Query: 20   RFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEA 75
            +++++A  + G   A      + + +ND+NDNAP   M   I     +A+ Q  I K+ A
Sbjct: 3129 KYKLVAHVQDGKELAHECVSEIIITVNDVNDNAPIFSMNQYIVSIPEDAQLQTLITKVHA 3188

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG 133
            TD D GVN ++ YS+          F I   SG+I     L       +++TV+A D G 
Sbjct: 3189 TDKDFGVNRKVRYSLM---GQNYDHFEISKSSGIIRLEKNLDRETIPMFNLTVKAEDHGV 3245

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                +   + + +   N   P F    Y   V E A+I   V T+
Sbjct: 3246 PRLYSTANLLINILDINDNPPEFSLRQYLCQVHENATIGVEVCTV 3290



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 14/193 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQ 60
           ++ +K+ LD +  +        I +   G+       + +N+ D+NDN P    M   I 
Sbjct: 452 MLYTKKQLDAERKSQFTLTVSAIDQANVGSRKQSSAKVKINIQDMNDNDPIFENMNRNIS 511

Query: 61  IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I         V K+ A D D G NA I+YSI   +N     F ID  +G+I TT  LI  
Sbjct: 512 INENNLSGSFVAKVSAKDKDSGENAYISYSI---ANLNTVPFEIDHFTGIIRTTS-LIDF 567

Query: 120 E----QYSITVQATDTG-GKSSQTIVEVS-VVPGPNTRSPVFQQ-NTYDVNVSEGASINS 172
           E     Y++ ++A+D G     QT +E+S VV   N   P F++ N Y   + + A I S
Sbjct: 568 ETMRRNYALIIRASDWGLPYRRQTEIELSIVVKDINDNRPQFERINCYG-KILKSAPIGS 626

Query: 173 TVATITVSRLASG 185
            + T++     +G
Sbjct: 627 DIFTVSAIDFDNG 639



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 20/175 (11%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLN----DINDNAPRLPM-IPPIQIQAGEAR-RQIV 71
            K+ +  I    +GT    P+S   ++N    D+NDN+P+    I  + +    A  +QI 
Sbjct: 3337 KYYYLTIQAIDRGTP---PLSNIAHVNISVLDVNDNSPKFVQDIYRVNVLEDIALGKQIA 3393

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             ++A D+D G+NA++ Y+I    N G  +F ID  +G I     L      +Y++ +QA 
Sbjct: 3394 TVKAIDDDAGLNAKLHYNINGGDNFG--QFSIDEINGTICVARPLDRETKAKYNLEIQAC 3451

Query: 130  DTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            D G      S Q I+   VV   N  +PVF    Y + + E   +   + T  VS
Sbjct: 3452 DGGIPQRCGSVQIII---VVLDTNDNNPVFSSPNYTIVLQENRPLGYVLITFDVS 3503



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++ V++ D+NDN P    LP    + I  Q G     I+ ++A D D G N E+ Y +  
Sbjct: 2116 AIHVSILDVNDNCPIFVNLPYYATVSIDDQKGTV---IMHVKAIDLDTGENGEVRYEL-K 2171

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGK--SSQTIVEVSVVPGPN 149
              N  L  F++D +SG +     +    Q Y +TV A D      SS+  + V V+   +
Sbjct: 2172 KGNGEL--FKLDRKSGELSIKQHVEGHNQNYQLTVAAYDGAINPCSSEVSLNVKVI---D 2226

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVA 175
               P+F++  YDV+V E   I S ++
Sbjct: 2227 RSMPIFEKQFYDVSVKEDVEIYSVLS 2252



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 20/180 (11%)

Query: 11  RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            D   P +F ++ ++ + +     VP+  T  + +++     +P   PI +        +
Sbjct: 369 EDLGTPSRFTYKTVSIQMKPEIKHVPI-FTQEIYEVS-----IPETAPINMP-------V 415

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQA 128
           ++++ +D DLG  A +   I   +  G  +FRI+P SG++ T  +L A    Q+++TV A
Sbjct: 416 IRLKVSDPDLGKYALVYLEIVGGNEGG--EFRINPDSGMLYTKKQLDAERKSQFTLTVSA 473

Query: 129 TDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D    G   Q+  +V + +   N   P+F+    +++++E     S VA ++     SG
Sbjct: 474 IDQANVGSRKQSSAKVKINIQDMNDNDPIFENMNRNISINENNLSGSFVAKVSAKDKDSG 533



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 28/159 (17%)

Query: 29   QGT---AASVPVSLTVNLNDINDNAPRLPMIPPI-----------QIQ-AGEARRQIVKI 73
            QGT   + S   ++ V++ D+NDN PR      +           ++Q   +++   + +
Sbjct: 1783 QGTNMASGSSSQNIIVHVLDVNDNIPRFLQSEYVGTVSESATVGSRVQRMHDSKNSHLTL 1842

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
              +D D+G+N  + Y I    N  L K  F+IDP +G IET  +L      +YS  V  +
Sbjct: 1843 NVSDADVGLNGMVQYII----NDDLAKSLFKIDPTTGTIETLQRLDYEKDSRYSFYVTVS 1898

Query: 130  DTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVS 165
            D G     +I +  V   V   N   P+F +   D+NV+
Sbjct: 1899 DMGKPKLHSITKAHVIIHVSNINDCPPIFDER--DLNVT 1935



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 18   KFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKI 73
            KF   V+  +  G+   S   ++ + + D+NDNAPR   I P    ++     R Q V +
Sbjct: 2406 KFHHIVVHVKDHGSPPLSSRCNIFITVKDLNDNAPRF--IEPSFFTKLSVAAKRGQFVAL 2463

Query: 74   -EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             +A DND+     + Y I  +    L  + I+  SGVI     L   ++ +  +  + + 
Sbjct: 2464 PKAYDNDICDANNLEYKI--IYGNDLQTYNINKYSGVITLQNMLNFTDKTNTVLNISVSD 2521

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSE 166
            G  + T   + +V  P N +SP F+   Y+  +SE
Sbjct: 2522 GVHT-TYARLKIVLLPENRKSPQFENFAYEAQISE 2555



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 23   VIAREKQGTAASVPVS-LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
            V+  + QGT      + + VN++D ND+ P     +I     ++     ++ ++ A D D
Sbjct: 1576 VVFVKDQGTPGKRNYAKIIVNVHDHNDHYPEFTAKIIQSKVPESAAIGSKLTEVLAIDRD 1635

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKS 135
             G NAE+ Y I    N G   F ID   G+I   GKL     ++Y + ++A D G    S
Sbjct: 1636 SGQNAELRYFII-TGNVG-SVFAIDSTFGIITLAGKLNINNVQEYMLQIKAADQGNPSLS 1693

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            SQ  V + V    N   P F  N   + + E  S+ + V  +T
Sbjct: 1694 SQIPVHIIVTMSEND-PPKFFPNAIVLEIFENLSVGTFVTQVT 1735



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-Q 60
            +V+SK  LDR+  +  ++   + A++      S    + + ++D+NDNAP   +   I +
Sbjct: 927  IVLSKP-LDREKQD--RYALHITAKDGGTPTLSSEALVYILVDDVNDNAPVFGVQEYIFK 983

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHV-SNTGLHKFRIDPRSGVIETTGKLIA 118
            ++    R  ++  IEA D D+G NA I +S+     + GL  F++D  SG I T G L  
Sbjct: 984  VREDLPRGTVIAVIEAIDQDIGPNANILFSLKEDPQDEGL--FQVDKYSGAIRTQGYLNY 1041

Query: 119  GEQ--YSITVQATDTGGKS 135
              +  +++ V A D G  S
Sbjct: 1042 ENRQVHNLVVSAIDGGSPS 1060



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 7/120 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +  IEA D DLG N ++ + I       +  FR+DP  G ++  G L    Q  Y + + 
Sbjct: 786 VAWIEARDRDLGYNGKLVFVISDGDYDSV--FRVDPDLGELKIIGYLDRERQNEYVLNIT 843

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             D G   KS   ++ ++++   N  +PV Q++     ++E A I + +  +  +   SG
Sbjct: 844 VYDLGYPMKSQSKMLPITII-DVNDNAPVLQKSLATFRLTESARIGTVIYCLYATDADSG 902



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 13/146 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D+NDNAP L        +  E+ R    I  + ATD D GVN  ITY +    +
Sbjct: 858 LPITIIDVNDNAPVLQK-SLATFRLTESARIGTVIYCLYATDADSGVNGYITYEL----S 912

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
                F ++  +G I  +  L   +Q  Y++ + A D G    SS+ +V + +V   N  
Sbjct: 913 VDCDDFVVNKTTGCIVLSKPLDREKQDRYALHITAKDGGTPTLSSEALVYI-LVDDVNDN 971

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +PVF    Y   V E     + +A I
Sbjct: 972 APVFGVQEYIFKVREDLPRGTVIAVI 997



 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RR 68
            D      +   + A++      S  V + + + + NDN P L   P   +   E      
Sbjct: 1147 DAETKSFYWLTLCAQDNAIVPLSNCVEVYIEVQNENDNIP-LTSKPVYYVNVTEGSPENI 1205

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
            +I+K+ A D D      ITY+I  +S   +  F I+  +GV++TT + +  E   ++ + 
Sbjct: 1206 EIIKLTAIDPDRDDTQSITYNI--ISGNLVGYFEINSVTGVLKTTARKLDRENQAEHILE 1263

Query: 126  VQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            V  +D G    +S T + V+V+   N  SP F Q  Y + V   A+ N ++  +    + 
Sbjct: 1264 VAISDNGSPVLASTTRIVVNVL-DINDNSPEFDQRAYKIQVPSTATANESIFQVHAIDID 1322

Query: 184  SG 185
             G
Sbjct: 1323 DG 1324



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
            + I+K+ A D DLG+N EI YS    S      F I P +G I     L   E   + +
Sbjct: 195 HKSILKVTADDADLGINGEIYYSFLMDS----EYFAIHPTTGDITLLQPLEYAEHSSFDL 250

Query: 125 TVQATDTGGKSSQ 137
           TV A D G   +Q
Sbjct: 251 TVLANDRGSSINQ 263



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 22   QVIAREKQGT--------AASVPV-----SLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            Q + RE++ T          +VP+      + +++ D NDN P+           +  + 
Sbjct: 2809 QTLDREQKETHYLIVVAETTTVPILYAYADVVIHVRDENDNYPQFDSSFYSASVAENTDK 2868

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               IVKI ATD D G N ++ Y   + S +  + F ID  +G I     L      +Y +
Sbjct: 2869 VVSIVKITATDADSGPNGDVRYYFENDSESVSNIFDIDIYTGWITLLASLDRELRSEYDL 2928

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V ATD G       V VS+ V   N  +  F+     + VSE A
Sbjct: 2929 KVIATDNGHPKHDAKVPVSIKVVDCNDNAQQFKLPINKITVSENA 2973



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
           Y++T++A D G  S  T   VS+   P  +  P+F Q  Y+V++ E A IN  V  + VS
Sbjct: 362 YNLTLRAEDLGTPSRFTYKTVSIQMKPEIKHVPIFTQEIYEVSIPETAPINMPVIRLKVS 421


>gi|449277761|gb|EMC85812.1| Cadherin-23, partial [Columba livia]
          Length = 3246

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 11/172 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            LV S   LDR+     ++  +V+A +    + S   +LTV + D+ND +P   P I  + 
Sbjct: 896  LVTSTAVLDRE--RIAEYYLRVVASDAGVPSKSSTSTLTVKVLDVNDESPTFFPAIYNVS 953

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +    AR  ++V++  TD D+G+NAE++Y I   +  G  KF +  R GV+ T   L   
Sbjct: 954  LPENVARDFRVVRLNCTDADVGLNAELSYFITGGNQDG--KFSVGFRDGVVRTVVSLDRE 1011

Query: 120  --EQYSITVQATD---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                Y++ ++A D   TG + + T      V   N   P+F Q++Y+V+V E
Sbjct: 1012 TVASYTLILEAIDNGPTGNRRTGTATVYVTVLDVNDNRPIFLQSSYEVSVPE 1063



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 12/148 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L VN+ D+NDN P +       +   E       + ++ ATD D+G+N+ ++Y I    N
Sbjct: 1447 LRVNVLDVNDNPPVIDSPFGYNVSVSENVGGGTAVAQVRATDRDVGLNSVLSYYITR-GN 1505

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
              L  FR+D  +G I T       E+   YS+ V   D G    S+ T V V+++   N 
Sbjct: 1506 EDL-TFRMDRVTGEIATRPSPPDRERQSFYSLVVTVEDEGNPSLSATTTVYVTIL-DEND 1563

Query: 151  RSPVFQQNTYDVNVSEG-ASINSTVATI 177
             +P FQQ  Y+V + EG A++N+T+ T+
Sbjct: 1564 NTPAFQQQLYEVTLDEGPATLNATLVTV 1591



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAG-EARRQIVKI 73
            +F   V+A +K          L V + DINDN P   R P    + I+     R  + ++
Sbjct: 2498 RFNLTVVATDKGHPPLWGTTMLHVEVIDINDNRPVFVRPPNGTILHIKEEIPLRSNVYEV 2557

Query: 74   EATDNDLGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             ATD D G+N  + Y++      N     F ID  SG+I+T  +L   +Q  Y++ + A 
Sbjct: 2558 YATDKDEGLNGAVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMRLDREKQAVYNLIIVAC 2617

Query: 130  DTGGKSSQTI 139
            D G  + +T+
Sbjct: 2618 DQGQPAYETM 2627



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 16/163 (9%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            +++R    TA     ++ VNLNDINDN P    P   P  +  G+   ++    A D+D 
Sbjct: 1653 IVSRRLTSTA-----TVLVNLNDINDNCPTFPRPYEGPFDVTEGQPGPRVWTFLAHDDDS 1707

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GK 134
            G + ++ YSI  V+   L +F I P  G +          +    Y++T+ A D G    
Sbjct: 1708 GPSGQVEYSI--VAGDPLGEFVISPVEGELRVRKDAELDRENIPFYNLTIAARDRGVPPL 1765

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            SS  +V + V+   N   PV      ++ +SE   ++S V  I
Sbjct: 1766 SSTMMVGIRVL-DINDNDPVLLNLPMNLTLSENTPVSSFVTRI 1807



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 14/155 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLP--MIPPIQIQ 62
            LDR+  +   +    +AR+  G  +S      V + + + DIND  P+           +
Sbjct: 2385 LDREKKD--HYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYE 2442

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
               A   ++ + ATD D G N  +TYSI      G   F+I+  SG+I +  +L + E++
Sbjct: 2443 NEPAGTSVITMTATDLDEGDNGMVTYSI---EGPGAEAFKINKDSGLITSRRRLQSYERF 2499

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVF 155
            ++TV ATD G       T++ V V+   + R PVF
Sbjct: 2500 NLTVVATDKGHPPLWGTTMLHVEVIDINDNR-PVF 2533



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 23/174 (13%)

Query: 9   LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           LDR+ PN  +    R  V++    G     A+   ++ VNL D+NDN P    +P   +I
Sbjct: 790 LDRENPNTQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFAAEI 849

Query: 62  QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
             G  A   + ++ A D D G N ++TY +      G+ +  F I+  SG++ +T  L  
Sbjct: 850 AEGLPAGSSVFQVVAIDLDEGPNGQVTYRM----QVGMPRMDFLINSTSGLVTSTAVLDR 905

Query: 117 --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             IA  +Y + V A+D G   KSS + + V V+   N  SP F    Y+V++ E
Sbjct: 906 ERIA--EYYLRVVASDAGVPSKSSTSTLTVKVL-DVNDESPTFFPAIYNVSLPE 956



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           ++++ ATDND+G   +++Y      +    +F +D  +GVI  T +L     ++Y++T+ 
Sbjct: 429 VLQVHATDNDVGTYGKVSYFF----SDDPDRFSLDKDTGVILLTARLDFETTQRYTLTII 484

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++++   N   P FQ+  Y
Sbjct: 485 ARDGGGEETTGRVRINIL-DVNDNVPTFQKEAY 516



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 17/164 (10%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITY 88
            +A +PV L +   DINDN P     P  Q    E       I++++ATD D G  A I Y
Sbjct: 2305 SAEIPVYLQIV--DINDNNPVFSQ-PSYQKAVFEDVPLGTVILRVKATDADSGRFALIQY 2361

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-- 144
            S+      G  KF I+P +G I     L     + Y++T  A D  G  S    E SV  
Sbjct: 2362 SL----GDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARDNPGDISSNRRENSVQV 2417

Query: 145  ---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               V   N   P F ++ +  +V E     ++V T+T + L  G
Sbjct: 2418 LITVLDINDFRPQFSKSQFSTSVYENEPAGTSVITMTATDLDEG 2461



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI 61
            VV +E L  DP       F ++AR+  G  ++   SL V + D NDN P   P    +++
Sbjct: 1960 VVDREAL-LDP----CLEFTLVARDVGGLNSTA--SLAVTVLDDNDNRPVFQPASITVRL 2012

Query: 62   QAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            +        ++++ ATD D G+N ++ Y I   S     +F ID  +GVI      I  E
Sbjct: 2013 RENSPPGFSVLQVMATDADSGLNQQLDYRIEGGSQ---DRFLIDTTTGVIRVANISIDRE 2069

Query: 121  Q---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            +   Y +TV A D G  +      VS+ +   N   P F      V+V E A+  + VA 
Sbjct: 2070 ERDAYRLTVVAVDQGTPALSGTTTVSLFIDDVNDCRPEFINPIQTVSVPESAAPGTVVAE 2129

Query: 177  IT 178
            +T
Sbjct: 2130 VT 2131



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 12/185 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+         + I     G   +   ++ V + D+NDN P + +    ++   E   
Sbjct: 1008 LDRETVASYTLILEAIDNGPTGNRRTGTATVYVTVLDVNDNRP-IFLQSSYEVSVPEDIP 1066

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS-- 123
            A   IV+  ATD D GVN  + Y I  +     + FRI+P +G++    + +  EQ S  
Sbjct: 1067 AASSIVQ-AATDADEGVNGRVWYRI--IKGNEHNHFRINPSTGLVMRGVRHLDREQNSSH 1123

Query: 124  -ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
             + V+A +T     ++ V V V V   N   PVF Q  Y+ + + E A I ++VA +  +
Sbjct: 1124 VLEVEAYNTEQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRAT 1183

Query: 181  RLASG 185
               +G
Sbjct: 1184 DRDTG 1188



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARR------Q 69
           ++   +IAR+  G   +  V   +N+ D+NDN      +P  Q +A  G  R       Q
Sbjct: 478 RYTLTIIARDGGGEETTGRVR--INILDVNDN------VPTFQKEAYLGALRENEPSVTQ 529

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
           +V++ A+D D   N +ITYSI   S         +    GVI     L    +A     +
Sbjct: 530 VVRLRASDEDSSPNNQITYSIVQASAFRDYFDIAVLDGYGVISVNHPLDYEQVANGVIYL 589

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           TV A D G     + V V++ V   N   P F + +Y + V E     +TV  +  + +
Sbjct: 590 TVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKASYVIAVMEDIMAGATVLFLNATDM 648



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-----QIQA 63
           LD +    G     V+A++      +  V +T+ + D NDN P       +      I A
Sbjct: 577 LDYEQVANGVIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKASYVIAVMEDIMA 636

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
           G     ++ + ATD D          IY +   G   FRI+ RSG I TT  L   A  +
Sbjct: 637 GAT---VLFLNATDMDRSREYGQESIIYSLE--GSSHFRINARSGEITTTSLLDREAKSE 691

Query: 122 YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           Y + V+A D G     K+   +V ++++   N   P ++   Y +N+ E    NS V T+
Sbjct: 692 YILIVRAVDGGVGHHQKTGIAMVNITLL-DINDNYPTWKDEPYFINLVEMTPPNSDVTTV 750



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 21/186 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---- 57
           +V  ++ LDR+  +     F V   + QG    +  ++ + + D+NDNAPR    P    
Sbjct: 38  VVWLRQPLDRETKSEFTVEFSV--SDSQGV---IKGTVNIQVGDVNDNAPRFHNQPYSVR 92

Query: 58  -PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P     G     I  + ATD D G    + YS    SN     F ID   G++    +L
Sbjct: 93  IPENTPVGTP---IFIVNATDPDQGAGGSVLYSFQPPSNF----FAIDSGRGIVSVIREL 145

Query: 117 I--AGEQYSITVQATDTG-GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                + Y + V ATD    K   T+  +++ +       P+F    Y  N+ E +   +
Sbjct: 146 DYEVTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIFINLPYSTNIYENSPPGT 205

Query: 173 TVATIT 178
           TV  IT
Sbjct: 206 TVRMIT 211



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 14/169 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+  N   +   + AR++     S  + + + + DINDN P L  + P+ +   E   
Sbjct: 1743 LDRE--NIPFYNLTIAARDRGVPPLSSTMMVGIRVLDINDNDPVLLNL-PMNLTLSENTP 1799

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQ 121
                + +I A D D G NA +T+ I   S    + F I+  SG+I     L    +A  +
Sbjct: 1800 VSSFVTRILARDADKGPNALLTFDI--TSGNTENAFYINSTSGIIYVNRPLDRERVAEYR 1857

Query: 122  YSITVQATDTGGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGA 168
             ++TV+      ++++   ++ V  +   N   P+F Q++Y   V E +
Sbjct: 1858 LTVTVKDNPENIRNARRDFDLLVIYIADENDNRPLFTQSSYQAEVMENS 1906



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 36/177 (20%)

Query: 25   AREKQGTAASVP-VSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDN 78
            A E    + SVP   LTVN+ D+NDN PR             ++       ++ I A D 
Sbjct: 2198 ASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPFGVTYFTERILEGATEGTTLISISAVDP 2257

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATD 130
            D G N +I         T L            ++ GK++A         +  + TV+A+D
Sbjct: 2258 DKGANGQI---------TCLED----------QSAGKVVANRTVDYEEVQWLNFTVRASD 2298

Query: 131  TGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G   +S++  V + +V   N  +PVF Q +Y   V E   + + +  +  +   SG
Sbjct: 2299 NGSPRRSAEIPVYLQIV-DINDNNPVFSQPSYQKAVFEDVPLGTVILRVKATDADSG 2354



 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 5/97 (5%)

Query: 85   EITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            +ITY     +N   L  F+I+  +GVI   G++    G+ Y++TV A D G K   T+V 
Sbjct: 1280 QITYKFDPNTNAQALSLFKINGITGVITVKGQVDREKGDFYTLTVVADDGGPKIDSTVVT 1339

Query: 142  VSVVPGPNTRSPVFQ-QNTYDVNVSEGASINSTVATI 177
            ++V+   N  SP F   +   V+V+E +++   VA +
Sbjct: 1340 ITVL-DENDNSPQFDITSDSSVSVAEDSAVGKRVALV 1375


>gi|16933557|ref|NP_003728.1| protocadherin-16 precursor [Homo sapiens]
 gi|20139065|sp|Q96JQ0.1|PCD16_HUMAN RecName: Full=Protocadherin-16; AltName: Full=Cadherin-19; AltName:
           Full=Cadherin-25; AltName: Full=Fibroblast cadherin-1;
           AltName: Full=Protein dachsous homolog 1; Flags:
           Precursor
 gi|119589089|gb|EAW68683.1| dachsous 1 (Drosophila) [Homo sapiens]
 gi|168275540|dbj|BAG10490.1| protocadherin-16 precursor [synthetic construct]
          Length = 3298

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 422 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 479

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 480 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 533

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 534 ASLDYELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 593

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 594 GTCFLQVTATDADSG 608



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2344 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2398

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2399 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2454

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F  + Y V V+E     ST+ T+
Sbjct: 2455 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLSHYRVAVTEDLPPGSTLLTL 2504



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1821 FQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1879

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1880 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAA 1936

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1937 AGPLSTTVSVTITVRDVNDHAPTF 1960



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2139 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2197

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2198 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2255

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2256 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2310



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1635 LTVSVADVNDEAPTF-----QQQEYSVLLRENNPPGTSLLTLRATDPDVGANGQVTYG-- 1687

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1688 GVSS---ESFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDE 1744

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1745 NDHAPTFGSAHLSLEVPEG 1763



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 207 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 263

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D GVN  +TY I    + G   F ID  +G+++    L
Sbjct: 264 VSESLAPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 320

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 321 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 380

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 381 PGQLVARISVS 391



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 882  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 934

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 935  AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 994

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 995  GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1022



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1124 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1182

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
              D G   +S+   V V+V+   N  SP F Q
Sbjct: 1183 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1213



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 106 VLDREQRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 152

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIET------- 112
               A      +E A D D G    +    Y +S  G  + FR++ R G   T       
Sbjct: 153 PEHTAFGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGTPVPELVV 209

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 210 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 268

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 269 APGSPVLQVFASDADAGV 286



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1536 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1585

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L   +  ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1586 SGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1644

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E     +++ T+
Sbjct: 1645 EAPTFQQQEYSVLLRENNPPGTSLLTL 1671



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2672 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSVAENQPPGTLVTTL 2728

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2729 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2782

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2783 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2826



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1735 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1794

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1795 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHA 1852

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1853 PAFPVPAYSVEVPE 1866


>gi|149732826|ref|XP_001501105.1| PREDICTED: cadherin-18-like [Equus caballus]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
          Length = 4981

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E      Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATVSETATNLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDMDEGSNGLIHYSI--LKGNEERQFAIDRFSGQVTLIGKLDYEATPAYSLLIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +S+ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GAISLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   SLTVN+ D+NDN+P    +P    P  ++   +   ++ +
Sbjct: 3161 KHEMTISATDGGWVARTGSCSLTVNVIDVNDNSPVF--VPDEFFPTVMENAPSGTTVIHL 3218

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A + 
Sbjct: 3219 NATDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNV 3275

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V + + G N   P F    Y   VSE A   + V  +  S
Sbjct: 3276 PDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPRGTAVGEVFAS 3325



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K     S    + V + DINDN P     +  +QI+     
Sbjct: 2112 LDRE--EVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
               I+++ ATD+D G N ++ Y I  V      +FRID  +G I T  K +  E    Y+
Sbjct: 2170 GTDIIQVSATDSDEGTNGQVRYGI--VGGNTHQEFRIDSVTGAI-TVAKTLDRETTPAYT 2226

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G      +  V++ +   N   PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPE 2270



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATRRLDRE----HRSKYSLLVRADDGLQSS-DMRINITISDVNDHTPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L    
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYVVDEDDGDGV--FFLNPVTGVFNLTRALDYET 1908

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Q  Y +TV+A D GG+ +      +++   N   PVF  ++Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTVRAYFNIL-DVNDNPPVFSMSSYSTSLMENLPVGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     +  + ATD D+G N  + YSI   S     +F+I+ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYVTTVSATDPDMGPNGTVQYSI---SAGDRSRFQINAKSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV V+V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTVTVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            + +
Sbjct: 817 ATTM 820



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ-IQAGEARRQI 70
            VI RE+Q          G A +    + + + D+NDNAP  L  +  I  ++  +A   I
Sbjct: 853  VIDREEQSFYQLRVVASGGAVTGDTLVNITVKDLNDNAPHFLQAVESINAVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y + + A+
Sbjct: 913  YQAKAMDPDEGVNGRVLYSL---KQNPKNLFAINEQNGNISLLGALDVHAGSYQLEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +I+    V   N   PVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSIILTIYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY++   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDTLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYALISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ +   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDREHRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + DINDNAP     P + +I    + R+I+ + AT
Sbjct: 2636 KYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPAFEKDPFVSEILENLSPRKILTVSAT 2695

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +TV+++D G  
Sbjct: 2696 DKDSGPNGQLDYEI--VNGNKENSFTINHATGEIRSIRPLDREKMSHYELTVKSSDKGSP 2753

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V V + +   N  +P F Q  +   VSE + +  TV  +T S
Sbjct: 2754 SQSTSVRVIINILDENDNAPRFSQ-IFSAYVSENSPLGYTVTRVTTS 2799



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V A ++   +     ++T+N  D NDN P+        P+   ++ G    +
Sbjct: 2947 NINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFIKNKYFTPVTKNVKVG---TK 3003

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++  L KF++D  +G I     L++   + + ITV
Sbjct: 3004 LIKVTAMDDKDFGLNSEVEYFISNGNH--LRKFKLDNDTGWISIASPLVSDLNQNFFITV 3061

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V ++V    N  +P F Q+     + E  S+ + V  ++
Sbjct: 3062 TAKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHISATIPESHSVGAVVRAVS 3114



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 28/201 (13%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVSE 166
             A  QYS+TVQATD G  S    ++ I+++  V   N   PV     F   +   +V E
Sbjct: 313 FEARRQYSLTVQATDRGVPSLTGRAEAIIQLLDV---NDNDPVVKFRYFPATSRYASVDE 369

Query: 167 GASINSTVATITVSRLASGCA 187
            A + + VA +TV+   S  A
Sbjct: 370 NAQVGTVVALLTVTDADSPAA 390



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 74/167 (44%), Gaps = 33/167 (19%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDN-----APRLPMIP---PIQIQ 62
             D P P   RF   A+            +++ L D+NDN     +P+L  IP   PI   
Sbjct: 2021 HDSPQPPASRFTSTAQ------------VSIILLDVNDNPPMFLSPKLTYIPENTPIDTV 2068

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-- 120
                   + K +ATD D G N+ I Y++    N   +KF I    G +  TG+L   E  
Sbjct: 2069 -------VFKAQATDPDSGPNSYIEYTLL---NPLGNKFSIGTIDGEVHLTGELDREEVS 2118

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             YS+TV ATD G     +  EV V V   N  +PVF Q  Y V + E
Sbjct: 2119 NYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKE 2165



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIV--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFTVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF QN Y   + EG  I + V +I
Sbjct: 1628 VFTQNKYITILKEGEPIGTNVISI 1651



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 11/143 (7%)

Query: 45   DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+   S     
Sbjct: 2460 DVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDEDIGSNSELHYSL---SGRNSE 2513

Query: 100  KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            KF IDP  G I  TG L    + + +V   D G         V+V        P  +   
Sbjct: 2514 KFHIDPLRGAIMATGPLSGASEVTFSVHVKDGGSFPKTDATTVTVRFSNKADFPKVRAKE 2573

Query: 160  YDVNVSEGASINSTVATITVSRL 182
                  E   + + V TIT S L
Sbjct: 2574 QTFMFPENQPVGTLVTTITGSSL 2596



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   V + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2733 LDRE--KMSHYELTVKSSDKGSPSQSTSVRVIINILDENDNAPRFSQIFSAYVSENSPLG 2790

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA    S Y +++T L  F I+P +G I  +  L     ++Y I 
Sbjct: 2791 YTVTRVTTSDEDIGINA---ISRYSIADTSL-PFTINPNTGDIVISRPLNREDTDRYRIR 2846

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   + S V  ++ +
Sbjct: 2847 VSAHDSGWTVSTDV--TIFVTDINDNTPRFSRPSYYLDCPELTEVGSKVTQVSAT 2899



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  + LT+ ++D+NDN P    I   ++   E+     +  K+
Sbjct: 960  GSYQLEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQI-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       E+Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTITD-GNTG-DAFGIFPDGQLYIKSELDRELQERYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P              +PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEVPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T+  G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V V   N   PVF Q   Y V+V E A
Sbjct: 564 SYAQLVVTVLDVNDEKPVFSQPEGYTVSVVENA 596



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+     ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQE--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ Y+         ++ V+   T  HKF    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYAFEVTQPDFELHAVTGEITNTHKFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   VSE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATVSETAT 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDMDEG 1240



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)

Query: 14   PNPGKFRFQVIAREKQGTAASVPVSLT-VNLNDINDNAPRLPMIPPIQIQAGEARRQIVK 72
            P+  K  F  +  + +GT   VP  ++ +   ++++ APR           G A   + +
Sbjct: 3276 PDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPR-----------GTA---VGE 3321

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + A+D D+G + E+ Y I+   N+    F+I   +G I  +G L     E+ S+ V A +
Sbjct: 3322 VFASDRDMGADGEVHYLIF--GNSRKKGFQIHKMTGQIYVSGLLDREKEERVSLKVLAKN 3379

Query: 131  TGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G      I EV+V   V   N   PVF  NTY V +SEG  I + V  ++
Sbjct: 3380 FGSIRGADIDEVTVNITVLDAND-PPVFSLNTYRVQISEGVPIGTHVTFVS 3429



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 15/169 (8%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDH 171

Query: 88  YSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQ 137
            S   V      +FR+D     SG      + + G L      QY + V+  D G    +
Sbjct: 172 RSYRIVRGNEAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRR 231

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L++++ D NDN P  P    + +   E  R    +  + ATD+D GVNA++ Y+I   
Sbjct: 1299 CTLSIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGS 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   + ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIMENVPLGTSVISVT 1443



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEAT 76
            ++  + A+++     S  +S+ +++ D NDN P  P   I    ++       ++ + A 
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIMENVPLGTSVISVTAH 1445

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D D  +N +++Y+I      G H F ID   G I T+ ++       + +TV+A D
Sbjct: 1446 DPDADINGQLSYAIIQQMPRGNH-FSIDEVKGTIYTSAEIDREFANLFELTVKAND 1500



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      V    N+ D+NDN P   M       ++       ++    TD 
Sbjct: 1912 YILTVRAEDGGGQFTTVRAYFNILDVNDNPPVFSMSSYSTSLMENLPVGSTVLVFNVTDA 1971

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            D GVN++++YSI   S   L +F +D + GV++T   L    Q  Y++ +Q  D+
Sbjct: 1972 DDGVNSQLSYSI--ASGDSLGQFAVD-KHGVLKTLKALDRESQSFYNLVIQVHDS 2023


>gi|431917281|gb|ELK16817.1| Cadherin-18 [Pteropus alecto]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIVNGDGIGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYIMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|426385074|ref|XP_004059058.1| PREDICTED: cadherin-18 [Gorilla gorilla gorilla]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|397494221|ref|XP_003817983.1| PREDICTED: cadherin-18 [Pan paniscus]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|363738904|ref|XP_003642092.1| PREDICTED: uncharacterized protein LOC100858872 [Gallus gallus]
          Length = 1229

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 15/125 (12%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAP----RLPMIP-PIQIQAGEARRQIVKIEATDNDLGV 82
           + GTA      + +++ D NDNAP     + M+  P  +  G    Q+   +ATD D G 
Sbjct: 796 RSGTA-----QIKIDVTDANDNAPVFAKEIYMVRVPENLPEGSLAFQV---KATDGDEGT 847

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIV 140
           NAEITYS   ++++    F +DP++G ++ TG L   +   Y +TV+  D GG S+ T V
Sbjct: 848 NAEITYSFSDIASSARQLFSLDPKTGDVKITGPLDYEDVKYYEVTVEGKDGGGLSAHTKV 907

Query: 141 EVSVV 145
            + V+
Sbjct: 908 HIGVI 912



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 19/158 (12%)

Query: 39  LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
           + V + D NDNAP         R+P   P+          ++++ ATD D G N ++ YS
Sbjct: 226 IRVAVLDANDNAPAFSQAVYTVRVPEDVPVG-------STLLRVTATDPDDGTNGDVKYS 278

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
           +  ++      F ++ ++G I     L    GE Y + VQA D GG S +  V +SV   
Sbjct: 279 LNKITQKASKIFHLESKTGAIRLVRNLDYEEGESYELLVQAQDGGGLSDKAKVSISVT-D 337

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P     +    +SE A+  + VA + V    SG
Sbjct: 338 VNDNAPEISVRSALSEISEDAAPGTVVALLHVQDRDSG 375



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 25/179 (13%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIVK-IEATDN 78
            ++V    K G   S    + + + D+NDNAP L ++P +  +        +V  I   D 
Sbjct: 889  YEVTVEGKDGGGLSAHTKVHIGVIDVNDNAPSLTLLPIVNPVPEDSVPSTVVAVINVRDR 948

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATD 130
            D GVN E+T  +      G   F+++  S   E+T KL+            Y+IT+ ATD
Sbjct: 949  DSGVNGEVTCKL-----NGDLPFKLEASS---ESTYKLVIENSLDREEVSAYNITITATD 1000

Query: 131  TGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G  +    +  ++EVS V   N  +PVF++  Y   V E  +    V  ++     +G
Sbjct: 1001 RGSPALSSRADLVLEVSDV---NDNAPVFEEAAYSAYVPENNAAGELVLRVSARDADAG 1056



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 21/157 (13%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSIYHVS 94
           ++ V + DINDNAP       I+++  E      +    EA D D+GVN+  +Y++    
Sbjct: 116 AIEVEITDINDNAPSF-REAEIELKMSEVTAPGSRFPLPEAHDPDVGVNSLQSYAL---- 170

Query: 95  NTGLHKFRIDPRSGVI-ETTGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVS 143
            +G   F +  ++G   E   +L+  +         + + ++A+D G   ++    + V+
Sbjct: 171 -SGDEHFSLSVQAGADGEKRPELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVA 229

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           V+   N  +P F Q  Y V V E   + ST+  +T +
Sbjct: 230 VLDA-NDNAPAFSQAVYTVRVPEDVPVGSTLLRVTAT 265


>gi|426367248|ref|XP_004050645.1| PREDICTED: protocadherin-16 [Gorilla gorilla gorilla]
          Length = 3298

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 422 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 479

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 480 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 533

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 534 ASLDYELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 593

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 594 GTCFLQVTATDADSG 608



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2344 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2398

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2399 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2454

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F  + Y V V+E     ST+ T+
Sbjct: 2455 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLSHYRVAVTEDLPPGSTLLTL 2504



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1821 FQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1879

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L       Y+ +V A D   
Sbjct: 1880 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDRERCPSYTFSVSAVDGAA 1936

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1937 AGPLSTTVSVTITVRDVNDHAPTF 1960



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2139 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2197

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2198 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2255

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2256 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2310



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1635 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDVGANGQVTYG-- 1687

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1688 GVSS---ESFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDE 1744

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1745 NDHAPTFGSAHLSLEVPEG 1763



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 207 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 263

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D GVN  +TY I    + G   F ID  +G+++    L
Sbjct: 264 VSESLAPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 320

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 321 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 380

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 381 PGQLVARISVS 391



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 882  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 934

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 935  AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 994

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 995  GLAPRFNSPTYRVDLPSGTNAGTQVLQV 1022



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1124 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1182

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
              D G   +S+   V V+V+   N  SP F Q
Sbjct: 1183 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1213



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 106 VLDREQRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 152

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIET------- 112
               A      +E A D D G    +    Y +S  G  + FR++ R G   T       
Sbjct: 153 PEHTAFGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGTPVPELVV 209

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 210 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 268

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 269 APGSPVLQVFASDADAGV 286



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1536 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1585

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L      ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1586 SGGDGHFRLHSSTGALSVVRPLDRERRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1644

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E +   +++ T+
Sbjct: 1645 EAPTFQQQEYSVLLRENSPPGTSLLTL 1671



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2672 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2728

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2729 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2782

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2783 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2826



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1735 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1794

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1795 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHA 1852

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1853 PAFPVPAYSVEVPE 1866


>gi|380786417|gb|AFE65084.1| cadherin-18 isoform 1 preproprotein [Macaca mulatta]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYIMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|73490260|dbj|BAB61903.2| KIAA1773 protein [Homo sapiens]
          Length = 3434

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 558 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 615

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 616 EPLPEVALPGS----FVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 669

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 670 ASLDYELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 729

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 730 GTCFLQVTATDADSG 744



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2480 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2534

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2535 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2590

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F  + Y V V+E     ST+ T+
Sbjct: 2591 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLSHYRVAVTEDLPPGSTLLTL 2640



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1957 FQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 2015

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 2016 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAA 2072

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 2073 AGPLSTTVSVTITVRDVNDHAPTF 2096



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2275 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2333

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2334 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2391

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2392 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2446



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD D+G N ++TY   
Sbjct: 1771 LTVSVADVNDEAPTF-----QQQEYSVLLRENNPPGTSLLTLRATDPDVGANGQVTYG-- 1823

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1824 GVSS---ESFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDE 1880

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1881 NDHAPTFGSAHLSLEVPEG 1899



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 343 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 399

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D GVN  +TY I    + G   F ID  +G+++    L
Sbjct: 400 VSESLAPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 456

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 457 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 516

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 517 PGQLVARISVS 527



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 1018 VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 1070

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 1071 AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 1130

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + V  +
Sbjct: 1131 GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1158



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1260 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1318

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
              D G   +S+   V V+V+   N  SP F Q
Sbjct: 1319 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1349



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 31/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 242 VLDREQRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 288

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIET------- 112
               A      +E A D D G    +    Y +S  G  + FR++ R G   T       
Sbjct: 289 PEHTAFGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGTPVPELVV 345

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 346 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 404

Query: 169 SINSTVATITVSRLASG 185
           +  S V  +  S   +G
Sbjct: 405 APGSPVLQVFASDADAG 421



 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1672 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1721

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L   +  ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1722 SGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1780

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E     +++ T+
Sbjct: 1781 EAPTFQQQEYSVLLRENNPPGTSLLTL 1807



 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2808 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSVAENQPPGTLVTTL 2864

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2865 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2918

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2919 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2962



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1871 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1930

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1931 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHA 1988

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1989 PAFPVPAYSVEVPE 2002


>gi|4826671|ref|NP_004925.1| cadherin-18 isoform 1 preproprotein [Homo sapiens]
 gi|3023435|sp|Q13634.1|CAD18_HUMAN RecName: Full=Cadherin-18; AltName: Full=Cadherin-14; Flags:
           Precursor
 gi|1389853|gb|AAB02933.1| cadherin-14 [Homo sapiens]
 gi|119589257|gb|EAW68851.1| cadherin 18, type 2 [Homo sapiens]
 gi|158260117|dbj|BAF82236.1| unnamed protein product [Homo sapiens]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|242021157|ref|XP_002431012.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
 gi|212516241|gb|EEB18274.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
          Length = 996

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 290 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 347

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++ATD+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 348 VDEDIALGTSILKVKATDSDSGFNAEIEYLVSD------DHFSVDA-NGIISNNKQLDAD 400

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  S      V +     N   P F Q  Y  NV E A  N+ V 
Sbjct: 401 NNNAYYEFVVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 460

Query: 176 TITVS 180
           T+  S
Sbjct: 461 TVVAS 465



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 24/189 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAA-------SVPVSLTVNLNDINDNAPRLP----MIP 57
           LDRD     K+   V A +     A       +    + V + D+NDN P         P
Sbjct: 504 LDRD-----KYELNVTAMDDGACCANGGSTIHTSTAVVVVFITDVNDNKPVFKDCSTYYP 558

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            ++ +       ++K+ A D D GVN ++ YSI    N    KF +D  +G + +T K+ 
Sbjct: 559 KVE-EGAPNGSPVIKVHAIDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEV-STNKVF 616

Query: 118 -----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI 
Sbjct: 617 DREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIG 676

Query: 172 STVATITVS 180
           + +  ++ S
Sbjct: 677 TNILRVSAS 685



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 13/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAP---RLPMIPPIQIQAG 64
            DR+  + GKF    +    QG  +   V S TV + D+NDN P   R   +  ++ Q  
Sbjct: 616 FDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVK-QDA 673

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI--AGEQ 121
                I+++ A+D D   N  I Y++    N   +  F I P SG I     L   + ++
Sbjct: 674 SIGTNILRVSASDEDADNNGAIVYTLSAPFNPLDIEYFEIQPESGWITLNHPLDYESIKE 733

Query: 122 YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           Y++T++  + G +  +S+  V + ++   N   P+F +   +  V EG  I + V  +
Sbjct: 734 YNLTIRVENNGAQQLASEATVYI-MLEDVNDEIPLFTEREQET-VLEGEPIGTKVTQV 789


>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
          Length = 4588

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 85/188 (45%), Gaps = 9/188 (4%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            L+ + E LD +  +  +    V+ R++          + VN++D ND+AP          
Sbjct: 1513 LLYTSEKLDHEAIH--QHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGR 1570

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              ++      ++++ A D D G NAE+ YSI    N G H F IDP  G I+T  +L   
Sbjct: 1571 VYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNIG-HSFTIDPILGSIKTAKELDRS 1628

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             Q  Y + V+ATD G      I  V + V   +  SP F    Y V +SE  S+ S V  
Sbjct: 1629 NQVEYDLMVKATDKGSPPMSEITSVHIFVTIADNASPKFTSKEYSVEISETISVGSFVGM 1688

Query: 177  ITVSRLAS 184
            +T    +S
Sbjct: 1689 VTAHSQSS 1696



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + E LDR+ P       +++A++  G  A    ++ V L D NDNAP+       ++ 
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFC--TINVILTDDNDNAPQFRATK-YEVN 2604

Query: 63   AGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA- 118
             G +  +   ++K+ A+D D G NA++TY+I   S +      I+  SG+I T   LI  
Sbjct: 2605 IGSSAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGIITTKESLIGL 2664

Query: 119  -GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              E ++  V+A D G    +++V V V +  P  + P F +  Y   V E   I + +  
Sbjct: 2665 ENEFFTFFVRAVDNGSPPKESVVPVYVKILPPEMQLPKFTEPFYTYTVPEDMPIGTEIDL 2724

Query: 177  I 177
            I
Sbjct: 2725 I 2725



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
            +++++ A   D+  NAEITYSI  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 3248 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +ATD G  S   +  V+V V   N  +PVF Q+TY   +SE A +  +V T+
Sbjct: 3306 EATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVISEDAVLEQSVITV 3357



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 21/174 (12%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPICEKTLYSD 3030

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +     + I+++ ATD D+  NAEITY+++     G  KF+++P +G ++T  
Sbjct: 3031 TIP----EDAFPGKLILQVSATDADIRSNAEITYTLF---GPGAEKFKLNPDTGELKTLV 3083

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L   EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 3084 PLDREEQAVYNLLVKATDGGGRFCQAHI-VLTLEDVNDNAPEFSADPYTITVFE 3136



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+  +   +   V A ++     S  + + + + D+NDNAP+   P+  P 
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPE 1147

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +V+I+A D D   N ++TY I   +  G   F I P++G+I TT + +  
Sbjct: 1148 VMENSPKDVSVVQIQAFDPDSSSNDKLTYKITSGNPQGF--FAIHPKTGLITTTSRKLDR 1205

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G     TI  V V +   N   P F Q  Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 41   VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V + D NDN P         RLP     + +    R  + ++ ATD D G NAEI+YSI 
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPERERNARREPLYRVIATDKDEGPNAEISYSIE 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              +  G  KF I+P++GV+ +     AGE   ++++A D G   KSS T + +  +  P 
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPT 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F+++ +   V E   +   +  ++V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVLSV 1382



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPP-IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYH 92
            V L V+L D+NDN P+   IPP  +++  E   +   I+ +EA D DLG ++++ YS+  
Sbjct: 911  VLLKVSLEDVNDNPPKF--IPPNYRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLL- 967

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP- 146
              + G   F +D  SG +    +L   ++  Y++TV+A D G     SS   VEV V+  
Sbjct: 968  --DHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGKPISLSSTCYVEVEVIDV 1025

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   PVF        V E   I S+V  ++     +G
Sbjct: 1026 NENLHPPVFSSFVEKGVVKEDVPIGSSVMAVSAHDEDTG 1064



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            ENLD +  +  ++   V A +    + S   ++ VN+ DINDN P         + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVISEDA 3348

Query: 67   --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
               + ++ + A D D   N+ I YSI   +  G   F IDP  G ++ T KL+  E    
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIIDGNQGG--PFTIDPARGEVKVT-KLLDRETISG 3405

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y++TVQA+D G         V++ V   N  +PVF +  Y + + E   +  +V  + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKRIYSIIIQENKPVGFSVLQLVVT 3465



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 21/160 (13%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---------QIVKIEATDNDLG 81
            T A   V + + + DINDN       PP+ +Q   A            +V+++ATD+D  
Sbjct: 2261 TGAHAEVFVDIIVEDINDN-------PPVFVQQSYAATLSEASVIGTSVVQVKATDSDSE 2313

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQ 137
             N  I+Y ++   +     F ID  +G+I     L     +Q+ I V+A D+G    SS 
Sbjct: 2314 PNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVRAVDSGMPPLSSD 2373

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             IV V V    N   P+F Q  Y+  +SE A+    V  +
Sbjct: 2374 VIVTVDVT-DLNDNPPLFDQQIYEAKISEHATHGHFVTCV 2412



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI--QIQAGEARRQIVKIEATDN 78
            + ++ +   G        + + L D+NDNAP     P      +  E    + +++ATD 
Sbjct: 3093 YNLLVKATDGGGRFCQAHIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GK 134
            D G+N +I+YS+    N+   +F I+  SG+I+    L    Q  Y++T++A D G   +
Sbjct: 3153 DAGLNRKISYSLI---NSADGQFSINELSGIIQLEKPLDREVQAVYTLTLKAVDHGLPRR 3209

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V  V   N   PVF+   Y   VSE   I + V  +
Sbjct: 3210 LTGVGTVVVSVLDINDNPPVFEYREYGATVSEDILIGTEVLQV 3252



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 19   FRFQVIAR---EKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKI 73
            ++F ++AR   +     ASV VS+ V   D NDN+P +   P     ++      ++++I
Sbjct: 2774 YQFSILARCTHDDSEVVASVDVSIQVK--DANDNSPVVESNPYEAFIVENLPGGSRVIQI 2831

Query: 74   EATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             A+D D G N ++ YS+    +   L  F I+  +G I T  +L   ++  Y I V A+D
Sbjct: 2832 RASDLDSGTNGQVMYSLDQSQSVEVLESFAINMETGWITTLKELDHEKRDNYQIKVVASD 2891

Query: 131  TGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             G K   SS  IV+V+V    N   P F    Y   VSE
Sbjct: 2892 HGEKVQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSE 2929



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 30/143 (20%)

Query: 36   PVSLT------VNLNDINDNAPRLPMIPPIQ---IQAGEARRQI------VKIEATDNDL 80
            P+SL+      V + D+N+N     + PP+    ++ G  +  +      + + A D D 
Sbjct: 1009 PISLSSTCYVEVEVIDVNEN-----LHPPVFSSFVEKGVVKEDVPIGSSVMAVSAHDEDT 1063

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            G + EI YSI   S  G+  F+ID  +GVIET+ +L   +   Y +TV ATD G     +
Sbjct: 1064 GRDGEIRYSIRDGSGVGV--FKIDEETGVIETSDRLDRESTSHYWLTVYATDQGVVPLSS 1121

Query: 139  IVEVSVV------PGPNTRSPVF 155
             +EV +         P T  PV+
Sbjct: 1122 FIEVYIEVEDVNDNAPQTSEPVY 1144



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V +TV++ D+NDN P     I   +I         V  ++A D D     ++ YSI  +S
Sbjct: 2374 VIVTVDVTDLNDNPPLFDQQIYEAKISEHATHGHFVTCVKAYDADSSDIDKLEYSI--LS 2431

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F ID  +G+I  +   +      YS+    +D   +SS   V V+V+ G N  S
Sbjct: 2432 GNDHKNFVIDSETGIITLSNLRRHTLKPFYSLNTSVSDGVFRSSAQ-VHVTVIGG-NLHS 2489

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF QN Y+V ++E A +++ V  +  +   SG
Sbjct: 2490 PVFLQNEYEVELAENAPVHTLVIEVKATDGDSG 2522



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDN P   +     ++  E +    +I+++EATD DLG N  +TYSI     
Sbjct: 808 LDIRVLDANDNPPEF-LQERYFVEVSEDKEINSEIIQVEATDKDLGPNGRVTYSIL---- 862

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
           T   KF ID  +GV++    L    Q  + + ++A D   +  Q +  V +   +   N 
Sbjct: 863 TDTDKFSIDSMTGVVKIVDPLDRELQHVHYLKIEARDQASEEPQLLSTVLLKVSLEDVND 922

Query: 151 RSPVFQQNTYDVNVSE 166
             P F    Y V V E
Sbjct: 923 NPPKFIPPNYRVKVRE 938



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 44  NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
           + +N +AP+     P  I+  E       I+ + ATD D G N ++ Y+I   +      
Sbjct: 707 HSVNAHAPQFRNTLPTGIEVKENHPVGSNIISMNATDLDTGFNGKLVYAISGGNEDSC-- 764

Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
           F ID  +G+++    L     ++Y++ +  +D G   K++  ++++ V+   N   P F 
Sbjct: 765 FIIDMETGMLKILSPLDRETTDKYTLNISVSDLGIPQKAAWHLLDIRVLDA-NDNPPEFL 823

Query: 157 QNTYDVNVSEGASINSTV 174
           Q  Y V VSE   INS +
Sbjct: 824 QERYFVEVSEDKEINSEI 841



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
            +++++ATD D G+  +ITY I  V++    +F  + R G I T  KL     A +  S+ 
Sbjct: 2511 VIEVKATDGDSGIYGDITYHI--VNDFAKDRFYTNER-GQIFTLEKLDRETPAEKVISVR 2567

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            + A D GGK +   + V ++   N  +P F+   Y+VN+   A   ++V  +  S    G
Sbjct: 2568 LMAKDAGGKVAFCTINV-ILTDDNDNAPQFRATKYEVNIGSSAPKGTSVIKVLASDADEG 2626



 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SG I  T K +  E    Y++ +Q T+  G S+ T V V +    N  SPVF Q
Sbjct: 1710 FDINPHSGSI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDNSPVFMQ 1767

Query: 158  NTYDVNVSEGASINSTVAT 176
              Y   +SE ASINS V T
Sbjct: 1768 AEYTGLISESASINSVVLT 1786



 Score = 42.7 bits (99), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 12/117 (10%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
            +I++I A D D     E    IY + ++     L KFR+DP +G++ T+ KL   A  Q+
Sbjct: 1474 EILQISALDKD-----EKNKLIYTLQSSIDPLSLKKFRLDPATGLLYTSEKLDHEAIHQH 1528

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +TV   D      +    + V V   N  +P F  ++Y+  V E A++ S V  +T
Sbjct: 1529 VLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVT 1585



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
            +LD +  +   F  QV         A    ++T+++ DIND  P     +     +    
Sbjct: 1834 SLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLYEASLLLPTY 1893

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
               +++ + ATD D    +++ YSI    N G  KF +D R+G I          +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLMYSITE-GNIG-EKFSVDYRTGTITVQNTTQLRSRYELT 1951

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            ++A+D G  +S T V+++V     ++   F Q+ Y   V E ++   T+A IT
Sbjct: 1952 MRASD-GRFASFTSVKINVKESKESQLK-FTQDFYSAVVKENSTEARTLAVIT 2002



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
           R  I ++ ATD D+G N E  YS    ++     F I P SG +  TG+L   E   Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGAVVLTGRLDYAETMLYEM 220

Query: 125 TVQATDTGGK 134
            + A D G K
Sbjct: 221 EILAVDRGMK 230



 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 25/187 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPI 59
            VVS   +  D      F   V   +++  +A   V + V + D NDNAP    LP    +
Sbjct: 2031 VVSTTGVPFDREQQEAFDVVVEVTQERKPSAVAHVVVKVIIEDQNDNAPVFVNLPYYAVV 2090

Query: 60   QIQ--AGEARRQIVKIEATDNDLGVNAEITYSI--YHVSNTGLHKFRIDPRSGVIETTGK 115
            ++    G   R +    A D D G N E+ Y +  +H        F+I   SG I    +
Sbjct: 2091 KVDTVVGHVIRYVT---AVDRDSGRNGEVHYYLKEHH------EHFQIG-SSGEISLKKQ 2140

Query: 116  L---IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
                   ++Y +TV A D G    S++ IV ++V+   N   PVF++  Y   + E   I
Sbjct: 2141 FEPDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVM---NKAMPVFEKPFYSAEIPENIQI 2197

Query: 171  NSTVATI 177
            +S V  I
Sbjct: 2198 HSPVVHI 2204


>gi|126321116|ref|XP_001374843.1| PREDICTED: cadherin-9 [Monodelphis domestica]
          Length = 789

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 20/188 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           + + + LDR+  +    R + I R K G          + ++DINDN P+         +
Sbjct: 110 IHAAKKLDREEKSLYVLRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 168

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G +  Q++  +A D + G +A+I YSI      G   F +DP SG+I+T    
Sbjct: 169 PEMS-GVGTSVIQVLATDADDANYGNSAKIVYSILQ----GQPYFSVDPESGIIKTALPD 223

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           ++    EQY + +QA D GG+    S  T V +++    N   P F Q+TY  + SE  S
Sbjct: 224 MSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFSSSESVS 282

Query: 170 INSTVATI 177
           + + +  I
Sbjct: 283 LGTPLGRI 290



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 37/185 (20%)

Query: 20  RFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARRQ---IVK 72
           ++QV+  A++  G    +  + TVN  L D+N+N PR P     Q  + E+      + +
Sbjct: 231 QYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFSSSESVSLGTPLGR 289

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ---YSIT 125
           I+A D D+G NAE+ YS+  V   G + F I    D + G+I T  K +  E+   Y++ 
Sbjct: 290 IKANDPDVGENAEMEYSL--VEGDGSNMFDIITDKDTQEGII-TVKKQLDFEKKMLYTLR 346

Query: 126 VQATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTY----DVNVSEGASI 170
           ++A++T         G      +V++SV  V  P    P+F +  Y    D +V EG+ I
Sbjct: 347 IEASNTHPDPRFQHLGPFKDTAVVKISVEDVDEP----PIFSKPFYLIEVDEDVKEGSII 402

Query: 171 NSTVA 175
              +A
Sbjct: 403 GQVIA 407


>gi|114600921|ref|XP_526963.2| PREDICTED: cadherin-18 isoform 3 [Pan troglodytes]
 gi|332821710|ref|XP_003310817.1| PREDICTED: cadherin-18 isoform 1 [Pan troglodytes]
 gi|410331517|gb|JAA34705.1| cadherin 18, type 2 [Pan troglodytes]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|73953950|ref|XP_546374.2| PREDICTED: cadherin-18 isoform 1 [Canis lupus familiaris]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 27/191 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
             Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLN 336

Query: 117 -IAGEQYSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
               + Y++T++  +T         G     T++++ V  G     P+F   +Y + V E
Sbjct: 337 YEKKKSYTLTIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEVYE 394

Query: 167 GASINSTVATI 177
            A I + V T+
Sbjct: 395 NAKIGTVVGTV 405


>gi|402871213|ref|XP_003899572.1| PREDICTED: cadherin-18 [Papio anubis]
          Length = 734

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 54  IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 112

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 113 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 168

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 169 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 227

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 228 GSAVGKIKANDADTG 242



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 166 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 221

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 222 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 278

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 279 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 336

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 337 YENAKIGTVVGTV 349


>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
          Length = 5152

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E      Q++++
Sbjct: 1346 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATVSETATNLTQVLRV 1403

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1404 SASDMDEGSNGLIHYSI--LKGNEERQFAIDRFSGQVTLIGKLDYEATPAYSLLIQAVDS 1461

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +S+ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1462 GAISLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1516



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   SLTVN+ D+NDN+P    +P    P  ++   +   ++ +
Sbjct: 3332 KHEMTISATDGGWVARTGSCSLTVNVIDVNDNSPVF--VPDEFFPTVMENAPSGTTVIHL 3389

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A + 
Sbjct: 3390 NATDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNV 3446

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V + + G N   P F    Y   VSE A   + V  +  S
Sbjct: 3447 PDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPRGTAVGEVFAS 3496



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K     S    + V + DINDN P     +  +QI+     
Sbjct: 2283 LDRE--EVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKENTLT 2340

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
               I+++ ATD+D G N ++ Y I  V      +FRID  +G I T  K +  E    Y+
Sbjct: 2341 GTDIIQVSATDSDEGTNGQVRYGI--VGGNTHQEFRIDSVTGAI-TVAKTLDRETTPAYT 2397

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G      +  V++ +   N   PVF+ + Y VNV E
Sbjct: 2398 LTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPE 2441



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1967 LIATRRLDRE----HRSKYSLLVRADDGLQSS-DMRINITISDVNDHTPKFSRPVYSFDI 2021

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L    
Sbjct: 2022 PEDTTPGSLVAAILATDDDSGVNGEITYVVDEDDGDGV--FFLNPVTGVFNLTRALDYET 2079

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Q  Y +TV+A D GG+ +      +++   N   PVF  ++Y  ++ E   + STV    
Sbjct: 2080 QQYYILTVRAEDGGGQFTTVRAYFNIL-DVNDNPPVFSMSSYSTSLMENLPVGSTVLVFN 2138

Query: 179  VSRLASG 185
            V+    G
Sbjct: 2139 VTDADDG 2145



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 817 SLDRE--EQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSP---VFYPVQYFAHIQE 871

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     +  + ATD D+G N  + YSI   S     +F+I+ +SGVI T   L   E+ 
Sbjct: 872 NEPGGSYVTTVSATDPDMGPNGTVQYSI---SAGDRSRFQINAKSGVISTRMALDREEKT 928

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV V+V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 929 AYQLQIVATDGGNLQSPNQAIVTVTVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 987

Query: 179 VSRL 182
            + +
Sbjct: 988 ATTM 991



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ-IQAGEARRQI 70
            VI RE+Q          G A +    + + + D+NDNAP  L  +  I  ++  +A   I
Sbjct: 1024 VIDREEQSFYQLRVVASGGAVTGDTLVNITVKDLNDNAPHFLQAVESINAVENWQAGHSI 1083

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y + + A+
Sbjct: 1084 YQAKAMDPDEGVNGRVLYSL---KQNPKNLFAINEQNGNISLLGALDVHAGSYQLEILAS 1140

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +I+    V   N   PVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 1141 DMGVPQLSSSIILTIYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQASDKDSG 1197



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY++   ++  
Sbjct: 1899 ITLQDINDNPPVFPTDTLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYALISGAD-- 1955

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ +   N  +P F
Sbjct: 1956 -DSFRIDPESGDLIATRRLDREHRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHTPKF 2012

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 2013 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 2042



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + DINDNAP     P + +I    + R+I+ + AT
Sbjct: 2807 KYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPAFEKDPFVSEILENLSPRKILTVSAT 2866

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +TV+++D G  
Sbjct: 2867 DKDSGPNGQLDYEI--VNGNKENSFTINHATGEIRSIRPLDREKMSHYELTVKSSDKGSP 2924

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V V + +   N  +P F Q  +   VSE + +  TV  +T S
Sbjct: 2925 SQSTSVRVIINILDENDNAPRFSQ-IFSAYVSENSPLGYTVTRVTTS 2970



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V A ++   +     ++T+N  D NDN P+        P+   ++ G    +
Sbjct: 3118 NINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFIKNKYFTPVTKNVKVGT---K 3174

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++  L KF++D  +G I     L++   + + ITV
Sbjct: 3175 LIKVTAMDDKDFGLNSEVEYFISNGNH--LRKFKLDNDTGWISIASPLVSDLNQNFFITV 3232

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V ++V    N  +P F Q+     + E  S+ + V  ++
Sbjct: 3233 TAKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHISATIPESHSVGAVVRAVS 3285



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 28/201 (13%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 373 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 427

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 428 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 483

Query: 118 --AGEQYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVSE 166
             A  QYS+TVQATD G  S    ++ I+++  V   N   PV     F   +   +V E
Sbjct: 484 FEARRQYSLTVQATDRGVPSLTGRAEAIIQLLDV---NDNDPVVKFRYFPATSRYASVDE 540

Query: 167 GASINSTVATITVSRLASGCA 187
            A + + VA +TV+   S  A
Sbjct: 541 NAQVGTVVALLTVTDADSPAA 561



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 74/167 (44%), Gaps = 33/167 (19%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDN-----APRLPMIP---PIQIQ 62
             D P P   RF   A+            +++ L D+NDN     +P+L  IP   PI   
Sbjct: 2192 HDSPQPPASRFTSTAQ------------VSIILLDVNDNPPMFLSPKLTYIPENTPIDTV 2239

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-- 120
                   + K +ATD D G N+ I Y++    N   +KF I    G +  TG+L   E  
Sbjct: 2240 -------VFKAQATDPDSGPNSYIEYTLL---NPLGNKFSIGTIDGEVHLTGELDREEVS 2289

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
             YS+TV ATD G     +  EV V V   N  +PVF Q  Y V + E
Sbjct: 2290 NYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKE 2336



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1686 VTILVTDLNDN---VPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIV--- 1739

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1740 NGDTDTFTVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1798

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF QN Y   + EG  I + V +I
Sbjct: 1799 VFTQNKYITILKEGEPIGTNVISI 1822



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 11/143 (7%)

Query: 45   DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+   S     
Sbjct: 2631 DVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDEDIGSNSELHYSL---SGRNSE 2684

Query: 100  KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            KF IDP  G I  TG L    + + +V   D G         V+V        P  +   
Sbjct: 2685 KFHIDPLRGAIMATGPLSGASEVTFSVHVKDGGSFPKTDATTVTVRFSNKADFPKVRAKE 2744

Query: 160  YDVNVSEGASINSTVATITVSRL 182
                  E   + + V TIT S L
Sbjct: 2745 QTFMFPENQPVGTLVTTITGSSL 2767



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
            LDR+      +   V + +K   + S  V + +N+ D NDNAPR   I    +       
Sbjct: 2904 LDRE--KMSHYELTVKSSDKGSPSQSTSVRVIINILDENDNAPRFSQIFSAYVSENSPLG 2961

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA    S Y +++T L  F I+P +G I  +  L     ++Y I 
Sbjct: 2962 YTVTRVTTSDEDIGINA---ISRYSIADTSL-PFTINPNTGDIVISRPLNREDTDRYRIR 3017

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   + S V  ++ +
Sbjct: 3018 VSAHDSGWTVSTDV--TIFVTDINDNTPRFSRPSYYLDCPELTEVGSKVTQVSAT 3070



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P              +PP    +G        + ATD D G
Sbjct: 625 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEVPPGSYVSG--------VSATDGDSG 676

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T+  G L      Q  + + A D G     
Sbjct: 677 LNANLRYSI--VSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKV 734

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V V   N   PVF Q   Y V+V E A
Sbjct: 735 SYAQLVVTVLDVNDEKPVFSQPEGYTVSVVENA 767



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  + LT+ ++D+NDN P    I   ++   E+     +  K+
Sbjct: 1131 GSYQLEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQI-SYEVTLSESEPVNSRFFKV 1189

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       E+Y + V A+D  
Sbjct: 1190 QASDKDSGANGEIAYTITD-GNTG-DAFGIFPDGQLYIKSELDRELQERYVLLVVASDRA 1247

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1248 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1294



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+     ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1226 KSELDRELQE--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1283

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ Y+         ++ V+   T  HKF    R  ++  
Sbjct: 1284 QRAGSFVGKVSAVDKDFGPNGEVRYAFEVTQPDFELHAVTGEITNTHKFD---RESLMRR 1340

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   VSE A+
Sbjct: 1341 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATVSETAT 1395

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1396 NLTQVLRVSASDMDEG 1411



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)

Query: 14   PNPGKFRFQVIAREKQGTAASVPVSLT-VNLNDINDNAPRLPMIPPIQIQAGEARRQIVK 72
            P+  K  F  +  + +GT   VP  ++ +   ++++ APR           G A   + +
Sbjct: 3447 PDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPR-----------GTA---VGE 3492

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + A+D D+G + E+ Y I+   N+    F+I   +G I  +G L     E+ S+ V A +
Sbjct: 3493 VFASDRDMGADGEVHYLIF--GNSRKKGFQIHKMTGQIYVSGLLDREKEERVSLKVLAKN 3550

Query: 131  TGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G      I EV+V   V   N   PVF  NTY V +SEG  I + V  ++
Sbjct: 3551 FGSIRGADIDEVTVNITVLDAND-PPVFSLNTYRVQISEGVPIGTHVTFVS 3600



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 284 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDH 342

Query: 88  YSIYHVSNTGLHKFRIDPR---SGVIETTGKLIAG-------EQYSITVQATDTGGKSSQ 137
            S   V      +FR+D     SG       +  G        QY + V+  D G    +
Sbjct: 343 RSYRIVRGNEAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRR 402

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 403 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 451



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L++++ D NDN P  P    + +   E  R    +  + ATD+D GVNA++ Y+I   
Sbjct: 1470 CTLSIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGS 1528

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1529 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1586

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   + ++V ++T
Sbjct: 1587 NPPSFPPGDIFKSIMENVPLGTSVISVT 1614



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEAT 76
            ++  + A+++     S  +S+ +++ D NDN P  P   I    ++       ++ + A 
Sbjct: 1557 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIMENVPLGTSVISVTAH 1616

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D D  +N +++Y+I      G H F ID   G I T+ ++       + +TV+A D
Sbjct: 1617 DPDADINGQLSYAIIQQMPRGNH-FSIDEVKGTIYTSAEIDREFANLFELTVKAND 1671



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      V    N+ D+NDN P   M       ++       ++    TD 
Sbjct: 2083 YILTVRAEDGGGQFTTVRAYFNILDVNDNPPVFSMSSYSTSLMENLPVGSTVLVFNVTDA 2142

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            D GVN++++YSI   S   L +F +D + GV++T   L    Q  Y++ +Q  D+
Sbjct: 2143 DDGVNSQLSYSI--ASGDSLGQFAVD-KHGVLKTLKALDRESQSFYNLVIQVHDS 2194


>gi|262263227|tpg|DAA06604.1| TPA_inf: protocadherin gamma b3 isoform [Anolis carolinensis]
          Length = 939

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)

Query: 37  VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           +++ VN+ DINDNAP     M      +       +++++A+D+D G+NAEITY+   + 
Sbjct: 227 LNIRVNVTDINDNAPVFSQAMYKVSLKENVPIGMSVLQVKASDSDEGLNAEITYTFSDIQ 286

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
            T  HKF++DP++G I     +    Q  Y + +QA+D  G  +   VE+ V+
Sbjct: 287 ETAEHKFQLDPKNGTITLLESIDFENQKNYVMIIQASDGSGLVAHCNVEIDVL 339



 Score = 35.8 bits (81), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 13/182 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           + +++   LDR+  +  ++   + A +K     S   ++++ ++DINDN P       I 
Sbjct: 403 FKLLTDGQLDRE--SAPEYNITITATDKGTPPLSTYKTISIMISDINDNPPAFEKSSYIA 460

Query: 61  --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGK 115
             ++   A   I  ++A+D DL  NA+ITYS    S   L       I+  +G I +   
Sbjct: 461 YILENNPAGVFIFHVKASDPDLNRNAQITYSFLSTSIEDLPLSSYISINSETGTIYSQRS 520

Query: 116 LIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
               +  ++ I V+A D G     +   V+V +   N  SP   Q  Y     EG+S+  
Sbjct: 521 FDYEQLREFQIEVRAQDGGSPPLNSSATVTVCILDRNDNSP---QILYPSQAPEGSSVFE 577

Query: 173 TV 174
            V
Sbjct: 578 MV 579


>gi|410949759|ref|XP_003981585.1| PREDICTED: cadherin-18 isoform 1 [Felis catus]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 27/191 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKLI 117
             Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLN 336

Query: 118 AGEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             ++  Y++T++  +T         G     T++++ V  G     P+F   +Y + V E
Sbjct: 337 YEKKKSYTLTIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEVYE 394

Query: 167 GASINSTVATI 177
            A I + V T+
Sbjct: 395 NAKIGTVVGTV 405


>gi|301773674|ref|XP_002922256.1| PREDICTED: cadherin-18-like [Ailuropoda melanoleuca]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKP 334

Query: 116 LIAGEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L   ++  Y++T++  +T         G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLTIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|116003895|ref|NP_001070305.1| cadherin-18 precursor [Bos taurus]
 gi|122132281|sp|Q08DJ5.1|CAD18_BOVIN RecName: Full=Cadherin-18; Flags: Precursor
 gi|115304961|gb|AAI23715.1| Cadherin 18, type 2 [Bos taurus]
 gi|296475698|tpg|DAA17813.1| TPA: cadherin-18 precursor [Bos taurus]
          Length = 790

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 27/191 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
             Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKPLN 336

Query: 117 ----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                     I G    +  + +  G     T++++ V  G     P+F   +Y + V E
Sbjct: 337 YEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEVYE 394

Query: 167 GASINSTVATI 177
            A I + V T+
Sbjct: 395 NAKIGTVVGTV 405


>gi|109107523|ref|XP_001100797.1| PREDICTED: protocadherin-16-like [Macaca mulatta]
          Length = 3386

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIP 57
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP   R    P
Sbjct: 510 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQFYQP 567

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
               +       +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T   L 
Sbjct: 568 EPLPEVALPGSFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTAASLD 625

Query: 118 --AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  +TV ATD G     +   V+V +   N   P FQ+  Y+ ++ EG    +  
Sbjct: 626 YELEPQPQLTVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFYNASLPEGTQPGTCF 685

Query: 175 ATITVSRLASGC 186
             +T +   SG 
Sbjct: 686 LQVTATDADSGL 697



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            +++ Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2432 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2486

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  G +  G   S    + ++A
Sbjct: 2487 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2542

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2543 RDHGTPGRAARATVHVQLQ-DQNDHAPSFTLPHYRVAVTEDLPPGSTLLTL 2592



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + LTV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1909 FQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1967

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+  V A D   
Sbjct: 1968 HDPDAGANGRVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFAVSAVDGAA 2024

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 2025 AGPLSTTVSVTITVRDVNDHAPTF 2048



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2227 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2285

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2286 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RLVLMATDRGSP 2343

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2344 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2398



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD DLG N ++TY   
Sbjct: 1723 LTVSVADVNDEAPTF-----QQQEYSVLLRENSAPGTSLLTLRATDPDLGANGQVTYG-- 1775

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV+ T   L   EQ  I  TV A D G     T   + V V   
Sbjct: 1776 GVSSG---SFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHATIRVAVEDE 1832

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1833 NDHAPTFGSTHLSLEVPEG 1851



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 295 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQTLLDVTLLDINDHAPAFNQSRYHAV 351

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G+++    L
Sbjct: 352 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 408

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 409 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 468

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 469 PGQLVARISVS 479



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 970  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 1022

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 1023 AGGGGAFTVDPTTGHVRLMRHLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 1082

Query: 150  TRSPVFQQNTYDVNVSEG 167
              +P F   TY V++  G
Sbjct: 1083 GLAPQFDSPTYRVDLPSG 1100



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 194 VLDREQRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 240

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 241 PEHTAFGTCYPLEPARDADAG---HLGTQGYALSGDGAGETFRLETRPGPDGAPVPELVV 297

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +QT+++V+++   N  +P F Q+ Y   VSE  
Sbjct: 298 TGELDRENRSHYMLQLEAYDGGSPPRRAQTLLDVTLL-DINDHAPAFNQSRYHAVVSESL 356

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 357 APGSPVLQVFASDADAGA 374



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            + ++ ATD D G N  +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ
Sbjct: 1212 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSTYQLLVQ 1270

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
              D G  S  T   V V V   N  SP F Q
Sbjct: 1271 VQDGGSPSHSTTGTVHVAVLDLNDNSPTFLQ 1301



 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 23/153 (15%)

Query: 37   VSLTVNLNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            VS  V + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y
Sbjct: 1618 VSARVFVTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSY 1670

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSV 144
             +   ++ G   FR+   +G +     L   +  ++ + V A+D G   +S+  ++ VSV
Sbjct: 1671 RL---ASGGDGHFRLHSSTGALSVVQPLDREQRAEHVLIVVASDHGSPPRSATQVLTVSV 1727

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                N  +P FQQ  Y V + E ++  +++ T+
Sbjct: 1728 A-DVNDEAPTFQQQEYSVLLRENSAPGTSLLTL 1759



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2760 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2816

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G   ++ YS+        G   F ++       +TG+L A         E + 
Sbjct: 2817 HAIDGDAGAFGKLRYSLLEAGPGPEGREAFALN------SSTGELRARVAFDYEHTESFR 2870

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2871 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2914



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
             ++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1823 ATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1882

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++    V   N  +
Sbjct: 1883 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHA 1940

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1941 PAFPVPAYSVEVPE 1954


>gi|399152177|emb|CCI61371.1| flamingo membrane protein, partial [Platynereis dumerilii]
          Length = 633

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 20/176 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + +NLDR+        F + A +   T  +   +LT+ ++D+ND+AP        Q  
Sbjct: 323 VTTIDNLDRE--GITVHYFVIYATDAVNTRVNGQTALTIYVDDVNDHAPEFER----QSY 376

Query: 63  AGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           A E          I+ + A+D D G NA+I YSI + S      FRID R+G I T   L
Sbjct: 377 AREVSESVLVGATILTVRASDGDTGPNADIEYSIVNPSGDN-EVFRIDSRTGSIMTRATL 435

Query: 117 I--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                + Y++ +QA D G     + +  IVE++V    N   P F++++Y V+VSE
Sbjct: 436 DREKTQFYTLEIQAADKGPVTNRQKANAIVEITVT-DENDNYPQFEKSSYTVDVSE 490


>gi|426246694|ref|XP_004017127.1| PREDICTED: cadherin-18-like isoform 1 [Ovis aries]
          Length = 790

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 27/191 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
             Q G A   + KI+A D D G NA++TYSI      G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIIDGDGVGIFSISTDKETREGILSLKKPLN 336

Query: 117 ----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                     I G    +  + +  G     T++++ V  G     P+F   +Y + V E
Sbjct: 337 YEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEVYE 394

Query: 167 GASINSTVATI 177
            A I + V T+
Sbjct: 395 NAKIGTVVGTV 405


>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
 gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
          Length = 4980

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S  V + V+L D+NDN+P   +  PIQ    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMVRINVSLLDVNDNSP---VFYPIQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  I YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGLNGTIKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSV--MKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHIPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVLDYEA 1908

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +V+   N   P+F  ++Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTVRVYFNVL-DVNDNPPIFSLSSYSTSLMENLPLGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N  D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPSLLSETTVTINTVDSNDNAPQFLKTKYFTPVTKNVKVGT---K 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 3002 LIKVTAVDDRDFGLNSEVEYLISNENHFG--KFKLDNSTGWISVASLLISDLNQNFLITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F QN     + E   I + V T++
Sbjct: 3060 TARDKGNPPLSSQATVQI-IVTEENYHTPEFSQNHMSATIPESHGIGAIVRTVS 3112



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 12/151 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
             S+TVN+ D+NDN+P     P    P  ++   +   ++ + ATD D G NA I Y+I  
Sbjct: 3178 CSVTVNVIDVNDNSPVF--FPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTI-Q 3234

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             S++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V++ + G N
Sbjct: 3235 SSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTN 3292

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P F    Y   +SE A   + V  +  S
Sbjct: 3293 EYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V L D+ND  P         +   E      +++ + ATD DLG N  + +S+   + 
Sbjct: 568 LVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLRATDRDLGDNGTVRFSLQE-AE 626

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           T    FR+DP SG + T   L   EQ  YS+ V ATD G     ++V ++V +   N  S
Sbjct: 627 TDQRSFRLDPVSGKLSTIASLDREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDVNDNS 686

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PVF    Y  ++ E     S + T++ +
Sbjct: 687 PVFYPIQYFAHIQENEPGGSYITTVSAT 714



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 13/165 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      +   V+A +K   A S    + V + DINDN P   + P  +++  E   
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVF-VQPLYKVEINENTL 2168

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
                I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y
Sbjct: 2169 TGTDIIQVYAADGDEGTNGQVRYGI--VDGNANQEFRIDSVTGAI-TVAKPLDREKTPTY 2225

Query: 123  SITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            S+TVQA D G         VS+V    N   P F+ + Y VNV E
Sbjct: 2226 SLTVQAADRGSTPRTDTSTVSIVLLDINDFVPTFELSPYSVNVPE 2270



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N   P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHIPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R+I+ + A 
Sbjct: 2634 KYVIWIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    H F I+  +G I +   L   +  QY +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNKEHSFAINHATGEIRSIRPLDREKIPQYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +   V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVIINILDENDNAPRFSQ-IFSAYVPENSPLGYTVTRVTTS 2797



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 17/164 (10%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  +  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            D G  + S + +    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 970  DMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 1013



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEMTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   + + V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVGTLVTTITGSSL 2594



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 30/155 (19%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQ-------AGEA--RRQIVKIEATDNDLGV 82
           A S   SL + +NDIND+       PPI  Q       + EA     +  + ATD D G+
Sbjct: 454 ARSSVASLVIFVNDINDH-------PPIFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGL 506

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-------EQYSITVQATDTGGKS 135
           NA + YSI  VS  GL  F I   SG++ TTG  +AG        Q  + + A D G   
Sbjct: 507 NANLRYSI--VSGNGLGWFHISEHSGLV-TTG--VAGGLDRELASQIVLNISARDQGVHP 561

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
             +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 562 KFSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 9/166 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEAT 76
            ++   + + +K   + S  V + +N+ D NDNAPR   I    + +       + ++  +
Sbjct: 2738 QYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAYVPENSPLGYTVTRVTTS 2797

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK 134
            D D+G+NA   YSI   ++T L  F I+P +G I  +  L     ++Y I V A D+G  
Sbjct: 2798 DEDIGINAVSRYSI---TDTSL-PFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSGWT 2853

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2854 VSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELPEIGSKVTQVSAT 2897



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 20/193 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS--------IYHVSNTGLHKFRIDPRSGVIETTGK 115
             R    + K+ A D D G N E+ YS        + H  +  +   R   R  ++   G 
Sbjct: 1113 QRAGSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFVLHAISGEITNTRQFDRESLMRQRGT 1172

Query: 116  LIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  +
Sbjct: 1173 AV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANLT 1227

Query: 173  TVATITVSRLASG 185
             V  ++ S +  G
Sbjct: 1228 QVLRVSASDVDEG 1240



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 8/166 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V V+V+    N   P+F    Y     E     S V  +
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKV 1122



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG++ E+ Y I+   N
Sbjct: 3283 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGMDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P+F  N Y + +SEG    + V  ++
Sbjct: 3401 -PPIFSLNIYSIQISEGVPTGTHVTFVS 3427



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 7/117 (5%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQAT 129
            + A D D  +N  I+YSI   +  G+  F I+  +GV+ T  K +  E   ++ +T+ AT
Sbjct: 3111 VSARDRDAAMNGLISYSISSGNEEGI--FAINSSTGVL-TLAKALDYELCQKHEMTISAT 3167

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  S      V+V V   N  SPVF  + Y   V E A   +TV  +  +   SG
Sbjct: 3168 DGGWVSRTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIHLNATDADSG 3224



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T+ ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDEVKGTIFTSAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      V +  N+ D+NDN P   L       ++       ++    TD 
Sbjct: 1912 YILTVRAEDGGGQFTTVRVYFNVLDVNDNPPIFSLSSYSTSLMENLPLGSTVLVFNVTDA 1971

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            D G+N+++ YSI   S  GL +F +D ++GV++    L    Q  Y++ VQ  D
Sbjct: 1972 DDGINSQLAYSI--ASGDGLGQFTVD-KNGVLKVLKSLDRESQSFYNLVVQVHD 2022



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 5/166 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKIEA 75
            +   V A ++  T  +   ++++ L DIND  P   + P    +    G   R I+++ A
Sbjct: 2225 YSLTVQAADRGSTPRTDTSTVSIVLLDINDFVPTFELSPYSVNVPENLGTLPRTILQVVA 2284

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
             D+D G N++++Y ++  +              VI++  +    E + + + ATD+G  +
Sbjct: 2285 RDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQSLDRETK-EHFVLMITATDSGSPA 2343

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  ++V V   N   P F    Y   + E A   + V  +  S
Sbjct: 2344 LTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTDVLLVNAS 2389


>gi|26337531|dbj|BAC32451.1| unnamed protein product [Mus musculus]
          Length = 337

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 18/115 (15%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVI 110
             Q G A   + KI+A D D G NA++TYSI   +  G+  F I    D R G++
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSI--TNGDGIGVFSISTDKDTREGIL 329


>gi|392338637|ref|XP_003753587.1| PREDICTED: cadherin-18 [Rattus norvegicus]
 gi|392345462|ref|XP_003749271.1| PREDICTED: cadherin-18 [Rattus norvegicus]
          Length = 790

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 35/195 (17%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETT 113
           P   Q G A   + KI+A D D G NA++TYSI   +  G+  F I    D R G++   
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSI--TNGDGIGVFSISTDKDTREGILSLK 332

Query: 114 GKL-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
             L           I G    +  + +  G     T++++ V  G     P+F   +Y +
Sbjct: 333 KPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVM 390

Query: 163 NVSEGASINSTVATI 177
            V E A I + V T+
Sbjct: 391 EVYENAKIGTIVGTV 405


>gi|392334144|ref|XP_003753090.1| PREDICTED: protocadherin beta-13-like [Rattus norvegicus]
 gi|392354647|ref|XP_003751815.1| PREDICTED: protocadherin beta-13-like [Rattus norvegicus]
 gi|149017303|gb|EDL76354.1| protocadherin beta 16 (predicted) [Rattus norvegicus]
          Length = 800

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 14/194 (7%)

Query: 9   LDR--DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI-QAG 64
           LDR  D     + R  + A++      S    + V + DINDNAP+   +   +QI +  
Sbjct: 197 LDRVLDREEEAELRLTLTAQDGGSPPRSGTTEVHVEVLDINDNAPQFEQLFYRVQIPEDS 256

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
                I+ + ATD D+GVN EI+YS++ VSN     F I P +G +     L     + Y
Sbjct: 257 PIGFLIITVSATDKDIGVNGEISYSLFQVSNDISKTFSIHPLTGEVRLKEHLDFEKTQSY 316

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            I ++A D G  S +  +   VV   N  +P    + +  ++ E     + VA  +VS L
Sbjct: 317 EINIEARDAGTFSGKCTILTQVV-DVNDHAPEITLSAFTNSILENLP-ETMVAVFSVSDL 374

Query: 183 ASG------CAIMN 190
            SG      C+I +
Sbjct: 375 DSGENGKISCSIQD 388



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y ++S++ LDR+     ++   +   +         V+ TV ++D+NDNAP         
Sbjct: 402 YTLLSQKPLDREAV--AEYNITITVADMGNPILKTQVNFTVQVSDVNDNAPIFTQTSYTM 459

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
              +       I  I ATD+D G NA ITYS+       L    +D    +    G+L  
Sbjct: 460 FVRENDSPALHIGTISATDSDSGSNAHITYSLLPPQEPQL---ALDSLISINADNGQLFA 516

Query: 118 -------AGEQYSITVQATDTGGKS--SQTIVEVSVV 145
                  A + +   V ATD G  +  SQ +V V V+
Sbjct: 517 LRALDYEALQTFEFRVCATDGGSPALNSQALVRVVVL 553


>gi|395735679|ref|XP_002815500.2| PREDICTED: cadherin-18 [Pongo abelii]
          Length = 781

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 101 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 159

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 160 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 215

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 216 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 274

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 275 GSAVGKIKANDADTG 289



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 213 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 268

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 269 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 325

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 326 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 383

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 384 YENAKIGTVVGTV 396


>gi|344272202|ref|XP_003407924.1| PREDICTED: cadherin-18-like [Loxodonta africana]
          Length = 790

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 27/191 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
             Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKPLN 336

Query: 117 ----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                     I G    +  + +  G     T++++ V  G     P+F    Y + V E
Sbjct: 337 YEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPFYVMEVFE 394

Query: 167 GASINSTVATI 177
            A I + V T+
Sbjct: 395 NAKIGTIVGTV 405


>gi|332228097|ref|XP_003263228.1| PREDICTED: cadherin-18 isoform 1 [Nomascus leucogenys]
          Length = 790

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 392

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405


>gi|61162130|dbj|BAD91054.1| Af1-cadherin [Artemia franciscana]
          Length = 1566

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 18/162 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRL------PMIPPIQI 61
            DRD P   K  +  +    +G  A  V  + +V + D NDNAP          IP    
Sbjct: 176 FDRDEPKREKLLYVTVKAVDEGFPALDVLCTFSVTITDKNDNAPIFDKNDYRETIP---- 231

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           Q  +  + ++++ ATD D G NA ITYS+  +   + L  F+IDP+SG I+   K I  E
Sbjct: 232 QDSKVNQTVMRVAATDIDEGENARITYSLRANRDESDLDYFQIDPQSGFIKLV-KAIEAE 290

Query: 121 ----QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
               Q+ +   A D G  S++T  +V++ V   N R+P F +
Sbjct: 291 KVDYQFELVAAARDGGTPSNETTAQVNIKVVSSNRRAPEFTE 332



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 30/177 (16%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIE 74
           +Q+  R +     S    + + + D ND  P       I I++G           +++I 
Sbjct: 409 YQLNIRVQNDFDVSAETIVRLRVLDSNDEIPSF-----IDIESGSVLENSAVQTFVLRIR 463

Query: 75  ATDND-LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
           A D D    N ++TY +  +SNT    F ID  +G I T  +L   E   Y++TVQA D 
Sbjct: 464 AIDKDGTSPNNKVTYRL--LSNT--DTFSIDSETGEIRTLKRLDREETSSYAVTVQAQD- 518

Query: 132 GGKSS----------QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           G  SS          Q   +V V+   N   P F+Q TY+  ++E A INS V  +T
Sbjct: 519 GAPSSLRSDGLPNMYQKKFKVEVL-DQNDNPPRFEQPTYNAEIAEDADINSKVIEVT 574



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 9   LDRDPPNPG-KFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG 64
           +DRDPPN   + R  +IA ++    G   S  + + ++L+DINDNAP L M  P+     
Sbjct: 720 IDRDPPNGYPQARVNIIAEDRLEPNGKVQSNTLVVEIHLDDINDNAPFLNMEQPVVFNEN 779

Query: 65  EARRQIVKIEATDND 79
           +    I  + A DND
Sbjct: 780 QKPMLITNLTADDND 794



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 9/123 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YS 123
           + K+EA D D G   ++ Y I   S +   +F ++  +G I TT K+   ++        
Sbjct: 131 VTKVEAYDPDQGPAGKVRYEIIR-SQSAEKQFNVNSYTGEI-TTAKVFDRDEPKREKLLY 188

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           +TV+A D G  +   +   SV +   N  +P+F +N Y   + + + +N TV  +  + +
Sbjct: 189 VTVKAVDEGFPALDVLCTFSVTITDKNDNAPIFDKNDYRETIPQDSKVNQTVMRVAATDI 248

Query: 183 ASG 185
             G
Sbjct: 249 DEG 251


>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
          Length = 4963

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S  V + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 628 SLDRE--EQAFYSLLVLATDLGSPPQSSMVRINVSLLDINDNSP---VFYPVQYFAHIQE 682

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  I YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 683 NEPGGSYITTVSATDPDLGLNGTIKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 739

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 740 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 798

Query: 179 VSRL 182
            S +
Sbjct: 799 ASTM 802



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1777 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1831

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1832 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRMLDYEA 1889

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1890 QQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1948

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1949 VTDADDG 1955



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   A     ++T+N  D NDNAP+        P+   ++ G    +
Sbjct: 2928 NINRHSFIVTSSDRGNPALLSETTVTINTVDSNDNAPQFLKTKYFTPVTKHVKVG---TK 2984

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     L +   + + ITV
Sbjct: 2985 LIKVTAVDDKDFGLNSEVEYFILNENHLG--KFKLDNHTGWISVAAPLTSDLNQNFLITV 3042

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  S+ + V T++
Sbjct: 3043 TAKDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSVGAIVRTVS 3095



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
             S+TVN+ D+NDN+P    +P    P  ++   +   ++ + ATD D G NA I Y+I  
Sbjct: 3161 CSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTI-Q 3217

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             S++ L  F IDP +GV+ T G L     + Y +TV+A +   +   +   V++ + G N
Sbjct: 3218 SSDSDL--FVIDPNTGVVTTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTN 3275

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P F    Y   +SE A   + V  +  S
Sbjct: 3276 EYVPRFVSKLYYFEISEAAPTGTIVGEVFAS 3306



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 13/175 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1157 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1214

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   G+L   A   YS+ +QA D+
Sbjct: 1215 SASDVDEGSNGLIHYSV--IKGNEERQFAIDSTSGQVTLIGRLDYEATPAYSLVIQAVDS 1272

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F+   + V+V E   I   V+++T +   SG
Sbjct: 1273 GAVSLNSTCTLNIDILDENDNTPSFKSTLF-VDVLENMRIGELVSSVTATDSDSG 1326



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1709 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1765

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1766 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1822

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1823 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1852



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 534 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGATDGD 593

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G     
Sbjct: 594 LGDNGTVRFSLQE-AETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 652

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++V ++V +   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 653 SMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 696



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2093 LDRE--EVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLT 2150

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I ++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   YS
Sbjct: 2151 GTDITQVFAADGDEGTNGQVRYGI--VDGNANQEFRIDSVTGAI-TVAKPLDREKTPTYS 2207

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2208 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2251



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
           ++ +V+A     T  S+   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 844 YQLKVVASGGTVTGDSM---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 900

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
           D D GVN  + YS+        + F I+ R+G I   G L +    Y I + A+D G  +
Sbjct: 901 DPDEGVNGMVLYSL---KQNPKNLFTINERNGNISLLGPLDVHAGSYQIEILASDMGVPQ 957

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            S + +    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 958 LSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 995



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+NDN     +P+L  IP   PI          + K +ATD D G N+ I Y++
Sbjct: 2018 ISIILLDVNDNPPTFLSPKLTYIPENTPIDTI-------VFKAQATDPDSGPNSYIEYTL 2070

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPG 147
             + S    +KF I    G +  TG+L   E   Y++TV ATD G  S  +  EV V V  
Sbjct: 2071 LNPSG---NKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLD 2127

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +PVF Q  Y V ++E
Sbjct: 2128 INDNNPVFAQAMYKVEINE 2146



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN P     P + +I    + R+I+ + A 
Sbjct: 2617 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKEDPFVSEILENLSPRKILTVSAV 2676

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  ++    H F I+  +G I +   L   +  QY + V+++D G  
Sbjct: 2677 DKDSGPNGQLDYEI--INGNKEHSFSINHATGEIRSIRPLDREKISQYVLIVKSSDRGSP 2734

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2735 SQSTSVKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2780



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I + +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRFRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   V + ++   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2714 LDRE--KISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVPENSPLG 2771

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2772 YTVTRVTTSDEDIGVNAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2827

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2828 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2880



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPE-PSIVVSFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1037 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1094

Query: 66   AR--RQIVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1095 QRPGSFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRR 1151

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1152 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1206

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1207 NLTQVLRVSASDVDEG 1222



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 13/115 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     I  +  TD D+G N+E+ YS+  
Sbjct: 2434 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSF---IFAVTVTDADIGPNSELHYSL-- 2488

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
             S     KF ID   G I   G L    + + +V   D G   K+  T V V  V
Sbjct: 2489 -SGRNSEKFHIDTLRGAIMAAGALNGTSEVTFSVYVKDGGSVPKTDSTTVTVRFV 2542



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1496 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIV--- 1549

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1550 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1608

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1609 VFTQPKYITILKEGEPIGTNVISI 1632



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 66/149 (44%), Gaps = 32/149 (21%)

Query: 39  LTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           L + +NDIND+ P               PP    +G        + ATD D G+NA + Y
Sbjct: 443 LVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSATDGDSGLNANLRY 494

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-------EQYSITVQATDTGGKSSQTIVE 141
           SI  VS  GL  F I   SG++ TTG  +AG        Q  + + A D G     +  +
Sbjct: 495 SI--VSGNGLGWFHISEHSGLV-TTG--LAGGLDRELASQIVLNISARDQGVHPKVSYAQ 549

Query: 142 VSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           + V +   N   PVF Q   Y+V+V E A
Sbjct: 550 LVVTLLDVNDEKPVFSQPEGYNVSVVENA 578



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 942  GSYQIEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1000

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1001 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1058

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1059 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRPGSFVGKVS 1105



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I        IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3266 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPTGTIVGEVFASDRDLGSDGEVHYLIF--GN 3323

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3324 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3383

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG    + V  ++
Sbjct: 3384 -PPVFSLNIYSVQISEGVPTGTHVTFVS 3410



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 14/181 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAG 64
            ++LDR+      F   + A +    A +   ++ V ++DINDN P     M      +  
Sbjct: 2301 QSLDRETKE--HFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDA 2358

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
                 ++ + A+D D   NA I+Y I      G  +F I+P +G I T+  L     E Y
Sbjct: 2359 PTGTDVILVNASDIDASTNAVISYRII----GGNSQFTINPSTGQIITSALLDRETKENY 2414

Query: 123  SITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            ++ V A+D G     SS T V V+V    N   P FQ + Y  ++       S +  +TV
Sbjct: 2415 TLVVVASDAGSPEPLSSSTSVLVTVT-DVNDNPPRFQHHPYVTHIPSPTPPGSFIFAVTV 2473

Query: 180  S 180
            +
Sbjct: 2474 T 2474



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 6/146 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSN 95
             +L +++ D NDN P       + +       ++V  + ATD+D G NA++ YSI   +N
Sbjct: 1281 CTLNIDILDENDNTPSFKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGTNN 1340

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
             G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N   
Sbjct: 1341 HG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNP 1398

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F       ++ E   I ++V ++T
Sbjct: 1399 PTFPPGDIFKSIVENIPIGTSVISVT 1424



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1367 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIPIGT-----SVI 1421

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1422 SVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTVKAN 1480

Query: 130  D 130
            D
Sbjct: 1481 D 1481


>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
          Length = 4968

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S  V + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 633 SLDRE--EQAFYSLLVLATDLGSPPQSSMVRINVSLLDINDNSP---VFYPVQYFAHIQE 687

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  I YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 688 NEPGGSYITTVSATDPDLGLNGTIKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 744

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 745 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 803

Query: 179 VSRL 182
            S +
Sbjct: 804 ASTM 807



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1783 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1837

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1838 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRMLDYEA 1895

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1896 QQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1954

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1955 VTDADDG 1961



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1162 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1219

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   G+L   A   YS+ +QA D+
Sbjct: 1220 SASDVDEGNNGLIHYSV--IKGNEERQFAIDSTSGQVTLIGRLDYEATPAYSLVIQAVDS 1277

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1278 GAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1332



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   A     ++T+N  D NDNAP+        P+   ++ G    +
Sbjct: 2932 NINRHSFIVTSSDRGNPALLSETTVTINTVDSNDNAPQFLKTKYFTPVTKHVKVG---TK 2988

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     L +   + + ITV
Sbjct: 2989 LIKVTAVDDKDFGLNSEVEYFILNENHLG--KFKLDNHTGWISVAAPLTSDLNQNFLITV 3046

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  S+ + V T++
Sbjct: 3047 TAKDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSVGAIVRTVS 3099



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
             S+TVN+ D+NDN+P    +P    P  ++   +   ++ + ATD D G NA I Y+I  
Sbjct: 3165 CSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTI-Q 3221

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
             S++ L  F IDP +GV+ T G L     + Y +TV+A +   +   +   V++ + G N
Sbjct: 3222 SSDSDL--FVIDPNTGVVTTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTN 3279

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P F    Y   +SE A   + V  +  S
Sbjct: 3280 EYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3310



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1715 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1771

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1772 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1828

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1829 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1858



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 539 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGATDGD 598

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G     
Sbjct: 599 LGDNGTVRFSLQE-AETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 657

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++V ++V +   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 658 SMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 701



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2099 LDRE--EVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLT 2156

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   YS
Sbjct: 2157 GTDIIQVFAADGDEGTNGQVRYGI--VDGNANQEFRIDSVTGAI-TVAKPLDREKTPTYS 2213

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2214 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2257



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  S+   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 849  YQLKVVASGGTVTGDSM---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 905

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 906  DPDEGVNGMVVYSL---KQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQ 962

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             S + +    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 963  LSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 1000



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN P     P I +I    + R+I+ + A 
Sbjct: 2621 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKEDPFISEILENLSPRKILTVSAV 2680

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  ++    H F I+  +G I +   L   +  QY + V+++D G  
Sbjct: 2681 DKDSGPNGQLDYEI--INGNKEHSFSINHATGEIRSIRPLDREKISQYVLIVKSSDRGSP 2738

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2739 SQSTSVKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2784



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   V + ++   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2718 LDRE--KISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVPENSPLG 2775

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2776 YTVTRVTTSDEDIGVNAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2831

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2832 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2884



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPE-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGVIETTGKLIAG-------EQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG       +  G        QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1042 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1099

Query: 66   AR--RQIVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1100 QRPGSFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRR 1156

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1157 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1211

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1212 NLTQVLRVSASDVDEG 1227



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3270 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGSDGEVHYLIF--GN 3327

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3328 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3387

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG    + V  ++
Sbjct: 3388 -PPVFSLNIYSVQISEGVPTGTHVTFVS 3414



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 947  GSYQIEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1005

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1006 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1063

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1064 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRPGSFVGKVS 1110



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D+NDN P       L   P   I +      +  I A D D G N E+ Y I  
Sbjct: 1502 VTILVTDLNDNVPVFISQNALAADPSAVIGS-----VLTTIMAADPDEGANGEVEYEII- 1555

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+      
Sbjct: 1556 --NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLD 1612

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             PVF Q  Y   + EG  I + V +I
Sbjct: 1613 GPVFTQPKYITILKEGEPIGTNVISI 1638



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1286 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1344

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1345 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1402

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1403 NPPTFPPGDIFKSIVENIPIGTSVISVT 1430



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 17/149 (11%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITY 88
           A S   SL + +NDI ++ P +      ++   E       +  + ATD D G+NA + Y
Sbjct: 440 ARSSGASLGIFVNDIINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRY 499

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-------EQYSITVQATDTGGKSSQTIVE 141
           SI  VS  GL  F I   SG++ TTG  +AG        Q  + + A D G     +  +
Sbjct: 500 SI--VSGNGLGWFHISEHSGLV-TTG--LAGGLDRELASQIVLNISARDQGVHPKVSYAQ 554

Query: 142 VSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           + V +   N   PVF Q   Y+V+V E A
Sbjct: 555 LVVTLLDVNDEKPVFSQPEGYNVSVVENA 583



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2438 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2492

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
             S     KF ID   G I     L    + + +V   D G   K+  T V V  V
Sbjct: 2493 -SGRNSEKFHIDTLRGAIMAARPLNGTSEVTFSVHVKDGGSVPKTDSTTVTVRFV 2546



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1373 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIPIGT-----SVI 1427

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1428 SVTAHDPDADINGQLSYAIIQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTVKAN 1486

Query: 130  D 130
            D
Sbjct: 1487 D 1487


>gi|268557966|ref|XP_002636973.1| Hypothetical protein CBG09454 [Caenorhabditis briggsae]
          Length = 2592

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 20/154 (12%)

Query: 24  IAREKQGT--AASVPVSLTVNLNDINDNAPRL----PMIPPIQ-IQAGEARRQIVKIEAT 76
           I R K G   A S  VSLT+++ DIND+AP L     MI   + +  GE   ++ ++ A 
Sbjct: 447 IIRAKDGAQPALSSTVSLTIHVVDINDHAPTLIAAQKMITLEENVAIGE---EVGRVYAI 503

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
           D D G N  I YSI      G   F ID  SGVI+TT KL+  E   +YS+ V A D G 
Sbjct: 504 DEDSGPNGIIRYSI-----EGSEDFIIDEDSGVIKTT-KLLDRETTARYSLKVTARDMGT 557

Query: 134 KSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
               T   ++VV    N  +P+F +  Y+V +SE
Sbjct: 558 PPLNTSTTMTVVLKDINDNAPIFDKKEYNVTISE 591



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 16/180 (8%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQ 62
           +LDR+  +   F   V A +      +    + V L+DINDNAP+             I 
Sbjct: 756 DLDRE--DRATFSVIVTASDHATPPLNTSTQIEVILDDINDNAPQFTSSSYAATISEDIP 813

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGEQ 121
            G +    +++ A D D+G N  + Y +   S++  +H FR+D  SG +  + KL   EQ
Sbjct: 814 VGTS---FLQVSAIDADIGSNGIVDYFLNESSSSPAIHLFRLDRTSGTLRVSSKL-DREQ 869

Query: 122 YSIT---VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +++    + A D G  S     E+++ +   N  +P F+Q +YD+ ++E A   STV TI
Sbjct: 870 FAVILLPIFARDRGTPSLSASSEITLTLSDVNDNAPSFEQLSYDLYIAENAPAGSTVGTI 929



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 9/186 (4%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++  +V AR+      +   ++TV L DINDNAP           + E  R
Sbjct: 538 LDRE--TTARYSLKVTARDMGTPPLNTSTTMTVVLKDINDNAPIFDKKEYNVTISEEMPR 595

Query: 69  --QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSIT 125
             QI+K +A DND   + +ITY I            I  +  ++  +G+L     +  + 
Sbjct: 596 GSQIIKWKAVDND--EDQKITYRIEEADRDVFSILDIGDQGAILSVSGQLNKQDHKIRVE 653

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V ATD GG   + +V V  +   N+ +P F  + + V + E + I   V ++ V   A+G
Sbjct: 654 VSATDQGGLQGRCVVNV-FIDDVNS-APYFNDHPFSVKIPEHSPIGYPVISMKVCDFANG 711

Query: 186 CAIMNK 191
              ++K
Sbjct: 712 FRFISK 717



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%)

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           A D+D G NA + YSI   SN     F+IDP SG I     L   ++  +S+ V A+D  
Sbjct: 721 AEDHDRGDNARLVYSI--DSN---QFFKIDPSSGDISVASDLDREDRATFSVIVTASDHA 775

Query: 133 GKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                T  ++ V+    N  +P F  ++Y   +SE   + ++   ++
Sbjct: 776 TPPLNTSTQIEVILDDINDNAPQFTSSSYAATISEDIPVGTSFLQVS 822



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-IEATDN 78
           R  VIA +K          + + + D+NDNAP       I I        ++  ++ATD 
Sbjct: 342 RLDVIASDKGIPKKESKALVEITVLDVNDNAPVFASDSYITILENITLPTVIATVKATDE 401

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
           D G N ++ YS+   S++G+    ID  SG
Sbjct: 402 DFGTNGKVHYSM--ASSSGIGGLTIDYSSG 429


>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
          Length = 5085

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 9/169 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   V+A +      S    + VN+ D N+NAPR      + P+    G  +R +  +  
Sbjct: 3050 YSLTVVATDNGKPPLSSKTVVYVNVVDANNNAPRFDQRSYLYPVPENYGVGKRVVQLMAK 3109

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTG 132
             D D GVNAEI+Y + +V+  G   F ID +SG +    T   +     + + VQA D G
Sbjct: 3110 DDADFGVNAEISYFMTNVN--GSEYFSIDEKSGWVYVRNTLSNVPVRTTFLLKVQAIDKG 3167

Query: 133  GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                +  V ++ V+ G N  +P F   ++ V V E   +N+T+ T++ +
Sbjct: 3168 VPPQKDEVSLTLVISGENKHAPTFAAVSHQVRVPENEPVNTTILTVSAT 3216



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 77/164 (46%), Gaps = 17/164 (10%)

Query: 37   VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V+LT+ + D+NDNAPR   P        A +    +   +A D+D G N+ I   +Y + 
Sbjct: 2545 VNLTIFVKDVNDNAPRFSSPRYTAYVPGATKPGDFVFGAKAVDDDDGENSRI---VYRLQ 2601

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVP------G 147
                 KF IDP SGVI TT +L   E  Y + +QA+D G K  QT+    V+        
Sbjct: 2602 GIDAEKFVIDPNSGVIRTTQELANDETTYQLQIQASDCGVK-PQTVTADLVIHLWERQLF 2660

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI----TVSRLASGCA 187
            P+ RS +  + T   +V EG  I    AT     T S L  G A
Sbjct: 2661 PSFRSTISTRFTLPEDVPEGRVITKLSATTPKVGTASNLVYGMA 2704



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQ-IQAGEARRQIVK-IEA 75
           V AR+           +TVNL D ND+ P +     P  P    +    A+  IV  +  
Sbjct: 364 VFARDHGSPRQDGRTYVTVNLLDANDHDPEIKFSYFPSTPGFATVDENAAKDSIVAAVAV 423

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--QYSITVQATDT 131
            DND G+N E T  I   +   L  FR+D  P   ++   G+L   E  +Y++TV ATD 
Sbjct: 424 IDNDEGLNGETTVEIR--AGNELGHFRLDNTPSFDIVRVNGRLDREEIPKYNLTVVATDK 481

Query: 132 GGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           G    S T   V  V   N   PVFQQ+ Y   +SE +   S VA+I+ +   SG
Sbjct: 482 GTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISATDADSG 536



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 9/167 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
           K+   V+A +K     S    L +++ND+ND+ P         +  +       +  I A
Sbjct: 471 KYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISA 530

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG-- 133
           TD D G+NA I Y     +  G   F ID  +G++ T   L    Q SI +  +   G  
Sbjct: 531 TDADSGLNARIYYDFDSGNEQGW--FAIDQDTGLVTTVATLDREVQGSIELHVSARDGGP 588

Query: 134 --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             K + T ++V+++   N  +P F QN   V +SE     S VAT+T
Sbjct: 589 NPKYASTHLKVTIL-DENDEAPRFSQNVVRVTLSENTPPQSLVATLT 634



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 14/149 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
            V +TV L D+ND +P    I P +I   E   +   ++ I+A D D G N  + YS+   
Sbjct: 2122 VQVTVVLLDVNDMSPEF--ISPTKISIIENAPSNTVVMAIKAVDRDEGRNGYVEYSL--- 2176

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPN 149
             +T L  F + P  G++  +G L       Y++ V A D G   +SS T V V+V+   N
Sbjct: 2177 EDTTL-PFTVGPVDGLLRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTAVTVTVL-DEN 2234

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
              SPVF    Y   V+E ASI ++V  ++
Sbjct: 2235 DNSPVFDPRQYSATVAENASIGASVLQVS 2263



 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 10/145 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P+   +P  +Q+  G A   Q++++  TD D G+N ++ YS+   +
Sbjct: 1233 VKVVIYITDVNDNIPQFQRLPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGN 1292

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPN 149
              G  +F ID  +G I  T +L     + Y +TV A D G +   SS T V + V+   N
Sbjct: 1293 QHG--RFAIDEATGQISLTKELDRETTDAYVLTVVAHDAGLETRLSSSTTVHIEVL-DEN 1349

Query: 150  TRSPVFQQNTYDVNVSEGASINSTV 174
               P+F  +   ++V E    N+ +
Sbjct: 1350 DNVPLFVDDKSSISVLETTPTNTEL 1374



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 12/149 (8%)

Query: 38   SLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHV 93
            S+ + + DINDN PR P   +   + ++   A  Q V +  A D D   NA I YS+ H 
Sbjct: 915  SVNITVLDINDNPPRFPKGEIGDEVLLKENAAVGQEVCLARARDRDASANARIVYSLTH- 973

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
             N G  +FR+   SG+I     + A  G    + V ATD+G +  S+Q  V V+ +   N
Sbjct: 974  -NPG-GQFRVAENSGIIYLDKPIRAAPGTVLHLEVTATDSGNQPLSAQHQVRVT-IEDVN 1030

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +PVF+  +Y+ ++ E   +N    ++T
Sbjct: 1031 DHTPVFKLTSYETSLPESTPVNDRFFSLT 1059



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           + +K NLDR+     +++  VIA+++     S   ++ + L D+NDN+P     R  M  
Sbjct: 671 LTTKVNLDRE--TTAEYQILVIAKDQGTPPQSSTATVILTLEDVNDNSPVFYPWRYLMPI 728

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +   + K+ ATD D   NA++ YS+    + G   F +D R+G I   G L 
Sbjct: 729 PEDAPPGTS---VGKVTATDADARENAQVRYSL---ESGGEGLFTVDERTGEITLQGSLR 782

Query: 118 AGEQ--YSITVQATDTGGK 134
           A  +  Y + + A DTG +
Sbjct: 783 AAHKTLYELNISAKDTGDR 801



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 27/181 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----------IPPIQIQAGEAR 67
            +   V  R+    A    V L VN+ D NDNAP +              PP+ +      
Sbjct: 2735 YEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPIMEAAIYNATVPEDEYPPLFVN----- 2789

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
                K+ A D D G N +++Y   ++ N     F ID  +G I T  KL   E   Y + 
Sbjct: 2790 ----KVSANDRDSGENGQVSY---YLVNDFTETFVIDSDTGEISTNAKLDREEIASYELI 2842

Query: 126  VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V+A D G  S + T   +  V   N   P F +  + VNV+E A I + V  IT S L  
Sbjct: 2843 VEARDQGQPSLTGTATVLLTVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSDLDI 2901

Query: 185  G 185
            G
Sbjct: 2902 G 2902



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            ++LT+ + D NDNAP           P  +  G    Q+V  +A  N  G N++++Y++ 
Sbjct: 1909 IALTIQVTDTNDNAPTFQSTAYSFDVPENVPRGSRIGQVVATDADAN--GPNSQLSYTL- 1965

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVEVSVVPG 147
             +S+     F ++P +GV   T  L     + Y + VQATD G    SS   V  +VV  
Sbjct: 1966 -ISDWANDVFSLNPSTGVFTLTASLDYEQVQHYILVVQATDGGIPALSSTVTVYCNVV-D 2023

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N  +P+F+   +  ++ E  +I + + ++    L SG
Sbjct: 2024 LNDNAPIFEAGPHAADIVENTTIGTPILSVAAQDLDSG 2061



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            ++++ +ATDNDLG N+E+ ++I   +      F IDP +G +     L     E+Y++ V
Sbjct: 1373 ELLRFKATDNDLGPNSELAFAI--SAGNRRDTFYIDPLTGTLYLRKPLDYEELEKYTLNV 1430

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +D G    SS T + V V+   N   PVF        + EG  +++ + TIT
Sbjct: 1431 TCSDGGHPRLSSVTTLIVEVIDA-NDNPPVFPNTAIARQIREGILVHTPIVTIT 1483



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 24/195 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
            V+ +E LD        +  +V A ++   + S  V + V++ D NDNAP       +  +
Sbjct: 1097 VLDREELD-------YYALEVTATDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFVLHL 1149

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT----GKL 116
            +  E     V K+ ATD D+G NA++ +S+          F +DPR+G I++      +L
Sbjct: 1150 RENEPPDTFVGKLLATDRDVGRNADLVFSL----PASQQDFTVDPRNGFIKSLRVFDREL 1205

Query: 117  I---AGEQYSITVQA--TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
            +    G  Y IT++A  TD G    +  V+V + +   N   P FQ+  Y V V+EGA+I
Sbjct: 1206 LVTNTGSSY-ITLEATVTDNGVNRLRDRVKVVIYITDVNDNIPQFQRLPYRVQVNEGAAI 1264

Query: 171  NSTVATITVSRLASG 185
             + +  +  +    G
Sbjct: 1265 GTQLLRVYTTDADEG 1279



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 23/184 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  +F   V++ +      + P+ + + + DINDN P  P    I +   E+  
Sbjct: 125 LDREALSSDRFDLVVLSSQ-----PTYPIEVRILVLDINDNDPEFPE-SSIAVSFSESAV 178

Query: 68  --RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID----PRSGV----IETTGKLI 117
              +++   ATD D   N  +    + V+     KFR++    P        +ETTGKL 
Sbjct: 179 VGTKLLLDAATDKDTLENG-VVDDYFIVNGNTDEKFRLEVTGNPTGETSYLHLETTGKLD 237

Query: 118 AG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
               E YS+ V A D G   +    +V V+V+   N   P+FQQ+ Y V ++E A + + 
Sbjct: 238 REQVEFYSLNVCARDRGRPPRLGYLLVNVTVL-DVNDNPPIFQQSDYVVALNESAPVGTK 296

Query: 174 VATI 177
           V T+
Sbjct: 297 VLTV 300



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 75/185 (40%), Gaps = 8/185 (4%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
           LV +   LDR+    G     V AR+           L V + D ND APR    +  + 
Sbjct: 562 LVTTVATLDREVQ--GSIELHVSARDGGPNPKYASTHLKVTILDENDEAPRFSQNVVRVT 619

Query: 61  IQAGEARRQIVK-IEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI- 117
           +      + +V  + A DND G N  + YS +  VS      F +D  +G + T   L  
Sbjct: 620 LSENTPPQSLVATLTAVDNDQGTNGSVAYSFHSSVSRDYPKTFALDGLTGQLTTKVNLDR 679

Query: 118 -AGEQYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               +Y I V A D G    S T   +  +   N  SPVF    Y + + E A   ++V 
Sbjct: 680 ETTAEYQILVIAKDQGTPPQSSTATVILTLEDVNDNSPVFYPWRYLMPIPEDAPPGTSVG 739

Query: 176 TITVS 180
            +T +
Sbjct: 740 KVTAT 744



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   V AR++   + +   ++ + + D NDN P+   +  + + +  E  
Sbjct: 2831 LDRE--EIASYELIVEARDQGQPSLTGTATVLLTVLDKNDNPPQFTRLFSVNVTENAEIG 2888

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              +++I ++D D+G NA +TY      N G  KF +D  SG +   G L   EQ  Y + 
Sbjct: 2889 TFVIRITSSDLDIGQNANVTYRF--TENPG-EKFAMDALSGNVTVNGHLDREEQDEYLLK 2945

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + A D G   + T + ++ +   N   P F + +Y  +  E
Sbjct: 2946 LVAAD-GAWQAATALTIT-IQDQNDNPPEFDEESYHFHFPE 2984



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++  +N+  P+   P+      ++ E    +  ++ATD D G +  + Y     SN
Sbjct: 3387 TVLVHITGVNEYYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDAGEDGRVYYLFVGSSN 3446

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG----KSSQTIVEVSVVPGPN 149
                 F I   +G+I  + +L    Q  +  TV   + GG     + +  V VS+  G +
Sbjct: 3447 D--RGFSIGSETGIIRVSRRLDRETQNRVVLTVMTKNGGGIRGNDTDEAQVIVSIQDGND 3504

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F Q+TYD  VSEGA+  + V T+
Sbjct: 3505 --PPEFLQSTYDATVSEGATHGTRVLTV 3530



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 25/164 (15%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +  +V A+++     S   ++TV + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2206 YTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSP---VFDPRQYSATVAENASIGASVLQV 2262

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----------IAGEQY 122
             A D D G N  + YSI    +     F I    GVI     L           I GE  
Sbjct: 2263 SAMDRDEGANGRVRYSIAMGDDN--RDFTISEDGGVIRVAKNLNFERKSRYYLTIRGEDC 2320

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +  V  T  G  +  TI  + +    N  +PVF  + Y  +V E
Sbjct: 2321 ASEVGETPRGDTAQVTITVIDI----NDNAPVFLDSPYLAHVME 2360



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 8/153 (5%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTVN++DINDN P     +      +       + K+ A D D    A I Y I  +  T
Sbjct: 3282 LTVNVSDINDNPPTFNQSIYEAYLPENSPPDSFVYKVIARDIDSPKYAVIQYKI--LGGT 3339

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV----PGPNTRS 152
            G   FRI   +G I +       E    T+        S+  +V  + V     G N   
Sbjct: 3340 GKDHFRIREDTGEIASLISFDYEEANEYTLDIVAANPDSNPQMVGFTTVLVHITGVNEYY 3399

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P F Q  + ++VSE A + ++V  +  +   +G
Sbjct: 3400 PKFIQPVFHMDVSESAEVGTSVGLVQATDQDAG 3432



 Score = 36.6 bits (83), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 9/165 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F  +V A +K        VSLT+ ++  N +AP    +   Q++  E       I+ + A
Sbjct: 3157 FLLKVQAIDKGVPPQKDEVSLTLVISGENKHAPTFAAVSH-QVRVPENEPVNTTILTVSA 3215

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG 133
            TD D G N  I Y I   +    ++F +   +G +     L     ++Y + + ATD G 
Sbjct: 3216 TDGDDGPNGMIRYKI--SAGNEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITATDLGF 3273

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +  Q +  ++V V   N   P F Q+ Y+  + E +  +S V  +
Sbjct: 3274 EPKQAVAILTVNVSDINDNPPTFNQSIYEAYLPENSPPDSFVYKV 3318


>gi|291395171|ref|XP_002714124.1| PREDICTED: cadherin 18, type 2 [Oryctolagus cuniculus]
          Length = 790

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 27/191 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
             Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     L 
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIINGDGVGVFSISTDKETREGILSLKKPLN 336

Query: 117 ----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                     I G    +  + +  G     T++++ V  G    +P+F   +Y + V E
Sbjct: 337 YEKKKSYTLNIEGANTHLDFRFSHLGPFKDATVLKIIV--GDVDEAPLFSMPSYVMEVYE 394

Query: 167 GASINSTVATI 177
            A I +TV T+
Sbjct: 395 NAKIGTTVGTV 405


>gi|149017343|gb|EDL76394.1| rCG49295, isoform CRA_ad [Rattus norvegicus]
          Length = 869

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++++ ATD D G+NAE TYS   V+N   H+F +DP +G I T   L     EQY+I V+
Sbjct: 261 VLRLRATDQDEGINAEFTYSFLGVANKAQHEFSLDPVTGDIITLQSLDFEEVEQYTIDVE 320

Query: 128 ATDTGGKSSQTIVEVSVV 145
           A D G  SSQ  V + V+
Sbjct: 321 AKDRGSLSSQCKVIIEVL 338



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F+  + AR++   A S  VS+ V + D NDNAPR+  P + P       +  +A E    
Sbjct: 528 FQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAEPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + K+ A D D G NA ++Y +   S+ GL  F +  R+G + T   L
Sbjct: 588 VTKVVAVDADSGHNAWLSYHVLQASDPGL--FSLGLRTGEVRTARAL 632



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQ---YSI 124
           +   +  D D G NAE+T S+     +G + F+I   S       T  ++  EQ   Y++
Sbjct: 366 VALFKVRDRDSGENAEVTCSL-----SGNNPFKIHSSSNNYYKLVTDSILDREQTPGYNV 420

Query: 125 TVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+ ATD G    SS T + ++V    N  +PVFQQ  Y +NV E
Sbjct: 421 TITATDRGKPPLSSSTTITLNVA-DVNDNAPVFQQQAYLINVPE 463



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y +V+   LDR+   PG +   + A ++     S   ++T+N+ D+NDNAP         
Sbjct: 402 YKLVTDSILDREQ-TPG-YNVTITATDRGKPPLSSSTTITLNVADVNDNAPVFQQQAYLI 459

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIET 112
             P   Q G +   I ++ A D D+G N  ++YSI    +    L  F  ++  SGV+  
Sbjct: 460 NVPENNQPGTS---ITQVRAWDPDVGSNGLVSYSIIASDLEPKVLSSFVSVNQDSGVV-F 515

Query: 113 TGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPG 147
             +    EQ   + +T+QA D G  +    V + V+ G
Sbjct: 516 AQRAFDHEQLRSFQLTLQARDQGSPALSANVSMRVLVG 553


>gi|58865998|ref|NP_001012215.1| protocadherin gamma-B7 precursor [Rattus norvegicus]
 gi|56269452|gb|AAH87084.1| Protocadherin gamma subfamily B, 7 [Rattus norvegicus]
 gi|149017342|gb|EDL76393.1| rCG49295, isoform CRA_ac [Rattus norvegicus]
          Length = 931

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++++ ATD D G+NAE TYS   V+N   H+F +DP +G I T   L     EQY+I V+
Sbjct: 261 VLRLRATDQDEGINAEFTYSFLGVANKAQHEFSLDPVTGDIITLQSLDFEEVEQYTIDVE 320

Query: 128 ATDTGGKSSQTIVEVSVV 145
           A D G  SSQ  V + V+
Sbjct: 321 AKDRGSLSSQCKVIIEVL 338



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F+  + AR++   A S  VS+ V + D NDNAPR+  P + P       +  +A E    
Sbjct: 528 FQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAEPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + K+ A D D G NA ++Y +   S+ GL  F +  R+G + T   L
Sbjct: 588 VTKVVAVDADSGHNAWLSYHVLQASDPGL--FSLGLRTGEVRTARAL 632



 Score = 39.7 bits (91), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQ---YSI 124
           +   +  D D G NAE+T S+     +G + F+I   S       T  ++  EQ   Y++
Sbjct: 366 VALFKVRDRDSGENAEVTCSL-----SGNNPFKIHSSSNNYYKLVTDSILDREQTPGYNV 420

Query: 125 TVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+ ATD G    SS T + ++V    N  +PVFQQ  Y +NV E
Sbjct: 421 TITATDRGKPPLSSSTTITLNVA-DVNDNAPVFQQQAYLINVPE 463



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y +V+   LDR+   PG +   + A ++     S   ++T+N+ D+NDNAP         
Sbjct: 402 YKLVTDSILDREQ-TPG-YNVTITATDRGKPPLSSSTTITLNVADVNDNAPVFQQQAYLI 459

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIET 112
             P   Q G +   I ++ A D D+G N  ++YSI    +    L  F  ++  SGV+  
Sbjct: 460 NVPENNQPGTS---ITQVRAWDPDVGSNGLVSYSIIASDLEPKVLSSFVSVNQDSGVV-F 515

Query: 113 TGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPG 147
             +    EQ   + +T+QA D G  +    V + V+ G
Sbjct: 516 AQRAFDHEQLRSFQLTLQARDQGSPALSANVSMRVLVG 553


>gi|341875497|gb|EGT31432.1| hypothetical protein CAEBREN_03512 [Caenorhabditis brenneri]
          Length = 1866

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)

Query: 38  SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQ---IVKIEATDNDLGVNAEITYSI 90
           +L + + D+N+N P  P         +IQ G  +     IVK++ATD+D   N +I YS+
Sbjct: 843 TLLIGIEDVNNNKPEFPDCSKYSEIAKIQEGTYKTDPPTIVKVQATDDDSSANGDIVYSL 902

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-V 145
           Y   +     F ID  +G++  +  ++   +      +TV+ATD G +      + SV V
Sbjct: 903 YCTQSESRKAFVIDRHTGILTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV 962

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P F++ +Y+ +VS   +I ++V T+
Sbjct: 963 VDVNDNAPQFERPSYETSVSRYEAIGTSVITV 994



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ----- 60
            LDRDPP     + F V A +  G        + VN+ DINDN+P  P  +   I+     
Sbjct: 1558 LDRDPPTGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGFIEENREP 1617

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN---TGLHKFRIDPRSGVIETTGKL- 116
            I +       V+    D+    NA I Y I  V N    G   FRID  +G I     L 
Sbjct: 1618 IHSDGVYFMDVQARDFDDPTTENANIEYGI--VRNKLINGEPVFRIDQNTGKIFAMRSLD 1675

Query: 117  --IAGE-QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
              I+ E ++ I V+A D G  S +    V++ V   N  +P F++  Y+ +V E A I +
Sbjct: 1676 REISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVDETAPIGA 1735

Query: 173  TVATIT 178
             V + +
Sbjct: 1736 AVMSFS 1741



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARR 68
           DP  P   + +V ARE    +    V LT+ ++D+NDN P     P    Q  E     +
Sbjct: 597 DPALPKTHKLKVTAREDNRESH---VDLTIRIDDVNDNVPTFTR-PLYTAQVREDIPLNQ 652

Query: 69  QIVKIEATDNDLGVNAEITYSI 90
            I+K+ A D D G N+ ITY++
Sbjct: 653 TILKVTAIDKDSGENSRITYTV 674



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 38  SLTVNLNDIND-----NAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           ++ +++ D+++     N+P LPM+   P+    G    Q V   A D +   ++ I Y  
Sbjct: 402 TIRIHVEDVDEPPSFVNSP-LPMLAVVPLNPTIGRIVYQFV---ARDENGDGDSNILYKE 457

Query: 91  YHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYSITVQATDT--GGKSSQTIVEVSVVP- 146
             V   G   F +D +SGV+ T   K   GE Y I+ QA DT     SS  + EV+++  
Sbjct: 458 IDVIPAG--SFVVDSKSGVVRTGWSKYERGETYRISAQAIDTTPSNNSSSQLSEVAILEI 515

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
               R P F +  Y+V VSE   ++ +V  +      S
Sbjct: 516 LAEERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRS 553


>gi|307210686|gb|EFN87109.1| Putative fat-like cadherin-related tumor suppressor-like protein
           [Harpegnathos saltator]
          Length = 1079

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 16/139 (11%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D+NDNAP+    +   +I +       + +  ATD DLG NA + YS+  V+ T
Sbjct: 782 LPVTVLDVNDNAPKFDKSLASFRISETALNGTNVWRANATDADLGDNARVAYSL--VTET 839

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------SQTIVEVSVVPG 147
               FR+DP +GV+   GKL    Q  Y + ++A D GGKS       S  +V V+ V  
Sbjct: 840 A--DFRVDPVTGVLSVFGKLDRERQEIYELRIRARDNGGKSSDDPPLYSDALVRVT-VDD 896

Query: 148 PNTRSPVFQQNTYDVNVSE 166
            N  +P F  ++Y+V + E
Sbjct: 897 VNDNAPTFALSSYNVKIRE 915



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 10/109 (9%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEI 86
           GT       + +N+ D NDN P     P  ++   E   A   +V++ A D D G NA I
Sbjct: 404 GTRKQSSAKVKINVVDTNDNDPTFDQ-PEKEVWIDENEPAGTSVVRVTAKDRDSGENAYI 462

Query: 87  TYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           +YSI ++       F ID  SG+++T   L       +Y + V+A+D G
Sbjct: 463 SYSIDNIKKV---PFEIDHFSGIVKTRQVLDYETMKREYLLHVRASDWG 508



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)

Query: 23  VIAREKQGTAASVPVS------LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIE 74
           V+A+++     SV  S      +T+ +  +N  AP + +  +P I   +      IV++ 
Sbjct: 173 VLAKDRGALFRSVGASRASTAKVTIRVRQVNLYAPEIYVHHLPDIVEHSNADIYAIVRV- 231

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSG-----VIETTGKLIAGEQYSIT 125
             D D G + +I  S+  V       FR+     PRSG     V+    +  A + Y++T
Sbjct: 232 -IDRDEGPHGQIA-SLEIVGGDPAGHFRVRQVSGPRSGEYNIEVLHLLDRETALQGYNLT 289

Query: 126 VQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
           ++ATD G   + S   V V +    N  +PVF +  Y+V V E A IN+ V  + V+   
Sbjct: 290 LRATDRGVPQRYSYKFVPVHLT-DLNDNAPVFSREIYEVKVPETAPINTPVIRLKVTDAD 348

Query: 184 SG 185
            G
Sbjct: 349 EG 350



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 18/108 (16%)

Query: 33  ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEIT 87
           A+V V++ ++ ND+N      P+  P + +          R I+++ A D DLG N EI 
Sbjct: 84  ATVVVTI-LDTNDLN------PLFYPTEYETTVTEDTPLHRSILRVIAEDADLGRNGEIY 136

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           YS    ++    +F + P SGVI  T  L   E+  + + V A D G 
Sbjct: 137 YSFAEETD----QFAVHPVSGVITLTRPLRYAERAIHELVVLAKDRGA 180


>gi|410909492|ref|XP_003968224.1| PREDICTED: cadherin-18-like [Takifugu rubripes]
          Length = 808

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 18/183 (9%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQI 61
           ++LDR+  +      Q + R  +  A        + + DINDNAP+ P  P     P   
Sbjct: 115 KSLDREKKSHYVLHAQALDRYTE-EALEPKSEFIIKVQDINDNAPKFPDGPFVATVPEMS 173

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---A 118
           + G +  Q+   +A D   G +A I YSI      G   F +DP++G+I T    +   A
Sbjct: 174 EVGTSVLQVTASDADDPTYGNSARIVYSILQ----GQPYFSVDPKTGIIRTALADMDREA 229

Query: 119 GEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E Y++ +QA D     GG S  T + +++    N   P F Q  Y + V E A +   V
Sbjct: 230 REHYTVVIQAKDMAGQVGGLSGSTTINITLT-DINDNPPKFPQKNYQLYVPESAQVGKPV 288

Query: 175 ATI 177
             I
Sbjct: 289 GKI 291



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 25/174 (14%)

Query: 25  AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATD 77
           A++  G    +  S T+N  L DINDN P+ P     +  P   Q G   + + KI+A D
Sbjct: 239 AKDMAGQVGGLSGSTTINITLTDINDNPPKFPQKNYQLYVPESAQVG---KPVGKIKAND 295

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKL--IAGEQYSITVQATDT 131
           +DLG+NA+I YSI  +++ G + F I    D + G+I     L     + Y++ ++  +T
Sbjct: 296 DDLGINADIKYSI--INSEGANTFSISADRDTKEGIISLKKPLNYERKKSYTLHIEGMNT 353

Query: 132 GGK-------SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                     S +    + +  G     PVF  + Y ++V E A   + V  +T
Sbjct: 354 HADPRFSYLGSFKDTATLKITVGDVDEGPVFSIDHYIMDVYENAPRGTEVGAVT 407


>gi|195354342|ref|XP_002043657.1| GM19756 [Drosophila sechellia]
 gi|194127825|gb|EDW49868.1| GM19756 [Drosophila sechellia]
          Length = 1638

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38  SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ VN+ DINDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 454 TVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 513

Query: 96  TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
            G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 514 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNHAYVNISIL-DINDN 570

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           SP F QN Y +NV+E   + S +  +
Sbjct: 571 SPKFLQNLYRINVNEDIFVGSKILDV 596



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 10/170 (5%)

Query: 18  KFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKI 73
           KF F  I     GT   S    + +++ DINDN+P+  +    +I   E      +I+ +
Sbjct: 538 KFYFLTIQAIDGGTPPLSNHAYVNISILDINDNSPKF-LQNLYRINVNEDIFVGSKILDV 596

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDT 131
           +ATD D  VN  +TY+I    N G  +F IDP++G I  +  L       Y++ +QA D 
Sbjct: 597 KATDEDSDVNGLVTYNIERGDNIG--QFLIDPKNGTISVSRPLDRETISHYTLEIQACDQ 654

Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           G       V +++ +   N  +P+F    Y V + E   +     T  +S
Sbjct: 655 GDPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYIFLTFKIS 704



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20  RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
           +++++A  + G   +      + + +NDINDN P   M      +P    +  +    I 
Sbjct: 330 KYKLVAHVQDGKDFTQECFSEVIITVNDINDNTPIFSMAQYRVSVP----EDAQLNTLIT 385

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
           K+ A D D GVN +I YS+   ++     F+I   +G+I     L       +++TV+A 
Sbjct: 386 KVHAMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLDKSLDRETISLFNLTVKAE 442

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           D G     +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 443 DCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 499



 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 22  QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
           Q + RE+Q           ++VPV      + +++ D NDN P+           +  E 
Sbjct: 12  QTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 71

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +VK+ ATD D G N +I Y +   +    + F ID  SG I     L      +Y+ 
Sbjct: 72  VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 131

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            V A D G       V V++ +   N  +PVF+     ++V E A
Sbjct: 132 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENA 176


>gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
          Length = 4186

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 997  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1056

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1057 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1115

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1116 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1160



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 454 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 506

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 507 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 566

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 567 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 626

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 627 DVRPHTVVLRVTAT 640



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 916  INITDANTHRPVFQS-AHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLL----EDN 970

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 971  LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 1029

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 1030 QFVASHYTGLVSEDAPPFTSVLQISAT 1056



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 414 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 473

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 474 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 528



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 784 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 840

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 841 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 896

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 897 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPMGSTIVVISAS 953



 Score = 43.9 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1120 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1176

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1177 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1234

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1235 NSPVLNNFQILFNNYVSNRSD 1255



 Score = 43.5 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 596 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 653

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 654 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 711

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N   P+F    + V+V E A +  +V  I
Sbjct: 712 VDI------NDHIPIFVSTPFQVSVLENAPLGHSVIHI 743


>gi|449475300|ref|XP_004175474.1| PREDICTED: uncharacterized protein LOC100229528 [Taeniopygia guttata]
          Length = 1696

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            +V + A+D D G N EI YSI+  S   L  F+I+P +G I     L   E+  Y I VQ
Sbjct: 1141 VVVVSASDLDAGTNGEIVYSIFQNSEENLQTFKINPETGQIHLKKPLDYEEKKTYEIDVQ 1200

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            ATD GG S+   VEV  V   N  +P     +    +SE A  N+ VA   V    SG
Sbjct: 1201 ATDGGGLSTHCKVEVQ-VKDVNDNAPEVIITSLTSTLSEAAPPNTVVALFNVRDRDSG 1257



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 17/151 (11%)

Query: 45  DINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           D NDN      IP  + +  E R        + +V++ A D D G N E+ Y+    S  
Sbjct: 234 DANDN------IPVFERETYEVRLAENSPLEQLVVRVAAADPDEGSNGEVRYAFTQTSER 287

Query: 97  GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
               F+++  +G I   GKL   E   + + V+ATD G  S    V+V V+   N  +P 
Sbjct: 288 SRQLFQLNATTGEIRVAGKLDFEEAKSHKMVVKATDGGELSGHCKVQVEVL-DVNDNAPE 346

Query: 155 FQQNTYDVNVSEGASINSTVATITVSRLASG 185
               +   ++ E A   + VA  +V    SG
Sbjct: 347 IALTSLSASIPEDAPPRTVVALFSVRDRDSG 377



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 12/164 (7%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
            Y +V+ E LDR+     ++   V AR++   A S   +L V L D+NDNAP     I  +
Sbjct: 1282 YALVTSETLDRE--QVEEYNVTVRARDEGSPALSASKTLFVRLLDVNDNAPTFTQAIYTM 1339

Query: 60   QIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGK 115
             I   E A R +  + ATD D G NA + YS+       L       +D  SG + +   
Sbjct: 1340 VISENEPAGRSLGHLSATDPDAGENAHVRYSLVPPPPGTLAAASFVSVDAESGTVRSLRP 1399

Query: 116  LIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVF 155
            L   +     +TV+A D G    S+Q ++ + VV   N  +PV 
Sbjct: 1400 LDYEKVRALEVTVRAADGGSPPLSAQAVLRI-VVRDENDNAPVL 1442



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 33/215 (15%)

Query: 3    VVSKENLDRDP----PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PM 55
            +V +E +DR+       P   RF+V+      +         V L DIND+AP      +
Sbjct: 964  LVVREQMDREELCGQSEPCLVRFEVLLESPLQS-----FRAEVRLTDINDHAPVFLNKEI 1018

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG------- 108
            +  I   A    R +++  A D D+G N+   YSI   SN   H +    RSG       
Sbjct: 1019 VLKIPESAIPGTRFLLE-SAHDPDVGNNSLQHYSIS--SNEYFHVY-TQRRSGGGRYAEL 1074

Query: 109  VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            V++         + +  + A D G   +S   ++ V +V   N   PVF Q+ Y V+V E
Sbjct: 1075 VLDRALDREQQAEVAFIITAGDGGNPPRSGTALIRV-IVLDTNDNIPVFTQSLYKVSVME 1133

Query: 167  GASINSTVATITVSRLASG-------CAIMNKEEN 194
             +S ++ V  ++ S L +G           N EEN
Sbjct: 1134 NSSEDTIVVVVSASDLDAGTNGEIVYSIFQNSEEN 1168



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSL---TVNLNDINDNAPRLP---M 55
           ++ +KE+LDR+   P      +I +         P+ L    V + D+NDN+P  P   M
Sbjct: 83  VLTAKESLDREEICPQSDTCTLIFK----IFFENPLQLIRGEVEVRDVNDNSPVFPEKEM 138

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY---HVS-NTGLHKFRIDPRSGVIE 111
           +  I   A    R  ++  A D D+G+N    YS+    H S   G  K  +     V++
Sbjct: 139 VLKILETASPGSRFPLE-SAQDKDVGINGLQNYSLGPNPHFSLAIGTAKDGVKYLELVLQ 197

Query: 112 TTGKLIAGEQYSITVQATDTGGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASI 170
                    + ++ + ATD G        +V  VV   N   PVF++ TY+V ++E + +
Sbjct: 198 RQLDREEQAELNLLLTATDGGSPPRSGTAQVRIVVVDANDNIPVFERETYEVRLAENSPL 257

Query: 171 NSTVATITVS 180
              V  +  +
Sbjct: 258 EQLVVRVAAA 267



 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 19/142 (13%)

Query: 21  FQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE-------ARRQ 69
            +V  R   G   S P+S    L + + D NDNAP L    P    AGE       +   
Sbjct: 525 LEVTVRAADG--GSPPLSAQAVLRIVVRDENDNAPVLLHPGPDSSAAGELVPRWAPSGYL 582

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET----TGKLIAGEQYSIT 125
           + K+ A D D G NA ++Y +   +  GL  FR+   SG + T    T +    ++  + 
Sbjct: 583 VAKVVAVDADAGQNAWLSYELAKATEPGL--FRVGLHSGEVRTARAVTERDAPRQRLIVL 640

Query: 126 VQATDTGGKSSQTIVEVSVVPG 147
           VQ      +S+   + V++V G
Sbjct: 641 VQDRGQPSRSATATLAVALVDG 662



 Score = 36.6 bits (83), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 15/103 (14%)

Query: 21   FQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE-------ARRQ 69
             +V  R   G   S P+S    L + + D NDNAP L    P    AGE       +   
Sbjct: 1408 LEVTVRAADG--GSPPLSAQAVLRIVVRDENDNAPVLLHPGPDSSAAGELVPRWAPSGYL 1465

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            + K+ A D D G NA ++Y +   +  GL  FR+   SG + T
Sbjct: 1466 VAKVVAVDADAGQNAWLSYELAKATEPGL--FRVGLHSGEVRT 1506


>gi|442623252|ref|NP_001260871.1| starry night, isoform F [Drosophila melanogaster]
 gi|440214275|gb|AGB93404.1| starry night, isoform F [Drosophila melanogaster]
          Length = 3648

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSP---TFEAEQF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
          Length = 2408

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 677 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 736

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
           D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 737 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAMPVYELTAYAVDRGVP 795

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 796 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 840



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 134 LIRTEAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVVDRNDHSPVFE-----QA 186

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y     S         F IDPRSG+I 
Sbjct: 187 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPSAARAAAAAAFEIDPRSGLIS 246

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 247 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 306

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 307 DVRPHTVVLRVTAT 320



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     +V I A+D+D+G NA ITY +       
Sbjct: 596 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLL----EDN 650

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 651 LPQFRIDADSGAITLQATLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 709

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 710 QFVASHYTGLVSEDAPPFTSVLQISAT 736



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 464 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 520

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + G+   T  L      E+Y
Sbjct: 521 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGIGLVTLALPLDYKQERY 576

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + STV  I+ S
Sbjct: 577 FKLVLTASDRALHDHCHVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTVVVISAS 633



 Score = 45.1 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 276 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 333

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 334 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 391

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N  +P+F    + V+V E A +  +V  I
Sbjct: 392 VDI------NDHTPIFVSTPFQVSVLENAPLGHSVIHI 423



 Score = 45.1 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36  PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
           PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 800 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 856

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
           V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 857 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 914

Query: 151 RSPVFQQ-----NTYDVNVSE 166
            SPV        N Y  N S+
Sbjct: 915 NSPVLNNFQILFNNYVSNRSD 935


>gi|149726811|ref|XP_001502300.1| PREDICTED: protocadherin beta-1-like [Equus caballus]
          Length = 818

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 9/122 (7%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAE 85
           K GTA      + V + D+ND+ P+   ++   Q+    A   +V +  ATD D G N E
Sbjct: 222 KSGTA-----HIRVEVLDVNDHVPQFSRLVYRAQVPENSANGSLVAVVTATDLDEGSNKE 276

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           ITYS+   +   L  F+IDP++G +   G L   A E Y I +QATD GG S+ + V V 
Sbjct: 277 ITYSLAQNTEAILQTFQIDPQTGEVRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVE 336

Query: 144 VV 145
           VV
Sbjct: 337 VV 338


>gi|344265563|ref|XP_003404853.1| PREDICTED: protocadherin alpha-11-like [Loxodonta africana]
          Length = 814

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 9/189 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           +V K++LDR+     +    + A +      +  V L V++ D+NDN P        +++
Sbjct: 194 LVLKKSLDRE--KTPELNLLLTATDGGKPELTGTVQLLVSVLDVNDNDPEFDQSEYKVRL 251

Query: 62  QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
               A+   ++K+ ATD D GVN E+TY++  V   G   F +D  +G +   G L   E
Sbjct: 252 LENAAKETFVIKLNATDRDEGVNGEVTYTLISVKPNGRPLFTLDENNGEVRVNGTLDYEE 311

Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y I VQATD G    +   IV V ++   N  +P     +  + V E A  ++ +A 
Sbjct: 312 NKFYEIEVQATDKGNPPMAGHCIVWVEILDA-NDNAPEVTMTSLSLPVREDAQPSTVIAL 370

Query: 177 ITVSRLASG 185
           ++VS   SG
Sbjct: 371 VSVSDRDSG 379



 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIP----------PIQIQAGEA 66
            +FQV AR+         V+L V + D NDNAP L  P+ P          P+ + AG  
Sbjct: 530 LQFQVSARDSGFPPLGSNVTLQVFVLDENDNAPVLLPPVSPGVSGPVSELVPLSVGAGHV 589

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSI 124
              + K+ A D D G NA ++Y +   +      FR+   +G + T+  L   +  Q  +
Sbjct: 590 ---VAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVGLYTGEVSTSRALDEADVPQQRL 646

Query: 125 TVQATDTG 132
            V   D G
Sbjct: 647 LVLVKDHG 654


>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3-like [Ailuropoda melanoleuca]
          Length = 4091

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 942  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1001

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1002 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1060

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1061 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1105



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+       R   +  +  G+    P      + D ND++P        Q 
Sbjct: 400 LIRTEAALDRESMERHYLR---VTAQDHGSPRLSPHPXXXXVADRNDHSPVFE-----QA 451

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 452 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAASAAFEIDPRSGLIS 511

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 512 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 571

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 572 DVRPHTVVLRVTAT 585



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 729 LDRESVE--HYFFGVEARDHGIPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 785

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 786 VGTTVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 841

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y VNV+E   + STV  I+ S
Sbjct: 842 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVNVNEDRPVGSTVVVISAS 898



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E R     +V I A+D+D+G NA ITY +       
Sbjct: 861  INITDANTHRPVFQS-AHYSVNVNEDRPVGSTVVVISASDDDVGENARITYLL----EDN 915

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRI+  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 916  LPQFRINADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 974

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 975  QFVASHYTGLVSEDAPPFTSVLQISAT 1001



 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 12/139 (8%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    QA       A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 335 ANRHPQFPQYNYQALVPENEVAGTAVLRVAAQDPDAGEAGRLVYSLAALMNSRSLELFSI 394

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY- 160
           DP SG+I T   L   + E++ + V A D G            V   N  SPVF+Q  Y 
Sbjct: 395 DPLSGLIRTEAALDRESMERHYLRVTAQDHGSPRLSPHPXXXXVADRNDHSPVFEQAQYR 454

Query: 161 ---DVNVSEGASINSTVAT 176
                NV EG  I    AT
Sbjct: 455 ETLRENVEEGYPILQLRAT 473



 Score = 45.1 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 541 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 598

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 599 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 656

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N  +P+F    + V+V E A +  +V  I
Sbjct: 657 VDI------NDHTPIFVSTPFQVSVLENAPLGHSVIHI 688



 Score = 45.1 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1065 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1121

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1122 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1179

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1180 NSPVLNNFQILFNNYVSNRSD 1200


>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta]
 gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]
          Length = 3582

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGAEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAALDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAALDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            ++       ++++ A+D D+G+N  I Y +    +     F IDP SG I T   L   +
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKY-LLSDRDVEDGSFVIDPTSGTIRTNKGLDRES 1075

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               + +T  A D G     + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1076 VAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEI 1135



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGAEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
 gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
          Length = 3396

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 19/179 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEA- 66
           LDR+  +   FR  +IA +      S   +L VN+ D ND+ P          ++ G + 
Sbjct: 396 LDREVMDVHYFR--IIATDDSFPPRSGTSTLQVNVLDCNDHTPAFESEEFHANVREGTSV 453

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-------HKFRIDPRSGVIETTGKLIA- 118
              ++ I ATD D+G N EI YSI  VS   +       + FRI+ R+G I T G L   
Sbjct: 454 GSSVITIRATDQDIGKNGEIEYSIASVSGDNVTVGENADNLFRIEARTGTITTRGALDRE 513

Query: 119 -GEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
             E Y I V ATD        KS+   V V+V+   N   P F + TY V+VSE    N
Sbjct: 514 ISEMYVIQVMATDMAIPQSERKSTTATVFVNVL-DDNDNYPQFSERTYTVHVSEDQWTN 571



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          +++      IV+++A 
Sbjct: 628 YRLVIRAQDGGSPSRSNTTQLLVNVQDANDNAPRFYTTQFQEAVLESVPVGYNIVRVQAY 687

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D GVN+EI+Y I            ID R+G I TT  L   E+  Y   V A D G  
Sbjct: 688 DSDEGVNSEISYRIQDRDENS--PLAIDSRTGWIHTTSPLDREEKSRYVFQVVAIDGGIP 745

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            KS+ T V V+ +   N   P+F    Y+ +++E     + V T+T + L
Sbjct: 746 PKSASTSVVVT-IQDINDNDPIFNPKYYEASIAEDQPPGTPVTTVTATDL 794



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+  +  ++ FQV+A +      S   S+ V + DINDN P   +  P   +A  A  
Sbjct: 725 LDREEKS--RYVFQVVAIDGGIPPKSASTSVVVTIQDINDNDP---IFNPKYYEASIAED 779

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD  L  ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 780 QPPGTPVTTVTATD--LDEDSRLHYEITSGNTRG--RFSITSQNGRGLITIAQSLDYKQE 835

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++++TV ATD+G +S Q IV +++    N  +PVF+   Y  +V E A + +TV  +  
Sbjct: 836 QRFALTVSATDSGQRSDQAIVNINITDA-NNFAPVFENAPYTASVFEDAPVGTTVLMVFA 894

Query: 180 S 180
           S
Sbjct: 895 S 895



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + +N+ D N+ AP     P      +       ++ + A+DND+G+NA+ITYS+   S+ 
Sbjct: 856  VNINITDANNFAPVFENAPYTASVFEDAPVGTTVLMVFASDNDVGLNAQITYSLNEGSSN 915

Query: 97   GL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS--SQTIVEVSVVPGPN 149
            GL     F +  ++G I TT  L       + +TV A D+G  S    T VE+S+    N
Sbjct: 916  GLGSNEPFSVHVQTGAIVTTAALDRETTSTFLLTVTAKDSGNPSLADTTDVEISIT-DIN 974

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SP F    Y   ++E A I ++V  I+ +
Sbjct: 975  DNSPQFDVPLYQATIAEDAFIGTSVLQISAT 1005



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V+   LDR+      F   V A++    + +    + +++ DINDN+P+   +P  Q  
Sbjct: 932  IVTTAALDRE--TTSTFLLTVTAKDSGNPSLADTTDVEISITDINDNSPQFD-VPLYQAT 988

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--- 116
              E       +++I ATD+D+G+N  + + +    +     F IDP SGVI T   L   
Sbjct: 989  IAEDAFIGTSVLQISATDDDMGLNGRVKFML-SSKDVEDGSFVIDPSSGVIRTNKGLDRE 1047

Query: 117  -IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             IA   Y +   A D G  +  + VEV + +   N   P F  +   + V E + + S +
Sbjct: 1048 SIA--VYHLIAIAADRGTPTLSSSVEVQIRLNDINDSPPTFASDKLTMYVPENSPVGSAI 1105

Query: 175  ATI 177
              I
Sbjct: 1106 GEI 1108



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
            ++ + + LDR+  +   +    IA ++     S  V + + LNDIND+ P     +L M 
Sbjct: 1037 VIRTNKGLDRE--SIAVYHLIAIAADRGTPTLSSSVEVQIRLNDINDSPPTFASDKLTMY 1094

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
             P     G A   I +I A D D GVNA + YSI  +    L+ F +  R G
Sbjct: 1095 VPENSPVGSA---IGEIYAHDPDEGVNAIVHYSI--IGGDDLNAFSLVTRPG 1141


>gi|441611774|ref|XP_004088040.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3 [Nomascus leucogenys]
          Length = 4067

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 946  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1005

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1006 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1064

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1065 PLRTPVNIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1109



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 454 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 506

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 507 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 566

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 567 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 626

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 627 DVRPHTVVLRVTAT 640



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E RR    IV I A+D+D+G NA ITY +       
Sbjct: 865  INITDANTHRPVFQS-AHYSVSVNEDRRVGSTIVVISASDDDVGENARITYLL----EDN 919

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 920  LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 978

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 979  QFVASHYTGLVSEDAPPFTSVLQISAT 1005



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 414 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 473

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 474 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 528



 Score = 43.5 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 596 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 653

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 654 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 711

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N   P+F    + V+V E A +  +V  I
Sbjct: 712 VDI------NDHIPIFVSTPFQVSVLENAPLGHSVIHI 743



 Score = 42.7 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PV++ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1069 PVNIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1125

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1126 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1183

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1184 NSPVLNNFQILFNNYVSNRSD 1204


>gi|350594180|ref|XP_003359779.2| PREDICTED: cadherin-18-like, partial [Sus scrofa]
          Length = 716

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 36  IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 94

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 95  PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 150

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 151 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 209

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 210 GSAVGKIKANDADTG 224



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     +  
Sbjct: 148 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 203

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++TYSI +    G+     D   R G++     
Sbjct: 204 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKP 260

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 261 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEV 318

Query: 165 SEGASINSTVATI 177
            E A I + V T+
Sbjct: 319 YENAKIGTVVGTV 331


>gi|334325572|ref|XP_003340657.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-18-like [Monodelphis
           domestica]
          Length = 790

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPXEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V ++ +   N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNIT-LSDVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 284 GSAVGKIKANDADTG 298



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L+D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLSDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NA++ Y+I +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMKYTIINGDGIGVFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y ++V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDVTMLKIIV--GDVDEPPLFSMPSYVMDV 392

Query: 165 SEGASINSTVATI 177
            E   I + V T+
Sbjct: 393 HENEKIGTVVGTV 405


>gi|307200812|gb|EFN80865.1| Neural-cadherin [Harpegnathos saltator]
          Length = 1176

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)

Query: 39   LTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V + D+NDN P      M  P   +       ++K++ATD D GVN ++ YSI    N
Sbjct: 869  VVVFITDVNDNKPVFKDCGMYYPKVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPN 928

Query: 96   TGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                KF +D  +G +  T K+       G+  S+TV+ATD G  S + +   +V +   N
Sbjct: 929  QKGTKFTVDEETGQV-LTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVN 987

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P+F +  Y  NV + ASI + +  ++ S
Sbjct: 988  DNPPLFDRQRYVENVKQDASIGTNILRVSAS 1018



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 623 LAKELDFEDLRQPHIYSLIVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 680

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++ATD D GVNAEI Y +          F +D  +G+I    +L A 
Sbjct: 681 VDEDVSLGTNILRVKATDADSGVNAEIEYLVSD------DHFSVDS-NGIIVNNKQLDAD 733

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  S      V +     N   P F Q  Y  NV E A  N+ V 
Sbjct: 734 NNNAYYEFIVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 793

Query: 176 TITVS 180
           T+  S
Sbjct: 794 TVVAS 798



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 10/191 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAP---RLPMIPP 58
            V++ +  DR+  + GKF    +    QG  +   V S TV + D+NDN P   R   +  
Sbjct: 943  VLTNKVFDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN 1001

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLI 117
            ++ Q       I+++ A+D D   N  ITY++   +N  GL  F I P SG I    K +
Sbjct: 1002 VK-QDASIGTNILRVSASDEDADNNGAITYTLSSPNNDQGLEYFEIQPESGWI-VLKKPL 1059

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVA 175
              E Y +   A D G       VEV + V       PV+    Y  + + E  ++ + V 
Sbjct: 1060 DRETYKLEAMAQDKGFPPLSRTVEVQIDVVDRANNPPVWDHVVYGPIYIKENMAVGAKVV 1119

Query: 176  TITVSRLASGC 186
            ++        C
Sbjct: 1120 SVKARGYICTC 1130


>gi|307173873|gb|EFN64630.1| Neural-cadherin [Camponotus floridanus]
          Length = 1186

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)

Query: 39   LTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V + D+NDN P      M  P   +       ++K++ATD D GVN ++ YSI    N
Sbjct: 872  VVVFITDVNDNKPLFKDCGMYYPKVEEGAPNGSPVIKVQATDEDKGVNGQVKYSIVQQPN 931

Query: 96   TGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                KF +D  +G +  T K+       G+  S+TV+ATD G  S + +   +V +   N
Sbjct: 932  QKGTKFTVDEETGQV-LTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVN 990

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P+F +  Y  NV + ASI + +  ++ S
Sbjct: 991  DNPPLFDRQRYVENVKQDASIGTNILRVSAS 1021



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 626 LAKELDFEDLRQPHIYSLIVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 683

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++ATD D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 684 VDEDIPLGTNILKVKATDADSGANAEIEYLVSD------DHFSVDS-NGIIVNNKQLDAD 736

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  S      V +     N   P F Q  Y  NV E A  N+ V 
Sbjct: 737 NNNAYYEFIVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 796

Query: 176 TITVS 180
           T+  S
Sbjct: 797 TVVAS 801



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 12/195 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ- 60
            V++ +  DR+  + GKF    +    QG  +   V S TV + D+NDN P       ++ 
Sbjct: 946  VLTNKVFDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN 1004

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
              Q       I+++ A+D D   N  I YS+   +N   L  F I P SG I    K + 
Sbjct: 1005 VKQDASIGTNILRVSASDEDADNNGAIVYSLSSPNNEQNLEYFEIQPESGWI-VLKKPLD 1063

Query: 119  GEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYD-VNVSEGASINSTVAT 176
             + Y + V+A+D G    S  +     V   N + PV+  N Y  +++ E    N TV T
Sbjct: 1064 RDSYRLRVRASDRGMPFLSADVDVELDVVDRNNKPPVWDANVYGPIHIKE----NVTVGT 1119

Query: 177  ITVSRLASGCAIMNK 191
            I  S  A G +I  K
Sbjct: 1120 IVTSVKARGLSIREK 1134


>gi|291232409|ref|XP_002736151.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
            kowalevskii]
          Length = 2630

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 16/188 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQA 63
            LDR+  +  ++  Q +A ++ G        + ++L DINDNAP  P  P     P    A
Sbjct: 1153 LDRE--DQAQWILQAVAADEDGAGLDGFADIVISLRDINDNAPTFPNGPYMGTVPEHSLA 1210

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            G     +  ++  D + G NA+ TY I  +    G   F IDP +  I T    +  E  
Sbjct: 1211 GTYVMTMAAVDLDDPNEGDNAQCTYKIIENAEKDGEVIFAIDPVTAEITTLVDWLDREDV 1270

Query: 122  --YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              Y+I V+ATD GG   S+   +E+  +   N  +P F ++ Y    SE   + ++V T+
Sbjct: 1271 PVYNIVVEATDGGGLTGSATATIELEDI---NDNAPEFTEDKYYRAASESLLVGASVLTV 1327

Query: 178  TVSRLASG 185
            T   +  G
Sbjct: 1328 TALDMDVG 1335



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)

Query: 41  VNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           + +ND+N+N P  P      P   +       + ++ ATD D+G N ++ YSI       
Sbjct: 533 IQVNDVNNNRPVFPNCANYNPTVAENSPEGTTVTQVLATDADVGTNGQVEYSIVRRETAD 592

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
           L+ FRIDP  G+I TT +    E    Y I+V ATD        I ++++ +   N  +P
Sbjct: 593 LN-FRIDPNLGII-TTARRFDREVKRIYGISVAATDLAPDPLIGICQMNIEITDVNDNTP 650

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F+Q +Y+  + E   + ++   +      +G
Sbjct: 651 HFEQRSYEYQLREDTQVGTSFLRVAAQDADTG 682



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 33/187 (17%)

Query: 26   REKQGTAASVPV----SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKIEA 75
            R +   AA VP+    ++ +NL D+NDN P   +      +P + IQ       + ++ A
Sbjct: 836  RIRSLNAAQVPLPSYATVEINLIDVNDNVPLFSLPNYGASVPEMSIQG----TFVFQVTA 891

Query: 76   TDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
             D D G NAEITYSI     T   + FRI+ R+G I TT +     +  Y I V++ D G
Sbjct: 892  EDADTGSNAEITYSIIEDPETDDWNSFRINSRTGQIYTTQRFDRETKGSYLIEVRSQD-G 950

Query: 133  GKSSQTI--------------VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              S +T               V + VV   N  +P F    +   V E       + T+T
Sbjct: 951  APSDRTFDPDNPDAPNSDTAAVRI-VVSDINDNAPAFDSTEFYATVEEDRETGFAITTVT 1009

Query: 179  VSRLASG 185
             +    G
Sbjct: 1010 ATDEDEG 1016



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATD 77
            + ++     G   +   + T+ L DINDNAP        +  A E+      ++ + A D
Sbjct: 1273 YNIVVEATDGGGLTGSATATIELEDINDNAPEFTEDKYYR-AASESLLVGASVLTVTALD 1331

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFR---IDPRSGVIETTGKL----IAGEQYSITVQATD 130
             D+GVNA++ Y I    N G H +    I    G+I+    L    I   Q+++T++  D
Sbjct: 1332 MDVGVNAQLDYKITD-GNIGNHFYMYNDIANNVGIIKIQEMLDYEDITQRQFTLTLEVCD 1390

Query: 131  TG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 +++ ++ V      N   PVF  N Y  +V E AS+N+ + T+
Sbjct: 1391 PDFCDTAECLITVEDF---NDNPPVFDPNLYQASVYENASLNTILGTV 1435



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             + + + D+NDN P        + Q  E  +     +++ A D D G NAEI+YS+   
Sbjct: 636 CQMNIEITDVNDNTPHFEQ-RSYEYQLREDTQVGTSFLRVAAQDADTGYNAEISYSL--- 691

Query: 94  SNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             +    F ++  +G +       L   ++  + + ATD  G   Q  V +S+ +   N 
Sbjct: 692 --SDEEYFSVNNATGWVYVKNAIYLSQDDKIYLNLMATDQKGTGRQDTVPLSITISDINN 749

Query: 151 RSPVFQQNTYD-VNVSEGASINSTVATITVSRL 182
             PV+  +TY  +++ E A+  + VA +  + +
Sbjct: 750 EPPVWDASTYGPISLREDAATETVVARVKATSI 782



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 15/115 (13%)

Query: 69  QIVKIEATDNDLGVNAEITYSI----YHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYS 123
           ++V + ATD D G NA+++YSI    + +++ G     I P   +  E+T  L     Y+
Sbjct: 355 EVVTVLATDCDSGTNAQLSYSIDNNAFQINSLG----EIRPSVKLDYESTNSL-----YT 405

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           I   A D G  S      ++V +   N   P F QNTY   V+E A     VAT+
Sbjct: 406 IIATAKDHGSPSKTGTATINVRIKNYNDEPPRFSQNTYKYFVAENAPDGFQVATV 460



 Score = 38.9 bits (89), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 43   LNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            ++DINDNAP            +  E    I  + ATD D G N++I Y I   +  G+  
Sbjct: 976  VSDINDNAPAFDSTEFYATVEEDRETGFAITTVTATDEDEGANSQIRYQITSGNLGGV-- 1033

Query: 101  FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
            FR+ P  G IE    L   +   Y++T  A+D G   +  IV + VV   N   P FQ
Sbjct: 1034 FRVVPEVGRIEIAAPLDYEQTRSYALTFVASD-GLNENTAIVNIDVV-NVNDNPPEFQ 1089


>gi|291221993|ref|XP_002731003.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
          Length = 2057

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 25/191 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTA----ASVPVSLTVNLNDINDNAPRL----PMIPPIQ 60
           LDR+  +  ++   V A ++ G A     +VP+ + V   DINDN P      P+  PI 
Sbjct: 511 LDREVTD--EYHLFVTAADRNGDAQNLNTTVPIFIIVT--DINDNEPVFYDEQPL--PID 564

Query: 61  IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLI- 117
           I    E    + K++A DND G+N  + YSI      G H  F I+ RSGV+  +G L  
Sbjct: 565 IYENVELNTNLSKVQADDNDAGLNGRVLYSII----GGSHGDFSINKRSGVLYVSGILDR 620

Query: 118 -AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +   Y I + A DTG     S T+V + ++   N   PVF  + Y   ++E + I + V
Sbjct: 621 ESISSYVINISAYDTGNPILESYTVVTIDIL-DINDNGPVFSSDYYMAWINESSEIYTHV 679

Query: 175 ATITVSRLASG 185
             ++   +  G
Sbjct: 680 LNVSAEDIDQG 690



 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            ++L DINDN P    + P + QA E      ++ + ATD+D G N  + YSI     +  
Sbjct: 960  IHLTDINDNTPTFSPVEPCEEQAEEVAIGTTVLSVTATDDDEGENGAVQYSI-----SDT 1014

Query: 99   HKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
              F ID  +G I T  +L   +  +Y+  V ATD G     + + VS+ +   N   P F
Sbjct: 1015 ESFTIDKDTGDITTISRLDYEDVQEYTFNVTATDCGEPPLSSTMSVSICITDINDNVPQF 1074

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
                Y+ N+   +  N  V ++T S    G
Sbjct: 1075 LNTPYNSNIQSNSKKNKFVISVTASDADDG 1104



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 53/231 (22%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
            +V+   LDR+  +   + F V A++   +  +  V + VN+ DINDNAP   +    +  
Sbjct: 1235 IVTSTKLDRETTD--WYSFTVTAKDTITSKHNAYVPVMVNVMDINDNAPMFELSKYDENY 1292

Query: 61   IQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----------------- 100
            I  G+       I+ + A+D D G NAEI YSI    + G H+                 
Sbjct: 1293 IDEGDYTDNHAWILNVSASDGDTGTNAEILYSIVS-GDRGKHELLVSYCRVVDRSDSSEA 1351

Query: 101  ---------------------FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK-- 134
                                 F+I+  +G I + G +I  E    Y +TV A D G +  
Sbjct: 1352 VALLLIEHMPLDLALLSSERHFKINKTTGNIYSVG-VIDRETINTYYLTVMAEDMGSEAL 1410

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            S  T V ++ V   N  +P F Q+TY  +V E    ++ + T+  +    G
Sbjct: 1411 SGTTCVYIT-VSDVNDNAPQFNQSTYSGSVEENNRDDTAIVTVYATDKDEG 1460



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 31/191 (16%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG 64
           LDR+  +   + + V+      T   A  V   L + + D ND+ P          ++  
Sbjct: 397 LDRE--DRDVYHYAVVGYLTDSTKCLANPVAEELLIRVLDDNDHYPVFTHNTSTGYVREN 454

Query: 65  EARRQIV----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
            +  QIV    +I  TD D+G NA+I YS+   S  G  +F IDP +GVI TT +L  G 
Sbjct: 455 SSSAQIVSMVPQISTTDLDIGYNADIRYSL---SGEGSDQFEIDPETGVITTTDELPQGL 511

Query: 120 -----EQYSITVQATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYD-----VNVSE 166
                ++Y + V A D  G +   + T+    +V   N   PVF    YD     +++ E
Sbjct: 512 DREVTDEYHLFVTAADRNGDAQNLNTTVPIFIIVTDINDNEPVF----YDEQPLPIDIYE 567

Query: 167 GASINSTVATI 177
              +N+ ++ +
Sbjct: 568 NVELNTNLSKV 578



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            +DR+  N   +   V+A +    A S    + + ++D+NDNAP+            E  R
Sbjct: 1388 IDRETIN--TYYLTVMAEDMGSEALSGTTCVYITVSDVNDNAPQFNQ-STYSGSVEENNR 1444

Query: 69   Q---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG-VIETTGKLIAGEQ--- 121
                IV + ATD D G N  + YS+  VS      F +D  SG ++ T    I  E+   
Sbjct: 1445 DDTAIVTVYATDKDEGENKIVHYSL--VSG-AYDNFEVDRDSGDIMPTANANIDYEEVKN 1501

Query: 122  YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            Y++ VQA D+G    +S T V ++V+   N  +P F    Y+  V     + +T+  +  
Sbjct: 1502 YTLVVQAEDSGTPPLNSTTAVFIAVI-DVNDNTPYFMGEPYETEVVNTVKVGTTIYKVNA 1560

Query: 180  SRLASG 185
            S   SG
Sbjct: 1561 SDFDSG 1566



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 19/165 (11%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVK--IEATDNDLGVNAEI 86
           A+SV   L + ++D NDN+P          I   +    + ++   I + D D G+NA  
Sbjct: 733 ASSVVAELYIGVSDENDNSPIFAASQYDGWINENSDPGVKVVLDTPISSVDYDYGLNAS- 791

Query: 87  TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-------GEQYSITVQATDTGG---KSS 136
             ++Y +S  G  +F+ID ++GVI TT             ++Y++ V  +D  G    S 
Sbjct: 792 --TVYTLSGDGHEQFKIDNKTGVITTTDDESVLDLDREERDRYNLEVIVSDRDGVDDLSL 849

Query: 137 QTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +T V ++VV    N   P F Q+ YD  + E  +I   +  I+ +
Sbjct: 850 KTSVPLTVVLCDVNDNYPQFTQDEYDYEIPENTTIGHVIVVISTT 894



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 24/138 (17%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHV--- 93
           +T+++ DINDN P       +    ++ E    ++ + A D D G NAEITYSI      
Sbjct: 646 VTIDILDINDNGPVFSSDYYMAWINESSEIYTHVLNVSAEDIDQGHNAEITYSINSTDFV 705

Query: 94  --SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             SNT    + I    G +E T               TD    +S  + E+ + V   N 
Sbjct: 706 IDSNTEYESYDI--NYGFVEHT--------------VTDFHIDASSVVAELYIGVSDEND 749

Query: 151 RSPVFQQNTYDVNVSEGA 168
            SP+F  + YD  ++E +
Sbjct: 750 NSPIFAASQYDGWINENS 767



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 17/134 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIP-----PIQ 60
           LD D     ++  +VI  ++ G    +    V LTV L D+NDN P+          P  
Sbjct: 822 LDLDREERDRYNLEVIVSDRDGVDDLSLKTSVPLTVVLCDVNDNYPQFTQDEYDYEIPEN 881

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
              G     IV I  TD D+ VNA + Y+I    + G  KF I   SG +    +L    
Sbjct: 882 TTIGHV---IVVISTTDEDISVNA-VAYTIV-FGDDG--KFNIGRNSGELTVESELDREL 934

Query: 119 GEQYSITVQATDTG 132
             +Y + V A+D G
Sbjct: 935 KPRYVLNVSASDVG 948


>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans]
 gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]
          Length = 3463

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSP---TFEAEQF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|351703794|gb|EHB06713.1| Protocadherin-16 [Heterocephalus glaber]
          Length = 3197

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 418 YLVCVARQLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPTFDRQLYRP 475

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 476 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGTHT--HWFSIDPTSGIITTA 529

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      +  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 530 ASLDYELEPRPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 589

Query: 171 NSTVATITVSRLASG 185
            S    +T +   SG
Sbjct: 590 GSCFLQVTATDADSG 604



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2243 HYHLQLLAHDGPHKGQA-----NLTVLVEDVNDNAPTFSQSLYQVMLLEHTPPGSAILSV 2297

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++     F +DP +G + TT G L  G +      + ++A
Sbjct: 2298 SATDRDSGANGHIS---YHLASPA-EGFNVDPNNGTLFTTMGTLALGHEGPGVVDVVLEA 2353

Query: 129  TDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   +++Q  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2354 RDHGAPVRAAQATVHVQLK-DQNDHAPSFTLPFYRVAVSEDLPPGSTLLTL 2403



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2038 RLRLVLQAESGGAFAFSV-LTLTLQDTNDNAPRFLQPHYVAFLPESRPLEGPLLQVEADD 2096

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   I + ATD G  
Sbjct: 2097 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RIVLMATDRGSP 2154

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2155 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2209



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LV++ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 203 LVIAGE-LDRE--NRSHYMLQLEAYDGGLPPRKAQALLDVTLLDINDHAPAFNQSRYHAV 259

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F IDPR+G++     L
Sbjct: 260 VSETLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFTIDPRTGLLRLERPL 316

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 317 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGTPRVSEAAP 376

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 377 PGQLVARISVS 387



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ IT+++    
Sbjct: 878  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRAQDPDSGVNSRITFTLL--- 930

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +   G L  + G  + + ++A D G     +   + VV    G  
Sbjct: 931  AGGDGAFTVDPATGHVRLMGPLGPLGGPAHELELEARDGGSPPRTSHFRLRVVVQDLGTR 990

Query: 150  TRSPVFQQNTYDVNV 164
              +P F   +Y V++
Sbjct: 991  GLAPRFDSPSYRVDL 1005



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ D+ND AP         +  +       ++ + ATD DLG N ++TY      N 
Sbjct: 1534 LTVSVVDVNDEAPAFQQQDYSVLLRENSPPGTSLLTLRATDPDLGPNGQVTYGGVSGEN- 1592

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F +DP++GV+ T   L   EQ  I  TV A D G     T V V V +   N  +P
Sbjct: 1593 ----FSLDPKTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAP 1648

Query: 154  VFQQNTYDVNVSEG 167
             F      + V EG
Sbjct: 1649 TFGNAHLSLEVPEG 1662



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 24/187 (12%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIV 71
             PG     + AR+      +   ++ V L D ND+AP    +P  ++   E       ++
Sbjct: 2343 GPGVVDVVLEARDHGAPVRAAQATVHVQLKDQNDHAPSF-TLPFYRVAVSEDLPPGSTLL 2401

Query: 72   KIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPR-----SGV---IETTGKLIAGE-- 120
             +EATD D   ++A + YSI  +S      F+++PR      GV    +  G L+  E  
Sbjct: 2402 TLEATDADGSRIHATVDYSI--ISGNRGRVFQLEPRLAEAGEGVGPGPQALGCLVLLEPL 2459

Query: 121  ------QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  QY++TV A D G  S  + V V+V V   N   PVF Q +Y V V E   + + 
Sbjct: 2460 DFESLTQYNLTVAAADRGQPSRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAE 2519

Query: 174  VATITVS 180
            +  +  S
Sbjct: 2520 LLHVEAS 2526



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+      S  V +TV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1720 FQLRIEARDGGQPGLSATVLVTVTVLDANDHAPAFP-VPAYSVEVPEDAPAGTLLMQLQA 1778

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--T 131
             D D G N  +T   Y++       F ++P SG + T   L       Y+ +V A D   
Sbjct: 1779 HDPDAGANGHVT---YYLGTGTAGAFLLEPTSGELRTATALDREHCSSYAFSVSAVDGAA 1835

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1836 AGPLSTTVPVTITVRDVNDHAPTF 1859



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P +   +QI
Sbjct: 102 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQVRGALQI 148

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV--IETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++ R G         +I
Sbjct: 149 PEHTALGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGSDGAPVPELVI 205

Query: 118 AGE-------QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           AGE        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 206 AGELDRENRSHYMLQLEAYDGGLPPRKAQALLDVTLL-DINDHAPAFNQSRYHAVVSETL 264

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 265 APGSPVLQVFASDADAGA 282



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 8/151 (5%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLG 81
            V AR++        V++ V + D ND+AP        +++  G+  + +  + A+D D+G
Sbjct: 1620 VYARDRGSPPLLTHVTVRVAIEDENDHAPTFGNAHLSLEVPEGQDPQTLTTLRASDPDVG 1679

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQ 137
             N ++ Y I     +G   F +D  SG   T   L       + + ++A D G  G S+ 
Sbjct: 1680 ANGQLQYRIVDGDPSG--AFVLDLDSGEFGTRRPLDREVEPAFQLRIEARDGGQPGLSAT 1737

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             +V V+V+   N  +P F    Y V V E A
Sbjct: 1738 VLVTVTVLDA-NDHAPAFPVPAYSVEVPEDA 1767



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++   + S  V +TV + D+NDN       PP+  QA              
Sbjct: 2466 QYNLTVAAADRGQPSRSSAVPVTVTVLDVNDN-------PPVFTQASYRVTVPEDMPVGA 2518

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++ +EA+D D G +  + +++      GL  F +D  SG +     L    Q  + + V
Sbjct: 2519 ELLHVEASDADPGPHGLVRFTLSSGDPLGL--FELDESSGALRLAHPLDCETQARHQLVV 2576

Query: 127  QATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   VEV  V   N   P F  N    +++E     + V T+
Sbjct: 2577 QAADPAGTHFALAPVTVEVQDV---NDHGPAFPLNLLSTSLAENQPPGTLVTTL 2627



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 12/136 (8%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNA 84
            +Q + A+V VS+   LN  ND++PRL   P   +   E +     + ++ ATD D G N 
Sbjct: 1080 QQTSTATVRVSI---LNQ-NDHSPRLSEEPTF-LSVAENQPPGTSVGQVFATDRDSGPNG 1134

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
             +TYS+  +S      FRI P++G + T   L   +Q  + + VQ  D G     T   V
Sbjct: 1135 RLTYSLRQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSFQLLVQVQDGGSPPHSTTGTV 1193

Query: 143  SV-VPGPNTRSPVFQQ 157
             + V   N  SP F Q
Sbjct: 1194 HIAVLDLNDNSPTFLQ 1209


>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein
            [Acromyrmex echinatior]
          Length = 1179

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEA 66
            LDR+  N       V    K   +AS  + +T+   D+NDNAP+    +   +I +    
Sbjct: 868  LDRERENEYYLNISVFDLGKPQKSASKMLPITIL--DVNDNAPKFEKSLASFRISETALN 925

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               + +  ATD DLG NA +TYS+   +N     FR+DP +GV+   GKL    Q  Y +
Sbjct: 926  GTNVWRANATDADLGDNARVTYSLVTETN----DFRVDPVTGVLSVFGKLDRERQEIYEL 981

Query: 125  TVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++A D    +    S  +V V+ V   N  +P F  + Y+V + E   I + VA +
Sbjct: 982  RIRARDNSNDTPPLHSDALVRVT-VDDVNDNAPTFALSNYNVKIREDVPIWTVVAVV 1037



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 10/137 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ +  NLD +           I +   GT       + +N+ D NDN P     P +++
Sbjct: 491 MLYTAVNLDAEKKAFYTLTVSAIDQGNAGTRKQSSAKVKINVVDTNDNDPTFDQ-PEMEV 549

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              E   A   +V++ A D D G NA I+YSI    N     F ID  SG+++T   L  
Sbjct: 550 MIDENEPAGTSVVRVTAKDRDSGENAYISYSI---DNLKKVPFEIDHFSGIVKTKQVLDY 606

Query: 117 -IAGEQYSITVQATDTG 132
                +Y + V+A+D G
Sbjct: 607 ETMKREYLLHVRASDWG 623



 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 17/169 (10%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           G++ +    +T+ +  +N  AP + +  +P I   +      IV++   D D GV+ +I 
Sbjct: 301 GSSRASTAKVTIRVRQVNLYAPEIYVHQLPDIVENSNADIYAIVRV--IDRDDGVHGQIA 358

Query: 88  YSIYHVSNTGLHKFRIDP----RSG-----VIETTGKLIAGEQYSITVQATDTG--GKSS 136
            S+  V       FR+ P    RSG     V+    +  A + Y++T++A D G   + S
Sbjct: 359 -SLDIVGGDPAGHFRVRPAGGSRSGEYNIEVLHLLDRETALQGYNLTLRAMDRGVPQRYS 417

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              V V +V   N  +PVF +  Y+V V E A IN+ +  + V+    G
Sbjct: 418 YKFVPVHLV-DVNDNAPVFSREIYEVKVPETAPINTPIIRLKVTDADEG 465



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ ND+N      P+  PI+ +          R I+++ A D DLG N EI YS    ++
Sbjct: 206 LDTNDLN------PLFYPIEYETTVTEDTPLHRSILRVIAEDADLGRNGEIYYSFAEETD 259

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
               +F + P SGVI  T  L   E+  + + V A D G 
Sbjct: 260 ----QFAVHPVSGVITLTRPLRYAERAIHELVVLAKDRGA 295


>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
 gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
          Length = 5150

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A +    L +++ND+ND+ P         +  +    
Sbjct: 452 LDRE--EIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 509

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F +DP +G+I TTG L     +   +
Sbjct: 510 GSFVASITATDEDTGVNAQVHYDI--LSGNELKWFAMDPLTGLIVTTGALDREIRDTVEL 567

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ A D G   K + T ++V +V   N  +P F Q   +V + E A   + VA +T +
Sbjct: 568 SISARDGGPNPKFAYTQLKV-IVLDENDEAPQFSQREQNVTLGEDAPPQTIVALMTAT 624



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            +V  + LDR+  +  + R +V +   Q T A      T+ ++D NDN P     +    I
Sbjct: 1876 LVLNDTLDRETKSKYELRIRV-SDGVQYTEAYA----TIQVSDTNDNPPLFEDTVYSFDI 1930

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ +I A D DLG NA+++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1931 PENAQRGYQVGQIVARDADLGQNAQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1988

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D G  S  T + V   V   N  +P+F   +Y   V E   + + V T+
Sbjct: 1989 VQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPLATEVVTV 2048

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 2049 SAKDIDSG 2056



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            + ++  LDR+    G + F V A ++     +   S+ ++L D NDN P+   +  + + 
Sbjct: 2864 IYTRMRLDRE--EIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLFSLNVT 2921

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +  E    ++++ ++D DLG NA  +YS     N G  KFRIDP+SG I   G L   +Q
Sbjct: 2922 ENTEIGSFVIRVTSSDLDLGANANASYSF--SENPG-EKFRIDPQSGNITVAGHLDREQQ 2978

Query: 122  --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              Y + V A+D G   ++T + ++ +   N  +P F+ + Y  +  E
Sbjct: 2979 DEYILKVVASD-GAWRAETPITIT-IQDQNDNAPEFEHSFYSFSFPE 3023



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 11/149 (7%)

Query: 45   DINDNAPRLPMI----PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDNAP   +     P I +    A  Q + +    D D G+N+ I+YS+   +N    
Sbjct: 933  DLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGMNSRISYSL---TNNPNQ 989

Query: 100  KFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +FRI P +GV+     + A  G Q  + + ATD G    S  +    ++   N  +PVF 
Sbjct: 990  QFRIGPVTGVLYLQRPIRAEPGSQIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFD 1049

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASG 185
              +Y+ ++ E   +N+    +  + +  G
Sbjct: 1050 HTSYETSLPETTKVNTRFFALAATDIDLG 1078



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPR--------- 52
           + ++  LDR+     ++   VIAR++   T  S   ++ +N+ D+NDN P+         
Sbjct: 659 LTTRRPLDRE--KMSRYEIPVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYS 716

Query: 53  LPMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
           L     I+++   E  R ++ + A+D D G NA I Y +    + G   F++D RSG + 
Sbjct: 717 LTDDDAIKLREEVEKERILLHVTASDKDDGDNALIEYRL---ESGGEGLFQLDARSGALS 773

Query: 112 TTGKLIAG----EQYSITVQATDTGGKSSQ--TIVEV 142
             G   A       Y + V A D G + SQ   IVE+
Sbjct: 774 LRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEI 810



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            R P    + R + +A +KQ   +S  V +T+ + D+ND  P         I    A   +
Sbjct: 2125 RSPRKYQQTRQEFLAHQKQQRLSST-VKVTILIKDVNDEVPVFVSANETAIMENVAINTV 2183

Query: 71   V-KIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AGEQY 122
            V  ++A DND G N  I Y +    +  + +     F ++P  G +     L       Y
Sbjct: 2184 VIAVKAVDNDEGRNGYIDYLMKEARDEDIGQSDPLPFSLNPTDGQLRVVDALDRELRSSY 2243

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             + + A D G     T  ++ + +   N  SPVF    Y  +V+E ASI + V  ++ + 
Sbjct: 2244 LLNITARDRGEPPQATETQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATD 2303

Query: 182  LASGC 186
            +  G 
Sbjct: 2304 VDEGA 2308



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT++++D+NDN P+       +  P +I  GE    +    A D D G NA + Y++ 
Sbjct: 2579 VNLTISVSDVNDNIPKFDSTTYNVAVPERISQGEF---VFGARALDLDDGENAVVHYTL- 2634

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
              S    H F I+ ++GV+ T  +L    +      Y+I + A D G +   +  E++V+
Sbjct: 2635 --SGRDQHYFDINTKTGVVSTKLELRTKTKSPDDLTYTIVISAMDQGEQPLTSKAELTVI 2692

Query: 146  PGPNTRSPVF 155
              P    P F
Sbjct: 2693 LRPPELFPTF 2702



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 32/136 (23%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------------RL 53
           NLDR+  + G ++  + AR+         + + V + D+NDN P               L
Sbjct: 227 NLDRE--SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETAL 284

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
           P  P            +V + A+DNDLG N++ITY +        H+F ++P +GVI  T
Sbjct: 285 PGTP------------VVTVMASDNDLGDNSKITYYLAETE----HQFTVNPETGVISNT 328

Query: 114 GKLIAGEQYSITVQAT 129
            ++   +Q ++   A+
Sbjct: 329 ERVNCPQQTNVKNSAS 344



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSI 90
           + P+ + + + D+NDN+P  P  P I I   E+     ++    ATD D+G N  +T   
Sbjct: 137 TYPIEVRIKVLDVNDNSPEFPE-PSIAISFSESATSGTRLLLDAATDADVGENG-VTDQY 194

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ETTG L    +  Y + + A D G       +
Sbjct: 195 EIVAGNVDNKFRLATTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYL 254

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y+V+++E A   + V T+  S
Sbjct: 255 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 295



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 19/137 (13%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVNAEITYSIYHVS 94
            V + DINDN P    +  +Q      R        ++  +ATD D G+NA++ +++    
Sbjct: 2478 VEVQDINDNDP----VFELQSYHATVRENLPAGTHVLTPKATDKDEGLNAKLRFNLL--- 2530

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---TGGKSSQTIVEVSVVPGPN 149
               +H+F ID  +G I T   L   E   Y +T+ A D   T  ++S   + +S V   N
Sbjct: 2531 GEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTIS-VSDVN 2589

Query: 150  TRSPVFQQNTYDVNVSE 166
               P F   TY+V V E
Sbjct: 2590 DNIPKFDSTTYNVAVPE 2606



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 23/185 (12%)

Query: 19   FRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQI 70
            FR  V+A ++   +    S    +TV + DINDNAP        ++PP    +  +   +
Sbjct: 1563 FRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAV 1622

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT-GKLIAGE-QYSITVQ 127
            +++ A D D   N  +TY I     +G  + F++   +GV+  T G     E +Y +T++
Sbjct: 1623 MQVHAKDADSSSNGLVTYEIV----SGPQELFKLQRNTGVVTFTPGPQFKQEVRYQLTLK 1678

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
            ATD   +S +   EV +        G  +  P F+Q + +  +V E   I +++ T+T +
Sbjct: 1679 ATDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKHSGSVYENEPIGTSILTVT-A 1737

Query: 181  RLASG 185
             LAS 
Sbjct: 1738 HLASA 1742



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
            +N+ D ++N P+      + P+   A   +R IV++ A D  DLG N E+ YS+  V++ 
Sbjct: 3111 INIVDAHNNPPKFEQEEYLAPLPQDAVRGQR-IVRVHANDKQDLGTN-EMDYSL--VTSN 3166

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
                F I    G I      ++    +Y + V+ATD G   +S +T V + VV G N ++
Sbjct: 3167 LSSIFTIGRHDGWITLVRPIQVPPNTRYELVVRATDRGVPPQSDETRV-IIVVTGQNLKA 3225

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F  N+Y V V E   + S + T+
Sbjct: 3226 PGFSVNSYQVIVPENEPVGSIILTV 3250



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 20/160 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++     +    L + + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2243 YLLNITARDRGEPPQATETQLLIRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2299

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             ATD D G N  I YSI  V     H F I   +GV+     L      +YS+TV+A D 
Sbjct: 2300 SATDVDEGANGRIRYSI--VLGDQNHDFSISEDTGVVRVAKNLNYERLARYSLTVRAEDC 2357

Query: 132  -----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                  G +++  + +  +   N   P F  + Y   V E
Sbjct: 2358 ALENPAGDTAELTINILDI---NDNRPTFLDSPYLARVME 2394



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 39/164 (23%)

Query: 37   VSLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            V + +++ D NDNAP+         IP    +   A   + K+ A D D+G NAE+++++
Sbjct: 1136 VPVVIHVIDENDNAPQFTNSTFTFSIP----ENAPADTFVGKLTAVDRDIGRNAELSFTL 1191

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKL------------------------IAGEQYSITV 126
                ++    F ID R+G I+T                            +AG    +  
Sbjct: 1192 ----SSQTQDFTIDTRNGFIKTLRPFDREALVKVSRSAEAGGEDASLRGSVAGNYMLLEA 1247

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
              +D G    Q  V+V V V   N  +P F +  Y V +SEGAS
Sbjct: 1248 TVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGAS 1291



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 10/153 (6%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  + A+D D G N  +   IY + N 
Sbjct: 2795 ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVRASDRDSGDNGNV---IYRLQND 2851

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I T  +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2852 FDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPP 2910

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             F +  + +NV+E   I S V  +T S L  G 
Sbjct: 2911 KFTR-LFSLNVTENTEIGSFVIRVTSSDLDLGA 2942



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 7/153 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+T+ + D NDNAP           ++      ++++  A+D D GVN+++ +SI   + 
Sbjct: 1368 SVTIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSI--SAG 1425

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                 F ID  +G +     L   +   Y++ + A+D G  S  T V  +V V   N   
Sbjct: 1426 NRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNP 1485

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P+F        + EG  + + + T+T     SG
Sbjct: 1486 PIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSG 1518



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +   + ATD DLG N  I+Y I  +       F + P  G +     L   E+  Y++TV
Sbjct: 1066 RFFALAATDIDLGDNGRISYEI--IEGNTERMFGVFP-DGFLFVRAPLDREERDYYALTV 1122

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               D G  S  ++V V + V   N  +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1123 SCQDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1175


>gi|281363131|ref|NP_001163113.1| starry night, isoform B [Drosophila melanogaster]
 gi|386767714|ref|NP_001246257.1| starry night, isoform D [Drosophila melanogaster]
 gi|272432431|gb|ACZ94388.1| starry night, isoform B [Drosophila melanogaster]
 gi|383302401|gb|AFH08011.1| starry night, isoform D [Drosophila melanogaster]
          Length = 3574

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|338729309|ref|XP_003365866.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Equus
           caballus]
          Length = 1026

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I +   E      Q+ KI ATD D G NAEI+Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL----- 505

Query: 96  TGLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            G+    +F +D R+G++    KL     E+YS TV A D G     T   V V V   N
Sbjct: 506 -GIDAPSEFNLDRRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQN 564

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SP+F  N Y+  V E    + TV  ITV+
Sbjct: 565 DNSPIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++P      
Sbjct: 624 VIQPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VVPSSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPGTVVFTVVAVDNDTGMNAELRYSIVGGNTKGL--FIIDQTTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VSDLGLHRLVVKAKDLGQPDS 761



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++      +   ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDVND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKE-NEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGTSVTQLHATDADIGENAKIQFYFSNLVSNIAKRLFHLNTTTGLITIKEPLD 316

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPNHKLLVLASDGGLMPARAMVLVNVTDINDNVPSIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK----GQSI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + R PVF++N  +V++ E A + ++V  +
Sbjct: 241 DTNDNR-PVFKENEIEVSIPENAPVGTSVTQL 271


>gi|156383976|ref|XP_001633108.1| predicted protein [Nematostella vectensis]
 gi|156220173|gb|EDO41045.1| predicted protein [Nematostella vectensis]
          Length = 4639

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 1503 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAAG 1561

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 1562 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 1619

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A+I++ VAT+  S
Sbjct: 1620 NPPVIQDAVIRVSLSETAAIDTPVATVIAS 1649



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 3838 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAAG 3896

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 3897 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 3954

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A+I++ VAT+  S
Sbjct: 3955 NPPVIQDAVIRVSLSETAAIDTPVATVIAS 3984



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 1200 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAAG 1258

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 1259 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 1316

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A I++ VAT+  S
Sbjct: 1317 NPPVIQDAVIRVSLSETAEIDTPVATVIAS 1346



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 1979 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAAG 2037

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 2038 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 2095

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A I++ VAT+  S
Sbjct: 2096 NPPVIQDAVIRVSLSETAEIDTPVATVIAS 2125



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 897  VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAVG 955

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 956  NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 1013

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A I++ VAT+  S
Sbjct: 1014 NPPVIQDAVIQVSLSETAEIDTPVATVIAS 1043



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 2977 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAVG 3035

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 3036 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 3093

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A I++ VAT+  S
Sbjct: 3094 NPPVIQDAVIQVSLSETAEIDTPVATVIAS 3123



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 3535 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAVG 3593

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
            +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 3594 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 3651

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PV Q     V++SE A I++ VAT+  S
Sbjct: 3652 NPPVIQDAVIQVSLSETAEIDTPVATVIAS 3681



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSN 95
            +TVN+ DIND  P     P   +   E  R     + + ATD+D G N+ +TYSI   + 
Sbjct: 4143 VTVNVLDINDETPSFQS-PSFNVSVNEIERLGTVFLTVSATDSDAGANSALTYSIAAGNE 4201

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNTRS 152
             G+  F I+ ++  I    +L     + Y +TV A D G  S      V +  G  N   
Sbjct: 4202 EGV--FSINNKTAAISVAKQLDRETRDLYMLTVMAQDGGEPSLNRTAAVPIQVGDANDNP 4259

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVS 180
            PV Q     V++SE A+I++ VAT+  S
Sbjct: 4260 PVIQDAVIRVSLSETAAIDTPVATVIAS 4287



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 9/136 (6%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
           V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 655 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAAG 713

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
           +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 714 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 771

Query: 151 RSPVFQQNTYDVNVSE 166
             PV Q     V++SE
Sbjct: 772 NPPVIQDAVIRVSLSE 787



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 974  KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETA 1031

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
            E    +  + A+D D+G N  + YSI     +G H  FRI D  SG I   G L   ++ 
Sbjct: 1032 EIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFRIKDSSSGAISLAGMLSYNQRN 1087

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 1088 NYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 1129



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 3612 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETA 3669

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
            E    +  + A+D D+G N  + YSI     +G H  FRI D  SG I   G L   ++ 
Sbjct: 3670 EIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFRIKDSSSGAISLAGMLSYNQRN 3725

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 3726 NYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 3767



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 15/188 (7%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +   +   V+A++    + +   ++ + + D NDN P +   +I     +  
Sbjct: 4218 KQLDRETRD--LYMLTVMAQDGGEPSLNRTAAVPIQVGDANDNPPVIQDAVIRVSLSETA 4275

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G+L   ++ 
Sbjct: 4276 AIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISVAGRLSYKQRN 4331

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTR-SPVFQQNTYDVNVSEGASINSTVATI 177
             YS+ V+ TD G  +  S+ IV + V P    R +PVF    Y   V +  S +  V T+
Sbjct: 4332 NYSVVVKVTDGGSLALESRAIVLIDVTPTTENRNAPVFASVQYIGGVYKDTSFDFPVLTV 4391

Query: 178  TVSRLASG 185
              +   +G
Sbjct: 4392 VATDSDTG 4399



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 1277 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETA 1334

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
            E    +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++ 
Sbjct: 1335 EIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQRN 1390

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 1391 NYIVVVNVTDGGSPALKSRAMVVIDVKPKP-------RNLTYDVSVLEG 1432



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 3054 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETA 3111

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI-DPRSGVIETTGKLIAGEQ-- 121
            E    +  + A+D D+G N  + YSI    +  L  F+I D  SG I   G L   ++  
Sbjct: 3112 EIDTPVATVIASDKDIGANGRLMYSI---ESGALGHFQIKDWSSGAISLAGMLSYNQRNN 3168

Query: 122  YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            Y + V  TD G  +  S+ IV + V P P       +  T+DV+V EG
Sbjct: 3169 YIVVVNVTDGGSPALKSRAIVVIDVTPKP-------RNLTHDVSVLEG 3209



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 1580 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETA 1637

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++ 
Sbjct: 1638 AIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQRN 1693

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 1694 NYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 1735



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 1753 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETA 1810

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++ 
Sbjct: 1811 AIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQRN 1866

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 1867 NYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 1908



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            + LDR+  +  ++   V+A++      +   ++ + + D NDN P +   +I     +  
Sbjct: 3915 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETA 3972

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ- 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++ 
Sbjct: 3973 AIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQRN 4028

Query: 122  -YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 4029 NYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 4070



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 17/112 (15%)

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAG 119
            Q  E    +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   
Sbjct: 3364 QTAEIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYN 3419

Query: 120  EQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            ++  Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 3420 QRNNYIVVVNVTDGGSPALKSRAMVVIDVKPKP-------RNLTYDVSVLEG 3464



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 17/113 (15%)

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIA 118
            ++  E    +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L  
Sbjct: 2805 VKTAEIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSY 2860

Query: 119  GEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             ++  Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 2861 NQRNNYIVVVNVTDGGSPALKSRAMVVIDVKPKP-------RNLTYDVSVLEG 2906



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 46  INDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI-D 104
           IN +   L +   +  +  E    +  + A+D D+G N  + YSI    +  L  F+I D
Sbjct: 468 INSSTGDLIVNKTLDRETAEIDTPVATVIASDKDIGANGRLMYSI---ESGALGHFQIKD 524

Query: 105 PRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTY 160
             SG I   G L   ++  Y + V  TD G  +  S+ IV + V P P       +  T+
Sbjct: 525 WSSGAISLAGMLSYNQRNNYIVVVNVTDGGSPALKSRAIVVIDVTPKP-------RNLTH 577

Query: 161 DVNVSEG 167
           DV+V EG
Sbjct: 578 DVSVLEG 584



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 16/116 (13%)

Query: 2    LVVSKENLDRDPPN--PGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPRLPMIP 57
            L+V+K  LDR+      G  RF+V A +   QG+  ++     + + DINDNAP      
Sbjct: 2473 LIVNK-TLDREAMGNGLGSLRFEVYASDSSSQGSLTAI-----LTITDINDNAPAFQNT- 2525

Query: 58   PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
            P+ +   E R     +  + ATD D   NA IT+ I  VS      F ID  +G I
Sbjct: 2526 PLTVSCSENRPIGLTVATLTATDADATTNAIITFVI--VSGNEGEAFSIDKVTGDI 2579



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
            V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 3280 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALTYSIAAG 3338

Query: 94   SNTGL 98
            +  GL
Sbjct: 3339 NEEGL 3343


>gi|119585318|gb|EAW64914.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog,
           Drosophila) [Homo sapiens]
          Length = 3037

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 652 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 711

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
           D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 712 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 770

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 771 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 815



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 109 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 161

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 162 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 221

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 222 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 281

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 282 DVRPHTVVLRVTAT 295



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 571 INITDANTHRPVFQS-AHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLL----EDN 625

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 626 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 684

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 685 QFVASHYTGLVSEDAPPFTSVLQISAT 711



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 69  VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 128

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 129 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 183



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 439 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 495

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 496 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 551

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 552 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPMGSTIVVISAS 608



 Score = 43.9 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36  PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
           PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 775 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 831

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
           V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 832 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 889

Query: 151 RSPVFQQ-----NTYDVNVSE 166
            SPV        N Y  N S+
Sbjct: 890 NSPVLNNFQILFNNYVSNRSD 910



 Score = 43.1 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 251 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 308

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 309 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 366

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N   P+F    + V+V E A +  +V  I
Sbjct: 367 VDI------NDHIPIFVSTPFQVSVLENAPLGHSVIHI 398


>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
 gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
          Length = 4689

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ DINDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 3258 TVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 3317

Query: 96   TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 3318 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISIL-DINDN 3374

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SP F QN Y +NV+E   + S +  +
Sbjct: 3375 SPTFLQNLYRINVNEDIFVGSKILDV 3400



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-Q 62
            ++  LDR+  N  +   +V   +      S    + V++ DINDN+P     +  +Q+  
Sbjct: 1253 TERKLDRE--NQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPS 1310

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
            +    + I ++ A D+D G N  ITYSI   S  G +KFRID + G I     L +  ++
Sbjct: 1311 SATVNQSIFQVHAIDSDSGENGRITYSIK--SGKGKNKFRIDSQRGHIHIAKPLDSDNEF 1368

Query: 123  SITVQATDTG-GKSSQT 138
             I ++A D G  K SQT
Sbjct: 1369 EIHIKAEDNGIPKKSQT 1385



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
            KF F  I     GT    P+S    + +++ DINDN+P   +    +I   E      +I
Sbjct: 3342 KFYFLTIQAIDGGTP---PLSNNAYVNISILDINDNSPTF-LQNLYRINVNEDIFVGSKI 3397

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            + ++ATD D  VN  +TY+I    N G  +F IDP++G I  +  L       Y++ +QA
Sbjct: 3398 LDVKATDEDSDVNGLVTYNIERGDNIG--QFSIDPKNGTISVSRPLDRETISHYTLEIQA 3455

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G       V +++ +   N  +P+F  + Y V + E   +     T  +S
Sbjct: 3456 CDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKIS 3508



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20   RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            +++++A  + G   +      + + +NDINDN P   M      +P    +  +    I 
Sbjct: 3134 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVP----EDAQLNTLIT 3189

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
            K+ A D D GVN +I YS+   ++     F+I   +G+I     L       +++TV+A 
Sbjct: 3190 KVHAMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLHKSLDRETISLFNLTVKAE 3246

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G     +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 3247 DCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 3303



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
            LDR+  +   +   + A++      S    + V ++D+NDNAP   +   I +++    R
Sbjct: 938  LDREKQD--NYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPR 995

Query: 68   RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
              ++  IEA D D+G NAEI +S+   +      FRID  +G I T G L    +  +++
Sbjct: 996  GTVLAVIEAVDEDIGPNAEIQFSLKEETQDE-ELFRIDKHTGAIRTQGYLDYENKQVHNL 1054

Query: 125  TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             V A D G     S  +IV + +    N  +P F    Y+  V E     + V  +T
Sbjct: 1055 IVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVT 1111



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+ P     +I     ++     ++ ++ A D D G NAEI YSI    N 
Sbjct: 1598 IIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSII-TGNV 1656

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G   F IDP  G+I   G L     ++Y + V+A D G    SSQ  V + V    N   
Sbjct: 1657 G-SVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSEND-P 1714

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F  N   + + E   I + V  +T
Sbjct: 1715 PKFPTNNIAIEIFENLPIGTFVTQVT 1740



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%)

Query: 32   AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNA 84
             A VP+S    + + + + NDN P L   P   +   EA     +I+ ++A D D+    
Sbjct: 1168 CAIVPLSNCVEVYIQVENENDNIP-LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQ 1226

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTI 139
             ITY+I  VS   +  F ID ++GVI+TT + +  E   ++ + V  +D G    SS + 
Sbjct: 1227 TITYNI--VSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSR 1284

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + VSV+   N  SP F Q  Y V V   A++N ++  +
Sbjct: 1285 IVVSVL-DINDNSPEFDQRVYKVQVPSSATVNQSIFQV 1321



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ + + LD +  +        I +   G+       + +++ D+NDN P    +  + I
Sbjct: 456 MLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKV-I 514

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              E   A   +VK+ A D D G N+ I+YSI   +N     F ID  SG+++TT  L  
Sbjct: 515 SINENNLAGSFVVKLTAKDRDSGENSYISYSI---ANLNAVPFEIDHFSGIVKTTSLLDF 571

Query: 117 -IAGEQYSITVQATDTG-GKSSQTIVEVS-VVPGPNTRSPVFQQ-NTY 160
                 Y + ++A+D G     QT +++S VV   N   P F++ N Y
Sbjct: 572 ETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCY 619



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           +Q GE    +  IEA D DLG N ++ ++I       +  FRIDP  G ++  G L    
Sbjct: 785 VQLGET---VAWIEAKDRDLGYNGKLVFAISDGDYDSV--FRIDPDRGELQIIGYLDRER 839

Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           Q  Y + +   D G   KS+  ++ ++++   + R PV Q+      ++E A I + V  
Sbjct: 840 QNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNR-PVIQKTLATFRLTESARIGTVVHC 898

Query: 177 ITVSRLASG 185
           +  +   SG
Sbjct: 899 LHATDADSG 907



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 18   KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKI 73
            K+   V+  +  G+ + S   ++ + + D+NDNAP    + P    ++     R Q V +
Sbjct: 2413 KYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAP--CFVEPSYFTKVSVAAVRGQFVAL 2470

Query: 74   -EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             +A D D+     + Y I  V    L  + ID  +GVI     L   ++ S  +  + + 
Sbjct: 2471 PKAYDKDISDTDSLEYKI--VYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSD 2528

Query: 133  G-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  ++   +++S++P  N  SP+F Q+TY+  V E       + T+  S
Sbjct: 2529 GVHTAYARLKISLLP-ENVYSPLFDQSTYEAQVPENLLHGHNIITVKAS 2576



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 20/182 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           L  D   P +F ++ +  + +  + ++P+  T  + +++     +P   PI +       
Sbjct: 371 LAEDLGTPRRFAYKSVPIQIKPESKNIPI-FTQEIYEVS-----IPETAPINMP------ 418

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ +D DLG NA +   I  V      +FRI+P SG++ T  +L A ++  Y++TV
Sbjct: 419 -VIRLKVSDPDLGKNALVYLEI--VGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTV 475

Query: 127 QATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            A D    G   Q+  +V + V   N   P+F+     ++++E     S V  +T     
Sbjct: 476 SAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRD 535

Query: 184 SG 185
           SG
Sbjct: 536 SG 537



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 10/140 (7%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
            V L+V++ D+ND  P +   I  + I +      QI+KI ATDND G NA+++Y I  + 
Sbjct: 2325 VVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESIN 2384

Query: 94   --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +N+ L  F ID   G   ++T       + + I V   D G  S  +   V + V   
Sbjct: 2385 GQNNSEL--FYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDL 2442

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N  +P F + +Y   VS  A
Sbjct: 2443 NDNAPCFVEPSYFTKVSVAA 2462



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 9    LDRDPPNPGKFRFQV--IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            LDR+  N       V  +    + T+  +P+++     D+NDN P +            A
Sbjct: 835  LDRERQNEYVLNITVYDLGNPTKSTSKMLPITIL----DVNDNRPVIQKTLATFRLTESA 890

Query: 67   RRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
            R   V   + ATD D G+NA++TY++    +     F ++  +G +     L   +Q  Y
Sbjct: 891  RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCLRLNKPLDREKQDNY 946

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ + A D G    SS+ +V V +V   N  +PVF    Y   V E     + +A I
Sbjct: 947  ALHITAKDGGSPVLSSEALVYV-LVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVI 1002



 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 13/86 (15%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
           + I+K+ A D DLG+N EI YS+   S      F I P +G I    +L   E   + +T
Sbjct: 200 QSILKVTADDADLGINGEIYYSLLMDS----EYFAIHPTTGEITLLQQLQYAENSHFELT 255

Query: 126 VQATDTGG-------KSSQTIVEVSV 144
           V A D G        ++S+T V +SV
Sbjct: 256 VVAYDRGSWVNHQNHQASKTKVSISV 281



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 22   QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
            Q + RE+Q           ++VPV      + +++ D NDN P+           +  E 
Sbjct: 2816 QTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 2875

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               +VK+ ATD D G N +I Y +   +    + F ID  SG I     L      +Y+ 
Sbjct: 2876 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 2935

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V A D G       V V++ +   N  +PVF+     ++V E A
Sbjct: 2936 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENA 2980



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+ +++ D+NDN P    +P    + I   +    I++++A D D   N E+ Y +    
Sbjct: 2125 SIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKK-G 2182

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
            N  L  F++D +SG + +  + + G    Y +TV A D      SS+  ++V V+   + 
Sbjct: 2183 NGEL--FKLDRKSGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVI---DR 2236

Query: 151  RSPVFQQNTYDVNVSEGASINSTVA 175
              PVF++  Y V+V E   + S ++
Sbjct: 2237 SMPVFEKQFYTVSVKEDVEMYSALS 2261



 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSIT 125
              I+ ++A+D D G  A + Y I  VS      F ID  +GVI  + T      ++Y + 
Sbjct: 2568 HNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQTTGVITSKVTFDREKKDEYVVL 2625

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ +D GGK     ++V VV   N   P F    Y + VS     N T+ T+
Sbjct: 2626 LKVSDGGGKFGFASLKVIVVD-VNDNVPYFLLKEYKMVVSTTVEANQTILTV 2676


>gi|402576648|gb|EJW70606.1| hypothetical protein WUBG_18485, partial [Wuchereria bancrofti]
          Length = 136

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 45  DINDNAPRLPM-IPPIQIQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           DINDN PR    I    + A G   R ++KI ATDND G NA+I+Y +  +S+   + F 
Sbjct: 2   DINDNPPRFSSSIYTASVSANGIIDRPVIKIYATDNDTGKNAQISYHLVSISDGAYNNFW 61

Query: 103 IDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD 161
            D ++  +   G L AGE+Y I  +  +T    S   + V++ V   N   P F  + Y 
Sbjct: 62  YDSKAHQLNAVGNLKAGERYEIEAREVNTTPIRSSEPISVTIHVMDINDNPPRFSSSIYT 121

Query: 162 VNVSEGASINSTV 174
            +VS    I+  V
Sbjct: 122 ASVSANGIIDRPV 134


>gi|397495187|ref|XP_003818441.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
            [Pan paniscus]
          Length = 4186

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 997  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1056

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1057 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1115

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1116 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1160



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 454 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 506

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 507 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 566

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 567 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 626

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 627 DVRPHTVVLRVTAT 640



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 916  INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 970

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 971  LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 1029

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 1030 QFVASHYTGLVSEDAPPFTSVLQISAT 1056



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 784 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 840

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 841 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 896

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 897 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 953



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 414 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 473

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 474 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 528



 Score = 43.1 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1120 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1176

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V + +V   N 
Sbjct: 1177 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHIRLV-DQND 1234

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1235 NSPVLNNFQILFNNYVSNRSD 1255



 Score = 43.1 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 596 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 653

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 654 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 711

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N   P+F    + V+V E A +  +V  I
Sbjct: 712 VDI------NDHIPIFVSTPFQVSVLENAPLGHSVIHI 743


>gi|195483670|ref|XP_002090383.1| GE12832 [Drosophila yakuba]
 gi|194176484|gb|EDW90095.1| GE12832 [Drosophila yakuba]
          Length = 3570

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDMEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
            AltName: Full=Protein kugelei; Flags: Precursor
          Length = 4705

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ DINDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 3274 TVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 3333

Query: 96   TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 3334 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISIL-DINDN 3390

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SP F QN Y +NV+E   + S +  +
Sbjct: 3391 SPTFLQNLYRINVNEDIFVGSKILDV 3416



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-Q 62
            ++  LDR+  N  +   +V   +      S    + V++ DINDN+P     +  +Q+  
Sbjct: 1250 TERKLDRE--NQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPS 1307

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
            +    + I ++ A D+D G N  ITYSI   S  G +KFRID + G I     L +  ++
Sbjct: 1308 SATVNQSIFQVHAIDSDSGENGRITYSIK--SGKGKNKFRIDSQRGHIHIAKPLDSDNEF 1365

Query: 123  SITVQATDTG-GKSSQT 138
             I ++A D G  K SQT
Sbjct: 1366 EIHIKAEDNGIPKKSQT 1382



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
            KF F  I     GT    P+S    + +++ DINDN+P   +    +I   E      +I
Sbjct: 3358 KFYFLTIQAIDGGTP---PLSNNAYVNISILDINDNSPTF-LQNLYRINVNEDIFVGSKI 3413

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            + ++ATD D  VN  +TY+I    N G  +F IDP++G I  +  L       Y++ +QA
Sbjct: 3414 LDVKATDEDSDVNGLVTYNIERGDNIG--QFSIDPKNGTISVSRPLDRETISHYTLEIQA 3471

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G       V +++ +   N  +P+F  + Y V + E   +     T  +S
Sbjct: 3472 CDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKIS 3524



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20   RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            +++++A  + G   +      + + +NDINDN P   M      +P    +  +    I 
Sbjct: 3150 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVP----EDAQLNTLIT 3205

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
            K+ A D D GVN +I YS+   ++     F+I   +G+I     L       +++TV+A 
Sbjct: 3206 KVHAMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLHKSLDRETISLFNLTVKAE 3262

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G     +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 3263 DCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 3319



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
            LDR+  +   +   + A++      S    + V ++D+NDNAP   +   I +++    R
Sbjct: 935  LDREKQD--NYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPR 992

Query: 68   RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
              ++  IEA D D+G NAEI +S+   +      FRID  +G I T G L    +  +++
Sbjct: 993  GTVLAVIEAVDEDIGPNAEIQFSLKEETQDE-ELFRIDKHTGAIRTQGYLDYENKQVHNL 1051

Query: 125  TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             V A D G     S  +IV + +    N  +P F    Y+  V E     + V  +T
Sbjct: 1052 IVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVT 1108



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+ P     +I     ++     ++ ++ A D D G NAEI YSI    N 
Sbjct: 1595 IIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSII-TGNV 1653

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G   F IDP  G+I   G L     ++Y + V+A D G    SSQ  V + V    N   
Sbjct: 1654 G-SVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSEND-P 1711

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F  N   + + E   I + V  +T
Sbjct: 1712 PKFPTNNIAIEIFENLPIGTFVTQVT 1737



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%)

Query: 32   AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNA 84
             A VP+S    + + + + NDN P L   P   +   EA     +I+ ++A D D+    
Sbjct: 1165 CAIVPLSNCVEVYIQVENENDNIP-LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQ 1223

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTI 139
             ITY+I  VS   +  F ID ++GVI+TT + +  E   ++ + V  +D G    SS + 
Sbjct: 1224 TITYNI--VSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSR 1281

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + VSV+   N  SP F Q  Y V V   A++N ++  +
Sbjct: 1282 IVVSVL-DINDNSPEFDQRVYKVQVPSSATVNQSIFQV 1318



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ + + LD +  +        I +   G+       + +++ D+NDN P    +  + I
Sbjct: 453 MLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKV-I 511

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              E   A   +VK+ A D D G N+ I+YSI   +N     F ID  SG+++TT  L  
Sbjct: 512 SINENNLAGSFVVKLTAKDRDSGENSYISYSI---ANLNAVPFEIDHFSGIVKTTSLLDF 568

Query: 117 -IAGEQYSITVQATDTG-GKSSQTIVEVS-VVPGPNTRSPVFQQ-NTY 160
                 Y + ++A+D G     QT +++S VV   N   P F++ N Y
Sbjct: 569 ETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCY 616



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           +Q GE    +  IEA D DLG N ++ ++I       +  FRIDP  G ++  G L    
Sbjct: 782 VQLGET---VAWIEAKDRDLGYNGKLVFAISDGDYDSV--FRIDPDRGELQIIGYLDRER 836

Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           Q  Y + +   D G   KS+  ++ ++++   + R PV Q+      ++E A I + V  
Sbjct: 837 QNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNR-PVIQKTLATFRLTESARIGTVVHC 895

Query: 177 ITVSRLASG 185
           +  +   SG
Sbjct: 896 LHATDADSG 904



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 20/182 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           L  D   P +F ++ +  + +  + ++P+  T  + +++     +P   PI +       
Sbjct: 368 LAEDLGTPRRFAYKSVPIQIKPESKNIPI-FTQEIYEVS-----IPETAPINMP------ 415

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ +D DLG NA +   I  V      +FRI+P SG++ T  +L A ++  Y++TV
Sbjct: 416 -VIRLKVSDPDLGKNALVYLEI--VGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTV 472

Query: 127 QATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            A D    G   Q+  +V + V   N   P+F+     ++++E     S V  +T     
Sbjct: 473 SAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRD 532

Query: 184 SG 185
           SG
Sbjct: 533 SG 534



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 43   LNDINDNAPRLPMIPP---IQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGL 98
            + D+NDNAP    + P    ++     R Q V + +A D D+     + Y I  V    L
Sbjct: 2455 VKDLNDNAP--CFVEPSYFTKVSVAAVRGQFVALPKAYDKDISDTDSLEYKI--VYGNEL 2510

Query: 99   HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQ 157
              + ID  +GVI     L   ++ S  +  + + G  ++   +++S++P  N  SP+F Q
Sbjct: 2511 QTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLLP-ENVYSPLFDQ 2569

Query: 158  NTYDVNVSEGASINSTVATITVS 180
            +TY+  V E       + T+  S
Sbjct: 2570 STYEAQVPENLLHGHNIITVKAS 2592



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 9   LDRDPPNPGKFRFQV--IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           LDR+  N       V  +    + T+  +P+++     D+NDN P +            A
Sbjct: 832 LDRERQNEYVLNITVYDLGNPTKSTSKMLPITIL----DVNDNRPVIQKTLATFRLTESA 887

Query: 67  RRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
           R   V   + ATD D G+NA++TY++    +     F ++  +G +     L   +Q  Y
Sbjct: 888 RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCLRLNKPLDREKQDNY 943

Query: 123 SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ + A D G    SS+ +V V +V   N  +PVF    Y   V E     + +A I
Sbjct: 944 ALHITAKDGGSPVLSSEALVYV-LVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVI 999



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 13/86 (15%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
           + I+K+ A D DLG+N EI YS+   S      F I P +G I    +L   E   + +T
Sbjct: 197 QSILKVTADDADLGINGEIYYSLLMDS----EYFAIHPTTGEITLLQQLQYAENSHFELT 252

Query: 126 VQATDTGG-------KSSQTIVEVSV 144
           V A D G        ++S+T V +SV
Sbjct: 253 VVAYDRGSWVNHQNHQASKTKVSISV 278



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 22   QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
            Q + RE+Q           ++VPV      + +++ D NDN P+           +  E 
Sbjct: 2832 QTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 2891

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               +VK+ ATD D G N +I Y +   +    + F ID  SG I     L      +Y+ 
Sbjct: 2892 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 2951

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V A D G       V V++ +   N  +PVF+     ++V E A
Sbjct: 2952 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENA 2996



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+ +++ D+NDN P    +P    + I   +    I++++A D D   N E+ Y +    
Sbjct: 2122 SIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKK-G 2179

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
            N  L  F++D +SG + +  + + G    Y +TV A D      SS+  ++V V+   + 
Sbjct: 2180 NGEL--FKLDRKSGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVI---DR 2233

Query: 151  RSPVFQQNTYDVNVSEGASINSTVA 175
              PVF++  Y V+V E   + S ++
Sbjct: 2234 SMPVFEKQFYTVSVKEDVEMYSALS 2258



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 29/159 (18%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
            V L+V++ D+ND  P +   I  + I +      QI+KI ATDND G NA+++Y I  + 
Sbjct: 2322 VVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESIN 2381

Query: 94   --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKS-------------- 135
              +N+ L  F ID   G   ++T       + + I V   D G  S              
Sbjct: 2382 GQNNSEL--FYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITGRIL 2439

Query: 136  ----SQTIVEVSVVP--GPNTRSPVFQQNTYDVNVSEGA 168
                S  ++  S++P    N  +P F + +Y   VS  A
Sbjct: 2440 CRFISYKLIYDSIIPVKDLNDNAPCFVEPSYFTKVSVAA 2478



 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSIT 125
              I+ ++A+D D G  A + Y I  VS      F ID  +GVI  + T      ++Y + 
Sbjct: 2584 HNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQTTGVITSKVTFDREKKDEYVVL 2641

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ +D GGK     ++V VV   N   P F    Y + VS     N T+ T+
Sbjct: 2642 LKVSDGGGKFGFASLKVIVVD-VNDNVPYFLLKEYKMVVSTTVEANQTILTV 2692


>gi|386767716|ref|NP_001246258.1| starry night, isoform E [Drosophila melanogaster]
 gi|383302402|gb|AFH08012.1| starry night, isoform E [Drosophila melanogaster]
          Length = 3578

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|326932180|ref|XP_003212198.1| PREDICTED: protocadherin gamma-B1-like [Meleagris gallopavo]
          Length = 658

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 23/129 (17%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDN 78
           + GTA      + V++ D NDNAP         R+P   P    A        +++ATD 
Sbjct: 348 RSGTA-----QIKVDVTDANDNAPVFDKEIYKVRVPENLPEGSLA-------FQVKATDG 395

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
           D G NAEITYS   ++++    F +DP++G ++ TG L   +   Y +TV+  D GG S+
Sbjct: 396 DEGTNAEITYSFNDIASSAHQLFSLDPKTGDVKITGPLDYEDMKYYEVTVEGKDGGGLST 455

Query: 137 QTIVEVSVV 145
            T V + V+
Sbjct: 456 HTKVHIEVI 464


>gi|118092647|ref|XP_421595.2| PREDICTED: cadherin-23 [Gallus gallus]
          Length = 3365

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L++S   LDR+     ++  +V+A +    + S   +LTV + D+ND +P   P I  + 
Sbjct: 952  LIISTTVLDRE--RITEYYLRVVASDAGTPSKSSTSTLTVKVLDVNDESPTFFPAIYNVS 1009

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +    AR  ++V++  TD D+G+NAE++Y I   +  G  KF +  R GV+ T   L   
Sbjct: 1010 LPENVARDFKVVRLNCTDADVGLNAELSYFITGGNQDG--KFSVGFRDGVVRTVVSLDRE 1067

Query: 120  --EQYSITVQATD---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y++ ++A D   TG + + T      V   N   P+F Q++Y+ +V E     S++
Sbjct: 1068 TVASYALILEAIDNGPTGNRRTGTATVYVTVLDVNDNRPIFLQSSYEASVPEDIPAASSI 1127

Query: 175  ATITVSRLASGC 186
              +  +    G 
Sbjct: 1128 VQVKATDADEGV 1139



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +L V + D+NDN P +       +   E       +V++ ATD D G+N+ ++Y I H  
Sbjct: 1518 TLRVTVLDVNDNPPIIDSPLGYNVSVSENVGGGTAVVQVRATDRDAGLNSVLSYYITH-G 1576

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            N  L  FR+D  +G I T       E+   Y + V   D G  S     +V V +   N 
Sbjct: 1577 NEDL-TFRMDRVTGEIATRPSPPDRERQSSYCLLVTVEDEGTPSLSATTKVFVTILDEND 1635

Query: 151  RSPVFQQNTYDVNVSEG-ASINSTVATI 177
             +PVFQQ  Y+V + EG A++N+T+ T+
Sbjct: 1636 NAPVFQQQLYEVTLDEGPATLNATLVTV 1663



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            +DR+        F +IA +  G  ++   SLTV + D NDN P   +  P+ I A     
Sbjct: 2033 IDREALLDPLLEFTLIALDTGGLNSTA--SLTVTILDDNDNRP---VFQPVSITARLREN 2087

Query: 69   Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  ++++ ATD D G+N ++ Y I      G  +F ID  +GVI      I  E+  
Sbjct: 2088 SPPGFSVLQVTATDADSGLNKQLDYRI---EGGGQDRFLIDATTGVIRVANLSIDREERD 2144

Query: 122  -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV A D G  +      VS+ +   N   P F      V+V E A+  + VA +T
Sbjct: 2145 AYQLTVVAVDQGTPALSGTATVSIFIDDVNDCRPEFINPIQTVSVPESATPGTVVAEVT 2203



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 14/172 (8%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLT---VNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
            G++   V A ++   A+    S T   VNLNDINDN P    P   P  +  G+   +I 
Sbjct: 1711 GRYTLVVTATDQCPIASRRLTSTTTVLVNLNDINDNCPTFPRPYEGPFDVTEGQPGPRIW 1770

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQ 127
               A D D G   ++ YSI  ++   L +F I P  G +          +    Y++T+ 
Sbjct: 1771 TFLAHDGDSGPGGQVEYSI--IAGDPLGEFVISPVEGELRVRKDAELDRENIPFYNLTIS 1828

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G    SS  +V V V+   N   PV      ++ +SE A ++S V  I
Sbjct: 1829 ARDRGVPPLSSTMLVGVRVL-DINDNDPVLLNLPMNITLSEHAPVSSFVTRI 1879



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 24/177 (13%)

Query: 25   AREKQGTAASVP-VSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDN 78
            A E    + SVP   LTVN+ D+NDN PR             ++       ++ I A D 
Sbjct: 2270 ASEVTDRSVSVPNAKLTVNVLDVNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDP 2329

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATD 130
            D G N +ITY +  +S  G             ++ GK++A         +  + TV+A+D
Sbjct: 2330 DKGANGQITYELLDLSPEGYACLE-------DQSAGKVVANRTVDYEEVQWLNFTVRASD 2382

Query: 131  TGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G   +S++  V + +V   N  +P+F Q +Y   V E   + + +  +  +   SG
Sbjct: 2383 NGSPRRSAEIPVYLQIV-DINDNNPIFSQPSYQKAVFEDVPLGTVILRVKATDADSG 2438



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 11/186 (5%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
            +LDR+         + I     G   +   ++ V + D+NDN P + +    +    E  
Sbjct: 1063 SLDRETVASYALILEAIDNGPTGNRRTGTATVYVTVLDVNDNRP-IFLQSSYEASVPEDI 1121

Query: 66   -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS- 123
             A   IV+++ATD D GVN  + Y I  V     + FRI+P SG++    + +  EQ S 
Sbjct: 1122 PAASSIVQVKATDADEGVNGRVWYRI--VKGNEHNNFRINPSSGLLMRGVRPLDREQNSS 1179

Query: 124  --ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITV 179
              + V+A +T     ++ V V V V   N   PVF Q  Y+ + + E A I ++VA +  
Sbjct: 1180 HVLEVEAYNTEHGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRA 1239

Query: 180  SRLASG 185
            +   +G
Sbjct: 1240 TDRDTG 1245



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAG-EARRQIVKI 73
            +F   V+A +K          L + + DINDN P   R P    + I+     R  + ++
Sbjct: 2582 RFNLTVVATDKGRPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKEEIPLRSNVYEV 2641

Query: 74   EATDNDLGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             ATD D G+N  + YS+      N     F ID  SG+I+T  +L   +Q  Y++ + A+
Sbjct: 2642 YATDKDEGLNGAVLYSLLKTGAGNKDWEYFSIDAVSGLIQTAMRLDREKQAEYNLIIVAS 2701

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD 161
            D G  + +T+  + V +   +   P+F + + D
Sbjct: 2702 DQGQPAYETMQPLQVALDDIDDNEPIFLRPSRD 2734



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 19/172 (11%)

Query: 9    LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
            LDR+ PNP +    R  V++    G     A+   ++ VNL D+NDN P    +P I +I
Sbjct: 846  LDRENPNPQEAELMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFIAEI 905

Query: 62   QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
              G  A   + ++ A D D G N  +TY +      G+ +  F I+  SG+I +T  L  
Sbjct: 906  SEGLPAGTSVFQVLAIDLDEGPNGWVTYRM----QVGMPRMDFLINSTSGLIISTTVLDR 961

Query: 119  GE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                +Y + V A+D G   KSS + + V V+   N  SP F    Y+V++ E
Sbjct: 962  ERITEYYLRVVASDAGTPSKSSTSTLTVKVL-DVNDESPTFFPAIYNVSLPE 1012



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 14/155 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLP--MIPPIQIQ 62
            LDR+  +   +    +AR+  G  +S      V + + + DIND  P+           +
Sbjct: 2469 LDREKKD--HYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYE 2526

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
               A   ++ + ATD D G N  +TYSI      G   F+I+  SG+I +  +L + E++
Sbjct: 2527 NEPAGTSVITMTATDLDEGDNGVVTYSI---EGPGAEAFKINKDSGLITSRRRLQSYERF 2583

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVF 155
            ++TV ATD G       T++ + V+   + R PVF
Sbjct: 2584 NLTVVATDKGRPPLWGTTMLHIEVIDINDNR-PVF 2617



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 34/185 (18%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARR------Q 69
           ++   VIAR+  G        + +N+ D+NDN      +P  Q +A  G  R       Q
Sbjct: 534 RYTLTVIARD--GGGEETAGRIRINVLDVNDN------VPTFQKEAYLGALRENEPSVTQ 585

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR------IDPRSGVIETTGKL-----IA 118
           +V++ A+D D   N +ITYSI H S      FR      +    GVI     L     + 
Sbjct: 586 VVRLRASDEDSPPNNQITYSIVHAS-----AFREYFDITVSEGYGVISVNHPLDYEQVVN 640

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           G  Y +TV A D G     + V V++ V   N   P F + +Y + V E     +TV  +
Sbjct: 641 GVIY-LTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYVIAVMEDIMAGATVLFL 699

Query: 178 TVSRL 182
             + L
Sbjct: 700 NATDL 704



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 17/164 (10%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITY 88
            +A +PV L +   DINDN P     P  Q    E       I++++ATD D G  A I Y
Sbjct: 2389 SAEIPVYLQIV--DINDNNPIFSQ-PSYQKAVFEDVPLGTVILRVKATDADSGRFAVIQY 2445

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-- 144
            S+      G  KF I+P +G I     L     + Y++T  A D  G  S    E SV  
Sbjct: 2446 SL----GDGEGKFGINPDTGDIYILSALDREKKDHYTLTAVARDNPGDISSNRRENSVQV 2501

Query: 145  ---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               V   N   P F ++ +  +V E     ++V T+T + L  G
Sbjct: 2502 LITVLDINDFRPQFSKSQFSTSVYENEPAGTSVITMTATDLDEG 2545



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           ++++ ATDND+G   +++Y      +    +F +D  +GVI    +L     ++Y++TV 
Sbjct: 485 VLQVHATDNDVGSYGKVSYFF----SDDPDRFSLDKDTGVILLMARLDFETMQRYTLTVI 540

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   + ++V+   N   P FQ+  Y
Sbjct: 541 ARDGGGEETAGRIRINVL-DVNDNVPTFQKEAY 572



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 13/170 (7%)

Query: 17  GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKI 73
           G     V+A++      +  V +T+ + D NDN P     P   I   E   A   ++ +
Sbjct: 641 GVIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSK-PSYVIAVMEDIMAGATVLFL 699

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            ATD D          IY +   G   FRI+ RSG I TT  L   A  +Y + V+A D 
Sbjct: 700 NATDLDRSREYGQESIIYSLE--GSSHFRINARSGEITTTSLLDREAKSEYILIVRAVDG 757

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           G     K+   +V ++++   N   P ++   Y +N+ E    NS V T+
Sbjct: 758 GVGHHQKTGIAMVNITLL-DINDNYPTWKDAPYFINLVEMTPPNSDVTTV 806



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 23   VIAREKQGT-AASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEA--RRQIVKIEATDN 78
            ++  E +GT + S    + V + D NDNAP     +  + +  G A     +V ++A D 
Sbjct: 1609 LVTVEDEGTPSLSATTKVFVTILDENDNAPVFQQQLYEVTLDEGPATLNATLVTVQALDR 1668

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKS 135
            D G N+ +TY+I       L  F I+  +G I T  +L   I+  +Y++ V ATD    +
Sbjct: 1669 DEGPNSTVTYAI--TEGNILGTFYINSTTGQIRTLKELDYEISHGRYTLVVTATDQCPIA 1726

Query: 136  SQTIVEVSVV 145
            S+ +   + V
Sbjct: 1727 SRRLTSTTTV 1736



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 21/186 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---- 57
           +V  ++ LDR+     +F  +    + QG    +  ++ + + D+NDNAPR    P    
Sbjct: 92  VVWLRQPLDRE--TKSEFTVEFSVSDSQGV---IKGTVNIQVGDVNDNAPRFHNQPYSVR 146

Query: 58  -PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P     G     I  + ATD D G    + YS    S+     F ID   G++    +L
Sbjct: 147 IPENTPVGTP---IFIVNATDPDQGAGGSVLYSFQPPSSF----FAIDSGRGIVTVIREL 199

Query: 117 I--AGEQYSITVQATDTG-GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
                + Y + V ATD    K   T+  +++ +       P+F    Y  N+ E +   +
Sbjct: 200 DYEVTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIFINLPYSTNIYENSPPGT 259

Query: 173 TVATIT 178
           TV  IT
Sbjct: 260 TVRMIT 265



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 14/178 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+  N   +   + AR++     S  + + V + DINDN P L  + P+ I   E   
Sbjct: 1815 LDRE--NIPFYNLTISARDRGVPPLSSTMLVGVRVLDINDNDPVLLNL-PMNITLSEHAP 1871

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQ 121
                + +I A D D G NA +T+ I   +      F I+  +G+I     L    +A  +
Sbjct: 1872 VSSFVTRILAQDADQGPNALLTFDI--TAGNKESAFYINSTTGIIYVNRPLDREQVAEYR 1929

Query: 122  YSITVQATDTGGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +ITV+      ++++   ++ V  +   N   P+F Q++Y   V E +   + V  +
Sbjct: 1930 LTITVKDNPENIRNARRDFDLLVISIADENDNHPLFTQSSYQAEVMENSPAGTPVTML 1987



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 33/173 (19%)

Query: 39   LTVNLNDINDNAPRL-------------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            L +++ D NDN P               P   P+ +  G        I A D+D G NA 
Sbjct: 1951 LVISIADENDNHPLFTQSSYQAEVMENSPAGTPVTMLNG-------PILALDSDQGSNAV 2003

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ-----YSITVQATDTGGKSSQTI 139
            +TY +     T    F I+ R+GV+    G +I  E         T+ A DTGG +S   
Sbjct: 2004 VTYQLL---GTSPDLFIINNRTGVVSVKPGGVIDREALLDPLLEFTLIALDTGGLNSTAS 2060

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
            + V+++   + R PVFQ  +    + E +    +V  +T +   SG   +NK+
Sbjct: 2061 LTVTILDDNDNR-PVFQPVSITARLRENSPPGFSVLQVTATDADSG---LNKQ 2109


>gi|5832705|dbj|BAA84069.1| Flamingo [Drosophila melanogaster]
          Length = 3575

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 416 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 470

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 471 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 530

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 531 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 589

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 590 QVPEDQWGGTEDNTVAHI 607



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 656 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 715

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 716 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 773

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 774 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 820



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 865  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 922

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 923  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 982

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 983  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1033



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 753 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 807

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 808 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 863

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 864 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 922

Query: 180 S 180
           +
Sbjct: 923 T 923



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 960  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1017

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1018 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1074

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1075 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1134

Query: 176  TI 177
             I
Sbjct: 1135 EI 1136



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 408 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 465

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 466 EAEQFEASIREGATVGSTVITL 487



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 530 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 587

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 588 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 644

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 645 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 701


>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
 gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
          Length = 4699

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ DINDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 3258 TVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 3317

Query: 96   TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 3318 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISIL-DINDN 3374

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SP F QN Y +NV+E   + S +  +
Sbjct: 3375 SPTFLQNLYRINVNEDIFVGSKILDV 3400



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-Q 62
            ++  LDR+  N  +   +V   +      S    + V++ DINDN+P     +  +Q+  
Sbjct: 1253 TERKLDRE--NQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPS 1310

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
            +    + I ++ A D+D G N  ITYSI   S  G +KFRID + G I     L +  ++
Sbjct: 1311 SATVNQSIFQVHAIDSDSGENGRITYSIK--SGKGKNKFRIDSQRGHIHIAKPLDSDNEF 1368

Query: 123  SITVQATDTG-GKSSQT 138
             I ++A D G  K SQT
Sbjct: 1369 EIHIKAEDNGIPKKSQT 1385



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
            KF F  I     GT    P+S    + +++ DINDN+P   +    +I   E      +I
Sbjct: 3342 KFYFLTIQAIDGGTP---PLSNNAYVNISILDINDNSPTF-LQNLYRINVNEDIFVGSKI 3397

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            + ++ATD D  VN  +TY+I    N G  +F IDP++G I  +  L       Y++ +QA
Sbjct: 3398 LDVKATDEDSDVNGLVTYNIERGDNIG--QFSIDPKNGTISVSRPLDRETISHYTLEIQA 3455

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G       V +++ +   N  +P+F  + Y V + E   +     T  +S
Sbjct: 3456 CDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKIS 3508



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20   RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            +++++A  + G   +      + + +NDINDN P   M      +P    +  +    I 
Sbjct: 3134 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVP----EDAQLNTLIT 3189

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
            K+ A D D GVN +I YS+   ++     F+I   +G+I     L       +++TV+A 
Sbjct: 3190 KVHAMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLHKSLDRETISLFNLTVKAE 3246

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G     +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 3247 DCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 3303



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
            LDR+  +   +   + A++      S    + V ++D+NDNAP   +   I +++    R
Sbjct: 938  LDREKQD--NYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPR 995

Query: 68   RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
              ++  IEA D D+G NAEI +S+   +      FRID  +G I T G L    +  +++
Sbjct: 996  GTVLAVIEAVDEDIGPNAEIQFSLKEETQDE-ELFRIDKHTGAIRTQGYLDYENKQVHNL 1054

Query: 125  TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             V A D G     S  +IV + +    N  +P F    Y+  V E     + V  +T
Sbjct: 1055 IVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVT 1111



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+ P     +I     ++     ++ ++ A D D G NAEI YSI    N 
Sbjct: 1598 IIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSII-TGNV 1656

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G   F IDP  G+I   G L     ++Y + V+A D G    SSQ  V + V    N   
Sbjct: 1657 G-SVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSEND-P 1714

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F  N   + + E   I + V  +T
Sbjct: 1715 PKFPTNNIAIEIFENLPIGTFVTQVT 1740



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%)

Query: 32   AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNA 84
             A VP+S    + + + + NDN P L   P   +   EA     +I+ ++A D D+    
Sbjct: 1168 CAIVPLSNCVEVYIQVENENDNIP-LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQ 1226

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTI 139
             ITY+I  VS   +  F ID ++GVI+TT + +  E   ++ + V  +D G    SS + 
Sbjct: 1227 TITYNI--VSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSR 1284

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + VSV+   N  SP F Q  Y V V   A++N ++  +
Sbjct: 1285 IVVSVL-DINDNSPEFDQRVYKVQVPSSATVNQSIFQV 1321



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ + + LD +  +        I +   G+       + +++ D+NDN P    +  + I
Sbjct: 456 MLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKV-I 514

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              E   A   +VK+ A D D G N+ I+YSI   +N     F ID  SG+++TT  L  
Sbjct: 515 SINENNLAGSFVVKLTAKDRDSGENSYISYSI---ANLNAVPFEIDHFSGIVKTTSLLDF 571

Query: 117 -IAGEQYSITVQATDTG-GKSSQTIVEVS-VVPGPNTRSPVFQQ-NTY 160
                 Y + ++A+D G     QT +++S VV   N   P F++ N Y
Sbjct: 572 ETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCY 619



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           +Q GE    +  IEA D DLG N ++ ++I       +  FRIDP  G ++  G L    
Sbjct: 785 VQLGET---VAWIEAKDRDLGYNGKLVFAISDGDYDSV--FRIDPDRGELQIIGYLDRER 839

Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           Q  Y + +   D G   KS+  ++ ++++   + R PV Q+      ++E A I + V  
Sbjct: 840 QNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNR-PVIQKTLATFRLTESARIGTVVHC 898

Query: 177 ITVSRLASG 185
           +  +   SG
Sbjct: 899 LHATDADSG 907



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 18   KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKI 73
            K+   V+  +  G+ + S   ++ + + D+NDNAP    + P    ++     R Q V +
Sbjct: 2413 KYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAP--CFVEPSYFTKVSVAAVRGQFVAL 2470

Query: 74   -EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             +A D D+     + Y I  V    L  + ID  +GVI     L   ++ S  +  + + 
Sbjct: 2471 PKAYDKDISDTDSLEYKI--VYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSD 2528

Query: 133  G-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  ++   +++S++P  N  SP+F Q+TY+  V E       + T+  S
Sbjct: 2529 GVHTAYARLKISLLP-ENVYSPLFDQSTYEAQVPENLLHGHNIITVKAS 2576



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 20/182 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           L  D   P +F ++ +  + +  + ++P+  T  + +++     +P   PI +       
Sbjct: 371 LAEDLGTPRRFAYKSVPIQIKPESKNIPI-FTQEIYEVS-----IPETAPINMP------ 418

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++ +D DLG NA +   I  V      +FRI+P SG++ T  +L A ++  Y++TV
Sbjct: 419 -VIRLKVSDPDLGKNALVYLEI--VGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTV 475

Query: 127 QATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
            A D    G   Q+  +V + V   N   P+F+     ++++E     S V  +T     
Sbjct: 476 SAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRD 535

Query: 184 SG 185
           SG
Sbjct: 536 SG 537



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 10/140 (7%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
            V L+V++ D+ND  P +   I  + I +      QI+KI ATDND G NA+++Y I  + 
Sbjct: 2325 VVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESIN 2384

Query: 94   --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +N+ L  F ID   G   ++T       + + I V   D G  S  +   V + V   
Sbjct: 2385 GQNNSEL--FYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDL 2442

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N  +P F + +Y   VS  A
Sbjct: 2443 NDNAPCFVEPSYFTKVSVAA 2462



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 9    LDRDPPNPGKFRFQV--IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            LDR+  N       V  +    + T+  +P+++     D+NDN P +            A
Sbjct: 835  LDRERQNEYVLNITVYDLGNPTKSTSKMLPITIL----DVNDNRPVIQKTLATFRLTESA 890

Query: 67   RRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
            R   V   + ATD D G+NA++TY++    +     F ++  +G +     L   +Q  Y
Sbjct: 891  RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCLRLNKPLDREKQDNY 946

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ + A D G    SS+ +V V +V   N  +PVF    Y   V E     + +A I
Sbjct: 947  ALHITAKDGGSPVLSSEALVYV-LVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVI 1002



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 13/86 (15%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
           + I+K+ A D DLG+N EI YS+   S      F I P +G I    +L   E   + +T
Sbjct: 200 QSILKVTADDADLGINGEIYYSLLMDS----EYFAIHPTTGEITLLQQLQYAENSHFELT 255

Query: 126 VQATDTGG-------KSSQTIVEVSV 144
           V A D G        ++S+T V +SV
Sbjct: 256 VVAYDRGSWVNHQNHQASKTKVSISV 281



 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 22   QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
            Q + RE+Q           ++VPV      + +++ D NDN P+           +  E 
Sbjct: 2816 QTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 2875

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               +VK+ ATD D G N +I Y +   +    + F ID  SG I     L      +Y+ 
Sbjct: 2876 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 2935

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V A D G       V V++ +   N  +PVF+     ++V E A
Sbjct: 2936 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENA 2980



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+ +++ D+NDN P    +P    + I   +    I++++A D D   N E+ Y +    
Sbjct: 2125 SIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKK-G 2182

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
            N  L  F++D +SG + +  + + G    Y +TV A D      SS+  ++V V+   + 
Sbjct: 2183 NGEL--FKLDRKSGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVI---DR 2236

Query: 151  RSPVFQQNTYDVNVSEGASINSTVA 175
              PVF++  Y V+V E   + S ++
Sbjct: 2237 SMPVFEKQFYTVSVKEDVEMYSALS 2261



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSIT 125
              I+ ++A+D D G  A + Y I  VS      F ID  +GVI  + T      ++Y + 
Sbjct: 2568 HNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQTTGVITSKVTFDREKKDEYVVL 2625

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ +D GGK     ++V VV   N   P F    Y + VS     N T+ T+
Sbjct: 2626 LKVSDGGGKFGFASLKVIVV-DVNDNVPYFLLKEYKMVVSTTVEANQTILTV 2676


>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]
          Length = 3579

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|195333203|ref|XP_002033281.1| GM21230 [Drosophila sechellia]
 gi|194125251|gb|EDW47294.1| GM21230 [Drosophila sechellia]
          Length = 3575

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
 gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
          Length = 4446

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ DINDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 3019 TVAVNILDINDNPPEFSMRQYSCEILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 3078

Query: 96   TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 3079 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISIL-DINDN 3135

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SP F QN Y VNV+E   + S +  I
Sbjct: 3136 SPKFLQNLYRVNVNEDIFVGSKILDI 3161



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 7/137 (5%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-Q 62
            ++  LDR+  N  +   +V   +      S    + V++ DINDN+P     +  +Q+  
Sbjct: 1106 TERKLDRE--NQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPS 1163

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
            +    + I ++ A D+D G N  ITYSI   S  G +KFRID + G I     L +  ++
Sbjct: 1164 SATVNQSIFQVHAIDSDSGENGRITYSIK--SGKGKNKFRIDSQRGHIHIAKPLDSDNEF 1221

Query: 123  SITVQATDTG-GKSSQT 138
             I ++A D+G  K SQT
Sbjct: 1222 EIHIKAEDSGIPKKSQT 1238



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
            KF F  I     GT    P+S    + +++ DINDN+P+  +    ++   E      +I
Sbjct: 3103 KFYFLTIQAIDGGTP---PLSNNAYVNISILDINDNSPKF-LQNLYRVNVNEDIFVGSKI 3158

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQA 128
            + I+ATD D  +N  +TY+I    N G  +F IDP++G I  +  L       Y++ +QA
Sbjct: 3159 LDIKATDEDSDINGLVTYNIEKGDNIG--QFSIDPKNGTISVSRPLDRETIPHYTLEIQA 3216

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G       V +++ +   N  +P+F    Y V + E   +     T  ++
Sbjct: 3217 CDQGNPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYVFLTFKIT 3269



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 9/146 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + VN++D ND+ P     +I     ++     ++ ++ A D D G NAEI YSI    N 
Sbjct: 1451 IIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSII-TGNV 1509

Query: 97   GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
            G   F IDP  GVI   G L     ++Y + V+A D G    SSQ  V + V    N   
Sbjct: 1510 G-SVFEIDPTFGVITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSEND-P 1567

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F  NT  + + E   I + V  +T
Sbjct: 1568 PKFSTNTIAIEIFENLPIGTFVTQVT 1593



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 16/158 (10%)

Query: 32   AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNA 84
             A VP+S    + + L + NDN P L   P   +   EA  +   I+ ++A D D+  N 
Sbjct: 1021 CAIVPLSNCVEVYIQLENENDNIP-LTDKPVYYVNVTEASLENVEIITLKAFDPDIDPNQ 1079

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTI 139
             +TY+I  VS   +  F ID ++GVI+TT + +  E   ++ + V  +D G    SS + 
Sbjct: 1080 TLTYNI--VSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSR 1137

Query: 140  VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + VSV+   N  SP F Q  Y V V   A++N ++  +
Sbjct: 1138 IVVSVL-DINDNSPEFDQRVYKVQVPSSATVNQSIFQV 1174



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 12/174 (6%)

Query: 20   RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIE 74
            +++++A  + G   +      + + +NDINDN P   M    ++ A E  +    I K+ 
Sbjct: 2895 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNTPIFSM-AQYRVSAPEDAQLNTLITKVH 2953

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
            A D D GVN +I YS+   ++     F+I   +G+I     L       +++TV+A D G
Sbjct: 2954 AMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLDKSLDRETISLFNLTVKAEDCG 3010

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                 +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 3011 VPKLHSIATVAVNILDINDNPPEFSMRQYSCEILENATHGTEVCKVYATSIDIG 3064



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 30/173 (17%)

Query: 37  VSLTVNLNDINDNAPRL-------------PMIPPI-------QIQAGEARRQIVKIEAT 76
           + L++ + DINDN P+              PM   +        +Q GE    +  IEA 
Sbjct: 594 IKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFELSINESVQLGET---VAWIEAK 650

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG- 133
           D DLG N ++ ++I       +  FRIDP  G ++  G L    Q  Y + +   D G  
Sbjct: 651 DRDLGYNGKLVFAILDGDYDSV--FRIDPDRGELQIIGYLDRERQNEYVLNITVYDLGNP 708

Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            KS+  ++ ++++   + R PV Q+      ++E A I + V  +  +   SG
Sbjct: 709 TKSTSKMLPITILDVNDNR-PVIQKTLATFRLTESARIGTVVHCLHATDADSG 760



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
           LDR+  +   +   + A++      S    + V ++D+NDNAP   +   I +++    R
Sbjct: 791 LDREKQD--NYALHITAKDGGNPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPR 848

Query: 68  RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
             ++  IEA D D+G NAEI +S+   +      FRID  +G I T G L    +  +++
Sbjct: 849 GTVLAVIEAVDEDIGPNAEIQFSLKEETQDK-ELFRIDKHTGAIRTQGYLDYENKQVHNL 907

Query: 125 TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            V A D G     S  +IV + +    N  +P F    Y+  + E
Sbjct: 908 IVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKIKE 952



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ + + LD +  +        I +   G+       + +++ D+NDN P    +  + I
Sbjct: 453 MLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKV-I 511

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              E   A   +VK+ A D D G N+ I+YSI   +N     F ID  SG+++TT  L  
Sbjct: 512 SINENNLAGSFVVKLTAKDRDSGENSYISYSI---ANLNAVPFEIDHFSGIVKTTSLLDF 568

Query: 117 -IAGEQYSITVQATDTG-GKSSQTIVEVS-VVPGPNTRSPVFQQ---------------N 158
                 Y + ++A+D G     QT +++S VV   N   P F++                
Sbjct: 569 ETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTE 628

Query: 159 TYDVNVSEGASINSTVATI 177
            ++++++E   +  TVA I
Sbjct: 629 VFELSINESVQLGETVAWI 647



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 18   KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKI 73
            K+   V+  +  G+ + S   ++ + + D+NDNAP    + P    ++     R Q V +
Sbjct: 2265 KYHHVVVNVKDHGSPSLSSRSNVFITVKDLNDNAP--CFVEPSYFTKLSVAAVRGQFVAL 2322

Query: 74   -EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             +A D D+     + Y I  V    L  + ID  +GVI     L   ++ S  +  + + 
Sbjct: 2323 PKAYDKDISDTDSLEYKI--VYGNELQTYSIDQLTGVISLQNMLNFTDKSSTVLNISVSD 2380

Query: 133  G-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  ++   +++S++P  N  SP F QNTY+V V E       + T+  S
Sbjct: 2381 GVHTTYARLKISLLP-ENVYSPQFDQNTYEVQVPENLLHGHNIITVKAS 2428



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +++++ +D DLG NA +   I  V      +FRI+P SG++ T  +L A ++  Y++TV 
Sbjct: 416 VIRLKVSDPDLGKNALVYLEI--VGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVS 473

Query: 128 ATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           A D    G   Q+  +V + V   N   P+F+     ++++E     S V  +T     S
Sbjct: 474 AIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDS 533

Query: 185 G 185
           G
Sbjct: 534 G 534



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 17/177 (9%)

Query: 9   LDRDPPNPGKFRFQV--IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           LDR+  N       V  +    + T+  +P+++     D+NDN P +            A
Sbjct: 688 LDRERQNEYVLNITVYDLGNPTKSTSKMLPITIL----DVNDNRPVIQKTLATFRLTESA 743

Query: 67  RRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
           R   V   + ATD D G+NA++TY++    +     F ++  +G I    +L   +Q  Y
Sbjct: 744 RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCIRLNKQLDREKQDNY 799

Query: 123 SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ + A D G    SS+ +V V +V   N  +PVF    Y   V E     + +A I
Sbjct: 800 ALHITAKDGGNPVLSSEALVYV-LVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVI 855



 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 22   QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
            Q + RE+Q           ++VPV      + +++ D NDN P+           +  E 
Sbjct: 2668 QTLDREQQESHTLIVMAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 2727

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               +VK+ ATD D G N +I Y +   +    + F ID  SG I     L      +Y+ 
Sbjct: 2728 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 2787

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V A D G       V V++ +   N  +PVF+     ++V E A
Sbjct: 2788 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENA 2832



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
           + I+K+ A D DLG+N EI YS+   S      F I P +G I    +L   E   + +T
Sbjct: 197 QSILKVTADDADLGINGEIYYSLLIDS----EYFAIHPTTGEITLLQQLQYAENSHFELT 252

Query: 126 VQATDTGGKSSQ 137
           V A D G   +Q
Sbjct: 253 VVAYDRGSWVNQ 264



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP 146
             +++ +  +H+ FRI+P +GVI   G +   + + +++TV+ T+   +SS   + + ++ 
Sbjct: 1601 FFNIISGNIHESFRINPSTGVIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIHILD 1660

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P F QN Y   +SE ASI S V  +
Sbjct: 1661 A-NDNIPYFVQNEYVGALSESASIGSYVLKV 1690



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 38   SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+ +++ D+NDN P    +P    + I   +    I++++A D D   N E+ Y +    
Sbjct: 1977 SIYISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYEL-KKG 2034

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
            N  L  F++D ++G + +  + + G    Y +TV A D      SS+  ++V V+   + 
Sbjct: 2035 NGEL--FKLDRKTGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVI---DR 2088

Query: 151  RSPVFQQNTYDVNVSEGASINSTVA 175
              PVF++  Y V+V E   + S ++
Sbjct: 2089 SMPVFEKQFYTVSVKEDVEMYSALS 2113



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 10/140 (7%)

Query: 37   VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
            V L+V++ D+ND  P +   I  I I +      QI+KI ATD D G NA+++Y I  + 
Sbjct: 2177 VVLSVSIMDVNDCYPEIESDIYNITIPENSSFGTQILKINATDKDSGANAKLSYYIESIN 2236

Query: 94   --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +N+ L  F ID   G   ++T       + + + V   D G  S  +   V + V   
Sbjct: 2237 GQNNSEL--FYIDVTDGNLYLKTPLDYEQVKYHHVVVNVKDHGSPSLSSRSNVFITVKDL 2294

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N  +P F + +Y   +S  A
Sbjct: 2295 NDNAPCFVEPSYFTKLSVAA 2314


>gi|221330158|ref|NP_724962.3| starry night, isoform A [Drosophila melanogaster]
 gi|320543771|ref|NP_001188903.1| starry night, isoform C [Drosophila melanogaster]
 gi|226694203|sp|Q9V5N8.4|STAN_DROME RecName: Full=Protocadherin-like wing polarity protein stan;
           AltName: Full=Protein flamingo; AltName: Full=Protein
           starry night; Flags: Precursor
 gi|220902172|gb|AAF58763.5| starry night, isoform A [Drosophila melanogaster]
 gi|318068565|gb|ADV37150.1| starry night, isoform C [Drosophila melanogaster]
          Length = 3579

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  V++  GL +      FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
           I T   L     + Y + V A D     S+       V+V V+   N   P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588

Query: 163 NVSE---GASINSTVATI 177
            V E   G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606



 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEITYSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 864  RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 76   TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+GVNA+ITYS+   S  GL     F I+P++G I T   L       Y +TV A D
Sbjct: 922  TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  S     +V + V   N  +P F+   Y  ++ E A + ++V  +  S
Sbjct: 982  GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+    G+F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I  +      
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S    V +++    N  +P+F+   Y  +V E A + +TV  ++ 
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921

Query: 180 S 180
           +
Sbjct: 922 T 922



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +V+   LDR+      +   V A++    + S    + + + D+NDNAP    P+     
Sbjct: 959  IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
            ++       ++++ A+D D+G+N  I Y +   S+  +    F IDP SG I T   L  
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   + +T  A D G     + VEV + +   N   P F  +   + V E + + S V 
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133

Query: 176  TI 177
             I
Sbjct: 1134 EI 1135



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  Q   G     +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700


>gi|242021153|ref|XP_002431010.1| predicted protein [Pediculus humanus corporis]
 gi|212516239|gb|EEB18272.1| predicted protein [Pediculus humanus corporis]
          Length = 1764

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 176 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 235

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D    G NA + YSI        TG   F I+  +GVI+T    +  
Sbjct: 236 AGMVVMTMTAVDYDDPNEGTNARLIYSIEKNVIEEETGSPIFEIESETGVIKTAVCCLDR 295

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE--GASINST- 173
           E+   YSI V A D GG        +  V   N   P+F ++ +   V E  GAS+    
Sbjct: 296 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPMFTKDEWFTEVDETAGASLPEIP 354

Query: 174 VATITV 179
           + T+TV
Sbjct: 355 ILTVTV 360


>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
 gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
          Length = 2493

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 25/191 (13%)

Query: 6   KENLDRDPPNPGKFRFQVIAREK-----QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           KE LDR+     KF F + AR+K     +GTA      +T+ L DINDN P+        
Sbjct: 397 KEELDRE--KVPKFTFGIKARDKGVPFKEGTA-----QITITLLDINDNPPKFSQ-EEYH 448

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL 116
               E  R    +++++A D D G    + YSI  VS++G  + FRI+P+ G+I  +  L
Sbjct: 449 TSIAENSRWGTSVLQVKAIDPDSG-PTNVVYSI--VSSSGHDRCFRINPQ-GLITLSCTL 504

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               +  Y  +V A+D G  SS  +V V+V    NT +P F++ +Y   V E AS+ ++V
Sbjct: 505 NYNTKHVYVFSVSASD-GMLSSTALVYVNVTDS-NTHAPEFKRRSYSAEVKEDASLGTSV 562

Query: 175 ATITVSRLASG 185
            T+  +   +G
Sbjct: 563 LTVLATDRDTG 573



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 10/176 (5%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+  +   +RF+V A +           + +++ D+NDN P   + P  + +  E  
Sbjct: 603 SLDREKVD--TYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVF-LKPSYEAKVREDI 659

Query: 68  R---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QY 122
           R   +++++ A+D D+G NA+I YS +  +  G   F ID   G+I T   L      +Y
Sbjct: 660 RPGGRVIEVSASDADIGKNAQIIYS-FASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEY 718

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
            +TV ATD G    Q  V+V V+      S P+F++  Y+V V E     S V T+
Sbjct: 719 ELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITV 774



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 18/194 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ +K  LDR+  +  +  F+V A +    +    + LT+N+ D+NDN P    I    I
Sbjct: 79  VITTKRGLDREFLD--RHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGP----IFERNI 132

Query: 62  QAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            A +          ++ + A+D D G N E+ Y I + S+     F I   SG +    K
Sbjct: 133 YAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILN-SDGDNSAFSIGEVSGAVTVMKK 191

Query: 116 LIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
           L   +   Y++ VQA D G   +S+   V+++++   N  +P F +  Y   + E   +N
Sbjct: 192 LDREKVPTYTLQVQAQDQGNPPRSATVTVKITLL-DVNDCTPQFSKKVYSATIREDVPVN 250

Query: 172 STVATITVSRLASG 185
             V T+  +    G
Sbjct: 251 QLVTTVRATDCDQG 264



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 19/136 (13%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVS 94
           VN+ D N +AP        +  + E +        ++ + ATD D G NA+I+YSI    
Sbjct: 531 VNVTDSNTHAPEFKR----RSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSI---- 582

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVEVSVVPGPNT 150
            T + +F +D  +GVI+T G L     + Y   V ATD G     +++ V + +    N 
Sbjct: 583 ATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIA-DVND 641

Query: 151 RSPVFQQNTYDVNVSE 166
             PVF + +Y+  V E
Sbjct: 642 NDPVFLKPSYEAKVRE 657



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 17  GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQI 70
           G F   V A++K         ++ + L D+NDNAP+        MIP    +     ++ 
Sbjct: 303 GVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIP----ENYAVGQEF 358

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQA 128
            +++A D D G N EIT+S           F I+  +G I    +L   +  +++  ++A
Sbjct: 359 YRVQAYDKDHGTNGEITFSFMQND----LPFSINENTGGISIKEELDREKVPKFTFGIKA 414

Query: 129 TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G    +   ++++ +   N   P F Q  Y  +++E +   ++V  +
Sbjct: 415 RDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQV 464



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
           +  + A+D D G N  I YS+    N      F ID  +GVI T   L     +++   V
Sbjct: 39  VATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRV 98

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +A D G  S +  +++++ V   N   P+F++N Y  ++ E  SI   V  +  S   SG
Sbjct: 99  KAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSG 158



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 11/159 (6%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEAT 76
           +  QV A+++     S  V++ + L D+ND  P+    +    I+      Q+V  + AT
Sbjct: 200 YTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRAT 259

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG 133
           D D G N E+ + I  VS   ++ F I+  +G +    KL   + G  +++ V A D G 
Sbjct: 260 DCDQGSNGEVFFEI--VSGNDMNFFSINRINGEVRVKQKLDYEMIG-VFNLLVTAQDKGQ 316

Query: 134 K--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
               +QT V+++++   N  +P F  + +   + E  ++
Sbjct: 317 PFLYNQTTVDIALI-DVNDNAPQFVSSHFQTMIPENYAV 354


>gi|292622519|ref|XP_001921123.2| PREDICTED: neural-cadherin-like [Danio rerio]
          Length = 2555

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 24/195 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
            + ++  LDR+  +   ++F V+A ++ G   +    + V++ DINDNAP          L
Sbjct: 1033 IFAQRRLDREVRS--AWQFLVLATDENGAGLTGFADVLVDVQDINDNAPVFLCATDNCFL 1090

Query: 54   PMIPPIQIQAGEARRQIVKIEATDND---LGVNAEITYSIYH-VSN-TGLHKFRIDPRSG 108
              +P    +   A   I+++ ATD D    G NA +TY I   V N   L+ F I+P +G
Sbjct: 1091 GHVP----ENSPADTSIMEMRATDLDDPKAGKNAILTYRIVQNVRNEINLNLFSINPTTG 1146

Query: 109  VIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
             I T  + +  E   +Y + V+A D GG S      + V+   N   PVF Q  Y  ++S
Sbjct: 1147 TIYTVLRSLDREVVDRYLVVVEARDGGGLSGTGTATI-VISDVNDHPPVFTQRVYMASMS 1205

Query: 166  EGASINSTVATITVS 180
            E   INS V  +  +
Sbjct: 1206 ENLDINSEVMVVAAT 1220



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)

Query: 9   LDRDPP---NPGKFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQI 61
           L R PP      ++   V A +      ++P+S    + V +NDIN+N P         +
Sbjct: 385 LRRSPPPRLRGPQYVLNVTATDDNAAGGALPLSSCAQVIVGINDINNNKPVFDECHNYSV 444

Query: 62  QAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            A     Q     +++++A D D GVN E+ Y I    +     F I+P +GVI T    
Sbjct: 445 NALVLENQPPGTFVLRVQAHDADTGVNGEVKYGIMQ-RDGASPGFTINPDTGVISTAVSF 503

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              +Q  Y+++V ATD   +    I +++V +   N   P F+ + Y   + E   + ++
Sbjct: 504 DREKQREYTLSVTATDQAQEPLIGICQITVLIADQNDNDPKFENSRYQYFLREDTPVGTS 563

Query: 174 V 174
            
Sbjct: 564 F 564



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 10/144 (6%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNA 84
           +QG   +    + V + D+NDNAP     P  +I   E +     ++ + A D D G NA
Sbjct: 847 QQGQPNTDTAYVRVFVTDVNDNAPAFSQ-PVYEISVEEDKEVGFVVITVTANDEDEGANA 905

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEV 142
           ++ Y I   S   +  F ++P  G I    +L     ++Y + + A+D G   +QT+V +
Sbjct: 906 KLRYQI--TSGNTMGTFDVEPEVGTIFIAQRLDYEQVQRYELRLVASD-GKWENQTMVVI 962

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSE 166
           +V+   N  +P+F Q  Y  +V E
Sbjct: 963 NVI-NQNDEAPLFTQTEYHASVME 985



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 23/193 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMI 56
           ++  ENLD +    G F  +V  +       +   ++ VN+ D+NDN P          +
Sbjct: 709 ILVAENLDYE--TTGFFTLRVRVQNVAAVPLASFTTVYVNITDVNDNVPFFMSSTYEATV 766

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P    +  E    + ++ ATD D G++  I Y I    +     F I+  +G+I T    
Sbjct: 767 P----EGAEIGTSVAQVSATDLDSGLHGMINYIILKDQSGDSQFFSINSYTGIIHTRATF 822

Query: 117 IAGEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
              ++  Y I VQ+ D+         G  ++ T      V   N  +P F Q  Y+++V 
Sbjct: 823 DREQKGSYLIEVQSQDSSESARPGQQGQPNTDTAYVRVFVTDVNDNAPAFSQPVYEISVE 882

Query: 166 EGASINSTVATIT 178
           E   +   V T+T
Sbjct: 883 EDKEVGFVVITVT 895



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 97  GLHKFRIDPRSGVIETTGK-LIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
           G   F +D  +G ++TTG+ L   ++Y++TVQA D+ G+   T   + ++ G   R P F
Sbjct: 70  GEDSFEVDQTTGEVKTTGRPLTPSKEYTLTVQAVDSQGRRG-THASLFILAG--FRPPQF 126

Query: 156 QQNTYDVNVSEGASINSTVATI 177
              TY +++ E +++   VA +
Sbjct: 127 TNTTYTIHIPESSAVGQAVAVV 148



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 6/141 (4%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV + D NDN P+           +        ++  A D+D G N+ ITYS+   S  
Sbjct: 531 ITVLIADQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGTNSAITYSL---SQQ 587

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
               F I+P +G I     +    + S  + ATD G +SS   + V ++   + + P ++
Sbjct: 588 NPAYFHINPSTGWIYVNQPISQTSRISQQIIATDGGSRSSSVDLTV-IITNVHNQPPQWE 646

Query: 157 QNTYDVNVSEGASINSTVATI 177
           Q  Y V + E    ++ + TI
Sbjct: 647 QAEYWVTIPENTPRDTKIVTI 667



 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 19/116 (16%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---GEQYSITV 126
           ++++ A D D G+NAE++Y I  V       F I  + GV+  + +L        Y  TV
Sbjct: 247 LLQVLARDCDTGLNAELSYFIQSV------DFDITSQ-GVVSPSQRLDYERPNHMYECTV 299

Query: 127 QATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G     G +S  I   +V    N  +PVF Q  Y   +SE A   + VA +
Sbjct: 300 VAVDKGTPPRTGTASIRIRMANV----NDEAPVFSQTIYKTFLSEDAGPETLVAIV 351



 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 21/180 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAP----RLPMIPPIQIQAGEARRQIVKIEA 75
            R+ V+   + G   S   + T+ ++D+ND+ P    R+ M      +  +   +++ + A
Sbjct: 1162 RYLVVVEARDGGGLSGTGTATIVISDVNDHPPVFTQRVYMAS--MSENLDINSEVMVVAA 1219

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDP----RSGVIETTGKLIAGE----QYSITVQ 127
            TD D G N+ +T+SI  +      KF I+     R G++    K+   +     +++TV+
Sbjct: 1220 TDGDEGENSVMTFSI--IGGDEDRKFFIETDKVNRRGIVRLKKKIDFEKPHERTFNLTVK 1277

Query: 128  ATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDV-NVSEGASINSTVATITVSRLASG 185
              D    S +  I++V      N  +PVF    Y+  ++ E   + + VA +T   L SG
Sbjct: 1278 VEDADFFSLAYCIIQVE---DSNDHTPVFFPQFYEAGSMFEDVPVGTIVAQVTAMDLDSG 1334


>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
           glaber]
          Length = 3767

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 818 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 877

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
           D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 878 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 936

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 937 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 981



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 275 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 327

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 328 QYRETLRENVEEGYPILQLRATDGDAPPNANLHYRFVGPPAARTAAAAAFEIDPRSGLIS 387

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 388 TSGRVDREHMESYELVVEASDQGKEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 447

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 448 DVHPHTVVLRVTAT 461



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 768 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 823

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 824 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 877



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 14/179 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
           +LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E  
Sbjct: 604 SLDRESVE--HYFFGVEARDHGSPLLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDA 660

Query: 66  -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQ 121
                +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+
Sbjct: 661 AVGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQER 716

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           Y   V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 717 YFKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 774



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 51  PRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRID 104
           P+ P      + P    AG A   ++++ A D D G    + YS+  + N+  L  F ID
Sbjct: 214 PKFPQYNYQTLVPENEAAGTA---VLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSID 270

Query: 105 PRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY 160
           P SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  SPVF+Q  Y
Sbjct: 271 PHSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQY 329

Query: 161 ----DVNVSEGASINSTVAT 176
                 NV EG  I    AT
Sbjct: 330 RETLRENVEEGYPILQLRAT 349



 Score = 44.3 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-Q 60
           L+ +   +DR+     +   +   + K+    S  V + + + D NDNAP+      + Q
Sbjct: 385 LISTSGRVDREHMESYELVVEASDQGKEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQ 444

Query: 61  IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
           ++       +V ++ ATD D   N  + Y+I  +S      F ID  +G I+    L   
Sbjct: 445 VREDVHPHTVVLRVTATDRDKDANGLVHYNI--ISGNSHGHFAIDSLTGEIQVVAPLDFE 502

Query: 118 AGEQYSITVQATDTG--------GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           A  +Y++ ++A D G        G +S  +V++      N  +P+F    + V+V E A 
Sbjct: 503 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDI------NDHTPIFVSTPFQVSVLENAP 556

Query: 170 INSTVATI 177
           +  +V  I
Sbjct: 557 LGHSVIHI 564



 Score = 43.9 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 941  PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 997

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V ++   N 
Sbjct: 998  VEGNIPELFQMDIFSGELTALIDLDYEACQEYLIVVQAT-SAPLVSRATVHVRLI-DQND 1055

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1056 NSPVLNNFQILFNNYVSNHSD 1076


>gi|338729307|ref|XP_001500396.3| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Equus
           caballus]
          Length = 1296

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      Q+ KI ATD D G NAEI+Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GID 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 509 APSEFNLDRRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++P      
Sbjct: 624 VIQPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VVPSSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPGTVVFTVVAVDNDTGMNAELRYSIVGGNTKGL--FIIDQTTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VSDLGLHRLVVKAKDLGQPDS 761



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++      +   ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI+    
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDVND----DFTIDPQTGVIQPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P      + + 
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
            P     G +   + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     
Sbjct: 258 IPENAPVGTS---VTQLHATDADIGENAKIQFYFSNLVSNIAKRLFHLNTTTGLITIKEP 314

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           L   E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE 
Sbjct: 315 LDREESPNHKLLVLASDGGLMPARAMVLVNVTDINDNVPSIDIRYIINPING-TVVLSEN 373

Query: 168 ASINSTVATITVS 180
           A +N+ +A ITV+
Sbjct: 374 APLNTKIALITVT 386



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK-- 180

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G   F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 181 --GQSIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|73949373|ref|XP_848994.1| PREDICTED: protocadherin alpha-11 [Canis lupus familiaris]
          Length = 821

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 7/185 (3%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG 64
           K+ LDR+     +F   + A +      +  + L V++ DINDN P        +++   
Sbjct: 199 KKYLDRE--KTPEFNLLLTAADGGKPELTGTIQLFVHVLDINDNDPEFEQSEYKVKLTEN 256

Query: 65  EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
            A+  +V K+ ATD D GVN E+TYS+  +   G   F +D  +G +   G L   E   
Sbjct: 257 AAKETLVIKLNATDPDEGVNGEVTYSLMSIKPNGKLLFTLDKNNGEVRVNGTLDYEENKF 316

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           Y I VQATD G  S      V + +   N  +P     +  + V E A  ++ +A I+VS
Sbjct: 317 YEIEVQATDKGNPSMAGHCTVWIEILDANDNAPEVTITSLSLPVREDAQPSTVIALISVS 376

Query: 181 RLASG 185
              SG
Sbjct: 377 DRDSG 381



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  +V A +K   + +   ++ + + D NDNAP + +     P++  A +    I  I  
Sbjct: 317 YEIEVQATDKGNPSMAGHCTVWIEILDANDNAPEVTITSLSLPVREDA-QPSTVIALISV 375

Query: 76  TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
           +D D G N ++T S+   V    +  F+ +  S V+++     +   Y++ V A D G  
Sbjct: 376 SDRDSGANGQVTCSLTPQVPFKLVSTFK-NYYSLVLDSALDRESVANYALVVTARDGGSP 434

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           S      VSV V   N  +P F Q  Y V V E
Sbjct: 435 SLSATASVSVEVADVNDNAPAFAQPEYTVFVKE 467


>gi|332029953|gb|EGI69778.1| Neural-cadherin [Acromyrmex echinatior]
          Length = 1145

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)

Query: 39   LTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V + D+NDN P      M  P   +       ++K++ATD D GVN ++ YSI    N
Sbjct: 869  VVVFITDVNDNKPVFKDCGMYYPKVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPN 928

Query: 96   TGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                KF +D  +G +  T K+       G+  S+TV+ATD G  S + +   +V +   N
Sbjct: 929  QKGTKFTVDEETGQV-LTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVN 987

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P+F +  Y  NV + ASI + +  ++ S
Sbjct: 988  DNPPLFDRQRYVENVKQDASIGTNILRVSAS 1018



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ ++D+NDNAP+  + P  Q   
Sbjct: 623 LAKELDFEDLRQPHIYSLIVTATEDSG-GFSTSVELTIRVSDVNDNAPKFEL-PDYQAHN 680

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++ATD D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 681 VDEDIPLGTNILKVKATDADSGANAEIEYLVSD------DHFSVD-SNGIIVNNKQLDAD 733

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  S      V +     N   P F Q  Y  NV E A  N+ V 
Sbjct: 734 NNNAYYEFIVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 793

Query: 176 TITVS 180
           T+  S
Sbjct: 794 TVVAS 798



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 7/163 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ- 60
            V++ +  DR+  + GKF    +    QG  +   V S TV + D+NDN P       ++ 
Sbjct: 943  VLTNKVFDREGDD-GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN 1001

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
              Q       I+++ A+D D   N  I YS+   +N   L  F I P SG I    K + 
Sbjct: 1002 VKQDASIGTNILRVSASDEDADNNGAIVYSLSSPNNEQNLEYFEIQPESGWI-VLKKPLD 1060

Query: 119  GEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTY 160
             + Y + V+A+D G    S  +     V   N + PV+  N Y
Sbjct: 1061 RDSYRLRVRASDRGMPVLSADVDVELDVVDRNNKPPVWDANVY 1103


>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3-like [Macaca mulatta]
          Length = 4191

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 998  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1057

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1058 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1116

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1117 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1161



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 455 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 507

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 508 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 567

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 568 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 627

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 628 DVRPHTVVLRVTAT 641



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 917  INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 971

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 972  LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 1030

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 1031 QFVASHYTGLVSEDAPPFTSVLQISAT 1057



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 785 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 841

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 842 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 897

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 898 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 954



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 415 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 474

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 475 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 529



 Score = 43.9 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1121 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1177

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V ++   N 
Sbjct: 1178 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLI-DQND 1235

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1236 NSPVLNNFQILFNNYVSNRSD 1256



 Score = 43.1 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 597 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 654

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 655 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 712

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N   P+F    + V+V E A +  +V  I
Sbjct: 713 VDI------NDHIPIFVSTPFQVSVLENAPLGHSVIHI 744


>gi|195325640|gb|ACF95728.1| cadherin-14/18 [Mustela putorius furo]
          Length = 441

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 56  IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 114

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 115 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALYNM 170

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 171 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVRESAQV 229

Query: 171 NSTVATITVSRLASG 185
            S V  I  +   +G
Sbjct: 230 GSAVGKIKANDADTG 244



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 27/190 (14%)

Query: 8   NLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQA 63
           N+DR+     +  + V+  A++  G    +  S TVN  L D+NDN PR P     Q+  
Sbjct: 169 NMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQ-KHYQLYV 223

Query: 64  GEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKLIA 118
            E+ +    + KI+A D D G NA++TYSI +    G+     D   R G++     L  
Sbjct: 224 RESAQVGSAVGKIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNY 283

Query: 119 GEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            ++  Y++T++  +T         G     T++++ V  G     P+F   +Y + V E 
Sbjct: 284 EKKKSYTLTIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEVYEN 341

Query: 168 ASINSTVATI 177
           A I + V T+
Sbjct: 342 AKIGTVVGTV 351


>gi|71891737|dbj|BAA13407.2| KIAA0279 protein [Homo sapiens]
          Length = 2854

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 172 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 224

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 225 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 284

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 285 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 344

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 345 PGAPVLRVTAS 355



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 712 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 763

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 764 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 820

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 821 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 877



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 492 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYT 547

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 548 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 598

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 599 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 655

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 656 RPAGTTVVLISAT 668



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 662 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 717

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 718 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 776



 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 311 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSI 369

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 370 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 426

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 427 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 458



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 803 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 860

Query: 57  ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 861 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 911

Query: 113 TGKLIAGE--QYSITVQAT 129
              L   +  +Y + +QAT
Sbjct: 912 LVDLDYEDRPEYVLVIQAT 930


>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
          Length = 3282

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 11/193 (5%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           YL+   + LDR+  +   +  +V+A +          S T+ + DINDN P    P+   
Sbjct: 422 YLICVDQILDREERD--TYELRVMATDSGTPPLRAESSFTIQVIDINDNPPLFDQPVYRQ 479

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           +  +       ++++ A D D G N +I+YSI    +     F ID  +G+I T  +L  
Sbjct: 480 VIPEVVFPGSFVLQVTARDKDQGPNGDISYSILQDGSAYYSWFSIDSITGIITTLSQLDY 539

Query: 119 GE--QYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +    SITV ATD GGK   SS  +V +  +   N   PVF++N Y+V++ E     + 
Sbjct: 540 EKNPSPSITVVATD-GGKPSLSSTAVVNI-FLQDINDNEPVFERNFYNVSIEENTGPGTC 597

Query: 174 VATITVSRLASGC 186
           +  +T +   SG 
Sbjct: 598 ILEVTAADADSGS 610



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 6/150 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +LTV + D+NDN+P +P+   I++        I+  + T ND+     ++Y++ H+  + 
Sbjct: 2251 TLTVIIIDLNDNSPMIPLPQKIRVPEDTLIGTIIT-QVTGNDVDSGPALSYTL-HLDASS 2308

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F I    G +  TG L   E+  Y++TV+++D+  +S   +    +V   N  SP F
Sbjct: 2309 QGMFGIHRYGGGVSLTGPLDYEERTWYTLTVRSSDSKHQSEANLT--VLVDDVNDNSPTF 2366

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             Q+ Y V VSE     S V T+T +   SG
Sbjct: 2367 TQDLYQVAVSEHLPAGSAVITVTATDRDSG 2396



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 8/150 (5%)

Query: 41   VNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            + + D+NDN P    +   I++        +  + ATD D G N  I Y I     +G  
Sbjct: 1733 IKVTDVNDNPPVFGRLYYSIEVPENLEALPLFTLRATDQDAGDNGRINYKITAGDPSG-- 1790

Query: 100  KFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVF 155
             FR+D +SGV+ T+  L   ++  YS+TV A D G    SS   VEV +V   N  SP F
Sbjct: 1791 DFRLDGQSGVLSTSRPLDREKRPGYSLTVIAQDQGHPPLSSTATVEV-IVLDINDHSPQF 1849

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
            Q ++Y   + E   I S V  +    L  G
Sbjct: 1850 QSSSYTAEILEDVPIGSLVLEVKAIDLDHG 1879



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LTV ++D+NDN+P        Q+   E   A   ++ + ATD D G N +ITY +   S 
Sbjct: 2352 LTVLVDDVNDNSPTFTQ-DLYQVAVSEHLPAGSAVITVTATDRDSGDNGKITYRVMS-ST 2409

Query: 96   TGLHKFRIDPRSGVIETTGKL-IAGEQYSITV--QATDTGGKSSQTIVEVSV-VPGPNTR 151
             G+  F IDP +G + T  K     E  SI V  +A D G  S   I  V V V   N  
Sbjct: 2410 KGV--FYIDPVNGTLFTKQKTEFDFENPSILVVIEARDQGTPSLSAIATVHVQVSDINDN 2467

Query: 152  SPVFQQNTYDVNVSEGASINSTV 174
            +P+F Q+ Y   VSE     STV
Sbjct: 2468 APIFHQSEYRATVSEDGLPGSTV 2490



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 7/150 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDL 80
            V A + QG  A  PVS+ V   DINDN P  P+ +    I+  + +  +V  + A D+D 
Sbjct: 2663 VQATDGQGHFALAPVSIEVK--DINDNRPFFPLNLVTASIRENQPQNALVTMLHAIDHDR 2720

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQT 138
            GV  ++ Y +      G   F I+  SG I T       +   +     A D G  S+  
Sbjct: 2721 GVFGQLRYYMLDSFKEGKEGFFINHTSGEIRTRSSFDFEKLNSFQFMAMAVDAGNYSATV 2780

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             V+V V  G +   PVF  + +   V EGA
Sbjct: 2781 TVKVYVT-GEDEYDPVFTSSEFLFEVPEGA 2809



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 21/181 (11%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEA 75
            K R  V+  E   +++ + V+L   L D+NDN PR  +   +    +A      I+++ A
Sbjct: 2129 KLRL-VVKAETASSSSYMAVNLI--LQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAA 2185

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG 132
             D D G N ++TYSI   S +GL  F+IDP +G + TT  ++  E   Q  + V ATD G
Sbjct: 2186 DDRDQGQNGQVTYSIRSSSMSGL--FKIDPLTGSV-TTAAIMDREIWTQTKLVVTATDRG 2242

Query: 133  -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
                 G ++ T++ + +    N  SP+       + V E   I + +  +T + + SG A
Sbjct: 2243 TPRLAGSATLTVIIIDL----NDNSPMIPL-PQKIRVPEDTLIGTIITQVTGNDVDSGPA 2297

Query: 188  I 188
            +
Sbjct: 2298 L 2298



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 13/179 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAPRL---PMIPP 58
            +++   LDR+      + F+V A +       +    +T+ + D+NDNAP     P+I  
Sbjct: 1905 IITASPLDRE--RTASYTFEVCATDSSPANPRNSTAQVTIYIQDVNDNAPFFIQDPLIVN 1962

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
            +   +   RR +  + A D D G N  +    Y  +N  +  F I+  +G I+ T KL  
Sbjct: 1963 VSASSVSNRRVLATMRAEDKDFGANGSV---FYRFANP-VRGFTINSLTGEIQATEKLQT 2018

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTV 174
            +   Q ++ VQA D G  +  ++  V +     + S + F +   DV++ E A+  + V
Sbjct: 2019 MTQSQRTLIVQAMDQGNPAQSSLGVVIIYIKEQSYSGIRFSRTARDVSLQENAAKGTVV 2077



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 14/179 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA- 66
           LDRD   P  F F V A +  G ++   V   V+L DINDN P   P+   + +    A 
Sbjct: 645 LDRDQ-GPASFDFTVTAVDGGGLSSVAYVR--VDLVDINDNRPAFYPLSYAVSLSTQSAP 701

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-- 124
              +V++ A D D G N  ITY    V       F ++  +GVI  + + + G+  S+  
Sbjct: 702 GTSVVRVTAYDPDSGKNGRITYKT--VPGGASPYFTLNKDTGVISLS-RSVYGKANSVIP 758

Query: 125 -TVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             + A D GG  +     V +SVV G     PVF++  Y   VSE     + V  +  S
Sbjct: 759 MVISAQDGGGLVALVNARVNISVVAGL-VAPPVFEKTQYYFTVSEDVLRGTVVGIVQAS 816



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
            V+  V + D NDN P    I P  +   E +     ++ + A D D G N  +TY I   
Sbjct: 1523 VTARVYVTDENDNPPVF--ISPTAVSVMEDQPVGFVVLYVMARDADQGENGRVTYRIQSG 1580

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
            +  G   F ++P +G +     L   EQ  +++TV A D G    SS  ++ V V+   N
Sbjct: 1581 NTAG--TFSLNPSTGSLSIFKPLDREEQDIFNLTVIAEDHGIPQHSSIQLLCVHVI-DVN 1637

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               P F+Q+ Y+V +SE     ++V T++ + L  G 
Sbjct: 1638 DEVPWFEQSQYEVEISENQPPGTSVLTVSAADLDQGS 1674



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAG---EARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + + D+NDN P         +      E    + +++A D D GVN ++T+ +   S+ G
Sbjct: 882  ITIADVNDNPPVFLPSSSESLLLPENTEMGTVVYRVQAEDRDSGVNGQLTFDL--SSSNG 939

Query: 98   LHK-FRIDPRSGVIETTGKLIAGE--QYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSP 153
            L + F ++  SG I   G L      +Y + V   D+G  + S T   V  V   N + P
Sbjct: 940  LQRIFSVERSSGEIRLVGSLSYENTPRYDLQVITKDSGVPQLSATFTLVVHVQAENDQGP 999

Query: 154  VFQQNTYDVNVSEGASINS 172
            VF   TY V + EG  I++
Sbjct: 1000 VFDTLTYRVELKEGTPIST 1018



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            ++SVP+ ++V   D NDN P         I  +   A  +I+ + ATD D   N+E+ YS
Sbjct: 2569 SSSVPIIISVT--DANDNPPVFSRTEYSVILSEGTAAGTEILHLSATDPDSAPNSEVRYS 2626

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTGGKSSQTIVEVSV-VP 146
            I     T L  F +D  +G +     L +  Q S  I VQATD  G+    +  VS+ V 
Sbjct: 2627 ISSGDETNL--FHVDQWTGALRLQRPLNSETQLSHLIVVQATD--GQGHFALAPVSIEVK 2682

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P F  N    ++ E    N+ V  +
Sbjct: 2683 DINDNRPFFPLNLVTASIRENQPQNALVTML 2713



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 17/157 (10%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           ++L + + DINDNAP     R   I    +Q G     I+++ ATD D G N  + Y I 
Sbjct: 239 MTLDITVQDINDNAPVFNQSRYHAIISENLQPGS---NILQVFATDVDEGDNGMVLYEIN 295

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPG 147
              +     F ID R+G+I T  K +  E    + + VQA D       T   V++ V  
Sbjct: 296 RRQSDPDRYFVIDSRTGII-TLNKPLDFEMRRVHELVVQAQDNATHPEVTNAFVTIHVRD 354

Query: 148 PNTRSP----VFQQNTYDVNVSEGASINSTVATITVS 180
            N   P    +F        +SEGA     VA I+V+
Sbjct: 355 YNDNQPTMTIIFLSEDGSPRISEGAQPGQYVARISVT 391



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 33/183 (18%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+   PG +   VIA+++     S   ++ V + DIND++P        Q Q+     
Sbjct: 1807 LDREK-RPG-YSLTVIAQDQGHPPLSSTATVEVIVLDINDHSP--------QFQSSSYTA 1856

Query: 69   QI----------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            +I          ++++A D D G N+++ Y + H S +    F ID  +G I T   L  
Sbjct: 1857 EILEDVPIGSLVLEVKAIDLDHGPNSQVLYFLSHGSQS---MFMIDQNTGRIITASPLDR 1913

Query: 119  GE--QYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 Y+  V ATD+        ++Q  + +  V   N  +P F Q+   VNVS  +  N
Sbjct: 1914 ERTASYTFEVCATDSSPANPRNSTAQVTIYIQDV---NDNAPFFIQDPLIVNVSASSVSN 1970

Query: 172  STV 174
              V
Sbjct: 1971 RRV 1973



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 28/199 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            + +K+  + D  NP      VI    QGT + S   ++ V ++DINDNA   P+    + 
Sbjct: 2422 LFTKQKTEFDFENPSIL--VVIEARDQGTPSLSAIATVHVQVSDINDNA---PIFHQSEY 2476

Query: 62   QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE----- 111
            +A     G     ++ +EA D DL +     +     S    + F+I+     +E     
Sbjct: 2477 RATVSEDGLPGSTVLILEAVDGDL-LRDNCGFDFAIASGNSGNAFQIESSVRFLEGRGFQ 2535

Query: 112  TTGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            T G LI  E+        Y++TV  +D G   +SS   + +SV    N   PVF +  Y 
Sbjct: 2536 TVGSLILVEKLDFEAVPSYNLTVVVSDRGIPQRSSSVPIIISVTDA-NDNPPVFSRTEYS 2594

Query: 162  VNVSEGASINSTVATITVS 180
            V +SEG +  + +  ++ +
Sbjct: 2595 VILSEGTAAGTEILHLSAT 2613



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 18/169 (10%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMI-PPIQIQAGEARRQIVKIE-ATDNDLGVNAEITY 88
           T   V V +T+ +NDIND+AP+ P      +I    A      +E A D+D G   ++T 
Sbjct: 121 TMTGVTVEVTIKVNDINDHAPKFPRKQATFKIPEQTAIGTRFPLEPAVDSDKG---QLTT 177

Query: 89  SIYHVSNTGL-HKFRIDPRSG---------VIETTGKLIAGEQYSITVQATDTGG--KSS 136
             Y + +  +   F ++ R G         V+ T         Y+++++A D G   ++ 
Sbjct: 178 QGYLIKDGNVGQAFTLETRRGSNEVLYLDLVVNTILDREKRSTYTLSLEAFDGGSPKRTD 237

Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           Q  ++++ V   N  +PVF Q+ Y   +SE     S +  +  + +  G
Sbjct: 238 QMTLDIT-VQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDVDEG 285


>gi|195496048|ref|XP_002095528.1| GE19644 [Drosophila yakuba]
 gi|194181629|gb|EDW95240.1| GE19644 [Drosophila yakuba]
          Length = 3884

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ D+NDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 2453 TVAVNILDVNDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 2512

Query: 96   TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 2513 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGSPPLSNNAYVNISIL-DINDN 2569

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SP F QN Y +NV+E   + S +  I
Sbjct: 2570 SPKFLQNLYRINVNEDIFVGSKILDI 2595



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQA 63
           ++  LDR+  N  +   +V   +      S    + V++ DINDN P     +  +Q+ +
Sbjct: 448 TERKLDRE--NQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNGPEFDQRVYKVQVPS 505

Query: 64  GEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
             A  Q I ++ A D+D G N  ITYSI   S  G +KFRID + G I     L +  ++
Sbjct: 506 SAAVNQSIYQVHAIDSDSGENGRITYSIK--SGKGKNKFRIDSQRGHIHIAKPLDSDNEF 563

Query: 123 SITVQATDTG-GKSSQT 138
            I ++A D G  K SQT
Sbjct: 564 EIHIKAEDNGIPKKSQT 580



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
            KF F  I     G   S P+S    + +++ DINDN+P+  +    +I   E      +I
Sbjct: 2537 KFYFLTIQAIDGG---SPPLSNNAYVNISILDINDNSPKF-LQNLYRINVNEDIFVGSKI 2592

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            + I+ATD D  VN  +TY+I    N G  +F I+P++G I  +  L       Y++ +QA
Sbjct: 2593 LDIKATDEDSDVNGLVTYNIEKGDNIG--QFSIEPKNGTISVSRPLDRETISHYTLEIQA 2650

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G       V +++ +   N  +P+F    Y V + E   +     T  +S
Sbjct: 2651 CDQGNPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRRLGYIFLTFKIS 2703



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20   RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            +++++A  + G   +      + + +NDINDN P   M      +P    +  +    I 
Sbjct: 2329 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNTPIFSMAQYRVSVP----EDAQLNTLIT 2384

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
            K+ A D D G+N +I YS+   ++     F+I   +G+I     L       +++TV+A 
Sbjct: 2385 KVHAMDKDFGLNRQIKYSLMGENHD---YFKISKSTGIIRLDKSLDRETISLFNLTVKAE 2441

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G     +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 2442 DCGVPKLHSIATVAVNILDVNDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 2498



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           + VN++D ND+ P     +I     ++     ++ ++ A D D G NAEI YSI    N 
Sbjct: 793 IIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSII-TGNV 851

Query: 97  GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
           G   F IDP  GVI   G L     ++Y + V+A D G    SSQ  V + V    N   
Sbjct: 852 G-SVFEIDPTFGVITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSEND-P 909

Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
           P F  N   + + E   I + V  +T
Sbjct: 910 PRFSTNNIAIEIFENLPIGTFVTQVT 935



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
           LDR+  +   +   + A++      S    + V ++D+NDNAP   +   I +++    R
Sbjct: 133 LDREKQDI--YALHITAKDGGNPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPR 190

Query: 68  RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
             ++  IEA D D+G NAEI +S+   +      FRID  +G I T G L    +  +++
Sbjct: 191 GTVLAVIEAVDEDIGPNAEIQFSLKEETQDK-ELFRIDKHTGAIRTQGYLDYENKQVHNL 249

Query: 125 TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            V A D G     S  +IV + +    N  +P F    Y+  + E     + V  +T
Sbjct: 250 IVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKIKENKPKGTFVMNVT 306



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 11/169 (6%)

Query: 18   KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKI 73
            K+   V+  +  G+ + S   ++ + + D+NDN P    + P    ++     R Q V +
Sbjct: 1608 KYHHVVVNVKDHGSPSLSSRSNVFITVKDLNDNTP--CFVEPSYFTKLSVAAVRGQFVAL 1665

Query: 74   -EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             +A D D+     + Y I  V    L  + ID  +GVI     L   ++ S  +  + + 
Sbjct: 1666 PKAYDKDISDTDSLEYKI--VYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSD 1723

Query: 133  G-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  ++   +++S++P  N  SP F Q+TY+  V E       + T+  S
Sbjct: 1724 GVHTTYARLKISLMP-ENVYSPQFDQSTYEAQVPENLLHGHNIITVKAS 1771



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 9   LDRDPPNPGKFRFQV--IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           LDR+  N       V  +    + T+  +P+++     D+NDN P +            A
Sbjct: 30  LDRERQNEYVLNITVYDLGSPTKSTSKMLPITIL----DVNDNRPVIQKTLATFRLTESA 85

Query: 67  RRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
           R   V   + ATD D G+NA++TY++    +     F ++  +G I     L   +Q  Y
Sbjct: 86  RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCIRLNKPLDREKQDIY 141

Query: 123 SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ + A D G    SS+ +V V +V   N  +PVF    Y   V E     + +A I
Sbjct: 142 ALHITAKDGGNPVLSSEALVYV-LVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVI 197



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 18/153 (11%)

Query: 22   QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
            Q + RE+Q           ++VPV      + +++ D NDN P+           +  E 
Sbjct: 2011 QTLDREQQESHTLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 2070

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               +VK+ ATD D G N +I Y +   +    + F ID  +G I     L      +Y+ 
Sbjct: 2071 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYTGWITLLTSLDREVQSEYNF 2130

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQ 156
             V A D G       V V++ +   N  +PVF+
Sbjct: 2131 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK 2163



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 15/144 (10%)

Query: 39   LTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + +++ D+NDN P    +P    + I   +    I++++A D D   N E+ Y +    N
Sbjct: 1321 IDISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYELKK-GN 1378

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
              L  F++D ++G + +  + + G    Y +TV A D      SS   ++V V+   +  
Sbjct: 1379 GEL--FKLDRKTGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSDAPLQVKVI---DRS 1432

Query: 152  SPVFQQNTYDVNVSEGASINSTVA 175
             PVF++  Y VNV E   + S ++
Sbjct: 1433 MPVFEKQFYTVNVKEDVEMYSALS 1456



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP 146
             +++ +  +H+ FRI+P +GVI   G +   + + +++TV+ T+   +SS   + + ++ 
Sbjct: 943  FFNIISGNIHESFRINPSTGVIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIHILD 1002

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P F QN Y   +SE A+I S V  +
Sbjct: 1003 A-NDNIPYFVQNEYVGELSESAAIGSYVLKV 1032



 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 37   VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
            V L+V++ D+ND  P +   M      +      QI+KI ATD D G NA+++Y I  + 
Sbjct: 1520 VVLSVSILDVNDCYPEIESDMYNITIPENSSFGTQILKINATDKDSGANAKLSYYIESIN 1579

Query: 94   --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +N+ L  F ID   G   ++T       + + + V   D G  S  +   V + V   
Sbjct: 1580 GQNNSEL--FYIDVTDGNLYLKTPLDYEQIKYHHVVVNVKDHGSPSLSSRSNVFITVKDL 1637

Query: 149  NTRSPVFQQNTYDVNVSEGA 168
            N  +P F + +Y   +S  A
Sbjct: 1638 NDNTPCFVEPSYFTKLSVAA 1657


>gi|257196299|gb|ACV49903.1| protocadherin gamma b3 [Anolis carolinensis]
          Length = 226

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 6/114 (5%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
           +++ VN+ DINDNAP        ++   E       +++++A+D+D G+NAEITY+   +
Sbjct: 22  LNIRVNVTDINDNAPVFSQ-AMYKVSLKENVPIGMSVLQVKASDSDEGLNAEITYTFSDI 80

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
             T  HKF++DP++G I     +    Q  Y + +QA+D  G  +   VE+ V+
Sbjct: 81  QETAEHKFQLDPKNGTITLLESIDFENQKNYVMIIQASDGSGLVAHCNVEIDVL 134


>gi|402872877|ref|XP_003900321.1| PREDICTED: protocadherin beta-13, partial [Papio anubis]
          Length = 603

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 10/187 (5%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q 
Sbjct: 1   VLDKALDREAE--AELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQI 57

Query: 64  GEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
            E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G IE   +L    
Sbjct: 58  SEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEK 117

Query: 120 -EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + Y + ++A D G  S +  + + V+   N  +P    + +   + E A   + VA  +
Sbjct: 118 LQSYEVNIEARDAGTFSGKCTILIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALFS 175

Query: 179 VSRLASG 185
           VS L SG
Sbjct: 176 VSDLDSG 182



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y ++++  LDR+  + G++   +   +         +++TV + D+NDNAP         
Sbjct: 206 YTLLTERPLDRE--SRGEYNITITVTDLGTPMLKTQLNITVLVADVNDNAPAFTQTSYTL 263

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIY-----HVSNTGLHKFRIDPRSGVIETT 113
              +       I  + ATD D G NA++TYS+      H+S T L     D        +
Sbjct: 264 FVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLSLTSLVSINADNGHLFALRS 323

Query: 114 GKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
               A + +   V A+D G    SS+ +V V V+   N  SP 
Sbjct: 324 LDYEALQGFEFRVGASDRGSPALSSEALVHVLVLDA-NDNSPF 365


>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
          Length = 4971

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L D+NDN P  P   +   I+   G+  + I+++ ATD D G NA +TY+I   ++  
Sbjct: 1704 ITLQDVNDNPPVFPNDILDVTIEENVGDGFK-IMQLTATDADEGPNALVTYTIISGAD-- 1760

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T KL      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1761 -DSFRIDPESGDLIATKKLDRERRSKYSLLVRA-DDGKQSSDMTLNIT-VKDVNDHTPKF 1817

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             + TY  ++ E     S VA I  S   SG
Sbjct: 1818 SRATYSFDIPEDMVPGSIVAAILASDSDSG 1847



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 16/176 (9%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVK 72
            G ++ +V+AR  + T  +    + + + D+NDNAP    I  ++    ++       I +
Sbjct: 836  GFYQLKVVARAGEITGEAF---VNITVKDLNDNAPHF--IHTVEHVSAVENWSTGHVIFQ 890

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDT 131
             +A+D D G N  + YS+   +  GL  F I  + G+I  TG L I    Y I V A+D 
Sbjct: 891  AKASDPDEGANGMVVYSLKQ-NPKGL--FHIHEKHGLITLTGPLEITTSSYEIEVSASDM 947

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G    +S  I+ VSV    N  SPVF Q +Y+V + E   +NS    +  +   SG
Sbjct: 948  GVPQHTSSLILIVSVY-DVNDNSPVFDQLSYEVIILESEPVNSRFFKVEATDKDSG 1002



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRLPMIPPI 59
            +++   LDR+  +   ++  V+A +    +G ++S  VS+TV   DINDN PR    P +
Sbjct: 2393 IITSSLLDRE--DRANYQLLVVATDGGQPEGLSSSATVSVTVA--DINDNPPRFHHHPYV 2448

Query: 60   -QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              I A  A   +V  +  TD D G NA++ YS+         KF+IDP  G I    +L 
Sbjct: 2449 THIPASTAAGSLVFAVTVTDEDSGSNAQLHYSLM---GRNAEKFKIDPVRGAITANERLT 2505

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               + ++TV+  D G         V+V        PV +         E    N  V T+
Sbjct: 2506 GNSEVTLTVRVKDGGANPKTDTTTVTVRFVTGGNFPVIKLRERAFTFPESQPSNHIVTTV 2565

Query: 178  TVSRLASG 185
            T S +  G
Sbjct: 2566 TGSSMRGG 2573



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 18/182 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
            +++ + LDR+     + ++ ++ R   G  +S  ++L + + D+ND+ P+          
Sbjct: 1772 LIATKKLDRE----RRSKYSLLVRADDGKQSS-DMTLNITVKDVNDHTPKFSRATYSFDI 1826

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  +  G     +  I A+D+D GVN E+TY +          F ++P +G    T  L 
Sbjct: 1827 PEDMVPGSI---VAAILASDSDSGVNGEVTYLLEEDDED--ETFLLNPVTGFFNVTRPLD 1881

Query: 118  AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q  Y +T +A D GG++S   V  +V+   N  +P+F   TY  +VSE     S++ 
Sbjct: 1882 YETQQYYILTAKAQDGGGQASTVRVYFNVL-DVNDNAPIFNTTTYSTSVSESLPPGSSII 1940

Query: 176  TI 177
            T+
Sbjct: 1941 TV 1942



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 17/167 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EA 66
            LDR+      +   V+A +K     S  + +T+ + D+NDN P     I  I+I+     
Sbjct: 2088 LDRE--ELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENILT 2145

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               ++++ A+D D G N +I +SI    NT    FRID  +GVI    +L   A   YS+
Sbjct: 2146 GTDVIQVFASDADEGTNGQIRFSISG-GNTN-SDFRIDSVTGVISVAKQLDREARSSYSL 2203

Query: 125  TVQATDTGG-----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             VQA D G      +++  IV + V    N  SPVF+ + Y VNV E
Sbjct: 2204 VVQAADRGSSPRVDRATVNIVLLDV----NDCSPVFELSPYTVNVQE 2246



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQ--IQAGEARRQIVK 72
            +   +V A +    A +  VS+T+++ D+NDN P        P +Q  + +G     ++K
Sbjct: 3135 QHELRVSATDGGWIAKTSYVSVTIHVTDVNDNPPVFDPDEYFPIVQENVPSGTT---VIK 3191

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + ATD D G NA + Y I   S++ L  F IDP +G I T G L   A + Y +TV+A +
Sbjct: 3192 LNATDLDSGANAVMAYVI-QSSDSDL--FVIDPNTGTITTQGFLDYEAKQVYHLTVKAFN 3248

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               +   +   V++ + G N   P F    Y   +SE A   + V  +  S    G
Sbjct: 3249 VPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISESAPKGTVVGEVFASDRDQG 3304



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 9/166 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +  ++IA +      S    L++++ D NDN+P  P    + +   E  R    +  +  
Sbjct: 1257 YSLKIIAVDAGAVPLSSSCMLSISILDENDNSPIFPK-SSLSVDVLENMRIGELVASVTG 1315

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD D G NA+ITYSI   +N G   F I P +G I    KL    Q  Y + + A D G 
Sbjct: 1316 TDADSGQNADITYSITATNNHG--TFSISPNTGSIFLVKKLDFETQSFYKLNITAKDNGR 1373

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                + + V + V   N   PVF       ++ E   I+++V TIT
Sbjct: 1374 PPRSSSIPVVIHVRDFNDNPPVFTPGDIFKSIPENLPISASVMTIT 1419



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 29/168 (17%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIY 91
           + + V + DINDN P   +    Q Q            I++I A+D D G NAEI Y + 
Sbjct: 219 MQVNVTIQDINDNPP---IFEQDQYQTSVFEDAAVGSSILEITASDQDEGANAEIRYFLD 275

Query: 92  HVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTG-----GKSSQTIVEVSV 144
             +      F+IDP++G  +I+ +    + ++YS+T+ A D G     G++  TI  + V
Sbjct: 276 EGT-----PFQIDPKAGTIIIKESLDYESKKEYSLTIHAVDNGVPSLSGRTEATIKLLDV 330

Query: 145 VPGPNTRSPV-----FQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
               N   PV     F   +   +V E A I + VA +TVS   S  A
Sbjct: 331 ----NDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDADSSTA 374



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 7/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDL 80
           I+ + QG    +  + L VN+ D+ND  P           ++   A  ++V + A+D+DL
Sbjct: 528 ISAKDQGLQPKISYTKLIVNITDVNDQVPTFTQSTYHVSLVEHAPAGTELVVLSASDDDL 587

Query: 81  GVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           G N  I +S    +   + + FR+D  SG + T  +L   +Q  Y + +QA D G     
Sbjct: 588 GANGTIRFSFDAETPASVQELFRLDVVSGRLSTAVELDREDQASYLLHIQAADAGSPPLH 647

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ +V++ +   N   PVF    Y  NV E     S V T++ +
Sbjct: 648 SVGKVNITLWDINDNRPVFYPVQYFANVKENEPSGSYVTTVSAT 691



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 16/149 (10%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSN 95
           + L DINDN P   +  P+Q  A     +     +  + ATD DLG N  + Y I    +
Sbjct: 654 ITLWDINDNRP---VFYPVQYFANVKENEPSGSYVTTVSATDPDLGRNGTVKYFITAGDS 710

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQT--IVEVSVVPGPNTR 151
           +   KFRI+  +G I T   L   E+  Y + V A D  G  S T  IV V+V+   +  
Sbjct: 711 S---KFRINSNTGKITTLVPLDREEKTAYQLQVTAADGSGLRSHTPAIVTVTVIDTQD-N 766

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
            PVF Q  Y   + E   + + + T++ +
Sbjct: 767 PPVFSQKVYSFVMFENVGVGTVIGTVSAT 795



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKI 73
            F+ ++ A +K     S   ++++ + + N + P     ++    P  +  G A R    +
Sbjct: 3031 FQIKITASDKGNPPLSAQTTVSIAVTEENHHTPEFSQSQISATVPESLAVGTAIR---TL 3087

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             A D D  +N  ITY+I   ++ GL  F ++ R+GV+     L   E  Q+ + V ATD 
Sbjct: 3088 SARDKDKEMNGLITYNITSGNDKGL--FALNSRTGVLSLAHPLDFEEKQQHELRVSATDG 3145

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC-AIM 189
            G  +  + V V++ V   N   PVF  + Y   V E     +TV  +  + L SG  A+M
Sbjct: 3146 GWIAKTSYVSVTIHVTDVNDNPPVFDPDEYFPIVQENVPSGTTVIKLNATDLDSGANAVM 3205



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 15/158 (9%)

Query: 32  AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
           A S   SL + +NDIND+ P     +  + I     +   +K + ATD D G NA + YS
Sbjct: 432 ARSSFASLVIFVNDINDHPPIFQETVYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYS 491

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK----SSQTIVEV 142
           +  VS   L  F I   SG++ +   L   IA E   + + A D G +     ++ IV +
Sbjct: 492 L--VSGNALGWFSISENSGLVTSAALLDREIASE-IVLNISAKDQGLQPKISYTKLIVNI 548

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           + V   N + P F Q+TY V++ E A   + +  ++ S
Sbjct: 549 TDV---NDQVPTFTQSTYHVSLVEHAPAGTELVVLSAS 583



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 18/187 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            E LDR+     K+   + A +    + S   ++TV ++D+NDN P     +     ++  
Sbjct: 2296 ETLDREVQE--KYILLITATDSGTPSLSGTGTVTVMVDDVNDNVPVFTSSIFHTTIMEDA 2353

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGEQ-- 121
                 ++ + ++D D+GVN  I       S TG H +F I+P +G I T+  L   ++  
Sbjct: 2354 PTGTDVLLVNSSDADVGVNGVI-------SLTGGHGQFSINPATGQIITSSLLDREDRAN 2406

Query: 122  YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + V ATD G   G SS   V V+V    N   P F  + Y  ++    +  S V  +T
Sbjct: 2407 YQLLVVATDGGQPEGLSSSATVSVTVA-DINDNPPRFHHHPYVTHIPASTAAGSLVFAVT 2465

Query: 179  VSRLASG 185
            V+   SG
Sbjct: 2466 VTDEDSG 2472



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 7/172 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEAT 76
            K+   + AR++     S    L + + D+NDN P     P   +I      + ++ + A 
Sbjct: 2610 KYVLWIEARDQGFPPYSSYEKLEITVLDVNDNHPVFDKDPFHAEILENLPPKGVLMVSAV 2669

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y+I  +     + F I+  +G I TT  L   +   Y++ V+ATD G  
Sbjct: 2670 DLDSGPNGQLEYAI--IEGNKENSFSINRATGEIRTTRPLDREKVALYTLKVKATDRGLP 2727

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               TIV+V + V   N  +P F +  +   V+E A +  TV  +T +   +G
Sbjct: 2728 PKNTIVKVLINVLDVNDNAPRFSK-IFSATVAENAPVGYTVTRVTTTDEDAG 2778



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 10/171 (5%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIV 71
            N  +  F V A ++         ++ VN+ D NDN P         P+        R + 
Sbjct: 2921 NINRHSFIVTASDRALKPLMSETTVIVNIVDSNDNPPEFNSPSYFTPVTKSVKVGTRLLR 2980

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQAT 129
             +     D G+N+E+ Y +        +KF++D  SG I     L +   + + I + A+
Sbjct: 2981 VVAQDKKDFGLNSEVEYLM--TGGNSSNKFKLDKTSGWITVASSLTSDMNKIFQIKITAS 3038

Query: 130  DTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    S+QT V ++V    N  +P F Q+     V E  ++ + + T++
Sbjct: 3039 DKGNPPLSAQTTVSIAVTE-ENHHTPEFSQSQISATVPESLAVGTAIRTLS 3088



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 19/168 (11%)

Query: 34  SVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNA--EITY 88
           + P  + + + DINDN+P  P   ++   +  A   R Q++   ATD+D+G N     TY
Sbjct: 101 TYPTEVRIVVLDINDNSPVFPDASIVVSFKEDASSGR-QVILDTATDSDIGSNGVDHTTY 159

Query: 89  SIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQT 138
            I  V      KFR+D     SG      + +TG L       Y + ++  D G      
Sbjct: 160 RI--VKGNEQRKFRLDITVNPSGEGAFLHLVSTGGLDREVTPFYQLLIEVEDKGEPKKFG 217

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            ++V+V +   N   P+F+Q+ Y  +V E A++ S++  IT S    G
Sbjct: 218 YMQVNVTIQDINDNPPIFEQDQYQTSVFEDAAVGSSILEITASDQDEG 265



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 7/132 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTG 97
            +++ L D+ND  P         IQ       +V   +ATD D G N+ + YS+       
Sbjct: 2013 VSIILLDVNDCPPTFTSQKMTYIQENTPVDTVVFTTQATDADSGPNSYVEYSLRGPFG-- 2070

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS-VVPGPNTRSPV 154
             +KF I    G +   G+L   E   Y++TV ATD G     + ++V+ VV   N  +P 
Sbjct: 2071 -NKFSIGTIDGDVRLIGELDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPS 2129

Query: 155  FQQNTYDVNVSE 166
            F QN YD+ + E
Sbjct: 2130 FSQNIYDIEIEE 2141



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 9/147 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V + +N+ D+NDNAPR   I    + +       + ++  TD D G NA    S Y +++
Sbjct: 2733 VKVLINVLDVNDNAPRFSKIFSATVAENAPVGYTVTRVTTTDEDAGSNA---ISRYSITD 2789

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            T L  F I+P +G I  +  L   +   Y + V A D+G   S  +     +   N  +P
Sbjct: 2790 TSL-PFNINPNTGDITISRPLNREDTNHYIVKVSAHDSGWTVSTDV--TVFITDINDNAP 2846

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F + +Y ++  E   + S V  ++ +
Sbjct: 2847 RFSRPSYYLDYPELTEVGSLVTRVSAT 2873



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 8/144 (5%)

Query: 39   LTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L V++ D+NDN+P    +    I +++     +  K+EATD D G+N EI Y I    NT
Sbjct: 958  LIVSVYDVNDNSPVFDQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDIAG-GNT 1016

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTRSP 153
            G   F I P  G +    +L     ++Y++ V A D   +     V V+V+    N   P
Sbjct: 1017 G-DVFGIFP-DGQLYIKAELDREIQDRYNLVVTAKDRAVEPLSATVNVTVILDDVNDNRP 1074

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            +F    Y  +  E     S V  +
Sbjct: 1075 LFNSTNYVFHFEEEQKRGSLVGQV 1098



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 12/147 (8%)

Query: 39   LTVNLNDINDNAPRL----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN P       ++    I  G     +V   A D D G N E+ Y +    
Sbjct: 1491 VTIWVTDLNDNVPTFVSQNALVAEPNIVIGSILTTVV---AFDPDDGANGEVEYELVEGD 1547

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            +     F +D  SG I    +L+     Y++TV ATD G     +  E++++       P
Sbjct: 1548 S---DTFIMDRYSGDIRLASQLVPSRLMYTLTVSATDHGTDRKTSRTELTIIL-QGVDGP 1603

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF Q  Y   + EG    + V ++  S
Sbjct: 1604 VFSQPKYITILKEGQPPGTNVISLDAS 1630



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 7/147 (4%)

Query: 40   TVN--LNDINDNAPRLPMIPP---IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            TVN  L D+ND +P   + P    +Q       + I+++ A D+D G N +++Y +   +
Sbjct: 2220 TVNIVLLDVNDCSPVFELSPYTVNVQENLENLPKNILQVIARDDDQGANGQLSYMLSGGN 2279

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
            + G        +  + ET  + +  E+Y + + ATD+G  S      V+V V   N   P
Sbjct: 2280 DEGAFTLSSSGQLSLTETLDREVQ-EKYILLITATDSGTPSLSGTGTVTVMVDDVNDNVP 2338

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF  + +   + E A   + V  +  S
Sbjct: 2339 VFTSSIFHTTIMEDAPTGTDVLLVNSS 2365



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 19/123 (15%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
            ++  + A++      S  + + +++ D NDN P          +P   PI          
Sbjct: 1362 YKLNITAKDNGRPPRSSSIPVVIHVRDFNDNPPVFTPGDIFKSIPENLPIS-------AS 1414

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++ I A D D  +N  + YSI      G H F IDP +G+I T+ ++       + +T++
Sbjct: 1415 VMTITAQDTDADINGLLQYSIVQQIPRGNH-FSIDPSTGLIYTSKEIDREFSNLFELTIK 1473

Query: 128  ATD 130
            ATD
Sbjct: 1474 ATD 1476



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 19/164 (11%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            ++      +  +V   +TV + DINDNAPR   P       +  E    + ++ ATD D 
Sbjct: 2818 IVKVSAHDSGWTVSTDVTVFITDINDNAPRFSRPSYYLDYPELTEVGSLVTRVSATDPDE 2877

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----------IAGEQYSITVQATD 130
              N +I Y I   S      FRI+  +G I    +L          I   ++S  V A+D
Sbjct: 2878 DFNGKIFYFIRSQS----EYFRINASTGEIFVKQQLKYQNSTGASSININRHSFIVTASD 2933

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
               K   S+T V V++V   N   P F   +Y   V++   + +
Sbjct: 2934 RALKPLMSETTVIVNIVDS-NDNPPEFNSPSYFTPVTKSVKVGT 2976



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 20/176 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG 64
            K  LDR+  +  ++   V A+++     S  V++TV L+D+NDN P       +   +  
Sbjct: 1031 KAELDREIQD--RYNLVVTAKDRAVEPLSATVNVTVILDDVNDNRPLFNSTNYVFHFEEE 1088

Query: 65   EARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
            + R  +V ++ A D D G N+E+ Y+      T    F ++  +G + +T +L       
Sbjct: 1089 QKRGSLVGQVFAEDKDFGPNSEVRYTF----ETPQPNFELNAITGELTSTLQLDRESLMR 1144

Query: 118  --AGEQYSITVQATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                  +S  V ++D G       Q  V+V  +   N   P F ++ +  ++SE A
Sbjct: 1145 QRGAAVFSFVVVSSDQGLPKPLRDQAKVQV-YIQDINDNPPKFTKDIFQASISESA 1199



 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
            ++ A+D D G +  + Y I+  S      F I+ R+G I  TG L     E+ S+ V A 
Sbjct: 3295 EVFASDRDQGEDGVVYYLIFGRSRK--KGFGINKRTGQIYVTGTLDREKEEKVSLKVLAK 3352

Query: 130  DTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGAS 169
            + G      I EV V   +   N   PVF    YDV VSEG S
Sbjct: 3353 NAGSIRGADIDEVFVNITILDAND-PPVFTNELYDVQVSEGLS 3394


>gi|440911891|gb|ELR61516.1| Cadherin-23, partial [Bos grunniens mutus]
          Length = 3319

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDNAP  P     P  +  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1693 TVLVNVNDINDNAPTFPRDYEGPFDVTEGQPGPRVWTFLAHDQDSGPNGQVEYSI--VDG 1750

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1751 DPLGEFLISPVEGVLRVRKDVELDREAIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1809

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + I+S VA I  S   SGC
Sbjct: 1810 DNDPVLLNLPMNVTISENSPISSFVARILASDADSGC 1846



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 15/189 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+     +++ +V+A +      S   +LT+ + D+ND  P   P +  + 
Sbjct: 901  VVVTTAELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVS 958

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TD+D+G+NAE++Y I   +  G  KF +  R   + T   L   
Sbjct: 959  VSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDG--KFSVGYRDATVRTVVNLDRE 1016

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVS----EGASI 170
                Y++ ++A D G  GK       V V V   N   P+F Q++Y+ +VS    EG SI
Sbjct: 1017 TTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSEDIPEGHSI 1076

Query: 171  NSTVATITV 179
               V T  +
Sbjct: 1077 VQAVTTCLI 1085



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 23/174 (13%)

Query: 9   LDRDPPNPGK---FRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           LDR+ P+P +    R  +++    GT    A+   ++ VNL D+NDN P    +P +   
Sbjct: 795 LDRENPDPHEAELMRKIIVSVTDCGTPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEV 854

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
           ++   A   + ++ A D D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 855 LEGTPAGVSVYQVVAIDLDEGLNGLVSYRM----QVGMPRMDFVINSSSGVVVTTAELDR 910

Query: 117 --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             IA  +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 911 ERIA--EYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPAVYNVSVSE 961



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 18/158 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLPMIP-PIQIQ 62
            +LDR+  +   +    +A++  G  AS      V + + + DIND  P+   +     + 
Sbjct: 2427 SLDREKKD--HYILTALAKDNPGDVASNRRENSVQVVIQVLDINDCRPQFSKLQFSTSVY 2484

Query: 63   AGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
              E A   ++ + ATD D G NAE+ YS+      G+  F +D  SG++ T   L + E+
Sbjct: 2485 ENEPAGTSVITMMATDQDEGSNAELAYSL---EGPGMEAFHVDIDSGLVTTKRPLQSYER 2541

Query: 122  YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            +S+TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2542 FSLTVVATDGGQPPLWGTTMLLVEVIDV---NDNRPVF 2576



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + DINDN P +       +   E       +V++ ATD D+G+N+ ++Y  Y    
Sbjct: 1477 LQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLSY--YITGG 1534

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
                 FR+D  SG I T       E+ S     +TV+   T   S+ T V V++V   N 
Sbjct: 1535 NEDMTFRMDRVSGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1593

Query: 151  RSPVFQQNTYDVNVSEGA-SINSTVATITVSRLASG 185
             +PVFQQ  Y++ + EG  +IN+++ TI    L  G
Sbjct: 1594 NAPVFQQPHYEILLDEGPDTINTSLITIRALDLDEG 1629



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAG-EARRQIVKI 73
            +F   V+A +           L V + D+NDN P   R P    + I+     R  + ++
Sbjct: 2541 RFSLTVVATDGGQPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTVLHIREEIPLRSNVYEV 2600

Query: 74   EATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             ATD D G+N  + YS    + N     F IDP SG+I+T  +L   +Q  YS+ + A+D
Sbjct: 2601 YATDKDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASD 2660

Query: 131  TG 132
             G
Sbjct: 2661 LG 2662



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   VIAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 483 RFTLTVIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYVGALRENEPSVTQLV 536

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITV 126
           ++ ATD D   N +ITYSI + S  G +    +    GVI  +  L    I      +TV
Sbjct: 537 RLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYEQIPNGLIYLTV 596

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 597 MAKDAGNPPLNSTVSVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDL 653



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L V + D NDN P   P    + + + 
Sbjct: 1991 IDREAFSPPVLELLLLAEDIGLLNGTA-----DLLVTILDDNDNWPTFSPAAVTVHLLEN 2045

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  +++I ATD D G+N E+   IY +      +F I P SG++      I  E+  
Sbjct: 2046 CPPGFSVLQITATDEDSGLNGEL---IYRIEAGAQDRFLIHPVSGIVRVGNATIDREEQE 2102

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T +   ++   N   P F      V+V E A   + +A +T
Sbjct: 2103 SYRLTVVATDRGAVPLSGTAIITVLIDDINDSRPEFLNPIQTVSVLESAEPGTVIANVT 2161



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 31/174 (17%)

Query: 32   AASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGV 82
            + SVP   LTVN+ D+NDN P+     P  I     R          ++ + A D D G+
Sbjct: 2235 SVSVPNAKLTVNILDVNDNTPQFK---PFGITYYTERILEGATPGTTLIAVAAVDPDKGL 2291

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSG-VIETTGKLIAG--------EQYSITVQATDTGG 133
            N  ITYS        L + R     G  +   GK+IA            + TV+A+D G 
Sbjct: 2292 NGLITYS-------ELPRVRGGQDGGESLCVLGKVIANRTVDYEEVHWLNFTVRASDNGS 2344

Query: 134  --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              ++++  V + +V   N  +P+F Q +Y   V E   + + + T+T +   SG
Sbjct: 2345 PPRAAEIPVYLEIV-DINDNNPIFDQLSYQEAVFEDVPVGTVILTVTATDADSG 2397



 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND+G   E+ Y      +    +F +D  +G+I    +L     +++++TV 
Sbjct: 434 VLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLIVLIARLDYELIQRFTLTVI 489

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 490 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 521



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 20/188 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
           +V  ++ LDR+  +     F V   + QG    +   + + + D+NDNAP     P  ++
Sbjct: 38  VVWLRQPLDRETKSEFTVEFSV--SDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVR 92

Query: 61  IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           I   E R        I  + ATD DLG    + YS    S      F +D   G++    
Sbjct: 93  IPEVEQRGNTPVGTPIFIVNATDPDLGAGGSVLYSFQPPS----QFFAVDSARGIVTVIR 148

Query: 115 KLI--AGEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASI 170
           +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +  
Sbjct: 149 ELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPP 208

Query: 171 NSTVATIT 178
            +TV  IT
Sbjct: 209 GTTVRIIT 216



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +IV+++A   D  +N +ITY    + S      F+ID  +GVI   G L    G+ Y++T
Sbjct: 1296 EIVRVQAYSID-NLN-QITYRFDAYTSAQAKALFKIDAITGVITVKGLLDREKGDFYTLT 1353

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD-VNVSEGASINSTVATI 177
            V A D G K   T+V ++V+   N  SP F   +   ++V E  ++   VAT+
Sbjct: 1354 VVADDGGPKVDSTVVYITVL-DENDNSPRFDFTSDSAISVPEDCTVGQHVATV 1405



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 12/172 (6%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
           PN G     V+A++      +  VS+T+ + D NDN P     P   +   E   A   +
Sbjct: 588 PN-GLIYLTVMAKDAGNPPLNSTVSVTIEVFDENDNPPTFSK-PAYFVSVVENIMAGATV 645

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
           + + ATD D          IY +   G  +FRI+ RSG I TT  L      +Y + V+A
Sbjct: 646 LFLNATDLDRSREYGQESIIYSLE--GSSQFRINARSGEITTTSLLDRETKSEYILIVRA 703

Query: 129 TDTG-GKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G G + +T I  V++ +   N   P ++   Y +N+ E    +S V T+
Sbjct: 704 MDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTV 755


>gi|395817395|ref|XP_003782157.1| PREDICTED: protocadherin beta-18-like [Otolemur garnettii]
          Length = 788

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           DINDNAP+   ++  +QI +       ++K+ ATD D G+N E+TYS  HVS      F 
Sbjct: 234 DINDNAPKFEKLVYEVQIPENSPVDSLVIKVSATDLDAGINGELTYSFSHVSRDIRKTFE 293

Query: 103 IDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           I P SG +     L+  E    Y+I +QA D G  S ++ + V VV   N   P     +
Sbjct: 294 IHPTSGEVHLKA-LLDFELIPSYTINIQAIDGGSLSGKSTILVRVV-DVNDNPPEIAMTS 351

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
               + E +S    VA  +V    SG
Sbjct: 352 LTSPIPENSSPEVVVAVFSVRDQDSG 377


>gi|300794778|ref|NP_001178135.1| cadherin-23 precursor [Bos taurus]
          Length = 3354

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDNAP  P     P  +  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1729 TVLVNVNDINDNAPTFPRDYEGPFDVTEGQPGPRVWTFLAHDQDSGPNGQVEYSI--VDG 1786

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1787 DPLGEFLISPVEGVLRVRKDVELDREAIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1845

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + I+S VA I  S   SGC
Sbjct: 1846 DNDPVLLNLPMNVTISENSPISSFVARILASDADSGC 1882



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+     +++ +V+A +      S   +LT+ + D+ND  P   P +  + 
Sbjct: 946  VVVTTAELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVS 1003

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TD+D+G+NAE++Y I   +  G  KF +  R   + T   L   
Sbjct: 1004 VSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDG--KFSVGYRDATVRTVVNLDRE 1061

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                Y++ ++A D G  GK       V V V   N   P+F Q++Y+ +VSE
Sbjct: 1062 TTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSE 1113



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 23/174 (13%)

Query: 9    LDRDPPNPGK---FRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
            LDR+ P+P +    R  +++    GT    A+   ++ VNL D+NDN P    +P +   
Sbjct: 840  LDRENPDPHEAELMRKIIVSVTDCGTPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEV 899

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
            ++   A   + ++ A D D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 900  LEGTPAGVSVYQVVAIDLDEGLNGLVSYRM----QVGMPRMDFVINSSSGVVVTTAELDR 955

Query: 117  --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              IA  +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 956  ERIA--EYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPAVYNVSVSE 1006



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + DINDN P +       +   E       +V++ ATD D+G+N+ ++Y  Y    
Sbjct: 1513 LQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLSY--YITGG 1570

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
                 FR+D  SG I T       E+ S     +TV+   T   S+ T V V++V   N 
Sbjct: 1571 NEDMTFRMDRVSGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1629

Query: 151  RSPVFQQNTYDVNVSEGA-SINSTVATITVSRLASG 185
             +PVFQQ  Y++ + EG  +IN+++ TI    L  G
Sbjct: 1630 NAPVFQQPHYEILLDEGPDTINTSLITIRALDLDEG 1665



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLPMIP-PIQIQ 62
            +LDR+  +   +    +A++  G  AS      V + + + D+ND  P+   +     + 
Sbjct: 2462 SLDREKKD--HYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSVY 2519

Query: 63   AGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
              E A   ++ + ATD D G NAE+ YS+      G+  F +D  SG++ T   L + E+
Sbjct: 2520 ENEPAGTSVITMMATDQDEGSNAELAYSL---EGPGVEAFHVDMDSGLVTTKRPLQSYER 2576

Query: 122  YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            +S+TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2577 FSLTVVATDGGQPPLWGTTMLLVEVIDV---NDNRPVF 2611



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 30/173 (17%)

Query: 32   AASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGV 82
            + SVP   LTVN+ D+NDN P+     P  I     R          ++ + A D D G+
Sbjct: 2271 SVSVPNAKLTVNILDVNDNTPQFK---PFGITYYTERILEGATPGTTLIAVAAVDPDKGL 2327

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
            N  ITYS+ ++   G  +           + GK+IA            + TV+A+D G  
Sbjct: 2328 NGLITYSLLNLMPPGYVQLED-------SSAGKVIANRTVDYEEVHWLNFTVRASDNGSP 2380

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++++  V + +V   N  +P+F Q +Y   V E   + + + T+T +   SG
Sbjct: 2381 PRAAEIPVYLEIV-DINDNNPIFDQLSYQEAVFEDVPVGTVILTVTATDADSG 2432



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAG-EARRQIVKI 73
            +F   V+A +           L V + D+NDN P   R P    + I+     R  + ++
Sbjct: 2576 RFSLTVVATDGGQPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTVLHIREEIPLRSNVYEV 2635

Query: 74   EATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             ATD D G+N  + YS    + N     F IDP SG+I+T  +L   +Q  YS+ + A+D
Sbjct: 2636 YATDKDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASD 2695

Query: 131  TG 132
             G
Sbjct: 2696 LG 2697



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   VIAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 528 RFTLTVIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYVGALRENEPSVTQLV 581

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITV 126
           ++ ATD D   N +ITYSI + S  G +    +    GVI  +  L    I      +TV
Sbjct: 582 RLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYEQIPNGLIYLTV 641

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 642 MAKDAGNPPLNSTVSVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDL 698



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L V + D NDN P   P    + + + 
Sbjct: 2027 IDREAFSPPVLELLLLAEDIGLLNGTA-----DLLVTILDDNDNWPTFSPAAVTVHLLEN 2081

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  +++I ATD D G+N E+   IY +      +F I P SG++      I  E+  
Sbjct: 2082 CPPGFSVLQITATDEDSGLNGEL---IYRIEAGAQDRFLIHPVSGIVRVGNATIDREEQE 2138

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T +   ++   N   P F      V+V E A   + +A +T
Sbjct: 2139 SYRLTVVATDRGAVPLSGTAIITVLIDDINDSRPEFLNPIQTVSVLESAEPGTVIANVT 2197



 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND+G   E+ Y      +    +F +D  +G+I    +L     +++++TV 
Sbjct: 479 VLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLIVLIARLDYELIQRFTLTVI 534

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 535 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 566



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 12/172 (6%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
           PN G     V+A++      +  VS+T+ + D NDN P     P   +   E   A   +
Sbjct: 633 PN-GLIYLTVMAKDAGNPPLNSTVSVTIEVFDENDNPPTFSK-PAYFVSVVENIMAGATV 690

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
           + + ATD D          IY +   G  +FRI+ RSG I TT  L      +Y + V+A
Sbjct: 691 LFLNATDLDRSREYGQESIIYSLE--GSSQFRINARSGEITTTSLLDRETKSEYILIVRA 748

Query: 129 TDTG-GKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G G + +T I  V++ +   N   P ++   Y +N+ E    +S V T+
Sbjct: 749 VDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTV 800



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 29/190 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           +V  ++ LDR+  +     F V   + QG    +   + + + D+NDNAP         R
Sbjct: 86  VVWLRQPLDRETKSEFTVEFSV--SDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVR 140

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           +P   P+          I  + ATD DLG    + YS    S      F +D   G++  
Sbjct: 141 IPENTPVGTP-------IFIVNATDPDLGAGGSVLYSFQPPS----QFFAVDSARGIVTV 189

Query: 113 TGKLI--AGEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
             +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +
Sbjct: 190 IRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHS 249

Query: 169 SINSTVATIT 178
              +TV  IT
Sbjct: 250 PPGTTVRIIT 259



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 20/160 (12%)

Query: 33  ASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           A+V  +  + + DINDNAP        +      Q G A    +++   D +LG+N+   
Sbjct: 328 ATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNS--M 385

Query: 88  YSIYHVSNTGLHKFRIDPRS--GVIETTGKLIAGEQYSITVQATDTGGKSSQTI------ 139
           + +Y V N   H F I P S  G  +   ++     Y  TV   D    +++++      
Sbjct: 386 FEVYLVGNNS-HHFIISPTSVQGKADIRIRVAIPLDYE-TVDRYDFDLFANESVPDHVGY 443

Query: 140 --VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V+++++   N   P+F Q  Y+V++ E  ++ ++V T+
Sbjct: 444 AKVKITLI-NENDNRPIFSQPLYNVSLYENVTVGTSVLTV 482


>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
          Length = 4982

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++ + LDR+     + ++ ++ R   G  +S  V + + ++D+ND+ P+         I
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DVRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVL 1904

Query: 117  -IAGEQYSI-TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                +QY I TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DFEAQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+   I    P+   ++ G    +
Sbjct: 2947 NINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLTIKYFTPVTKNVKVG---TK 3003

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 3004 LIKVTAVDDKDFGLNSEVEYFISNENHLG--KFKLDNDTGWISVASSLISDLNQNFLITV 3061

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V+++V    N  +P F Q+     + E  SI + V T++
Sbjct: 3062 TAKDKGNPPLSSQATVQITVTE-ENYHTPEFSQSHMSATIPESHSIGAIVRTVS 3114



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAPR  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPRF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL       YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFSIDSSSGQVALIGKLDYETTPAYSLIIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S  V + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGPNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYQVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            K    + A +    A +   S+TVN+ D+NDN+P        P  ++   +   ++ + A
Sbjct: 3161 KHEMMISAVDGGWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTVLENAPSGTTVIHLNA 3220

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A +   
Sbjct: 3221 TDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPD 3277

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   +   V++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3278 EERCSFTTVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3325



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  +V   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDTV---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 976  LSSSLILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V L D+ND  P         +   E      +++ + ATD DLG N  + +S+   + 
Sbjct: 568 LVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLILRATDRDLGDNGTVGFSLQE-AE 626

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           T    FR+DP SG + T   L   EQ  YS+ V ATD G     ++V ++V +   N  S
Sbjct: 627 TDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNS 686

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PVF    Y  ++ E     S + T++ +
Sbjct: 687 PVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDVRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VGGNANQEFRIDSVTGAI-TVAKPLDREKTPTYL 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPE 2270



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2453 SVFVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGANSELQYSL-- 2507

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   ++  T V V  V   + 
Sbjct: 2508 -SGRNSEKFHIDPLRGAIMAAGPLTGASEVTFSVHVKDGGSFPRTDSTTVTVRFVNKADF 2566

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   + S V TIT S L
Sbjct: 2567 PKVRAKEQTF--MFPENQPVGSLVTTITGSSL 2596



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN P     P + +I    + R+I+ + A 
Sbjct: 2636 KYVLWIEARDGGFPPFSSYEKLDITVLDVNDNVPIFKEDPFVSEILENLSPRKILTVSAM 2695

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V     + F I+  +G I +   L   +  QY +TV+++D G  
Sbjct: 2696 DKDSGPNGQLDYEI--VKGNEENSFSINHATGEIRSIRPLDREKVSQYMLTVKSSDKGSP 2753

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T ++V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2754 SQSTSIKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2799



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+T+QA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTLQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 10/145 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYS 89
           A S   SL + +NDIND+ P     +  + + +       +  + ATD D G+NA + YS
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVCGVSATDGDSGLNANLRYS 513

Query: 90  IYHVSNTGLHKFRIDPRSGVIET--TGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV- 144
           I  VS  GL  F I   SG++ T  TG L      Q  + + A D G     +  ++ V 
Sbjct: 514 I--VSGNGLGWFHISEHSGLVTTGATGGLNRELASQIVLNISARDQGVHPKFSYAQLVVT 571

Query: 145 VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +   N   PVF Q   YDV+V E A
Sbjct: 572 LLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   V + +K   + S  + + +N+ D NDNAPR   I    + +     
Sbjct: 2733 LDRE--KVSQYMLTVKSSDKGSPSQSTSIKVIINILDENDNAPRFSQIFSAHVPENSPLG 2790

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     +++ I 
Sbjct: 2791 YTVTRVTTSDEDIGMNAISKYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRFRIR 2846

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2847 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSRVTQVSAT 2899



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG++ E+ Y I+   N
Sbjct: 3285 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGIDGEVHYLIF--GN 3342

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3343 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3402

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P+F  N Y V +SEG  + + V  ++
Sbjct: 3403 -PPIFSLNIYSVQISEGVPVGTHVTFVS 3429



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D GVN E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGVNGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  + LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSLILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVAFDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQKAGSFVGKVS 1123



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QA 63
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P            + 
Sbjct: 1055 KSELDRELQD--RYVLLVVAFDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 64   GEARRQIVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             +A   + K+ A D D G N E+ Y+         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QKAGSFVGKVSAVDKDFGPNGEVRYAFEMVQPDFELHAISGEITNTHQFD---RESLMRQ 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPRFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 9/165 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
            +   V A ++  T  +   ++++ L DIND  P   + P     P  ++     R I+++
Sbjct: 2225 YLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPENLET--LPRTILQV 2282

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
             A D+D G N++I+Y ++  +              VI++  +  + EQ+ +TV ATD+G 
Sbjct: 2283 VARDDDQGSNSKISYVLFGGNEDNAFTLSASGELRVIQSLDRE-SKEQFVLTVTATDSGS 2341

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +      + V V   N   P F    Y   + E A   + V  +
Sbjct: 2342 PALTGTGTIHVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLV 2386



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDEIKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
          Length = 4981

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++ + LDR+     + ++ ++ R   G  +S  V + + ++D+ND+ P+         I
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DVRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVL 1904

Query: 117  -IAGEQYSI-TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                +QY I TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DFEAQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+   I    P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLTIKYFTPVTKNVKVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 3002 LIKVTAVDDKDFGLNSEVEYFISNENHLG--KFKLDNDTGWISVASSLISDLNQNFLITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V+++V    N  +P F Q+     + E  SI + V T++
Sbjct: 3060 TAKDKGNPPLSSQATVQITVTE-ENYHTPEFSQSHMSATIPESHSIGAIVRTVS 3112



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAPR  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPRF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL       YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFSIDSSSGQVALIGKLDYETTPAYSLIIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S  V + V+L DINDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGPNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYQVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            K    + A +    A +   S+TVN+ D+NDN+P        P  ++   +   ++ + A
Sbjct: 3159 KHEMMISAVDGGWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTVLENAPSGTTVIHLNA 3218

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A +   
Sbjct: 3219 TDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPD 3275

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   +   V++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3276 EERCSFTTVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  +V   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDTV---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 976  LSSSLILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V L D+ND  P         +   E      +++ + ATD DLG N  + +S+   + 
Sbjct: 568 LVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLILRATDRDLGDNGTVGFSLQE-AE 626

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           T    FR+DP SG + T   L   EQ  YS+ V ATD G     ++V ++V +   N  S
Sbjct: 627 TDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNS 686

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PVF    Y  ++ E     S + T++ +
Sbjct: 687 PVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDVRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VGGNANQEFRIDSVTGAI-TVAKPLDREKTPTYL 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPE 2270



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVFVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGANSELQYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   ++  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLTGASEVTFSVHVKDGGSFPRTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   + S V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVGSLVTTITGSSL 2594



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN P     P + +I    + R+I+ + A 
Sbjct: 2634 KYVLWIEARDGGFPPFSSYEKLDITVLDVNDNVPIFKEDPFVSEILENLSPRKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V     + F I+  +G I +   L   +  QY +TV+++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VKGNEENSFSINHATGEIRSIRPLDREKVSQYMLTVKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T ++V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSIKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+T+QA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTLQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 10/145 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYS 89
           A S   SL + +NDIND+ P     +  + + +       +  + ATD D G+NA + YS
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVCGVSATDGDSGLNANLRYS 513

Query: 90  IYHVSNTGLHKFRIDPRSGVIET--TGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV- 144
           I  VS  GL  F I   SG++ T  TG L      Q  + + A D G     +  ++ V 
Sbjct: 514 I--VSGNGLGWFHISEHSGLVTTGATGGLNRELASQIVLNISARDQGVHPKFSYAQLVVT 571

Query: 145 VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +   N   PVF Q   YDV+V E A
Sbjct: 572 LLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   V + +K   + S  + + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSQYMLTVKSSDKGSPSQSTSIKVIINILDENDNAPRFSQIFSAHVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     +++ I 
Sbjct: 2789 YTVTRVTTSDEDIGMNAISKYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRFRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSRVTQVSAT 2897



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG++ E+ Y I+   N
Sbjct: 3283 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGIDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P+F  N Y V +SEG  + + V  ++
Sbjct: 3401 -PPIFSLNIYSVQISEGVPVGTHVTFVS 3427



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D GVN E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGVNGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  + LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSLILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVAFDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQKAGSFVGKVS 1123



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QA 63
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P            + 
Sbjct: 1055 KSELDRELQD--RYVLLVVAFDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 64   GEARRQIVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             +A   + K+ A D D G N E+ Y+         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QKAGSFVGKVSAVDKDFGPNGEVRYAFEMVQPDFELHAISGEITNTHQFD---RESLMRQ 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPRFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 9/165 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
            +   V A ++  T  +   ++++ L DIND  P   + P     P  ++     R I+++
Sbjct: 2225 YLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPENLET--LPRTILQV 2282

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG 133
             A D+D G N++I+Y ++  +              VI++  +  + EQ+ +TV ATD+G 
Sbjct: 2283 VARDDDQGSNSKISYVLFGGNEDNAFTLSASGELRVIQSLDRE-SKEQFVLTVTATDSGS 2341

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +      + V V   N   P F    Y   + E A   + V  +
Sbjct: 2342 PALTGTGTIHVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLV 2386



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDEIKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|296472179|tpg|DAA14294.1| TPA: cadherin-23-like [Bos taurus]
          Length = 3354

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDNAP  P     P  +  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1729 TVLVNVNDINDNAPTFPRDYEGPFDVTEGQPGPRVWTFLAHDQDSGPNGQVEYSI--VDG 1786

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1787 DPLGEFLISPVEGVLRVRKDVELDREAIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1845

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + I+S VA I  S   SGC
Sbjct: 1846 DNDPVLLNLPMNVTISENSPISSFVARILASDADSGC 1882



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+     +++ +V+A +      S   +LT+ + D+ND  P   P +  + 
Sbjct: 946  VVVTTAELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVS 1003

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TD+D+G+NAE++Y I   +  G  KF +  R   + T   L   
Sbjct: 1004 VSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDG--KFSVGYRDATVRTVVNLDRE 1061

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                Y++ ++A D G  GK       V V V   N   P+F Q++Y+ +VSE
Sbjct: 1062 TTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSE 1113



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 23/174 (13%)

Query: 9    LDRDPPNPGK---FRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
            LDR+ P+P +    R  +++    GT    A+   ++ VNL D+NDN P    +P +   
Sbjct: 840  LDRENPDPHEAELMRKIIVSVTDCGTPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEV 899

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
            ++   A   + ++ A D D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 900  LEGTPAGVSVYQVVAIDLDEGLNGLVSYRM----QVGMPRMDFVINSSSGVVVTTAELDR 955

Query: 117  --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              IA  +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 956  ERIA--EYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPAVYNVSVSE 1006



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + DINDN P +       +   E       +V++ ATD+D+G+N+ ++Y  Y    
Sbjct: 1513 LQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDHDIGINSVLSY--YITGG 1570

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
                 FR+D  SG I T       E+ S     +TV+   T   S+ T V V++V   N 
Sbjct: 1571 NEDMTFRMDRVSGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1629

Query: 151  RSPVFQQNTYDVNVSEGA-SINSTVATITVSRLASG 185
             +PVFQQ  Y++ + EG  +IN+++ TI    L  G
Sbjct: 1630 NAPVFQQPHYEILLDEGPDTINTSLITIRALDLDEG 1665



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLPMIP-PIQIQ 62
            +LDR+  +   +    +A++  G  AS      V + + + D+ND  P+   +     + 
Sbjct: 2462 SLDREKKD--HYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSVY 2519

Query: 63   AGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
              E A   ++ + ATD D G NAE+ YS+      G+  F +D  SG++ T   L + E+
Sbjct: 2520 ENEPAGTSVITMMATDQDEGSNAELAYSL---EGPGVEAFHVDMDSGLVTTKRPLQSYER 2576

Query: 122  YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            +S+TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2577 FSLTVVATDGGQPPLWGTTMLLVEVIDV---NDNRPVF 2611



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 30/173 (17%)

Query: 32   AASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGV 82
            + SVP   LTVN+ D+NDN P+     P  I     R          ++ + A D D G+
Sbjct: 2271 SVSVPNAKLTVNILDVNDNTPQFK---PFGITYYTERILEGATPGTTLIAVAAVDPDKGL 2327

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
            N  ITYS+ ++   G  +           + GK+IA            + TV+A+D G  
Sbjct: 2328 NGLITYSLLNLMPPGYVQLED-------SSAGKVIANRTVDYEEVHWLNFTVRASDNGSP 2380

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++++  V + +V   N  +P+F Q +Y   V E   + + + T+T +   SG
Sbjct: 2381 PRAAEIPVYLEIV-DINDNNPIFDQLSYQEAVFEDVPVGTVILTVTATDADSG 2432



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAG-EARRQIVKI 73
            +F   V+A +           L V + D+NDN P   R P    + I+     R  + ++
Sbjct: 2576 RFSLTVVATDGGQPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTVLHIREEIPLRSNVYEV 2635

Query: 74   EATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
             ATD D G+N  + YS    + N     F IDP SG+I+T  +L   +Q  YS+ + A+D
Sbjct: 2636 YATDKDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASD 2695

Query: 131  TG 132
             G
Sbjct: 2696 LG 2697



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   VIAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 528 RFTLTVIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYVGALRENEPSVTQLV 581

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITV 126
           ++ ATD D   N +ITYSI + S  G +    +    GVI  +  L    I      +TV
Sbjct: 582 RLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYEQIPNGLIYLTV 641

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 642 MAKDAGNPPLNSTVSVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDL 698



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L V + D NDN P   P    + + + 
Sbjct: 2027 IDREAFSPPVLELLLLAEDIGLLNGTA-----DLLVTILDDNDNWPTFSPAAVTVHLLEN 2081

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  +++I ATD D G+N E+   IY +      +F I P SG++      I  E+  
Sbjct: 2082 CPPGFSVLQITATDEDSGLNGEL---IYRIEAGAQDRFLIHPVSGIVRVGNATIDREEQE 2138

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T +   ++   N   P F      V+V E A   + +A +T
Sbjct: 2139 SYRLTVVATDRGAVPLSGTAIITVLIDDINDSRPEFLNPIQTVSVLESAEPGTVIANVT 2197



 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND+G   E+ Y      +    +F +D  +G+I    +L     +++++TV 
Sbjct: 479 VLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLIVLIARLDYELIQRFTLTVI 534

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 535 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 566



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 12/172 (6%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
           PN G     V+A++      +  VS+T+ + D NDN P     P   +   E   A   +
Sbjct: 633 PN-GLIYLTVMAKDAGNPPLNSTVSVTIEVFDENDNPPTFSK-PAYFVSVVENIMAGATV 690

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
           + + ATD D          IY +   G  +FRI+ RSG I TT  L      +Y + V+A
Sbjct: 691 LFLNATDLDRSREYGQESIIYSLE--GSSQFRINARSGEITTTSLLDRETKSEYILIVRA 748

Query: 129 TDTG-GKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G G + +T I  V++ +   N   P ++   Y +N+ E    +S V T+
Sbjct: 749 VDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTV 800



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 29/190 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           +V  ++ LDR+  +     F V   + QG    +   + + + D+NDNAP         R
Sbjct: 86  VVWLRQPLDRETKSEFTVEFSV--SDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVR 140

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           +P   P+          I  + ATD DLG    + YS    S      F +D   G++  
Sbjct: 141 IPENTPVGTP-------IFIVNATDPDLGAGGSVLYSFQPPS----QFFAVDSARGIVTV 189

Query: 113 TGKLI--AGEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
             +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +
Sbjct: 190 IRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHS 249

Query: 169 SINSTVATIT 178
              +TV  IT
Sbjct: 250 PPGTTVRIIT 259



 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 20/160 (12%)

Query: 33  ASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           A+V  +  + + DINDNAP        +      Q G A    +++   D +LG+N+   
Sbjct: 328 ATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNS--M 385

Query: 88  YSIYHVSNTGLHKFRIDPRS--GVIETTGKLIAGEQYSITVQATDTGGKSSQTI------ 139
           + +Y V N   H F I P S  G  +   ++     Y  TV   D    +++++      
Sbjct: 386 FEVYLVGNNS-HHFIISPTSVQGKADIRIRVAIPLDYE-TVDRYDFDLFANESVPDHVGY 443

Query: 140 --VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             V+++++   N   P+F Q  Y+V++ E  ++ ++V T+
Sbjct: 444 AKVKITLI-NENDNRPIFSQPLYNVSLYENVTVGTSVLTV 482


>gi|291387496|ref|XP_002710176.1| PREDICTED: Protocadherin beta-17-like [Oryctolagus cuniculus]
          Length = 812

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDNAP     P  ++Q  E       I+K+ A+D D G+N E++YS  HVS      F
Sbjct: 234 DINDNAPEFEK-PVYEVQVPENSPVDSLIIKVSASDLDAGINGELSYSFSHVSRDARKTF 292

Query: 102 RIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            I P SG +     L     + Y+I +QA D G  S +  + V VV   N   P     +
Sbjct: 293 EIHPISGEVHLKALLDFETIQSYTINIQAIDGGSLSGKATILVRVV-DVNDNPPEIAMTS 351

Query: 160 YDVNVSEGASINSTVATITVSRLASG------CAIMN 190
               + E +S    VA  +V    SG      C+I N
Sbjct: 352 LISPIPENSSPEMVVAVFSVRDPDSGDNGRMVCSIQN 388



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP---------IQIQAGEARRQ 69
           F F V A ++   A S    + V L D ND+AP + + PP         +  +A +A   
Sbjct: 527 FEFGVRAADRGSPALSSEARVRVQLLDANDHAPAV-LYPPANGSAACPELVPRAADAGYL 585

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + K+ A D D G NA +++ +   +  GL  F +   SG + T   L
Sbjct: 586 VTKVVAVDGDAGQNAWLSFELLKATEPGL--FGVWAHSGEVRTARPL 630


>gi|260783947|ref|XP_002587032.1| hypothetical protein BRAFLDRAFT_183786 [Branchiostoma floridae]
 gi|229272166|gb|EEN43043.1| hypothetical protein BRAFLDRAFT_183786 [Branchiostoma floridae]
          Length = 581

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 10/169 (5%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEA-RRQIVKIEATDNDL 80
           V  +   G  AS  + + ++L D+NDNAP+ L  +    I+   A   ++  + ATD D 
Sbjct: 418 VTVQASDGQQAST-IDVNISLTDVNDNAPQFLRSVYSFDIREDAAVNSEVNFVSATDTDE 476

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT 138
           G NA+ITYSI    N G+  F I P++GVI     L     + Y +TVQA D GG++S  
Sbjct: 477 GSNADITYSITD-ENQGM--FDITPKTGVIILRRPLDYEQTQHYVLTVQARDGGGRASSV 533

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDV-NVSEGASINSTVATITVSRLASGC 186
            V V+ V   N   PVF  + Y   ++SE     +++ T++ +    G 
Sbjct: 534 TVYVN-VKDLNDNPPVFDPDRYSADDISEDVPAGTSILTVSATDRDEGM 581



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 14/183 (7%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQ 62
           + +NLDR+     +  +Q+    + G +      L VN++  D NDN P       I + 
Sbjct: 85  TNQNLDREI----RSSYQLNISAQDGGSPPRYGYLLVNISVRDSNDNPPIFDQSEYI-VS 139

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E+      ++ + ATD D G NAEITY +   S     KF+IDPR+GV+     L   
Sbjct: 140 LNESAPIGTSVLTVRATDIDEGTNAEITYLL--DSGEPATKFQIDPRTGVVTLAQNLSPS 197

Query: 120 EQ-YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +  Y++ V ATD G G+ S T      +  PN   P F +++Y   V E   + ++V ++
Sbjct: 198 QTFYTLVVSATDQGPGRRSSTSEITFFITSPNNNGPAFSRSSYSGIVRENQPVGTSVTSV 257

Query: 178 TVS 180
             S
Sbjct: 258 RAS 260



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 15/155 (9%)

Query: 39  LTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           +T+ L D NDNAP        +  P  + +G     +  + A D D+G NA + YSI   
Sbjct: 332 VTITLEDENDNAPMFNTDYRDISVPEDLASGGL---VTTVVANDADVGSNAIVLYSIIAG 388

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            +    +FR+D  +G I TTG L   +   +S+TVQA+D G ++S   V +S+    N  
Sbjct: 389 DD---GQFRVDSDTGEIRTTGPLNREQSPTHSVTVQASD-GQQASTIDVNISLT-DVNDN 443

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           +P F ++ Y  ++ E A++NS V  ++ +    G 
Sbjct: 444 APQFLRSVYSFDIREDAAVNSEVNFVSATDTDEGS 478



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 18/165 (10%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
           + + +++ DINDN+P  P  P I+I   E+ R   Q++   ATD D+G N++IT +   V
Sbjct: 1   IEVRIDILDINDNSPIFPD-PSIEISFSESARTGSQVILDTATDADIG-NSDITDNYRIV 58

Query: 94  SNTGLHKFRI----DPR---SGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTIVE 141
           S    + F +    +P    S +   T + +  E    Y + + A D G   +    +V 
Sbjct: 59  SGNANNTFELVVTTNPSGEASFLHLQTNQNLDREIRSSYQLNISAQDGGSPPRYGYLLVN 118

Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           +SV    N   P+F Q+ Y V+++E A I ++V T+  + +  G 
Sbjct: 119 ISVRDS-NDNPPIFDQSEYIVSLNESAPIGTSVLTVRATDIDEGT 162


>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
          Length = 3148

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAE 85
           T A     L+ N       A R P  P    Q        A   ++++ A D D G    
Sbjct: 291 TGAEAKRILSTNQARSRRAANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGR 350

Query: 86  ITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIV 140
           + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V A D G    S+ T+V
Sbjct: 351 LVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMV 410

Query: 141 EVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            V+V    N  +PVF+Q  Y      NV EG  I    AT
Sbjct: 411 AVTVA-DRNDHAPVFEQAQYRETLRENVEEGYPILQLRAT 449



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 705 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 761

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + G+   T  L      E+Y
Sbjct: 762 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGMGLVTLALPLDYKQERY 817

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 818 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874



 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N  SP+F    + V+V E A +  +V  I
Sbjct: 633 VDI------NDHSPIFVSTPFQVSVLENAPLGHSVIHI 664



 Score = 44.3 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176


>gi|449284111|gb|EMC90692.1| Neural-cadherin [Columba livia]
          Length = 2537

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 15/179 (8%)

Query: 13  PPNPG--KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           PPN    ++   + A +   +    P+S    + V +NDIN+N P               
Sbjct: 393 PPNLKGPQYTLNITAIDDNASGGPTPLSSFAEVIVGVNDINNNKPVFRECAYYSDSTWVL 452

Query: 67  RRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
             Q     ++++EA D DLGVN E+ Y + H     L  F IDP +GVI TT      +Q
Sbjct: 453 ENQPPGTYVLQVEAHDADLGVNGEVKYGLMHQDGASL-GFSIDPDTGVITTTQSFDREQQ 511

Query: 122 --YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             Y+++V ATD   +    + +V+V +   N   P F+ + Y   +SE   + ++   +
Sbjct: 512 REYTLSVTATDQAQEPLIGVCQVTVLIADVNDNDPKFENSRYQYFLSEDTPVGTSFLRV 570



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 16/190 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + + + LDR+  +   +RF V+A +++G   +    + + + D+NDNAP    +      
Sbjct: 1036 ISANKRLDREKRS--TWRFLVLATDERGEGLTGFADVIIEVRDVNDNAPLFLCVLDGCFM 1093

Query: 63   A-----GEARRQIVKIEATDND---LGVNAEITYSIYH-VSN-TGLHKFRIDPRSGVIET 112
                    A   ++++ A D D    G NA +TYSI   V N   L+ F ID  SG I T
Sbjct: 1094 GHIAEDSPADTSVIEMTAVDLDDPKAGTNAVLTYSIIQNVQNEINLNLFSIDSVSGTIYT 1153

Query: 113  TGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
                +  E+   Y + V+A D GG +      + +V   N  +PVF Q  Y   VSE AS
Sbjct: 1154 VLGSLDREKEDKYLVVVEARDGGGLTGTGTATI-LVTDVNDHAPVFLQRIYTAFVSENAS 1212

Query: 170  INSTVATITV 179
            IN+ VA ++V
Sbjct: 1213 INTEVAVVSV 1222



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVK 72
           F   V A+    T  +   ++ VN+ D+NDN P          +P    +  +    +V+
Sbjct: 726 FTLTVRAQNVAMTPLASFTTVCVNVTDVNDNVPFFVSSNYEVSVP----EGADVGTSVVQ 781

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
           + A D D G++ ++ Y I   ++     F I+P +GVI T       ++  Y I VQ+ D
Sbjct: 782 VLAMDLDSGLHGQVHYLILKDASGDYQFFTIEPETGVISTHASFDREKRASYLIEVQSQD 841

Query: 131 T---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           +         G  ++ T      V   N  +P F ++ Y+V++ E   + S V T T
Sbjct: 842 SSESARPGVHGHPNTDTAYVRIFVSDVNDNAPAFPRSVYEVSIDEDRDVGSPVVTAT 898



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV + D+NDN P+           +        +++ A D+D G NA ITYS+      
Sbjct: 534 VTVLIADVNDNDPKFENSRYQYFLSEDTPVGTSFLRVAAHDSDQGANAAITYSMLEHQ-- 591

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
            L  F+I+P +G +     L    + S  +  TD G +SS   VE++V V    ++ P +
Sbjct: 592 -LEYFQINPSTGWVYVNHPLSQTTRISRYIIVTDGGNRSSS--VELTVTVTNALSQPPQW 648

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +Q+ Y V + E    ++ + TI
Sbjct: 649 EQSRYWVTIPENTIRDTKIVTI 670



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           + ++D+NDNAP  P     ++   E R     +V   A D D G NA++ Y I   +  G
Sbjct: 863 IFVSDVNDNAPAFPR-SVYEVSIDEDRDVGSPVVTATAHDEDEGANAKLRYQITSGNLKG 921

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
           +  F ++P  G +  T  L   ++  Y + + A+D G   + T++ ++V+   N  +PVF
Sbjct: 922 V--FDVEPEVGTVFITQPLDYEQEQRYELRLVASD-GKWENHTLIIINVI-NKNDEAPVF 977

Query: 156 QQNTYDVNVSE 166
            QN Y  +V E
Sbjct: 978 LQNEYQGSVLE 988



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGGKS 135
           +N+   +A ITY++      G  +FR+D  +G+I TTG  L   ++Y +TV+A+D  G  
Sbjct: 56  NNNENTSAGITYTLI---AGGEERFRVDKDTGIIMTTGLPLTWNKEYVVTVEASDKYGNK 112

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           S     VS++ G  +R P F   +Y V+V E       VA +
Sbjct: 113 S-PYASVSILAG--SRPPQFTNMSYSVSVPENTPAGEKVAVV 151



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 21/169 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------PIQIQAGEARRQIVK 72
           +   + A E + T ++V   + V++ D ND +P            P  I  G +  Q++ 
Sbjct: 197 YHLLLRAMEAESTLSTV-TEVMVHITDENDCSPEFQHSIYSRDNIPETIPVGTSLLQVL- 254

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQAT 129
             ATD D G N+EI+Y I          F I  R GVI +  +L    A   Y   V A 
Sbjct: 255 --ATDCDSGSNSEISYFIQST------DFSI-TRHGVINSNQRLNFERANHMYEFVVIAV 305

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           D G         V + +   N  +PVF Q+ Y   +SE A  ++ VAT+
Sbjct: 306 DKGHPPRTGTASVRIRMANVNDEAPVFSQSVYRTFLSEDAGPSTLVATV 354


>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3 [Ovis aries]
          Length = 4184

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 905  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 964

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 965  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1023

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1024 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1068



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+  +  +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 362 LIRTEAALDRESMD--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 414

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 415 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAADAFEIDPRSGLIS 474

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 475 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 534

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 535 DVRPHTVVLRVTAT 548



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 692 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAT 748

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 749 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 804

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + STV  I+ S
Sbjct: 805 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTVVVISAS 861



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     +V I A+D+D+G NA ITY +       
Sbjct: 824 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLL----EDN 878

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 879 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 937

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 938 QFVASHYTGLVSEDAPPFTSVLQISAT 964



 Score = 46.2 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 54  PMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRS 107
           P  P    QA       A   ++++ A D D G    + YS+  + N+  L  F IDP+S
Sbjct: 301 PQFPQYNYQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLDLFSIDPQS 360

Query: 108 GVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY--- 160
           G+I T   L   + +++ + V A D G    S+ T+V V+V    N  +PVF+Q  Y   
Sbjct: 361 GLIRTEAALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQYRET 419

Query: 161 -DVNVSEGASINSTVAT 176
              NV EG  I    AT
Sbjct: 420 LRENVEEGYPILQLRAT 436



 Score = 44.7 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 504 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 561

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G        G +S  +
Sbjct: 562 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 619

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N  +P+F    + V+V E A +  +V  I
Sbjct: 620 VDI------NDHTPIFVSTPFQVSVLENAPLGHSVIHI 651



 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1028 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1084

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1085 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1142

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1143 NSPVLNNFQILFNNYVSNHSD 1163


>gi|224043469|ref|XP_002199274.1| PREDICTED: protocadherin-9 [Taeniopygia guttata]
          Length = 1203

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNEN 617



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKESQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRFFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   IN+ +A ITVS
Sbjct: 370 TVYLSEKDPINTKIALITVS 389


>gi|432879477|ref|XP_004073490.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
          Length = 786

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 94/203 (46%), Gaps = 20/203 (9%)

Query: 3   VVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V ++ LDR+  PN    R  + A +    A S  + + VN+ D+NDN P     P  ++
Sbjct: 179 LVLQKALDREKQPN---VRLILTAVDGGKPARSGNMQIIVNVVDVNDNTPLFSK-PLYKV 234

Query: 62  QAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLI 117
              E       I+K+ ATD D G NAEI YS+    N   H KF + P SG I    +L 
Sbjct: 235 SVRENESVGTTILKLNATDLDEGSNAEIKYSLMKRGNVDSHEKFYVVPESGEIVLKNRLD 294

Query: 118 AGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             E   Y + VQA+D GG  +S  + V + VV   N  +P     +    V E A I + 
Sbjct: 295 YEENNAYELRVQASDKGGSPRSGYSKVLIEVV-DMNDNAPEISITSVMSPVKEKAEIGTV 353

Query: 174 VATITVSRLASG------CAIMN 190
           VA +TV+    G      C I N
Sbjct: 354 VALVTVTDKDGGQNGITTCKIKN 376



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 18/140 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ----------AGEARR 68
           F+F+V A +      S  V++ V + D NDN+P +  + P              + EA  
Sbjct: 516 FQFKVQATDSGVPPLSSNVTVNVFVLDENDNSPSI--LAPYSEHGSVNSENIPYSAEAGY 573

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYS--IT 125
            + KI A D D G NA ++   YH+S   G + FRI   SG I T  ++   +  S  + 
Sbjct: 574 FVAKIRAVDPDSGYNALLS---YHLSEPKGNNLFRIGTSSGEIRTKRRMSDNDLKSHPLL 630

Query: 126 VQATDTGGKSSQTIVEVSVV 145
           V  +D G  S    V + VV
Sbjct: 631 VLVSDNGEPSLSATVSIEVV 650



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 17/115 (14%)

Query: 32  AASVPVSLT----VNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
           A S+P+S T    V ++D+NDNAP  P   +     +  +    I K+ A D D+  NA+
Sbjct: 415 AGSLPLSSTAVINVQVSDVNDNAPTFPEGAMNVYVRENSQVGNVITKVTAHDADIDDNAD 474

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--------ITVQATDTG 132
           +TY +    ++   K +I     +   TG+++A + +           VQATD+G
Sbjct: 475 LTYFLI---DSNSWKTQISSILNINSKTGEIMAMQSFDYEKLKTFQFKVQATDSG 526


>gi|60279665|ref|NP_001012504.1| protocadherin 15b precursor [Danio rerio]
 gi|57471176|gb|AAW50924.1| protocadherin 15b [Danio rerio]
          Length = 1907

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-----IQIQAGEARRQIVKI 73
           + F +IA +  G   S PV++ + + D NDN P  P +         +Q G+    ++++
Sbjct: 484 YAFTMIASD--GVQESAPVTINITVIDANDNTPTFPNVSYGVSVYTDMQPGDP---VLQL 538

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDT 131
            A D D G N  ++Y I    + G   F I+  +GVI    +  L  G  Y++TV+ATD 
Sbjct: 539 TALDADDGPNGLVSYKIL-AGDQG--HFTINDCTGVITVLPSVNLTVGRSYALTVRATDN 595

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           G     +SS T V + V+P  N   P F Q  Y + +SE     +T+  I
Sbjct: 596 GPTAQRRSSITTVYIEVLPPNNQSPPRFHQLVYSLEISEAMRTGATLLNI 645



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 13/182 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPP-I 59
           L++  + LDR+  +   +   V A + +    S   ++ + + D+NDN P   P++P  +
Sbjct: 676 LLLLAKTLDREITD--XYTLTVTASDGKPDGTST-TTVNIAVTDVNDNDPEFDPLLPLNL 732

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +Q  EA   + +++ATD DLG+N ++ Y +  VS   L  FRI P +G I T   L   
Sbjct: 733 TVQEEEANAFVGQVKATDLDLGINGQVRYRL--VSYPDL--FRISP-NGSIFTAMPLDRE 787

Query: 120 E--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           E  QY + VQA+D      +T + +S+ V   +  SPVF    Y   + E + + + +  
Sbjct: 788 ERAQYDLIVQASDGAKDPRRTTITLSITVLDVDDNSPVFSPPAYHATLPENSPVGTVILN 847

Query: 177 IT 178
           I+
Sbjct: 848 IS 849


>gi|395816056|ref|XP_003781529.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Otolemur
           garnettii]
          Length = 3374

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 20/196 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 498 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 555

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I TT
Sbjct: 556 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGII-TT 608

Query: 114 GKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
             L+  E   Q  + V A D G     +   VSV +   N   P FQ+  Y+ ++ EG  
Sbjct: 609 SALLDYELEPQPQLIVVAMDGGLPPLSSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQ 668

Query: 170 INSTVATITVSRLASG 185
             +    +T +   SG
Sbjct: 669 PGTCFLQVTATDADSG 684



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 37/179 (20%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPR----------LPMIPPIQIQAGE 65
            ++  Q++A +   +G A     +LTV + D+NDNAP           L   PP     G 
Sbjct: 2420 RYHLQLLAHDGPHEGCA-----NLTVLVEDVNDNAPAFSQSLYQVTLLEHTPP-----GS 2469

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---- 121
            A   I+ + ATD D G N  I+   YH+++     F +DP +G + TT + +A +     
Sbjct: 2470 A---IISVSATDRDSGANGHIS---YHLASPAA-GFSVDPNNGTLFTTVETVALDHEGPG 2522

Query: 122  -YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               + ++A D G  G+++Q +V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2523 VVDVVLEARDHGAPGRAAQAMVHVQLQ-DQNDHAPSFTLPHYRVAVTEDLPPGSTLLTL 2580



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 61/139 (43%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LT+++ D+ND AP        Q +     R+       ++ + ATD DLG N ++TY   
Sbjct: 1711 LTISVADVNDEAPAF-----QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGV 1765

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
               N     F +DP +GV+ T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1766 SGEN-----FSLDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPQLTHVTVRVAVEDE 1820

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1821 NDHTPTFGSAHLSLEVPEG 1839



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2215 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADD 2273

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2274 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RLVLMATDRGSP 2331

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2332 SLVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2386



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 11/162 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + +TV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1897 FQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPTYSVEVPEDVPAGTLLLQLQA 1955

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +T   Y++       F ++P SG + T   L   +   Y+ +V A D   
Sbjct: 1956 HDPDAGANGRVT---YYLGTGTAGAFLLEPSSGELRTAIALDREQCPSYTFSVSAVDGAA 2012

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             G  S T+     V   N  +P F  +   + +     I ST
Sbjct: 2013 AGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPILST 2054



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 15/138 (10%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNA 84
            ++ GTA     ++ V++ + ND++PRL   P     A        + +I ATD D G N 
Sbjct: 1160 QQTGTA-----TVRVSILNQNDHSPRLSEDPTFLAVAENQPPGTSVGRIFATDRDSGPNG 1214

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG--KSSQTI 139
             +TYS+  +S      FRI P++G + TT +++  EQ   Y + VQ  D G   +S+   
Sbjct: 1215 RLTYSLQQLSEDS-KAFRIHPQTGEM-TTLQILDREQQSSYQLLVQVQDAGNPPRSTTGT 1272

Query: 140  VEVSVVPGPNTRSPVFQQ 157
            V ++V+   N  SP F Q
Sbjct: 1273 VHIAVL-DLNDNSPTFLQ 1289



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 24/200 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L  + E +  D   PG     + AR+      +    + V L D ND+AP    +P  ++
Sbjct: 2507 LFTTVETVALDHEGPGVVDVVLEARDHGAPGRAAQAMVHVQLQDQNDHAPSF-TLPHYRV 2565

Query: 62   QAGE---ARRQIVKIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPR-----SGV--- 109
               E       ++ +EATD D    +A + YSI  +S      F+++PR      GV   
Sbjct: 2566 AVTEDLPPGSTLLTLEATDADGSRTHAAVDYSI--ISGNRGRVFQLEPRLAEAGEGVGPG 2623

Query: 110  IETTGKLIAGE--------QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
             +  G L+  E        QY++TV A D G     + V V+V +   N   PVF Q +Y
Sbjct: 2624 PQALGCLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASY 2683

Query: 161  DVNVSEGASINSTVATITVS 180
             V V E   + + +  +  S
Sbjct: 2684 RVAVPEDTPVGAELLHVEAS 2703



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L + L DIND+AP     R   +
Sbjct: 283 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDITLLDINDHAPAFNQSRYHAV 339

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L
Sbjct: 340 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPL 396

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 397 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 456

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 457 PGQLVARISVS 467



 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++     S  V +TV + D+NDN       PP+  QA              
Sbjct: 2643 QYNLTVAAADRGQPPRSSAVPVTVTILDVNDN-------PPVFTQASYRVAVPEDTPVGA 2695

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++ +EA+D D G +  + +++     +GL  F +D  SG +     L    Q  + + V
Sbjct: 2696 ELLHVEASDADPGPHGLVRFTLSSGDPSGL--FELDESSGTLRLAHSLDCETQARHQLVV 2753

Query: 127  QATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   +EV  V   N   P F  N    +++E     + V T+
Sbjct: 2754 QAADPAGAHFALAPVTIEVQDV---NDHGPAFPLNLLSTSLAENQPPGTLVTTL 2804



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 20/146 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 958  VLLDDVNDNSPAFPASEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLLGGG 1013

Query: 95   NTGLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGP 148
                  F +DP +G   ++E  G    G  + + ++A D G     +   + VV    G 
Sbjct: 1014 GG---AFTVDPTTGHVRLMELLGP-PGGPVHELELEARDGGSPPRTSHFRLRVVVQDLGT 1069

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +P F+   Y V++  G +  + V
Sbjct: 1070 HGLAPRFESPIYRVDLPSGTTPGTQV 1095



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 8/151 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDND 79
              V AR++        V++ V + D ND+ P        +++  G+  + +  + A+D D
Sbjct: 1795 LTVYARDRGSPPQLTHVTVRVAVEDENDHTPTFGSAHLSLEVPEGQDPQTLTVLRASDPD 1854

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKS 135
            +G N ++ Y I     +G   F +D  SG   T   L       + + ++A D G    S
Sbjct: 1855 MGANGQLQYRILDGDPSG--AFVLDLDSGEFGTMRPLDREVEPAFQLRIEARDGGQPALS 1912

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +  +V V+V+   N  +P F   TY V V E
Sbjct: 1913 ATLLVTVTVLDA-NDHAPAFPVPTYSVEVPE 1942



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 26/174 (14%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2748 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2804

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVI--------ETTGKLIAGEQYS 123
             A D D G    + YS+        G   F ++  +G +        E TG       + 
Sbjct: 2805 HAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTGS------FR 2858

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + V ATD G  S+   V V +V G +   PVF    +   V EGA    ++  +
Sbjct: 2859 LLVGATDAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGAQRGHSLGHV 2911



 Score = 39.3 bits (90), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 182 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQSRAALQV 228

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G    FR++ R G        +  
Sbjct: 229 PEHTALGTRYPLEPARDADAG---HLGTQGYALSGDGAGDIFRLETRPGPDGAPVPELVV 285

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++++++   N  +P F Q+ Y   VSE  
Sbjct: 286 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDITLL-DINDHAPAFNQSRYHAVVSESL 344

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 345 APGSPVLQVFASDADAGA 362



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDN+P        RLP   P    A       + + A D DLG  A ++Y +   +
Sbjct: 1612 VTDENDNSPVFASPSRVRLPEDQPPGPVA-------LHVVARDLDLGEAARVSYRL---A 1661

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
              G   FR+   +G +     L   +Q  + +TV A+D G   +S+  ++ +SV    N 
Sbjct: 1662 AGGDGHFRLHSSTGALSVVRPLDREQQAEHILTVVASDHGSPPRSATQVLTISVA-DVND 1720

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E +   +++ T+
Sbjct: 1721 EAPAFQQQEYSVLLRENSPPGTSLLTL 1747


>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Bombus impatiens]
          Length = 4964

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 11/170 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEA 75
            +   V+A +      S    + VN+ D N+NAPR      + P+    G  +R +V++ A
Sbjct: 2967 YSLTVVATDNGKPPLSSKTVVYVNVVDANNNAPRFDQRSYLYPVPENYGVGKR-VVQLTA 3025

Query: 76   TDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDT 131
             D+ D GVNAEI+Y + +V+  G   F ID +SG +    T   +     + + VQA D 
Sbjct: 3026 KDDADFGVNAEISYFMTNVN--GTEYFSIDEKSGWVYVRNTLSNVPVRTTFLLKVQAIDK 3083

Query: 132  GGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G    +  V ++ V+ G N  +P F   ++ V V E   +N+T+ T++ +
Sbjct: 3084 GVPPQKDEVSLTLVISGENKHAPTFAAVSHQVRVPENEPVNTTILTVSAT 3133



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 77/164 (46%), Gaps = 17/164 (10%)

Query: 37   VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V+LT+ + D+NDNAPR   P        A +    +   +A D+D G N+ I   +Y + 
Sbjct: 2462 VNLTIFVKDVNDNAPRFSSPRYTAYVPGATKPGDFVFGAKAVDDDDGENSRI---VYRLQ 2518

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTGGKSSQTIVEVSVVP------G 147
                 KF IDP SGVI TT +L   E  Y + +QA+D G K  QT+    V+        
Sbjct: 2519 GIDAEKFVIDPNSGVIRTTQELANDETTYQLQIQASDCGVK-PQTVTADLVIHLWERQLF 2577

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATI----TVSRLASGCA 187
            P+ RS +  + T   +V EG  I    AT     T S L  G A
Sbjct: 2578 PSFRSTISTRFTLPEDVPEGRVITKLSATTPKVGTASNLVYGMA 2621



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQ-IQAGEARRQIVK-IEA 75
           V AR+           +TVNL D ND+ P +     P  P    +    A+  IV  +  
Sbjct: 298 VFARDHGSPRQDGRTYVTVNLLDANDHDPEIKFSYFPSTPGFATVDENAAKDSIVAAVAV 357

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRID--PRSGVIETTGKLIAGE--QYSITVQATDT 131
            DND G+N E T  I   +   L  FR+D  P   ++   G+L   E  +Y++TV ATD 
Sbjct: 358 IDNDEGLNGETTVEIR--AGNELGHFRLDNTPSFDIVRVNGRLDREEIPKYNLTVVATDK 415

Query: 132 GGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           G    S T   V  V   N   PVFQQ+ Y   +SE +   S VA+I+ +   SG
Sbjct: 416 GTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISATDADSG 470



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 14/152 (9%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
            S  V +TV L D+ND +P    I P +I   E   +   ++ I+A D D G N  + YS+
Sbjct: 2036 SCTVQVTVVLLDVNDMSPEF--ISPTKISIIENAPSNTVVMAIKAVDRDEGRNGYVEYSL 2093

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVP 146
                +T L  F + P  G++  +G L       Y++ V A D G   +SS T V V+V+ 
Sbjct: 2094 ---EDTTL-PFTVGPVDGLLRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTAVTVTVL- 2148

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N  SPVF    Y   V+E ASI ++V  ++
Sbjct: 2149 DENDNSPVFDPRQYSATVAENASIGASVLQVS 2180



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 10/145 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P+   +P  +Q+  G A   Q++++  TD D G+N ++ YS+   +
Sbjct: 1167 VKVVIYITDVNDNIPQFQRLPYKVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGN 1226

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPN 149
              G  +F ID  +G I  T +L     + Y +TV A D G +   SS T V + V+   N
Sbjct: 1227 QHG--RFAIDEATGQISLTKELDRETTDAYVLTVVAHDAGLETRLSSSTTVHIEVL-DEN 1283

Query: 150  TRSPVFQQNTYDVNVSEGASINSTV 174
               P+F  +   ++V E    N+ +
Sbjct: 1284 DNVPLFVDDKSSISVLETTPTNTEL 1308



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 12/149 (8%)

Query: 38  SLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHV 93
           S+ + + DINDN PR P   +   + ++   A  Q V +  A D D   NA I YS+ H 
Sbjct: 849 SVNITVLDINDNPPRFPKGEIGDEVLLKENAAVGQEVCLARARDRDASANARIVYSLTH- 907

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
            N G  +FR+   SG+I     + A  G    + V ATD+G +  S+Q  V V+ +   N
Sbjct: 908 -NPG-GQFRVAENSGIIYLDKPIRAAPGTVLHLEVTATDSGNQPLSAQHQVRVT-IEDVN 964

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +PVF+  +Y+ ++ E   +N    ++T
Sbjct: 965 DHTPVFKLTSYETSLPESTPVNDRFFSLT 993



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIP 57
           + +K NLDR+     +++  VIA+++     S   ++ + L D+NDN+P     R  M  
Sbjct: 605 LTTKVNLDRE--TTAEYQILVIAKDQGTPPQSSTATVILTLEDVNDNSPVFYPWRYLMPI 662

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +   + K+ ATD D   NA++ YS+    + G   F +D R+G I   G L 
Sbjct: 663 PEDAPPGTS---VGKVTATDADARENAQVRYSL---ESGGEGLFTVDERTGEITLQGSLR 716

Query: 118 AGEQ--YSITVQATDTGGK 134
           A  +  Y + + A DTG +
Sbjct: 717 AAHKTLYELNISAKDTGDR 735



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 27/181 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----------IPPIQIQAGEAR 67
            +   V  R+    A    V L VN+ D NDNAP +              PP+ +      
Sbjct: 2652 YEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPIMEAAIYNATVPEDEYPPLFVN----- 2706

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
                K+ A D D G N +++Y   ++ N     F ID  +G I T  KL   E   Y + 
Sbjct: 2707 ----KVSANDRDSGENGQVSY---YLVNDFTETFVIDSDTGEISTNAKLDREEIASYELI 2759

Query: 126  VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            V+A D G  S + T   +  V   N   P F +  + VNV+E A I + V  IT S L  
Sbjct: 2760 VEARDQGQPSLTGTATVLLTVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSDLDI 2818

Query: 185  G 185
            G
Sbjct: 2819 G 2819



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            ++LT+ + D NDNAP           P  +  G    Q+V  +A  N  G N++++Y++ 
Sbjct: 1826 IALTIQVTDTNDNAPTFQSTAYSFDVPENVPRGSRIGQVVATDADAN--GPNSQLSYTL- 1882

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVEVSVVPG 147
             +S+     F ++P +GV   T  L     + Y + VQATD G    SS   V  +VV  
Sbjct: 1883 -ISDWANDVFSLNPSTGVFTLTASLDYEQVQHYILVVQATDGGIPALSSTVTVYCNVV-D 1940

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N  +P+F+   +  ++ E  +I + + ++    L SG
Sbjct: 1941 LNDNAPIFEAGPHAADIVENTTIGTPILSVAAQDLDSG 1978



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
           K+   V+A +K     S    L +++ND+ND+ P         +  +       +  I A
Sbjct: 405 KYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISA 464

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG-- 133
           TD D G+NA I Y     +  G   F ID  +G++ T   L    Q SI +  +   G  
Sbjct: 465 TDADSGLNARIYYDFDSGNEQGW--FAIDQDTGLVTTVATLDREVQGSIELHVSARDGGP 522

Query: 134 --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             K + T ++V+++   N  +P F QN   V +SE
Sbjct: 523 NPKYASTHLKVTIL-DENDEAPRFSQNVVRVTLSE 556



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITV 126
            ++++ +ATDNDLG N+E+ ++I   +      F IDP +G +     L     E+Y++ V
Sbjct: 1307 ELLRFKATDNDLGPNSELAFAI--SAGNRRDTFYIDPLTGTLYLRKPLDYEELEKYTLNV 1364

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +D G    SS T + V V+   N   PVF        + EG  +++ + TIT
Sbjct: 1365 TCSDGGHPRLSSVTTLIVEVIDA-NDNPPVFPNTAIARQIREGILVHTPIVTIT 1417



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 24/195 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
            V+ +E LD        +  +V A ++   + S  V + V++ D NDNAP       +  +
Sbjct: 1031 VLDREELD-------YYALEVTATDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFVLHL 1083

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG----KL 116
            +  E     V K+ ATD D+G NA++ +S+          F +DPR+G I++      +L
Sbjct: 1084 RENEPPDTFVGKLLATDRDVGRNADLVFSL----PASQQDFTVDPRNGFIKSLRVFDREL 1139

Query: 117  I---AGEQYSITVQAT--DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
            +    G  Y IT++AT  D G    +  V+V + +   N   P FQ+  Y V V+EGA+I
Sbjct: 1140 LVTNTGSSY-ITLEATVTDNGVNRLRDRVKVVIYITDVNDNIPQFQRLPYKVQVNEGAAI 1198

Query: 171  NSTVATITVSRLASG 185
             + +  +  +    G
Sbjct: 1199 GTQLLRVYTTDADEG 1213



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 25/185 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR- 67
           LDR+  +  +F   V++ +      + P+ + + + DINDN P  P    I +   E+  
Sbjct: 59  LDREALSSDRFDLVVLSSQ-----PTYPIEVRILVLDINDNDPEFPE-SSIAVSFSESAV 112

Query: 68  --RQIVKIEATDNDLGVNAEIT-YSIYHVSNTGLHKFRID----PRSGV----IETTGKL 116
              +++   ATD D   N  +  Y I + +  G  KFR++    P        +ETTGKL
Sbjct: 113 VGTKLLLDAATDKDTLENGVVDDYFIVNGNTDG--KFRLEVTGNPTGETSYLHLETTGKL 170

Query: 117 IAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                E YS+ V A D G   +    +V V+V+   N   P+FQQ+ Y V ++E A + +
Sbjct: 171 DREQVEFYSLNVCARDRGRPPRLGYLLVNVTVL-DVNDNPPIFQQSDYVVALNESAPVGT 229

Query: 173 TVATI 177
            V T+
Sbjct: 230 KVLTV 234



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   V AR++   + +   ++ + + D NDN P+   +  + + +  E  
Sbjct: 2748 LDRE--EIASYELIVEARDQGQPSLTGTATVLLTVLDKNDNPPQFTRLFSVNVTENAEIG 2805

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              +++I ++D D+G NA +TY      N G  KF +D  SG +   G L   EQ  Y + 
Sbjct: 2806 TFVIRITSSDLDIGQNANVTYRF--TENPG-EKFAMDALSGNVTVDGHLDREEQDEYLLK 2862

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            + A D G   + T + ++ +   N   P F + +Y  +  E
Sbjct: 2863 LVAAD-GAWQAATALTIT-IQDQNDNPPEFDEESYHFHFPE 2901



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV +   LDR+    G     V AR+           L V + D ND APR      +++
Sbjct: 496 LVTTVATLDREVQ--GSIELHVSARDGGPNPKYASTHLKVTILDENDEAPRFSQ-NVVRV 552

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
              E          + A DND G N  + YS +  VS      F +D  +G + T   L 
Sbjct: 553 TLSENTXXXXXXXXLTAVDNDQGTNGSVAYSFHSSVSRDYPKTFALDGLTGQLTTKVNLD 612

Query: 118 --AGEQYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                +Y I V A D G    S T   +  +   N  SPVF    Y + + E A   ++V
Sbjct: 613 RETTAEYQILVIAKDQGTPPQSSTATVILTLEDVNDNSPVFYPWRYLMPIPEDAPPGTSV 672

Query: 175 ATITVS 180
             +T +
Sbjct: 673 GKVTAT 678



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++  +N+  P+   P+      ++ E    +  ++ATD D G +  + Y     SN
Sbjct: 3265 TVLVHITGVNEYYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDAGEDGRVYYLFVGSSN 3324

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG----KSSQTIVEVSVVPGPN 149
                       +G+I  + +L    Q  +  TV   + GG     + +  V VS+  G +
Sbjct: 3325 DRGFSIGXGSETGIIRVSRRLDRETQNRVVLTVMTKNGGGIRGNDTDEAQVIVSIQDGND 3384

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F QNTYD  VSEGA+  + V T+
Sbjct: 3385 --PPEFLQNTYDATVSEGAAHGTRVLTV 3410



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 25/164 (15%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +  +V A+++     S   ++TV + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2123 YTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSP---VFDPRQYSATVAENASIGASVLQV 2179

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----------IAGEQY 122
             A D D G N  + Y I    +     F I    GVI     L           I GE  
Sbjct: 2180 SAMDRDEGANGRVRYGIAMGDDN--RDFTISEDGGVIRVAKNLNFERKSRYYLTIRGEDC 2237

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +  V  T  G  +  TI  + +    N  +PVF  + Y  +V E
Sbjct: 2238 ASEVGETPRGDTAQVTITVIDI----NDNAPVFLDSPYLAHVME 2277


>gi|395527430|ref|XP_003765850.1| PREDICTED: protocadherin-9-like [Sarcophilus harrisii]
          Length = 1032

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTGG-KSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLP------M 55
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTG 114
           IP    +       ++++ ATD D+G NAEI Y     V+      F ++  +G+I    
Sbjct: 261 IP----ENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQR 316

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSE 166
            L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE
Sbjct: 317 SLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSE 375

Query: 167 GASINSTVATITVS 180
              +N+ +A ITVS
Sbjct: 376 KDPVNTKIALITVS 389


>gi|326670102|ref|XP_001922712.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Danio
            rerio]
          Length = 3584

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
            +   + AR+      S    + VN+ND+NDNAP+  + P  Q    E       +++I A
Sbjct: 1246 YTLAITARDNGIPQKSDTTYVEVNVNDVNDNAPQF-LSPRYQGGVSEDAPPFTSVLQISA 1304

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG 133
            TD D   N  + Y+ +     G   F I+P SG++ T  +L       Y +T  A D G 
Sbjct: 1305 TDRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDRESVPFYELTAFAVDRGV 1363

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               +T V + V V   N  +PVF  + ++V V E +++ S VA IT +
Sbjct: 1364 PPQRTPVHIQVSVMDVNDNAPVFPADDFEVLVKENSAVGSVVAQITAT 1411



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            +V I ATD+D+G NA ITY +       + +FRIDP SG I    +L   +Q  Y++ + 
Sbjct: 1196 VVVISATDDDVGENARITYYL----EDNIPQFRIDPASGAITLQAELDYEDQMTYTLAIT 1251

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   KS  T VEV+ V   N  +P F    Y   VSE A   ++V  I+ +
Sbjct: 1252 ARDNGIPQKSDTTYVEVN-VNDVNDNAPQFLSPRYQGGVSEDAPPFTSVLQISAT 1305



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+  +   FR  V A +      S    +T+ + D ND++P        Q 
Sbjct: 705 LLTTTHILDREHMDLHYFR--VTAADHGSPHLSGTTMVTITVADRNDHSPVFE-----QT 757

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETT 113
           +  E  R+       I+++ ATD D   NA I Y     S       F IDPRSG+I T 
Sbjct: 758 EYRETIRENVEEGYPILQLRATDLDSTANANIRYRFVGESAAVARSAFEIDPRSGLITTR 817

Query: 114 GKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +     E+Y++ V+A+D G   G  S T+     V   N   P F Q  Y V V E  
Sbjct: 818 GIVDRETNERYTLLVEASDQGREPGPRSATVSVHITVLDENDNVPQFSQKRYVVAVREDV 877

Query: 169 SINSTVATITVS 180
             +S +  I+ +
Sbjct: 878 RPHSEILRISAT 889



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q   A  Q     ++ + A D+D G    ++YS+  + N+  +  F+I
Sbjct: 640 ANRQPQFPQYNYQVQVAENQPPGTSVIAMTAEDHDAGEAGRLSYSMAPLMNSRSMDYFQI 699

Query: 104 DPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP +G++ TT  L       +   V A D G    S  T+V ++V    N  SPVF+Q  
Sbjct: 700 DPITGLLTTTHILDREHMDLHYFRVTAADHGSPHLSGTTMVTITVA-DRNDHSPVFEQTE 758

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 759 YRETIRENVEEGYPILQLRAT 779



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 19/188 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            ++ VS E LDR+      + F V AR+      S   S+T+ + D+NDN P   +     
Sbjct: 1026 WVTVSSE-LDRESVE--HYFFGVEARDYGSPPLSATASVTITVMDVNDNRPEF-LQKEYY 1081

Query: 61   IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR--SGVIETTGK 115
            ++  E       +V + A D D  VN+ +TY I        ++F I     +G++     
Sbjct: 1082 VRLNEDAAVGTSVVSVTAVDRD--VNSAVTYQI--TGGNTRNRFAISTAGGAGLVSLALP 1137

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            L   ++  Y +TV A+D   ++     +V + +   NT  PVFQ   Y V+V+E     S
Sbjct: 1138 LDYKQERRYVLTVTASD---RTLHDTCQVHINITDANTHRPVFQSAHYSVSVNEDRPPGS 1194

Query: 173  TVATITVS 180
            TV  I+ +
Sbjct: 1195 TVVVISAT 1202



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 12/160 (7%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGV 82
            RE    +A+V V +TV   D NDN P+      +     + R   +I++I ATD D   
Sbjct: 838 GREPGPRSATVSVHITVL--DENDNVPQFSQKRYVVAVREDVRPHSEILRISATDQDKDG 895

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQ 137
           NA + Y+I  +S     +F ID  +G I+    L      +Y++ ++A D G     ++ 
Sbjct: 896 NAAVHYNI--ISGNSRGQFAIDSVTGEIQVVAPLDFETEREYTLRLRAQDNGRPPLSNNT 953

Query: 138 TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            IV V V    N   P+F    +   V E A I  ++  I
Sbjct: 954 GIVSVQVT-DVNDNPPIFVSTPFQATVLESAPIGHSILHI 992



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 36   PVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHV 93
            PV + V++ D+NDNAP  P     + ++   A   +V +I ATD D G NA+I Y I  V
Sbjct: 1369 PVHIQVSVMDVNDNAPVFPADDFEVLVKENSAVGSVVAQITATDPDEGPNAQIMYQI--V 1426

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
                   F++D  SG + +   L      +Y I VQAT
Sbjct: 1427 EGNIPEIFQMDIFSGELTSLIDLDYETRNEYVIVVQAT 1464


>gi|350594501|ref|XP_003134187.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Sus scrofa]
          Length = 3938

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 21/185 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + +++ LDR+  +  K+  +V A + +  A+   V + + + D+NDN+P+   +    
Sbjct: 2910 WRIFARKTLDRE--HMAKYLLRVTASDGKFQAS---VLVEIFVLDLNDNSPQCSQL---- 2960

Query: 61   IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +  G+          I+KI ATD D   NA+ITYS++     G   F++DP +G + T  
Sbjct: 2961 LYTGKVSEDVPLGHFILKISATDLDSDTNAQITYSLH---GPGADDFKLDPHTGELITLT 3017

Query: 115  KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             L   ++  YS+  +ATD GG+S Q  V +  V   N  +P F  +   V V +  ++ +
Sbjct: 3018 ALDREKKDVYSLVAKATDGGGQSCQADVTLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3076

Query: 173  TVATI 177
             VA +
Sbjct: 3077 PVAVV 3081



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 41   VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ D+NDN P    +P    IQ G E    + ++ ATD DLGVN  ITY++        
Sbjct: 2002 VSIEDVNDNCPEFKHLPYHTIIQDGTEPGDVLFQVSATDQDLGVNGAITYALAE----DY 2057

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
              FRIDP  G I         A  +Y + V A D G  S QT  EV V+   N  +P+FQ
Sbjct: 2058 IYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQTEEEVLVIVR-NKSNPLFQ 2116

Query: 157  QNTYDVNVSEGASI 170
               Y V V E  ++
Sbjct: 2117 SPYYKVRVPENITL 2130



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 39   LTVNLNDINDNAP---------RLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            + V + D+NDN P         RLP  + P+    G   R +    A+D D G+N  +TY
Sbjct: 1227 VVVRILDVNDNPPVFSHKLFNVRLPERLNPVT--PGPVYRLV----ASDLDEGLNGRVTY 1280

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
            SI      G   F IDP +GV+ ++    AGE   +T++ATD+G    S+   + +  +P
Sbjct: 1281 SIEESDEEG---FSIDPVTGVVSSSSTFTAGEYNILTIKATDSGQPPLSATVRLHIEWIP 1337

Query: 147  GPNTRS-PV-FQQNTYDVNVSEGASINSTVATITV 179
             P   S P+ F ++ Y   V E   +N  V  I+V
Sbjct: 1338 QPRPSSIPLAFDESHYSFTVMETDPVNHMVGVISV 1372



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEA 75
            K+   +    K  ++ S   ++ VN+ DIN++ PR    +   ++        +V  + A
Sbjct: 3232 KYFLSIECSRKGSSSLSDMTTIVVNVTDINEHRPRFSQDLYSTRVSENAIVGDLVLTVSA 3291

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            TD D  +N+ ITYS+  V    L  F I P+ G ++   K +  EQ   YS+ ++ATD G
Sbjct: 3292 TDEDGPLNSAITYSL--VGGNQLGHFAIHPKKGELQ-VAKTLDWEQISSYSLRLRATDNG 3348

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                    +V++ V   N   P F Q  Y  +V E +   S V  + +S
Sbjct: 3349 QPPLHEDTDVAIQVVDVNDNPPRFFQLNYSTSVQENSPTGSKVLQLILS 3397



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEA 66
            LDR+     K  + ++A+   G   S    +T+++ D+NDNAPR  P    + +      
Sbjct: 3019 LDREK----KDVYSLVAKATDGGGQSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTV 3074

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSI 124
            +  +  + A D D G NA++ YS+   +++    F I+  +GVI  E   ++       +
Sbjct: 3075 KTPVAVVLARDPDQGTNAQVVYSL---TDSAEGHFSIEATTGVIRLEKPLRVRPKAALEL 3131

Query: 125  TVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
            TV+A+D G     S+   V +SVV G +   PVF    + V V E A   + V   AT+T
Sbjct: 3132 TVRASDLGTPIPLSTLGTVTISVV-GLDDYLPVFLSTEHSVQVPEDAQRGTEVLQLATLT 3190



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            + + + LDR+         +V+A++  G  A   V +   L D NDN P+       + I
Sbjct: 2481 ITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2538

Query: 62   QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            Q+  ++   ++++ A D D G NA++TYS+  V +       ++P +GV++    L+  E
Sbjct: 2539 QSNVSKDSPVIQVLAYDADEGQNADVTYSVDSVEDLEEEVIEVNPTTGVVKVKESLVGLE 2598

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
               + + ++A D G     +++ + +   PN  S P F +  Y  + SE     S + ++
Sbjct: 2599 NRAFDLKIKAQDGGPPHWNSLMLLRLQVVPNEVSLPKFSEPLYTFSASEDLPEGSEIGSV 2658



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 38   SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    ++    +  G  A+  ++ + A+D D G N +I+Y I    +
Sbjct: 2201 TVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAQTPVIHLLASDQDSGQNRDISYHIVEDGS 2260

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                 F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 2261 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVN-VSDINDN 2319

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P F+Q  Y+ NVSE A+    V  +
Sbjct: 2320 PPEFRQPQYEANVSELATCGHLVLKV 2345



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ + + D+NDN P     P   +  +       ++++ A D D G +  ++Y +    
Sbjct: 2727 VSVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGHVSYRLPVDP 2786

Query: 95   NTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK---SSQTIVEVSVVPGP 148
             + +H+ F ID  +G I T  +L     + Y   V A D G     SSQ +VEVS+    
Sbjct: 2787 GSNIHELFAIDSETGWITTLQELDCETSQIYRFYVVAHDHGQTIQLSSQVLVEVSIT-DE 2845

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  +P F    Y  +V E +     VAT+
Sbjct: 2846 NDNAPRFASEDYRGSVVENSEPGEPVATL 2874



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 17/164 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V++ D ND  P L   P  ++   E    +  I K+ ATD DLG NA      Y+  N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVSATDADLGQNA----GFYYAFN 188

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGP 148
           T    F I P SGV+   GKL      +Y + V A D   K S+      +  + +   P
Sbjct: 189 TRSEMFAIHPTSGVVTLAGKLNVTWRGKYELQVLAVDRMRKISEGNGFGNLAALVIHVEP 248

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKE 192
             R P+   +   +  +  +S ++T AT+ V   +SG  + + E
Sbjct: 249 ALRRPLAIASV--ILAAPDSSEDATYATVVVDASSSGVDVDSLE 290



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           LTVN+ D NDNAPR    PP   Q       E    + +++A D D   N  + Y++  +
Sbjct: 805 LTVNVEDWNDNAPRF---PPGGYQVTVSEDTEVGTTVAQLKAKDADSEDNGRVRYTL--L 859

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
           S T   +F + P +G +  TG L   +  QY + V+A D   K  Q
Sbjct: 860 SPT--EEFSLHPLTGELVVTGHLDRESESQYILKVEARDQPRKGHQ 903



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
            L  F  D ++GV+  TG L   +  ++  TV+ATDT  G  S+  VEV +V   N   P 
Sbjct: 2157 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2215

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F Q  Y  +VSEG    + V  +  S   SG
Sbjct: 2216 FSQLVYTTSVSEGLPAQTPVIHLLASDQDSG 2246



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ ATD D G N ++ Y I   +  G   F I   SG++     L   A   Y + V 
Sbjct: 733 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIGLESGLLTIASPLDYEATSFYILNVT 790

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ V+V    N  +P F    Y V VSE   + +TVA +
Sbjct: 791 VYDLGTPQKSSWKVLTVNV-EDWNDNAPRFPPGGYQVTVSEDTEVGTTVAQL 841



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 28/157 (17%)

Query: 38  SLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           ++ +++ D N++AP              IPP           ++ I ATD D G N  +T
Sbjct: 442 TVVIDIMDCNNHAPMFSKSSYESTFDENIPP--------GTSVLTITATDKDHGENGYVT 493

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV 144
           YSI   +      F IDP  G+I T+  +   +    Y+  V+A+D G    +   EVSV
Sbjct: 494 YSI---TRPNAVPFSIDPYLGIISTSKPMDYELMNRIYTFRVRASDWGSPFRRE-KEVSV 549

Query: 145 ---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +   N   P+F++     ++ +   +   V T++
Sbjct: 550 SLRLKNLNDNKPMFEEVNCSGSIHKDWPVGKAVMTVS 586



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 15/92 (16%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
            ++++++ATD D G    + Y+I+   + G    F++DP SGV+ T GKL  G    Q+++
Sbjct: 1465 ELLRVQATDQDKGKG--LIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLALGSGPSQHTL 1522

Query: 125  TV---------QATDTGGKSSQTIVEVSVVPG 147
            TV         + T  G ++S+    ++ + G
Sbjct: 1523 TVMSIRYERDAETTSPGARNSEGFFNINALLG 1554



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 5/108 (4%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            + A D+D G++ E+ Y +   + T L  F I   +G+I+T   L       Y +TVQA D
Sbjct: 1053 VAAQDDDSGLDGELQYFLR--AGTSLSAFSIHQDTGMIQTVAPLDREFMSCYWLTVQAVD 1110

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             G     ++ EV + V   N   P   +  +  +V E A ++++V  +
Sbjct: 1111 RGSVPLSSVTEVYIEVTDVNDNPPQMSRPVFYPSVREDAPLHTSVLQL 1158



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 4/159 (2%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
             F  +V A ++     +    + VN++DINDN P  R P       +       ++K++A
Sbjct: 2288 HFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA 2347

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
             D D G  + + Y I   +               +    K      Y++ V A+D  G  
Sbjct: 2348 LDPDSGDTSRLEYLILSGNQDRHFSINSSSGIISMFNLAKKHLASSYNLRVGASD--GVF 2405

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              T+         N  SP FQQ+ Y+  ++E A + + V
Sbjct: 2406 RATVPVYINTXNANKYSPEFQQHVYEAELAENAKVGTKV 2444



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 31/196 (15%)

Query: 8    NLDRDPPNPGKFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAP-------RLPM--- 55
            +LDR+  +  ++  +V AR+  ++G        L V L D NDN+P       RL +   
Sbjct: 879  HLDRE--SESQYILKVEARDQPRKGHQLFSVTDLIVTLEDANDNSPQCITELRRLKVPED 936

Query: 56   IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +PP  I        +  ++A+D DLG   E+ Y +   ++   H   ++P +G +    +
Sbjct: 937  LPPGTI--------LTFLDASDPDLGPAGEVQYVLLDDAHGTFH---VNPMTGALSLERE 985

Query: 116  LIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGAS 169
            L    +  Y++++ A+D+G    + +   VEV V+    N   P F    +   V E + 
Sbjct: 986  LDFERRAGYNLSLWASDSGRPIARRTLCHVEVIVLDVNENLHPPRFASFVHQGQVQENSP 1045

Query: 170  INSTVATITVSRLASG 185
              ++V  +      SG
Sbjct: 1046 SGTSVTVVAAQDDDSG 1061



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 100  KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQ 156
            +FR+D R+G++     L      +Y ++++ +  G  S   +  + V V   N   P F 
Sbjct: 3209 RFRLDARTGILYVNKSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNVTDINEHRPRFS 3268

Query: 157  QNTYDVNVSEGASINSTVATITVS 180
            Q+ Y   VSE A +   V T++ +
Sbjct: 3269 QDLYSTRVSENAIVGDLVLTVSAT 3292



 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIV 140
            ++E+TY +   +  G+  F ++  SG+I T   L   +   Y + ++ ++  G  +  +V
Sbjct: 1631 SSEVTYELREGNKNGV--FSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMV 1688

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             V ++   N  +P+F ++T+   VSE A +NS +
Sbjct: 1689 LVYII-DENDNAPMFSKSTFVGQVSEAAPLNSMI 1721


>gi|332234728|ref|XP_003266556.1| PREDICTED: protocadherin beta-13-like [Nomascus leucogenys]
          Length = 801

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E     + VA  
Sbjct: 312 KLQSYEVNIEARDAGGFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPIPENQP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|292616200|ref|XP_001920988.2| PREDICTED: neural-cadherin-like [Danio rerio]
          Length = 2518

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 23  VIAREKQGTAASVPVS----LTVNLNDINDNAPRL-PMIPPIQIQAG-EARRQIVKIEAT 76
            + R +    A VP++    + +N+ D+NDN P     I    +  G E    ++++ A 
Sbjct: 661 FMLRVRAQNVAPVPLAAFTTVHINITDVNDNVPFFTSSIYEASVTEGVEIGTLVLQVSAN 720

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---- 130
           D DLG+N +I+YS+ +  +     FRIDP  G I T        +  Y + V++ D    
Sbjct: 721 DLDLGLNGKISYSLLNDRSGDFQYFRIDPELGTIFTEAVFDRETKGSYLLEVKSVDGWES 780

Query: 131 -----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                 G  +S T      +   N   PVF Q  Y+V+V E A + STV T++
Sbjct: 781 ARPGKHGQPNSDTAYVRIFISDVNDNKPVFAQPVYEVDVDEDADVGSTVLTVS 833



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 17/183 (9%)

Query: 11  RDPPNPG----KFRFQVIAREKQGTAA----SVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           R  P+P     K+   V A +   +      S    + V ++D+N+N P        + +
Sbjct: 324 RSSPSPRLQGLKYMLNVTATDDNASGGPQSLSAVAQVIVGVDDVNNNKPVFEKCAEYKEK 383

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           A       A   ++++ A D D G N ++TY   H  +T +  F IDP +GVI T  K  
Sbjct: 384 ASVLENKPAGSFVLQVHADDADEGANGKVTYGFMHKDST-VPAFSIDPETGVIVTAIKFD 442

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              Q  Y++TV ATD        I ++++ +   N  +P F+   Y+  + E   I ++ 
Sbjct: 443 RESQREYAVTVTATDQAADPLIGICQLNILILDENDNNPKFENLRYEYFLREDTMIGTSF 502

Query: 175 ATI 177
             +
Sbjct: 503 LRV 505



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 24/201 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + ++  LDR+      +RF V+A ++ G   +    + +N+ DINDNAP     P     
Sbjct: 971  IYAQRTLDREVR--AVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPIFACAPD-SCH 1027

Query: 63   AGEARR-----QIVKIEATDND---LGVNAEITYSI-----YHVSNTGLHKFRIDPRSGV 109
               A        ++++ ATD D   +G NA + Y I      + +N G   F I+P +G 
Sbjct: 1028 GDVAENSPPGTSVMEMTATDLDDAAVGQNAMLAYRIVGNAALNGANNGADMFNINPATGT 1087

Query: 110  IETTGKLIAGEQ---YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            +  +   +  EQ   Y + V+A D GG   S+   + V+ V   N   P F   +  V +
Sbjct: 1088 VSVSMSGLDREQIDSYVLVVEARDGGGMIGSATATIHVTDV---NDHIPRFLDRSCFVRI 1144

Query: 165  SEGASINSTVATITVSRLASG 185
             E +  N+ V  +      +G
Sbjct: 1145 PESSEPNTAVIELAAEDADAG 1165



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP----RLPMIPPIQI 61
            K+ LD + P   +F   +   + Q    S  +  T+ + D ND+ P        +P I+ 
Sbjct: 1199 KKRLDYERPGEQRFNLTIKVEDMQ---YSTLLHCTLEIEDCNDHVPVFIPHFLQLPAIRE 1255

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE- 120
                    +  + A+D DLG+N EITY+I   S+   H F +D +SG++    +L   + 
Sbjct: 1256 DVAPGT-SLASVAASDLDLGLNREITYTIAAESDP-YHLFSVD-QSGLVTVASELDREKV 1312

Query: 121  -QYSITVQATDTG 132
             Q+ + + A D G
Sbjct: 1313 AQHHLVILAADHG 1325



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA 84
           K G   S    + + ++D+NDN P     P  ++   E       ++ + A D D G NA
Sbjct: 785 KHGQPNSDTAYVRIFISDVNDNKPVFAQ-PVYEVDVDEDADVGSTVLTVSANDEDEGANA 843

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
           ++ Y I   +  G+  F ++P  G I     L   +   Y + V A+D   +   T++ V
Sbjct: 844 KLRYQITSGNVGGV--FDMEPEVGTIFIAQPLDYEQNKLYKLHVLASDGKWEHYATVI-V 900

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSE 166
           ++V   N  +PVF  N Y  +V+E
Sbjct: 901 TIV-NKNDEAPVFSVNEYYGSVTE 923



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            +++ A D+D   NA ITYS+   S       +++P +G +     +      S  + AT
Sbjct: 502 FLRVAAHDDDYSTNAAITYSM---SEEQPEYLQVNPLTGWVYVNQPISQRTYISRQIIAT 558

Query: 130 DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           D G +SS   + V++    N + P ++++ Y+V + E    ++ V TI
Sbjct: 559 DGGNRSSSVELAVTITNVKN-QPPQWEKDKYEVVIPENTVRDTPVVTI 605


>gi|296192993|ref|XP_002744345.1| PREDICTED: protocadherin beta-13 isoform 1 [Callithrix jacchus]
          Length = 798

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 8/145 (5%)

Query: 45  DINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D+NDNAP     P  ++Q  E       +VK+ ATD D GVN EI+YS++  S+     F
Sbjct: 235 DVNDNAPEFEQ-PFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASDEIGKTF 293

Query: 102 RIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
           +I+P +G IE   +L     + Y + V+A D G  S +  V + V+   N  +P    + 
Sbjct: 294 KINPLTGEIELKKQLDFENLQSYEVNVEARDAGTFSGKCTVLIQVM-DVNDHAPEVTMSA 352

Query: 160 YDVNVSEGASINSTVATITVSRLAS 184
           +   + E A   + VA  +VS L S
Sbjct: 353 FTSPIPEDAP-ETVVALFSVSDLDS 376



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 16/165 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y ++++  LDR+  +  ++   +   +         +++TV ++D+NDNAP         
Sbjct: 401 YTLLTERPLDRESRD--EYNITITVTDLGAPRLKTQLNITVLVSDVNDNAPTFTQTSYTL 458

Query: 61  I--QAGEARRQIVKIEATDNDLGVNAEITYSIY-----HVSNTGLHKFRIDPRSGVIETT 113
              +       I  + ATD D G NA++TYS+      H+    L    I+P +G +   
Sbjct: 459 FLRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASL--VSINPDNGHLFAL 516

Query: 114 GKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             L   A + +   V ATD G    SS+ +V V V+   N  SP 
Sbjct: 517 RSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDA-NDNSPF 560


>gi|432929722|ref|XP_004081245.1| PREDICTED: cadherin-18-like [Oryzias latipes]
          Length = 796

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 20/184 (10%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIP-----PIQ 60
           ++LDR+      +     A ++    A  P S   + + DINDNAP+ P  P     P  
Sbjct: 115 KSLDRE--RKAHYVLHAQALDRNTEEALEPKSEFIIKVQDINDNAPKFPDGPFEATVPEM 172

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--- 117
            + G +  Q+   ++ D   G +A+I YSI      G   F +DP++G+I T    +   
Sbjct: 173 SEVGTSVLQVTATDSDDPTYGNSAKIVYSILQ----GQPYFSVDPKTGIIRTALPNMDRE 228

Query: 118 AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
           A E Y++ +QA D     GG S  T + +++    N   P F Q  Y V V E A + + 
Sbjct: 229 AREHYTVVIQAKDMAGQVGGLSGSTTINITLT-DVNDNPPKFPQKNYQVLVLESAEVGTP 287

Query: 174 VATI 177
           V  +
Sbjct: 288 VGKL 291



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 29/192 (15%)

Query: 8   NLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPM--IPPIQI 61
           N+DR+     +  + V+  A++  G    +  S T+N  L D+NDN P+ P      + +
Sbjct: 224 NMDRE----AREHYTVVIQAKDMAGQVGGLSGSTTINITLTDVNDNPPKFPQKNYQVLVL 279

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLI 117
           ++ E    + K++A D+DLG NA+I Y+I  +++ G + F I    D + G++     L 
Sbjct: 280 ESAEVGTPVGKLKANDDDLGTNADIKYTI--INSEGANMFSIATNRDTKEGIVSLKKPLN 337

Query: 118 AGEQ--YSITVQATDT---------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              +  Y++ ++  +T         G       +++SV  G    +PVF  + Y ++V E
Sbjct: 338 YERKKTYTLHIEGLNTHADPRFTYLGPFKDTATLKISV--GDVDEAPVFSMDYYILDVYE 395

Query: 167 GASINSTVATIT 178
            +   + V T+T
Sbjct: 396 NSPSGTEVGTVT 407


>gi|432843796|ref|XP_004065669.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
          Length = 1575

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 11/144 (7%)

Query: 41  VNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V++ DINDN+P        ++  +  E    I  + ATD D G N EI YS+      G 
Sbjct: 647 VSVTDINDNSPVFASESVTEVVPEDAEVPSNITVVAATDKDSGFNKEIRYSL----RGGE 702

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV 154
            +F IDP SG++   G+L      +Y++ V A D G   KS+ T + V  V   N   P 
Sbjct: 703 GRFSIDPLSGMVSLIGELDRETKAEYTVLVLAEDQGRPVKSATTALTVQ-VSDVNDNIPK 761

Query: 155 FQQNTYDVNVSEGASINSTVATIT 178
           F Q+ Y V V E  ++ ST+ T++
Sbjct: 762 FSQDAYQVEVLETEAVESTLLTLS 785



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 12/146 (8%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG 64
            K+N+  D     K+  +V+A ++     S    L V + D NDN P+ P IP P++I+ G
Sbjct: 926  KKNVTLDRETKDKYNLEVVAVDQPTEGLSATAQLEVTVLDYNDNTPQFPSIPDPLEIREG 985

Query: 65   ----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
                EA  +I+ I  TD DLG N E+T S   V+   L +FR D   G++     L    
Sbjct: 986  SYTPEAPGEILAIVPTDADLGSNGEVTLSF--VTPHPLFRFRED---GMLLAVAPLDRET 1040

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV 144
             + Y + ++A+D G    + I  ++V
Sbjct: 1041 TDTYELFIKASDNGSPQRENITSITV 1066



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 24/178 (13%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIPPIQIQAG 64
           LDR+     ++   V+A ++     S   +LTV ++D+NDN P+       +  ++ +A 
Sbjct: 720 LDRE--TKAEYTVLVLAEDQGRPVKSATTALTVQVSDVNDNIPKFSQDAYQVEVLETEAV 777

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGE--Q 121
           E+   ++ + A D D  +NA ++YSI+  S  +    F +D  SGV+     L   E  +
Sbjct: 778 ES--TLLTLSAEDPDEELNARVSYSIFQQSPVSDPAAFALDASSGVLRLVQPLDYSEVKE 835

Query: 122 YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASI 170
           Y++ +QA+D G     G ++  +V   V   P    P F Q  Y+V++SE    GASI
Sbjct: 836 YTLKIQASDGGSPSLVGNATVVVVVKDVNNNP----PEFNQELYEVSISENLASGASI 889



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 73  IEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA--- 128
           I+A D D+G+N  +TYSI  VS N  +  F IDP +GV+ + G     E+ S ++ +   
Sbjct: 264 IKAQDGDMGINMTVTYSISTVSPNAYVTNFNIDPNTGVL-SVGTAFDREEMSSSIVSVSI 322

Query: 129 ----TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
               TD   K++  +V V+ V   N  +P F  N YD+   E + +++ V    V+ L  
Sbjct: 323 KAAQTDDRLKTADAVVSVT-VQDINDNAPTFDTNNYDITFLENSPVDAVVFKAIVTDLDE 381

Query: 185 G 185
           G
Sbjct: 382 G 382



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA------RRQIVKIE 74
           FQ+ A E           +TV L D NDN+P         +  GE         ++V++E
Sbjct: 423 FQIEATETDVPNHVTTAQVTVTLTDENDNSPTFSS----SMYEGEVTADQVVDMELVQVE 478

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-----QYSITVQAT 129
           A D D  +N +I YSI   ++ G   F +D  +G I T  K I  +     ++ + + AT
Sbjct: 479 ANDPDADINGQIKYSIEFGNSEGY--FSMDEDTGAI-TLAKTIPLQENKILEFPLYITAT 535

Query: 130 DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           D G     +  +V ++  P   +P F Q  +
Sbjct: 536 DRGIVPRTSAAQV-LIRAPGNSNPQFLQRVF 565



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI---QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+TV L D+NDN P   +   +     +  E    ++K+ ATD D G N+ ITYS    S
Sbjct: 1063 SITVRLLDVNDNKPEFSLSSYVSSLLLKDAEEGTVVLKLSATDPDSGNNSMITYSFSKGS 1122

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQYSI---TVQATDTGGK--SSQTIVEVSVVPGPN 149
            +  L    ++  SG +  T ++ A  + ++   T  ATD G    +S   VE+ +     
Sbjct: 1123 SKYLA---LNGESGEVTLTSEVSALTEDTVVELTAMATDHGEPPLNSTAAVEIHLRIASI 1179

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
            T +  F +++Y+ ++SE     + V  ++ S   SG  + N
Sbjct: 1180 TDNVAFLKSSYNFSLSENQPEGTAVGQVSAS---SGSNLYN 1217


>gi|351710657|gb|EHB13576.1| Protocadherin-11 X-linked [Heterocephalus glaber]
          Length = 985

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 69/148 (46%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDNAP     P I +   E      Q+ KI ATD D G NAEI+Y +     
Sbjct: 419 LLIKVKDENDNAPIFTQ-PFISLSVPENNSPGTQLTKISATDTDSGHNAEISYLL---GM 474

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 475 DAPSEFNLDRRTGILTVVKKLDREKQEKYYFTVLAKDNGMPPLMTNATVFVTVLDQNDNS 534

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 535 PIFTHNEYNFYVPENLPRHGTVGLITVT 562



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 591 VIRPNISFDREKQESYTFYVKAEDGGRVSHSSTAKVTINVVDVNDNKPGF-VVPPSNHSY 649

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + K+ A DND G+N+E+ YSI   +  GL  F ID  +G I    + +
Sbjct: 650 ELVLPSTNPGTVVFKVVAIDNDTGMNSELRYSIVGGNTKGL--FVIDQTTGNITLKERCV 707

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+  D G   S
Sbjct: 708 VADLGLHRLVVKVKDLGQPDS 728



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V+++D NDN P       I++
Sbjct: 168 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVSDTNDNHPVFKE-QEIEV 223

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA+I +   + +SN     F ++  +G+I     L 
Sbjct: 224 SIPENAPVGTSVTQLHATDADIGENAKIHFYFSNLISNMAKRLFHLNTTTGLITIKEPLD 283

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++  V V++      VP  + R  +   N   V +SE A 
Sbjct: 284 REEAPSHKLLVLASDGGSMPAKATVLVNITDVNDNVPSIDIRYIINPTNG-TVVLSENAP 342

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 343 LNTKIALITVT 353



 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 18/146 (12%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
           + LDR+     K+ F V+A++          ++ V + D NDN+P          +P   
Sbjct: 493 KKLDRE--KQEKYYFTVLAKDNGMPPLMTNATVFVTVLDQNDNSPIFTHNEYNFYVPENL 550

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            + G     +  I  TD D G N+ +T SI  VS+    +F IDP++GVI         +
Sbjct: 551 PRHG----TVGLITVTDPDYGENSAVTLSISDVSD----EFTIDPQTGVIRPNISFDREK 602

Query: 121 Q--YSITVQATDTGGKSSQTIVEVSV 144
           Q  Y+  V+A D G  S  +  +V++
Sbjct: 603 QESYTFYVKAEDGGRVSHSSTAKVTI 628



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 29/201 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  KE LDR+       +  V+A +  G +     ++ VN+ D+NDN P +    +I P
Sbjct: 275 LITIKEPLDRE--EAPSHKLLVLASD--GGSMPAKATVLVNITDVNDNVPSIDIRYIINP 330

Query: 59  -----IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
                +  +      +I  I  TD D   N  +T    H        FR+ P      ++
Sbjct: 331 TNGTVVLSENAPLNTKIALITVTDKDAEHNGRVTCFTDHEV-----PFRLRPVFSNQFLL 385

Query: 111 ETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           ET   L   +  +Y+I + A D G     +SS  +++V      N  +P+F Q    ++V
Sbjct: 386 ETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVK---DENDNAPIFTQPFISLSV 442

Query: 165 SEGASINSTVATITVSRLASG 185
            E  S  + +  I+ +   SG
Sbjct: 443 PENNSPGTQLTKISATDTDSG 463


>gi|301788426|ref|XP_002929629.1| PREDICTED: protocadherin-11 X-linked-like, partial [Ailuropoda
           melanoleuca]
          Length = 1044

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 71/150 (47%), Gaps = 14/150 (9%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      ++ KI ATD+D G NAEI Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSLPENNSPGTKLTKISATDSDSGHNAEINYLL------ 505

Query: 97  GLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           G+    +F +D  +G++    KL     E+YS TV A D G  S  T   V V +   N 
Sbjct: 506 GIDAPSEFNLDHHTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLMTNATVLVTILDQND 565

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
            SP+F  N Y+  V E    + TV  ITV+
Sbjct: 566 NSPIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 23/174 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYSFTVLAKDNGMPSLMTNATVLVTILDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI+ V++     F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIFDVND----DFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF----QQNTYDV 162
               +Q  Y+  V+A D G  S  +  +V++ V   N   P+F      N+Y++
Sbjct: 631 FDREKQESYTFYVKAEDGGKVSHSSTAKVTINVVDVNDNKPLFIAPSSNNSYEL 684



 Score = 42.7 bits (99), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P    I P     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGKVSHSSTAKVTINVVDVNDNKPLF--IAPSSNNS 681

Query: 59  --IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             + + +      +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K 
Sbjct: 682 YELVLPSTNPGTVVFTVLAVDNDTGMNAELRYSIVEGNTKGL--FIIDQTTGNITLKEKC 739

Query: 117 IAGE--QYSITVQATDTGGKSS 136
           +  +   + + V+  D G   S
Sbjct: 740 VVTDLGLHRLIVKVKDLGQPES 761



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK----GQST 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I+++SV 
Sbjct: 185 FGLD----VIETPEGDKMPQLIVQKELDREEKDTYIMKVKVEDGGFPQRSSTAILQISVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  SPVF+++  +VN+ E + + ++V  +
Sbjct: 241 -DTNDNSPVFKEDGIEVNLPENSPVGTSVTQL 271



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  K+ LDR+  PN    +  V+A +  G        + VN+ DINDNAP +    +I 
Sbjct: 308 LITIKQPLDREESPN---HKLLVLASD--GGLIPARAMVLVNITDINDNAPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  +  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPLNTKIALVTVTDKDADNNGMVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           + E  S  + +  I+ +   SG
Sbjct: 475 LPENNSPGTKLTKISATDSDSG 496



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 29/197 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           L+V KE LDR+  +   +  +V   +      S    L +++ D NDN+P          
Sbjct: 201 LIVQKE-LDREEKD--TYIMKVKVEDGGFPQRSSTAILQISVADTNDNSPVFKEDGIEVN 257

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIE 111
           LP   P+          + ++ ATD D+G NA+I +   + +SN     F ++  +G+I 
Sbjct: 258 LPENSPVG-------TSVTQLHATDADIGENAKIHFYFSNLISNIAKRLFHLNTTTGLIT 310

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVN 163
               L   E   + + V A+D G   ++ +V V++       P  + R  +   N   V 
Sbjct: 311 IKQPLDREESPNHKLLVLASDGGLIPARAMVLVNITDINDNAPSIDIRYIINPING-TVV 369

Query: 164 VSEGASINSTVATITVS 180
           +SE A +N+ +A +TV+
Sbjct: 370 LSENAPLNTKIALVTVT 386


>gi|281337635|gb|EFB13219.1| hypothetical protein PANDA_019861 [Ailuropoda melanoleuca]
          Length = 1017

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 71/150 (47%), Gaps = 14/150 (9%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      ++ KI ATD+D G NAEI Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPFISLSLPENNSPGTKLTKISATDSDSGHNAEINYLL------ 505

Query: 97  GLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
           G+    +F +D  +G++    KL     E+YS TV A D G  S  T   V V +   N 
Sbjct: 506 GIDAPSEFNLDHHTGILTAVKKLDREKQEKYSFTVLAKDNGMPSLMTNATVLVTILDQND 565

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
            SP+F  N Y+  V E    + TV  ITV+
Sbjct: 566 NSPIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 23/174 (13%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++    +     ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDREKQE--KYSFTVLAKDNGMPSLMTNATVLVTILDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI+ V++     F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIFDVND----DFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF----QQNTYDV 162
               +Q  Y+  V+A D G  S  +  +V++ V   N   P+F      N+Y++
Sbjct: 631 FDREKQESYTFYVKAEDGGKVSHSSTAKVTINVVDVNDNKPLFIAPSSNNSYEL 684



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P    I P     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGKVSHSSTAKVTINVVDVNDNKPLF--IAPSSNNS 681

Query: 59  --IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             + + +      +  + A DND G+NAE+ YSI   +  GL  F ID  +G I    K 
Sbjct: 682 YELVLPSTNPGTVVFTVLAVDNDTGMNAELRYSIVEGNTKGL--FIIDQTTGNITLKEKC 739

Query: 117 IAGE--QYSITVQATDTGGKSS 136
           +  +   + + V+  D G   S
Sbjct: 740 VVTDLGLHRLIVKVKDLGQPES 761



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK----GQST 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I+++SV 
Sbjct: 185 FGLD----VIETPEGDKMPQLIVQKELDREEKDTYIMKVKVEDGGFPQRSSTAILQISVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  SPVF+++  +VN+ E + + ++V  +
Sbjct: 241 -DTNDNSPVFKEDGIEVNLPENSPVGTSVTQL 271



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 2   LVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  K+ LDR+  PN    +  V+A +  G        + VN+ DINDNAP +    +I 
Sbjct: 308 LITIKQPLDREESPN---HKLLVLASD--GGLIPARAMVLVNITDINDNAPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  +  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPLNTKIALVTVTDKDADNNGMVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVN 163
           +ET   L   +  +Y+I + A D G     +SS  +V+V      N  +PVF Q    ++
Sbjct: 418 LETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVK---DENDNAPVFTQPFISLS 474

Query: 164 VSEGASINSTVATITVSRLASG 185
           + E  S  + +  I+ +   SG
Sbjct: 475 LPENNSPGTKLTKISATDSDSG 496



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 29/197 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           L+V KE LDR+  +   +  +V   +      S    L +++ D NDN+P          
Sbjct: 201 LIVQKE-LDREEKD--TYIMKVKVEDGGFPQRSSTAILQISVADTNDNSPVFKEDGIEVN 257

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIE 111
           LP   P+          + ++ ATD D+G NA+I +   + +SN     F ++  +G+I 
Sbjct: 258 LPENSPVG-------TSVTQLHATDADIGENAKIHFYFSNLISNIAKRLFHLNTTTGLIT 310

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVN 163
               L   E   + + V A+D G   ++ +V V++       P  + R  +   N   V 
Sbjct: 311 IKQPLDREESPNHKLLVLASDGGLIPARAMVLVNITDINDNAPSIDIRYIINPING-TVV 369

Query: 164 VSEGASINSTVATITVS 180
           +SE A +N+ +A +TV+
Sbjct: 370 LSENAPLNTKIALVTVT 386


>gi|156347842|ref|XP_001621773.1| hypothetical protein NEMVEDRAFT_v1g221587 [Nematostella vectensis]
 gi|156208027|gb|EDO29673.1| predicted protein [Nematostella vectensis]
          Length = 1012

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
           V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 464 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGSNSALTYSIAAG 522

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
           +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 523 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 580

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             PV Q     V++SE A+I++ VAT+  S
Sbjct: 581 NPPVIQDAVIQVSLSETAAIDTPVATVIAS 610



 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHV 93
           V +TVN+ DIND  P L   P   +   E  R     + + ATD D G N+ +TYSI   
Sbjct: 767 VKVTVNVLDINDETP-LFQSPSFNVSVNEIERLGTVFLTVSATDGDAGSNSALTYSIAAG 825

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPG-PNT 150
           +  G   F I+ ++G I    +L     +QY++TV A D G     +   V++  G  N 
Sbjct: 826 NEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDAND 883

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVS 180
             PV Q     V++SE A+I++ VAT+  S
Sbjct: 884 NPPVIQDAVIQVSLSETAAIDTPVATVIAS 913



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 5/111 (4%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
           + ATD D G N+ +TYSI   +  G   F I+ ++G I    +L     +QY++TV A D
Sbjct: 96  VSATDGDAGANSALTYSIAAGNEEGF--FSINNKTGAISVAKQLDRETRDQYTLTVMAQD 153

Query: 131 TGGKSSQTIVEVSVVPG-PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G     +   V++  G  N   PV Q     V++SE A+I++ VAT+  S
Sbjct: 154 GGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAAIDTPVATVIAS 204



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 27/187 (14%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           + LDR+  +  ++   V+A++      +   ++ + + D NDN P +     IQ+   E 
Sbjct: 135 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVI-QDAVIQVSLSET 191

Query: 67  RR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ 121
                 +  + A+D D+G N  + YSI +    G H  F+I D  SG I   G L   ++
Sbjct: 192 AAIDTPVATVIASDKDIGANGRLMYSIEN----GAHGHFQIKDSSSGAISLAGMLSYNQR 247

Query: 122 --YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG----ASINST 173
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG    A+I++ 
Sbjct: 248 NNYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEGEANTAAIDTP 300

Query: 174 VATITVS 180
           VAT+  S
Sbjct: 301 VATVIAS 307



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           + LDR+  +  ++   V+A++      +   ++ + + D NDN P +     IQ+   E 
Sbjct: 541 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVI-QDAVIQVSLSET 597

Query: 67  RR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++
Sbjct: 598 AAIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQR 653

Query: 122 --YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 654 NNYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 696



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           + LDR+  +  ++   V+A++      +   ++ + + D NDN P +     IQ+   E 
Sbjct: 844 KQLDRETRD--QYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVI-QDAVIQVSLSET 900

Query: 67  RR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ 121
                 +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++
Sbjct: 901 AAIDTPVATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQR 956

Query: 122 --YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
             Y + V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 957 NNYIVVVNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 999



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 17/104 (16%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRI-DPRSGVIETTGKLIAGEQ--YSIT 125
           +  + A+D D+G N  + YSI     +G H  F+I D  SG I   G L   ++  Y + 
Sbjct: 301 VATVIASDKDIGANGRLMYSI----ESGAHGHFQIKDSSSGAISLAGMLSYNQRNNYIVV 356

Query: 126 VQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           V  TD G  +  S+ +V + V P P       +  TYDV+V EG
Sbjct: 357 VNVTDGGSPALKSRAMVVIDVTPKP-------RNLTYDVSVLEG 393


>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
          Length = 5019

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            F   VIA + QG    +    TV   + DINDNAP+    +      +      Q++++ 
Sbjct: 1209 FSLTVIATD-QGLPKPLKDQATVQIYMKDINDNAPKFLKDLYQATISELAANLTQVLRVS 1267

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G N  I YS+  +      +F ID  +G +   GKL   A   YS+ +QA D+G
Sbjct: 1268 ASDVDEGTNGLIHYSV--IKGNEEKQFAIDSSTGQVTLVGKLDHEATASYSLVIQAVDSG 1325

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S  +   +S+ V   N  SP F ++T  V+V E   +   V+++T +   SG
Sbjct: 1326 AVSLSSTCTLSIDVLDENDNSPSFPKSTLSVDVLENMRVGELVSSVTATDSDSG 1379



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 18/152 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP----PI--QIQAGEARRQIVKIEATDN-DLGVNAEITYSI 90
            ++T+N+ D NDNAP L + P    P+   ++AG     ++K+ A D+ D G+N+E+ Y +
Sbjct: 3002 TVTINIVDSNDNAP-LFLAPKYFTPVTKNVRAGT---NLIKVTAVDDKDFGLNSEVEYFV 3057

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVP 146
               S T  +KFR+D  +G I  +  L+A   +++   V+A D G    SS+  VE+ VV 
Sbjct: 3058 SDESKT--NKFRLDRSTGWISVSSSLMADLNKKFLFKVKAKDKGNPPLSSEVAVEI-VVT 3114

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              N  +P F Q+   V + E  S+ + + T++
Sbjct: 3115 EENYHTPEFSQSHMSVTIPESHSVGAVIRTVS 3146



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 18/183 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAG 64
           LDR+      F  QV+A +      S    + V+L D+NDN+   P+  P+Q    IQ  
Sbjct: 681 LDRE--EQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNS---PVFYPVQYFAHIQEN 735

Query: 65  E-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
           E A   +  + ATD D+G N  + YSI   S     +F++  ++G+I T   L   E+  
Sbjct: 736 EPAGTYVTTVSATDPDMGPNGTVKYSI---SAGDTSRFQVHGKTGIITTKIALDREEKTA 792

Query: 122 YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V T+  
Sbjct: 793 YQLQIVATDGGHLQSQNQAIVTITVLDTQD-NPPVFSQGMYGFVVFENVALGYHVGTVFA 851

Query: 180 SRL 182
           S +
Sbjct: 852 STM 854



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1830 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHIPKFSKPVYSFDI 1884

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D G+N EITY++      G+  F ++P +GV   T  L   A
Sbjct: 1885 PEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGM--FFLNPVTGVFNLTRALDYEA 1942

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +T++A D GG+ +   V  +++   N   PVF   +Y  ++ E  +  S +   +
Sbjct: 1943 QQYYILTIRAEDGGGQFATIRVYFNIL-DINDNPPVFSMTSYSTSLMENLAPGSAILNFS 2001

Query: 179  VSRLASG 185
            V+    G
Sbjct: 2002 VTDADDG 2008



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV-- 93
           L V + DINDN PR       Q+   E   +  +++ + A D DLG N  I +S+     
Sbjct: 591 LVVTILDINDNKPRFSQPEGYQVSLAENSPSGTELLVLSAVDGDLGDNGTIRFSLQEAEP 650

Query: 94  --------SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVS 143
                   S T    FR+DP SG + T  +L   EQ  +S+ V ATD G     ++  V+
Sbjct: 651 AVVAVGPSSVTPRQVFRLDPVSGKLSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVN 710

Query: 144 V-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           V +   N  SPVF    Y  ++ E     + V T++ +
Sbjct: 711 VSLLDVNDNSPVFYPVQYFAHIQENEPAGTYVTTVSAT 748



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1762 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGADDS 1820

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             H   +DP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N   P F
Sbjct: 1821 FH---VDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHIPKF 1875

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E A+  S VA I  +   SG
Sbjct: 1876 SKPVYSFDIPEDATPGSLVAAILATDDDSG 1905



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 10/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             S+T+N+ D+NDN+P        P + ++   +   ++++ A+D D G NA I Y+I   
Sbjct: 3212 CSVTINVIDVNDNSPTFSPEDYFPNV-LENAPSGTTVIRLNASDADSGPNAVIAYAI-QS 3269

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S++ L  F IDP +G I T G L     + Y +T++A +   +   +   V++ + G N 
Sbjct: 3270 SDSDL--FVIDPNTGTITTQGFLDYETKQSYHLTIKAFNVPDEERCSFASVNIQLEGTNE 3327

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P F    Y   VSE AS  + V  +  S
Sbjct: 3328 YVPRFVSKLYYFEVSEAASEGTIVGEVFAS 3357



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 13/165 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+  +   +   V+A +K   + S    + V + DINDN P     +  ++++     
Sbjct: 2146 LDREAVS--NYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYRVELEENTLT 2203

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               ++++ ATD D G N ++ YSI  VS    ++FRID  +GVI T  K +  E+   Y 
Sbjct: 2204 GTDLIQVLATDGDEGTNGQVRYSI--VSGDTGNQFRIDSVTGVI-TVAKPLDREKKPSYM 2260

Query: 124  ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            ++VQ++D G   ++  T V + V+   N   P F+ + Y+VNV E
Sbjct: 2261 LSVQSSDRGSSPRTDTTTVNI-VLKDVNDYVPTFELSPYNVNVPE 2304



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L V + D+NDNAP     P I +I    + R+++ + A 
Sbjct: 2668 KYVVWIEARDTGFPPFSSYKKLEVTVVDVNDNAPEFEQDPFIAEIVENLSPRKLLTVAAV 2727

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G+N ++ Y I  +     + F I+  +G I +   L   +  +Y++T++A+D G  
Sbjct: 2728 DRDSGLNGQLIYEI--IEGNTENSFSINRATGEIRSVRPLDREKLSRYTLTIKASDKGTP 2785

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               T V+V + V   N  +P F Q  +  +V E A +  TV  +T S
Sbjct: 2786 LQSTTVKVIINVLDENDNAPRFSQ-IFSASVPENAPLGFTVTRVTTS 2831



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIE 74
            ++ +V+A    G A +    + + + D+NDN+P    I  ++    ++  +A   I + +
Sbjct: 896  YQLKVVA---SGGAVTGDTIVNITVKDLNDNSPHF--IHAVESVNVVENWKAGHTIFQAK 950

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG- 132
            A D D GVN  + YS+   +  GL  F I+ ++G I   G+L I    Y + + A+D G 
Sbjct: 951  ALDPDEGVNGMVLYSLKQ-NPKGL--FSINEQTGAISLIGQLDINAGTYQVEILASDMGV 1007

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + S T V    V   N   PVF Q +Y++ + E   +NS    +  +   SG
Sbjct: 1008 PQLSSTFVLTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVHATDKDSG 1060



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 31/200 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
           +VS+  LDR+     +   QV  + +      + V++TV   DINDN P         R+
Sbjct: 187 LVSQGGLDREATPSYQLLVQVEDKGEPRRRGYLQVNVTVQ--DINDNPPVFSQTLYQARV 244

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSG 108
           P   P+          ++++ A D D G NA+I Y +      G        F +DP SG
Sbjct: 245 PEDAPVGAS-------VLQVAAADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESG 297

Query: 109 VIETTGKLI--AGEQYSITVQATDTG-----GKSSQTIVEVSVVPG-PNTRSPVFQQNTY 160
           VI    +L     +QYS+TVQATD G     G++   I  + V    P  +   F   + 
Sbjct: 298 VIRIRERLDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSR 357

Query: 161 DVNVSEGASINSTVATITVS 180
             +V E A+  + VA +TVS
Sbjct: 358 FASVDENAAPGTVVALLTVS 377



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 6/167 (3%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
            N G ++ +++A +      S    LTV+++D+NDN P    +   I I   E    +  K
Sbjct: 992  NAGTYQVEILASDMGVPQLSSTFVLTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK 1051

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDT 131
            + ATD D GVN EI YSI    N G   F I P   + I++       E+Y + V A+D 
Sbjct: 1052 VHATDKDSGVNGEIAYSIIE-GNAG-DAFGIFPDGQLYIKSELDRELQERYILLVVASDR 1109

Query: 132  GGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V ++V+    N   P+F    Y     E  S  S V  I
Sbjct: 1110 AVEPLNATVNITVILEDVNDNRPLFNSTNYVFYFEEEQSGGSYVGKI 1156



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 10/137 (7%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            S+ + L   N+  PR    +   ++    +   IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3317 SVNIQLEGTNEYVPRFVSKLYYFEVSEAASEGTIVGEVFASDRDLGTDGEVHYLIF--GN 3374

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+ID RSG I  +G L     E+ S+ V A + G      I EV+V   +   N 
Sbjct: 3375 SRKKGFQIDERSGQIYVSGPLDREKEERISLKVLAKNFGSIRGADIDEVTVNITILDAND 3434

Query: 151  RSPVFQQNTYDVNVSEG 167
              PVF   TY++ +SEG
Sbjct: 3435 -PPVFTLGTYNIQISEG 3450



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 24/195 (12%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI----QI 61
            K  LDR+     ++   V+A ++     +  V++TV L D+NDN P       +    + 
Sbjct: 1089 KSELDRELQE--RYILLVVASDRAVEPLNATVNITVILEDVNDNRPLFNSTNYVFYFEEE 1146

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---- 117
            Q+G +   + KI A D D G N E+ YS  H+       F ++  +G I +T +      
Sbjct: 1147 QSGGS--YVGKINAVDKDFGPNGEVRYSFEHMQ----PDFELNTITGEIRSTHQFDREAL 1200

Query: 118  ----AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
                    +S+TV ATD G       Q  V++  +   N  +P F ++ Y   +SE A+ 
Sbjct: 1201 MRQRGAAVFSLTVIATDQGLPKPLKDQATVQI-YMKDINDNAPKFLKDLYQATISELAAN 1259

Query: 171  NSTVATITVSRLASG 185
             + V  ++ S +  G
Sbjct: 1260 LTQVLRVSASDVDEG 1274



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + A +K     S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2765 LDRE--KLSRYTLTIKASDKGTPLQSTTVKVIINVLDENDNAPRFSQIFSASVPENAPLG 2822

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
              + ++  +D D+G+NA    S Y + +T L  F I+P +G I T  +L+  E   +Y I
Sbjct: 2823 FTVTRVTTSDEDIGMNA---ISRYSIRDTSL-PFVINPSTGDI-TVSRLLNREDTDRYRI 2877

Query: 125  TVQATDTGGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V A D+G   S+   V V+ V   N  +P F + +Y +   E   I   V  ++ +
Sbjct: 2878 RVSAHDSGWTVSTDVTVFVTDV---NDNAPRFTKPSYYLECPELPGIGLKVTQVSAT 2931



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEAT 76
            ++  + A+++     S  +S+ + + D NDN P  P   I    I+       ++ + A 
Sbjct: 1420 YKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIPVGSSVISVTAN 1479

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D+D  +N ++TY+I   +  G H FRID   G I T  ++       + +TV+ATD
Sbjct: 1480 DSDADINGQLTYAIIQQTPRGNH-FRIDEVRGTIFTNAEIDREFANLFELTVKATD 1534



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +   + A +    + S   +L++++ D NDN+P  P    + +   E  R    +  + A
Sbjct: 1315 YSLVIQAVDSGAVSLSSTCTLSIDVLDENDNSPSFPK-STLSVDVLENMRVGELVSSVTA 1373

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD+D G NA++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G 
Sbjct: 1374 TDSDSGDNADLHYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGR 1431

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               S T+  V  V   N   P F       ++ E   + S+V ++T
Sbjct: 1432 PPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIPVGSSVISVT 1477



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+ND+     +P+L  IP   PI          + K +ATD D G N+ I YS+
Sbjct: 2071 VSIILLDVNDSPPSFISPKLTYIPENTPIDTI-------VFKAQATDPDSGPNSYIEYSL 2123

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
                    +KF I    G +   G+L   A   Y++TV ATD G  S  +  +V V V  
Sbjct: 2124 LRPLG---NKFSIGTIDGEVRLIGELDREAVSNYTLTVVATDKGQPSLSSSTDVVVIVLD 2180

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P+F Q  Y V + E
Sbjct: 2181 INDNNPLFAQKLYRVELEE 2199



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS------LTVNLNDINDNAPRLPM- 55
           V   +N    PP PG   F   +    G AA+ PVS      L + +NDIND+ P     
Sbjct: 432 VAVADNYGASPPPPG---FPTSSLSPDGVAAT-PVSRSSVASLVIFVNDINDHPPVFEQS 487

Query: 56  IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           +  + I         V+ + ATD D G+NA + YSI  VS   L  F I   SG++ T G
Sbjct: 488 VYRVNISEEVPLGSYVRGLTATDRDSGLNANLRYSI--VSGNELGWFHISEHSGLVTTAG 545



 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 15/161 (9%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEI 86
            A S   S+ V + D+NDN P+    P     P    +G     +  +  TD D G NAE+
Sbjct: 2479 ALSSSTSVLVAVADVNDNPPKFQHHPYVTHVPSPTTSGSF---VFAVTVTDADAGSNAEL 2535

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSV 144
             YS+         KF ID   G I    +L    + +I+V   D G   K+  T V V  
Sbjct: 2536 HYSLM---GKNAEKFHIDSARGAILAANELSGESEVTISVHVRDGGRYPKTDSTTVTVRF 2592

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V       P  Q         E  ++ + V TI+ S    G
Sbjct: 2593 V--NRAEFPQVQAEQETFTFPENQAVGTLVTTISGSSARGG 2631



 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 16/149 (10%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D NDN P       L   P + I +      +  I A D D G N E+ Y I  
Sbjct: 1549 VTILVMDQNDNVPVFISQNALAADPSVMIGS-----ILTTIIAADPDEGANGEVEYEII- 1602

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++      
Sbjct: 1603 --NGDTKTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTEMTIIL-QGVD 1659

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P+F Q  Y   + EG  I + V +I  S
Sbjct: 1660 GPIFTQPKYITILKEGEPIGTNVISIEAS 1688



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 17/167 (10%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD D G N  + +S 
Sbjct: 101 TYPSEVRVLVLDLNDNAPVFPD-PSIVVTFKEDTGSGRQLILDTATDADSGTNG-VDHSS 158

Query: 91  YH-VSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQTI 139
           Y  VS     +FR++     SG      + + G L   A   Y + VQ  D G    +  
Sbjct: 159 YRIVSGNEEGRFRLNITLNPSGEGAFLHLVSQGGLDREATPSYQLLVQVEDKGEPRRRGY 218

Query: 140 VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ++V+V V   N   PVF Q  Y   V E A + ++V  +  +    G
Sbjct: 219 LQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVLQVAAADADEG 265


>gi|313220610|emb|CBY31457.1| unnamed protein product [Oikopleura dioica]
          Length = 2507

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 16/181 (8%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           + LDR+  +   ++FQV A +  G   S  V + VNL D+ND+ P+        ++  E 
Sbjct: 426 KKLDRELID--HYKFQVKATD--GGGLSDIVDIVVNLIDVNDSPPKFSQ-SSYSVKVAED 480

Query: 67  RR--QIV-KIEATDNDLGVNAEITYSIYH--VSNTGLHK-FRIDPRSGVIETTGKLIAGE 120
            R  QI+ KI ATD+D G NA ++Y+I    ++   ++K F+++  +GVI     L   +
Sbjct: 481 SRPGQIIGKIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKLNEETGVISLAENLDNEQ 540

Query: 121 Q--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           +  YS  + A D G   KS +  VE++V+   N   PVF++    V ++E +++NS + T
Sbjct: 541 KKYYSFEIIAKDHGIPQKSDRAKVEINVM-DVNDNPPVFEKREIKVTIAEDSAVNSIITT 599

Query: 177 I 177
           +
Sbjct: 600 V 600



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 14/185 (7%)

Query: 12  DPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARR 68
           DP    K  ++F+V A   + + AS    L +++ND+NDN P         ++      R
Sbjct: 110 DPEGKTKTQYKFKVTASNTKTSEASF-CWLLIHVNDVNDNEPVFGQTEYKFEVHESTPVR 168

Query: 69  QIV-KIEATDNDLGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKL----IAGE 120
            IV  ++ TD DL   A +  S+      S      F ID ++G I T  KL    IA  
Sbjct: 169 TIVGSVDVTDKDLMDQANLRLSLIEQGTKSRKSPTDFTID-KNGRIMTHRKLDREQIASY 227

Query: 121 QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ +  + + +    SQ  VEVS++   N   PVF ++  +V++SEG  I + V ++  +
Sbjct: 228 KFYVIAKDSQSPIHQSQAKVEVSILDD-NDSPPVFAKDELEVHLSEGTKIGTKVISVKAT 286

Query: 181 RLASG 185
               G
Sbjct: 287 DADEG 291



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +++   LDR+      ++F VIA++ Q         + V++ D ND+ P       +++ 
Sbjct: 213 IMTHRKLDRE--QIASYKFYVIAKDSQSPIHQSQAKVEVSILDDNDSPPVFAK-DELEVH 269

Query: 63  AGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E  +   +++ ++ATD D G N ++TY++ +  +T    F +D  SG I     L   
Sbjct: 270 LSEGTKIGTKVISVKATDADEGENGKVTYALMNDKDT----FAVDATSGDISLIRDLDFE 325

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTV 174
              ++ + V+A D G +  ++IV V+VV    N  +P F  N     V E A I  TV
Sbjct: 326 VNRKFELRVRAQDHGRRRQESIVTVTVVIVDLNDNAPHFNINPLVARVKEDAKIGHTV 383



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 10/174 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIE 74
           KF  +V A++         V++TV + D+NDNAP     P++  ++  A         I 
Sbjct: 329 KFELRVRAQDHGRRRQESIVTVTVVIVDLNDNAPHFNINPLVARVKEDAKIGHTVTFAIA 388

Query: 75  ATDNDLGV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDT 131
           +  +D    N  ++Y++    +  L  F ID  +G I    KL     + Y   V+ATD 
Sbjct: 389 SDKDDPNSPNGRLSYTLI---SPNLLPFAIDKNTGRITLVKKLDRELIDHYKFQVKATDG 445

Query: 132 GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           GG S    + V+++   N   P F Q++Y V V+E +     +  I  +   SG
Sbjct: 446 GGLSDIVDIVVNLI-DVNDSPPKFSQSSYSVKVAEDSRPGQIIGKIAATDSDSG 498



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 22/137 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--------- 69
           +  ++ AR+    +     ++ + + D+NDNAP          ++ + R           
Sbjct: 651 YELEIEARDHGTPSLYAKATVMITVLDVNDNAP--------HFESSKKRYYVREDKDPGT 702

Query: 70  -IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            I KIEA D D+G NA + Y +     T  + F +D  +G +E    L   ++  Y+ITV
Sbjct: 703 IIAKIEADDRDIGDNANLEYFLLPNRETN-NMFYLDSATGELELREALDFEKKRNYTITV 761

Query: 127 QA-TDTGGKSSQTIVEV 142
           Q  +D+   +   I+EV
Sbjct: 762 QVFSDSLQTTEDLIIEV 778


>gi|119576776|gb|EAW56372.1| cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
           Drosophila) [Homo sapiens]
          Length = 2924

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 242 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 294

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 295 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 354

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 355 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 414

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 415 PGAPVLRVTAS 425



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 833

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 834 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 890

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 891 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 947



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 562 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYT 617

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 618 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 668

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 669 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 725

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 726 RPAGTTVVLISAT 738



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 732 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 787

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 788 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 846



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 381 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSI 439

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 440 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 496

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 497 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 528



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 873  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 930

Query: 57   ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                 PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 931  VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 981

Query: 113  TGKLIAGE--QYSITVQAT 129
               L   +  +Y + +QAT
Sbjct: 982  LVDLDYEDRPEYVLVIQAT 1000


>gi|13325064|ref|NP_001399.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Homo
           sapiens]
 gi|22095550|sp|Q9HCU4.1|CELR2_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
           AltName: Full=Cadherin family member 10; AltName:
           Full=Epidermal growth factor-like protein 2;
           Short=EGF-like protein 2; AltName: Full=Flamingo homolog
           3; AltName: Full=Multiple epidermal growth factor-like
           domains protein 3; Short=Multiple EGF-like domains
           protein 3; Flags: Precursor
 gi|9828190|gb|AAG00080.1|AF234887_1 FLAMINGO 1 [Homo sapiens]
 gi|21929188|dbj|BAC06168.1| seven transmembrane helix receptor [Homo sapiens]
          Length = 2923

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 241 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 293

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 353

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 354 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 414 PGAPVLRVTAS 424



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 832

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 833 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 889

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 890 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 946



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 561 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYT 616

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 617 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 667

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 668 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 724

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 725 RPAGTTVVLISAT 737



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 731 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 786

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 787 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 845



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 380 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSI 438

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 439 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 495

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 496 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 527



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 872 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 929

Query: 57  ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 930 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 980

Query: 113 TGKLIAGE--QYSITVQAT 129
              L   +  +Y + +QAT
Sbjct: 981 LVDLDYEDRPEYVLVIQAT 999


>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
          Length = 4981

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR---LPMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N  D NDNAP+   +    P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPSLLSETTVTINTVDSNDNAPQFLEMKYFTPVTKNVKVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I   S   L KF++D  +G I     LI+   + + ITV
Sbjct: 3002 LIKVTAVDDKDFGLNSEVEYFI--SSENHLGKFKLDNNTGWISVASSLISDLNQNFLITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  SI +TV T++
Sbjct: 3060 TAKDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSIGATVRTVS 3112



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+    G +   V+A +      S    + V+L D+NDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQGFYSLLVLATDLGSPPQSSIARINVSLLDVNDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGLNGTVRYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I Y  Y +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHY--YVIKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GATSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYIVSEDDEDGI--FFLNPVTGVFNLTRILDYEA 1908

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   +  +++   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTIRIYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ ATD D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVCATDGDEGTNGQVRYGI--VDGDANQEFRIDSVTGAI-TVAKPLDREKTPTYF 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2270



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 8/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLGATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  + +S+   + T    FR+D  SG + T   L   EQ  YS+ V ATD G     
Sbjct: 612 LGDNGTVRFSLQE-AETDQRSFRLDSVSGRLSTISSLDREEQGFYSLLVLATDLGSPPQS 670

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +I  ++V +   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SIARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPRKILTVLAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    H F I+  +G I +   L   +  QY +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNKEHSFSINHATGEIRSIRPLDREKISQYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVIINILDENDNAPRFSQ-IFSAHVLENSPLGYTVTRVTTS 2797



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 17/164 (10%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  +  + + +  +    I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQTGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            D G  + S + +    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 970  DMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 1013



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVLENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA    S Y V +T L  F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDIGINA---ISRYSVMDTSL-PFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ S
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAS 2897



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P  ++   +   ++ + ATD+D G NA I Y+I   S++ L  F IDP +GVI T G L 
Sbjct: 3201 PTVLENAPSGTTVIHLNATDDDSGTNAVIAYTI-QSSDSDL--FVIDPNTGVITTQGFLD 3257

Query: 118  --AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                + Y +TV+A +   +   +   V++ + G N   P F    Y   +SE A   + V
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNIQLRGTNEYVPRFVSKLYYFEISEAAPKGTVV 3317

Query: 175  ATITVS 180
              +  S
Sbjct: 3318 GEVFAS 3323



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 19/147 (12%)

Query: 45   DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+     +G H
Sbjct: 2458 DVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIGPNSELHYSL-----SGRH 2509

Query: 100  --KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
              KF IDP  G I   G L    + + +V   D G   K+  T V V  V   +      
Sbjct: 2510 SEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADFPKVRA 2569

Query: 156  QQNTYDVNVSEGASINSTVATITVSRL 182
            ++ T+     E   + + V TIT S L
Sbjct: 2570 KEQTF--MFPENQPVGTLVTTITGSSL 2594



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 20/193 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   VIA ++     S  V++T+ L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVIASDRAVEPLSATVNVTIILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   AR--RQIVKIEATDNDLGVNAEITYSIYHVS-NTGLHKF-------RIDPRSGVIETTGK 115
             R    + K+ A D D G N E+ YS   V  +  LH         R   R  ++   G 
Sbjct: 1113 QRAGSSVGKVSALDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQRGT 1172

Query: 116  LIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  +
Sbjct: 1173 AV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANLT 1227

Query: 173  TVATITVSRLASG 185
             V  ++ S +  G
Sbjct: 1228 QVLRVSASDVDEG 1240



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGVIETTGKLIAG-------EQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG       +  G        QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVIASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+++    N   P+F    Y     E     S+V  ++
Sbjct: 1077 VEPLSATVNVTIILEDVNDNRPLFNSTNYTFYFEEEQRAGSSVGKVS 1123



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  +V ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNIQLRGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG    + V  ++
Sbjct: 3401 -PPVFSLNIYSVQISEGVPTGTHVTFVS 3427



 Score = 42.7 bits (99), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 9/166 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            +   + A +   T+ +   +L +++ D NDN P  P    + +   E  R    +  + A
Sbjct: 1281 YSLVIQAVDSGATSLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTA 1339

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
            TD+D G NA++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G 
Sbjct: 1340 TDSDSGDNADLHYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGR 1397

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
                + + V + V   N   P F       ++ E   I ++V ++T
Sbjct: 1398 PPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTARDPDADINGQLSYTIVQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
          Length = 5148

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 10/170 (5%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V + D+ND  P        ++   E   A   ++ IEA+D D
Sbjct: 718 ISARDQGVHPKVSYAQLIVTVLDVNDEKPVFSQEAGYEVSVAENAPAGTDLLVIEASDGD 777

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S +  ++T    FR+DP SG + T   L   EQ  YS+ V A D G   ++
Sbjct: 778 LGDNGTVRFS-FQEADTEQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLAVDLGSPPQT 836

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           S T V VS++   N  SPVF    Y  ++ E     S + T++ S   SG
Sbjct: 837 SLTRVNVSLL-DVNDNSPVFYPVQYFAHIQENEPAGSYITTVSASDPDSG 885



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   S+ +N+ D+NDN+P    IP    P  ++   +   ++++
Sbjct: 3327 KHEMTISATDGGWRARTSYCSIIINVLDVNDNSPIF--IPEEYSPTVLENAPSGTTVMRL 3384

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I YS+   S++ L  F IDP SGVI T G L     + Y +TV+A + 
Sbjct: 3385 NATDADSGSNAVIAYSL-QSSDSDL--FVIDPNSGVITTQGFLDYETKQSYHLTVKAFNV 3441

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V++ + G N   P F    Y   VSE AS  + V  +  S
Sbjct: 3442 PDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFAS 3491



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 14/173 (8%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 3113 NINRHSFIVTSSDRGSPSLLSETTVTINIVDSNDNAPQFLNSKYFTPVTKNVRVGTKLLK 3172

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
            +  I+  D D G+N+EI Y I +   T + KF++D  +G +     LI+   + + +TV 
Sbjct: 3173 VTAID--DKDFGLNSEIEYFISN--ETPVEKFKLDSTTGWVSVASSLISDLNQNFLMTVI 3228

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G    SSQ  V++ VV   N  SP F Q+     V E  S+ S V T++
Sbjct: 3229 ARDKGNPPLSSQATVQI-VVTEENYHSPEFSQSHISATVPESQSVGSIVRTVS 3280



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 10/186 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1962 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITISDVNDHIPKFSRPVYSFDI 2016

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAG 119
             +       +  I ATD+D GVN EITY++      G+  F ++P +GV   T  L    
Sbjct: 2017 PEDTTPGSLVAAILATDDDSGVNGEITYTVNEDDEDGI--FFLNPVTGVFNLTRSLDYET 2074

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             QY I     + GG    TI     +   N   PVF   +Y  ++ E   + ST+    V
Sbjct: 2075 RQYYILTARAEDGGGQFMTIRIYFNILDVNDNPPVFSSTSYSTSLMENLPLGSTILIFNV 2134

Query: 180  SRLASG 185
            +    G
Sbjct: 2135 TDADDG 2140



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F V A + QG    +    TV   + DINDNAP+  +    Q    E      Q++++
Sbjct: 1341 FSFTVTASD-QGLPKPLKDQATVQVYMKDINDNAPKF-LKDFYQATISELAANLTQVLRV 1398

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  V       F ID  +G +   G+L   A   YS+ +QA D+
Sbjct: 1399 SASDVDEGSNGLIHYSV--VKGNEEKMFAIDSATGQVILAGQLDHEATASYSLLIQAVDS 1456

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +S+ +   N  +P F ++T  V+V E   I   V ++T +   SG
Sbjct: 1457 GTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVTSVTATDSDSG 1511



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  R I+++ A D D G NA +TY+I   ++  
Sbjct: 1894 ITLQDINDNPPVFPTDTLDLTVEENIGDGSR-IMQLTAMDADEGANALVTYAIISGADDS 1952

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             H   IDP SG +  T +L      +YS+ V+A D G +SS   + ++ +   N   P F
Sbjct: 1953 FH---IDPESGELIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHIPKF 2007

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 2008 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 2037



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 16/151 (10%)

Query: 41  VNLNDINDNAPRLPMIPPIQ----IQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           V+L D+NDN+P   +  P+Q    IQ  E A   I  + A+D D G N  + YSI   S 
Sbjct: 843 VSLLDVNDNSP---VFYPVQYFAHIQENEPAGSYITTVSASDPDSGPNGTVKYSI---SA 896

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS--QTIVEVSVVPGPNTR 151
               +F+I   +GVI T   L   E+  Y + V ATD G   S  Q IV ++V+   +  
Sbjct: 897 GDTSRFQIHSHTGVISTKMVLDREEKTAYQLQVVATDGGHLQSPNQAIVTITVLDTQD-N 955

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            PVF Q  Y   V E  ++   V +++ S +
Sbjct: 956 PPVFSQAVYSFVVFENVALGYHVGSVSASTM 986



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  ++   + + + D+NDNAP  L  +  + + +  +A   I + +A 
Sbjct: 1028 YQLKVVASGGMVTGETI---VNITVKDLNDNAPHFLQAVEWVNVVENWQAGHSIFQAKAL 1084

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG--G 133
            D D G+N  + YS+        + F ID ++G I     L +    Y + + A+D G   
Sbjct: 1085 DPDEGINGMVLYSL---KQNPKNLFTIDEKNGNISLLRPLDVHAGSYQVEILASDRGVPQ 1141

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             SS  I+ VSV    N   PVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 1142 LSSSFILTVSV-HDVNDNPPVFDQLSYEVTLSEAQPVNSLFFKVQASDQDSG 1192



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEAR 67
            LDR+      +   V+A +K     S    + V + DINDN P     +  ++I      
Sbjct: 2278 LDRE--EVSNYTLTVVATDKGQPPLSSSTEVAVIILDINDNNPVFAKALYKVEINENTLT 2335

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               IV++ A D D G N ++ YS+  +S     +FRID  +G++     L   ++  YS+
Sbjct: 2336 GTDIVQVYAADGDEGTNGQVRYSL--LSGNENQEFRIDSVTGILSVAKPLDREKKAMYSL 2393

Query: 125  TVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            TVQ+ D G        +V ++    N   PVF+ + Y +N+ E
Sbjct: 2394 TVQSADRGSSPRMDTTKVDIILLDINDFVPVFELSPYSINIPE 2436



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 15/136 (11%)

Query: 39   LTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            +++ L D+NDNAP     +L  +P    +       + K +ATD D G N+ I Y++   
Sbjct: 2203 VSIILLDVNDNAPTFISPKLTYVP----ENTPTDTVVFKAQATDRDSGPNSYIEYTLL-- 2256

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
             N   +KF I    G +  TG+L   E   Y++TV ATD G     +  EV+V +   N 
Sbjct: 2257 -NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVAVIILDIND 2315

Query: 151  RSPVFQQNTYDVNVSE 166
             +PVF +  Y V ++E
Sbjct: 2316 NNPVFAKALYKVEINE 2331



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 30/195 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VS+  LDR+      ++  V   +K        + + V + DINDN P   +      Q
Sbjct: 370 LVSRGGLDREAT--AYYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 424

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F +DP +G+I     L 
Sbjct: 425 AGVPEDAAVGSSVLQVSAADADEGTNADIRYQLQEDGG----PFHMDPETGLITVREPLD 480

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+T+QA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 481 YEARRQYSLTLQAHDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRFASVD 536

Query: 166 EGASINSTVATITVS 180
           E A + + VA +TV+
Sbjct: 537 ENAQVGTVVALLTVT 551



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI--PPIQ 60
            + S  +LDR+     ++   V   +K     S  V++ +N+ D NDNAPR   I   P+ 
Sbjct: 2893 IRSIRSLDRE--KVSQYVLTVRCSDKGTPPQSTTVTVIINVLDENDNAPRFSQIFTAPVP 2950

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IA 118
              A      + ++  +D D+GVNA   YSI   ++T L  F I+P +G I  +  L    
Sbjct: 2951 ENA-PLGYTVTRVTTSDEDIGVNAVSRYSI---TDTSL-PFTINPSTGDIIISRPLNRED 3005

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++Y I V A D+G   S  +     V   N  +P F++ +Y ++  E   I + VA ++
Sbjct: 3006 TDRYRIRVSAHDSGWTVSTDV--AIFVTDVNDNAPRFKKPSYYLDCPELTEIGAKVAQVS 3063

Query: 179  VS 180
             +
Sbjct: 3064 AT 3065



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAPR------LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D+NDN P       L   P + I +      +  I A D D G N E+ Y I  
Sbjct: 1681 VTILVTDLNDNVPMFISQNALAADPSVMIGS-----ILTTIVAADPDEGANGEVEYEII- 1734

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +  +  L+  +  YS+ + ATD G +  ++  E++++      
Sbjct: 1735 --NGDTETFMVDRYSGDLRVSSALVPSQLIYSLIISATDLGPERRKSTTEMTIIL-QGLD 1791

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             PVF Q  Y   + EG  I + V +I
Sbjct: 1792 GPVFTQPKYITILKEGEPIGTNVISI 1817



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L++++ D NDN P  P    + +   E  R    +  + ATD+D G NA+I YSI   
Sbjct: 1465 CTLSIDILDENDNTPSFPK-STLFVDVLENMRIGELVTSVTATDSDSGDNADIHYSITGT 1523

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1524 NNHG--TFSISPNTGGIFLAKKLDFETQPLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1581

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       +++E   I S+V ++T
Sbjct: 1582 NPPTFPPGDIFKSITENLPIGSSVISVT 1609



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R I+ + A 
Sbjct: 2802 KYVVWIEARDAGFPPFSSYEKLAIAVLDVNDNSPVFKDDPFVAEILENLSPRTILTVSAI 2861

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y+I  V+    + F I   +G I +   L   +  QY +TV+ +D G  
Sbjct: 2862 DKDSGPNGQLEYNI--VNGNTENSFSIHHSTGEIRSIRSLDREKVSQYVLTVRCSDKGTP 2919

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               T V V + V   N  +P F Q  +   V E A +  TV  +T S
Sbjct: 2920 PQSTTVTVIINVLDENDNAPRFSQ-IFTAPVPENAPLGYTVTRVTTS 2965



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 32/168 (19%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMI----------PPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P    +          PP    +G        + ATD D G
Sbjct: 620 ARSSVASLVIFVNDINDHPPVFSQLVYRVNLSEEAPPGSYVSG--------VSATDGDSG 671

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGK--- 134
           +NA + YSI  +S   L  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 672 LNANLRYSI--ISGNELDWFHISDHSGLVTTAAAGGLDRERASQVVLNISARDQGVHPKV 729

Query: 135 -SSQTIVEVSVVPGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
             +Q IV V  V   N   PVF Q   Y+V+V+E A   + +  I  S
Sbjct: 730 SYAQLIVTVLDV---NDEKPVFSQEAGYEVSVAENAPAGTDLLVIEAS 774



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 10/150 (6%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A ++     S    LTV+++D+NDN P    +   ++   EA+       K+
Sbjct: 1126 GSYQVEILASDRGVPQLSSSFILTVSVHDVNDNPPVFDQL-SYEVTLSEAQPVNSLFFKV 1184

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            +A+D D G N EI YSI    NTG + F I P  G +    +L     ++Y + V A+D 
Sbjct: 1185 QASDQDSGANGEIAYSIAE-GNTG-NAFGIFP-DGQLYVKSELDRELQDRYVLLVVASDR 1241

Query: 132  GGKSSQTIVEVSVV-PGPNTRSPVFQQNTY 160
              +     V V+V+    N   P+F    Y
Sbjct: 1242 AVEPLSATVNVTVILEDVNDNRPLFNSTNY 1271



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 25/174 (14%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD D+G N    
Sbjct: 281 SAPTYPTEVRVLVRDLNDNAPVFPE-PSIVVTFKEDSSSGRQVILDTATDADIGSNGVDH 339

Query: 88  YSIYHVSNTGLHKFRID---------------PRSGVIETTGKLIAGEQYSITVQATDTG 132
            S   V      +FR+D                R G+        A   Y + V+  D G
Sbjct: 340 RSYRIVGGNEAGRFRLDITLNPSGEGAFLHLVSRGGLDRE-----ATAYYQLLVEVEDKG 394

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               +  ++V+V V   N   PVF  + Y   V E A++ S+V  ++ +    G
Sbjct: 395 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVSAADADEG 448



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   ++    ++  +V ++ A+D D+GV+ E+ Y I+  S 
Sbjct: 3451 TVNIQLKGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFASDRDMGVDGEVHYLIFGTSR 3510

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
                 F+I+ R+G I  +G L     E+ S+ V A ++G      + EV+V   +   N 
Sbjct: 3511 K--KGFQINSRTGQIYVSGFLDREKEERISLKVLAKNSGSIRGADVDEVTVNITILDAND 3568

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF    Y+V +SEG  I + V  ++
Sbjct: 3569 -PPVFSLEIYNVQISEGVPIGTHVTFVS 3595



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 20/193 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P       +     E
Sbjct: 1221 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYVFYFEEE 1278

Query: 66   AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
             R    +  I A D D G N E+ YS      T    F ++  SG I +T +        
Sbjct: 1279 QRGGSFVGMINAIDKDFGPNGEVRYSF----ETMQPDFELNAISGEITSTHQFDRESLMR 1334

Query: 118  --AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                  +S TV A+D G       Q  V+V  +   N  +P F ++ Y   +SE A+  +
Sbjct: 1335 QRGAAVFSFTVTASDQGLPKPLKDQATVQV-YMKDINDNAPKFLKDFYQATISELAANLT 1393

Query: 173  TVATITVSRLASG 185
             V  ++ S +  G
Sbjct: 1394 QVLRVSASDVDEG 1406



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 53/141 (37%), Gaps = 11/141 (7%)

Query: 45   DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDN PR    P     P    +G     +  +  TD D G N+E+ YS+   +     
Sbjct: 2626 DVNDNPPRFQHHPYVTHIPSPTPSGSF---VFSVTVTDPDTGPNSELHYSL---TGRNSE 2679

Query: 100  KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            KF IDP  G I     L    + +  V   D G         V+V  G     P  +   
Sbjct: 2680 KFHIDPLRGAIMAAELLNTASEMTFFVHVKDGGLSPKMDSTTVTVRFGNKGDFPKIRAKQ 2739

Query: 160  YDVNVSEGASINSTVATITVS 180
            +     E   I + + TIT S
Sbjct: 2740 HTFLFPESQPIGTLITTITGS 2760



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 15/176 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-----KI 73
            F   VIAR+K     S   ++ + + + N ++P         I A     Q V      +
Sbjct: 3223 FLMTVIARDKGNPPLSSQATVQIVVTEENYHSPEFSQS---HISATVPESQSVGSIVRTV 3279

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATD 130
             A D D  +N  ITY I   +  GL  F I+  +G + T  K +  E   ++ +T+ ATD
Sbjct: 3280 SARDRDAAMNGLITYHISSGNENGL--FAINASTGTL-TLAKPLDYELHQKHEMTISATD 3336

Query: 131  TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G ++  +   + + V   N  SP+F    Y   V E A   +TV  +  +   SG
Sbjct: 3337 GGWRARTSYCSIIINVLDVNDNSPIFIPEEYSPTVLENAPSGTTVMRLNATDADSG 3392



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)

Query: 43   LNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            L DIND  P   + P     P  ++A    + I+++ A D+D G N+++TY++  +    
Sbjct: 2415 LLDINDFVPVFELSPYSINIPENLEA--LPKTILQVVARDDDQGSNSKLTYTL--IGGNE 2470

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
             + F I   SG ++   KL     E+  + + ATD+G  +      V+V V   N   P 
Sbjct: 2471 DNAF-ILSASGELKVRQKLDRETKEKCILLITATDSGSPALTGTGTVNVIVSDVNDNVPT 2529

Query: 155  FQQNTYDVNVSEGASINSTVATITVS 180
            F   TY   +SE A   S V  ++ S
Sbjct: 2530 FAHKTYSATISEDAPTGSDVLLVSAS 2555



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            ++  + A+++     S  +S+ +++ D NDN P     PP  I             ++ +
Sbjct: 1552 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTF---PPGDIFKSITENLPIGSSVISV 1608

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
             A D D  +N ++TY+I      G H F ID   G I T  ++       + +TV+A+D
Sbjct: 1609 TARDPDADINGQLTYAIIQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTVKASD 1666


>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3 [Papio anubis]
          Length = 4291

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 1102 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1161

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1162 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1220

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1221 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1265



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 559 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 611

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D  +NA + Y               F IDPRSG+I 
Sbjct: 612 QYRETLRENVEEGYPILQLRATDGDAPLNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 671

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 672 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 731

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 732 DVRPHTVVLRVTAT 745



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 1021 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 1075

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 1076 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 1134

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 1135 QFVASHYTGLVSEDAPPFTSVLQISAT 1161



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 889  LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 945

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
                +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 946  VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 1001

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 1002 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 1058



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 519 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 578

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 579 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 633



 Score = 43.9 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1225 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1281

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V ++   N 
Sbjct: 1282 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLI-DQND 1339

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1340 NSPVLNNFQILFNNYVSNRSD 1360



 Score = 42.7 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 701 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 758

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 759 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 816

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 817 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 848


>gi|348561957|ref|XP_003466777.1| PREDICTED: cadherin-18-like [Cavia porcellus]
          Length = 751

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 18/187 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
           + S ++LDR+         Q I R +            + + DINDNAP+    P     
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           P     G +  Q+   +A D   G +A + YSI      G   F +DP++GVI T    +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224

Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
              A E YS+ +QA D     GG S  T V +++    N   P F Q  Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283

Query: 171 NSTVATI 177
            S V  I
Sbjct: 284 GSAVGKI 290



 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
            N+DR+      +   + A++  G    +  S TVN  L D+NDN PR P     +  P 
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGK 115
             Q G A   + KI+A D D+G NA++TYSI  ++  G+  F I    D R G+I     
Sbjct: 280 SAQVGSA---VGKIKANDADIGSNADMTYSI--INGDGIGIFSISTDKDTREGIISLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRVSQLGPFKDATMLKIIV--GDVDEPPLFSMPSYIMEV 392

Query: 165 SEGASINSTVATI 177
            E A I +TV T+
Sbjct: 393 YENAKIGTTVGTV 405


>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
          Length = 3211

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 837 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 891

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 892 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 950

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 951 QFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 713 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 771

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 772 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 827

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 828 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 874



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 335 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 394

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 395 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 449



 Score = 43.9 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V ++   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLI-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176



 Score = 42.7 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 633 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 664


>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
            [Cavia porcellus]
          Length = 3309

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 917  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSHYTGLVSEDAPPFTSVLQISAT 976

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 977  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1035

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1036 PLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1080



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 374 LIRTAAALDRESME--RHYLRVTAQDHGLPRLSATTMVAVTVADRNDHSPVFE-----QA 426

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNT---GLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D  +NA + Y       T       F IDPRSG+I 
Sbjct: 427 QYRETLRENVEEGYPILQLRATDGDAPLNANLHYRFVGPPATRKAAAAAFEIDPRSGLIS 486

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 487 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 546

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 547 DVRPHTVVLRVTAT 560



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 867 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 922

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 923 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVTSHYTGLVSEDAPPFTSVLQISAT 976



 Score = 46.2 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP SG+I T   L   + E++ + V
Sbjct: 334 VLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDPHSGLIRTAAALDRESMERHYLRV 393

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 394 TAQDHGLPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 448



 Score = 44.7 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
           +LDR+      + F V AR+      S   S+TV + D+NDN P         ++  E  
Sbjct: 703 SLDRESVE--HYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEF-TTKEYHLRLNEDA 759

Query: 66  -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQ 121
                +V + A D D   N  I+Y I        ++F I  + GV   T  L      E+
Sbjct: 760 AVGTSVVSVTAVDRD--ANNAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQER 815

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           Y   V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 816 YFKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 873



 Score = 43.5 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 516 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANGLVHYN 573

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y + ++A D G    S+ T +    V
Sbjct: 574 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQV 631

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 632 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 663



 Score = 43.1 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1040 PVSIQVIVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1096

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1097 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1154

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1155 NSPVLNNFQILFNNYVSNRSD 1175


>gi|149640354|ref|XP_001507255.1| PREDICTED: protocadherin beta-2-like [Ornithorhynchus anatinus]
          Length = 795

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 45  DINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           DINDNAP    P+      +       ++ + A D D G   EITYSI+ VS      F 
Sbjct: 234 DINDNAPVFTQPLYETRIPENSPMGSLLLTVSAKDLDTGNYGEITYSIFQVSEEIRKTFL 293

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
           IDPR+G I  +G+L   E   Y + VQATD GG S ++ V V V
Sbjct: 294 IDPRTGEIRLSGQLDFEEHKSYPVNVQATDGGGLSGKSTVLVQV 337


>gi|196006169|ref|XP_002112951.1| hypothetical protein TRIADDRAFT_25152 [Trichoplax adhaerens]
 gi|190584992|gb|EDV25061.1| hypothetical protein TRIADDRAFT_25152, partial [Trichoplax adhaerens]
          Length = 2391

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 28/156 (17%)

Query: 45   DINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            DINDN P+              PP ++          +I A D D   N+ ITYSI  VS
Sbjct: 1275 DINDNPPQFSNQSHTFYIPENFPPTKVD---------RIIAVDKDKDSNSRITYSI--VS 1323

Query: 95   NTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                + F I+P++G + TT  L    IA  QY +TV A D G  S  +  +V+V V   N
Sbjct: 1324 GNVDNSFLINPQTGELSTTKSLNRERIA--QYQLTVMAKDNGSPSLNSTTKVTVIVTDQN 1381

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               P F Q  Y  +++E  +IN+TV T+  +   SG
Sbjct: 1382 DHDPKFNQTRYSASIAESVAINTTVTTVYATDADSG 1417



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 13/167 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEAT 76
            F   + AR++     S  V+  + L+D N +AP+  +     +   +A +   ++K+ A 
Sbjct: 2085 FVLTLQARDQGTVPQSGYVTAEIYLDDANSHAPKFNVSQYQALVTLDANKTDIVIKLHAN 2144

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATD--- 130
            D D G N ++ YSI   +N  L  F+I P +G++ T  +++  +    Y++T+ A+D   
Sbjct: 2145 DQDHGANGQVKYSIISGNNKKL--FQIQPTTGIV-TVSRILNQQDIGVYNLTILASDGAA 2201

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             G ++S T+V +++   P  ++P F Q  Y  +++E + I STV TI
Sbjct: 2202 IGTRNSTTLVTITISKSP--QAPRFSQQQYFGSIAENSRIGSTVMTI 2246



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSN 95
           LT+ + D NDNAP+      + +   EA      + +++ATD D G N++++YS  +V+ 
Sbjct: 523 LTIQILDNNDNAPQFKQ-SHVSVNISEASTAGTLVYQVKATDPDAGTNSQLSYSFVNVTQ 581

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              + F I+  +G I T  K +  E    Y++ V+  D G    Q I+ + + V   N  
Sbjct: 582 N--NHFDINTTTGRI-TIKKSLDYENRSSYTLFVKTQDAGHPPRQAILTLDIHVLDENDH 638

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           SP FQQ +Y+  VS+G  I + V  +
Sbjct: 639 SPQFQQISYNFGVSQGQPIGTWVGHV 664



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V++ + + D NDNAPR      IQ   +       I +I A D+D   N  I Y I    
Sbjct: 1057 VNVVIWVADQNDNAPRFIGTSHIQAVNEDESVGTTIAQIIAVDDDSRQNNNIEYHIVEGD 1116

Query: 95   NTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            N G  KF +D  +GV+    KL     +QY++ + ATD G     + ++++V V   N  
Sbjct: 1117 NEG--KFALDVDNGVLSIASKLDYERKKQYALNISATDKGIPRRSSYMKLTVYVVDVNDH 1174

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            +P F +  Y  +++E   +N+ +A++
Sbjct: 1175 APTFNKTIYTASINENVPLNTFIASV 1200



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 8/142 (5%)

Query: 40  TVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           T+++ D NDN+P   P +    I ++     ++V ++A D D G NA+ITYSI  V++  
Sbjct: 119 TIHVQDANDNSPVFNPNVYSTSINESVPIGTKVVTVKANDRDQGANAQITYSI--VTSAY 176

Query: 98  LHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            + F I+  +G+I+T  +L     ++  + +QA+D G  +S   V ++++   N   P F
Sbjct: 177 SNWFAINSTTGMIKTVDQLDYDVTKKVDLIIQASD-GLYTSTCNVNITILDA-NDNPPYF 234

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +  +Y  NV E A+I + V T+
Sbjct: 235 RFQSYSGNVDENAAIGTPVITV 256



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 8/170 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
            F   V A +   T      S+ +++ D+ND+ P    +PP+ I        I+ +  T +
Sbjct: 1772 FDLIVKAYDYNDTTLYSTCSVRISVIDMNDSPPLFHYVPPVNISENTQVGTIITL-VTAS 1830

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKS 135
            D  V + ITYS +  +  G   F ID   G+I T  + +  E+   Y + VQATD   K+
Sbjct: 1831 DSDVRSNITYS-FKPNGNGNDTFSIDSFRGLI-TLARRLDYERITSYELIVQATDQIQKA 1888

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             QTI+ V+V+   N  +PVF + TY+  + E +  +  V T+  +   SG
Sbjct: 1889 -QTILIVNVL-DYNDNAPVFDKPTYEATLQEFSPPHQPVVTVHATDQDSG 1936



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           ++ +K  LDR       F   VIAR++  T  +    + +N+ ++N+  P       P  
Sbjct: 701 IITTKTLLDRTVQ--SIFNLTVIARDQGITPRNATTEVIINVGEVNNYLPVFAKHNYPVS 758

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            ++  E    IV+++A+D D+G +  I Y+I  +     + F I+  +G I T G L A 
Sbjct: 759 IVENVEIGTLIVQVQASDKDIGKSGSIVYAI--LDGNPNNAFIINATTGRITTHGPLDAE 816

Query: 120 EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           ++  Y + V ATD G  +      V V V   +   P F +    + + E   +N+T+ T
Sbjct: 817 KRQYYRLNVTATDEGATAKMDWCTVQVNVTDVDDNIPTFTKQEITIAIKENIPLNTTIVT 876

Query: 177 I 177
           +
Sbjct: 877 V 877



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 20/157 (12%)

Query: 37  VSLTVNLNDINDNAPRLPMIP---------PIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           ++L +++ D ND++P+   I          PI    G        ++A D+D G+NA++T
Sbjct: 626 LTLDIHVLDENDHSPQFQQISYNFGVSQGQPIGTWVGH-------VDARDDDTGLNAQLT 678

Query: 88  YSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
           Y     S  G    F I+P +G+I T   L    Q  +++TV A D G        EV +
Sbjct: 679 YQFLQASAPGSSTNFSINPVTGIITTKTLLDRTVQSIFNLTVIARDQGITPRNATTEVII 738

Query: 145 VPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G  N   PVF ++ Y V++ E   I + +  +  S
Sbjct: 739 NVGEVNNYLPVFAKHNYPVSIVENVEIGTLIVQVQAS 775



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 12/102 (11%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPI-QIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
            VS+ V + DIND  P    +P +  I +  + +  I+ ++A DND G N +I+YS + VS
Sbjct: 1478 VSVDVRVTDINDVIPTFTQVPYVVNISSSTSPQTSIISVQAIDNDFGSNGQISYS-FDVS 1536

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQATDTG 132
             +   +F I+  +GVI+T   L  G+    +Y++ + ATD G
Sbjct: 1537 TS---RFSINSSTGVIKTIASL--GDRPNYRYTLRLIATDHG 1573



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 9/150 (6%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            L VN+ D NDNAP    P       +     + +V + ATD D G N+ I YSI     T
Sbjct: 1892 LIVNVLDYNDNAPVFDKPTYEATLQEFSPPHQPVVTVHATDQDSGDNSRIVYSI---EIT 1948

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI---TVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
              ++F I+  +G I T   +       I    + A D G      +V V + +   N ++
Sbjct: 1949 STNQFYINSTTGTIYTDRTIEYNPNMPIIQLVITARDNGFPQLIALVPVRIQITDVNDKA 2008

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRL 182
            PVF +N Y  +V E   I + +  +  + L
Sbjct: 2009 PVFDKNKYIQHVPENVPIGTEILQVHATDL 2038



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 19/173 (10%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIV 71
             +++  V+A++    + +    +TV + D ND+ P+       +  A  A        + 
Sbjct: 1351 AQYQLTVMAKDNGSPSLNSTTKVTVIVTDQNDHDPKFNQT---RYSASIAESVAINTTVT 1407

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL----IAGEQYSITV 126
             + ATD D G N  I YSI    N  +HK F I+P +G I T  +L    IA   Y+  V
Sbjct: 1408 TVYATDADSGPNQIIRYSIIGTDN--VHKAFTINPVTGRIATAARLDRETIAS--YNFLV 1463

Query: 127  QATDTGGKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             A+D      +T IV V V V   N   P F Q  Y VN+S   S  +++ ++
Sbjct: 1464 NASDMSPFGIRTAIVSVDVRVTDINDVIPTFTQVPYVVNISSSTSPQTSIISV 1516



 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 15/130 (11%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           ++++ A+D D G NA+I YSI  +S      F I+  +G I+   +L   +   Y +T+ 
Sbjct: 36  VLRVYASDRDAGNNAKILYSI--ISQPSSQAFSINSTTGQIQVQRQLDYESRSSYGLTIG 93

Query: 128 ATDTGGKSSQTIVEVS-----------VVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           A + G   + +   +             V   N  SPVF  N Y  +++E   I + V T
Sbjct: 94  ANNPGDSPTTSFATIQPTLSTSKVATIHVQDANDNSPVFNPNVYSTSINESVPIGTKVVT 153

Query: 177 ITVSRLASGC 186
           +  +    G 
Sbjct: 154 VKANDRDQGA 163



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAG-EARRQIVKIEA 75
            ++   + A +K     S  + LTV + D+ND+AP     I    I         I  + A
Sbjct: 1143 QYALNISATDKGIPRRSSYMKLTVYVVDVNDHAPTFNKTIYTASINENVPLNTFIASVAA 1202

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG 132
             D D G   +ITYSI   S      F+ID ++G I TT K +  E   QY +TV A D  
Sbjct: 1203 YDRDTGKYGKITYSI--PSGIANDTFKIDSQAGRI-TTAKYLDREQHPQYILTVDAHDNA 1259

Query: 133  --GKSSQTIVEVSVV 145
               K S T V ++V+
Sbjct: 1260 LPSKYSSTQVVITVL 1274



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 12/151 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
            ++L +NL D+NDN PR        +   E+ R    I  I ATD D    A I Y I   
Sbjct: 1685 LTLQINLTDVNDNRPRFKH-EYYHLTIDESTRAGMAIYPIVATDRDSNEFALIRYEIV-A 1742

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS--SQTIVEVSVVPGPN 149
             N G   F I  RSG + T   L   +   + + V+A D    +  S   V +SV+   N
Sbjct: 1743 GNLG-QTFGISERSGQLYTMKNLDYEKYPSFDLIVKAYDYNDTTLYSTCSVRISVI-DMN 1800

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               P+F      VN+SE   + + +  +T S
Sbjct: 1801 DSPPLFHY-VPPVNISENTQVGTIITLVTAS 1830



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 16/167 (9%)

Query: 14   PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-----IQAGEARR 68
            PN    +  + AR+         V + + + D+ND AP       IQ     +  G    
Sbjct: 1972 PNMPIIQLVITARDNGFPQLIALVPVRIQITDVNDKAPVFDKNKYIQHVPENVPIGT--- 2028

Query: 69   QIVKIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YS 123
            +I+++ ATD D    N+ ITYSI   +N GL  F ++  SG+I+   +L    Q    + 
Sbjct: 2029 EILQVHATDLDRSRRNSIITYSIISGNNYGL--FEMNNISGIIKNIKRLNVNGQNDRLFV 2086

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            +T+QA D G       V   + +   N+ +P F  + Y   V+  A+
Sbjct: 2087 LTLQARDQGTVPQSGYVTAEIYLDDANSHAPKFNVSQYQALVTLDAN 2133



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 41  VNLNDINDNAPRLPMI-PPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGL 98
           V +NDINDN P+       IQ+        ++ +  A D D G N +ITY I  V N   
Sbjct: 421 VQVNDINDNYPQFDKSNQAIQLFENTTIGTVIYQAIAHDKDSGQNGQITYGI--VENF-F 477

Query: 99  HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPV 154
           + F ID R+G I     L       IT+  T T        S  ++ + ++   N  +P 
Sbjct: 478 NSFAIDSRNGNITLMQSLDRELVNIITLNITATDRSQDKFLSWMLLTIQILDN-NDNAPQ 536

Query: 155 FQQNTYDVNVSEGASINSTV 174
           F+Q+   VN+SE ++  + V
Sbjct: 537 FKQSHVSVNISEASTAGTLV 556


>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
 gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
          Length = 2585

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 38   SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+ DINDN P   M       ++      ++ K+ AT  D+GVNA+I Y I   + 
Sbjct: 1467 TVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 1526

Query: 96   TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
             G  KF++D  +G  V+  T      + Y +T+QA D G    S+   V +S++   N  
Sbjct: 1527 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISIL-DINDN 1583

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            SP F QN Y +NV+E   + S +  +
Sbjct: 1584 SPKFLQNLYRINVNEDIFVGSKILDV 1609



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 18   KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
            KF F  I     GT    P+S    + +++ DINDN+P+  +    +I   E      +I
Sbjct: 1551 KFYFLTIQAIDGGTP---PLSNNAYVNISILDINDNSPKF-LQNLYRINVNEDIFVGSKI 1606

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
            + ++ATD D  VN  +TY+I    N G  +F +DP++G I  +  L       Y++ +QA
Sbjct: 1607 LDVKATDEDSDVNGLVTYNIERGDNIG--QFSVDPKNGTISVSRPLDRETISHYTLEIQA 1664

Query: 129  TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             D G       V +++ +   N  +P+F    Y V + E   +     T  +S
Sbjct: 1665 CDQGDPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYIFLTFKIS 1717



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20   RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
            +++++A  + G   +      + + +NDINDN P   M      +P    +  +    I 
Sbjct: 1343 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNTPIFSMAQYRVSVP----EDAQLNTLIT 1398

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
            K+ A D D GVN +I YS+   ++     F+I   +G+I     L       +++TV+A 
Sbjct: 1399 KVHAMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLDKSLDRETISLFNLTVKAE 1455

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G     +I  V+V +   N   P F    Y   + E A+  + V  +  + +  G
Sbjct: 1456 DCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 1512



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 11/169 (6%)

Query: 18  KFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGEARRQIVKI 73
           K+   V+  +  G+ + S   ++ + + D+NDNAP    + P    ++     R Q V +
Sbjct: 622 KYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAP--CFVEPSYFTKLSVAAVRGQFVAL 679

Query: 74  -EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            +A D D+     + Y I  V    L  + I+  +GVI     L   ++ S  +  + + 
Sbjct: 680 PKAYDKDISDTDSLEYKI--VYGNELQTYSINKLTGVISLQNMLNFTDKSSTVLNISVSD 737

Query: 133 G-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           G  ++   +++S++P  N  SP F Q+TY+  V E       + T+  S
Sbjct: 738 GVHTAYARLKISLLP-ENVYSPQFDQSTYEAQVPENLLHGHNIITVKAS 785



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 18/165 (10%)

Query: 22   QVIAREKQ--------GTAASVPVSLT-----VNLNDINDNAPRLP--MIPPIQIQAGEA 66
            Q + RE+Q           ++VPV        +++ D NDN P+           +  E 
Sbjct: 1025 QTLDREQQESHNLIVVAETSTVPVFFAYADVFIDVRDENDNYPKFDNTFYSASVAENSEK 1084

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
               +VK+ ATD D G N +I Y +   +    + F ID  SG I     L      +Y+ 
Sbjct: 1085 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 1144

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V A D G       V V++ +   N  +PVF+     ++V E A
Sbjct: 1145 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENA 1189



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 10/140 (7%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
           V L+V++ D+ND  P +   I  I I +      QI+KI ATD D G NA+++Y I  + 
Sbjct: 534 VVLSVSIMDVNDCYPEIESDIYNITIPENASFGTQILKINATDKDSGANAKLSYYIESIN 593

Query: 94  --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
             +N+ L  F ID   G   ++T       + + I V   D G  S  +   V + V   
Sbjct: 594 GQNNSEL--FYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDL 651

Query: 149 NTRSPVFQQNTYDVNVSEGA 168
           N  +P F + +Y   +S  A
Sbjct: 652 NDNAPCFVEPSYFTKLSVAA 671



 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 38  SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           S+ +++ D+NDN P    +P    + I   +    I++++A D D   N E+ Y +    
Sbjct: 334 SIYISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYEL-KKG 391

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
           N  L  F++D ++G + +  + + G    Y +TV A D      SS+  ++V V+   + 
Sbjct: 392 NGEL--FKLDRKTGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVI---DR 445

Query: 151 RSPVFQQNTYDVNVSEGASINSTVA 175
             PVF++  Y V+V E   + S ++
Sbjct: 446 SMPVFEKQFYTVSVKEDVEMYSALS 470



 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSIT 125
             I+ ++A+D D G  A + Y I  VS      F ID  +GVI  + T      ++Y + 
Sbjct: 777 HNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQSTGVITSKVTFDREKKDEYVVL 834

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ +D GGK     ++V VV   N   P F    Y + VS     N T+ T+
Sbjct: 835 LKVSDGGGKFGFASLKVIVVD-VNDNVPYFLLKEYKMVVSTTVEANRTILTV 885


>gi|193207741|ref|NP_506256.3| Protein FMI-1 [Caenorhabditis elegans]
 gi|37048691|gb|AAQ84880.1| flamingo-like protein FMI-1 [Caenorhabditis elegans]
 gi|169402906|emb|CAB01427.3| Protein FMI-1 [Caenorhabditis elegans]
          Length = 2596

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 20/165 (12%)

Query: 24  IAREKQGT--AASVPVSLTVNLNDINDNAPRL----PMIPPIQ-IQAGEARRQIVKIEAT 76
           + R K G   A S  V LT+N+ DIND+AP L     MI   + +  GE   ++ ++ A 
Sbjct: 448 VIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGE---EVGRVYAI 504

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
           D D G N  I YS+      G   F ID  SG+I+TT KL+  E   +YS+ V A D G 
Sbjct: 505 DEDSGPNGIIKYSM-----EGSEDFIIDEDSGLIKTT-KLLDRETTARYSLKVTARDMGT 558

Query: 134 KSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S  T   ++VV    N  +P F +  Y+V +SE     S + T+
Sbjct: 559 PSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITL 603



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 14/178 (7%)

Query: 10  DRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAG 64
           D D  +   F   V A +      +    + V L+DINDN+P+             I  G
Sbjct: 741 DLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVG 800

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGEQYS 123
            +    +++ A D D+G N  + Y +   S++  +  FR+D  SG +  + KL   EQ++
Sbjct: 801 TS---FLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKL-DREQFA 856

Query: 124 ITVQ---ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + V    A D G  S     E+++ +   N  +P F+Q +YD+ ++E + + STV TI
Sbjct: 857 VIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTI 914



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 21/182 (11%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           +++DR+  +  K   +V A E+     S   ++ V++ D+ DN+P    I       GE 
Sbjct: 226 KSMDREVLD--KHILKVTAYERVDPTISASTTVVVHVLDVQDNSP----IFEKDSYFGEI 279

Query: 67  RRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           R        ++ + A D D G N EI YS+      G +   I+ +SGVI+T   L   E
Sbjct: 280 REDAPIGTTVLSVFARDLDSGENGEIEYSLGE--GNGKNLLAINAKSGVIQTAAPL-DRE 336

Query: 121 QYSIT---VQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             S+    V A+D G   + S  +VE++VV   N  +PVF  ++Y+V + E  +I + +A
Sbjct: 337 TLSLIRLDVIASDKGTPKRESTAMVEITVV-DVNDNAPVFASDSYNVTILENITIPAVIA 395

Query: 176 TI 177
           T+
Sbjct: 396 TV 397



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 9/179 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ + + LDR+     ++  +V AR+    + +   ++ V L DINDNAP          
Sbjct: 532 LIKTTKLLDRE--TTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVT 589

Query: 62  QAGEARR--QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-A 118
            + E  R  QI+ ++A DND   + +ITY I            I  +  ++  +G+L   
Sbjct: 590 ISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ 647

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +  + + ATD GG   + +V V  +   N+ +P F  + + V + E + I   V T+
Sbjct: 648 DHKVRVEISATDQGGLQGRCVVNV-FIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITL 704



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ ++A D+D G NA I YSI          FRIDP SG I  +  L   ++  +S+ V 
Sbjct: 701 VITLKAEDHDRGDNARIVYSI-----DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVT 755

Query: 128 ATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           A+D       T  ++ V+    N  SP F  ++Y   +SE   + ++   ++
Sbjct: 756 ASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVS 807



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 14/96 (14%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIPPIQIQAGEARRQIVK 72
           R  VIA +K          + + + D+NDNAP        + ++  I I A      I  
Sbjct: 342 RLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPA-----VIAT 396

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
           ++ATD D G N ++ YS+   S++G+    ID  +G
Sbjct: 397 VKATDEDFGTNGKVHYSM--ASSSGIGGLTIDYSTG 430


>gi|397495185|ref|XP_003818440.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
            [Pan paniscus]
          Length = 3312

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 927  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 987  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1045

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 384 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 436

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 557 DVRPHTVVLRVTAT 570



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 900

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 714 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 770

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 771 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 826

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 827 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 883



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 404 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 458



 Score = 42.7 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1050 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V + +V   N 
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHIRLV-DQND 1164

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185



 Score = 42.7 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 642 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 673


>gi|126337564|ref|XP_001362166.1| PREDICTED: protocadherin-9, partial [Monodelphis domestica]
          Length = 1113

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
          Length = 801

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 10/187 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDADTGVNGEISYSLFQASDEIGKTFKVDFLTGEIRLRKQLDFE 311

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLAS 184
           +VS L S
Sbjct: 370 SVSDLDS 376



 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
           +++TV ++D+NDNAP            +       I  + ATD D G NA++TYS+    
Sbjct: 436 LNMTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495

Query: 92  --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
             H+    L     D        +    A + +   V ATD G    SS+ +V V V+  
Sbjct: 496 DPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDA 555

Query: 148 PNTRSPV 154
            N  SP 
Sbjct: 556 -NDNSPF 561


>gi|156399515|ref|XP_001638547.1| predicted protein [Nematostella vectensis]
 gi|156225668|gb|EDO46484.1| predicted protein [Nematostella vectensis]
          Length = 3186

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 17/177 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEAT 76
            F F V+A++   T ++    + +N+ DINDN PR P  +      +   A   ++ ++A 
Sbjct: 2837 FSFNVLAKDGVHTGSAY---IEINVTDINDNQPRFPNSLYVGYVEENKAAGTSVMYVQAH 2893

Query: 77   DND---LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQAT 129
            D+D   LG NAEI Y++    N G  KF+ID  + ++ TT +++  E     ++ITV AT
Sbjct: 2894 DDDDPYLGGNAEIRYTL--TDNAG-GKFKIDANTALV-TTEEILDRETSPNSFTITVLAT 2949

Query: 130  DTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  K S T V    V   N  +PVF +  +   VSE       V +++ +   +G
Sbjct: 2950 DQGANKLSTTKVATIYVTDANDHAPVFTKRIFRGTVSEDVRPGYVVTSVSATDTDTG 3006



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 9/126 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVS-----NTGLHKFRIDPRSGVIETTGKLIAGEQYSI 124
            ++++   D D+G   E+TY +   +      +G  +FR+D  SG IE+T  L A   Y +
Sbjct: 908  VMQLPIIDKDMGSLGEVTYQLIDPTVSAGETSGYDRFRVDD-SGKIESTNILTANTLYKL 966

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTV--ATITVSR 181
              +A D G  + +  V+V +   P++ +PV F QN Y  +++E + +N+ V  AT T S 
Sbjct: 967  QAKAKDGGSPALEATVDVFISVYPSSDTPVRFSQNPYSASIAENSPLNTEVFRATATKSG 1026

Query: 182  LASGCA 187
             +SG A
Sbjct: 1027 SSSGIA 1032



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 20/196 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LV ++E LDR+  +P  F   V+A ++     S     T+ + D ND+AP        +I
Sbjct: 2926 LVTTEEILDRET-SPNSFTITVLATDQGANKLSTTKVATIYVTDANDHAPVFTK----RI 2980

Query: 62   QAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              G     +        + ATD D G NAE+ + + H +      F +DP  G +     
Sbjct: 2981 FRGTVSEDVRPGYVVTSVSATDTDTGPNAELEFVVTHGNEPA--AFYVDPSKGTVHVFDI 3038

Query: 116  L--IAGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            L     + Y++TV  +D G      +S   V +++    N  +P+F  N Y+  V+E  +
Sbjct: 3039 LNYTLRKSYNLTVTVSDRGMPVLSDNSPAYVLITITDA-NDNAPIFIPNQYNKTVAEDLA 3097

Query: 170  INSTVATITVSRLASG 185
            + S V  +T     SG
Sbjct: 3098 VGSPVVVVTAVDYDSG 3113



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 73/151 (48%), Gaps = 17/151 (11%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQ-----AGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V   V + D+NDN P L     +  Q        A   I  + A D+D G NA++T SI 
Sbjct: 1088 VECLVTVTDVNDNTP-LFTFDRVNKQFVVDNYAPANTIIATLRAVDSDEGANAQVTMSIQ 1146

Query: 92   HV--SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPG 147
                SN  +    ID  S V++TT KL     Y ITV+ATD G   + S+T V V V+  
Sbjct: 1147 GTVPSNAPI---TIDTPSNVLKTTTKLSTVIDYQITVRATDKGSPPQYSETTVIVKVL-- 1201

Query: 148  PNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
             N ++ PVF Q  Y V+V E   +   V ++
Sbjct: 1202 -NIQTPPVFGQAKYTVDVQENTKVGQQVISV 1231



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 25/181 (13%)

Query: 9    LDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            LD +  +PG   F+ QV A+E+     S   S+ + L D+ND+ P         +   +A
Sbjct: 2497 LDYEQLSPGDKTFKLQVRAQEENTNLYST-CSVAITLEDVNDDKPTF------DLGNYDA 2549

Query: 67   RRQ--------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            R +        ++ I+ATD D G    +TY +   S+     F ID  SG + T      
Sbjct: 2550 RVRENAPIGTTVITIKATDRDTGDAGVVTYFLKAGSD---EHFAIDVNSGTLTTKKSFDR 2606

Query: 119  GEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
              Q  +S+ V A D G   G  S+ +    +V   N   P F Q  +  +VSE A+I ++
Sbjct: 2607 EGQSLFSVIVIARDKGNNPGALSEEVAVKVLVVDENDSPPQFDQAEFQTSVSESATIGTS 2666

Query: 174  V 174
            +
Sbjct: 2667 I 2667



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 14/155 (9%)

Query: 39   LTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            + V+L DIND++P              I +G +   I K+ ATD D G + +I+Y   + 
Sbjct: 1294 VVVSLTDINDDSPTFTKSVYEFFANEDISSGTS---IGKVAATDRDSGSHGQISYRFLYA 1350

Query: 94   SNT-GLHKFRIDPRSGVIE-TTGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPG 147
            S+   + KF +D  +G+I   +GK +  E  S   + V+A D G      I EV + +  
Sbjct: 1351 SDIQSMDKFDLDQTTGIISLASGKSLDYEDISMHVLFVRAEDNGANKLSAIAEVRIYLRD 1410

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
             N   P F   +Y   +S  A +   V  +T + L
Sbjct: 1411 INDNDPKFSAASYHAKLSLDAPVLEHVVQVTATDL 1445



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 32/196 (16%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-------LTVNLNDINDNAPRL-- 53
            V++  +LDR+     K  + VI   + G     P         L V + D+NDN P    
Sbjct: 2276 VITTSSLDRET----KATYTVIITAEDGGHGKDPAERLMSYCFLEVEVQDVNDNYPSFIT 2331

Query: 54   -PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
               +  IQ         ++ + ATD D G NA+ITY+    ++    KF ID  SG I T
Sbjct: 2332 RAYLGSIQ-NTKPIGTSVLTVSATDPDAGDNAKITYAFKSPND----KFEIDSTSGDIRT 2386

Query: 113  ----TGKLIAGEQYSI------TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
                TG     E+ ++       +Q  D   +  +T V + +    +   PV  +N +  
Sbjct: 2387 KVALTGTKDVNEKMTVVASNTEAIQGGDANNRDRETEVTIYIT---DLAPPVCDKNLFTA 2443

Query: 163  NVSEGASINSTVATIT 178
             + E  S+NS V  ++
Sbjct: 2444 RILESLSVNSDVLKVS 2459



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 20/165 (12%)

Query: 23   VIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +  REKQ   AS P    + + + + D+NDNAP   MI  +      +R      +++A 
Sbjct: 1783 ITVREKQ---ASGPLENYIDVEITVLDVNDNAPFFTMISTLGRVNSNSRAGATAFQLQAR 1839

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS- 135
            D D G N  I + + ++       F I+P +  IE     +   +Y + +   D G  S 
Sbjct: 1840 DLDSGSNGLIGFQLENIPT----PFMINPLTRQIEVGQPRLQTSRYGLDIIPFDYGKPSV 1895

Query: 136  --SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              ++  V++  V  P    PVF +++Y   VSE A   + +  +T
Sbjct: 1896 NGTKATVDIETVQSP----PVFNESSYTFTVSERAPTMTKIGDVT 1936



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 17/156 (10%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + L DINDN P+          + +A     +V++ ATD D   N  I YSI   +  G 
Sbjct: 1406 IYLRDINDNDPKFSAASYHAKLSLDAPVLEHVVQVTATDLDTANNGRIRYSIVAGNQEG- 1464

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV---VP-GPNTRS 152
              F++   +G+I     L  +A   + +T++A D+G    +  V V V   +P GP    
Sbjct: 1465 -AFQVLTDNGLIRVAKSLTTVAASSFLLTLEAADSGDPERKGSVNVQVNVFLPDGP---- 1519

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
            P F  +   VN +EG + N  VA   V++ A+  A+
Sbjct: 1520 PKFVLDPVIVNATEGIAANQRVA---VAKAATSEAL 1552



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
           LDR+  +   F   VI  E + T   S  + + V + D++D+ P+   PM      +   
Sbjct: 535 LDREKMS---FYDLVIKAEDKATFPKSSNLYVMVKIQDVDDHFPQFTQPMYYAKAPEKSP 591

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
               +  ++  D+DLG    ++YSI     TG   F+I P SG+I TTG +    +   Y
Sbjct: 592 ENTFVTVVKVVDHDLG--ESVSYSI-----TGACSFKIVPTSGLILTTGPIDLTTEPSTY 644

Query: 123 SITVQATDTG-GKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
            + V AT +  G + +   +V+V     T S PVF+   Y ++V E
Sbjct: 645 ELVVTATSSNYGTTKRATGQVNVEITSKTESPPVFKNTPYAISVPE 690



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 27/174 (15%)

Query: 23  VIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR-----RQIVKIEA 75
           V A ++ G   A S  V+L + + D++DN    P+  P Q++   +      R I ++ A
Sbjct: 438 VTATDRNGLSGALSASVNLKIEVLDVDDNN-NAPVFNPQQLELTVSEDTAVGRTIRRVSA 496

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQ 127
           TD+D G + ++ YSI  +  +GL  F++        TTG LI            Y + ++
Sbjct: 497 TDSDDGSDGQVVYSI--IQGSGLGVFQVQA------TTGDLIVAAPLDREKMSFYDLVIK 548

Query: 128 ATD--TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           A D  T  KSS   V V  +   +   P F Q  Y     E +  N+ V  + V
Sbjct: 549 AEDKATFPKSSNLYVMVK-IQDVDDHFPQFTQPMYYAKAPEKSPENTFVTVVKV 601



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 16/164 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + +K++ DR+      F   VIAR+K     A S  V++ V + D ND+ P+       Q
Sbjct: 2598 LTTKKSFDRE--GQSLFSVIVIARDKGNNPGALSEEVAVKVLVVDENDSPPQFDQ-AEFQ 2654

Query: 61   IQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS------GVIE 111
                E+      I+++ ATD D+G NA++ Y I      G   F +   S      G ++
Sbjct: 2655 TSVSESATIGTSILEVVATDQDIGDNAKLEYFI--SGGDGRFWFAVQTISKSGRTYGEVQ 2712

Query: 112  TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               +L    + S T+  T T G+ S T   +  +   N   P+F
Sbjct: 2713 VDARLDFETKSSYTIDVTATDGRFSATTRVLITITDANDIVPMF 2756


>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
          Length = 4915

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1764 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1818

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1819 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRALDYEA 1876

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +V+   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1877 QQYYILTVRAEDGGGQFTTIRVYFNVL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1935

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1936 VTDADDG 1942



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSV--MKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GAISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S    + V+L D+NDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGLNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N  D NDNAP+        P+   ++ G    +
Sbjct: 2915 NINRHSFIVTSSDRGNPSLLSETTVTINTVDSNDNAPQFLKGKYFTPVTKNVKVG---TK 2971

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 2972 LIKVTAVDDRDFGLNSEVEYLISNENHFG--KFKLDNSTGWISVASSLISDLNQNFVITV 3029

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  SI + V T++
Sbjct: 3030 TARDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVS 3082



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   S+TVN+ D+NDN+P     P    P  ++   +   ++ +
Sbjct: 3129 KHEMTITATDGGWVARTGYCSVTVNVIDVNDNSPVF--FPDEYFPTVLENAPSGTTVIHL 3186

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A + 
Sbjct: 3187 NATDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNV 3243

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3244 PDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3293



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1696 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1752

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1753 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1809

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1810 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1839



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEAR 67
            LDR+      +   V+A +K   A S    + V + DINDN P  +  +  ++I      
Sbjct: 2080 LDRE--EVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFVQALYKVEINENTLT 2137

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   YS
Sbjct: 2138 GTDIIQVYAADGDEGTNGQVRYGI--VDGNANQEFRIDSVTGAI-TVAKPLDREKTPTYS 2194

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2195 LTVQATDRGSNPRTDTSTVSIVLLDINDFVPMFELSPYSVNVPE 2238



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V L D+ND  P         +   E      +++ + ATD DLG N  + +S+   + 
Sbjct: 568 LVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLRATDRDLGDNGTVRFSLQE-AE 626

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
           T    FR+DP SG + T   L   EQ  YS+ V ATD G   +SS   + VS++   N  
Sbjct: 627 TDQRSFRLDPVSGRLSTVTSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLL-DMNDN 685

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
           SPVF    Y  ++ E     S + T++ +
Sbjct: 686 SPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R+I+ + A 
Sbjct: 2604 KYVIWIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAM 2663

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    H F I+  +G I +   L   +  QY +T++++D G  
Sbjct: 2664 DKDSGPNGQLDYEI--VNGNKEHSFTINHATGEIRSIRSLDREKISQYVLTIKSSDKGSP 2721

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +   V E + +  TV  +T S
Sbjct: 2722 SQSTSVKVIINILDENDNAPRFSQ-IFSAYVPENSPLGYTVTRVTTS 2767



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 17/164 (10%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  +  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEIVAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            D G  + S + +    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 970  DMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 1013



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 17/126 (13%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLG 81
            E   ++ASV V++T    D+NDN PR    P     P     G     +  +  TD D+G
Sbjct: 2414 EPLSSSASVLVTVT----DVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIG 2466

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTI 139
             N+E+ YS+   S     KF IDP  G I   G L    + + +V   D G   K+  T 
Sbjct: 2467 PNSELHYSL---SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTT 2523

Query: 140  VEVSVV 145
            V V  V
Sbjct: 2524 VTVRFV 2529



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 11/179 (6%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QA 63
            S  +LDR+     ++   + + +K   + S  V + +N+ D NDNAPR   I    + + 
Sbjct: 2697 SIRSLDRE--KISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAYVPEN 2754

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQ 121
                  + ++  +D D+GVNA    S Y +++T L  F I+P +G I  +  L     ++
Sbjct: 2755 SPLGYTVTRVTTSDEDIGVNA---ISRYSITDTSL-PFTINPSTGDIVISRPLNREDTDR 2810

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y I V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2811 YRIRVSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2867



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 69/156 (44%), Gaps = 32/156 (20%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-------EQYSITVQATDTGGK 134
           +NA + YSI  VS  GL  F I   SG++ TTG  +AG        Q  + + A D G  
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLV-TTG--VAGGLDRELASQIVLNISARDQGVH 560

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
              +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 561 PKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIQGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3253 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3310

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A ++G      I EV+V   V   N 
Sbjct: 3311 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNSGSIRGADIDEVTVNVTVLDAND 3370

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P+F  N Y V +SEG    + V  ++
Sbjct: 3371 -PPIFSLNIYSVQISEGVPTGTHVTFVS 3397



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 20/193 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYSIYHVS-NTGLHKF-------RIDPRSGVIETTGK 115
             R    + K+ A D D G N E+ YS   V  +  LH         R   R  ++   G 
Sbjct: 1113 QRAGSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQRGT 1172

Query: 116  LIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+  +
Sbjct: 1173 AV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANLT 1227

Query: 173  TVATITVSRLASG 185
             V  ++ S +  G
Sbjct: 1228 QVLRVSASDVDEG 1240



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 8/166 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEIVASDMGVPQLSSSFILTVYVHDVNDNPPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V V+V+    N   P+F    Y     E     S V  +
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKV 1122



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 18/183 (9%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAG 64
            ++LDR+      F   + A +    A +   ++ V ++D+NDN P     M      +  
Sbjct: 2288 QSLDRETKE--HFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKMYFTTIPEDA 2345

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
                 ++ + A+D D   NA I+Y I      G  +F I+P +G I T+  L     E Y
Sbjct: 2346 PTGTDVLLVNASDADASTNAVISYRII----GGNSQFTINPSTGQIITSALLDRETKENY 2401

Query: 123  SITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ V ++D G       S+  +V V+ V   N   P FQ + Y  ++       S V  +
Sbjct: 2402 TLVVVSSDAGSPEPLSSSASVLVTVTDV---NDNPPRFQHHPYVTHIPSPTPPGSFVFAV 2458

Query: 178  TVS 180
            TV+
Sbjct: 2459 TVT 2461



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500


>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
            [Cavia porcellus]
          Length = 3302

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 917  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSHYTGLVSEDAPPFTSVLQISAT 976

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 977  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1035

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1036 PLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1080



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 374 LIRTAAALDRESME--RHYLRVTAQDHGLPRLSATTMVAVTVADRNDHSPVFE-----QA 426

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNT---GLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D  +NA + Y       T       F IDPRSG+I 
Sbjct: 427 QYRETLRENVEEGYPILQLRATDGDAPLNANLHYRFVGPPATRKAAAAAFEIDPRSGLIS 486

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 487 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 546

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 547 DVRPHTVVLRVTAT 560



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 867 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 922

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 923 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVTSHYTGLVSEDAPPFTSVLQISAT 976



 Score = 46.2 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP SG+I T   L   + E++ + V
Sbjct: 334 VLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDPHSGLIRTAAALDRESMERHYLRV 393

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 394 TAQDHGLPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 448



 Score = 44.7 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
           +LDR+      + F V AR+      S   S+TV + D+NDN P         ++  E  
Sbjct: 703 SLDRESVE--HYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEF-TTKEYHLRLNEDA 759

Query: 66  -ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQ 121
                +V + A D D   N  I+Y I        ++F I  + GV   T  L      E+
Sbjct: 760 AVGTSVVSVTAVDRD--ANNAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQER 815

Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           Y   V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 816 YFKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 873



 Score = 43.5 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 516 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANGLVHYN 573

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--------GKSSQTI 139
           I  +S      F ID  +G I+    L   A  +Y + ++A D G        G +S  +
Sbjct: 574 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQV 631

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V++      N  +P+F    + V+V E A +  +V  I
Sbjct: 632 VDI------NDHTPIFVSTPFQVSVLENAPLGHSVIHI 663



 Score = 43.1 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1040 PVSIQVIVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1096

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1097 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1154

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1155 NSPVLNNFQILFNNYVSNRSD 1175


>gi|156399381|ref|XP_001638480.1| predicted protein [Nematostella vectensis]
 gi|156225601|gb|EDO46417.1| predicted protein [Nematostella vectensis]
          Length = 3766

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 17/177 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEAT 76
            F F V+A++   T ++    + +N+ DINDN PR P  +      +   A   ++ ++A 
Sbjct: 2117 FSFNVLAKDGVHTGSAY---IEINVTDINDNQPRFPNSLYVGYVEENKAAGTSVMYVQAH 2173

Query: 77   DND---LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQAT 129
            D+D   LG NAEI Y++    N G  KF+ID  + ++ TT +++  E     ++ITV AT
Sbjct: 2174 DDDDPYLGGNAEIRYTL--TDNAG-GKFKIDANTALV-TTEEILDRETSPNSFTITVLAT 2229

Query: 130  DTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  K S T V    V   N  +PVF +  +   VSE       V +++ +   +G
Sbjct: 2230 DQGANKLSTTKVATIYVTDANDHAPVFTKRIFRGTVSEDVRPGYVVTSVSATDTDTG 2286



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 20/196 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LV ++E LDR+  +P  F   V+A ++     S     T+ + D ND+AP        +I
Sbjct: 2206 LVTTEEILDRET-SPNSFTITVLATDQGANKLSTTKVATIYVTDANDHAPVFTK----RI 2260

Query: 62   QAGEARRQI------VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              G     +        + ATD D G NAE+ + + H +      F +DP  G +  +G 
Sbjct: 2261 FRGTVSEDVRPGYVVTSVSATDTDTGPNAELEFVVTHGNEPA--AFYVDPSKGTVHVSGI 2318

Query: 116  L--IAGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            L     + Y++TV  +D G      +S   V +++    N  +P+F  N Y+  V+E  +
Sbjct: 2319 LNYTLRKSYNLTVTVSDRGMPVLSDNSPAYVLITITDA-NDNAPIFIPNQYNKTVAEDLA 2377

Query: 170  INSTVATITVSRLASG 185
            + S V  +T     SG
Sbjct: 2378 VGSPVVVVTAVDYDSG 2393



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 21/185 (11%)

Query: 18   KFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-----ARRQI 70
            KF F +   +K   G  A+  V +TV      D     P+       A +         +
Sbjct: 854  KFTFDMKVTDKNFPGMFATTKVEVTVT-----DTNTYTPVFSRTSFWASKPDTLPTDTSV 908

Query: 71   VKIEATDNDLGVNAEITYSIYHVS-----NTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
            +++   D D+G   E+TY +   +      +G  +FR+D  SG+IE+T  L A   Y + 
Sbjct: 909  MQLPIIDKDMGSLGEVTYQLIDPTVSAGETSGYDRFRVD-DSGMIESTNILTANTLYKLQ 967

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPV-FQQNTYDVNVSEGASINSTV--ATITVSRL 182
             +A D G  + +  V+V +   P++ +PV F QN Y  +++E + +N+ V  AT T S  
Sbjct: 968  AKAKDGGSPALEATVDVFISVYPSSDTPVRFSQNPYSASIAENSPLNTEVFRATATKSGS 1027

Query: 183  ASGCA 187
            +SG A
Sbjct: 1028 SSGIA 1032



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 73/151 (48%), Gaps = 17/151 (11%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQ-----AGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V   V + D+NDN P L     +  Q        A   I  + A D+D G NA++T SI 
Sbjct: 1088 VECLVTVTDVNDNTP-LFTFDRVNKQFVVDNYAPANTIIATLRAVDSDEGANAQVTMSIQ 1146

Query: 92   HV--SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPG 147
                SN     F ID  S V++TT KL     Y ITV+ATD G   + S+T V V V+  
Sbjct: 1147 GTVPSNA---PFTIDTPSNVLKTTTKLSTVIDYQITVRATDKGSPPQYSETTVIVKVL-- 1201

Query: 148  PNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
             N ++ PVF Q  Y V+V E   +   V ++
Sbjct: 1202 -NIQTPPVFGQAKYTVDVQENTKVGQQVISV 1231



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 25/184 (13%)

Query: 9    LDRDPPNPGK--FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
            LD +  +PG   F+ QV A+E+     S   S+ + L D+ND+ P         +   +A
Sbjct: 1777 LDYEQLSPGDKTFKLQVRAQEENTNLYST-CSVAITLEDVNDDKPTF------DLGNYDA 1829

Query: 67   RRQ--------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            R +        ++ I+ATD D G    +TY +   S+     F ID  SG + T      
Sbjct: 1830 RVRENAPIGTTVITIKATDRDTGDAGVVTYFLKAGSD---EHFAIDVNSGTLTTKKSFDR 1886

Query: 119  GEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
              Q  +S+ V A D G   G  S+ +    +V   N   P F Q  +  +VSE A+I ++
Sbjct: 1887 EGQSLFSVIVIARDKGNNPGALSEEVAVKVLVVDENDSPPQFDQAEFQTSVSESATIGTS 1946

Query: 174  VATI 177
            +  +
Sbjct: 1947 ILEV 1950



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 14/155 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +   + A +K     S  + + V + D++D+ P+   PM      +       +  ++  
Sbjct: 543 YDLVIKAEDKATFPKSSNLYVMVKIQDVDDHFPQFTQPMYYAKAPEKSPENTFVTVVKVV 602

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG- 132
           D+DLG    ++YSI     TG   F+I P SG+I TTG +    +   Y + V AT T  
Sbjct: 603 DHDLG--ESVSYSI-----TGASSFKIVPTSGLILTTGPIDLTTEPSTYELVVTATSTNY 655

Query: 133 GKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
           G + +   +V+V     T S PVF+   Y V+V E
Sbjct: 656 GTTKRATGQVNVEITSKTESPPVFKNTPYAVSVPE 690



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 14/143 (9%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            + L DINDN P+          + +A     +V++ ATD D   N  I YSI   +  G 
Sbjct: 1388 IYLRDINDNDPKFSAASYHAKLSLDAPVLEHVVQVTATDLDTANNGRIRYSIVAGNQEG- 1446

Query: 99   HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV---VP-GPNTRS 152
              F++   +G+I     L  +A   + +T++A D+G    +  V V V   +P GP    
Sbjct: 1447 -AFQVLTDNGLIRVAKSLTTVAASSFLLTLEAADSGDPERKGSVNVQVNVFLPDGP---- 1501

Query: 153  PVFQQNTYDVNVSEGASINSTVA 175
            P F  +   VN +EG + N  VA
Sbjct: 1502 PKFVLDPVIVNATEGIAANQRVA 1524



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 25/169 (14%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR-----RQIVKIEATDNDL 80
           R  Q  A S  V+L + + D++DN    P+  P Q++   +      R I ++ ATD+D 
Sbjct: 443 RNGQSGALSASVNLKIEVLDVDDNN-NAPVFNPQQLELTVSEDSAVGRTIRRVSATDSDD 501

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATD-- 130
           G + ++ YSI  +  +GL  F++        TTG LI            Y + ++A D  
Sbjct: 502 GSDGQVVYSI--IQGSGLGVFQVQA------TTGDLIVAAPLDREKMSFYDLVIKAEDKA 553

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           T  KSS   V V  +   +   P F Q  Y     E +  N+ V  + V
Sbjct: 554 TFPKSSNLYVMVK-IQDVDDHFPQFTQPMYYAKAPEKSPENTFVTVVKV 601



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 26/152 (17%)

Query: 39   LTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            + V+L DIND++P              I +G +   I K+ ATD D G + +I+Y   + 
Sbjct: 1294 VVVSLTDINDDSPTFTKSVYEFFANEDISSGTS---IGKVAATDRDSGSHGQISYRFLYA 1350

Query: 94   SNT-GLHKFRIDPRSGVIE-TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S+   + KF +D  +G+I   +GK +  E                 TI EV + +   N 
Sbjct: 1351 SDIQSMDKFDLDQTTGIISLASGKSLDYEDI---------------TIAEVRIYLRDIND 1395

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              P F   +Y   +S  A +   V  +T + L
Sbjct: 1396 NDPKFSAASYHAKLSLDAPVLEHVVQVTATDL 1427



 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 16/164 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + +K++ DR+      F   VIAR+K     A S  V++ V + D ND+ P+       Q
Sbjct: 1878 LTTKKSFDRE--GQSLFSVIVIARDKGNNPGALSEEVAVKVLVVDENDSPPQFDQ-AEFQ 1934

Query: 61   IQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS------GVIE 111
                E+      I+++ ATD D+G NA++ Y I      G   F +   S      G ++
Sbjct: 1935 TSVSESATIGTSILEVVATDQDIGDNAKLEYFI--SGGDGRFWFAVQTISKSGRTYGEVQ 1992

Query: 112  TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               +L    + S T+  T T G+ S T   +  +   N   P+F
Sbjct: 1993 VDARLDFETKSSYTIDVTATDGRFSATTRVLITITDANDIVPMF 2036


>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
          Length = 5147

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A +    L +++ND+ND+ P         +  +    
Sbjct: 452 LDRE--EIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 509

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F +DP +G+I TTG L     +   +
Sbjct: 510 GSFVASITATDEDTGVNAQVHYDI--LSGNELKWFSMDPLTGLIVTTGPLDREIRDTVEL 567

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           ++ A D G   K + T ++V ++   N  +P F Q   +V + E A   + VA +T +  
Sbjct: 568 SISARDGGPNPKFAYTQLKV-IILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDH 626

Query: 183 ASG 185
             G
Sbjct: 627 DQG 629



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            ++  + LDR+  +  + R +V +   Q T A      T+ ++D NDN P     +    I
Sbjct: 1877 LILNDTLDRETKSKYELRIRV-SDGVQYTEAYA----TIQVSDTNDNPPLFEDTVYSFDI 1931

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ +I A D DLG NA+++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1932 PENAQRGYQVGQIVARDADLGQNAQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1989

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D G  S  T + V   V   N  +P+F   +Y   V E   I + V T+
Sbjct: 1990 VQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTV 2049

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 2050 SAKDIDSG 2057



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            + ++  LDR+    G + F V A ++     +   S+ ++L D NDN P+   +  + + 
Sbjct: 2865 IYTRMRLDRE--EIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLFSLNVT 2922

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +  E    ++++ ++D DLG NA  +YS     N G  KFRI+P+SG I   G L   +Q
Sbjct: 2923 ENAEIGSFVIRVTSSDLDLGANANASYSF--SENPG-EKFRIEPQSGNITVAGHLDREQQ 2979

Query: 122  --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              Y + V A+D G   ++T + ++ +   N  +P F+ + Y  +  E
Sbjct: 2980 DEYILKVVASD-GAWRAETPITIT-IQDQNDNAPEFEHSFYSFSFPE 3024



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT++++D+NDN P+       +  P +I  GE    +    A D D G NA + Y+I 
Sbjct: 2580 VNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEF---VFGARALDLDDGENAVVHYTI- 2635

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
              S    H F I+ ++GV+ T  +L    +      Y+I + A D G +S  +  E++V+
Sbjct: 2636 --SGRDQHYFDINTKTGVVSTKLELKTKTKSTDDLTYTIVISAMDQGEQSLSSKAELTVI 2693

Query: 146  PGPNTRSPVF 155
              P    P F
Sbjct: 2694 LRPPELFPTF 2703



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 23/158 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL-------- 53
           + ++  LDR+     ++   VIAR++   T  S   ++ +N+ D+NDN P+         
Sbjct: 659 LTTRRPLDRE--KMSQYEIPVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYS 716

Query: 54  --PMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                  I+++   E  R ++ + A+D D G NA I Y +    + G   F++D RSG I
Sbjct: 717 LTDDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRL---ESGGEGLFQLDARSGAI 773

Query: 111 ETTGKLIAG----EQYSITVQATDTGGKSSQ--TIVEV 142
              G   A       Y + V A D G + SQ   IVE+
Sbjct: 774 SLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEI 811



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            R P    + R + +A +KQ   +S  V +T+ + D+ND  P         I    A   +
Sbjct: 2126 RSPRKYQQTRQEFLAHQKQQRLSST-VKVTILIKDVNDEVPVFVSANETAIMENVAINTV 2184

Query: 71   V-KIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AGEQY 122
            V  ++A DND G N  I Y +    +  + +     F ++P  G +     L       Y
Sbjct: 2185 VIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSY 2244

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             + + A D G     T  ++ V +   N  SPVF    Y  +V+E ASI + V  ++ + 
Sbjct: 2245 LLNITARDRGEPPQSTESQLLVRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATD 2304

Query: 182  LASGC 186
            +  G 
Sbjct: 2305 VDEGA 2309



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 32/136 (23%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------------RL 53
           NLDR+  + G ++  + AR+         + + V + D+NDN P               L
Sbjct: 227 NLDRE--SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETAL 284

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
           P  P            +V + A+DNDLG N++ITY +        H+F ++P +GVI TT
Sbjct: 285 PGTP------------VVTVMASDNDLGDNSKITYYLAETE----HQFTVNPETGVISTT 328

Query: 114 GKLIAGEQYSITVQAT 129
            ++   +Q ++   A+
Sbjct: 329 ERVNCPQQTNVKSSAS 344



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 45   DINDNAPRLPMI----PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDNAP   +     P I +    A  Q + +    D D GVN+ I+YS+   +N    
Sbjct: 934  DLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL---TNNPNQ 990

Query: 100  KFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +FRI P +GV+     + A  G    + + ATD G    S  +    ++   N  +PVF 
Sbjct: 991  QFRIGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFD 1050

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASG 185
              +Y+ ++ E   +N+    +  + +  G
Sbjct: 1051 HTSYETSLPETTKVNTRFFALAATDIDLG 1079



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
            +N+ D ++N P+      + P+   A   +R IV++ A D  DLG N E+ YS+   + +
Sbjct: 3112 INIVDAHNNPPKFEQAEYLAPLPQDAVRGQR-IVRVHANDKQDLGTN-EMDYSLMTFNLS 3169

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
             +  F +    G I      ++    +Y + V+ATD G   +S +T V V VV G N  +
Sbjct: 3170 SI--FSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRV-VIVVTGENMDT 3226

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F  N+Y V V E   + ST+ T+
Sbjct: 3227 PRFSVNSYQVIVPENEPVGSTILTV 3251



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 42/200 (21%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            YL V +  LDR+  +   +   V  R+    + S  V + +++ D NDNAP+        
Sbjct: 1104 YLFV-RAPLDREERD--YYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTF 1160

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT- 113
             IP    +   A   + K+ A D D+G NAE+++++    ++    F ID R+G I+T  
Sbjct: 1161 SIP----ENAPADTFVGKLTAVDRDIGRNAELSFTL----SSQTQDFTIDTRNGFIKTLR 1212

Query: 114  --------------------GKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                                G L   +AG    +    +D G    Q  V+V V V   N
Sbjct: 1213 PFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVN 1272

Query: 150  TRSPVFQQNTYDVNVSEGAS 169
              +P F +  Y V +SEGAS
Sbjct: 1273 DNAPEFLRAPYHVTISEGAS 1292



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSI 90
           + P+ + + + D+NDN+P  P  P I I   E+     ++    ATD D+G N  +T   
Sbjct: 137 TYPIEVRIKVLDVNDNSPEFPE-PSIAISFSESATSGTRLLLDAATDADVGENG-VTDQY 194

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ETTG L    +  Y + + A D G       +
Sbjct: 195 EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYL 254

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y+V+++E A   + V T+  S
Sbjct: 255 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 295



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 20/160 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++     S    L V + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2244 YLLNITARDRGEPPQSTESQLLVRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2300

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             ATD D G N  I YSI  V     H F I   +GV+     L      +YS+TV+A D 
Sbjct: 2301 SATDVDEGANGRIRYSI--VLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDC 2358

Query: 132  -----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                  G +++  + +  +   N   P F  + Y   V E
Sbjct: 2359 ALENPAGDTAELTINILDI---NDNRPTFLDSPYLARVME 2395



 Score = 43.1 bits (100), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 19/137 (13%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVNAEITYSIYHVS 94
            V + DINDN P    +  +Q      R        ++   ATD D G+NA++ +++    
Sbjct: 2479 VEVQDINDNDP----VFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLL--- 2531

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---TGGKSSQTIVEVSVVPGPN 149
               +H+F ID  +G I T   L   E   Y +T+ A D   T  ++S   + +S V   N
Sbjct: 2532 GEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTIS-VSDVN 2590

Query: 150  TRSPVFQQNTYDVNVSE 166
               P F   TY+V V E
Sbjct: 2591 DNIPKFDSTTYNVAVPE 2607



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  ++A+D D G N  +   IY + N 
Sbjct: 2796 ITLNVTDANDNAPVMEQLIYTAEVLEEESPPQLIAVVKASDRDSGDNGNV---IYRLQND 2852

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I T  +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2853 FDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPP 2911

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             F +  + +NV+E A I S V  +T S L  G 
Sbjct: 2912 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLGA 2943



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 23/185 (12%)

Query: 19   FRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQI 70
            FR  V+A ++   +    S    +TV + DINDNAP        ++PP    +  +   +
Sbjct: 1564 FRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAV 1623

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT-GKLIAGE-QYSITVQ 127
            +++ A D D   N  +TY I     +G  + F++   +G+I  T G     E +Y +T++
Sbjct: 1624 MQVHAKDADSSSNGLVTYEIV----SGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLK 1679

Query: 128  ATDTGGKSSQTIVEVS---VVPG---PNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
            +TD   +S +   EV    + PG     +  P F+Q +    +V E   I +++ T+T +
Sbjct: 1680 STDEAVQSERRSSEVYITIITPGSGESESSVPQFEQRSKLSGSVYENEPIGTSILTVT-A 1738

Query: 181  RLASG 185
             LAS 
Sbjct: 1739 HLASA 1743



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 83   NAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG- 133
            +AEI Y + +V+  G        F ID + G++ T  +L   AG E+Y + V A   GG 
Sbjct: 1742 SAEIEYFVTNVTAVGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQ 1801

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++S+T V V+V+   N   P F    +  NVSE   I  T++T+
Sbjct: 1802 PRTSRTKVRVTVL-DKNDSPPQFLDTPFVYNVSEDLQIGHTISTL 1845



 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            S   S+T+ + D NDNAP           ++      ++++   +D D GVN+++ +SI 
Sbjct: 1365 STNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRGSDADQGVNSQVVFSI- 1423

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +      F ID  +G +     L   +   Y++ + A+D G  S  T V  +V V   
Sbjct: 1424 -SAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDD 1482

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   P+F        + EG  + + + T+T     SG
Sbjct: 1483 NDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSG 1519



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +   + ATD DLG N  I+Y I  +       F + P  G +     L   E+  Y++TV
Sbjct: 1067 RFFALAATDIDLGDNGRISYEI--IEGNTERMFGVFP-DGYLFVRAPLDREERDYYALTV 1123

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               D G  S  ++V V + V   N  +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1124 SCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1176


>gi|395510863|ref|XP_003759687.1| PREDICTED: cadherin-18-like [Sarcophilus harrisii]
          Length = 790

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 17/159 (10%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             + + DINDNAP+    P     P     G +  Q+   +A D   G +A + YSI   
Sbjct: 145 FIIKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ- 203

Query: 94  SNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATD----TGGKSSQTIVEVSVVP 146
              G   F +DP++GVI T    +   A E YS+ +QA D     GG S  T V ++ + 
Sbjct: 204 ---GQPYFSVDPKTGVIRTALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNIT-LS 259

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N   P F Q  Y + V E A + S V  I  +   +G
Sbjct: 260 DVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTG 298



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)

Query: 7   ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
            N+DR+     +  + V+  A++  G    +  S TVN  L+D+NDN PR P     +  
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLSDVNDNPPRFPQKHYQLYV 277

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
           P   Q G A   + KI+A D D G NAE+ Y+I +    G+     D   R G++     
Sbjct: 278 PESAQVGSA---VGKIKANDADTGTNAEMKYTIINGDGIGVFSISTDKETREGILSLKKP 334

Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           L           I G    +  + +  G     T++++ V  G     P+F   +Y ++V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDVTMLKIIV--GDVDEPPLFSMPSYVMDV 392

Query: 165 SEGASINSTVATI 177
            E   I + V T+
Sbjct: 393 HENEKIGTVVGTV 405


>gi|269995999|ref|NP_001019303.2| protocadherin beta-8 precursor [Pan troglodytes]
          Length = 801

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  + Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRAQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E       +VK+ ATD D GVN EI+YS++  S+     F +D  +G I    +L   
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFTVDFLTGEIRLKKQLDFE 311

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377


>gi|327269193|ref|XP_003219379.1| PREDICTED: protocadherin Fat 3-like [Anolis carolinensis]
          Length = 4553

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V L + + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1234 VWLVIQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAVDKDEGPNAEISYSIV 1292

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1293 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1350

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1351 PSPVPLTFDEPFYNFTVMESDRVTEIVGVVSV 1382



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2548 IITTEKLDREIPLEGDI--TIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2605

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   +  +V +++A D D G NA I YS+Y  ++  +     IDP +G + T G    +
Sbjct: 2606 KADVGKGHLVTQVQAVDPDDGANARIAYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2665

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P T  P F Q  Y   +SE   I ST+ 
Sbjct: 2666 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETILPSFSQPQYSFTMSEDTVIGSTID 2724

Query: 176  TITV 179
             + V
Sbjct: 2725 ALHV 2728



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 15/156 (9%)

Query: 38   SLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            ++T+ + DINDN P       L  +P    +      +I+ + AT  D+G NAEITY I 
Sbjct: 3217 TVTITVLDINDNPPVFERRDYLVTVP----EDTSPSAEILSVFATSKDIGTNAEITYLIR 3272

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +  G  KFRI+ R+G I     L     + + + ++A D G  +   +  V++ V   
Sbjct: 3273 SGNEKG--KFRINSRTGSIYVIEHLDYETCKDFFLIIEAKDGGSPALSAVTTVNINVTDV 3330

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            N  +P F Q  Y   +SE AS+  ++ T+    L S
Sbjct: 3331 NDNAPRFSQEVYSAVISEDASVGDSLITLIAEDLDS 3366



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 8/144 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V + D+NDN P    +  I I   +    + I+++ A D D+G N EI YS+Y    
Sbjct: 3010 AVEVIVTDVNDNNPVCDQVTYIAIFPEDIPPNKVILQMGAKDADIGSNGEIRYSLY---G 3066

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            +G +KF +DP SG ++T   L   +   Y++  +ATD GG+  Q+ + + ++   N   P
Sbjct: 3067 SGNNKFYLDPESGELKTLAPLDREKIPVYNLIARATDGGGRFCQSEIHL-ILEDVNDNPP 3125

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            +F  + Y   V E  +  + +  +
Sbjct: 3126 MFSSDHYTACVYENTATKALLTRV 3149



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 11/173 (6%)

Query: 10   DRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            D D      F F V  R+    Q TA + PV +T+++ D+NDN P     M   + +   
Sbjct: 1834 DLDHETIAHFHFHVHVRDSGNPQLTAEN-PVEVTIDVTDVNDNPPVFSQAMFETVLLLPS 1892

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI 124
                +++K+ A D D  V  E+TYS+       +  F IDP SG++      +  + Y +
Sbjct: 1893 YVGVEVLKVRAADPDSEVPTEMTYSLIE---GNMEYFLIDPFSGIVTIKNNSLTKDHYML 1949

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + +D  GK   T V   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1950 IAKVSD--GKFYSTAVVTIMVKEAMDSGLHFTQSLYSTSISENSTNITKVAVV 2000



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 13/169 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLP--MIPPIQIQAGEARRQIVKIEAT 76
            F +I   K G + ++    TVN+N  D+NDNAPR    +   +  +       ++ + A 
Sbjct: 3303 FFLIIEAKDGGSPALSAVTTVNINVTDVNDNAPRFSQEVYSAVISEDASVGDSLITLIAE 3362

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG 132
            D D   N +I +SI  ++    ++F IDP  G+I+   +L    I+G  YS+ +QA D+G
Sbjct: 3363 DLDSPPNGQIHFSI--INGDRNNEFSIDPSLGLIKVKKRLDRERISG--YSLVIQARDSG 3418

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              S    V V+V +   N  SPVF    Y   + E   I +++  + V+
Sbjct: 3419 IPSLSASVTVNVDISDVNDNSPVFTPANYTAVIQENKPIGTSILQLVVT 3467



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1513 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDSNDHSPYFTSPLYEAS 1570

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  L 
Sbjct: 1571 VFESAAIGSAVLQVTALDKDKGENAELIYTI-ESGNTG-NTFKIEPVLGIITVLKEPDLT 1628

Query: 118  AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A  Q+ ++V+ +D G    S+  IV +SV    N+  P F    +   V+E     ++V 
Sbjct: 1629 AMNQFVLSVKVSDQGSPPLSATAIVRISVTMSDNSH-PKFTHKEWQAEVNENVDFGTSVI 1687

Query: 176  TIT 178
             ++
Sbjct: 1688 LVS 1690



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 10/143 (6%)

Query: 45   DINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH--VSNTGLHK 100
            DINDN P         I ++      ++V+++ATD D G N ++TYS+     ++     
Sbjct: 2802 DINDNKPVFESASYEAIIMEGMPIGTKLVQVKATDADWGANGQVTYSLLAEVEADRITEV 2861

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVF 155
            F ID  SG I T   L       +S TV ++D G     SS T++ V+V    N  +PVF
Sbjct: 2862 FTIDSNSGWISTLKDLDHERNPTFSFTVVSSDLGETLSLSSTTLISVTVT-DINDNAPVF 2920

Query: 156  QQNTYDVNVSEGASINSTVATIT 178
            + + Y   V E  S    VA ++
Sbjct: 2921 EHDMYRGTVKESDSPGEVVAVLS 2943



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 19/150 (12%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           LT+ + D NDN P   +     +   E+     +I+++EA D DLG N E+TYSI     
Sbjct: 813 LTITVEDANDNRPEF-LQESYSVNIFESTSIGVEIIQVEARDRDLGSNGEVTYSIL---- 867

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP------G 147
           T   +F I+  +G+I     L       Y++ ++A D      Q   + SVVP       
Sbjct: 868 TDTQQFVINSSTGIIYVADHLDREFKANYTLKIEARDRAENGQQ---QFSVVPLKVFLDD 924

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            N  SP F   +Y V V E   + + +A +
Sbjct: 925 VNDCSPAFIPPSYSVKVLEDLPVGTVIAWL 954



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++A D 
Sbjct: 3095 YNLIARATDGGGRFCQSEIHLILEDVNDNPPMFSSDHYTACVYENTATKALLTRVQANDP 3154

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+GVN +I YS+   S+ G   F +D  SG+I     L    Q  Y++T++A+D G    
Sbjct: 3155 DVGVNRKIVYSLAD-SSEGF--FSVDKSSGIIILEHPLDRELQPSYNVTIKASDQGIVQT 3211

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS   V ++V+   N   PVF++  Y V V E  S ++ + ++
Sbjct: 3212 LSSFATVTITVL-DINDNPPVFERRDYLVTVPEDTSPSAEILSV 3254



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 15/187 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQ 60
            ++   ++LDR+       + +   R + G      V L V L+D+ND +P    IPP   
Sbjct: 881  IIYVADHLDREFKANYTLKIEARDRAENGQQQFSVVPLKVFLDDVNDCSPAF--IPPSYS 938

Query: 61   IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            ++  E       I  +E  D DLG+  ++ YS+ +  N    KF ID  SG I  + +L 
Sbjct: 939  VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---KFEIDKASGAIRLSKELD 995

Query: 118  AGEQ--YSITVQATDTGGKSS----QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +Q  Y++TV+A D G   S      +    V    N  +P F       +V E A I 
Sbjct: 996  YEKQQFYNLTVRAKDKGRPVSLSSVSFVEVEVVDVNENLYTPYFSDFAVIGSVKENARIG 1055

Query: 172  STVATIT 178
            ++V  +T
Sbjct: 1056 TSVLQVT 1062



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 12/165 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            +   V A  +Q       V + V++ DINDN+P    LP    +Q++A +    I ++ A
Sbjct: 2046 YELVVEASREQDHLRVARVVVKVHIEDINDNSPVFVGLPYYAAVQVEA-DPGALIYRVTA 2104

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
             D D G N ++ Y +          F ID ++G +         ++  +Y I V A D G
Sbjct: 2105 IDKDKGANGDVAYLL----KEDYGHFEIDRQTGSVTLKAAFNSDLSNIEYLIIVIAKDGG 2160

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              S    VE+ +    N   PVF +  Y   V+E   +++ + +I
Sbjct: 2161 NPSLSASVELPITI-VNKAMPVFDKPFYTATVNEDIEMHTPILSI 2204



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I+++EA D D     +++Y ++  + +  + K
Sbjct: 1448 DNNDNGPEFSQ-PSYDVTISEDILPDTEILQVEAIDRD--EKHKLSYIVHSSIDSVSMRK 1504

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1505 FRIDPNTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDSNDHSPYFTS 1564

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A+I S V  +T
Sbjct: 1565 PLYEASVFESAAIGSAVLQVT 1585



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 8/167 (4%)

Query: 21   FQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATD 77
            F++  R     T A   V++ + +ND+NDNAP            +       ++++ ATD
Sbjct: 2250 FKLTVRASDALTGARAEVTVDLIINDMNDNAPVFEHFAYNATLSEGSLIGTPVLQVIATD 2309

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK 134
             D   N  I Y I   +      F ID  SG+I  T +L+  E   Q  + V+ATD G  
Sbjct: 2310 ADSENNKIIQYQIVQDTFNSTDYFHIDGSSGLI-LTARLLDHELMQQCILKVRATDNGFP 2368

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               + V VS+ V   N   P+F Q  Y+  VSE A     V  +  S
Sbjct: 2369 PLSSEVLVSIFVTDMNDNPPIFNQLIYESYVSELAPRGHFVTCVQAS 2415



 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D+D G + EI YS+     +GL +F ID  +GVI T   L     + Y +TV 
Sbjct: 1058 VLQVTARDDDNGRDGEIQYSVR--DGSGLGRFNIDEETGVIYTADILDRETTQSYWLTVY 1115

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD G     T +EV + V   N  +P+  +  Y  +V E +  + +V  I
Sbjct: 1116 ATDRGVVPLFTTIEVYIEVEDVNDNAPLTSEPIYYPSVMENSPKDVSVIQI 1166



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
           VI    +G        + V + D+ND  P   P    + I ++   R  I ++ ATD D+
Sbjct: 124 VIKGSVRGEDLEAWTKVNVQVLDMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADI 183

Query: 81  GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           G N E     Y+     +  F + P SGVI  +G+L   E+  Y + V A D G K
Sbjct: 184 GSNGE----FYYYFKNKVELFAVHPTSGVISLSGRLNYDEKNRYDLEVLAVDRGMK 235



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI T+ K +  E    Y +TVQAT+  G +S   V + +V   N   P+F  
Sbjct: 1710 FAINPYSGVI-TSQKPLDYELMSSYQLTVQATNMAGMASNATVNIQIV-DENDNPPIFLF 1767

Query: 158  NTYDVNVSEGASINSTVATI 177
              Y   +SE A +NS V ++
Sbjct: 1768 LKYSGRISEAAPVNSIVRSL 1787



 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ ++ATD D G+  +I+YSI  +++    +F ID  +G I TT KL     + G+  +
Sbjct: 2510 KVIHVKATDGDAGIYGQISYSI--INDFAKDRFLID-NNGQIITTEKLDREIPLEGD-IT 2565

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2566 IFLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2605



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +TV + D ND+ P    P       ++      I+ + A D D G N  ITYSI  +++ 
Sbjct: 454 VTVRIEDANDHIPEFTQPSYSSYVNESVPVGTTILSVSAFDKDRGENGYITYSIASLNSL 513

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
               F I+  +G+I T+ +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 514 ---PFSINQFTGIISTSEELDFESSPESYRFIVRASDWGSPYRHESEVNVTIYIGNVNDN 570

Query: 152 SPVFQQ 157
            P+F++
Sbjct: 571 KPLFEK 576



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 34   SVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIY 91
            S  V +++ + D+NDN P    +I    +     R   V  ++A+D D      + YSI 
Sbjct: 2371 SSEVLVSIFVTDMNDNPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSI- 2429

Query: 92   HVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
             +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + ++ G N
Sbjct: 2430 -LSGNDRTSFVMDSKSGVITLSNHRKQRMESLYSLNVSVSD-GLFTSTAQVHIRIL-GAN 2486

Query: 150  TRSPVFQQNTYDVNVSEGA 168
              SPVF Q+ Y   V E +
Sbjct: 2487 LFSPVFSQSIYVAEVRENS 2505



 Score = 36.2 bits (82), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 14/154 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ + E LD +  +P  +RF V A +          V++T+ + ++NDN P    +    
Sbjct: 523 IISTSEELDFES-SPESYRFIVRASDWGSPYRHESEVNVTIYIGNVNDNKPLFEKVACQG 581

Query: 61  IQAGE--ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
           + + E      I  + A D D     E+    Y  +S   L  F ++P SGV++    L+
Sbjct: 582 MISSEFPVGGHITAVSAIDID-----ELELVKYKIISGNELGFFYLNPDSGVLQLKKSLV 636

Query: 118 AG----EQYSITVQATDTGGKSSQTIVEVSVVPG 147
           +G      + + + ATD    +    V +SVV G
Sbjct: 637 SGGVKNNNFGLRITATDGENFADSMFVNISVVHG 670


>gi|7407146|gb|AAF61929.1|AF231023_1 protocadherin Flamingo 1 [Homo sapiens]
          Length = 3312

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 927  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 987  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1045

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 384 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 436

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 557 DVRPHTVVLRVTAT 570



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLL----EDN 900

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 404 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 458



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 722 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 780

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 781 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 836

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 837 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPMGSTIVVISAS 883



 Score = 43.5 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1050 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1164

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185



 Score = 42.7 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 642 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 673


>gi|348508893|ref|XP_003441987.1| PREDICTED: protocadherin-15 [Oreochromis niloticus]
          Length = 2302

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-----IQIQAGEARRQIVKI 73
           + F ++A +  G   S  V++ + + D NDN P  P +       I +  GEA   ++++
Sbjct: 524 YTFTLVASD--GVQESTAVTVAITVLDANDNTPTFPNVSYNVNLFIDMMPGEA---VLQL 578

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDT 131
            A D+D G N  ITY I    + G   F I   SG+I      +L  G+ Y++TV+A D 
Sbjct: 579 SAFDSDAGQNGLITYRIL-AGHQG--HFVIGNSSGIITVAPGVELSVGQSYALTVEAMDN 635

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           G     +SS T V + V+P  N   P F +  Y++ +SE     +T+  +
Sbjct: 636 GPEPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNLEISEAMRTGATLLNL 685



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 18/175 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YLV+ K  LDR+  +             +GT+ +   ++ + + D+NDN P      P+ 
Sbjct: 716 YLVLDKP-LDRETLDYYTLVVTASDGHPEGTSTA---TVNIVVTDVNDNDPLFNTSLPVN 771

Query: 61  IQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
           +   E +    + +++ATD DLG + ++ Y +  V++ GL  F I+  +G I T   L  
Sbjct: 772 LTVIEEQNHAYVGQVKATDPDLGASGQVHYRL--VNHQGL--FSINA-TGAITTAVPLDR 826

Query: 117 -IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + G  Y +TV+A D     + S+  + V+V+   +  SP+F Q TY+VN+ E +
Sbjct: 827 EVKG-HYYLTVEAWDGAENPRRSRLTLHVTVL-DVDDNSPIFTQQTYNVNLPENS 879


>gi|345328407|ref|XP_001512164.2| PREDICTED: protocadherin-11 X-linked-like [Ornithorhynchus
           anatinus]
          Length = 1088

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 8/173 (4%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
           ++  +++A +      +    L + + D NDNAP    P+I     +      Q+ KI A
Sbjct: 419 EYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPVIGLSIPENNAPGTQLTKISA 478

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G NAEI+Y +    +     F +D R+GV+    +L   +Q  YS TV A D G 
Sbjct: 479 TDADGGRNAEISYML---GSDAPPIFNLDRRTGVLTAVRRLDREKQDRYSFTVLARDNGI 535

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              Q    V+V V   N  SP F  N Y+  V E   +  TV  ITV+   +G
Sbjct: 536 PPLQANATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAG 588



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 20/157 (12%)

Query: 39  LTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY- 91
           L V + D+NDN P          IP    +       + ++ ATD DLG NA+I +S   
Sbjct: 223 LQVTVTDVNDNRPVFKENDIEVSIP----ENAPVGTSVSQLHATDADLGANAQIRFSFSN 278

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV----- 144
            +S+     F ID  +G+I T   L   E   + +TV A+D     S+  V V+V     
Sbjct: 279 QISSLAKRLFAIDNATGLITTKDVLDREEAPTHKLTVLASDGSSTPSRATVTVNVTDVND 338

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            VP  +TR  +   N   V +SE A IN+ +A ITV+
Sbjct: 339 NVPSIDTRYIINPTNG-TVLLSEKAPINTKIALITVT 374



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D    G + FQV A +      S    +T+N+ D+NDN P   ++P      
Sbjct: 612 VIRPNITFDREQQGSYTFQVKAVDAGRLQRSSTAKVTINVVDVNDNRPVF-VVPSSNYSY 670

Query: 59  --IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             +   AG     + K+ A DND G+NAE+ YSI   ++ GL  F I+  +G +    K+
Sbjct: 671 DLVPTTAGPGS-VVTKVFAVDNDTGMNAELRYSIVGGNSRGL--FAINQLTGNVTLKEKV 727

Query: 117 IAGEQ--YSITVQATDTGGKSS 136
           I+ +   + + V+  D G   S
Sbjct: 728 ISADHGLHRLVVKVNDLGQPES 749



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 35/164 (21%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------------RLPM 55
           LDR+  +  ++ F V+AR+          ++TV++ D NDN+P              LPM
Sbjct: 516 LDREKQD--RYSFTVLARDNGIPPLQANATVTVSVLDQNDNSPAFTHNEYNFYVPENLPM 573

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              + +           I  TD D G NA +T SI +    G   F IDP +GVI     
Sbjct: 574 YGTVGL-----------ITVTDADAGENAAVTLSILN----GRDHFIIDPLTGVIRPNIT 618

Query: 116 LIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVF 155
               +Q  Y+  V+A D G   +SS   V ++VV   N   PVF
Sbjct: 619 FDREQQGSYTFQVKAVDAGRLQRSSTAKVTINVV-DVNDNRPVF 661



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+ +K+ LDR+       +  V+A +  G++     ++TVN+ D+NDN P +    +I P
Sbjct: 296 LITTKDVLDRE--EAPTHKLTVLASD--GSSTPSRATVTVNVTDVNDNVPSIDTRYIINP 351

Query: 59  -----IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
                +  +      +I  I  TD D  +N ++T    H        FR+ P      ++
Sbjct: 352 TNGTVLLSEKAPINTKIALITVTDKDADLNGKVTCFTDHDV-----PFRLKPVFDNQFLL 406

Query: 111 ETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           ET   L   A  +Y+I + A+D+G    +Q+ + +  +   N  +PVF Q    +++ E 
Sbjct: 407 ETATYLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPVIGLSIPEN 466

Query: 168 ASINSTVATITVSRLASG 185
            +  + +  I+ +    G
Sbjct: 467 NAPGTQLTKISATDADGG 484


>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
            porcellus]
          Length = 4819

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   A     ++TVN+ D NDNAP+        P+   ++ G    +
Sbjct: 2947 NINRHSFIVTSSDRGNPALLSETTVTVNIVDSNDNAPQFLSDKYFTPVTKNVKVG---TK 3003

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + +  G  KF++D  +G I     LI+   + + ITV
Sbjct: 3004 LIKVTAVDDKDFGLNSEVQYFISNENYLG--KFKLDSDTGWISVASSLISDLNQNFLITV 3061

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V+++V    N  +P F Q+     + E  SI + V T++
Sbjct: 3062 TAKDKGNPPLSSQATVQITVTE-ENYHTPEFSQSHMSATIPESHSIGTIVRTVS 3114



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E      Q++++
Sbjct: 1175 FTFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISETAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGKNGLIHYSV--IKGNEERQFAIDSTSGQVTLIGKLDYEATPTYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 12/181 (6%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGE- 65
           +LDR+      +   V+A +      S    + V+L D+NDN+P   P+     IQ  E 
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSVTHINVSLLDMNDNSPVFYPVQYFAHIQENEP 703

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               I  + ATD DLG+N  + YSI   S     +F+I+ +SGVI T   L   E+  Y 
Sbjct: 704 GGSYITTVSATDPDLGLNGTVRYSI---SAGDRSRFQINAQSGVISTRIALDREEKTAYQ 760

Query: 124 ITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
           + + ATD G   S  Q IV V+V+   +   PVF Q  Y   V E  ++   V +++ S 
Sbjct: 761 LQIVATDGGNLQSPNQAIVTVTVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVSASS 819

Query: 182 L 182
           +
Sbjct: 820 M 820



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATKRLDRER----RSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L    
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLTRILDYET 1908

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   S+T+N+ D+NDN+P    +P    P  ++   +   ++ +
Sbjct: 3161 KHEITIRATDGGWVARTGYCSVTINVIDVNDNSPVF--VPDEYFPTVLENAPSGTTVIHL 3218

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I YSI   S++ L  F IDP +G+I T G L     + Y +TV+A + 
Sbjct: 3219 NATDVDSGTNAVIAYSI-QSSDSDL--FVIDPNTGIITTQGFLDFETKQSYHLTVKAFNV 3275

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3276 PDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3325



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E   A  +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENSPAGTELLVLGATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + +    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-TESDQRLFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S T + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SVTHINVSLL-DMNDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  +V   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDTV---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFSINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S +++    V   N   PVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 976  LSSSVILTVYVYDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 87/203 (42%), Gaps = 32/203 (15%)

Query: 3   VVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +VSK  LDR+  PN   ++  V   +K        + + V + DINDN P   +      
Sbjct: 202 LVSKGGLDREVTPN---YQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHY 255

Query: 62  QAGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           Q G     +V     ++ A D D G NA+I Y +          F +DP +G+I     L
Sbjct: 256 QXGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFHMDPETGLITVREPL 311

Query: 117 I--AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNV 164
              A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V
Sbjct: 312 DFEARRQYSLTVQAVDRGVPSLIGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASV 367

Query: 165 SEGASINSTVATITVSRLASGCA 187
            E A + + VA +TV+   S  A
Sbjct: 368 DENAQVGTVVALLTVTDADSPAA 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K     S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQALYKVEINEDTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDILQVFAADGDEGTNGQVRYGI--VDGNTNQEFRIDSVTGAI-TVAKPLDREKIATYL 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQA D G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2227 LTVQAADRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2270



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 11/172 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    +       
Sbjct: 2733 LDRE--KVSHYMLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVPENSPLG 2790

Query: 69   QIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
             IV ++  +D D+G NA   YS+   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2791 YIVTRVTTSDEDIGANAVSRYSLMDTS----LPFTINPNTGDIIISRPLNREDTDRYRIR 2846

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V A D+G   S  +     V   N  +P F + +Y ++  E A I S V  +
Sbjct: 2847 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRPSYYLDCPELAEIGSKVTQV 2896



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D D+G + E+ Y I+   N
Sbjct: 3285 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDMGTDGEVHYLIF--GN 3342

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ R+G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3343 SRKKGFQINKRTGQIYVSGLLDREKEERISLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3402

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3403 -PPVFSLNIYSVQISEGVPIGTHVTFVS 3429



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R+I+ + A 
Sbjct: 2636 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPRKILTVSAV 2695

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2696 DKDSGPNGQLDYEI--VNGNKENSFSINHATGEIRSIRPLDREKVSHYMLTIKSSDKGSP 2753

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +   V  +T S
Sbjct: 2754 SQSTSVKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYIVTRVTTS 2799



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N  +  F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDIDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFSQPKYITILKEGEPIGTNVISI 1651



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 8/166 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV + D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVYDVNDNPPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTISE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V V+V+    N   P+F    Y     E     S V  +
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKV 1122



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 45   DINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDN PR    P     P     G     +  +  TD D+G ++E+ YS+   S     
Sbjct: 2460 DVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPHSELHYSL---SGRNSE 2513

Query: 100  KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
            KF IDP  G I   G L    + + +V   D G   K+  T V V  V
Sbjct: 2514 KFHIDPMRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFV 2561



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYSIYHVSN-----------TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS   V             T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAITGEITSTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    ++ TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FTFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISETAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRID------PRSGVIETTGKLIAGEQ----YSITVQATDTGGKS 135
            +Y I   +  G  +FR+D           +    K     +    Y + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPNYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQXGVPEDAVVGSSVLQVAAADADEG 280



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 28/152 (18%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKL---IAGEQYSITVQATDTGGKSS 136
           +NA + YSI  +S   L  F I   SG++ T  TG L   +A E   + + A D G    
Sbjct: 506 LNANLRYSI--ISGNKLGWFCISEHSGLVTTGATGGLDRELASE-IVLNISARDQGVHPK 562

Query: 137 QTIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSE 166
            +  ++ V +   N   PVF Q   Y+V+V E
Sbjct: 563 VSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVE 594



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYAIVQQMPRGNH-FSIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500


>gi|145309304|ref|NP_001398.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Homo
            sapiens]
 gi|229462826|sp|Q9NYQ7.2|CELR3_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; AltName:
            Full=Cadherin family member 11; AltName: Full=Epidermal
            growth factor-like protein 1; Short=EGF-like protein 1;
            AltName: Full=Flamingo homolog 1; Short=hFmi1; AltName:
            Full=Multiple epidermal growth factor-like domains
            protein 2; Short=Multiple EGF-like domains protein 2;
            Flags: Precursor
          Length = 3312

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 927  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 987  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1045

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 384 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 436

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 557 DVRPHTVVLRVTAT 570



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLL----EDN 900

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 404 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 458



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 722 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 780

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 781 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 836

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 837 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPMGSTIVVISAS 883



 Score = 43.5 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1050 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1164

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185



 Score = 42.7 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 642 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 673


>gi|359324191|ref|XP_851109.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-11 X-linked [Canis
           lupus familiaris]
          Length = 1308

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P+I    ++      ++ +I A D D G NAEI Y +      
Sbjct: 452 LLVKVKDENDNAPVFTQPLISLSLLENNSPGTKLTEISAMDADSGHNAEINYLL---GVD 508

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D  +G++    KL     E+YS TV A D G  S  T   VSV +   N  SP
Sbjct: 509 APSEFNLDHHTGILTVVKKLDREKQEKYSFTVLAKDKGMPSLITNATVSVTILDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 569 IFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 23/169 (13%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
           + LDR+     K+ F V+A++K   +     +++V + D NDN+P          +P   
Sbjct: 526 KKLDRE--KQEKYSFTVLAKDKGMPSLITNATVSVTILDQNDNSPIFTHNEYNFYVPENL 583

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            + G     +  I  TD D G N+ +T SI  +++    +F IDP++GVI+         
Sbjct: 584 PRHG----TVGLITVTDPDYGENSVVTLSILDLND----EFTIDPQTGVIQPNISFDREK 635

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF----QQNTYDV 162
            E+Y+  V+A D G  S  +  +V++ V   N   PVF      N+Y++
Sbjct: 636 QERYTFYVKAEDGGKISHSSTAKVTINVVDVNDNKPVFIVPSSNNSYEL 684



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D     ++ F V A +    + S    +T+N+ D+NDN P   ++P      
Sbjct: 624 VIQPNISFDREKQERYTFYVKAEDGGKISHSSTAKVTINVVDVNDNKPVF-IVPSSNNSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      +  + A DND G+NAE+ YSI   +   L  F ID  +G I    K +
Sbjct: 683 ELVLPSTNPGTVVFTVFAVDNDTGMNAELHYSIVGGNTKSL--FIIDQTTGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + ++A D G   S
Sbjct: 741 VTDLGLHRLIIKAKDLGQPES 761



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      + A  D D+G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK----GQST 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + V+  D G   +SS  I+++SV 
Sbjct: 185 FGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQISVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF+++  +VN+ E A + ++V  +
Sbjct: 241 -DTNDNCPVFKEDEIEVNIPENAPVGTSVTQL 271



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L +++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQISVADTNDNCPVFKE-DEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     L 
Sbjct: 257 NIPENAPVGTSVTQLHATDADIGENAKIQFYFSNLVSNIAKRLFHLNTTTGLITIQEPLD 316

Query: 118 --AGEQYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             A   + + + A+D G   ++ +V V+V       P  + R  +   N   V +SE A 
Sbjct: 317 REASPNHKLLILASDGGLIPAKAMVLVNVTDINDNAPSIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ +A ITV+
Sbjct: 376 LNTKIALITVT 386



 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 25/199 (12%)

Query: 2   LVVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           L+  +E LDR+  PN    +  ++A +  G        + VN+ DINDNAP +    +I 
Sbjct: 308 LITIQEPLDREASPN---HKLLILASD--GGLIPAKAMVLVNVTDINDNAPSIDIRYIIN 362

Query: 58  PIQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGV 109
           PI       +      +I  I  TD D   N  +T    H        FR+ P      +
Sbjct: 363 PINGTVVLSENAPLNTKIALITVTDKDADHNGMVTCFTDHEV-----PFRLRPVFSNQFL 417

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +ET   L   +  +Y+I + A D G    +Q+ V +  V   N  +PVF Q    +++ E
Sbjct: 418 LETAAYLDYESTREYAIKLLAADVGKPPLNQSSVLLVKVKDENDNAPVFTQPLISLSLLE 477

Query: 167 GASINSTVATITVSRLASG 185
             S  + +  I+     SG
Sbjct: 478 NNSPGTKLTEISAMDADSG 496


>gi|344281746|ref|XP_003412638.1| PREDICTED: protocadherin-9 isoform 1 [Loxodonta africana]
          Length = 1237

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVAENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDADAGDNKAVTLSILNDNEN 617



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K  + +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPASTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGDNKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADVGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPP 58
           L+  + +LDR+       +  V+A +   T A   V  T+N+ D+NDN P + +   I P
Sbjct: 311 LITVQRSLDRE--ETAIHKVTVLASDGSSTPARATV--TINVTDVNDNPPNIDLRYIISP 366

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSG 108
           I       +      +I  I  +D D  VN ++   I     +H+     +++ ++  S 
Sbjct: 367 INGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLE-TSS 425

Query: 109 VIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +++  G     +++S  + A+D+G  S +QT +    +   N   P+F Q   +++V+E 
Sbjct: 426 LLDYEGT----KEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVAEN 481

Query: 168 ASINSTVATITVSRLASG 185
                 + TI+ +   SG
Sbjct: 482 NRRGLYLTTISATDEDSG 499


>gi|313226181|emb|CBY21324.1| unnamed protein product [Oikopleura dioica]
          Length = 2431

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 16/179 (8%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+  +   ++FQV A +  G   S  V + VNL D+ND+ P+        ++  E  R
Sbjct: 352 LDRELID--HYKFQVKATD--GGGLSDIVDIVVNLIDVNDSPPKFSQ-SSYSVKVAEDSR 406

Query: 69  --QIV-KIEATDNDLGVNAEITYSIYH--VSNTGLHK-FRIDPRSGVIETTGKLIAGEQ- 121
             QI+ KI ATD+D G NA ++Y+I    ++   ++K F+++  +GVI     L   ++ 
Sbjct: 407 PGQIIGKIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKLNEETGVISLAENLDNEQKK 466

Query: 122 -YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            YS  + A D G   KS +  VE++V+   N   PVF++    V ++E +++NS + T+
Sbjct: 467 YYSFEIIAKDHGIPQKSDRAKVEINVM-DVNDNPPVFEKREIKVTIAEDSAVNSIITTV 524



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 12/177 (6%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEA 75
           +++F+V A   + + AS    L +++ND+NDN P         ++      R IV  ++ 
Sbjct: 42  QYKFKVTASNTKTSEASF-CWLLIHVNDVNDNEPVFGQTEYKFEVHESTPVRTIVGSVDV 100

Query: 76  TDNDLGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQA 128
           TD DL   A +  S+      S      F ID ++G I T  +L    IA  ++ +  + 
Sbjct: 101 TDKDLMDQANLRLSLIEQGTKSPKSPDDFTID-KNGRIMTHRELDREQIASYKFYVIAKD 159

Query: 129 TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           + +    SQ  VEVS++   N   PVF ++  +V++SEG  I + V ++  +    G
Sbjct: 160 SQSPIHQSQAKVEVSILDD-NDSPPVFAKDELEVHLSEGTKIGTKVISVKATDADEG 215



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +++   LDR+      ++F VIA++ Q         + V++ D ND+ P       +++ 
Sbjct: 137 IMTHRELDRE--QIASYKFYVIAKDSQSPIHQSQAKVEVSILDDNDSPPVFAK-DELEVH 193

Query: 63  AGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
             E  +   +++ ++ATD D G N ++TY++ +  +T    F +D  SG I     L   
Sbjct: 194 LSEGTKIGTKVISVKATDADEGENGKVTYALMNDKDT----FAVDATSGNISLIRDLDFE 249

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTV 174
              ++ + V+A D G +  ++IV V+VV    N  +P F  N     V E A I  TV
Sbjct: 250 VNRKFELRVRAQDHGRRRQESIVTVTVVIVDLNDNAPHFNINPLVARVKEDAKIGHTV 307



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 12/175 (6%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIE 74
           KF  +V A++         V++TV + D+NDNAP     P++  ++  A         I 
Sbjct: 253 KFELRVRAQDHGRRRQESIVTVTVVIVDLNDNAPHFNINPLVARVKEDAKIGHTVTFAIA 312

Query: 75  ATDNDLGV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATD 130
           +  +D    N  ++Y++    +  L  F ID  +G I T  K++  E    Y   V+ATD
Sbjct: 313 SDKDDPNSPNGRLSYTLI---SPNLLPFAIDKNTGRI-TLVKILDRELIDHYKFQVKATD 368

Query: 131 TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            GG S    + V+++   N   P F Q++Y V V+E +     +  I  +   SG
Sbjct: 369 GGGLSDIVDIVVNLI-DVNDSPPKFSQSSYSVKVAEDSRPGQIIGKIAATDSDSG 422



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 22/137 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--------- 69
           +  ++ AR+    +     ++ + + D+NDNAP          ++ + R           
Sbjct: 575 YELEIEARDHGTPSLYAKATVMITVLDVNDNAP--------HFESSKKRYYVREDKDPGT 626

Query: 70  -IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            I KIEA D D+G NA + Y +     T  + F +D  +G +E    L   ++  Y+ITV
Sbjct: 627 IIAKIEADDRDIGDNANLEYFLLPNRETN-NMFYLDSATGELELRQALDFEKKRNYTITV 685

Query: 127 QA-TDTGGKSSQTIVEV 142
           Q  +D+   +   I+EV
Sbjct: 686 QVFSDSLQTTEDLIIEV 702


>gi|427796113|gb|JAA63508.1| Putative cadherin-n2, partial [Rhipicephalus pulchellus]
          Length = 1563

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 12/174 (6%)

Query: 9   LDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           LDRD P+   ++RF V A ++ G        + VNL D+NDNAP  P  +      + G 
Sbjct: 54  LDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIYTGNVTENGT 113

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIY--HVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           A   ++ + ATD D    G NA + YSI    V+  G   F ID  +GVI T    +  E
Sbjct: 114 AGMTVMTMTATDYDDPNEGNNARLAYSIEQNQVNENGELIFTIDEETGVISTAVCCLDRE 173

Query: 121 ---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +Y+I V A D GG        +  +   N   P F +  + V+V E  + N
Sbjct: 174 TNPEYTIKVVAVDGGGLKGTGTATIK-IKDINDMPPEFTKKDWFVDVEETEADN 226


>gi|334312920|ref|XP_001372208.2| PREDICTED: cadherin-16 [Monodelphis domestica]
          Length = 788

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 14/190 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI--PPI 59
           + V++E LDR+     K++  V AR  +G   S P+ LTV + D NDN P  P+   P  
Sbjct: 288 ICVTRE-LDREIQE--KYQITVWARNMEGMVYSDPLVLTVFVTDENDNPPNCPLADSPSE 344

Query: 60  QIQAGEARRQIVKIEATDNDL--GVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGK 115
            ++   +  ++ +++ATD D     NA + Y +      G     F +D  +G +     
Sbjct: 345 VLELSSSGTEVTRLQATDADDPNSPNAHVVYKLLSQEPPGPEGSSFSVDLHTGAVTVQDT 404

Query: 116 -LIAGEQYSITVQATDTGGKSS--QTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASI 170
            L AGE Y + V A D  G+     +  EVS+ V   N  +PVF  + Y  V++SE    
Sbjct: 405 PLKAGELYKLLVLAADLAGEEGGLSSTCEVSIKVMDVNDHAPVFSASQYGPVSLSEDTVP 464

Query: 171 NSTVATITVS 180
            + VAT+T +
Sbjct: 465 GTRVATVTAT 474


>gi|195159808|ref|XP_002020770.1| GL15812 [Drosophila persimilis]
 gi|194117720|gb|EDW39763.1| GL15812 [Drosophila persimilis]
          Length = 1738

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-----QIQ 62
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P             
Sbjct: 148 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGVYFGNVTENGT 207

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           AG A   +  I+  D +   NA++ YSI        TG   F I+  +GVI+T    +  
Sbjct: 208 AGSAVMTMSAIDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIETETGVIKTAVCCLDR 267

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE--GASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +   V E  G  I  T 
Sbjct: 268 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWFTEVDETNGTYIPETP 326

Query: 174 VATITV 179
           + T+TV
Sbjct: 327 ILTVTV 332


>gi|170032327|ref|XP_001844033.1| protocadherin gamma B4 [Culex quinquefasciatus]
 gi|167872319|gb|EDS35702.1| protocadherin gamma B4 [Culex quinquefasciatus]
          Length = 2020

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 13/185 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP 58
           Y+V     LDR+    GK+   V+A ++   A +    L +++ND+ND+ P         
Sbjct: 666 YIVRVNGVLDRE--EIGKYNLTVVAADRGTPARTATAHLIIHVNDVNDHEPVFEKSEYST 723

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
           +  +       +  I ATD D GVNA+I Y    VS      F+IDP SG+I T  +L  
Sbjct: 724 VLSELAPPGTYVASITATDEDTGVNAQIFYDF--VSGNNNQWFKIDPSSGLITTQAQLDR 781

Query: 117 -IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            + G    +++ A D G   K + T ++V+++   N  +P F Q   ++ ++E     + 
Sbjct: 782 EVNG-NIELSISARDGGPNPKWAHTQLKVTIL-DENDEAPTFAQPRLNITLNENTKPKTV 839

Query: 174 VATIT 178
           VA +T
Sbjct: 840 VAVLT 844



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
            S   ++T+ + D ND+AP        QI   E      ++++  ATD DLGVN++IT+SI
Sbjct: 1542 SASTTVTIEVLDENDDAPEFTQTHS-QISINETTPIGTELIRFRATDMDLGVNSQITFSI 1600

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSVVP 146
               +      F IDP SG +    +L+  E    YS+ + A+D G  + S TI+ +  V 
Sbjct: 1601 --AAGNRRDTFHIDPTSGYL-YLHRLLDYEDTQSYSLNITASDGGNPRLSTTILFMVNVI 1657

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
              N   P F        + EG  + + + T+T     SG 
Sbjct: 1658 DSNDNPPSFPNTAIVRQIREGIPLKTPIVTVTAEDPDSGL 1697



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 19/152 (12%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRLPMIPPIQ 60
            + +K NLDR+      +  QVIAR+ QGT    P + T+ L   D NDN P      P Q
Sbjct: 881  LTTKSNLDRE--RVASYNIQVIARD-QGTPPQ-PSTATIQLTIEDSNDNNPEFY---PKQ 933

Query: 61   IQAGEAR-----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
                 +      R I++++ATD D G NA I+Y I    + G   F ID  +G I   G 
Sbjct: 934  YFLALSEDTPVGRSILQVQATDRDEGANAAISYEIV---SGGDGMFSIDAATGQISLRGS 990

Query: 116  LIAGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
            L    +  + I V A D GG+ ++    V ++
Sbjct: 991  LKKSSKPLHKIVVAAKDKGGRRAERDAVVEII 1022



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEAT 76
            +   + A +      S  +   VN+ D NDN P  P    + QI+ G   +  IV + A 
Sbjct: 1632 YSLNITASDGGNPRLSTTILFMVNVIDSNDNPPSFPNTAIVRQIREGIPLKTPIVTVTAE 1691

Query: 77   DNDLGVNAEITYSIYHVS--NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            D D G+N ++TY I      N   H F I+P +GVI T   +   A + Y +TV ATD  
Sbjct: 1692 DPDSGLNGKVTYEIASQDPENRKRH-FGINPTTGVIHTLHAIDREAIDTYRLTVIATDQA 1750

Query: 133  -----GKSSQTIVEVSVVPGPNTRSPVF 155
                   S++ +V V +V   N  +PVF
Sbjct: 1751 PVPSQRMSAEKLVTV-IVEDINDNAPVF 1777



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 20/186 (10%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI- 59
            +L V K  LDR+  +   +   +   ++   A S  V + V++ D NDN P+      I 
Sbjct: 1297 FLYV-KSALDREERD--YYSLTITCTDEGDPARSSSVPVIVHVIDENDNPPQFTNSTFIF 1353

Query: 60   QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
             +   E     V K+ A D D+G NAE+ Y +    ++    F ID R+G I+T  +   
Sbjct: 1354 SVAENEPADTFVGKLTAVDRDIGRNAELIYML----SSKQDDFTIDSRNGFIKTMHEFDR 1409

Query: 117  -----IAGEQYSITVQAT--DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                   G+ + I ++AT  D G    +  V++ V +   N  +P F +  Y V +SEG+
Sbjct: 1410 EALVRTTGQNF-IMLEATVSDNGLSRLRDKVKIKVFITDVNDNAPQFVRAPYKVQISEGS 1468

Query: 169  SINSTV 174
            SI + +
Sbjct: 1469 SIGTQL 1474



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 13/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI 61
            + S +++DR+      +   V+AR       +   ++ + + D+NDNAP  L     I +
Sbjct: 1093 ISSAKHIDREAA--AFYSLTVVARNGLAFGQT---TVNITIIDLNDNAPTFLHDHDEINL 1147

Query: 62   QAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
                A  Q + + +A D D G N+ I+YS+ + +  GL  FRI   +GV+     ++   
Sbjct: 1148 PENTAVGQEIYLSKAKDLDSGANSRISYSLSY-NPQGL--FRISETTGVLYLNRPVLVDP 1204

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G   ++ + A+D+G     T   V+V +   N  +PVF   +Y+ ++ E   +NS    +
Sbjct: 1205 GTTLTLEITASDSGDPQLSTKSSVTVTIEDVNDHTPVFDHTSYETSLLESMPVNSRFFAL 1264

Query: 178  TVS 180
              S
Sbjct: 1265 AAS 1267



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 11/171 (6%)

Query: 15   NPGK-FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIV 71
            +PG     ++ A +      S   S+TV + D+ND+ P           +++     +  
Sbjct: 1203 DPGTTLTLEITASDSGDPQLSTKSSVTVTIEDVNDHTPVFDHTSYETSLLESMPVNSRFF 1262

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             + A+D D+G+N  I+Y+I  +      KF I P  G +     L   E+  YS+T+  T
Sbjct: 1263 ALAASDADIGMNQRISYAI--IEGNVDRKFGIFP-DGFLYVKSALDREERDYYSLTITCT 1319

Query: 130  DTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G   +SS   V V V+   N   P F  +T+  +V+E    ++ V  +T
Sbjct: 1320 DEGDPARSSSVPVIVHVI-DENDNPPQFTNSTFIFSVAENEPADTFVGKLT 1369



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 19/161 (11%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEAT 76
           R+ ++    Q T    P+ + + + DINDNAP  P  P I +   E+     +++   AT
Sbjct: 344 RYDLVILSSQPT---YPIEVRITVIDINDNAPEFPE-PSIAVSFSESAISGTRLLLDAAT 399

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGV----IETTGKLIAGEQ--YSITV 126
           D D+G N ++T     V      KFR+    +P   V    +ET GKL    +  Y++ +
Sbjct: 400 DKDVGEN-KVTDDYRIVDGNPDEKFRLAVTTNPSGDVYYLHLETIGKLDRETRGSYTLNI 458

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            A D G       ++V+V V   N   P+F  + Y V+++E
Sbjct: 459 SAKDGGTPPKFGYLQVNVTVLDVNDNPPIFDHSDYIVSLNE 499



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 20/176 (11%)

Query: 19   FRFQVIAREKQ---GTAASVPVSLTVNLNDINDNAPR--------LPMIPPIQIQAGEAR 67
            +R  VIA ++        S    +TV + DINDNAP         LPM   +++    + 
Sbjct: 1740 YRLTVIATDQAPVPSQRMSAEKLVTVIVEDINDNAPVFVSMNAAILPM-KDVRMGVDSSP 1798

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-QYSITV 126
              I+ I A D D   N  +TY +    NT L  F++   +G I     +   E +Y ++V
Sbjct: 1799 NAIMFINAHDADSSSNGLVTYEMTG-GNTDL--FKLHRSTGAITLRKPISKPEIRYQLSV 1855

Query: 127  QATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +ATD       KSS   + +      N   PVF +     +VSE   I +++ T++
Sbjct: 1856 RATDEAVQNERKSSDAYITILTTVPANNNGPVFVKKELSGSVSENEPIGTSILTVS 1911



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 4/52 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
           ++++ A+DNDLG N++IT   Y++S+T   +F +DP +GVI TT +L    Q
Sbjct: 507 VLQVMASDNDLGDNSKIT---YYLSDTET-QFTVDPETGVISTTEQLTCPHQ 554



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 10/192 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+    G     + AR+           L V + D ND AP     P + I
Sbjct: 772 LITTQAQLDREVN--GNIELSISARDGGPNPKWAHTQLKVTILDENDEAPTFAQ-PRLNI 828

Query: 62  QAGEARRQ---IVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
              E  +    +  + A D+D G N  ITYS++  V       F +D  SG + T   L 
Sbjct: 829 TLNENTKPKTVVAVLTAVDHDQGTNGSITYSMHPSVEKNYPGIFHLDTISGQLTTKSNLD 888

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                 Y+I V A D G     +   + + +   N  +P F    Y + +SE   +  ++
Sbjct: 889 RERVASYNIQVIARDQGTPPQPSTATIQLTIEDSNDNNPEFYPKQYFLALSEDTPVGRSI 948

Query: 175 ATITVSRLASGC 186
             +  +    G 
Sbjct: 949 LQVQATDRDEGA 960


>gi|344281748|ref|XP_003412639.1| PREDICTED: protocadherin-9 isoform 2 [Loxodonta africana]
          Length = 1203

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVAENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDADAGDNKAVTLSILNDNEN 617



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K  + +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPASTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGDNKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADVGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGT-VY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPP 58
           L+  + +LDR+       +  V+A +   T A   V  T+N+ D+NDN P + +   I P
Sbjct: 311 LITVQRSLDRE--ETAIHKVTVLASDGSSTPARATV--TINVTDVNDNPPNIDLRYIISP 366

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSG 108
           I       +      +I  I  +D D  VN ++   I     +H+     +++ ++  S 
Sbjct: 367 INGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLE-TSS 425

Query: 109 VIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +++  G     +++S  + A+D+G  S +QT +    +   N   P+F Q   +++V+E 
Sbjct: 426 LLDYEGT----KEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVAEN 481

Query: 168 ASINSTVATITVSRLASG 185
                 + TI+ +   SG
Sbjct: 482 NRRGLYLTTISATDEDSG 499


>gi|405977654|gb|EKC42093.1| Protein dachsous [Crassostrea gigas]
          Length = 643

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 17/163 (10%)

Query: 38  SLTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           S T+ ++D+NDNAP+         +P    +   A   +V + ATD DLG NA +TYSI 
Sbjct: 431 SFTLIVDDVNDNAPKFNKTVYTASVP----EKAPAGTSVVNVMATDPDLGENARVTYSII 486

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYS---ITVQATDTGGKSSQTIVEVSV-VP 146
              ++    F I   +G I T     I  E  S   ITV ATD G     +   VS+ + 
Sbjct: 487 SNPSSDSDWFEISDTTGFITTKSTANIDCEHNSNPWITVIATDHGSPPLSSTATVSITID 546

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR--LASGCA 187
             N   PVF+++ Y+  V E  ++ S +  +++S   +ASG A
Sbjct: 547 DVNDLEPVFERSYYEAKVPENVAVGSCILALSLSHTGVASGFA 589



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 13/120 (10%)

Query: 34  SVPVSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           S  +++TVN+ D NDNAP     +   + P  I  G +   IVK+ ATD D G N  ITY
Sbjct: 209 STDLTVTVNVLDANDNAPEFTHTKYSTVIPENILIGAS---IVKVSATDIDSGENGHITY 265

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS--SQTIVEVSV 144
            +    +   H F I+P +G+I    ++    Q  Y ++V A D G ++  S  +VEV++
Sbjct: 266 LLDRQRDPEEH-FVIEPNTGIIRINKQVDYEHQKHYELSVIARDNGSQTLESNAVVEVNI 324



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 19/167 (11%)

Query: 35  VPVSLTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           V + + VN+ DINDNAP  P     +   +I    ++  I  +   D D+GVN     ++
Sbjct: 95  VAIQIQVNVTDINDNAPYFPNGSKSLSLSEISPNGSKVHIGSV--IDRDIGVNTVRPPAV 152

Query: 91  YHVSNTGLHKFRIDPRSGVIETT--------GKLIAG---EQYSITVQATDTGGKSSQTI 139
             +S    + F+++ ++   + T        GKL      ++YS+ +Q +D G     T 
Sbjct: 153 I-ISGNQENMFKLETKTTGSQNTLYLDLVLNGKLDYDNGVKKYSLIIQVSDGGTPQRSTD 211

Query: 140 VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           + V+V V   N  +P F    Y   + E   I +++  ++ + + SG
Sbjct: 212 LTVTVNVLDANDNAPEFTHTKYSTVIPENILIGASIVKVSATDIDSG 258


>gi|321457976|gb|EFX69052.1| hypothetical protein DAPPUDRAFT_62647 [Daphnia pulex]
          Length = 1785

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 33/179 (18%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------RLPMIPPIQIQAGEARRQI 70
           F     A +  G A SVP  L++ ++DINDN P        RL     IQ +A +   Q+
Sbjct: 591 FTLTYTAIDGGGKATSVP--LSIKIDDINDNPPVFEQNQYRRL-----IQNRALDFDPQL 643

Query: 71  VKIEATDNDLGV---------NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE- 120
           V ++ATD D G+         +  I+YSI    NT  + F I   SG+++ T  + A E 
Sbjct: 644 V-VKATDKD-GIRKGHSPPIQDGRISYSIV-AGNTADNLFNIGRDSGILDVTRPINATEL 700

Query: 121 ---QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              ++ +TV+ATD+G   + + T+V ++V        P+FQQN Y VNV E A+ +S V
Sbjct: 701 GEVRFVLTVRATDSGTPPQHADTVVTITVGAVDGNDPPIFQQNQYHVNVVERATPDSFV 759



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 14/167 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           V   + LD + P+  +   QVIAR   G   S   +LT+ L D+NDN P          +
Sbjct: 467 VTGADKLDYENPDRREMVVQVIAR-GGGRRLSSTATLTILLVDVNDNIPIFDESSYSFNV 525

Query: 62  QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRI-----DPRSGVIETTGK 115
               A   ++ ++ ATD D GV  ++ Y +      G  +F +     D   GV   +  
Sbjct: 526 VENSAPGSLISRLSATDADSGVFGQLRYEL---RGFGAERFSVNSSTGDLTVGVCGLSTC 582

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           L   +Q  +++T  A D GGK++   + +  +   N   PVF+QN Y
Sbjct: 583 LDYEDQDIFTLTYTAIDGGGKATSVPLSIK-IDDINDNPPVFEQNQY 628



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)

Query: 19   FRFQVIAREK-QGTAASVPVS--LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKI 73
            + F VIA ++ QG+      S  + V L D+NDNAP    P    +  +       + ++
Sbjct: 1144 YTFTVIAADQPQGSEEQKRSSALVMVELIDVNDNAPAFTQPSYTAVVPENAPLDWSVSQV 1203

Query: 74   EATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA---GEQYSITVQAT 129
            EA D D      + YS+ +     GL    + P +G I   G L      E Y +TV+A 
Sbjct: 1204 EALDPDEQEGGIVEYSLVNEGRLEGL--LTVMPNTGSIIVKGPLTGKGRSEPYVLTVRAQ 1261

Query: 130  DTGGKSSQTIVEVSVVPG---PNTRSPVFQQNTYD 161
            D G     + ++++V  G   PN   P F + ++D
Sbjct: 1262 DKGDSPLFSDIDINVYVGDITPNDGVPSFVKPSFD 1296


>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
 gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
           Full=Protein fat; Flags: Precursor
 gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
          Length = 5147

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A +    L +++ND+ND+ P         +  +    
Sbjct: 452 LDRE--EIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 509

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F +DP +G+I TTG L     +   +
Sbjct: 510 GSFVASITATDEDTGVNAQVHYDI--LSGNELKWFSMDPLTGLIVTTGPLDREIRDTVEL 567

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           ++ A D G   K + T ++V ++   N  +P F Q   +V + E A   + VA +T +  
Sbjct: 568 SISARDGGPNPKFAYTQLKV-IILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDH 626

Query: 183 ASG 185
             G
Sbjct: 627 DQG 629



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            ++  + LDR+  +  + R +V +   Q T A      T+ ++D NDN P     +    I
Sbjct: 1877 LILNDTLDRETKSKYELRIRV-SDGVQYTEAYA----TIQVSDTNDNPPLFEDTVYSFDI 1931

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ +I A D DLG NA+++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1932 PENAQRGYQVGQIVARDADLGQNAQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1989

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D G  S  T + V   V   N  +P+F   +Y   V E   I + V T+
Sbjct: 1990 VQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTV 2049

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 2050 SAKDIDSG 2057



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            + ++  LDR+    G + F V A ++     +   S+ ++L D NDN P+   +  + + 
Sbjct: 2865 IYTRMRLDRE--EIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSLNVT 2922

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +  E    ++++ ++D DLG NA  +YS     N G  KFRI+P+SG I   G L   +Q
Sbjct: 2923 ENAEIGSFVIRVTSSDLDLGANANASYSF--SENPG-EKFRIEPQSGNITVAGHLDREQQ 2979

Query: 122  --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              Y + V A+D G   ++T + ++ +   N  +P F+ + Y  +  E
Sbjct: 2980 DEYILKVVASD-GAWRAETPITIT-IQDQNDNAPEFEHSFYSFSFPE 3024



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT++++D+NDN P+       +  P +I  GE    +    A D D G NA + Y+I 
Sbjct: 2580 VNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEF---VFGARALDLDDGENAVVHYTI- 2635

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
              S    H F I+ ++GV+ T  +L    +      Y+I + A D G +S  +  E++V+
Sbjct: 2636 --SGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVI 2693

Query: 146  PGPNTRSPVF 155
              P    P F
Sbjct: 2694 LRPPELFPTF 2703



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 23/158 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL-------- 53
           + ++  LDR+     ++   VIAR++   T  S   ++ +N+ D+NDN P+         
Sbjct: 659 LTTRRPLDRE--KMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYS 716

Query: 54  --PMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                  I+++   E  R ++ + A+D D G NA I Y +    + G   F++D RSG I
Sbjct: 717 LADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRL---ESGGEGLFQLDARSGAI 773

Query: 111 ETTGKLIAG----EQYSITVQATDTGGKSSQ--TIVEV 142
              G   A       Y + V A D G + SQ   IVE+
Sbjct: 774 SLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEI 811



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 32/136 (23%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------------RL 53
           NLDR+  + G ++  + AR+         + + V + D+NDN P               L
Sbjct: 227 NLDRE--SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETAL 284

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
           P  P            +V + A+DNDLG N++ITY +        H+F ++P +GVI TT
Sbjct: 285 PGTP------------VVTVMASDNDLGDNSKITYYLAETE----HQFTVNPETGVISTT 328

Query: 114 GKLIAGEQYSITVQAT 129
            ++   +Q ++   A+
Sbjct: 329 ERVNCPQQTNVKSSAS 344



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            R P    + R + +A +KQ   +S  V +T+ + D+ND  P         I    A   +
Sbjct: 2126 RSPRKYQQTRQEFLAHQKQQRLSST-VKVTILIKDVNDEVPVFISANETAIMENVAINTV 2184

Query: 71   V-KIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AGEQY 122
            V  ++A DND G N  I Y +    +  + +     F ++P  G +     L       Y
Sbjct: 2185 VIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSY 2244

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
             + + A D G     T  ++ + +   N  SPVF    Y  +V+E ASI + V  ++ + 
Sbjct: 2245 LLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATD 2304

Query: 182  LASGC 186
            +  G 
Sbjct: 2305 VDEGA 2309



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 45   DINDNAPRLPMI----PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDNAP   +     P I +    A  Q + +    D D GVN+ I+YS+   +N    
Sbjct: 934  DLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL---TNNPNQ 990

Query: 100  KFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +FRI P +GV+     + A  G    + + ATD G    S  +    ++   N  +PVF 
Sbjct: 991  QFRIGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFD 1050

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASG 185
              +Y+ ++ E   +N+    +  + +  G
Sbjct: 1051 HTSYETSLPETTKVNTRFFALAATDIDLG 1079



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
            +N+ D ++N P+      + P+   A   +R IV++ A D  DLG N E+ YS+   + +
Sbjct: 3112 INIVDAHNNPPKFEQAEYLAPLPQDAVRGQR-IVRVHANDKQDLGTN-EMDYSLMTFNLS 3169

Query: 97   GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
             +  F +    G I      ++    +Y + V+ATD G   +S +T V V VV G N  +
Sbjct: 3170 SI--FSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRV-VIVVTGENMDT 3226

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            P F  N+Y V V E   + ST+ T+
Sbjct: 3227 PRFSVNSYQVIVPENEPVGSTILTV 3251



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 42/200 (21%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            YL V +  LDR+  +   +   V  R+    + S  V + +++ D NDNAP+        
Sbjct: 1104 YLFV-RAPLDREERD--YYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTF 1160

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT- 113
             IP    +   A   + K+ A D D+G NAE+++++    ++    F ID R+G I+T  
Sbjct: 1161 SIP----ENAPADTFVGKLTAVDRDIGRNAELSFTL----SSQTQDFTIDTRNGFIKTLR 1212

Query: 114  --------------------GKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                                G L   +AG    +    +D G    Q  V+V V V   N
Sbjct: 1213 PFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVN 1272

Query: 150  TRSPVFQQNTYDVNVSEGAS 169
              +P F +  Y V +SEGAS
Sbjct: 1273 DNAPEFLRAPYHVTISEGAS 1292



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSI 90
           + P+ + + + D+NDN+P  P  P I I   E+     ++    ATD D+G N  +T   
Sbjct: 137 TYPIEVRIKVLDVNDNSPEFPE-PSIAISFSESATSGTRLLLDAATDADVGENG-VTDQY 194

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ETTG L    +  Y + + A D G       +
Sbjct: 195 EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYL 254

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y+V+++E A   + V T+  S
Sbjct: 255 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 295



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 19/137 (13%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVNAEITYSIYHVS 94
            V + DINDN P    +  +Q      R        ++   ATD D G+NA++ +++    
Sbjct: 2479 VEVQDINDNDP----VFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLL--- 2531

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---TGGKSSQTIVEVSVVPGPN 149
               +H+F ID  +G I T   L   E   Y +T+ A D   T  ++S   + +S V   N
Sbjct: 2532 GEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTIS-VSDVN 2590

Query: 150  TRSPVFQQNTYDVNVSE 166
               P F   TY+V V E
Sbjct: 2591 DNIPKFDSTTYNVAVPE 2607



 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  ++A+D D G N  +   IY + N 
Sbjct: 2796 ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNV---IYRLQND 2852

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I T  +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2853 FDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPP 2911

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             F +  + +NV+E A I S V  +T S L  G 
Sbjct: 2912 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLGA 2943



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 20/160 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++     S    L + + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2244 YLLNITARDRGEPPQSTESQLLIRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2300

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             ATD D G N  I YSI  V     H F I   +GV+     L      +YS+TV+A D 
Sbjct: 2301 SATDVDEGANGRIRYSI--VLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDC 2358

Query: 132  -----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                  G +++  + +  +   N   P F  + Y   V E
Sbjct: 2359 ALENPAGDTAELTINILDI---NDNRPTFLDSPYLARVME 2395



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 83   NAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG- 133
            +AEI Y + +V+ TG        F ID + G++ T  +L   AG E+Y + V A   GG 
Sbjct: 1742 SAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQ 1801

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++S+T V V+V+   N   P F    +  NVSE   I  T++T+
Sbjct: 1802 PRTSRTKVRVTVL-DKNDSPPQFLDTPFVYNVSEDLQIGHTISTL 1845



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 23/185 (12%)

Query: 19   FRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQI 70
            FR  V+A ++   +    S    +TV + DINDNAP        ++PP    +  +   +
Sbjct: 1564 FRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAV 1623

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT-GKLIAGE-QYSITVQ 127
            +++ A D D   N  +TY I     +G  + F++   +G+I  T G     E +Y +T++
Sbjct: 1624 MQVHAKDADSSSNGLVTYEIV----SGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLK 1679

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
            +TD   +S +   EV +        G  +  P F+Q +    +V E   I +++ T+T +
Sbjct: 1680 STDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVT-A 1738

Query: 181  RLASG 185
             LAS 
Sbjct: 1739 HLASA 1743



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 7/153 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+T+ + D NDNAP           ++      ++++  A+D D GVN+++ +SI   + 
Sbjct: 1369 SITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSI--SAG 1426

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                 F ID  +G +     L   +   Y++ + A+D G  S  T V  +V V   N   
Sbjct: 1427 NRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNP 1486

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P+F        + EG  + + + T+T     SG
Sbjct: 1487 PIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSG 1519



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +   + ATD DLG N  I+Y I  +       F + P  G +     L   E+  Y++TV
Sbjct: 1067 RFFALAATDIDLGDNGRISYEI--IEGNTERMFGVFP-DGYLFVRAPLDREERDYYALTV 1123

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               D G  S  ++V V + V   N  +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1124 SCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1176


>gi|260809731|ref|XP_002599658.1| hypothetical protein BRAFLDRAFT_205548 [Branchiostoma floridae]
 gi|229284939|gb|EEN55670.1| hypothetical protein BRAFLDRAFT_205548 [Branchiostoma floridae]
          Length = 367

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQ 60
           ++ +  NLDR+  +   + F V  R++     S   ++TV + D+NDN P        I 
Sbjct: 210 VLYTSGNLDRESVS--SYSFLVYVRDQGTPQFSDQTTVTVYVLDVNDNTPNFTQTSYSIT 267

Query: 61  IQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
           I+   A+   I+ + ATDNDLG NA+I+YSI   S  GL  + ID  SG I
Sbjct: 268 IEENLAQGTSILTVSATDNDLGTNADISYSISTTSTLGLQFYNIDSTSGQI 318



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 12/124 (9%)

Query: 70  IVKIEATDNDLGVNA---EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
           I ++ ATD D G N    ++TYS    S     KF ID  +G I   G L    Q  Y++
Sbjct: 69  IGQVTATDADYGSNGLPDDVTYSFAATST----KFYIDEYTGDIRVKGALDKETQDTYTL 124

Query: 125 TVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           TV ATD+G   +    IV + +V   N  +PVF Q+TY  +V+E  ++ ++V T++ + +
Sbjct: 125 TVVATDSGTTPAVRSNIVYIRIVD-INDNAPVFGQSTYQTDVNEDVAVGTSVITLSANDV 183

Query: 183 ASGC 186
            +G 
Sbjct: 184 DNGT 187



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 19/182 (10%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
           K  LD++  +   +   V+A +   T A     + + + DINDNAP        Q    E
Sbjct: 111 KGALDKETQD--TYTLTVVATDSGTTPAVRSNIVYIRIVDINDNAPVFGQ-STYQTDVNE 167

Query: 66  ---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGE 120
                  ++ + A D D G N E+    Y +S+T +  F +D  +GV+ T+G L   +  
Sbjct: 168 DVAVGTSVITLSANDVDNGTNGEVN---YFMSDTSV-PFTLDNTTGVLYTSGNLDRESVS 223

Query: 121 QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDV----NVSEGASINSTV 174
            YS  V   D G    S QT V V V+   N  +P F Q +Y +    N+++G SI +  
Sbjct: 224 SYSFLVYVRDQGTPQFSDQTTVTVYVLD-VNDNTPNFTQTSYSITIEENLAQGTSILTVS 282

Query: 175 AT 176
           AT
Sbjct: 283 AT 284


>gi|350591205|ref|XP_003483227.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like [Sus
           scrofa]
          Length = 2864

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 480 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 539

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
           D D  VN  + Y+ +     G   F I+P SG++ T   L   A   Y +T  A D G  
Sbjct: 540 DRDAHVNGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRWLDREAVPVYELTAYAVDRGVP 598

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 599 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 643



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 430 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 485

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 486 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 539



 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S    +TV + D+NDN P   M     ++  E       +V + A
Sbjct: 275 YFFGVEARDHGSPPLSASARVTVTVLDVNDNRPEFTM-KEYHLRLNEDATVGTSVVSVTA 333

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 334 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 389

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V V+E   + STV  I+ S
Sbjct: 390 ALHDHCYVHINITDA-NTHRPVFQSAHYSVKVNEDQPVGSTVVVISAS 436



 Score = 44.7 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36  PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
           PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 603 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 659

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
           V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 660 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 717

Query: 151 RSPVFQQ-----NTYDVNVSE 166
            SPV        N Y  N S+
Sbjct: 718 NSPVLNNFQILFNNYVSNRSD 738


>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
 gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
          Length = 3033

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+    GK+   V+A ++   A +    L +++ND+ND+ P         +  +    
Sbjct: 452 LDRE--EIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 509

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
              +  I ATD D GVNA++ Y I  +S   L  F +DP +G+I TTG L     +   +
Sbjct: 510 GSFVASITATDEDTGVNAQVHYDI--LSGNELKWFSMDPLTGLIVTTGPLDREIRDTVEL 567

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           ++ A D G   K + T ++V ++   N  +P F Q   +V + E A   + VA +T +  
Sbjct: 568 SISARDGGPNPKFAYTQLKV-IILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDH 626

Query: 183 ASGC 186
             G 
Sbjct: 627 DQGT 630



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
            ++  + LDR+  +  + R +V +   Q T A      T+ ++D NDN P     +    I
Sbjct: 1874 LILNDTLDRETKSKYELRIRV-SDGVQYTEAYA----TIQVSDTNDNPPLFEDTVYSFDI 1928

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  Q+ +I A D DLG NA+++Y +  VS+     F ++P++G++  T +L   E
Sbjct: 1929 PENAQRGYQVGQIVAKDADLGQNAQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1986

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y + VQA D G  S  T + V   V   N  +P+F   +Y   V E   I + V T+
Sbjct: 1987 VQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTV 2046

Query: 178  TVSRLASG 185
            +   + SG
Sbjct: 2047 SAKDIDSG 2054



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 10/173 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            + ++  LDR+    G + F V A ++     +   S+ ++L D NDN P+   +  + + 
Sbjct: 2862 IYTRMRLDRE--EIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLFSLNVT 2919

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +  E    ++++ ++D DLG NA  +YS     N G  KFRI+P+SG I   G L   +Q
Sbjct: 2920 ENAEIGSFVIRVTSSDLDLGANANASYSFSE--NPG-EKFRIEPQSGNITVAGHLDREQQ 2976

Query: 122  --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              Y + V A+D G   ++T + ++ +   N  +P F+ + Y  +  E +  +S
Sbjct: 2977 DEYILKVVASD-GAWRAETPITIT-IQDQNDDAPEFEHSFYSFSFPELSPFDS 3027



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 11   RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
            R P    + R + +A +KQ   +S  V +T+ + D+ND  P         I    A   +
Sbjct: 2123 RSPRKYQQTRQEFLAHQKQQRLSST-VKVTILIKDVNDEVPVFVSANETAIMENVAINTV 2181

Query: 71   V-KIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AGEQY 122
            V  ++A DND G N  I Y +    +  + +     F ++P  G +     L       Y
Sbjct: 2182 VIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSY 2241

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             + + A D G   +S++T + + ++   N  SPVF    Y  +V+E ASI + V  ++ +
Sbjct: 2242 LLNITARDRGEPPQSTETQLLIRIL-DENDNSPVFDPKQYSASVAENASIGAMVLQVSAT 2300

Query: 181  RLASGC 186
             +  G 
Sbjct: 2301 DVDDGA 2306



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 19   FRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVK 72
            + F ++A++   T   +  V+LT++++D+NDN P+       +  P +I  GE    +  
Sbjct: 2558 YHFTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEF---VFG 2614

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITV 126
              A D D G NA + Y+I   S    H F I+ ++GV+ T  +L    +      Y+I +
Sbjct: 2615 ARALDLDDGENAVVHYTI---SGRDQHYFDINTKTGVVSTKLELKTKTKSSDDLTYTIVI 2671

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             A D G +   +  E++V+  P    P F
Sbjct: 2672 SAMDQGEQPLSSKAELTVILRPPELFPTF 2700



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPR--------- 52
           + ++  LDR+     ++   VIAR++   T  S   ++ +N+ D+NDN P+         
Sbjct: 659 LTTRRPLDRE--KMSRYEIPVIARDQGAPTPQSATATVWLNVADVNDNYPQFYPRHYIYS 716

Query: 53  LPMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
           L     I+++   E  R ++ + A+D D G NA I Y +    + G   F++D RSG I 
Sbjct: 717 LTDDDDIKLKEEVEKERILLHVTASDKDDGDNALIEYRL---ESGGEGLFQLDARSGAIS 773

Query: 112 TTG----KLIAGEQYSITVQATDTGGKSSQ--TIVEV 142
             G     +     Y + + A D G + SQ   IVE+
Sbjct: 774 LRGDAPVSMHWKPHYKLLISARDAGQRRSQHDAIVEI 810



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 32/136 (23%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------------RL 53
           NLDR+  + G ++  + AR+         + + V + D+NDN P               L
Sbjct: 227 NLDRE--SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETAL 284

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
           P  P            +V + A+DNDLG N++ITY +        H+F ++P +GVI TT
Sbjct: 285 PGTP------------VVTVMASDNDLGDNSKITYYLAETE----HQFTVNPETGVISTT 328

Query: 114 GKLIAGEQYSITVQAT 129
            ++   +Q ++   A+
Sbjct: 329 ERVNCPQQTNVKSSAS 344



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 45   DINDNAPRLPMI----PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLH 99
            D+NDNAP   +     P I +    A  Q + +    D D GVN+ I+YS+   +N    
Sbjct: 931  DLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL---TNNPNQ 987

Query: 100  KFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQ 156
            +FRI P +GV+     + A  G    + + ATD G    S  +    ++   N  +PVF 
Sbjct: 988  QFRIGPVTGVLYLQRPIRAEPGTLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFD 1047

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASG 185
              +Y+ ++ E   +N+    +  + +  G
Sbjct: 1048 HTSYETSLPETTKVNTRFFALAATDIDLG 1076



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSI 90
           + P+ + + + D+NDN+P  P  P I I   E+     ++    ATD D+G N  +T   
Sbjct: 137 TYPIEVRIKVLDVNDNSPEFPE-PSIAISFSESATSGTRLLLDAATDADVGENG-VTDQY 194

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ETTG L    +  Y + + A D G       +
Sbjct: 195 EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYL 254

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y+V+++E A   + V T+  S
Sbjct: 255 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 295



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 19/137 (13%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVNAEITYSIYHVS 94
            V + DINDN P    +  +Q      R        ++   ATD D G+NA++ +++    
Sbjct: 2476 VEVQDINDNDP----VFELQSYHATVRENLPAGTHVLTPRATDKDEGLNAKLRFNLL--- 2528

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---TGGKSSQTIVEVSVVPGPN 149
               +H+F ID  SG I T   L   E   Y  T+ A D   T  ++S   + +S V   N
Sbjct: 2529 GEHMHRFHIDSESGEISTATTLDREETPVYHFTLMAQDSSITEPRASSVNLTIS-VSDVN 2587

Query: 150  TRSPVFQQNTYDVNVSE 166
               P F   TY+V V E
Sbjct: 2588 DNIPKFDSTTYNVAVPE 2604



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 39   LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +T+N+ D NDNAP +  +I   ++   E+  Q++  ++A+D D G N  +   IY + N 
Sbjct: 2793 ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNV---IYRLQND 2849

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F I   SG I T  +L   E   Y+  V+A D G         V + +   N   P
Sbjct: 2850 FDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPP 2908

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             F +  + +NV+E A I S V  +T S L  G 
Sbjct: 2909 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLGA 2940



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 20/160 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + AR++     S    L + + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2241 YLLNITARDRGEPPQSTETQLLIRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2297

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
             ATD D G N  I YSI  V     H F I   +GV+     L      +YS+TV+A D 
Sbjct: 2298 SATDVDDGANGRIRYSI--VLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDC 2355

Query: 132  -----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                  G +++  + +  +   N   P F  + Y   V E
Sbjct: 2356 ALENPAGDTAELTINILDI---NDNRPTFLDSPYLARVME 2392



 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 41/192 (21%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQ 62
            LDR+  +   +   V  R+    + S  V + +++ D NDNAP+         IP    +
Sbjct: 1108 LDREERD--YYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIP----E 1161

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--------- 113
               A   + K+ A D D+G NAE+++++    ++    F ID R+G I+T          
Sbjct: 1162 NAPADTFVGKLTAVDRDIGRNAELSFTL----SSQTQDFTIDTRNGFIKTLRPFDREALV 1217

Query: 114  ------------GKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
                        G L   +AG    +     D G    Q  V+V V V   N  +P F +
Sbjct: 1218 KVSRNAEAGGEDGSLRGSMAGNYMLLEATVWDNGIPRLQDKVKVKVIVTDVNDNAPEFLR 1277

Query: 158  NTYDVNVSEGAS 169
              Y V +SEGAS
Sbjct: 1278 APYHVTISEGAS 1289



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 23/185 (12%)

Query: 19   FRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQI 70
            FR  V+A ++   +    S    +TV + DINDNAP        ++PP    +  +   +
Sbjct: 1561 FRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAV 1620

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT-GKLIAGE-QYSITVQ 127
            +++ A D D   N  +TY I     +G  + F++   +GVI  T G     E +Y +T++
Sbjct: 1621 MQVHAKDADSSSNGLVTYEIV----SGPQELFKLQRNTGVITFTPGPQFKQEVRYQLTLK 1676

Query: 128  ATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
            +TD   +S +   EV +        G  +  P F+Q +    +V E   I +++ T+T +
Sbjct: 1677 STDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVT-A 1735

Query: 181  RLASG 185
             LAS 
Sbjct: 1736 HLASA 1740



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 7/154 (4%)

Query: 38   SLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+T+ + D NDNAP           ++      ++++  A+D D GVN+++ +SI   + 
Sbjct: 1366 SITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSI--SAG 1423

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
                 F ID  +G + +   L   +   Y++ + A+D G  S S T++   +V   N   
Sbjct: 1424 NRRDTFHIDSITGSLYSHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNP 1483

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            P+F        + EG  + + + T+T     SG 
Sbjct: 1484 PIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGL 1517



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 83   NAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG- 133
            +AEI Y + +V+  G        F ID + G++ T  +L   AG E+Y + V A   GG 
Sbjct: 1739 SAEIEYFVTNVTAAGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQ 1798

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++S+T V V+V+   N   P F    +  NVSE   I  T++T+
Sbjct: 1799 PRTSRTKVRVTVL-DKNDSPPQFLDTPFVYNVSEDLQIGHTISTL 1842



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +   + ATD DLG N  I+Y I  +       F + P  G +     L   E+  Y++TV
Sbjct: 1064 RFFALAATDIDLGENGRISYEI--IEGNTERMFGVFP-DGFLFVRAPLDREERDYYALTV 1120

Query: 127  QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               D G  S  ++V V + V   N  +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1121 SCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1173


>gi|403254095|ref|XP_003919814.1| PREDICTED: protocadherin-16 [Saimiri boliviensis boliviensis]
          Length = 3297

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 421 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 478

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   +++  H F IDP SG+I T 
Sbjct: 479 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHS--HWFSIDPTSGIITTA 532

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G  S  +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 533 VSLDYELEPQPQLIVVATDGGLPSLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 592

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 593 GTCFLQVTATDADSG 607



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 20/181 (11%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEAT 76
            R +++ + + G A +  V LT+ L D NDNAPR  + P       E+R     ++++EA 
Sbjct: 2138 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRF-LRPHYVAFLPESRPFEGPLLQVEAD 2195

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG- 132
            D D G   +I+YS+   S      F +DP +G+I TT  L   I  E   + + ATD G 
Sbjct: 2196 DLDQGSGGQISYSLA-ASQPARGLFHVDPATGIITTTAILDREIWAET-RLVLMATDRGS 2253

Query: 133  ----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
                G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  +
Sbjct: 2254 PALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVL 2308

Query: 189  M 189
             
Sbjct: 2309 W 2309



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             ++ Q++A +   QG A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2343 HYQLQLLAHDGPHQGHA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2397

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYS----ITVQA 128
             ATD D G N  I+Y +   ++     F +DP +G + T  + +A G + S    + ++A
Sbjct: 2398 SATDRDSGANGHISYHLASPAD----GFTVDPNNGTLFTIVETVALGHEGSGAVDVVLEA 2453

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2454 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLPHYRVAVTEDLPPGSTLLTL 2503



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 20/139 (14%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
            LTV++ D+ND AP        Q +     R+       ++ + ATD DLG N ++TY   
Sbjct: 1634 LTVSVADVNDEAPTF-----QQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQVTYG-- 1686

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
             VS+     F +DP +GV++T   L   EQ  I  TV A D G     T V V V V   
Sbjct: 1687 GVSS---ESFSLDPDTGVLKTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDE 1743

Query: 149  NTRSPVFQQNTYDVNVSEG 167
            N  +P F      + V EG
Sbjct: 1744 NDHAPTFGSAHLSLEVPEG 1762



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + +TV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1820 FQLKIEARDGGQPALSATLLVTVIVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1878

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
             D D G N  +TY  Y  + T    F ++P SG + T   L   +   Y+ +V A D
Sbjct: 1879 HDPDAGANGRVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVD 1932



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 206 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 262

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L
Sbjct: 263 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPL 319

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 320 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 379

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 380 PGQLVARISVS 390



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 11/136 (8%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNA 84
            ++ GTA     +L V++ + N+++PRL   P     A        + ++ ATD D G N 
Sbjct: 1083 QQTGTA-----TLRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFATDRDSGPNG 1137

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
             +TYS+  +S      FRI P++G + T   L   +Q  Y + VQ  D G  S  T   V
Sbjct: 1138 RLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQVQDGGSPSRSTTGTV 1196

Query: 143  SV-VPGPNTRSPVFQQ 157
             V V   N  SP F Q
Sbjct: 1197 HVAVLDLNDNSPTFLQ 1212



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++PP           I  + A D D GVN+ +T+++    
Sbjct: 881  VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 933

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G +     L    G  + + ++A D G     +   + VV    G  
Sbjct: 934  AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 993

Query: 150  TRSPVFQQNTYDVNVSEG 167
              +P F   TY V++  G
Sbjct: 994  GLAPRFDSPTYRVDLPSG 1011



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 23/147 (15%)

Query: 43   LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + D NDNAP        RLP   P     G A   +V   A D DLG  A ++Y +   +
Sbjct: 1535 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1584

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
            + G   FR+   +G +     L      ++ +TV A+D G   +S+  ++ VSV    N 
Sbjct: 1585 SGGDGHFRLHSSTGALSVVRPLDRERRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1643

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P FQQ  Y V + E +   +++ T+
Sbjct: 1644 EAPTFQQQEYSVLLRENSPPGTSLLTL 1670



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +Q+
Sbjct: 105 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 151

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 152 PEHTAFGTRYPLEPAHDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGAPVPELVV 208

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 209 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 267

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 268 APGSPVLQVFASDADAGA 285



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2671 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSLAENQPPGTLVTTL 2727

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
             A D D G    + YS+        G   F ++       +TG+L A         E + 
Sbjct: 2728 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARMPFDYEHTESFR 2781

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V A D G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2782 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2825



 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V++ V + D ND+AP        +++  G+  + +  + A+D D+G N ++ Y I     
Sbjct: 1734 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1793

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
            +G   F +D  SG   T   L       + + ++A D G  + S T++   +V   N  +
Sbjct: 1794 SG--AFVLDLASGEFGTMRPLDREVEPAFQLKIEARDGGQPALSATLLVTVIVLDANDHA 1851

Query: 153  PVFQQNTYDVNVSE 166
            P F    Y V V E
Sbjct: 1852 PAFPVPAYSVEVPE 1865


>gi|334329182|ref|XP_003341195.1| PREDICTED: protocadherin-16 [Monodelphis domestica]
          Length = 3184

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 22/182 (12%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEAT 76
            R +++ + + G +    V LT++L D NDNAPR  + P       E+R     ++K+EA 
Sbjct: 2020 RLRLVLQAESGGSFGFTV-LTLSLQDANDNAPRF-LKPHYAAFVPESRPLSGPLLKVEAD 2077

Query: 77   DNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D G   ++TYS+     T GL  F IDP  G I TT  L   I  E   + V ATD G
Sbjct: 2078 DLDQGPGGQVTYSLAPSQPTRGL--FHIDPAMGTITTTAILDREIWAET-RLVVMATDRG 2134

Query: 133  -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
                 G ++ T++ +      N   P   Q  ++V VSE A + S +A +T + + SG A
Sbjct: 2135 SPPLVGSATLTVLVIDA----NDNRPTIPQ-PWEVRVSEDALLGSEIARVTGNDVDSGPA 2189

Query: 188  IM 189
            + 
Sbjct: 2190 LW 2191



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 65/135 (48%), Gaps = 12/135 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LTV++ DIND AP  P      ++  E R     ++ + ATD DLGVN ++TY    VS 
Sbjct: 1513 LTVSVVDINDEAPTFPQAA-YHVRVSENRPPGTTVLTLRATDPDLGVNGQVTYG--GVSG 1569

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                 F +DP SGV+ T   L   EQ  I  TV A D G     + V V V V   N  +
Sbjct: 1570 D---TFSLDPNSGVLTTRQVLDREEQQEINLTVYAQDGGSPPLLSHVSVHVTVEDENDHA 1626

Query: 153  PVFQQNTYDVNVSEG 167
            P F  +   + V EG
Sbjct: 1627 PAFGSSHLSLEVPEG 1641



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 22/170 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKI 73
            ++  ++AR+ Q   ++   +LTV + D+NDNAP        +  P     G A   I+ I
Sbjct: 2226 YQLHLLARDGQHEGSA---NLTVQVEDVNDNAPTFSQSLYQVTLPEHTTPGSA---ILTI 2279

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLIAG-EQYSITVQAT 129
             ATD D G N  I+   YH+ +T    F IDP +G   ++E       G     + ++A 
Sbjct: 2280 SATDLDSGDNGRIS---YHLVSTA-EGFDIDPSNGTLFMMEAASLSPGGLGTMDMVLEAR 2335

Query: 130  DTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G  G+++Q IV + ++   N  +P F Q  Y + V+E     STV  +
Sbjct: 2336 DHGIPGRTAQAIVHIQLL-DENDYTPSFVQPHYHIVVAEDLPPGSTVLVL 2384



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 19/164 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIP--- 57
            V ++ +LDR+     +  +Q++ + + G       + TV++   D+NDN+P         
Sbjct: 1042 VTTRRSLDRE----QQSSYQLLVQVQDGGVPPRSTTGTVHIMVLDLNDNSPTFLHTLGAA 1097

Query: 58   ----PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+Q+  G A   +V +++A D D G N  I YS   V+  G   F + P SG + T
Sbjct: 1098 GGGLPVQVLEGIAPGTLVTRLQAKDPDEGENGTILYS---VTGPGSELFLLHPHSGELST 1154

Query: 113  TGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
             G L  +    Y +TV A D G     T +++ +   P TRSPV
Sbjct: 1155 AGPLSRLERPHYVLTVNAQDQGSPPRSTSLQLLLQVLPRTRSPV 1198



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 27/145 (18%)

Query: 41  VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V L D+NDNAP  P       +PP    AG     +  + A D D G N  +T+++    
Sbjct: 755 VLLEDVNDNAPSFPSPADTVWLPP---DAGPG-TPVYTLRAADPDTGTNGHVTFALV--- 807

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPN--- 149
             G   F +DP +G +    + + G  + + ++A D G    +S+ ++ V+V    +   
Sbjct: 808 AGGKGTFAVDPATGHVHLV-RPLGGLAHELELEARDGGSPPLTSRFLLRVAVQEAGSRAG 866

Query: 150 --------TRSPVFQQNTYDVNVSE 166
                    R P F Q +Y+V +SE
Sbjct: 867 AGTNGGAGGRLPKFDQPSYNVELSE 891



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            VS+ V + D ND+AP        +++  G+  + +  + A+D D G N +I Y I +   
Sbjct: 1613 VSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQTLTVLRASDPDAGPNGQINYQILNGDP 1672

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
            +G   F +D  SG + T   L    +  + + V A D G   +S+  +V V+V+   N  
Sbjct: 1673 SG--AFILDAVSGTLGTARSLDRETEPSFQLLVVARDGGQPVRSATVLVTVTVLDA-NDH 1729

Query: 152  SPVFQQNTYDVNVSEGASINSTV 174
            +P F   +Y V V E A I + +
Sbjct: 1730 APTFTAPSYAVEVPEDAPIGTLL 1752



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 20/165 (12%)

Query: 20   RFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------- 67
            R+  +     G AA   S  VS+TV + D+ND+AP  P   P++++   AR         
Sbjct: 1802 RYGFVVHAVDGAAAGPLSASVSVTVTVRDVNDHAPAFPAS-PLRLRLRSARTALGQGSSG 1860

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSI 124
               +  + A D D G NA I Y +   +  G     +D  +G I        +      +
Sbjct: 1861 PHALAILRAEDRDAGANASILYRLAGPAPPGA---SVDSYTGEIRLAHPPAALGPRDRVL 1917

Query: 125  TVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             + ATD G  + S T V V  + G   R P F + + +  + E A
Sbjct: 1918 FIVATDLGRPARSATGVVVVGLQGETERGPRFPRPSSEAALPEDA 1962



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---------PIQIQAGEARRQIVKI 73
             +A + QG+  +   ++ V++ D ND+ PRL   P         P    AG        I
Sbjct: 955  AVAGDAQGSLTAT-ATVRVSIRDRNDHGPRLTEEPTFLAVAENQPPGTTAGH-------I 1006

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
             ATD D G N  +TY +    +     F I P++G + T   L   +Q  Y + VQ  D 
Sbjct: 1007 TATDRDSGPNGHLTYHLLQPPDES-GAFHIHPQTGEVTTRRSLDREQQSSYQLLVQVQDG 1065

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVF 155
            G   +S+   V + V+   N  SP F
Sbjct: 1066 GVPPRSTTGTVHIMVL-DLNDNSPTF 1090



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
            F+  V+AR+      S  V +TV + D ND+AP     P   ++  E       ++++EA
Sbjct: 1699 FQLLVVARDGGQPVRSATVLVTVTVLDANDHAPTF-TAPSYAVEVPEDAPIGTLLLQLEA 1757

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD--T 131
             D D G N  +    Y++       F ++P SG + T   L    +  Y   V A D   
Sbjct: 1758 RDPDDGANGRVA---YYLGEGAAGAFLLEPGSGELRTAVPLDREREARYGFVVHAVDGAA 1814

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S ++     V   N  +P F
Sbjct: 1815 AGPLSASVSVTVTVRDVNDHAPAF 1838



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 24/158 (15%)

Query: 37  VSLTVNLNDINDNAPRLPMI-PPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVS 94
           V +TV + DIND+AP  P     +Q+    A      +E A D D G    +    Y +S
Sbjct: 130 VEVTVRVADINDHAPAFPKARASLQVPEHTAPGTRYPLEPAQDADAG---HLGTQGYALS 186

Query: 95  NTGL-HKFRIDPRSG-----VIETTGKLIAGE-------QYSITVQATDTGG--KSSQTI 139
             G    FR++ R G     V E    +++G+        Y++ ++A D G   + +Q +
Sbjct: 187 GEGAGQAFRLETRPGPDGSPVPEL---VVSGDLDRENRSHYTLRLEAYDGGAPPRRAQAL 243

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++V++V   N  +P F Q+ Y   VSE  +  S V  +
Sbjct: 244 LDVTLV-DINDHAPAFNQSRYRAVVSESLAPGSPVLQV 280



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 19/174 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEAT 76
            R  V+A ++         +LTV + D NDN P +P   P +++  E      +I ++   
Sbjct: 2125 RLVVMATDRGSPPLVGSATLTVLVIDANDNRPTIPQ--PWEVRVSEDALLGSEIARVTGN 2182

Query: 77   DNDLGVNAEITYSIYHVSNT-GLH-KFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            D D G       ++++V N  G+   F +    G I  T  L       Y + + A D  
Sbjct: 2183 DVDSGP------ALWYVLNPPGIQGPFSVGRYGGRISLTEPLDFEHMDCYQLHLLARDGQ 2236

Query: 133  GKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + S  + V+V  V   N  +P F Q+ Y V + E  +  S + TI+ + L SG
Sbjct: 2237 HEGSANLTVQVEDV---NDNAPTFSQSLYQVTLPEHTTPGSAILTISATDLDSG 2287


>gi|336244975|gb|AEI28405.1| FAT tumor suppressor-like protein 4, partial [Hemidactylus
           bowringii]
          Length = 254

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 14/189 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
           L+ +   +DR+      ++ +V+A     T  +V   + +++ D+NDN+P  L  +  + 
Sbjct: 58  LITTASIIDRE--EQAFYQLKVVASAGAITGDTV---VNIHVRDLNDNSPHFLHAVESVD 112

Query: 61  I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IA 118
           + +       I + +A D D G+N  + YS+ H        F I   SG I  TG L I 
Sbjct: 113 VVENWSTGHTIFQAKAVDPDEGINGMVHYSLKHNPKD---LFHIGEESGAISLTGPLDIN 169

Query: 119 GEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y + V A+D G   +SS  I+ +SV    N   PVF Q +YDV +SE   +NS   +
Sbjct: 170 AGSYQVEVLASDLGVPQRSSSFILTISV-HDVNDNPPVFDQLSYDVTISELEPVNSRFFS 228

Query: 177 ITVSRLASG 185
           +  S   SG
Sbjct: 229 VHASDKDSG 237



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 15  NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
           N G ++ +V+A +      S    LT++++D+NDN P    +   + I   E    +   
Sbjct: 169 NAGSYQVEVLASDLGVPQRSSSFILTISVHDVNDNPPVFDQLSYDVTISELEPVNSRFFS 228

Query: 73  IEATDNDLGVNAEITYSI 90
           + A+D D G N EI Y+I
Sbjct: 229 VHASDKDSGPNGEIAYTI 246


>gi|410036931|ref|XP_001146508.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3 [Pan troglodytes]
          Length = 3087

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 927  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 987  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1045

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 384 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 436

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 557 DVRPHTVVLRVTAT 570



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 900

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 722 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 780

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 781 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 836

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 837 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 883



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 404 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 458



 Score = 42.7 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 642 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 673



 Score = 42.7 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1050 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V + +V   N 
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHIRLV-DQND 1164

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185


>gi|383864729|ref|XP_003707830.1| PREDICTED: neural-cadherin-like [Megachile rotundata]
          Length = 1849

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 345 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYFGNVTENGT 404

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           +   ++ + A D D      NA +TYSI        TG   F+IDP +GVI T    +  
Sbjct: 405 SSMVVMTMTAVDYDDPAESSNARLTYSIEKNVIEEETGSPIFQIDPGTGVITTAVCCLDR 464

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ +EG  +    
Sbjct: 465 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETEGPDLPEMP 523

Query: 174 VATITV 179
           + T+TV
Sbjct: 524 ILTVTV 529


>gi|449506248|ref|XP_004186131.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15 [Taeniopygia
           guttata]
          Length = 2195

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-----IQIQAGEARRQIVKI 73
           + F + A +  G   SVPV++ + + D NDN+P    I         ++ GE+   ++K+
Sbjct: 477 YTFSMTASD--GVQESVPVTVNILVIDANDNSPTFSNISYSVKIYTDMKPGES---VIKL 531

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIA-GEQYSITVQATDT 131
            A D D G N +I Y I    + G   F I+  +G+I    G L+A G  Y++TV+A+D+
Sbjct: 532 TAVDADEGANGQIVYEIL-AGDQG--DFTINKHTGLITIAPGVLLAVGRSYALTVRASDS 588

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 +SS T V + V+P  N   P F Q  Y + VSE   I + +  +
Sbjct: 589 APPAQRRSSITTVYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAVLLNL 638



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 12/134 (8%)

Query: 40  TVNL--NDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           TVN+   D+NDN P   M  P  + +Q  EA   + ++ ATD D GVN ++ YS+ + +N
Sbjct: 702 TVNIVVTDVNDNGPVFDMFLPKNLSVQEEEANAFVGQVRATDADAGVNGQVHYSLANFNN 761

Query: 96  TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                FRI   +G I T  KL     + Y + V+ATD      ++ + +++ V   +  S
Sbjct: 762 L----FRI-TSNGSIYTAVKLNREVRDYYELIVEATDGAVDPRRSTLTLAIKVLDIDDNS 816

Query: 153 PVFQQNTYDVNVSE 166
           PVF   +Y V V E
Sbjct: 817 PVFTNASYTVCVPE 830


>gi|395535535|ref|XP_003769780.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
           [Sarcophilus harrisii]
          Length = 2694

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 87/193 (45%), Gaps = 24/193 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 261 VTTAEELDRETKSTHVFR--VTAQDHGTPRRSALATLTITVTDTNDHNPVFE-----QSE 313

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTG---LHKFRIDPRSGVIET 112
             E+ R+       ++ + ATD D   NA I Y +  V   G      F IDPRSGVI T
Sbjct: 314 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRL--VEGPGGPPPEVFEIDPRSGVIRT 371

Query: 113 TGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            G +   A E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E 
Sbjct: 372 RGPVDREAVESYQLTVEASDQGRDPGPRSATATVCLSVEDDNDNAPQFSEKRYVVQVRED 431

Query: 168 ASINSTVATITVS 180
            +  + V  +T +
Sbjct: 432 VTPGAPVLRVTAT 444



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 772 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRESYQGSIYEDVPPFT-------- 823

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 824 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 880

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T VEV V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 881 RAFAVDKGVPPARTPVEVMVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 937



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 29/179 (16%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+      +   S++V + D+NDN P     P   
Sbjct: 581 WISVAAE-LDREEVD--FYSFGVEARDHGTPPLTASASVSVTILDVNDNNPTFTQ-PEYA 636

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G LI
Sbjct: 637 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--ASGNTRNRFSITSQSG-----GGLI 687

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E
Sbjct: 688 SLALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDA---NTHRPVFQSSHYTVNVNE 743



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ ATD D G NA + YSI
Sbjct: 400 SATATVCLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTATDRDKGSNALVHYSI 458

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ ++A D GG+   +    +V V V
Sbjct: 459 --MSGNARGQFYLDAQTGALDVVSPLDYETAKEYTLRIRAQD-GGRPPLSNVSGLVTVQV 515

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  I
Sbjct: 516 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHI 547


>gi|324499461|gb|ADY39769.1| Cadherin-related tumor suppressor [Ascaris suum]
          Length = 4485

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 15/163 (9%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            K G       ++T+ + D+NDNAP +        +A   +  I  + A D D GVNAEIT
Sbjct: 1130 KDGGGRLAECNITIEVEDVNDNAPIMKA-EFYHFEAFLTKHSIGFVSAIDRDQGVNAEIT 1188

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVS 143
            YS+   +       ++D  SG +   G++ AG+ Y++T+ ATD G      S+   V V 
Sbjct: 1189 YSLVRRTT----HIKVDAASGELSHDGEIEAGKVYNLTIVATDQGQPQLSTSALVFVYVI 1244

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             +     R  V+   T ++N  E   + + +AT+T    AS C
Sbjct: 1245 ELRKCTPRFIVYPTKTIELN--ESIRLGTLIATVT----ASAC 1281



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEAT 76
            K RF V A ++   + S    + V + D NDN+P+   +   +I+   A    V +I +T
Sbjct: 2650 KRRFTVKAEDRGQPSLSQIAIVKVRILDENDNSPKFSHLFRAEIEENSAIGAFVTQISST 2709

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            D D+      +   Y + + G+  FRIDP SG++     +    Q  Y++ V+A D G  
Sbjct: 2710 DVDMS-----SVVTYELEDDGIGIFRIDPYSGIVTLISHIDRETQSEYALNVRAMD-GVW 2763

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +T + ++++   N  +P+F ++ +   V   A+++S V  I      SG
Sbjct: 2764 QVRTSLTITILD-QNDNAPIFTRDHFKFFVVNNAAVDSIVGRIEARDADSG 2813



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 9/161 (5%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQ 69
            D     ++  +V A +      S  V +TV + DINDN P   LP       +   A   
Sbjct: 2235 DYEECAEYNLKVQAIDMGTPRLSATVHITVIVEDINDNDPIFELPYYRASIRENLRADEI 2294

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            + +++ATD D G NA++ YS+          FRIDP  G++ TT  L   A   + + V 
Sbjct: 2295 VFQLKATDMDAGENAKLRYSLAEEEKI---PFRIDPVHGIVYTTAPLDREAASLWYLKVT 2351

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            A D G   + S T+  +  V   N   P    + +DV   E
Sbjct: 2352 AHDGGQFIQRSTTVSMLVTVFDDNDNPPTILNSVFDVYTPE 2392



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTG 97
            LTV ++D+NDNAP  P      I   E    IV + ++ D D G+N  + + +   +   
Sbjct: 1041 LTVYVDDVNDNAPECPQKSTFSIMENEPPHSIVGVLDSVDRDAGLNGTVFFELKERN--- 1097

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F +D   GVI TT  L       Y++TV   D GG+ ++  + +  V   N  +P+ 
Sbjct: 1098 -ENFTVDADFGVIRTTAWLDRELCATYNLTVIIKDGGGRLAECNITIE-VEDVNDNAPIM 1155

Query: 156  QQNTY 160
            +   Y
Sbjct: 1156 KAEFY 1160



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 21/188 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V +  LDR+  +  ++   + A +      S    + VN+ DINDN P       +Q +
Sbjct: 606 IVLRRVLDREYQH--RYVLTIRASDNGYPRRSSTTQVIVNVLDINDNRPHF-----LQDE 658

Query: 63  AGEARR-------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
                R       +I++IEA D+D G    I Y +Y  S  GL  F +D  SG++     
Sbjct: 659 YFCFLRKYEPPGSEIIRIEAKDSDAGRYGHINYLLYQ-SPMGL--FELDYASGILRLASH 715

Query: 116 L---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
           +   +   ++ + + A D GG  S +   V V +   NT  P F    ++V + E +   
Sbjct: 716 IDERLVETEFRVLIGAKDGGGLLSTSNASVIVQIVDNNTNVPKFALREWNVTIKENSPAG 775

Query: 172 STVATITV 179
           +++    +
Sbjct: 776 TSIGAFAI 783



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIP-PIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+ VN+ D+NDN P    I    +I +  ++   ++ + A D D  VN ++ YSI     
Sbjct: 2565 SIVVNVEDVNDNRPIFDQILYEAEISENADSETLLLNVYAVDKDASVNGDVRYSILEEDM 2624

Query: 96   TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
              L  FRI   SG I T   L A    +   TV+A D G  S   I  V V +   N  S
Sbjct: 2625 RAL--FRISENSGEIFTIVPLDADIISKRRFTVKAEDRGQPSLSQIAIVKVRILDENDNS 2682

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F    +   + E ++I + V  I+
Sbjct: 2683 PKFSH-LFRAEIEENSAIGAFVTQIS 2707



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 23/162 (14%)

Query: 38  SLTVNLNDINDNAPRLPMI---PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++ VN+ D NDNAP          +    G+ R  I+ +EA+D D+G NA I   +Y +S
Sbjct: 213 TVLVNVLDANDNAPVFEQSHYEASVTAHPGQ-RAAIITVEASDADVGENARI---LYRLS 268

Query: 95  NTGLHKFRIDPRSGVIETTGKLI-----AGEQYS-----ITVQATDTGGKSSQTIVEVSV 144
           N    +F ID  +G I    + +       EQ       I+V+A D G         V++
Sbjct: 269 NDPHKQFEIDEHNGTIFAKKEKLNCSRSGCEQNCSRICVISVEAEDQGSPKLVGHAFVNI 328

Query: 145 -VPGPNTRSPVFQQNTYDV-----NVSEGASINSTVATITVS 180
            +   N   P+     Y V     +VSE A I +T+A +TV+
Sbjct: 329 HLSDSNDYDPLIHFRMYPVGVGFASVSEDAIIGTTIAVVTVT 370



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----PMIPPIQIQAG 64
            LDR+       R  V  +       S   +LTVN+ D+NDNAP            ++  G
Sbjct: 1917 LDRESSAKHVLRITVTDQRPPHKVFSASTTLTVNVIDVNDNAPTFISSNTFFVFEEVPLG 1976

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
                 +V I+A   D G NA++ Y I  VS+     F +DP  G I+  G++   ++  +
Sbjct: 1977 TLVGIVVAIDA---DFGNNAQVQYRIIPVSHPEA-LFIVDPILGYIQVNGRVDREKKAIH 2032

Query: 123  SITVQATDTGG--KSSQTIVEVSVV 145
             +T++A+D G   ++S T + + V+
Sbjct: 2033 HLTIEASDGGSPIRTSSTNITIVVL 2057



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + L V++ D+NDN P++        +  E      KI  TD D G N  +   I +    
Sbjct: 1336 ILLQVDVRDVNDNEPQIETSLLHVKENDEPGSVCAKITVTDADSGDNGRVHLEILNQFPM 1395

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            G ++FR+D    + E          Y + ++ATD G   KS+Q +V V +V   N  +P
Sbjct: 1396 G-NEFRLDGSKLICEDVLDREHSSNYRLLLRATDYGNPAKSAQKMVMV-IVDDENDNAP 1452



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I K+ A D D G N  I+YSI  + N+    F I  ++G I     L    Q  Y +T++
Sbjct: 568 ITKVSAHDEDDGSNGLISYSI--IDNSSRRTFAIKEKTGEIVLRRVLDREYQHRYVLTIR 625

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A+D G   +SS T V V+V+   + R P F Q+ Y
Sbjct: 626 ASDNGYPRRSSTTQVIVNVLDINDNR-PHFLQDEY 659



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 37  VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEI-TYSIYHV 93
           +S+ V + DINDN P  P   +    +++     ++    ATD D G N  I +YSI   
Sbjct: 101 ISVHVTVLDINDNDPVFPSSFMNVSIVESAAIGSRVALHSATDADFGDNGTIVSYSIED- 159

Query: 94  SNTGLHKFRIDPRSG----VIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVV 145
           S +     R    SG    ++E T  L   ++  Y + V A+D G   +   + V V+V+
Sbjct: 160 SQSVFMLVRSTSHSGDDVLLLELTESLDREQKDLYVVNVSASDGGNPPRFGYSTVLVNVL 219

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              N  +PVF+Q+ Y+ +V+      + + T+  S
Sbjct: 220 DA-NDNAPVFEQSHYEASVTAHPGQRAAIITVEAS 253



 Score = 37.0 bits (84), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 16/133 (12%)

Query: 35   VPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            V  SLT+ + D NDNAP           +        + +IEA D D G N  + YS+  
Sbjct: 2765 VRTSLTITILDQNDNAPIFTRDHFKFFVVNNAAVDSIVGRIEARDADSGDNGVVFYSL-- 2822

Query: 93   VSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG--GKSSQTIVEV------ 142
                   +F +DP SG+I  +  L     E +    +A D G    ++   VE+      
Sbjct: 2823 --RCAQDRFTVDPSSGLISLSIPLGNYTNEVFMCEAEAIDGGMPALAAMATVEIIIVGNK 2880

Query: 143  SVVPGPNTRSPVF 155
             VVP    R P F
Sbjct: 2881 IVVPRFADRRPYF 2893


>gi|162138878|ref|NP_001104603.1| protocadherin alpha 3 precursor [Gallus gallus]
 gi|45790051|gb|AAS77407.1| cadherin-related neuronal receptor 3 [Gallus gallus]
          Length = 1000

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPI 59
           +LV++   LDR+  +  + R  + A +    A +  V L +++ D NDNAP+    +  +
Sbjct: 191 FLVLTHP-LDRE--SLSEHRLVLTASDGGRPALTGTVQLVISVLDANDNAPQFNQSVYKV 247

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A   +V ++ ATD D+G N E +YSI   V  +    F IDPR+G I  TG L 
Sbjct: 248 QLPEDAAEGTLVARVAATDPDVGFNQEFSYSIVSSVPASQSDAFSIDPRTGEIRLTGPLD 307

Query: 118 AGE--QYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +  Q+ + ++A D G     G  S  I+EV  V   N  +P     +  V V E A++
Sbjct: 308 FEDVHQHELQIEARDKGTPPLSGHCS-VILEVLDV---NDNAPEVWVTSLSVPVPEDAAL 363

Query: 171 NSTVATITVSRLASG------CAI 188
            + VA ++VS   SG      CA+
Sbjct: 364 GTVVALLSVSDRDSGPNGRVRCAV 387



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 41  VNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDNAPR P     I I           +E A+D D+G NA+++YS+    +  L
Sbjct: 119 VEVTDINDNAPRFPAAYKNISIAESSLPGSRFPLEGASDADIGSNAQLSYSLSPSEHFAL 178

Query: 99  HKFRIDP--RSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                D   +S  +  T  L   +  ++ + + A+D G  +    V++ + V   N  +P
Sbjct: 179 DVKSPDDNLKSLFLVLTHPLDRESLSEHRLVLTASDGGRPALTGTVQLVISVLDANDNAP 238

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F Q+ Y V + E A+  + VA +  +
Sbjct: 239 QFNQSVYKVQLPEDAAEGTLVARVAAT 265


>gi|344253926|gb|EGW10030.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Cricetulus griseus]
          Length = 2335

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 75  VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 127

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +      +    F IDPRSGVI T G
Sbjct: 128 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSEVFEIDPRSGVIRTRG 187

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 188 PVDREEVESYKLTVEASDQGRDPGPRSSTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 247

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 248 PGAPVLRVTAS 258



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 639 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 690

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 691 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYIL 747

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 748 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 804



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 419 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYT 474

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 475 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 525

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 526 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNVNED 582

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 583 RPAGTTVVLISAT 595



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 589 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 644

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 645 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 703



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 33/170 (19%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +TV + DINDNAP + +  P Q    E+      ++ ++A D D G NA + YS+  V +
Sbjct: 325 VTVQVLDINDNAP-IFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAGVGH 383

Query: 96  TGLHKFRIDPRSGVIETTGKL-------------------IAGEQ-------YSITVQAT 129
                F I+  +G I    +L                   +A E        YS  V+A 
Sbjct: 384 D--FPFTINNGTGWISVAAELDREEVDFYSFGNNGTGWISVAAELDREEVDFYSFGVEAR 441

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           D G  +      VSV +   N  +P F Q  Y V ++E A++ ++V T++
Sbjct: 442 DHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 491



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 730 IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 787

Query: 57  ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 788 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 838

Query: 113 TGKLIAGE--QYSITVQAT 129
              L   +  +Y + +QAT
Sbjct: 839 LVDLDYEDRPEYILVIQAT 857



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI  +S   
Sbjct: 221 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 277

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSVVPGPNTR 151
             +F +D ++G ++    L     ++Y++ ++A D GG+   +    +V V V+   N  
Sbjct: 278 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQD-GGRPPLSNVSGLVTVQVL-DINDN 335

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           +P+F    +   V E   +   V  +
Sbjct: 336 APIFVSTPFQATVLESVPLGYLVLHV 361


>gi|327269525|ref|XP_003219544.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
          Length = 2539

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 16/191 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
            + + E LDR+  +   +RF V+A ++ G   +    + + + D+NDNAP           
Sbjct: 1038 ITANERLDREKRS--MWRFLVLATDEDGEGLTGFADVIIEVLDVNDNAPLFLCASDGCFM 1095

Query: 58   ---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSN-TGLHKFRIDPRSGVIET 112
               P    A     +++ I+  D   G NA +TY+I   V N   L+ F ++P +G I T
Sbjct: 1096 GQIPEDSPADSTVMEMLAIDLDDPAAGKNAVLTYNIIQNVKNEINLNLFSVNPVTGTIYT 1155

Query: 113  TGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
                +  E+   Y + V+A D GG +      + +V   N  +P F Q  Y   VSEGAS
Sbjct: 1156 VLSTLDREKRDKYLVVVEAKDGGGLTGTGTATI-LVTDINDHAPAFTQKIYTAFVSEGAS 1214

Query: 170  INSTVATITVS 180
            +N+ VA ++ +
Sbjct: 1215 VNTLVAEVSAT 1225



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHV 93
           + V +NDIN+N P                 Q     ++++EA D DLG N E+ YS+ H 
Sbjct: 427 VVVGINDINNNKPIFRECAYYSDNTWVLENQPPGTYVLRVEAYDADLGQNGEVKYSLMH- 485

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +  L  F IDP SGVI TT      +Q  Y ++V ATD   +    + ++++ +   N 
Sbjct: 486 RDGSLPGFSIDPDSGVITTTRSFDREKQREYMLSVIATDQAQEPLIGMCQITIYIADEND 545

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATIT 178
             P F+ + Y   + E   + ++    T
Sbjct: 546 NDPKFENSRYQYFLREDTPVGTSFLCAT 573



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 17/175 (9%)

Query: 28  KQGTAASVPVS----LTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLG 81
           K    A++P++    + VN+ D+NDN P        + +  G      ++++ ATD D G
Sbjct: 733 KAQNVATIPLASFTTVYVNITDVNDNVPFFTSSTYEVSVPEGAGIGTSVMQVLATDADSG 792

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT-------- 131
           +N E+ YSI   S+     F ID  SGVI T       ++  Y I VQ+ D+        
Sbjct: 793 LNGEVHYSILKDSSGDYQYFTIDSTSGVISTLASFDREKRASYLIEVQSQDSSESARPGI 852

Query: 132 -GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  ++ T      +   N   P F    Y+ +V E   +   V T T +    G
Sbjct: 853 YGQPNTDTAYVRIFISDVNDNCPAFPHLVYETDVDEDQDVGYAVLTATATDKDEG 907



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 29/173 (16%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
           + F V A E++   +SV   + V++ D ND  P          Q+  +R  I+       
Sbjct: 199 YHFLVKAMERESLLSSV-TEVIVHITDENDCFPEFQ-------QSIYSRENILESIPIGT 250

Query: 72  ---KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQYSIT 125
              ++ ATD D G N+EI Y +          F I P  GVI +  +L    +   Y   
Sbjct: 251 SLLQVLATDCDSGSNSEIIYFLQTAD------FSITPE-GVISSNQQLDFEQSNHMYEFV 303

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V A D G  +      V + +   N  SPVF Q+ Y+  +SE A   + VATI
Sbjct: 304 VIAVDQGHPARTGTASVRIRMANVNDESPVFSQSVYETFLSEDAGPGTLVATI 356



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)

Query: 41  VNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           + ++D+NDN P  P ++    + +  +    ++   ATD D G NA++ Y I   +  G 
Sbjct: 865 IFISDVNDNCPAFPHLVYETDVDEDQDVGYAVLTATATDKDEGSNAKLRYQITSGNEQG- 923

Query: 99  HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK-SSQTIVEVSVVPGPNTRSPVFQQ 157
             F ++P  G I     L   ++    +Q   + GK  + T+V ++V+   N  +PVF Q
Sbjct: 924 -DFYVEPEKGTILIAQHLDYEQERHYKLQLVTSDGKWENHTLVVINVI-NINDEAPVFSQ 981

Query: 158 NTYDVNVSE 166
           + Y  +V E
Sbjct: 982 DEYHGSVLE 990



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 28/188 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ +  + DR+     ++   VIA ++          +T+ + D NDN P+         
Sbjct: 501 VITTTRSFDREKQR--EYMLSVIATDQAQEPLIGMCQITIYIADENDNDPKFE------- 551

Query: 62  QAGEARRQIVKIE------------ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV 109
               +R Q    E            A D+D G NA ITYS+          F+I+P +G 
Sbjct: 552 ---NSRYQYFLREDTPVGTSFLCATAHDDDQGANAAITYSMVQQEP---EYFKINPSTGW 605

Query: 110 IETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           +     +    Q +  + ATD G +SS   + V++    N +SP + +++Y + + E  +
Sbjct: 606 VYVNHVISQTFQINRYITATDGGNRSSTVELTVTITDVLN-QSPQWDESSYSITIPESTA 664

Query: 170 INSTVATI 177
            ++ + T+
Sbjct: 665 RDTKIVTV 672



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 23/197 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
            Y V+S   LDR+  +    ++ V+   K G   +   + T+ + DIND+AP     +   
Sbjct: 1154 YTVLS--TLDREKRD----KYLVVVEAKDGGGLTGTGTATILVTDINDHAPAFTQKIYTA 1207

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP----RSGVIETTG 114
               +       + ++ ATD D G NA +T+SI  +     HKF I+     + GVI    
Sbjct: 1208 FVSEGASVNTLVAEVSATDEDEGENAVVTFSI--LDGDDDHKFYIETDKANKCGVIRLR- 1264

Query: 115  KLIAGEQ-----YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV-NVSEGA 168
            K I  E+     +++TV+A D    S      V  V   N  +P+F    Y+V  ++E  
Sbjct: 1265 KEIDFEKPHERVFNLTVKAEDLDFFSIAHC--VIYVEDYNDHAPLFYPQFYEVAGLAEDV 1322

Query: 169  SINSTVATITVSRLASG 185
            S+ + V  +    L SG
Sbjct: 1323 SLGTKVVQVIGIDLDSG 1339


>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
            catus]
          Length = 3316

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 927  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 987  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1045

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 384 LIRTEAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFE-----QA 436

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 557 DVRPHTVVLRVTAT 570



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     +V I A+D+D+G NA ITY +       
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLL----EDN 900

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 714 LDRESVE--HYFFGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 770

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 771 VGTTVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 826

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + STV  I+ S
Sbjct: 827 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTVVVISAS 883



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    QA       A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 319 ANRHPQFPQYNYQALVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSI 378

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 379 DPLSGLIRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVT-DRNDHAPVFEQAQ 437

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 438 YRETLRENVEEGYPILQLRAT 458



 Score = 44.3 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 642 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 673



 Score = 44.3 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1050 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1164

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185


>gi|324499482|gb|ADY39779.1| Cadherin-related tumor suppressor [Ascaris suum]
          Length = 3652

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
            K G       ++T+ + D+NDNAP +        +A   +  I  + A D D GVNAEIT
Sbjct: 1130 KDGGGRLAECNITIEVEDVNDNAPIMKA-EFYHFEAFLTKHSIGFVSAIDRDQGVNAEIT 1188

Query: 88   YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV 145
            YS+   +       ++D  SG +   G++ AG+ Y++T+ ATD G    S+  +V V V+
Sbjct: 1189 YSLVRRTT----HIKVDAASGELSHDGEIEAGKVYNLTIVATDQGQPQLSTSALVFVYVI 1244

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
                         T  + ++E   + + +AT+T    AS C
Sbjct: 1245 ELRKCTPRFIVYPTKTIELNESIRLGTLIATVT----ASAC 1281



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEAT 76
            K RF V A ++   + S    + V + D NDN+P+   +   +I+   A    V +I +T
Sbjct: 2650 KRRFTVKAEDRGQPSLSQIAIVKVRILDENDNSPKFSHLFRAEIEENSAIGAFVTQISST 2709

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
            D D+      +   Y + + G+  FRIDP SG++     +    Q  Y++ V+A D G  
Sbjct: 2710 DVDMS-----SVVTYELEDDGIGIFRIDPYSGIVTLISHIDRETQSEYALNVRAMD-GVW 2763

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              +T + ++++   N  +P+F ++ +   V   A+++S V  I      SG
Sbjct: 2764 QVRTSLTITIL-DQNDNAPIFTRDHFKFFVVNNAAVDSIVGRIEARDADSG 2813



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 9/161 (5%)

Query: 12   DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQ 69
            D     ++  +V A +      S  V +TV + DINDN P   LP       +   A   
Sbjct: 2235 DYEECAEYNLKVQAIDMGTPRLSATVHITVIVEDINDNDPIFELPYYRASIRENLRADEI 2294

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            + +++ATD D G NA++ YS+          FRIDP  G++ TT  L   A   + + V 
Sbjct: 2295 VFQLKATDMDAGENAKLRYSLAEEEKI---PFRIDPVHGIVYTTAPLDREAASLWYLKVT 2351

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            A D G   + S T+  +  V   N   P    + +DV   E
Sbjct: 2352 AHDGGQFIQRSTTVSMLVTVFDDNDNPPTILNSVFDVYTPE 2392



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTG 97
            LTV ++D+NDNAP  P      I   E    IV + ++ D D G+N  + + +   +   
Sbjct: 1041 LTVYVDDVNDNAPECPQKSTFSIMENEPPHSIVGVLDSVDRDAGLNGTVFFELKERN--- 1097

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               F +D   GVI TT  L       Y++TV   D GG+ ++  + +  V   N  +P+ 
Sbjct: 1098 -ENFTVDADFGVIRTTAWLDRELCATYNLTVIIKDGGGRLAECNITIE-VEDVNDNAPIM 1155

Query: 156  QQNTY 160
            +   Y
Sbjct: 1156 KAEFY 1160



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 21/188 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V +  LDR+  +  ++   + A +      S    + VN+ DINDN P       +Q +
Sbjct: 606 IVLRRVLDREYQH--RYVLTIRASDNGYPRRSSTTQVIVNVLDINDNRPHF-----LQDE 658

Query: 63  AGEARR-------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
                R       +I++IEA D+D G    I Y +Y  S  GL  F +D  SG++     
Sbjct: 659 YFCFLRKYEPPGSEIIRIEAKDSDAGRYGHINYLLYQ-SPMGL--FELDYASGILRLASH 715

Query: 116 L---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
           +   +   ++ + + A D GG  S +   V V +   NT  P F    ++V + E +   
Sbjct: 716 IDERLVETEFRVLIGAKDGGGLLSTSNASVIVQIVDNNTNVPKFALREWNVTIKENSPAG 775

Query: 172 STVATITV 179
           +++    +
Sbjct: 776 TSIGAFAI 783



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 23/162 (14%)

Query: 38  SLTVNLNDINDNAPRLPMI---PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           ++ VN+ D NDNAP          +    G+ R  I+ +EA+D D+G NA I   +Y +S
Sbjct: 213 TVLVNVLDANDNAPVFEQSHYEASVTAHPGQ-RAAIITVEASDADVGENARI---LYRLS 268

Query: 95  NTGLHKFRIDPRSGVIETTGKLI-----AGEQYS-----ITVQATDTGGKSSQTIVEVSV 144
           N    +F ID  +G I    + +       EQ       I+V+A D G         V++
Sbjct: 269 NDPHKQFEIDEHNGTIFAKKEKLNCSRSGCEQNCSRICVISVEAEDQGSPKLVGHAFVNI 328

Query: 145 -VPGPNTRSPVFQQNTYDV-----NVSEGASINSTVATITVS 180
            +   N   P+     Y V     +VSE A I +T+A +TV+
Sbjct: 329 HLSDSNDYDPLIHFRMYPVGVGFASVSEDAIIGTTIAVVTVT 370



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIP-PIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            S+ VN+ D+NDN P    I    +I +  ++   ++ + A D D  +N ++ YSI     
Sbjct: 2565 SIVVNVEDVNDNRPIFDQILYEAEISENADSETLLLNVYAVDKDASLNGDVRYSILEEDM 2624

Query: 96   TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
              L  FRI   SG I T   L A    +   TV+A D G  S   I  V V +   N  S
Sbjct: 2625 RAL--FRISENSGEIFTIVPLDADITSKRRFTVKAEDRGQPSLSQIAIVKVRILDENDNS 2682

Query: 153  PVFQQNTYDVNVSEGASINSTVATIT 178
            P F    +   + E ++I + V  I+
Sbjct: 2683 PKFSH-LFRAEIEENSAIGAFVTQIS 2707



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 12/120 (10%)

Query: 34   SVPVSLTVNLNDINDNAPRL----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            S   +LTVN+ D+NDNAP            ++  G     +V I+A   D G NA++ Y 
Sbjct: 1942 SASTTLTVNVIDVNDNAPTFISSNTFFVFEEVPLGTLVGIVVAIDA---DFGNNAQVQYR 1998

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVV 145
            I  VS+     F +DP  G I+  G++   ++  + +T++A+D G   ++S T + + V+
Sbjct: 1999 IIPVSHPEA-LFIVDPILGYIQVNGRVDREKKAIHHLTIEASDGGSPIRTSSTNITIVVL 2057



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            + L V++ D+NDN P++        +  E      KI  TD D G N  +   I +    
Sbjct: 1336 ILLQVDVRDVNDNEPQIETSLLHVKENDEPGSVCAKITVTDADSGDNGRVHLEILNQFPM 1395

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            G ++FR+D    + E          Y + ++ATD G   KS+Q +V V +V   N  +P
Sbjct: 1396 G-NEFRLDGSKLICEDVLDREHSSNYRLLLRATDYGNPAKSAQKMVMV-IVDDENDNAP 1452



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           I K+ A D D G N  I+YSI  + N+    F I  ++G I     L    Q  Y +T++
Sbjct: 568 ITKVSAHDEDDGSNGLISYSI--IDNSSRRTFAIKEKTGEIVLRRVLDREYQHRYVLTIR 625

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A+D G   +SS T V V+V+   + R P F Q+ Y
Sbjct: 626 ASDNGYPRRSSTTQVIVNVLDINDNR-PHFLQDEY 659



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 37  VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEI-TYSIYHV 93
           +S+ V + DINDN P  P   +    +++     ++    ATD D G N  I +YSI   
Sbjct: 101 ISVHVTVLDINDNDPVFPSSFMNVSIVESAAIGSRVALHSATDADFGDNGTIVSYSIED- 159

Query: 94  SNTGLHKFRIDPRSG----VIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVV 145
           S +     R    SG    ++E T  L   ++  Y + V A+D G   +   + V V+V+
Sbjct: 160 SQSVFMLVRSTSHSGDDVLLLELTESLDREQKDLYVVNVSASDGGNPPRFGYSTVLVNVL 219

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              N  +PVF+Q+ Y+ +V+      + + T+  S
Sbjct: 220 DA-NDNAPVFEQSHYEASVTAHPGQRAAIITVEAS 253



 Score = 36.6 bits (83), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 16/133 (12%)

Query: 35   VPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            V  SLT+ + D NDNAP           +        + +IEA D D G N  + YS+  
Sbjct: 2765 VRTSLTITILDQNDNAPIFTRDHFKFFVVNNAAVDSIVGRIEARDADSGDNGVVFYSL-- 2822

Query: 93   VSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG--GKSSQTIVEV------ 142
                   +F +DP SG+I  +  L     E +    +A D G    ++   VE+      
Sbjct: 2823 --RCAQDRFTVDPSSGLISLSIPLGNYTNEVFMCEAEAIDGGMPALAAMATVEIIIVGNK 2880

Query: 143  SVVPGPNTRSPVF 155
             VVP    R P F
Sbjct: 2881 IVVPRFADRRPYF 2893


>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus
            griseus]
          Length = 3288

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 893  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 952

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 953  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1011

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1012 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1056



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 350 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 402

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
              E  R+       I+++ ATD D   NA + Y         +     F IDPRSG+I 
Sbjct: 403 HYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPRSGLIS 462

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 463 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNTPQFSEKRYVAQVRE 522

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 523 DVRPHTVVLRVTAT 536



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 843 VVVISASDDDVGENARITYLL----EDNLPQFRIDANSGAITLQAPLDYEDQVTYTLAIT 898

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 899 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 952



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 680 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 736

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 737 VGTSVVSVTAVDRD--ANSAISYQI--TGGNSRNRFAISTQGGVGLVTLALPLDYKQERY 792

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 793 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 849



 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 285 ANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSI 344

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 345 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAH 403

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 404 YRETLRENVEEGYPILQLRAT 424



 Score = 44.3 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1016 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1072

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1073 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1130

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1131 NSPVLNNFQILFNNYVSNRSD 1151



 Score = 41.6 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDN P+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 492 SATVRVHITVL--DENDNTPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 549

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y + ++A D G    S+ T +    V
Sbjct: 550 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQV 607

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 608 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 639


>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Metaseiulus occidentalis]
          Length = 4957

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
            +V  E LDR+       + Q+  R   G   S   ++ + + D NDN+P     +    I
Sbjct: 1799 IVLVEQLDRELAA----QHQLTVRVSDG-VQSCETNVDITVLDTNDNSPVFSHSMFSFDI 1853

Query: 62   QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
                 R  +I  + ATD D+G N +++YS+  +S+ G   F ++P++GV   T  L   +
Sbjct: 1854 PEDTPRGHKIGSVRATDADIGQNGQVSYSV--LSDWGNDLFSLNPQTGVFTLTSNLDYEQ 1911

Query: 121  --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y   V A D G  S  + V V + V   N  SPVF   +Y   V E A +N+TV ++
Sbjct: 1912 YQHYIFVVSAQDAGVPSLSSTVTVYMNVIDFNDNSPVFDPLSYTAEVREDAPLNTTVLSV 1971

Query: 178  TVSRLASG 185
              S L SG
Sbjct: 1972 HASDLDSG 1979



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 9/169 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
            LDR+  +  +++  V+A+++     S   ++ V++ D NDN+P         +  +    
Sbjct: 2117 LDRELKS--EYQIIVVAKDRGKPPLSATTTIIVHVLDENDNSPVFEQRQYEAVMSENSPV 2174

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
             + ++K+ ATD D+G +  I YSI  V+    H F ID  +GVI    ++    +  Y I
Sbjct: 2175 EKSVIKVSATDFDVGPSGLIRYSI--VAGDPNHDFSIDEETGVIRVHKQVDYERKNRYVI 2232

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
            TVQA D+  ++      +S+ +   N   P F  N Y+ ++ E A I S
Sbjct: 2233 TVQAEDSSTEARHDTCMISITLKDVNDNPPTFLDNPYEASIVENAIIPS 2281



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 24   IAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATDNDLG 81
            I  E   +  S    L V + D+NDN+P     +  + +   +A  + V ++ ATD D G
Sbjct: 2651 IQAENINSKLSAATELQVRVQDVNDNSPMCSQAVFNVTVMEEQAPPEFVAQVHATDADEG 2710

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTI 139
             N ++ Y    V+ T L  F I+  +G + T  KL      +Y + VQA D G  ++   
Sbjct: 2711 TNGDVFYQFESVAETSL--FSIESDTGKVFTRSKLDRETMSRYRLIVQAVDRGFPANTGT 2768

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              V V V   N  SP F +  +  NVSE A+I + V  +T
Sbjct: 2769 CTVMVEVADKNDNSPRFTR-LFSANVSEDATIGTFVIQMT 2807



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKI 73
           +    +A +K   + S    L + +ND+ND+ P+       ++    +  G     +V +
Sbjct: 427 YNLTFVATDKGTPSRSTIKFLIIRVNDVNDHEPQFEKSEYSVVLSETVNVGS---YVVAV 483

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            ATD D GVNA + Y I   S    H F ID ++G++ T   L   EQ    + + A D 
Sbjct: 484 SATDEDTGVNALVFYGIE--SGNDRHWFAIDKKTGLVTTVEILNREEQDLVELKIYAHDG 541

Query: 132 G--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           G   K + T +++  +   N  +P F  N  +V +SE A+ ++ V  IT +
Sbjct: 542 GPNRKFAYTTLKIH-IQDENDEAPAFVMNHLNVTLSENATPHALVTQITAT 591



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 22/189 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----PMIPPIQI 61
            KE LD +  +   +   V AR+      S  V LT+++ D NDN PR      ++  I +
Sbjct: 1052 KEALDHE--HHDFYVLVVTARDNGARPRSSSVPLTIHIIDDNDNVPRFVPNGNLVFSI-V 1108

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-----KL 116
            +  E    +  + A D D G NAE+TY++    ++    F +DPRSGVI +       KL
Sbjct: 1109 ENQEPDSFVGILVAEDADSGRNAELTYAL----SSDQTDFAVDPRSGVIRSLKSFDREKL 1164

Query: 117  IAGEQYS-ITVQA--TDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
            +    +  ITV+A  +D G     S+T + V V+   N   PVF +  Y   +SE    N
Sbjct: 1165 VETMSHDYITVEASVSDNGNPRLKSETRIVVHVL-DENDNPPVFSRKVYKSPISESTPAN 1223

Query: 172  STVATITVS 180
            + +A ++ +
Sbjct: 1224 TQIARVSAT 1232



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            V ++  LDR+     ++R  V A ++   A +   ++ V + D NDN+PR   +    + 
Sbjct: 2737 VFTRSKLDRE--TMSRYRLIVQAVDRGFPANTGTCTVMVEVADKNDNSPRFTRLFSANVS 2794

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AG 119
            +       ++++ + D+D+G NA  TYS+    N G  KF IDP SG +   G L     
Sbjct: 2795 EDATIGTFVIQMTSIDSDIGQNAIATYSLNE--NPG-GKFAIDPVSGNVTVAGSLDRELK 2851

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++Y++ V   D G     T + ++V    N  SP F +  Y   ++E   I S V  I
Sbjct: 2852 DEYNLKVTVFD-GAWKKDTPLTITVT-DVNDNSPQFGKTEYTFYLAEKQVIQSYVGLI 2907



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 12/136 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +L ++++D NDNAP     P  +I   E   A   I KI ATD+D G+NA + Y++   S
Sbjct: 2357 TLILSVSDRNDNAPVFEK-PFYEIHVSENLPADTFIAKITATDSDQGLNALLRYTLKEPS 2415

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKSSQTIVEVSV-VPGPNT 150
                  F +DP++GV+         +   + + V  TD+G      T V V V +   N 
Sbjct: 2416 GW----FELDPQTGVLIAKRSFDREKHASFDLEVNCTDSGLAIKKWTAVSVRVLIDDVND 2471

Query: 151  RSPVFQQNTYDVNVSE 166
             +P F ++ Y + V E
Sbjct: 2472 NAPEFHRSIYSIKVDE 2487



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 17/171 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR 67
           LDR+      ++  VIA++    + S  V+++V++ D+NDN P L P I   Q+++G   
Sbjct: 632 LDRE--RCAFYQLTVIAKDNGQPSLSSTVNVSVHVADVNDNRPILYPSIYFHQVRSGIKP 689

Query: 68  RQI-VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
                ++ A+D D GVNA I +SI    N    +F+I+  +G I  T  L   +Q  Y I
Sbjct: 690 GAFSTRVYASDADEGVNARIVFSIV---NGAEDRFKINDATGEILNTRVLDTRQQARYEI 746

Query: 125 TVQATDT-------GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TV AT+         GK++ T + V  V     R    + N Y   +SE +
Sbjct: 747 TVSATNKEPLDGLLEGKATSTAMVVVFVRDAAFRESQAEGN-YSFKISESS 796



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 38  SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +L +++ D ND AP   M  +     +       + +I ATDNDLG N  ++Y++   S+
Sbjct: 551 TLKIHIQDENDEAPAFVMNHLNVTLSENATPHALVTQITATDNDLGPNGTVSYALQ--SS 608

Query: 96  TGLH---KFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGP 148
             L     F IDP SG I TT   +  E+   Y +TV A D G  S  + V VSV V   
Sbjct: 609 VKLQYGDMFEIDPLSGRI-TTAMALDRERCAFYQLTVIAKDNGQPSLSSTVNVSVHVADV 667

Query: 149 NTRSPVFQQNTYDVNVSEG 167
           N   P+   + Y   V  G
Sbjct: 668 NDNRPILYPSIYFHQVRSG 686



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 5/119 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KIEAT 76
            +   + A +    + S  +   + L D+NDNAP  P    ++ ++ G A   +V  + AT
Sbjct: 1383 YALNITAADGGSPSLSTSIVFQLKLTDVNDNAPVFPNGAIVRTVREGIASDTMVASVVAT 1442

Query: 77   DNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            D DL  N++I+YS+   V +T    FRI   +G I T  ++     + Y +T+ ATD G
Sbjct: 1443 DRDLKQNSKISYSLTGQVPHTEPFHFRIKAETGQIYTAREIDREFTDTYKLTITATDHG 1501



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 15/169 (8%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAP----RLPMIP-PIQIQAGEARRQIVKIEA 75
             Q++A +    A +   ++ VN+ D N NAP    +   +P P  +  G +   ++++EA
Sbjct: 2964 LQIVATDYGKPALTGETTVIVNIMDSNSNAPVFVEKSYFVPVPESLSVGTS---LIQVEA 3020

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTG 132
            T  D  ++AE+ + +   + T L    +D  +G I T  K +    G+ + I + A+D+ 
Sbjct: 3021 TSKDEHLDAEVQFHVAGGNGTDL--IELDAHTGWI-TLAKAVRDRFGDVFEIELAASDSR 3077

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                ++ V V++ +   N  +P F   +Y ++V+E   + + + TI  S
Sbjct: 3078 APLKRSFVTVTIRITQENKNAPSFSSASYQISVAENEPVGNELLTIQAS 3126



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 20/176 (11%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNL--NDINDNAPRL-------PMIPPIQIQAGEARR 68
            ++   VIA +    A+      T+NL   D NDN P           IP    +  E   
Sbjct: 1274 EYSLTVIASDAAPMASRRFAVATLNLIILDENDNFPVFNASTHESKEIP----EDTEIGA 1329

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSIT 125
            +I +  A D DLG+N E++YSI   +      FRID  +GV+    K +  EQ   Y++ 
Sbjct: 1330 EIYQFSAEDMDLGLNGEVSYSI--SAGNIRDAFRIDAITGVLR-VNKALDFEQKSSYALN 1386

Query: 126  VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + A D G  S S +IV    +   N  +PVF        V EG + ++ VA++  +
Sbjct: 1387 ITAADGGSPSLSTSIVFQLKLTDVNDNAPVFPNGAIVRTVREGIASDTMVASVVAT 1442



 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 39   LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +++ + D+ND  P    P    I ++       I+ ++A D D G N+ I YS    S +
Sbjct: 2042 VSIVIQDVNDITPHFVSPNTSSI-VENAPLNTIIMAVKAVDGDEGRNSHIEYSFASRSES 2100

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS 152
                F I P  G++    +L      +Y I V A D G    S+ T + V V+   N  S
Sbjct: 2101 ---LFSIGPVDGLLRVNSELDRELKSEYQIIVVAKDRGKPPLSATTTIIVHVL-DENDNS 2156

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            PVF+Q  Y+  +SE + +  +V  ++ +    G
Sbjct: 2157 PVFEQRQYEAVMSENSPVEKSVIKVSATDFDVG 2189



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 23/163 (14%)

Query: 39  LTVNLN--DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
           L VN+   D NDN P         +   E   A  +++++ A+D D G NA I+YS+   
Sbjct: 217 LIVNITVLDTNDNPPIFDH-SAYSVSMNESLPAGHRVLQVHASDADAGDNARISYSLAES 275

Query: 94  SNTGLHKFRIDPRSGVIETT-GKLIAGEQYS---------ITVQATDTGG--KSSQTIVE 141
           +    ++F ID  +GVI T    +I G   +         +TV A D G   +  +T V 
Sbjct: 276 NAKQANQFSIDQHTGVISTNFDNIICGANRASGSVNKSCVLTVYARDNGSPRQDGRTYVT 335

Query: 142 VSVVP----GPNTRSPVF-QQNTYDVNVSEGASINSTVATITV 179
           V++V      P     VF + +  D  V E A  N  VA I+V
Sbjct: 336 VNLVDTNDHDPQITFRVFGEASVTDATVDENAERNQVVAAISV 378



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)

Query: 39  LTVNLNDINDNAPRLPM-------IPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSI 90
           +TVNL D ND+ P++         +    +     R Q+V  I   D D G+N E   S+
Sbjct: 334 VTVNLVDTNDHDPQITFRVFGEASVTDATVDENAERNQVVAAISVVDGDDGLNGETELSL 393

Query: 91  YHVSNTGLHKFRIDPRSGV--IETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-V 145
              +   +  FR+D       +   G L   +   Y++T  ATD G  S  TI  + + V
Sbjct: 394 --SAGNDMKHFRLDNEQTFYTVRVDGVLDREKVPWYNLTFVATDKGTPSRSTIKFLIIRV 451

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              N   P F+++ Y V +SE  ++ S V  ++ +   +G
Sbjct: 452 NDVNDHEPQFEKSEYSVVLSETVNVGSYVVAVSATDEDTG 491



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 20/154 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE-----KQGTAASVPVSLTVNLNDINDNAPRLPM- 55
            ++++K + DR+      F  +V   +     K+ TA    VS+ V ++D+NDNAP     
Sbjct: 2426 VLIAKRSFDRE--KHASFDLEVNCTDSGLAIKKWTA----VSVRVLIDDVNDNAPEFHRS 2479

Query: 56   IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            I  I++ + G     +   +A D D+G+N+ + YS+   S   +  F ++P +GV++   
Sbjct: 2480 IYSIKVDETGVEGGFVFGGQAHDADIGLNSMVEYSL---SGPDVDFFVVEPTTGVVKQRK 2536

Query: 115  KLIAGEQ--YSITVQATDTGG--KSSQTIVEVSV 144
              +A  Q  Y   + A+D G    SS  I+ V V
Sbjct: 2537 PWMADRQSPYEFRLIASDKGQPPMSSNAILRVRV 2570



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-IVKIEATD 77
            ++  + A +    A +   +LT+ + D+NDNAP    +    +     R   I+ + ATD
Sbjct: 1491 YKLTITATDHGEPALTSEKALTLVIEDVNDNAPSFISVGTAVLPVPANRSHSIMAVTATD 1550

Query: 78   NDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQYSITVQ 127
             D G N +++Y +      G+H  F +D  +G I     L+   Q+ ++ Q
Sbjct: 1551 PDAGTNGQVSYELV----GGIHHLFDLDRMTGEILLKQNLLPTSQFDVSYQ 1597



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 17/167 (10%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEIT-YS 89
           + PV + + + D+NDN+P+ P  P + +Q  E+    ++I    ATD D+G N   + Y 
Sbjct: 99  TYPVEVRIVVLDVNDNSPQFPE-PSLAVQLSESSAINKKIFLTTATDRDIGNNGITSKYR 157

Query: 90  IYHVSNTGLHKFRI--DPRSG-----VIETTGKLI--AGEQYSITVQATDTGG--KSSQT 138
           I   +  G    R   DP +       +ET   L     E Y + + A D G        
Sbjct: 158 IVGGNEDGKFDLRTSNDPNTFSVVFLYLETVATLDREQKEFYRLNISAEDGGNPPMHGYL 217

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           IV ++V+   N   P+F  + Y V+++E       V  +  S   +G
Sbjct: 218 IVNITVL-DTNDNPPIFDHSAYSVSMNESLPAGHRVLQVHASDADAG 263



 Score = 38.9 bits (89), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 14/152 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE-------ARRQIVKIEATDNDLGVNAEITYSIY 91
            +++ L D+NDN P   +  P +    E           I +++A D D   N  I Y + 
Sbjct: 2250 ISITLKDVNDNPPTF-LDNPYEASIVENAIIPSGGGLLITQMQAVDVDADSNRNIYYRLL 2308

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG-KSSQTIVEVSVVPGP 148
               +  L  FR++  +G +     L   +Q  Y+ TV A D+G  + + T   +  V   
Sbjct: 2309 D-GDKAL--FRVNSSNGNVYAMRSLDREQQSEYTATVLAIDSGTPRLTGTGTLILSVSDR 2365

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N  +PVF++  Y+++VSE    ++ +A IT +
Sbjct: 2366 NDNAPVFEKPFYEIHVSENLPADTFIAKITAT 2397



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 12/165 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
            F  ++ A + +       V++T+ +   N NAP        QI   E      +++ I+A
Sbjct: 3067 FEIELAASDSRAPLKRSFVTVTIRITQENKNAPSFSS-ASYQISVAENEPVGNELLTIQA 3125

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            +D D GVN ++ +SI    N     F ID  SG++     L     + YS+ V   D   
Sbjct: 3126 SDPDEGVNGQLAFSIEANGN-----FAIDKHSGIVTLNESLDFETAQGYSLKVAVRDLAF 3180

Query: 134  KS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             S S  +    VV   N  +P F  N +   + E   +++ ++ +
Sbjct: 3181 NSFSAFVTLTVVVTDVNDCAPRFSANEFHAYIHENEPVDTEISKL 3225



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 18/139 (12%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IV 71
             + F V A++    + S  V++ +N+ D NDN+P   +  P+   A E R        ++
Sbjct: 1914 HYIFVVSAQDAGVPSLSSTVTVYMNVIDFNDNSP---VFDPLSYTA-EVREDAPLNTTVL 1969

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A+D D G N EI+Y+I    +    +FRI   +G I TT  L       Y++ V A 
Sbjct: 1970 SVHASDLDSGPNGEISYTILEGDDD--QQFRIS-ENGRIITTRALDRETRSHYNLIVSAE 2026

Query: 130  DTGGKSSQ---TIVEVSVV 145
            D      Q   +I +VS+V
Sbjct: 2027 DRAANPRQRLSSIAQVSIV 2045



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 13/186 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            ++VSK   D +      F  +V+A    GT       LTV++   N+  P+       + 
Sbjct: 3258 VLVSKAIFDFE--QQAAFELEVVA-SNPGTVQFTSTKLTVHVLGRNEFYPKFTQ-RIFEF 3313

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            QA E+    + +  I A D D G +  + Y +   +N     F++D R+G I    K   
Sbjct: 3314 QASESDPVGKFVGNITAIDEDAGEDGVVLYFLVGANNE--RGFKVDTRTGAISVARKPDR 3371

Query: 119  GEQYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
              +  + + A    G S         +V ++       PVF ++ Y+V V E   ++  V
Sbjct: 3372 ENEARVVLTAIAKNGGSIRGNDTDEAQVVILIQDGNDPPVFSKSLYEVKVPEDVDLDHYV 3431

Query: 175  ATITVS 180
             T++ +
Sbjct: 3432 VTVSAT 3437


>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos taurus]
          Length = 3314

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 925  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 984

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 985  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1043

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1044 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1088



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+  +  +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 382 LIRTEAALDRESMD--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 434

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 435 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAADAFEIDPRSGLIS 494

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 495 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 554

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 555 DVRPHTVVLRVTAT 568



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 720 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDATVGTSVVSVTA 778

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 779 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 834

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+V+E   + STV  I+ S
Sbjct: 835 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTVVVISAS 881



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     +V I A+D+D+G NA ITY +       
Sbjct: 844 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLL----EDN 898

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 899 LPQFRIDTDSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 957

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 958 QFVASHYTGLVSEDAPPFTSVLQISAT 984



 Score = 45.8 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 15/137 (10%)

Query: 54  PMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRS 107
           P  P    QA       A   ++++ A D D G    + YS+  + N+  L  F IDP+S
Sbjct: 321 PQFPQYNYQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLELFSIDPQS 380

Query: 108 GVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY--- 160
           G+I T   L   + +++ + V A D G    S+ T+V V+V    N  +PVF+Q  Y   
Sbjct: 381 GLIRTEAALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQYRET 439

Query: 161 -DVNVSEGASINSTVAT 176
              NV EG  I    AT
Sbjct: 440 LRENVEEGYPILQLRAT 456



 Score = 44.3 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 524 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 581

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 582 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 639

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 640 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 671



 Score = 43.9 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1048 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1104

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1105 VEGNIPELFQMDIFSGELTALIDLDYEARQEYIIVVQAT-SAPLVSRATVHVRLV-DQND 1162

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1163 NSPVLNNFQILFNNYVSNRSD 1183


>gi|194748038|ref|XP_001956456.1| GF24581 [Drosophila ananassae]
 gi|190623738|gb|EDV39262.1| GF24581 [Drosophila ananassae]
          Length = 2191

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 6   KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
           ++NLDR+  +   F   V A +          ++ VN+ DINDN P   M      +  E
Sbjct: 727 EKNLDRE--SISLFNLTVKAEDYGIPKLHSIATVVVNILDINDNPPEFSM-RQYSCKVFE 783

Query: 66  ARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGE 120
              Q   + K+ A   D+GVNA+I Y I   +  G  KF +D  SG +     L     +
Sbjct: 784 NATQGTDVCKVYAASIDIGVNADIRYYIMSGNEQG--KFSMDSMSGHLTLNASLDYEMSK 841

Query: 121 QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y +T+QA D G    S+   V VS++   N  SP FQQN Y VN++E   + S +  + 
Sbjct: 842 FYFLTIQAIDGGTPPLSNNAHVNVSIL-DINDNSPKFQQNLYRVNINEDVLVGSKILDVN 900

Query: 179 VS 180
            +
Sbjct: 901 AT 902



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 18   KFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIE 74
            KF F  I     GT   S    + V++ DINDN+P+    +  + I        +I+ + 
Sbjct: 841  KFYFLTIQAIDGGTPPLSNNAHVNVSILDINDNSPKFQQNLYRVNINEDVLVGSKILDVN 900

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
            ATD D  VN  +TYSI    + G  +F ID ++G I  +  L       Y++ +QA D G
Sbjct: 901  ATDEDSDVNGLVTYSIERGDHIG--QFSIDRKNGTIAISRPLDRETISHYNLEIQACDQG 958

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  +V V+V V   N  +P+F    Y + + E   +     T  VS
Sbjct: 959  APQRCNLVPVNVNVLDTNDNAPLFSNANYSIMLQENRPLGYVFLTFKVS 1007



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
           +   VIA + + TA +   ++ +++ DINDN P   + P   I   E+     ++V+I+A
Sbjct: 535 YNLSVIATDGKFTATA---NVEIDVMDINDNMP-FCLKPRYHITTNESTPIGTRLVEIKA 590

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            D DL          +++S  G   F I   SG+++    L      +Y +     D   
Sbjct: 591 VDLDLQSKLR-----FYLSGKGADDFAIGKESGILKVASALDRETNAKYKLIAHVQDGKD 645

Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            S +   E+ + V   N   PVF  N Y V+V E A +N+ +  +
Sbjct: 646 FSQECFSEIIITVTDVNDNIPVFSMNQYRVSVPEDAQLNTLITKV 690



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 20  RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
           ++++IA  + G   S      + + + D+NDN P   M      +P    +  +    I 
Sbjct: 633 KYKLIAHVQDGKDFSQECFSEIIITVTDVNDNIPVFSMNQYRVSVP----EDAQLNTLIT 688

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
           K+ A D D G+N +I YS+   ++     FRI   +G+I+    L   +   +++TV+A 
Sbjct: 689 KVHAVDKDFGINRQIKYSLMGENHDF---FRISKTTGIIKLEKNLDRESISLFNLTVKAE 745

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           D G     +I  V V +   N   P F    Y   V E A+  + V  +  + +  G
Sbjct: 746 DYGIPKLHSIATVVVNILDINDNPPEFSMRQYSCKVFENATQGTDVCKVYAASIDIG 802



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 17/166 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           ++ S+   DR+     K  ++V+ +   G       +L V++ D+NDN P  P+     +
Sbjct: 106 VITSRVTFDREK----KDDYEVLLKVSDGGGLFGFATLKVSIVDVNDNVPYFPLKEYKIV 161

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS----NTGLHKFRIDPRSGVI---ET 112
              A E+ + I+ ++A D+D+  N  I Y I   S      GL   +I+  +G I     
Sbjct: 162 LSTATESNKTILTVKAKDDDIKENGAINYKIVQKSIDEELNGL--IQINENNGNIVLKRE 219

Query: 113 TGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            G   AG  Y   V+A+D G     + V VS+ +   +T  PVF++
Sbjct: 220 PGNYGAG-SYQFFVRASDGGDPKFHSEVPVSIEIIETDTAIPVFEK 264



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)

Query: 22  QVIAREKQGT--------AASVPV-----SLTVNLNDINDNAPRLP-MIPPIQI-QAGEA 66
           Q + RE Q +         A+VPV      + +++ND NDN P+       + + +  E 
Sbjct: 315 QTLDREHQDSHHLIVVAETATVPVLFAYADVLIDVNDENDNYPKFDNTFYSVSVAENSEK 374

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
              +VK+ ATD D G N  I Y +   S    + F ID  +G I T   L+  E   +Y+
Sbjct: 375 VNSLVKVSATDADAGPNGNIRYYLESDSENIQNIFDIDIYTGWI-TLLTLLDREVQSEYN 433

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             V A+D G       V V++ +   N  +P F+     ++V E A
Sbjct: 434 FKVIASDNGRPKHDAKVPVTIKIVDYNDNAPAFKLPIERLSVLENA 479



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSIT 125
             ++ + ATD D G  + + Y I  VS      F ID  +GVI +  T      + Y + 
Sbjct: 67  HNVITVTATDGDFGPYSNLYYEI--VSEEMKKFFVIDQTTGVITSRVTFDREKKDDYEVL 124

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ +D GG      ++VS+V   N   P F    Y + +S     N T+ T+
Sbjct: 125 LKVSDGGGLFGFATLKVSIV-DVNDNVPYFPLKEYKIVLSTATESNKTILTV 175


>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
          Length = 3301

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y       V       F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFGEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 705 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 761

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 762 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 817

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 818 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 310 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSI 369

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 370 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 428

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 429 YRETLRENVEEGYPILQLRAT 449



 Score = 43.9 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176



 Score = 43.5 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFGEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 633 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 664


>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
          Length = 3109

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 848  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 907

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 908  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 966

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 967  PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1011



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 305 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 357

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
              E  R+       I+++ ATD D   NA + Y         +     F IDPRSG+I 
Sbjct: 358 HYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPRSGLIS 417

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 418 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNTPQFSEKRYVAQVRE 477

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 478 DVRPHTVVLRVTAT 491



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 798 VVVISASDDDVGENARITYLL----EDNLPQFRIDANSGAITLQAPLDYEDQVTYTLAIT 853

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 854 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 907



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 635 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 691

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 692 VGTSVVSVTAVDRD--ANSAISYQI--TGGNSRNRFAISTQGGVGLVTLALPLDYKQERY 747

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 748 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 804



 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 240 ANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSI 299

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 300 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAH 358

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 359 YRETLRENVEEGYPILQLRAT 379



 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 971  PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1027

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1028 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1085

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1086 NSPVLNNFQILFNNYVSNRSD 1106



 Score = 41.6 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDN P+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 447 SATVRVHITVL--DENDNTPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 504

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y + ++A D G    S+ T +    V
Sbjct: 505 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQV 562

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 563 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 594


>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
            [Acromyrmex echinatior]
          Length = 3467

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 21/194 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLP------ 54
            +V   ++LDR+         Q +    QGT   + + SL VN+ DINDN P         
Sbjct: 1953 IVTLAKSLDRETKAMYNVTIQAL---DQGTPQLMGIASLIVNVQDINDNPPEFASKLYFA 2009

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             +P I     E    + ++ AT  D GVNA+I YSI  V      KF+ID ++GV+    
Sbjct: 2010 KVPEIYAVGTE----VARVLATSKDTGVNADIYYSI--VGGNEHKKFQIDAKTGVLTIAE 2063

Query: 115  KLIA--GEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            +L       Y +T+QA D G    S+   V ++V    N  +P+F + +Y   V E A  
Sbjct: 2064 QLDYERARDYFLTIQAIDGGIPPLSNHATVNITVTDS-NDNAPIFSEVSYRAFVREDAKT 2122

Query: 171  NSTVATITVSRLAS 184
               V  I  + L S
Sbjct: 2123 GEKVTQIYANDLDS 2136



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           + + + DIND+ P        +QI A  A  + + ++ A D D+G N  I YSI      
Sbjct: 17  VVITVADINDHGPEFEQKFYTVQIPASPANDKPLFQVLAYDQDIGDNGRIQYSI--KGGR 74

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS-- 152
           G  KF+I P +G++ +     AG++Y + ++ATD G   +S QT V V VV  P      
Sbjct: 75  GKGKFKIHPTTGMVYSQRGFEAGQEYEMMIRATDHGEPQRSHQTRVSVQVVEAPKESENP 134

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           PVF+ N   V ++E       VA +
Sbjct: 135 PVFKTNNQSVEITESDEEGFLVALV 159



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+     K+      +++          L + ++D+NDNAP+  M       P  ++ 
Sbjct: 1856 LDRE--TQAKYSLTAHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMSTYSSTLPEDVEI 1913

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATD+D+G+N +I Y    + +   H F I   SG++ T  K +  E   
Sbjct: 1914 GTL---VTKVHATDDDIGINRKIRYEF--IDSADGH-FLIAADSGIV-TLAKSLDRETKA 1966

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G      I  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 1967 MYNVTIQALDQGTPQLMGIASLIVNVQDINDNPPEFASKLYFAKVPEIYAVGTEVARVLA 2026

Query: 180  SRLASG 185
            +   +G
Sbjct: 2027 TSKDTG 2032



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 11/158 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ +   D+ND  P         I   EA      ++++ + DND G+N ++
Sbjct: 1046 GVYAEVLVSILIL--DVNDCPPEFTQ-DSYNISVSEAAVFGTPVLRVNSRDNDTGINQQV 1102

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEV 142
             Y+I + +      F IDP  GVI     L   + E +  TV A D G    SS   V +
Sbjct: 1103 RYAIQNDTEDSTDLFHIDPDEGVIFLKRSLDHESHESHHFTVIAMDRGVPSLSSTAHVWM 1162

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            SV+   N   P F+Q +Y   +SE A     V  +T S
Sbjct: 1163 SVI-DMNDNPPKFEQPSYTCFLSEHAERGQFVTVVTAS 1199



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 47   NDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            N + P+ P  P +++   E +   R +  + A D D G    +TY+I  +S      F I
Sbjct: 1269 NRHNPKFPN-PIVEVTVLENQLPGRLVTSVLAVDEDFGEYGTVTYAI--MSEMMKEIFEI 1325

Query: 104  DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            +  +G I T  KL   EQ  Y I V ATD GG+S   +V V  +   N  +PVF    Y 
Sbjct: 1326 NKLTGEIVTRKKLDREEQKRYEIPVMATDGGGRSGFVMVRVK-IGDENDNAPVFLLREYK 1384

Query: 162  VNVSEGASINSTVATI 177
              +    S+N+    I
Sbjct: 1385 ATIQGNLSLNTPFLKI 1400



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDND 79
            V+A        +    +T+ + D ND+AP+     P  I   E   +   I+K+ A D D
Sbjct: 1556 VLAETDSSPPLTALAEITLQVLDENDHAPKFES-NPYAISLAENIEEGTSILKVIAHDKD 1614

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N E+ YS         + F +D  +G I T  +L   +Q  Y   V ATD G     
Sbjct: 1615 LGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVVATDNGNPKHF 1674

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                V V +   N  +P F  + Y+  V+E A
Sbjct: 1675 ARTSVHVKLKDYNDNAPAFVDDRYEATVNEDA 1706



 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 27  EKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
           + QGT A    + + V ++D ND+AP   +   IQ +  E+      +V++ A D D G 
Sbjct: 315 KDQGTPAKRNYARVIVTVHDHNDHAPEF-ISEIIQGKVYESSPIGTAVVQVCAIDRDRGE 373

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTI 139
           NA+ITYSI    N G + F IDP  G I    +L   I+ E Y + V+ATD G  +    
Sbjct: 374 NAKITYSITS-GNVG-NVFTIDPDLGFIRVARELDLSISSE-YILLVKATDHGSPALANT 430

Query: 140 VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V V V V   +   P F Q      + E   + + V  +
Sbjct: 431 VPVHVMVTMADNAPPRFIQKELSAEIYENQQLGTYVKHV 469



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 19/183 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            V   ++LDR+  +  ++  Q++  + +    +    +TV + D+NDN P        +I 
Sbjct: 1749 VYVAKSLDRETID--RYELQIVGTDGKYVFET---KVTVQVLDVNDNPPYCLRYRYREIL 1803

Query: 62   -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       ++ + ATD D   NA++ + +   +N    KF +D  +GV++T G+L    
Sbjct: 1804 SEGSHPGAYVLTVLATDYDDEPNAKLRFYLTGDNND---KFSLDKETGVLKTVGQLDRET 1860

Query: 121  Q--YSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            Q  YS+T    D    T   SSQ  + VS +   N  +P F  +TY   + E   I + V
Sbjct: 1861 QAKYSLTAHVQDRDKPTWECSSQLEILVSDL---NDNAPKFTMSTYSSTLPEDVEIGTLV 1917

Query: 175  ATI 177
              +
Sbjct: 1918 TKV 1920



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 16/156 (10%)

Query: 26  REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVN 83
           REK   A    V + V + DINDN P    +P   + + +A++   I K+ A D D G N
Sbjct: 840 REKPRVAH---VIVNVTILDINDNCPMFVNLPYYAVVSVDAQKGDIITKVHAIDMDSGDN 896

Query: 84  AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQTI--- 139
            E+ Y +          F++  ++G I     L     +Y +T+ A D GG +  +I   
Sbjct: 897 GEVRYEL---KKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITPCSIEVP 952

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           V V V+   +   PVF +  Y  +V E   ++S +A
Sbjct: 953 VNVKVI---DRSMPVFDKQFYTDSVLESIEVHSPLA 985



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L     +QY +TV+ATD+  G  ++ 
Sbjct: 994  LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 1051

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +V + ++   N   P F Q++Y+++VSE A   + V  +
Sbjct: 1052 LVSILIL-DVNDCPPEFTQDSYNISVSEAAVFGTPVLRV 1089



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 101 FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F ++P +GVI    +L   +   +++TV AT+  G S+   V V V+   N  +P F Q 
Sbjct: 490 FFVNPSTGVIVIKNELDYEKTKFFNLTVSATNMAGASATCNVIVHVL-DRNDNAPRFLQA 548

Query: 159 TYDVNVSEGASINSTVATITVSRL 182
            Y   +SEGASI S V T T + L
Sbjct: 549 LYSGEISEGASIGSLVLTNTSAPL 572



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 17/196 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V+++ LDR+     + R+++      G   S  V + V + D NDNAP   +       
Sbjct: 1332 IVTRKKLDREE----QKRYEIPVMATDGGGRSGFVMVRVKIGDENDNAPVFLLREYKATI 1387

Query: 63   AGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR-IDPRSGVIETTGKLIAG 119
             G        +KI A D D    A+I YSIY    +       I+P +G +      +  
Sbjct: 1388 QGNLSLNTPFLKIRAQDADEDEAAKIVYSIYEPQTSPARSLLGINPDTGSLYLQKSAMPW 1447

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS---- 172
            E   + + ++A D G  +    V +S+ + G +   P+F++      V E +S+ +    
Sbjct: 1448 ENQLFELFIRAEDKGLTTHHADVPLSIYIMGFHDVPPLFERKEDKFFVREDSSVGTPITK 1507

Query: 173  --TVATITVS-RLASG 185
              TV   TV+ R+ SG
Sbjct: 1508 LKTVTNSTVTYRIVSG 1523



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 22/178 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
           ++V K  LD +     KF F +         AS   ++ V++ D NDNAPR L  +   +
Sbjct: 498 VIVIKNELDYEKT---KF-FNLTVSATNMAGASATCNVIVHVLDRNDNAPRFLQALYSGE 553

Query: 61  IQAGEARRQIVK--------IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           I  G +   +V         I+A D D  +NA + Y I  V +     F ID  +G I T
Sbjct: 554 ISEGASIGSLVLTNTSAPLVIKAEDADSELNALLNYDI--VEDLPRKYFHIDSSTGAIRT 611

Query: 113 TGKLIAGE---QYSITVQATDTGGK--SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
              L+  E    +S  V+ +D G    SS+T  +V + V   N   P F +  Y+V +
Sbjct: 612 V-MLLDHETIPMFSFHVKVSDLGKPKLSSETTAKVMIAVTDVNDCPPKFSKTDYNVTL 668



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 11/169 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++  K +LD +        F VIA ++   + S    + +++ D+NDN P+   P     
Sbjct: 1125 VIFLKRSLDHESHE--SHHFTVIAMDRGVPSLSSTAHVWMSVIDMNDNPPKFEQPSYTCF 1182

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +  E  + +  + A+D D  V+ ++TY+I  V       + ID  +G+I        G
Sbjct: 1183 LSEHAERGQFVTVVTASDPDY-VDEKLTYTI--VGGNEQQTYNIDQSTGIISLINMQNFG 1239

Query: 120  EQY--SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            EQ    + V  TD G  +S T V++ ++P  N  +P F     +V V E
Sbjct: 1240 EQKLSMLNVSVTD-GVYTSFTRVKIEILPA-NRHNPKFPNPIVEVTVLE 1286



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 20/171 (11%)

Query: 19  FRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGEARR 68
           F F V   +  K   ++     + + + D+ND  P+          ++P  +  A     
Sbjct: 623 FSFHVKVSDLGKPKLSSETTAKVMIAVTDVNDCPPKFSKTDYNVTLLLPTYKNVA----- 677

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
            + ++ A D D    A + Y I  +     H F ID +SG+I         + Y + V+ 
Sbjct: 678 -VTRVNAIDPDSSEGAALRYDI--IDGNKAHTFDIDAQSGIITVHNPDRMKKNYLLHVRV 734

Query: 129 TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +D G  SS   V V V    N+   +FQ+N Y+  + E ++  +TV  + V
Sbjct: 735 SD-GKYSSVAQVNVIVEKSENS-GLIFQKNVYEGAILENSTKITTVVVVNV 783


>gi|170032325|ref|XP_001844032.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167872318|gb|EDS35701.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 644

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 7/157 (4%)

Query: 34  SVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIY 91
           S   ++T+ + D NDN P          I    AR  Q+  I ATD DLG NA++TY++ 
Sbjct: 100 STETTITIQVTDTNDNPPTFAEPAYSFDIPENAARGFQVGVIAATDPDLGANADVTYTV- 158

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVVPGP 148
            +S+     F ++P++G+   T +L   E   Y + VQA D G  S S T+     V   
Sbjct: 159 -ISDWANDVFSLNPQTGIFTLTARLDYEEVQHYILVVQAQDNGHPSLSSTLTVYCNVIDL 217

Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           N  +P+F   +Y   + E   I++ V T++ +   SG
Sbjct: 218 NDNAPIFDPMSYSNEIFENVPISTDVVTVSATDTDSG 254



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 16/167 (9%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVN 83
           EKQ    S  V +T+ L D+ND AP    + P +    E       I+ I+A D D G N
Sbjct: 308 EKQ---LSSTVQVTIVLKDVNDLAPEF--VTPNETSVAENIPINTVIMAIKAVDRDEGRN 362

Query: 84  AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTI 139
             + Y +     T    F +    G++  +G+L       Y +TV A D G   KSSQ+ 
Sbjct: 363 GYVEYQLDPAVQT---PFTVGSADGLLRVSGRLDRETKSSYELTVTAKDRGEPPKSSQSK 419

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           + + V+   N  SP+F    Y   ++E ASI ++V  ++ + +  G 
Sbjct: 420 IRIHVL-DENDNSPIFDPKQYSAAIAENASIGASVLQVSATDIDEGA 465


>gi|148684875|gb|EDL16822.1| mCG19711 [Mus musculus]
          Length = 3278

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 403 YLVCVARRLDREERD--VYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 460

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N +ITYS+   ++T  H F IDP SG+I T 
Sbjct: 461 EPLPEVALPG----SFVVRVTARDPDQGTNGQITYSLAPGTHT--HWFSIDPTSGIITTA 514

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 515 ATLDYELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 574

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 575 GTCFLQVTATDADSG 589



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDN P     +   + ++       I+ +
Sbjct: 2324 HYHLQLLAHDGPHEGHA-----NLTVLVEDVNDNVPTFSQSLYQVMMLEHTPPGSAILSV 2378

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++     FR+DP +G + TT G +  G +      + ++A
Sbjct: 2379 SATDRDSGANGHIS---YHLASPA-EGFRVDPNNGTLFTTVGAMALGHEGPGVVDVVLEA 2434

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+++Q  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2435 RDHGAPGRTAQATVHVQLK-DQNDHAPSFTLPHYRVAVSEDLPPGSTLLTL 2484



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ D+ND AP  P      I  +       ++ ++ATD DLG N ++TY    VS  
Sbjct: 1615 LTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYG--GVSG- 1671

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F +DP +GV+ T   L   EQ  I  TV A D G     T + V V V   N  +P
Sbjct: 1672 --ESFSLDPNTGVLTTLRALDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTP 1729

Query: 154  VFQQNTYDVNVSEG 167
             F      + V EG
Sbjct: 1730 TFGNTHLSLEVPEG 1743



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2119 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2177

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2178 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RLVLMATDRGSP 2235

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2236 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2290



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +QI
Sbjct: 87  VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQI 133

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRID--PRSGVIETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++  P  G       +I
Sbjct: 134 PEHTALGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPGGAPVPELVI 190

Query: 118 AGE-------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           AGE        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 191 AGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 249

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 250 APGSPVLQVFASDADAGA 267



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 24/187 (12%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIV 71
             PG     + AR+      +   ++ V L D ND+AP    +P  ++   E       ++
Sbjct: 2424 GPGVVDVVLEARDHGAPGRTAQATVHVQLKDQNDHAPSF-TLPHYRVAVSEDLPPGSTLL 2482

Query: 72   KIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGE-- 120
             +EATD D    +A + YSI  +S      F+++PR   +        +  G L+  E  
Sbjct: 2483 TLEATDADGSRTHATVDYSI--ISGNRGRVFQLEPRLAEVGDGVGPGPQALGCLVLLEPL 2540

Query: 121  ------QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  QY++TV A D G     + V V+V V   N   PVF + +Y V V E   + + 
Sbjct: 2541 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAE 2600

Query: 174  VATITVS 180
            +  +  S
Sbjct: 2601 LLHVEAS 2607



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LV++ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 188 LVIAGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 244

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G +     L
Sbjct: 245 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGFLRLERPL 301

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 302 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 361

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 362 PGQLVARISVS 372



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E       +++++A
Sbjct: 1801 FQLQIEARDGGQPALSATLLVTVTVLDANDHAPVFP-VPSYSVEVPEDAPVGTLLLQLQA 1859

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D G N  +   +Y++       F ++P SG + T   L     A   +S+T      
Sbjct: 1860 HDPDDGDNGRV---MYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAA 1916

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE-GASINSTVATITVSR 181
             G  S T+     V   N  +P F  +   + +   G S+N     +   R
Sbjct: 1917 AGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLR 1967



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 47   NDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND++PRL   P     A        + ++ ATD D G N  +TYS+  +S      FRI 
Sbjct: 1080 NDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIH 1138

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
            P++G + T   L   +Q  + + VQ  D G   +S+   V V+V+   N  SP F Q
Sbjct: 1139 PQTGEVTTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVL-DLNDNSPTFLQ 1194



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 8/159 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDND 79
              V AR++        +++ V + D ND+ P        +++  G+  + +  + A+D D
Sbjct: 1699 LTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQTLTTLRASDPD 1758

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKS 135
             G+N ++ Y I    ++G   F +D  SG   T   L       + + ++A D G    S
Sbjct: 1759 GGLNGQLQYRILDGDSSG--AFALDLTSGEFGTMRPLDREVEPAFQLQIEARDGGQPALS 1816

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +V V+V+   N  +PVF   +Y V V E A + + +
Sbjct: 1817 ATLLVTVTVLDA-NDHAPVFPVPSYSVEVPEDAPVGTLL 1854



 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 19/169 (11%)

Query: 21   FQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKI 73
             ++  R   GT     V+ + V L+D+NDN+P  P      ++P    Q       I  +
Sbjct: 842  LELEVRAGSGTPPVFAVARIRVLLDDVNDNSPAFPAPEDTVLLP----QNTAPGTPIYTL 897

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDT 131
             A D D G N+ IT+++      GL  F +DP +G +          G  + + V+A D 
Sbjct: 898  RALDPDSGANSRITFNLL-AGGDGL--FTVDPTTGHVRLMGPLGPPGGPAHELEVEARDG 954

Query: 132  GGKSSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G     +   + VV    G +  +P F   TY V++  G +  + +  +
Sbjct: 955  GSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQV 1003



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 18/170 (10%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVK 72
            ++   V A ++     S  V +TV + D+NDN P        +  P  +  G    +++ 
Sbjct: 2547 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA---ELLH 2603

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATD 130
            +EA+D D G +  + +++      GL  F +D  SG +  +  L      Q+ + VQA D
Sbjct: 2604 VEASDADPGPHGLVHFTLSSGDPLGL--FELDENSGALRLSRPLDCETQAQHQLVVQAAD 2661

Query: 131  TGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              G     +   VEV  V   N   P F  +    +++E     + V T+
Sbjct: 2662 PAGTHFSLVPVTVEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2708



 Score = 35.8 bits (81), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 21/179 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPPIQIQA-- 63
            LDR+  +   + F V A +  G AA   S  V +T+ + D+ND+AP  P  P ++++   
Sbjct: 1897 LDRE--HCASYAFSVTAVD--GAAAGPLSTTVPITITVRDVNDHAPAFPTSP-LRLRLPR 1951

Query: 64   -----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                  +    +  + A D D G NA I   +Y ++ T      +D  +G I      +A
Sbjct: 1952 PGPSLNKPTLALATLRAEDRDAGANASI---LYRLAGTPPPGTTVDSYTGEIRVARSPVA 2008

Query: 119  -GEQYSIT-VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             G Q  +  + ATD G  + S T V V  + G   R P F + + +  + E A   + V
Sbjct: 2009 LGPQDRVLFIVATDLGRPARSATGVVVVGIQGEPERGPRFPRTSSEAVLRENAPPGTPV 2067


>gi|301753507|ref|XP_002912640.1| PREDICTED: protocadherin gamma-B3-like [Ailuropoda melanoleuca]
          Length = 820

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ + ATD D GVNAEITY+  +  N     F++D ++GV+ T G+L   E+  Y+I V+
Sbjct: 261 VLSVMATDLDEGVNAEITYAFINTGNVVKQLFKLDSKTGVLTTGGELDFEERESYTIGVE 320

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G  ++   +++ ++   N  +P    ++    + E A + + VA I    L SG
Sbjct: 321 AKDGGRHTAHCKIQIDIL-DENDNAPEVTLDSESKQIQEDAELGTVVALIKTHDLDSG 377



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 11/107 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F   + AR++   A S  VSL V ++D NDNAPR+  P + P          +A +    
Sbjct: 528 FELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + K+ A D D G NA ++Y +   S  GL  F +  R+G + T   L
Sbjct: 588 VTKVVAVDADSGHNAWLSYHVLQASEPGL--FSLGLRTGEVRTARAL 632



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 15/162 (9%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQA-GEARRQIVKIEATDNDLGVNAE 85
           K G   +    + +++ D NDNAP + +     QIQ   E    +  I+  D D G N E
Sbjct: 322 KDGGRHTAHCKIQIDILDENDNAPEVTLDSESKQIQEDAELGTVVALIKTHDLDSGFNGE 381

Query: 86  ITYSIYHVSNTGLHKFRI--DPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQT 138
           +   +      G   F+I  D ++  +  T  ++  EQ   Y+IT+  TD G    SS  
Sbjct: 382 VFCQL-----QGKFPFKIVQDTKNTYMLVTDGVLDREQIPEYNITITVTDRGKPPLSSNR 436

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V ++++   N  +PVF Q  Y V+V+E     +++A ++ S
Sbjct: 437 SVLLNII-DVNDNAPVFGQAFYLVHVAENNPPGASIAQVSAS 477


>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
            musculus]
          Length = 3301

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y       V       F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 713 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 771

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 772 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 827

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 828 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 310 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSI 369

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 370 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 428

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 429 YRETLRENVEEGYPILQLRAT 449



 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 633 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 664



 Score = 43.9 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176


>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
            musculus]
          Length = 3302

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y       V       F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 713 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 771

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 772 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 827

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 828 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 310 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSI 369

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 370 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 428

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 429 YRETLRENVEEGYPILQLRAT 449



 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 633 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 664



 Score = 43.9 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176


>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
            musculus]
 gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
            Precursor
          Length = 3301

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y       V       F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 713 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 771

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 772 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 827

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 828 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 310 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSI 369

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 370 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 428

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 429 YRETLRENVEEGYPILQLRAT 449



 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 633 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 664



 Score = 43.9 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176


>gi|242397490|ref|NP_001156415.1| dachsous 1 precursor [Mus musculus]
          Length = 3291

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 416 YLVCVARRLDREERD--VYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 473

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N +ITYS+   ++T  H F IDP SG+I T 
Sbjct: 474 EPLPEVALPG----SFVVRVTARDPDQGTNGQITYSLAPGTHT--HWFSIDPTSGIITTA 527

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 528 ATLDYELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 587

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 588 GTCFLQVTATDADSG 602



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDN P     +   + ++       I+ +
Sbjct: 2337 HYHLQLLAHDGPHEGHA-----NLTVLVEDVNDNVPTFSQSLYQVMMLEHTPPGSAILSV 2391

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++     FR+DP +G + TT G +  G +      + ++A
Sbjct: 2392 SATDRDSGANGHIS---YHLASPA-EGFRVDPNNGTLFTTVGAMALGHEGPGVVDVVLEA 2447

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+++Q  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2448 RDHGAPGRTAQATVHVQLK-DQNDHAPSFTLPHYRVAVSEDLPPGSTLLTL 2497



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ D+ND AP  P      I  +       ++ ++ATD DLG N ++TY    VS  
Sbjct: 1628 LTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYG--GVSG- 1684

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F +DP +GV+ T   L   EQ  I  TV A D G     T + V V V   N  +P
Sbjct: 1685 --ESFSLDPNTGVLTTLRALDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTP 1742

Query: 154  VFQQNTYDVNVSEG 167
             F      + V EG
Sbjct: 1743 TFGNTHLSLEVPEG 1756



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 2132 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2190

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 2191 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RLVLMATDRGSP 2248

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2249 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2303



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +QI
Sbjct: 100 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQI 146

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRID--PRSGVIETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++  P  G       +I
Sbjct: 147 PEHTALGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPGGAPVPELVI 203

Query: 118 AGE-------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           AGE        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 204 AGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 262

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 263 APGSPVLQVFASDADAGA 280



 Score = 43.1 bits (100), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 24/187 (12%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIV 71
             PG     + AR+      +   ++ V L D ND+AP    +P  ++   E       ++
Sbjct: 2437 GPGVVDVVLEARDHGAPGRTAQATVHVQLKDQNDHAPSF-TLPHYRVAVSEDLPPGSTLL 2495

Query: 72   KIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGE-- 120
             +EATD D    +A + YSI  +S      F+++PR   +        +  G L+  E  
Sbjct: 2496 TLEATDADGSRTHATVDYSI--ISGNRGRVFQLEPRLAEVGDGVGPGPQALGCLVLLEPL 2553

Query: 121  ------QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  QY++TV A D G     + V V+V V   N   PVF + +Y V V E   + + 
Sbjct: 2554 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAE 2613

Query: 174  VATITVS 180
            +  +  S
Sbjct: 2614 LLHVEAS 2620



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E       +++++A
Sbjct: 1814 FQLQIEARDGGQPALSATLLVTVTVLDANDHAPVFP-VPSYSVEVPEDAPVGTLLLQLQA 1872

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D G N  +   +Y++       F ++P SG + T   L     A   +S+T      
Sbjct: 1873 HDPDDGDNGRV---MYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAA 1929

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE-GASINSTVATITVSR 181
             G  S T+     V   N  +P F  +   + +   G S+N     +   R
Sbjct: 1930 AGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLR 1980



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LV++ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 201 LVIAGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G +     L
Sbjct: 258 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGFLRLERPL 314

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 315 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 374

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 375 PGQLVARISVS 385



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 47   NDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND++PRL   P     A        + ++ ATD D G N  +TYS+  +S      FRI 
Sbjct: 1093 NDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIH 1151

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
            P++G + T   L   +Q  + + VQ  D G   +S+   V V+V+   N  SP F Q
Sbjct: 1152 PQTGEVTTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVL-DLNDNSPTFLQ 1207



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 8/159 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDND 79
              V AR++        +++ V + D ND+ P        +++  G+  + +  + A+D D
Sbjct: 1712 LTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQTLTTLRASDPD 1771

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKS 135
             G+N ++ Y I    ++G   F +D  SG   T   L       + + ++A D G    S
Sbjct: 1772 GGLNGQLQYRILDGDSSG--AFALDLTSGEFGTMRPLDREVEPAFQLQIEARDGGQPALS 1829

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +V V+V+   N  +PVF   +Y V V E A + + +
Sbjct: 1830 ATLLVTVTVLDA-NDHAPVFPVPSYSVEVPEDAPVGTLL 1867



 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 19/169 (11%)

Query: 21   FQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKI 73
             ++  R   GT     V+ + V L+D+NDN+P  P      ++P    Q       I  +
Sbjct: 855  LELEVRAGSGTPPVFAVARIRVLLDDVNDNSPAFPAPEDTVLLP----QNTAPGTPIYTL 910

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDT 131
             A D D G N+ IT+++      GL  F +DP +G +          G  + + V+A D 
Sbjct: 911  RALDPDSGANSRITFNLL-AGGDGL--FTVDPTTGHVRLMGPLGPPGGPAHELEVEARDG 967

Query: 132  GGKSSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G     +   + VV    G +  +P F   TY V++  G +  + +  +
Sbjct: 968  GSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQV 1016



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 18/170 (10%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVK 72
            ++   V A ++     S  V +TV + D+NDN P        +  P  +  G    +++ 
Sbjct: 2560 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA---ELLH 2616

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATD 130
            +EA+D D G +  + +++      GL  F +D  SG +  +  L      Q+ + VQA D
Sbjct: 2617 VEASDADPGPHGLVHFTLSSGDPLGL--FELDENSGALRLSRPLDCETQAQHQLVVQAAD 2674

Query: 131  TGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              G     +   VEV  V   N   P F  +    +++E     + V T+
Sbjct: 2675 PAGTHFSLVPVTVEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2721



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 21/179 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIPPIQIQA-- 63
            LDR+  +   + F V A +  G AA   S  V +T+ + D+ND+AP  P  P ++++   
Sbjct: 1910 LDRE--HCASYAFSVTAVD--GAAAGPLSTTVPITITVRDVNDHAPAFPTSP-LRLRLPR 1964

Query: 64   -----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                  +    +  + A D D G NA I   +Y ++ T      +D  +G I      +A
Sbjct: 1965 PGPSLNKPTLALATLRAEDRDAGANASI---LYRLAGTPPPGTTVDSYTGEIRVARSPVA 2021

Query: 119  -GEQYSIT-VQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             G Q  +  + ATD G  + S T V V  + G   R P F + + +  + E A   + V
Sbjct: 2022 LGPQDRVLFIVATDLGRPARSATGVVVVGIQGEPERGPRFPRTSSEAVLRENAPPGTPV 2080


>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3 [Canis lupus familiaris]
          Length = 3438

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 1049 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 1108

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1109 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1167

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1168 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1212



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ ++  LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 506 LIRTEAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFE-----QA 558

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 559 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAASAAFEIDPRSGLIS 618

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 619 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 678

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 679 DVRPHTVVLRVTAT 692



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            +N+ D N + P         +   E R     +V I A+D+D+G NA ITY +       
Sbjct: 968  INITDANTHRPVFQS-AHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLL----EDN 1022

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
            L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 1023 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 1081

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
             F  + Y   VSE A   ++V  I+ +
Sbjct: 1082 QFVASHYTGLVSEDAPPFTSVLQISAT 1108



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 836  LDRESVE--HYFFGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 892

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
                +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 893  VGTTVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 948

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               V             V +++    NT  PVFQ   Y V+V+E   + STV  I+ S
Sbjct: 949  FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTVVVISAS 1005



 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    QA       A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 441 ANRHPQFPQYNYQALVPENEAAGTTVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSI 500

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 501 DPLSGLIRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVT-DRNDHAPVFEQAQ 559

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 560 YRETLRENVEEGYPILQLRAT 580



 Score = 44.3 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 648 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 705

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 706 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 763

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 764 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 795



 Score = 44.3 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1172 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1228

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1229 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1286

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1287 NSPVLNNFQILFNNYVSNRSD 1307


>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
            norvegicus]
 gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; AltName:
            Full=Multiple epidermal growth factor-like domains
            protein 2; Short=Multiple EGF-like domains protein 2;
            Flags: Precursor
 gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
          Length = 3313

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 918  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 978  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLIS 487

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 548 DVRPHTVVLRVTAT 561



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAE 85
           T A     L+ N       A R P  P    Q        A   ++++ A D D G    
Sbjct: 291 TGAEAKRILSTNQARSRRAANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGR 350

Query: 86  ITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIV 140
           + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V A D G    S+ T+V
Sbjct: 351 LVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMV 410

Query: 141 EVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            V+V    N  +PVF+Q  Y      NV EG  I    AT
Sbjct: 411 AVTVA-DRNDHAPVFEQAQYRETLRENVEEGYPILQLRAT 449



 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 705 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 761

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + G+   T  L      E+Y
Sbjct: 762 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGMGLVTLALPLDYKQERY 817

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 818 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874



 Score = 45.1 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  SP+F    + V+V E A +  +V  I
Sbjct: 633 VDINDHSPIFVSTPFQVSVLENAPLGHSVIHI 664



 Score = 43.9 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176


>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
          Length = 4589

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRESPMEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D GVN+ ITYS+Y  ++  +     IDP +G + T      +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGVNSRITYSLYSEASVSVADLLEIDPDNGWMVTKSNFHQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P    P F Q  Y  ++ E   I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PEILLPSFTQPQYSFSIPEDTVIGSTVD 2728

Query: 176  TITV 179
            ++ +
Sbjct: 2729 SLRI 2732



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN+P    +    +   +  + + I+KI A D D+G N +I YS+Y    +G 
Sbjct: 3017 VTVIDVNDNSPVCDQVAYTALFPEDIPSNKIILKISAKDADIGPNGDIRYSLY---GSGN 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            +KF +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   P+F
Sbjct: 3074 NKFFLDPESGELKTLA-LLDREKIPVYNLVARATDGGGRFCQSDIRL-ILEDVNDNPPIF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNACVYENTATKALLTRV 3153



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            E LD +  +  K    ++ R+++         + VN+ D ND++P    P+      ++ 
Sbjct: 1522 ERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFESA 1579

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQY 122
                 ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  +    Q+
Sbjct: 1580 ALGSAVLQVTALDKDRGENAELLYSI-EAGNTG-NTFKIEPILGIITVSKEPDMTTMGQF 1637

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++++ TD G    S+  IV +SV    N+  P F Q  Y   V+E   I ++V  I+
Sbjct: 1638 VLSIKVTDQGTPPMSATAIVRISVTMSDNSH-PKFTQKEYQAEVNENVDIGTSVILIS 1694



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 VWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPVPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 15/155 (9%)

Query: 32   AASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            A S   ++T+ + DINDN P       L  +P    +      +++ + AT  D+G NAE
Sbjct: 3215 ALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTEVLAVFATSKDIGTNAE 3270

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
            ITY I   +  G  KF I+P++G I     L     + + + V+A D G  +   +  V+
Sbjct: 3271 ITYLIRSGNERG--KFMINPKTGGISVIDSLDYEMCKDFYLVVEAKDGGTPALSAVATVN 3328

Query: 144  V-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + +   N  +P F Q  Y   +SE ASI  +V  +
Sbjct: 3329 INLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVL 3363



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAP-RLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LT+N+ D NDN P  L     + I ++     +I+++EA D DLG N E+TYS+     T
Sbjct: 817 LTINVEDANDNRPIFLQESYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL----T 872

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGKSSQTIVEVSV-VPGPNTR 151
              +F I+  +G++    +L   +   YS+ ++A D    G+   ++V + V +   N  
Sbjct: 873 DAQQFSINSSTGIVYVADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVFLDDVNDC 932

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           SP F   +Y V V E   + + +A +
Sbjct: 933 SPTFIPTSYSVKVLEDLPVGTVIAWL 958



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VIYTADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFVINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ V V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 17   GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
              F F V  R+    Q TA S P  + + + D+NDN P     +   + +       +I+
Sbjct: 1845 AHFHFHVHVRDSGNPQLTAES-PAEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEIL 1903

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            K++ATD D  V AE+TYS+   S   +  F ID  SGV+      ++ + Y + V+ +D 
Sbjct: 1904 KVQATDPDSEVPAELTYSLMEGS---VDYFLIDSSSGVLSIKNSSLSKDHYMLIVRVSD- 1959

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1960 -GKFYGTAMVTIMVKEAMDSGLHFTQSFYFASISENSTNITKVAIV 2004



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 43   LNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            + DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TYS+         
Sbjct: 2074 IEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVSALDRDKGANGEVTYSL----QEDYG 2128

Query: 100  KFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
             F I+P SG +   E     ++  +Y + + A D G  +    +E+ +    N   PVF 
Sbjct: 2129 HFEINPESGSVFLKEAFNSDLSNIEYGVIILAKDGGKPALSASIELPITI-VNKAMPVFD 2187

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +  Y  +V+E   +++ + +I
Sbjct: 2188 KPFYTTSVNEDIEMHTPILSI 2208



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 11/169 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F   V A++    A S   ++ +NL D+NDNAP+    +   +  +       ++ + A 
Sbjct: 3307 FYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVLIAE 3366

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG 132
            D D   N +I +SI  VS    ++F +D   G+I+   KL    ++G  YS+ +QATD+G
Sbjct: 3367 DVDSPPNGQIRFSI--VSGDRDNEFAVDSVLGLIKVKKKLDRERVSG--YSLLIQATDSG 3422

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +  + V V++ +   N   PVF    Y   + E   + +++  + V+
Sbjct: 3423 IPAMSSTVTVNIDISDVNDNGPVFTPANYTAVIQENKPVGTSILQLMVT 3471



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++AR   G        + + L D+NDN P            +    +  + +++ATD 
Sbjct: 3099 YNLVARATDGGGRFCQSDIRLILEDVNDNPPIFSSDHYNACVYENTATKALLTRVQATDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            DLG+N ++ YS+   +++    F +D  SG+I     L    Q  Y+I+V+A+D      
Sbjct: 3159 DLGINRKVVYSL---ADSAGGYFSVDSSSGIIILEQPLDRELQSSYNISVKASDQSILKA 3215

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS   V ++V+   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLATVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTEVLAV 3258



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 21   FQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            F++  R     T A   V++ + +ND+NDN P    P       +A      ++++ A+D
Sbjct: 2254 FKLTVRASDALTGARAEVTVDLLINDVNDNPPIFNQPAYNATLSEASLIGTPVLQVVASD 2313

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG- 133
             D   N  + Y I   +      F ID  SG+I  T +++  E   Q ++ V+ATD G  
Sbjct: 2314 ADSENNKVVQYQIVQDTYNSTDYFHIDSTSGLI-LTARMLDHESVQQSTLKVRATDNGFP 2372

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS+ +V + V    N   P+F Q  Y+  VSE A     V  +  S
Sbjct: 2373 PMSSEVLVNIYVT-DMNDNPPIFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 7/135 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
            +V   + LDR+       + +   R + G      V+L V L+D+ND +P  +P    ++
Sbjct: 885  IVYVADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVFLDDVNDCSPTFIPTSYSVK 944

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            + +       I  +E  D DLG+  ++ Y++ +  N    +F ID  SG I  + +L   
Sbjct: 945  VLEDLPVGTVIAWLETHDPDLGLGGQVRYTLVNDYNG---RFEIDKASGAIRLSKELDYE 1001

Query: 120  EQ--YSITVQATDTG 132
            +Q  Y++TV+A D G
Sbjct: 1002 KQQFYNLTVRAKDKG 1016



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 10/151 (6%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P         I ++      ++++++A D D G N ++TY+++  S
Sbjct: 2798 VDIEIKVLDLNDNKPFFDASSYEAIIMEGMPIGTRLIQVKAIDRDWGANGQVTYALHSDS 2857

Query: 95   NTG--LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPG 147
            +    +  F ID  +G I T   L       ++ +V A+D G     SS  +V V+V   
Sbjct: 2858 SPEKIMEVFSIDSNTGWISTLKDLDHERDPTFAFSVVASDLGEAFSLSSTILVSVTVT-D 2916

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             N  +PVF    Y   V E       VA ++
Sbjct: 2917 INDNAPVFGHEMYREQVKESDPPGEVVAVLS 2947



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I+++EATD D     +++Y+I+  + +  + KFRID  +GV+    +L   A +++ + 
Sbjct: 1478 EILQVEATDRD--EKHKLSYTIHSSIDSVSMRKFRIDASTGVLYIAERLDHEAQDKHILN 1535

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +   D      + +  V V V   N  SP F    Y+ +V E A++ S V  +T
Sbjct: 1536 IMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFESAALGSAVLQVT 1589



 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T++L D ND+ P    P       ++      ++ + A+D D G N  ITYSI  +S  
Sbjct: 458 VTISLEDANDHTPEFQQPSYEAFVNESVPVGTSVLSVSASDKDKGENGYITYSIASLSAL 517

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
               F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 518 ---PFSINQFTGVIRTTEELDFESSPENYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 574

Query: 152 SPVFQQ 157
            P+F++
Sbjct: 575 RPLFEK 580



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVIYTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  I ++ ATD D+G N E     Y+     +  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADIGSNGE----FYYYFKNKVDLFS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + V A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEVLAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI T  K +  E+   Y + VQAT+  G +S   V + +V   N   P+F  
Sbjct: 1714 FTINPYSGVI-TNQKALDYERISSYQLIVQATNMAGMASNATVNIQIV-DENDNPPIFLF 1771

Query: 158  NTYDVNVSEGASINSTV 174
            + Y  ++SE A INS V
Sbjct: 1772 SHYSGSLSEVAPINSIV 1788



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITV 126
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +   EQ   Y + +
Sbjct: 745 ILKIKAFDADSGFNGKVVFTISD-GNTD-SCFNIDMETGQLKVLMPM-DREQTDLYLLNI 801

Query: 127 QATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              D G   KSS  ++ ++V    + R P+F Q +Y VN+ E +SI + +  +
Sbjct: 802 TIYDLGRPQKSSWRLLTINVEDANDNR-PIFLQESYSVNILESSSIGTEIIQV 853



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 34   SVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIY 91
            S  V + + + D+NDN P    +I    +     R   V  ++A+D D      + YSI 
Sbjct: 2375 SSEVLVNIYVTDMNDNPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSI- 2433

Query: 92   HVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
             +S      F +D +SG+I  +   K      YS+ V  +D G  +S   V + ++ G N
Sbjct: 2434 -LSGNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRIL-GAN 2490

Query: 150  TRSPVFQQNTYDVNVSEGAS 169
              SP F Q+TY   V E A+
Sbjct: 2491 LYSPAFSQSTYVAEVRENAA 2510



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+  S
Sbjct: 2514 KVIHVRATDGDPGAYGQISYTI--INDFAKDRFLIDSNGQVI-TTERLDRESPMEGD-IS 2569

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2570 IFLRALDGGGRTTFCTVRVIVV-DENDNAPQFLTVEYRASV 2609



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 12/175 (6%)

Query: 10   DRDPPNPGKFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            +RDP     F F V+A +  +  + S  + ++V + DINDNAP     +   Q++  +  
Sbjct: 2884 ERDP----TFAFSVVASDLGEAFSLSSTILVSVTVTDINDNAPVFGHEMYREQVKESDPP 2939

Query: 68   RQIVKIEAT-DNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
             ++V + +T D D   +N +++Y I   +  G     +      +     L   EQ  Y 
Sbjct: 2940 GEVVAVLSTWDEDTSDINQQVSYHITGGNPRGRFALGLVQNEWKVYVKRPLDREEQDVYF 2999

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + + ATD G   +Q +VEV+V+   N  SPV  Q  Y     E    N  +  I+
Sbjct: 3000 LNITATD-GLFVTQAMVEVTVI-DVNDNSPVCDQVAYTALFPEDIPSNKIILKIS 3052



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           L V++  IN++AP + ++  I      E    +V ++  D D G N EI  SI  V+   
Sbjct: 252 LYVHIERINEHAPTISVVTHIPFSLDKEPTYAVVNVD--DLDEGANGEIE-SISIVAGDP 308

Query: 98  LHKFRIDPRSGVIETTG----KLIAGEQ----YSITVQATDTGGKSSQTIVEVSVVPGPN 149
           L +F +      I        K I  E     Y++T+QA D G     + V+V  +  P 
Sbjct: 309 LEQFLLVKEGKWINEYKIKERKSIDWESFPYGYNLTLQAKDKGSPQKFSAVKVVHIANPQ 368

Query: 150 TRS-PV-FQQNTYDVNVSEGASINSTVATITVS 180
             + PV F++ TY+V +SE +     VA + +S
Sbjct: 369 KDNIPVRFEKETYNVTISEFSPPGVVVAIVKLS 401



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L     E Y + V +   G  S+Q  + +      N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLDVSRKEVYELGV-SNKEGDLSAQVTISLE---DANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
           +Y+  V+E   + ++V +++ S    G
Sbjct: 476 SYEAFVNESVPVGTSVLSVSASDKDKG 502


>gi|170065060|ref|XP_001867785.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167882207|gb|EDS45590.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1033

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 24/189 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREK-------QGTAASVPVSLTVNLNDINDNAPRLP----MIP 57
           LDRD     K+   V A +          T  +    + V + D+NDN P         P
Sbjct: 416 LDRD-----KYELNVTAMDDGSCCINGDATIHTSTAVVVVFITDVNDNKPVFKDCGTYYP 470

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            ++ +       ++K++ATD D GVN ++ YSI    N    KF +D  +G + +T K+ 
Sbjct: 471 KVE-EGAPNGSPVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEV-STNKVF 528

Query: 118 -----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                 G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI 
Sbjct: 529 DREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIG 588

Query: 172 STVATITVS 180
           + +  ++ S
Sbjct: 589 TNILRVSAS 597



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 202 LAKELDFEDLRQPHVYSLVVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 259

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 260 VDEDIPLGTSILKVKAMDSDSGANAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 312

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  +      V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 313 NNNAYYEFVVTAKDKGEPAKTGTATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 372

Query: 176 TITVS 180
           T+  S
Sbjct: 373 TVVAS 377


>gi|341877402|gb|EGT33337.1| hypothetical protein CAEBREN_30872 [Caenorhabditis brenneri]
          Length = 2606

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 84/175 (48%), Gaps = 25/175 (14%)

Query: 24  IAREKQGT--AASVPVSLTVNLNDINDNAPRL----PMIPPIQ-IQAGEARRQIVKIEAT 76
           + R K G   A S  V LT+N+ DIND+AP L     MI   + +  GE   ++ ++ A 
Sbjct: 443 VIRAKDGAQPALSSTVPLTINVVDINDHAPTLIAAQKMITLEENVAIGE---EVGRVYAI 499

Query: 77  DNDLGVNAEITY----------SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
           D D G N  I Y           I+  S  G   F ID  SGVI+TT KL+  E   +YS
Sbjct: 500 DEDSGPNGIIRYVGECDFWNKLCIFRYSMEGSEDFIIDEDSGVIKTT-KLLDRETVARYS 558

Query: 124 ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + V A D G     T   ++VV    N  +P+F +  Y+V +SE     S + T+
Sbjct: 559 LKVTARDMGTPPLNTSTTITVVLKDINDNAPIFDKKEYNVTISEEMPRGSQIITL 613



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVK 72
           F FQV A E+     S   ++ V++ D+ DN+P    I       GE R        ++ 
Sbjct: 231 FFFQVTAYERVDPTISASTTVVVHVLDVQDNSP----IFEKDSYFGEIREDAPIGTTVLS 286

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT---VQAT 129
           + A D D G N EI YS+   +   L    I+ +SGVI+T   L   E  S+    V A+
Sbjct: 287 VFARDLDSGENGEIEYSLGEGNGKSL--LAINSKSGVIQTAAPL-DRETLSLIRLDVIAS 343

Query: 130 DTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           D G   + S  +VE++V+   N  +PVF  ++Y+V + E  ++ + +AT+
Sbjct: 344 DKGVPKRESSALVEITVL-DVNDNAPVFASDSYNVTILENITLPAVIATV 392



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 9/172 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++  +V AR+      +   ++TV L DINDNAP           + E  R
Sbjct: 549 LDRE--TVARYSLKVTARDMGTPPLNTSTTITVVLKDINDNAPIFDKKEYNVTISEEMPR 606

Query: 69  --QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSIT 125
             QI+ ++A DND   + +ITY I            I  +  ++  +G+L     +  + 
Sbjct: 607 GSQIITLKAVDND--EDQKITYRIEEADRDVFSILDIGDQGAILSVSGELNRQDHKIKVE 664

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + ATD GG   + +V V  +   N+ +P F  + + V + E + I   V T+
Sbjct: 665 ISATDQGGLQGRCVVNV-FIDDVNS-APYFTDHLFSVKIPEHSPIGFPVITL 714



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 12/120 (10%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ ++A D+D G NA + YSI          F+ID  SG I     L   ++  +S+ V 
Sbjct: 711 VITLKAEDHDRGDNARLIYSI-----DSTQFFKIDSASGDISVAADLDREDRATFSVIVT 765

Query: 128 ATDTGGKSSQTIVEVSVVPGPNT-----RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           A+D       T  ++ V+   NT      +P F  ++Y   +SE   + ++   + +  L
Sbjct: 766 ASDHASPPLNTSTQIEVILDDNTDLFNDNAPQFTSSSYAATISEDIPVGTSFLQVFIGFL 825


>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
          Length = 3259

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 9/152 (5%)

Query: 41   VNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            V++ D N+NAPR      + P+    G  +R    I   D D GVNAEI YS+  V+ + 
Sbjct: 1241 VSVVDANNNAPRFEQRSYLSPVPENYGVNKRITQLIARDDADFGVNAEIDYSLVSVNGSD 1300

Query: 98   LHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVS-VVPGPNTRSP 153
            L  F I+ R+G +   ++   +  G  + +T  ATD G    +  V ++ V+ G N  +P
Sbjct: 1301 L--FSIEERNGWLYVRKSLHGIAVGTVFLLTAVATDRGVPPQKDEVTLTLVISGENRHAP 1358

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             F   +Y V V E   +N+T+ T++     SG
Sbjct: 1359 TFAAVSYQVRVPENEPVNTTILTVSAVDGDSG 1390



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 21/189 (11%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQI 61
           E LDR+     K ++ +  R   G      + LT+ + D NDNAP           P  +
Sbjct: 55  EALDRET----KEKYLLRVRADDGLQHR-DIVLTIQVTDTNDNAPTFQSTAYSFDVPEDV 109

Query: 62  QAGEARRQIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             G    QIV   ATD D  G N++++Y +  +S+     F ++P +GV   T  L   +
Sbjct: 110 LRGSRVGQIV---ATDADAEGPNSQLSYVL--ISDWANDVFSLNPNTGVFTLTASLDYEQ 164

Query: 121 --QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              Y + VQATD G    SS   V  +VV   N  +P+F+       + E A+I + V T
Sbjct: 165 MQHYILVVQATDGGMPPLSSTVTVYCNVV-DLNDNAPIFEAGPLAAEIMENATIGTPVLT 223

Query: 177 ITVSRLASG 185
           +T   L SG
Sbjct: 224 VTAQDLDSG 232



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 21/184 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNA-----PRLPMIPPIQIQAGEARRQIVKI 73
           +   ++A++   T  +  V LT+ + D+NDNA     PR     P     G     +   
Sbjct: 696 YHLTLLAQDSSPTERATAVKLTIYVQDVNDNAPHFSSPRYTAYLPTGTHLGSF---VFGA 752

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-QYSITVQATDTG 132
           +A D+D G N+ I   +Y +      +F ID  +GVI    ++I  +  Y + +QA+D G
Sbjct: 753 KAVDDDDGENSRI---VYRLLGQDAKRFTIDFDNGVIRAAEEMIDEQITYHLQIQASDCG 809

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQN-----TYDVNVSEGASIN----STVATITVSRLA 183
            K      ++ +        P F  N     T   +V EG  I     ST  + +VS L 
Sbjct: 810 DKPQHVTADLVIHLWQRHLFPNFHTNFTTKFTLSEDVPEGTLITKLSASTPKSGSVSNLV 869

Query: 184 SGCA 187
            G A
Sbjct: 870 YGIA 873



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 76/181 (41%), Gaps = 27/181 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----------IPPIQIQAGEAR 67
            +   +  R+    A    + L VN+ D NDNAP +              PP+ +      
Sbjct: 904  YEIWIEVRDSDLPALRSVLELQVNVTDANDNAPVMEAAIYNATVLENEYPPLPV------ 957

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGE--QYSI 124
               VKI A D D G N ++TY  Y V+N   H+ F ID  +G I+T  +L   E   Y +
Sbjct: 958  ---VKISAKDRDSGDNGQVTY--YLVNN--FHETFVIDISTGQIDTNARLDREEIASYEL 1010

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
             V+A D G         V V       +P      + VNV+E + I + V  IT S L  
Sbjct: 1011 IVEARDHGHPHLTGTTTVLVTVLDKNDNPPHFTRLFSVNVTENSEIGTFVIRITSSDLDI 1070

Query: 185  G 185
            G
Sbjct: 1071 G 1071



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 14/149 (9%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
           V +TV L D+ND +P    I P +I   E   +   ++ I+A D D G N  + YS+   
Sbjct: 293 VQVTVVLLDVNDMSPEF--ISPTKISIIENAPSNTVVMSIKAVDRDEGRNGYVEYSL--- 347

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPN 149
            N  L  F +    G++  +G L   +   Y++ V A D G   +SS   V V+V+   N
Sbjct: 348 ENDSL-PFTLGSVDGLLRVSGPLDREQTSNYTLQVIAKDRGDPPRSSSIPVTVTVL-DEN 405

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATIT 178
             SPVF    Y   V+E ASI ++V  ++
Sbjct: 406 DNSPVFDPKQYSATVAENASIGASVLQVS 434



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 45  DINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND++P           ++   A   + K+ ATD D G+NA+I YS++      + +F 
Sbjct: 618 DVNDHSPEFARQNYKATMLENMPAGTWVTKLHATDKDEGLNAKIRYSLF---GDKVERFY 674

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
           +DP +G + T   L   +   Y +T+ A D+      T V++++ V   N  +P F    
Sbjct: 675 VDPDTGDVSTMMPLDREQTAVYHLTLLAQDSSPTERATAVKLTIYVQDVNDNAPHFSSPR 734

Query: 160 YDVNVSEGASINSTV 174
           Y   +  G  + S V
Sbjct: 735 YTAYLPTGTHLGSFV 749



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 19/170 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+      +  QVIA+++     S  + +TV + D NDN+   P+  P Q  A  A  
Sbjct: 369 LDRE--QTSNYTLQVIAKDRGDPPRSSSIPVTVTVLDENDNS---PVFDPKQYSATVAEN 423

Query: 69  -----QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                 ++++ A D D G N  + YSI    +     F I    GVI     L    +  
Sbjct: 424 ASIGASVLQVSAMDRDEGANGRVRYSIAKGDDN--RDFTISEDGGVIRVAKNLNFERKPR 481

Query: 122 YSITVQATDT----GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           Y +T+   D     G KS     +V++ V   N  +PVF  + Y  +V E
Sbjct: 482 YYLTIHGDDCAAEVGEKSRSDTAQVTITVLDINDNAPVFLDSPYIAHVME 531



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 45   DINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            D NDN P    +  + + +  E    +++I ++D D+G NA ++YS  +  N G  KF I
Sbjct: 1034 DKNDNPPHFTRLFSVNVTENSEIGTFVIRITSSDLDIGQNANVSYSFTY--NPG-RKFSI 1090

Query: 104  DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
            D  SG +   G L   EQ  Y + + A D G   ++T + ++ +   N   P F + TY 
Sbjct: 1091 DALSGNVTVAGHLDREEQDEYLLKIVAVD-GAWRAETALTIT-IQDQNDNFPEFDETTYR 1148

Query: 162  VNVSE 166
             +  E
Sbjct: 1149 FHFPE 1153



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 24/182 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARR 68
            ++R  + A +          +LTVN++DINDN P          LP   P+         
Sbjct: 1430 EYRLNITATDLGFEPRQAVATLTVNVSDINDNPPTFNQSVYHAYLPENSPLD-------S 1482

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITV 126
             + K+ A D D    A + Y I  +   G+  FRI   +G I  E +       +Y + +
Sbjct: 1483 FVYKVVARDIDSPKYAVVQYKI--LGGNGMDHFRIHENTGEITSEISFNYEEANEYDLHI 1540

Query: 127  QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
             A +    + Q I   +V   + G N   P F Q  + ++VSE A + ++V  +  +   
Sbjct: 1541 VAANP-DSNPQMIGFTTVIVHITGVNEFYPKFVQPIFHMDVSESAEVGTSVGIVQATDQD 1599

Query: 184  SG 185
            SG
Sbjct: 1600 SG 1601



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 38   SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ V++  +N+  P+   P+      ++ E    +  ++ATD D G +  + Y     SN
Sbjct: 1556 TVIVHITGVNEFYPKFVQPIFHMDVSESAEVGTSVGIVQATDQDSGEDGRVYYLFVGSSN 1615

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG----KSSQTIVEVSVVPGPN 149
                 F I   +G+I  +  L    Q  +  TV A + GG     + +T V VS+  G +
Sbjct: 1616 D--RGFSIGAETGIIRVSRHLDRETQNRVVLTVMAKNGGGLRGNDTDETQVIVSIQDGND 1673

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
               P F Q+ Y+  VSEGA   + + T+
Sbjct: 1674 --PPEFLQSYYETTVSEGADYGTRLLTV 1699


>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
          Length = 3307

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 924  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 983

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 984  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1042

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1043 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1087



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 381 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 433

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 434 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARTAAAAAFEIDPRSGLIS 493

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 494 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 553

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 554 DVRPHTVVLRVTAT 567



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 719 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 777

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 778 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 833

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 834 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 880



 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRI+  SG I     L   +Q  Y++ + 
Sbjct: 874 VVVISASDDDVGENARITYFL----EDNLPQFRINADSGAITLQAPLDYEDQVTYTLAIT 929

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 930 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 983



 Score = 46.2 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP++G+I T   L   + E++ + V
Sbjct: 341 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQTGLIRTAAALDRESMERHYLRV 400

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  +PVF+Q  Y      NV EG  I    AT
Sbjct: 401 TAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQYRETLRENVEEGYPILQLRAT 455



 Score = 44.3 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 523 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 580

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 581 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 638

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 639 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 670



 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1047 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1103

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1104 VDGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1161

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1162 NSPVLNNFQILFNNYVSNRSD 1182


>gi|410917772|ref|XP_003972360.1| PREDICTED: protocadherin-23-like [Takifugu rubripes]
          Length = 3262

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 8/170 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
            ++  + A +K     S   ++ V + D+NDN P +P + P+ I         V  + T N
Sbjct: 2205 YKLVLQAADKGEPPLSSTATVRVQVVDVNDNIPAIPPMEPVVIAENRPAGHTVT-QVTAN 2263

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
            D+ +++ ITYS+    +T    F ID  +GV+  T  L   EQ  Y++TV A+D+     
Sbjct: 2264 DVDLSSTITYSLSAEGST-RSPFAIDQYTGVVTLTQALDYEEQAEYTLTVLASDS---LH 2319

Query: 137  QTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            QT  EV V V   N  +PVF +++Y V++SE A+ ++ V +++ +   SG
Sbjct: 2320 QTSGEVKVQVLDVNDNAPVFSKDSYQVDLSELAAADTLVLSVSATDRDSG 2369



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 22/167 (13%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVN 83
            EK+  A +V   + + + D NDN+P   + P +     E   A      + A DNDLG  
Sbjct: 2645 EKRRVAFTV---VFITVLDENDNSPHF-LFPVVNCSVLENLPAFTHTCSVHAVDNDLGPY 2700

Query: 84   AEITYSIYHVSNTGL----------HKFRIDPRSGVIET--TGKLIAGEQYSITVQATDT 131
             ++TYSI  +S+  L            F IDP +G I T  T       +Y   V+A D 
Sbjct: 2701 GQVTYSI--LSSCFLDYDSGSPEKKEAFAIDPLTGDIHTRQTFDYERENEYCFVVEAQDK 2758

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            GGKS+   V+VS + G +  SPVF Q  Y   + E +     V  +T
Sbjct: 2759 GGKSATVRVQVS-IKGVDEFSPVFTQKQYHFLLPENSKREDVVGFVT 2804



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 28/180 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR--------- 52
            L+ +   LDR+      F  +V AR+      S   ++  ++ D NDN PR         
Sbjct: 1671 LITTASYLDRE--QQPHFSLRVQARDSGSRPLSATATVLCSVLDDNDNPPRFMQSSFRVS 1728

Query: 53   LPM-IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
            LP  +PP  I            +A+D DLG N  I YSI      G   F ++ RSGV+ 
Sbjct: 1729 LPENLPPGAIHTA---------QASDPDLGENGTIHYSI--AGEDGAGCFVVNSRSGVVS 1777

Query: 112  TTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
            TT  L   E+  Y++T+ A + G    SS T +++ V+   N  +P F + +Y  +VSEG
Sbjct: 1778 TTKVLDREEKQNYTLTIWARNYGPAPLSSSTQLQL-VLLDQNDNAPSFSRKSYQASVSEG 1836



 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 11/181 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
           L VS++ +DRD    G+    ++ R +     S    + V + D+ND+AP   P    + 
Sbjct: 618 LCVSQD-IDRDL---GQTVHDILIRAEDPGGLSAQTYVHVEVEDLNDHAPVFNPDEYTVS 673

Query: 61  IQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--I 117
           I +  +   +++ + ATD D G   ++TY I     +GL  F +DP++G +  T  L  +
Sbjct: 674 ISSHAQPGAELLNVIATDRDSGRFGQVTYDIIPGDGSGL--FDVDPQTGTLTLTSPLADL 731

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP-VFQQNTYDVNVSEGASINSTVAT 176
              +  + V A D  G +S    EV+V    + ++P VFQ++ Y   V E A   ++V T
Sbjct: 732 GAARVKLLVTAQDGEGVTSARPAEVTVNVLHSAQAPAVFQRSRYTFTVPEDAPPGTSVGT 791

Query: 177 I 177
           +
Sbjct: 792 V 792



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 81/194 (41%), Gaps = 21/194 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----- 55
           Y +    +LDR+  +   +  +V A +      S  V   + + D ND  P         
Sbjct: 402 YALCVSADLDREEKD--LYELKVRASDLGSPPLSSEVVFLLRVTDTNDCRPVFEKDAYAV 459

Query: 56  -IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            +P    Q       +++++  D D G NA + YSI   +  GL    I+P SG+I T  
Sbjct: 460 SVPEDAPQGS----SLIRMQTRDADEGANAAVRYSILRSNQDGL--VSIEPESGLITTAA 513

Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
            L   A EQ    V A D G  S  +   V+V V   N   PVFQQ  Y+  V E + + 
Sbjct: 514 PLDREALEQLWFLVVAADGGEPSLSSTATVTVLVLDVNDNEPVFQQQLYNATVPEHSGVG 573

Query: 172 ST----VATITVSR 181
           S     VAT   SR
Sbjct: 574 SCFLQVVATDADSR 587



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            V + D+NDNAP        Q+   E   A   ++ + ATD D G+N EITY +    + G
Sbjct: 2327 VQVLDVNDNAPVFSK-DSYQVDLSELAAADTLVLSVSATDRDSGLNGEITYRLLSSPSQG 2385

Query: 98   LHKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               F I   SG +   +   ++  G    + V+A D G  +  +I  + V V   N   P
Sbjct: 2386 ---FYIQADSGSVFINKPIKEITNGNLIHLLVEARDGGDPALSSITSIDVQVLDTNDHVP 2442

Query: 154  VFQQNTYDVNVSEGASINSTVATIT 178
            +F Q  Y + V E    ++T+ T++
Sbjct: 2443 MFHQEVYSLTVPEDTPTDATLLTLS 2467



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 21/161 (13%)

Query: 19   FRFQVIA------REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIV 71
            F F V A      +E++  AA   V+  V L D+ND+ P        Q+ +  EA   + 
Sbjct: 1474 FAFTVTATDQASRKEERKQAA---VAAQVFLLDVNDDRPVFRSAVSAQVMEDAEAGSLLH 1530

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            +  + D D G N  ++Y+I   +  G+  F ++ ++G++  +  L    Q  + +T++A 
Sbjct: 1531 RFVSKDGDEGGNGLVSYTILTGNTKGV--FTLEEKTGLLFLSAPLDYEAQRLHHLTIRAA 1588

Query: 130  DTGG---KSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            D G     S+QT  VEV  V   N RSPVF QN Y+ +V+E
Sbjct: 1589 DHGLPPLSSTQTFTVEVGDV---NDRSPVFSQNIYNASVAE 1626



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 9/135 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVS 94
            + TV + D+ND +P             E R     +V++ ATD+D   NA + YS+  + 
Sbjct: 1600 TFTVEVGDVNDRSPVFSQ-NIYNASVAENRDPGEPVVRVSATDDDSEENAVVWYSL--LP 1656

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-SQTIVEVSVVPGPNTR 151
              G   F I+P +G+I T   L   +Q  +S+ VQA D+G +  S T   +  V   N  
Sbjct: 1657 GPGYELFSINPHTGLITTASYLDREQQPHFSLRVQARDSGSRPLSATATVLCSVLDDNDN 1716

Query: 152  SPVFQQNTYDVNVSE 166
             P F Q+++ V++ E
Sbjct: 1717 PPRFMQSSFRVSLPE 1731



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 20/189 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----I 56
           L+ +   LDR+     +  F V+A +    + S   ++TV + D+NDN P          
Sbjct: 508 LITTAAPLDREALE--QLWFLVVAADGGEPSLSSTATVTVLVLDVNDNEPVFQQQLYNAT 565

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK-FRIDPRSG---VIE 111
            P     G    Q+V  +A   + G    + YS+         H  F + P++G   V +
Sbjct: 566 VPEHSGVGSCFLQVVATDADSREFGT---LLYSLSDGFDGQERHPLFHVQPQTGELCVSQ 622

Query: 112 TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----G 167
              + +    + I ++A D GG S+QT V V  V   N  +PVF  + Y V++S     G
Sbjct: 623 DIDRDLGQTVHDILIRAEDPGGLSAQTYVHVE-VEDLNDHAPVFNPDEYTVSISSHAQPG 681

Query: 168 ASINSTVAT 176
           A + + +AT
Sbjct: 682 AELLNVIAT 690



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 7/118 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           + ++ ATD DLG N  ITY I    +     F I+  SGV+     L    Q  + + V 
Sbjct: 255 VCQVHATDLDLGDNGRITYEINRRQSDPNEVFSINRTSGVVYLNKPLDYEAQVFHELIVS 314

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTVATITVS 180
           ATD G +   +   V V V   N  SP    +F   T +  VSE A I   VA I+VS
Sbjct: 315 ATDNGAQPEYSSAFVGVKVLNINDHSPSISVLFLSETGEATVSEAAGIGDFVARISVS 372



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 10/114 (8%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNT 96
            ++++L D+NDNAPR         +  G+A    I+++ A+D D G+N +I YSI  VS  
Sbjct: 2120 VSISLLDVNDNAPRFDYSSYRTAVWEGQAHNTYIMQVFASDADGGINGQIEYSI--VSGD 2177

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK--SSQTIVEVSVV 145
                F +D   G++  T  L+  E    Y + +QA D G    SS   V V VV
Sbjct: 2178 PNQAFILDSVRGIL-ATNVLLDREITPSYKLVLQAADKGEPPLSSTATVRVQVV 2230



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 12/136 (8%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPI 59
            +L +S  NLD +      FR +V+AR     A +    LTV++ D+NDNAP     +   
Sbjct: 1033 WLYLS-HNLDYE--TESTFRCRVLARASPANATAT-AELTVSVLDVNDNAPVFSSEVYHF 1088

Query: 60   QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
             +    + + +V  + A D D G+NA+++Y +  +S+     FRI+ ++G I     L  
Sbjct: 1089 TVSEAPSPQGLVGTVSAVDKDSGINAQLSYIL--LSDGKF--FRINAKTGEIINWVALDR 1144

Query: 118  -AGEQYSITVQATDTG 132
                Q+++ V  TD G
Sbjct: 1145 EHHSQHTLKVMVTDQG 1160



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 41  VNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGL 98
           + + DINDNAP  L     I +        ++ I  A D+D G N  +    YH+ N   
Sbjct: 856 IAITDINDNAPVFLRTRDAISVSQNTLPGTVLFIAHAHDDDSGANGRVR---YHLRNNRY 912

Query: 99  HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
             F ID   G +     L+   Q  Y++ + A D G   +SS   + VSV       S  
Sbjct: 913 GMFGIDRDLGAVTLNQSLLVSSQQSYNLEIVAEDGGEPAQSSWLSLTVSVDRSAAEDSLA 972

Query: 155 FQQNTYDVNVSEGASINSTV 174
           F+   Y V + EG   +S V
Sbjct: 973 FETLVYQVEIGEGYRKDSRV 992


>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
          Length = 4557

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRESPMEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D GVN+ ITYS+Y  ++  +     IDP +G + T      +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGVNSRITYSLYSEASVSVADLLEIDPDNGWMVTKSNFHQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P    P F Q  Y  ++ E   I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PEILLPSFTQPQYSFSIPEDTVIGSTVD 2728

Query: 176  TITV 179
            ++ +
Sbjct: 2729 SLRI 2732



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN+P    +    +   +  + + I+KI A D D+G N +I YS+Y    +G 
Sbjct: 3017 VTVIDVNDNSPVCDQVAYTALFPEDIPSNKIILKISAKDADIGPNGDIRYSLY---GSGN 3073

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            +KF +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++   N   P+F
Sbjct: 3074 NKFFLDPESGELKTLA-LLDREKIPVYNLVARATDGGGRFCQSDIRL-ILEDVNDNPPIF 3131

Query: 156  QQNTYDVNVSEGASINSTVATI 177
              + Y+  V E  +  + +  +
Sbjct: 3132 SSDHYNACVYENTATKALLTRV 3153



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            E LD +  +  K    ++ R+++         + VN+ D ND++P    P+      ++ 
Sbjct: 1522 ERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFESA 1579

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQY 122
                 ++++ A D D G NAE+ YSI    NTG + F+I+P  G+I  + +  +    Q+
Sbjct: 1580 ALGSAVLQVTALDKDRGENAELLYSI-EAGNTG-NTFKIEPILGIITVSKEPDMTTMGQF 1637

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++++ TD G    S+  IV +SV    N+  P F Q  Y   V+E   I ++V  I+
Sbjct: 1638 VLSIKVTDQGTPPMSATAIVRISVTMSDNSH-PKFTQKEYQAEVNENVDIGTSVILIS 1694



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 VWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPVPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 15/155 (9%)

Query: 32   AASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            A S   ++T+ + DINDN P       L  +P    +      +++ + AT  D+G NAE
Sbjct: 3215 ALSSLATVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTEVLAVFATSKDIGTNAE 3270

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
            ITY I   +  G  KF I+P++G I     L     + + + V+A D G  +   +  V+
Sbjct: 3271 ITYLIRSGNERG--KFMINPKTGGISVIDSLDYEMCKDFYLVVEAKDGGTPALSAVATVN 3328

Query: 144  V-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + +   N  +P F Q  Y   +SE ASI  +V  +
Sbjct: 3329 INLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVL 3363



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAP-RLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LT+N+ D NDN P  L     + I ++     +I+++EA D DLG N E+TYS+     T
Sbjct: 817 LTINVEDANDNRPIFLQESYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL----T 872

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGKSSQTIVEVSV-VPGPNTR 151
              +F I+  +G++    +L   +   YS+ ++A D    G+   ++V + V +   N  
Sbjct: 873 DAQQFSINSSTGIVYVADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVFLDDVNDC 932

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           SP F   +Y V V E   + + +A +
Sbjct: 933 SPTFIPTSYSVKVLEDLPVGTVIAWL 958



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VIYTADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFVINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ V V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 17   GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
              F F V  R+    Q TA S P  + + + D+NDN P     +   + +       +I+
Sbjct: 1845 AHFHFHVHVRDSGNPQLTAES-PAEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEIL 1903

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
            K++ATD D  V AE+TYS+   S   +  F ID  SGV+      ++ + Y + V+ +D 
Sbjct: 1904 KVQATDPDSEVPAELTYSLMEGS---VDYFLIDSSSGVLSIKNSSLSKDHYMLIVRVSD- 1959

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1960 -GKFYGTAMVTIMVKEAMDSGLHFTQSFYFASISENSTNITKVAIV 2004



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 43   LNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            + DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TYS+         
Sbjct: 2074 IEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVSALDRDKGANGEVTYSL----QEDYG 2128

Query: 100  KFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
             F I+P SG +   E     ++  +Y + + A D G  +    +E+ +    N   PVF 
Sbjct: 2129 HFEINPESGSVFLKEAFNSDLSNIEYGVIILAKDGGKPALSASIELPITI-VNKAMPVFD 2187

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +  Y  +V+E   +++ + +I
Sbjct: 2188 KPFYTTSVNEDIEMHTPILSI 2208



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 11/169 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F   V A++    A S   ++ +NL D+NDNAP+    +   +  +       ++ + A 
Sbjct: 3307 FYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVLIAE 3366

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG 132
            D D   N +I +SI  VS    ++F +D   G+I+   KL    ++G  YS+ +QATD+G
Sbjct: 3367 DVDSPPNGQIRFSI--VSGDRDNEFAVDSVLGLIKVKKKLDRERVSG--YSLLIQATDSG 3422

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +  + V V++ +   N   PVF    Y   + E   + +++  + V+
Sbjct: 3423 IPAMSSTVTVNIDISDVNDNGPVFTPANYTAVIQENKPVGTSILQLMVT 3471



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++AR   G        + + L D+NDN P            +    +  + +++ATD 
Sbjct: 3099 YNLVARATDGGGRFCQSDIRLILEDVNDNPPIFSSDHYNACVYENTATKALLTRVQATDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            DLG+N ++ YS+   +++    F +D  SG+I     L    Q  Y+I+V+A+D      
Sbjct: 3159 DLGINRKVVYSL---ADSAGGYFSVDSSSGIIILEQPLDRELQSSYNISVKASDQSILKA 3215

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS   V ++V+   N   PVF++  Y V V E  S  + V  +
Sbjct: 3216 LSSLATVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTEVLAV 3258



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 21   FQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            F++  R     T A   V++ + +ND+NDN P    P       +A      ++++ A+D
Sbjct: 2254 FKLTVRASDALTGARAEVTVDLLINDVNDNPPIFNQPAYNATLSEASLIGTPVLQVVASD 2313

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG- 133
             D   N  + Y I   +      F ID  SG+I  T +++  E   Q ++ V+ATD G  
Sbjct: 2314 ADSENNKVVQYQIVQDTYNSTDYFHIDSTSGLI-LTARMLDHESVQQSTLKVRATDNGFP 2372

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS+ +V + V    N   P+F Q  Y+  VSE A     V  +  S
Sbjct: 2373 PMSSEVLVNIYVT-DMNDNPPIFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 7/135 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
            +V   + LDR+       + +   R + G      V+L V L+D+ND +P  +P    ++
Sbjct: 885  IVYVADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVFLDDVNDCSPTFIPTSYSVK 944

Query: 61   I-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            + +       I  +E  D DLG+  ++ Y++ +  N    +F ID  SG I  + +L   
Sbjct: 945  VLEDLPVGTVIAWLETHDPDLGLGGQVRYTLVNDYNG---RFEIDKASGAIRLSKELDYE 1001

Query: 120  EQ--YSITVQATDTG 132
            +Q  Y++TV+A D G
Sbjct: 1002 KQQFYNLTVRAKDKG 1016



 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 10/151 (6%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P         I ++      ++++++A D D G N ++TY+++  S
Sbjct: 2798 VDIEIKVLDLNDNKPFFDASSYEAIIMEGMPIGTRLIQVKAIDRDWGANGQVTYALHSDS 2857

Query: 95   NTG--LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPG 147
            +    +  F ID  +G I T   L       ++ +V A+D G     SS  +V V+V   
Sbjct: 2858 SPEKIMEVFSIDSNTGWISTLKDLDHERDPTFAFSVVASDLGEAFSLSSTILVSVTVT-D 2916

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             N  +PVF    Y   V E       VA ++
Sbjct: 2917 INDNAPVFGHEMYREQVKESDPPGEVVAVLS 2947



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            +I+++EATD D     +++Y+I+  + +  + KFRID  +GV+    +L   A +++ + 
Sbjct: 1478 EILQVEATDRD--EKHKLSYTIHSSIDSVSMRKFRIDASTGVLYIAERLDHEAQDKHILN 1535

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +   D      + +  V V V   N  SP F    Y+ +V E A++ S V  +T
Sbjct: 1536 IMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFESAALGSAVLQVT 1589



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T++L D ND+ P    P       ++      ++ + A+D D G N  ITYSI  +S  
Sbjct: 458 VTISLEDANDHTPEFQQPSYEAFVNESVPVGTSVLSVSASDKDKGENGYITYSIASLSAL 517

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
               F I+  +GVI TT +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 518 ---PFSINQFTGVIRTTEELDFESSPENYRFIVRASDWGSPYRHESEVNVTIRIGNVNDN 574

Query: 152 SPVFQQ 157
            P+F++
Sbjct: 575 RPLFEK 580



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVIYTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  I ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + V A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEVLAVDRGMK 239



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI T  K +  E+   Y + VQAT+  G +S   V + +V   N   P+F  
Sbjct: 1714 FTINPYSGVI-TNQKALDYERISSYQLIVQATNMAGMASNATVNIQIV-DENDNPPIFLF 1771

Query: 158  NTYDVNVSEGASINSTV 174
            + Y  ++SE A INS V
Sbjct: 1772 SHYSGSLSEVAPINSIV 1788



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITV 126
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +   EQ   Y + +
Sbjct: 745 ILKIKAFDADSGFNGKVVFTISD-GNTD-SCFNIDMETGQLKVLMPM-DREQTDLYLLNI 801

Query: 127 QATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              D G   KSS  ++ ++V    + R P+F Q +Y VN+ E +SI + +  +
Sbjct: 802 TIYDLGRPQKSSWRLLTINVEDANDNR-PIFLQESYSVNILESSSIGTEIIQV 853



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 37   VSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
            V + + + D+NDN P    +I    +     R   V  ++A+D D      + YSI  +S
Sbjct: 2378 VLVNIYVTDMNDNPPIFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSI--LS 2435

Query: 95   NTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
                  F +D +SG+I  +   K      YS+ V  +D G  +S   V + ++ G N  S
Sbjct: 2436 GNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRIL-GANLYS 2493

Query: 153  PVFQQNTYDVNVSEGAS 169
            P F Q+TY   V E A+
Sbjct: 2494 PAFSQSTYVAEVRENAA 2510



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 10/101 (9%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
            +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+  S
Sbjct: 2514 KVIHVRATDGDPGAYGQISYTI--INDFAKDRFLIDSNGQVI-TTERLDRESPMEGD-IS 2569

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
            I ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2570 IFLRALDGGGRTTFCTVRVIVV-DENDNAPQFLTVEYRASV 2609



 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           L V++  IN++AP + ++  I      E    +V ++  D D G N EI  SI  V+   
Sbjct: 252 LYVHIERINEHAPTISVVTHIPFSLDKEPTYAVVNVD--DLDEGANGEIE-SISIVAGDP 308

Query: 98  LHKFRIDPRSGVIETTG----KLIAGEQ----YSITVQATDTGGKSSQTIVEVSVVPGPN 149
           L +F +      I        K I  E     Y++T+QA D G     + V+V  +  P 
Sbjct: 309 LEQFLLVKEGKWINEYKIKERKSIDWESFPYGYNLTLQAKDKGSPQKFSAVKVVHIANPQ 368

Query: 150 TRS-PV-FQQNTYDVNVSEGASINSTVATITVS 180
             + PV F++ TY+V +SE +     VA + +S
Sbjct: 369 KDNIPVRFEKETYNVTISEFSPPGVVVAIVKLS 401



 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 12/175 (6%)

Query: 10   DRDPPNPGKFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            +RDP     F F V+A +  +  + S  + ++V + DINDNAP     +   Q++  +  
Sbjct: 2884 ERDP----TFAFSVVASDLGEAFSLSSTILVSVTVTDINDNAPVFGHEMYREQVKESDPP 2939

Query: 68   RQIVKIEAT-DNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
             ++V + +T D D   +N +++Y I   +  G     +      +     L   EQ  Y 
Sbjct: 2940 GEVVAVLSTWDEDTSDINQQVSYHITGGNPRGRFALGLVQNEWKVYVKRPLDREEQDVYF 2999

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + + ATD G   +Q +VEV+V+   N  SPV  Q  Y     E    N  +  I+
Sbjct: 3000 LNITATD-GLFVTQAMVEVTVI-DVNDNSPVCDQVAYTALFPEDIPSNKIILKIS 3052



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L     E Y + V +   G  S+Q  + +      N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLDVSRKEVYELGV-SNKEGDLSAQVTISLE---DANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
           +Y+  V+E   + ++V +++ S    G
Sbjct: 476 SYEAFVNESVPVGTSVLSVSASDKDKG 502


>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
            [Microtus ochrogaster]
          Length = 3310

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 922  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 981

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 982  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1040

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1041 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1085



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 379 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 431

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 432 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPRSGLIS 491

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 492 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 551

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 552 DVRPHTVVLRVTAT 565



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 872 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 927

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 928 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 981



 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 717 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 775

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 776 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 831

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 832 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 878



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 314 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSI 373

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 374 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 432

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 433 YRETLRENVEEGYPILQLRAT 453



 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 521 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANGLVHYN 578

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 579 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 636

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 637 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 668



 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1045 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1101

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1102 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1159

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1160 NSPVLNNFQILFNNYVSNRSD 1180


>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
 gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
          Length = 2676

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 20/189 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPI 59
            V S + LD +  +   FR  ++A  +   + +  + L +N+ D NDN+P      M+  +
Sbjct: 2019 VASADALDYE--STKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQL 2076

Query: 60   QIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                G  + R +VK+ ATD D G N ++TYSI+  +  G+  F ID  +G I TT KL+ 
Sbjct: 2077 AEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGV--FTIDSTTGEI-TTAKLLD 2133

Query: 119  GE---QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GAS 169
             E    + + ++ TD+G   KS+   V+V VV   N   P+F   + +VN+ E    GA 
Sbjct: 2134 RETTASFDLVIRGTDSGIPPKSTNCQVKV-VVTDLNDNPPLFDPLS-EVNIREDTRTGAV 2191

Query: 170  INSTVATIT 178
            + S VAT T
Sbjct: 2192 VTSVVATDT 2200



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
            VS+T+ + D+NDN P   +  P  +Q  E      ++ +I ATD D G NA +++++  +
Sbjct: 2496 VSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTV--I 2553

Query: 94   SNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKS-SQTIVEVSVVPGP 148
              TG   F ID  SG + T         A  QYS+T++ATD G    S  I  +  V   
Sbjct: 2554 GGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADE 2613

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +   P F +  Y  +V   A I   V  +T +   SG
Sbjct: 2614 DEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSG 2650



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 11/180 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
           ++ +  +LDR+     +    V+  ++     S   S+ VNL D NDN P          
Sbjct: 449 MITTATDLDRE--QIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNAS 506

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +   +   +V++ A D D+G N+ I YSI    NT    F +DPR G++  +  L   
Sbjct: 507 LFENSPSGSPVVQLLAQDPDIGENSLILYSIL-TPNT---PFFLDPRKGLVTNSRTLDHE 562

Query: 120 EQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Q  Y+  V ATD GG+S    V VS+    N   PVF  ++Y V   E   I  ++  +
Sbjct: 563 VQSSYTFQVAATDGGGRSCNATVHVSLT-DLNDNQPVFDPSSYSVEYFENTRIGQSICQL 621



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 20/198 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---- 57
           LVV+  ++  D      +   + A +    A    + L++ + D NDN P    +     
Sbjct: 121 LVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGT 180

Query: 58  -PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P  I  G +   I+++ A+D D+G NAEI YSI   S+     F I P +GVI    +L
Sbjct: 181 IPENIDVGTS---ILQVSASDKDIGTNAEIQYSIETHSDPQA-IFGIHPTTGVIVNNVRL 236

Query: 117 I--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDV----NVSEG 167
              A   Y I V+A D G     SS  IV + V+   N  +PV    +Y +     V+E 
Sbjct: 237 DYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVL-DVNDNNPVIHV-SYTLGGSYQVTEN 294

Query: 168 ASINSTVATITVSRLASG 185
           A+I + VA ++VS   SG
Sbjct: 295 ATIGTQVARVSVSDADSG 312



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 9/174 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQ 60
           ++   ++LDR+  +   F  + +  +K     +   S  +N+ D+ND AP+        +
Sbjct: 340 IIAVGQSLDRETHD--HFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETR 397

Query: 61  IQAGEARRQIVKI-EATDNDLGVNAEITYSIYHV--SNTGLHKFRIDPRSGVIETTGKLI 117
           +        +V I  A D D G N+E+ Y+I +   S + LH F IDP SG+I T   L 
Sbjct: 398 VWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLD 457

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
             +  Q  +TV   D G         V V +   N   P F Q++Y+ ++ E +
Sbjct: 458 REQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENS 511



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 7/122 (5%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---ETTGKLIAGEQYSITV 126
            I+++ ATD D G NA+I YS + ++N+    ++ID  +GVI    T    I      I V
Sbjct: 2220 ILRVSATDQDSGSNAQIKYS-FPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPV 2278

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            QA D G    + +V V ++    TR P F+  +Y   V E A + ++V T+ V+  A+G 
Sbjct: 2279 QAMDQGVPPQRALVYVRIII---TREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGL 2335

Query: 187  AI 188
             +
Sbjct: 2336 PL 2337



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG 64
            K  LDR+  +  ++  +VIA +      S    + V ++D+NDN P          ++  
Sbjct: 971  KSKLDRE--DIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKEN 1028

Query: 65   E-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            E     +  + A+D+D G N  +TY      +T + +F +D ++G I T+  L   A   
Sbjct: 1029 EPVATYLGAVSASDSDEGSNGHVTYRF----DTQVAQFIVDKQTGKITTSQVLDREAKAS 1084

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            Y  ++ ATD G        +V+V V   N  SP F +N Y V V+E   + S++ T+
Sbjct: 1085 YVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTL 1141



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 24/184 (13%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTV--NLNDINDNAPRLPMIPPIQIQAGEARRQ------ 69
            K RF ++      TA S PV + V  N++D+ND  P          Q+G   +       
Sbjct: 2370 KRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFG-------QSGYMAQWSEGIPV 2422

Query: 70   ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
               +V + A D D G N  + ++I    + G   F ID ++GVI T   L     + + +
Sbjct: 2423 GTIVVNVSAADKDSGANGRVWFAIQSGDDKG--SFAIDRKTGVIRTQRALDHETIKTHHV 2480

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQ-QNTYDVNVSEGASINSTVATITVSRL 182
            +V+ATD G     T V V++ V   N   PVF+     DV V E   +NS +  I  +  
Sbjct: 2481 SVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDR 2540

Query: 183  ASGC 186
             SG 
Sbjct: 2541 DSGA 2544



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 21/182 (11%)

Query: 23   VIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRL--PMIPPIQIQAGEAR 67
            ++ REK+         T  S P      S+ +N+ D NDN P+   P++  +++      
Sbjct: 1603 ILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVT-LKVPENSPA 1661

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
            R I  +   D D G N ++ YSI   +  G   F I   +G + TT KL       Y ++
Sbjct: 1662 RLIYTLTVQDLDYGNNTKVLYSIMSGNTDG--AFTIGRSTGELSTTTKLDRETKASYQLS 1719

Query: 126  VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            VQA D           +++ +   N   PVFQQ+ Y   +SE     +++  +T S   S
Sbjct: 1720 VQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDS 1779

Query: 185  GC 186
            G 
Sbjct: 1780 GS 1781



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 15/176 (8%)

Query: 21   FQVIAREKQGTAASVPVS-LTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIE 74
              V+A +K G  +   ++ + +N+ D+NDN P           P ++  G     +  + 
Sbjct: 1191 LHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSV---VAAVL 1247

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A D+D G N ++ Y I + +  G   F+I+  +GVI T   L      +Y + V ATD G
Sbjct: 1248 AVDSDQGDNGKVRYKIVNGNTDG--TFKINETTGVISTLRALDFEVTNRYVLRVSATDMG 1305

Query: 133  GKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             K  +T  ++    V   N   P F +N     + E   IN+ V TI      SG 
Sbjct: 1306 KKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGL 1361



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 26/185 (14%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPP 58
            LDR+      ++  V A++      +   ++T+ + D NDN P             + PP
Sbjct: 1708 LDRE--TKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPP 1765

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
                       I+ + A+D D G N  I Y++   SN     + ID R+G++ +  +   
Sbjct: 1766 --------GTSILNLTASDKDSGSNGNIVYTL---SNDTYGVYSIDSRTGIVYSAARFET 1814

Query: 119  G--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               ++Y+    A D G      IV V + +   N  +P F +  Y+V++    S ++ V 
Sbjct: 1815 SIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVT 1874

Query: 176  TITVS 180
             +T +
Sbjct: 1875 MVTAT 1879



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 4/62 (6%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            +VK+ A D D G NAE+TYSI   S   + KF ID  SG+I T   L     + Y +TV 
Sbjct: 1560 VVKVTAYDRDSGSNAELTYSI--PSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVH 1617

Query: 128  AT 129
            AT
Sbjct: 1618 AT 1619



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +L + + D+NDNAP+        +   E    Q+  I A D D G    + Y I    +T
Sbjct: 1423 TLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVS-PDT 1481

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
            G  KF +D ++GV++  G L   +  QY++ + ATD G
Sbjct: 1482 G--KFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLG 1517



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 9/111 (8%)

Query: 24   IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLG 81
            + +++Q T+  +   +T+ + D NDN P     P I    +       +  I+A D+D G
Sbjct: 1304 MGKKQQKTSYQL---VTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSG 1360

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
            +N+ I Y+I   S +    F+I+  +G+I+TT  +   E  +YS+ V+ATD
Sbjct: 1361 LNSRIWYTI--DSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATD 1409


>gi|349990035|dbj|GAA42275.1| protocadherin-11 X-linked [Clonorchis sinensis]
          Length = 996

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 27/213 (12%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSL-TVNLNDINDNAP-------- 51
           Y + S   LDR+  NP + R  +  R+  G    V   L  VN++D+NDNAP        
Sbjct: 455 YQLYSTLPLDRES-NP-EVRVTLRCRD-HGVPGRVSTELLMVNISDVNDNAPMFMNHRYS 511

Query: 52  ----------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
                     R  M   + ++  +    I  + A D D GVNAE++YSI   +N GL+ F
Sbjct: 512 FQANPVPRDGRCSMSWLLDVEGNDQDELIGLVTAVDADSGVNAELSYSIIWPNNQGLNPF 571

Query: 102 RIDPRSGVIE--TTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQ 157
            I+ R  +    T  +    E +  TV A D G    S+   VEV+++   N  SP F Q
Sbjct: 572 TINARGEIRARMTLDRESRPEGFQFTVLAKDNGVPNLSALAKVEVALI-DVNDCSPTFTQ 630

Query: 158 NTYDVNVSEGASINSTVATITVSRLASGCAIMN 190
             Y   V E    N + A +     A+ C I N
Sbjct: 631 GVYHFTVEEEIPFNLSNAYVIGLVKATDCDIGN 663



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 27/192 (14%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIP 57
           ++  LDR+   P  F+F V+A++      S    + V L D+ND +P          +  
Sbjct: 581 ARMTLDRES-RPEGFQFTVLAKDNGVPNLSALAKVEVALIDVNDCSPTFTQGVYHFTVEE 639

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            I      A   I  ++ATD D+G NA+I Y +          F+I    G + TT + I
Sbjct: 640 EIPFNLSNA-YVIGLVKATDCDIGNNAQIFYQLEATD----APFQIS-SDGYLSTT-RPI 692

Query: 118 AGEQ---YSITVQATDTGGKSSQTI-----VEVSVVP----GPNTRSPVFQQNTYDVNVS 165
             EQ   + IT+QATD+   + + +     V+++VV      P    P F+  T+ V +S
Sbjct: 693 DREQSSSFVITIQATDSPQITERRLSSFAEVQITVVDINDNDPIFLRPPFENGTHQVALS 752

Query: 166 EGASINSTVATI 177
               IN  V  I
Sbjct: 753 IYEDINYKVVKI 764



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 45  DINDNAPRLPMIPPIQIQAGEA--------RRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           DINDN P + + PP +    +           ++VKIEA D D+  N EI + + +    
Sbjct: 729 DINDNDP-IFLRPPFENGTHQVALSIYEDINYKVVKIEAIDKDIERNGEIRFKLANDVPR 787

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQ--ATDTGGK--SSQTIVEVSVVPGPNTR 151
           G+  F ++P SG +    KL   E   I ++  A D G K  ++ T +E+     P T+
Sbjct: 788 GM--FALNPESGELTLKRKLTVEEAGIIPLRILAIDNGLKPRTATTTIEILAADVPATK 844


>gi|262263237|tpg|DAA06614.1| TPA_inf: protocadherin gamma b12 isoform [Anolis carolinensis]
          Length = 939

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 7/188 (3%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           +V K+ LD +  +   F   ++A +   +  +  V + + + D+NDN+P     +  + +
Sbjct: 195 LVLKKQLDHE--SESIFHLTLMALDGGKSLKTGTVKIWITVIDVNDNSPVFSQELYTVNL 252

Query: 62  QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIA 118
           +    RR  +V+++ATD D G N ++TY+  ++      KF +D + G   I+       
Sbjct: 253 KENTPRRSLVVQVKATDKDAGSNGQVTYNFRNIPERARQKFSLDSKDGKITIKEALDFEE 312

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            E+Y + V+A D GG ++ + VE+ V+   N  +P     +    + E ++  + VA I 
Sbjct: 313 SERYLVAVEARDGGGLATHSKVEIKVL-DENDNAPEVVLASLSSPIPEDSATGTLVALIN 371

Query: 179 VSRLASGC 186
           +    SG 
Sbjct: 372 IKDRDSGA 379



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 27/162 (16%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI----YHV 93
           V + D+NDNAP   +   I+++  E        +  +A D D+G+N    YS+    Y V
Sbjct: 122 VEVQDVNDNAPYF-LHGDIKLEISELTLPGATFLLEQAEDPDIGMNTIQNYSLDTNQYFV 180

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--------YSITVQATDTGGKSSQT-IVEVSV 144
            +        + +SG  +T  KL+  +Q        + +T+ A D GGKS +T  V++ +
Sbjct: 181 LDM------TERQSG--KTYVKLVLKKQLDHESESIFHLTLMALD-GGKSLKTGTVKIWI 231

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V   N  SPVF Q  Y VN+ E     S V  +  +   +G
Sbjct: 232 TVIDVNDNSPVFSQELYTVNLKENTPRRSLVVQVKATDKDAG 273


>gi|158298604|ref|XP_001238041.2| AGAP009725-PA [Anopheles gambiae str. PEST]
 gi|157013964|gb|EAU76025.2| AGAP009725-PA [Anopheles gambiae str. PEST]
          Length = 1325

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 24/189 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREK-------QGTAASVPVSLTVNLNDINDNAPRLP----MIP 57
            LDRD     K+   V A +          T  +    + V + D+NDN P         P
Sbjct: 847  LDRD-----KYELNVTAMDDGSCCVNGDATIHTSTAVVVVFITDVNDNKPVFKDCGTYYP 901

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             ++ +       ++K++ATD D GVN ++ YSI    N    KF +D  +G + +T K+ 
Sbjct: 902  KVE-EGAPNGSPVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEV-STNKVF 959

Query: 118  -----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASIN 171
                  G+  S+TV+ATD G  S + +   +V +   N   P+F +  Y  NV + ASI 
Sbjct: 960  DREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIG 1019

Query: 172  STVATITVS 180
            + +  ++ S
Sbjct: 1020 TNILRVSAS 1028



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 633 LAKELDFEDLRQPHVYSLVVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 690

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 691 VDEDIPLGTSILKVKAMDSDSGANAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 743

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G  +      V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 744 NNNAYYEFVVTAKDKGEPAKTGTATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 803

Query: 176 TITVS 180
           T+  S
Sbjct: 804 TVVAS 808


>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
          Length = 4557

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 14/145 (9%)

Query: 45   DINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI   ++ G  
Sbjct: 1247 DENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDG-- 1303

Query: 100  KFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV--- 154
            KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P T SPV   
Sbjct: 1304 KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKP-TPSPVPLT 1362

Query: 155  FQQNTYDVNVSEGASINSTVATITV 179
            F +  Y+  V E   +   V  ++V
Sbjct: 1363 FDEPFYNFTVMESDKVTEIVGVVSV 1387



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            F ++   K G   ++    TVN+N  D+NDNAP+   +    + + +A     ++ + A 
Sbjct: 3308 FYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISEDAAIGDSVIMLIAE 3367

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG 132
            D D   N +I +SI  VS    ++F +DP SG+++   KL    I+G  YS+ +QA D+G
Sbjct: 3368 DLDSPSNGQIHFSI--VSGDQDNEFSVDPGSGLVKVKKKLDRERISG--YSLVIQARDSG 3423

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                 + V V+V +   N  SPVF    Y   + E   + +++  + V+
Sbjct: 3424 TPPLSSSVTVNVDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVT 3472



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 12/151 (7%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITY 88
            T A+V V++T    D+NDN+P    +    +   +  + + I+KI A D D+G N +I Y
Sbjct: 3012 TQAAVEVTVT----DVNDNSPVCEQVAYTALFPEDIPSNKVILKISAKDADIGSNGDIRY 3067

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVP 146
            S+Y     G +KF +DP +G +++   L   +   Y++  +ATD GG+  Q+ + + ++ 
Sbjct: 3068 SLY---GPGNNKFFLDPENGELKSLAPLDREKIPVYNLVARATDGGGRFCQSEIHL-ILE 3123

Query: 147  GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   PVF  + Y   V E  +  + +  +
Sbjct: 3124 DVNDNPPVFSSDHYTACVYENTATKALLTRV 3154



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    V+ R+++         + +N+ D ND++P    P+    
Sbjct: 1518 VLYTAERLDHEAQD--KHILNVMVRDQEFPYRRNLARVIINVEDSNDHSPYFTSPLYEAS 1575

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  L 
Sbjct: 1576 VYESAAVGSAVLQVTALDKDKGENAELVYTI-EAGNTG-NTFKIEPVLGIITLLKEPDLT 1633

Query: 118  AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++V+  D G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1634 TMGQFVLSVKVADQGSPPLSATAIVRISVTMADNSH-PKFTLKEYQAEVNENVDIGTSVI 1692

Query: 176  TIT 178
            +++
Sbjct: 1693 SLS 1695



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 12/185 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---PPI 59
            +++ E LDR+  N  +    +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2553 ILTTERLDRE--NLLESDIGIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2610

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL-- 116
            +   G+    + +++A D D G N+ ITYS+Y  ++  +     IDP +G + T G    
Sbjct: 2611 KADVGKGYL-VTQVQAVDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGSFNQ 2669

Query: 117  IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +     S  V+A D G   K S   V + V+P P T  P F Q  Y   ++E   I ST+
Sbjct: 2670 LKNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETILPSFSQPQYSFTLAEDTLIGSTI 2728

Query: 175  ATITV 179
              + +
Sbjct: 2729 DIVHI 2733



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV +T+ + D+NDN P     +   + + 
Sbjct: 1839 NLDHE--TIAHFHFHVHVRDSGNPQLTAES-PVEVTIEVTDVNDNPPVFSQAVFETVLLL 1895

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K++ATD D  +  E+TYS+       +  F ID  +GV+      ++ + Y
Sbjct: 1896 PTYVGVEVLKVKATDPDSEIPPELTYSLIE---GNMDHFLIDSNTGVLTIKNNSLSKDHY 1952

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F QN Y  ++SE  +  + +A +
Sbjct: 1953 MLIVRVSD--GKFYSTAMVTIMVKEAMDSGLHFTQNFYSTSISENTTNITKIAVV 2005



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 15/156 (9%)

Query: 38   SLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            ++T+ + DINDN P       L  +P    +      +++ + AT  D+G NAEITY I 
Sbjct: 3222 TVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTEVLSVFATSQDIGTNAEITYLIR 3277

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +  G  KF I+ ++G I  +  L   + + + + V+A D G  +   +  V+V V   
Sbjct: 3278 SGNEKG--KFNINSKTGAISISESLDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDV 3335

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            N  +P F Q  Y   +SE A+I  +V  +    L S
Sbjct: 3336 NDNAPKFSQVVYSAVISEDAAIGDSVIMLIAEDLDS 3371



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 27/154 (17%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LTV + D NDN P       +Q       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 818 LTVTVGDANDNKPIF-----LQDSYSVNILESTSLGTEIIQVEARDKDLGSNGEVTYSVL 872

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVP--- 146
               T   +F I+  +GV+    +L       Y++ ++A D      Q   + SVVP   
Sbjct: 873 ----TDTQQFAINSSTGVVYVADQLDRETKANYTLKIEARDKAESGHQ---QFSVVPLKV 925

Query: 147 ---GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                N  SP F  ++Y+V V E   + + +A +
Sbjct: 926 FLDDVNDCSPAFIPSSYNVKVLEDLPVGTVIAWL 959



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 10/168 (5%)

Query: 21   FQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATD 77
            F+++ R     T A   V++ + +ND+NDN P            +A      ++++ ATD
Sbjct: 2255 FKLMVRASDALTGARAEVTVDLVINDVNDNPPVFDQSAYNATLSEASLIGTPVLQVVATD 2314

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGK 134
             D   N  + Y I   +      F ID  SG+I  T +++  E   Q S+ V+ATD G  
Sbjct: 2315 ADSDNNKIVQYQIVQDTFNSTDYFHIDSTSGLI-LTARMLDHELIQQCSLKVRATDNGFP 2373

Query: 135  --SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS+ +V +S+    N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2374 PLSSEVLVSISIT-DMNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2420



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEA D D     +++Y+I+  +    + K
Sbjct: 1453 DNNDNGPEFSQ-PSYDVTISEDILPDTEILQIEAIDRD--EKHKLSYTIHSSIDAISMRK 1509

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + V   D      + +  V + V   N  SP F  
Sbjct: 1510 FRIDPSAGVLYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIINVEDSNDHSPYFTS 1569

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1570 PLYEASVYESAAVGSAVLQVT 1590



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + ++AR   G        + + L D+NDN P            +    +  + +++ATD 
Sbjct: 3100 YNLVARATDGGGRFCQSEIHLILEDVNDNPPVFSSDHYTACVYENTATKALLTRVQATDP 3159

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            D+GVN ++TYS+   +++    F +D  SG+I     L    Q  Y+I+V+A+D      
Sbjct: 3160 DVGVNRKVTYSL---ADSADGYFSVDRSSGIIILEHPLDRELQSSYNISVKASDQSIVLT 3216

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS   V ++V+   N   PVF++  Y V V E  S  + V ++
Sbjct: 3217 LSSFATVTITVL-DINDNPPVFERRDYLVTVPEDTSPGTEVLSV 3259



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F I+P SGVI T+ K +  E    Y +TVQAT+  G +S   V + +V   N   PVF  
Sbjct: 1715 FTINPYSGVI-TSQKALDYEHASFYQLTVQATNMAGMASNATVNIQIV-DENDNPPVFLF 1772

Query: 158  NTYDVNVSEGASINSTV 174
            + Y  ++SE A INS V
Sbjct: 1773 SQYSGSISEAAPINSIV 1789



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 12/141 (8%)

Query: 43   LNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            + DINDNAP    LP    +Q+ A E    I ++ A D D   N +++Y +         
Sbjct: 2075 IEDINDNAPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKDENGDVSYLL----KEDYG 2129

Query: 100  KFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
             F ID  +G +   E     ++  +Y + + A D G  S    VE+ +    N   PVF 
Sbjct: 2130 HFEIDRGTGSVTLKEAFNSDLSNIEYLVVILAKDGGNPSLSASVELPITI-VNKAMPVFD 2188

Query: 157  QNTYDVNVSEGASINSTVATI 177
            +  Y  +V+E   I++ + +I
Sbjct: 2189 KPFYTASVNEDVEIHTPILSI 2209



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPRLPMIP-P 58
            +V   + LDR+      +  ++ AR+K   G      V L V L+D+ND +P    IP  
Sbjct: 886  VVYVADQLDRE--TKANYTLKIEARDKAESGHQQFSVVPLKVFLDDVNDCSPAF--IPSS 941

Query: 59   IQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              ++  E       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +
Sbjct: 942  YNVKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKE 998

Query: 116  LIAGEQ--YSITVQATDTG 132
            L   +Q  Y++TV+A D G
Sbjct: 999  LDYEKQQFYNLTVRAKDKG 1017



 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 46  INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           +N  AP      P  +   E       I++I+A D D G N ++ Y+I          F 
Sbjct: 719 VNRQAPHFDKTFPTDVMVSEDLPVGATILRIKAYDADSGFNGKVVYTI--SDGNADSCFN 776

Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN 158
           ID  +GV++    L     + Y + +   D G   KS+  ++ V+V    N   P+F Q+
Sbjct: 777 IDIETGVLKVLMPLDREKTDLYILNITIYDLGNPQKSAWRLLTVTV-GDANDNKPIFLQD 835

Query: 159 TYDVNVSEGASINSTVATI 177
           +Y VN+ E  S+ + +  +
Sbjct: 836 SYSVNILESTSLGTEIIQV 854



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  I ++ ATD D+G N E  Y  Y  S   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADIGSNGEFYY--YFKSKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 8/156 (5%)

Query: 34   SVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIY 91
            S  V +++++ D+NDN P    +I    +     R   V  ++A+D D      + YSI 
Sbjct: 2376 SSEVLVSISITDMNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSI- 2434

Query: 92   HVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
             +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + ++ G N
Sbjct: 2435 -LSGNDRTSFIMDSKSGVITLSNHRKQRMEPMYSLNVSVSD-GLFTSTAQVHIQIL-GAN 2491

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              SPVF Q+ Y   V E A+  + V  +  +   SG
Sbjct: 2492 LYSPVFSQSVYVAEVRENAAPGTKVLHVKATDGDSG 2527



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
            ++++ A D D G + EI YSI     +GL +F ID  +GVI T   L     + Y +TV 
Sbjct: 1063 VLQVVARDEDSGRDGEIQYSIR--DGSGLGRFSIDEETGVIYTADVLDRETTKSYWLTVY 1120

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD G       +EV + V   N  +P+  +  Y  +V E +  + +V  I
Sbjct: 1121 ATDHGVVPLYATIEVYIEVEDVNDNAPLTSEPIYYPSVMENSPKDVSVIQI 1171



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+      +   V A +         + + + + D+NDNAP    P+  P 
Sbjct: 1100 VIYTADVLDRETTK--SYWLTVYATDHGVVPLYATIEVYIEVEDVNDNAPLTSEPIYYPS 1157

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++ Y I   S    + F I+P++G+I TT + +  
Sbjct: 1158 VMENSPKDVSVIQIQAQDPDSSTNEKLAYRI--TSGNPQNFFVINPKTGLITTTSRKLDR 1215

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVP--GPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  +D GG S +      VV     N   P F +  Y + + E
Sbjct: 1216 EQQAEHFLEVTVSD-GGTSPKQSSVWVVVQVLDENDNKPQFPEKVYQIKLPE 1266



 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 8/100 (8%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++ ++ATD D GV  +I+YSI  +++    +F ID  +G I TT +L    +      I
Sbjct: 2515 KVLHVKATDGDSGVYGQISYSI--INDFAKDRFLID-SNGQILTTERLDRENLLESDIGI 2571

Query: 125  TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
             ++A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2572 FLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2610



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           +T+ L D ND+ P            ++      ++ + A D D G N  ITYSI  +++ 
Sbjct: 459 VTIRLEDANDHTPEFQQTSYSSFVNESVPVGFSVLAVSAVDKDRGENGYITYSIASLNSL 518

Query: 97  GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KSSQTIVEVSVVPGP-NTR 151
               F I+  +GVI T+ +L    + E Y   V+A+D G     ++ V V++  G  N  
Sbjct: 519 ---PFIINQFTGVISTSEELDFESSPESYRFIVRASDWGSPYRHESEVNVTIYIGNVNDN 575

Query: 152 SPVFQQ 157
            P+F++
Sbjct: 576 KPLFEK 581


>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
            receptor 3 [Otolemur garnettii]
          Length = 4378

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+    +   +  +       +++I AT
Sbjct: 1035 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSLYTGLVSEDAPPFTSVLQISAT 1094

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 1095 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1153

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V V   N  +P+F    ++V V E + + S VA IT
Sbjct: 1154 PLRTPVSIQVTVQDVNDNAPIFPAEEFEVRVKENSIVGSVVAQIT 1198



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 492 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 544

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y         +     F IDPRSG+I 
Sbjct: 545 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARSAAAAAFEIDPRSGLIS 604

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 605 TSGRVDREHMENYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 664

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 665 DVRPHTVVLRVTAT 678



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 985  VVVISASDDDVGENARITYFL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 1040

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 1041 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVTSLYTGLVSEDAPPFTSVLQISAT 1094



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 427 ANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSI 486

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  SPVF+Q  
Sbjct: 487 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQ 545

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 546 YRETLRENVEEGYPILQLRAT 566



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 822 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 878

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 879 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 934

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 935 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 991



 Score = 43.5 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1158 PVSIQVTVQDVNDNAPIFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1214

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V + +V   N 
Sbjct: 1215 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHIRLV-DQND 1272

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1273 NSPVLNNFQILFNNYVSNRSD 1293



 Score = 43.1 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 634 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 691

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y + ++A D G    S+ T +    V
Sbjct: 692 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQV 749

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 750 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 781


>gi|354501665|ref|XP_003512910.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Cricetulus
           griseus]
          Length = 3070

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 18/196 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 418 YLVCVARRLDREERD--VYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 475

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 476 EPLPEVALPG----SFVVRVTAQDPDQGTNGQVTYSLAPGTHT--HWFSIDPTSGIITTA 529

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 530 ATLDYELEPQPQLIVLATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 589

Query: 171 NSTVATITVSRLASGC 186
            +    +T +   SG 
Sbjct: 590 GTCFLQVTATDADSGS 605



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2116 HYHLQLLAHDGPHEGHA-----NLTVLVEDVNDNAPTFSQSLYQVMMLEHTPPGSAILSV 2170

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++ G   F +DP +G + TT G +  G++      + ++A
Sbjct: 2171 SATDRDSGANGHIS---YHLASPG-EGFSVDPNNGTLFTTVGAVALGQEGPGVVDVVLEA 2226

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+ ++  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2227 RDHGAPGRVARATVHVQLQ-DQNDYAPSFTLPHYRVAVSEDLPPGSTLLTL 2276



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 12/135 (8%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ DIND AP  P      +  +       ++ ++ATD DLG N ++TY        
Sbjct: 1407 LTVSVVDINDEAPAFPHQEYSVLLRENSPPGTSLLTLKATDPDLGANGQVTY-----GGV 1461

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKS--SQTIVEVSVVPGPNTRS 152
                F +DP +GV+ T   L   EQ  I  TV A D G     +  IV V+V    N  +
Sbjct: 1462 SGESFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHAIVRVTVE-DENDHT 1520

Query: 153  PVFQQNTYDVNVSEG 167
            P F      + V EG
Sbjct: 1521 PTFGNTHLSLEVPEG 1535



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 1911 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 1969

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 1970 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RLVLMATDRGSP 2027

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 2028 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2082



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E   +   +++++A
Sbjct: 1593 FKLQIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPAYSVEVPEDAPSGTLLLQLQA 1651

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +   +Y++       F ++P SG + T   L       Y+ +V A D   
Sbjct: 1652 HDPDDGDNGRV---MYYLGAGTAGAFLLEPTSGELRTATALDREHCASYAFSVNAVDGAA 1708

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1709 AGPLSTTVPITITVRDVNDHAPTF 1732



 Score = 42.4 bits (98), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 17/185 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQ 62
           +LDR+  N   +  Q+ A +           L V L DIND+AP     R   +    + 
Sbjct: 208 DLDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSESLA 265

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L   ++ 
Sbjct: 266 PGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDSHTGLLRLERPLDFEQRR 322

Query: 122 -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTVA 175
            + + VQA D G         V+V V   N   P    +F        VSE A     VA
Sbjct: 323 VHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAPPGQLVA 382

Query: 176 TITVS 180
            I+VS
Sbjct: 383 RISVS 387



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 26/175 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVK 72
            + +  V A +  GT  ++ V +TV + D+ND+ P  P+     +    A  Q     +  
Sbjct: 2444 RHQLVVQAADPAGTHFAL-VPVTVEVLDVNDHGPAFPLN---LLSTSLAENQPPGTLVTT 2499

Query: 73   IEATDNDLGVNAEITYSIYHV--SNTGLHKFRIDPRSGVI--------ETTGKLIAGEQY 122
            + A D D G    + YS+        G   F ++  +G +        E TG       +
Sbjct: 2500 LHAIDGDAGTFGRLQYSLLEAMPGPEGREAFSLNSSTGELRARVPFDYEHTGS------F 2553

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V A D G  S+   V V +V G +   PVF   T+   V EGA    ++  +
Sbjct: 2554 RLLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPTFHFQVPEGAQRGHSLGHV 2607



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNA 84
            ++ GTA     ++ V++ + ND++PRL   P     A        + ++ ATD D G N 
Sbjct: 1080 QQTGTA-----TVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNG 1134

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIV 140
             +TYS+  +S      FRI P++G + T   L    Q  + + V   D+G   +S+   V
Sbjct: 1135 RLTYSLRQLSEDS-KAFRIHPQTGEVTTLQSLDREHQSSFQLLVHVQDSGSPPRSTTGTV 1193

Query: 141  EVSVVPGPNTRSPVFQQ 157
             ++V+   N  SP F Q
Sbjct: 1194 HIAVL-DLNDNSPTFLQ 1209



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++     S  V +TV + D+NDN       PP+  QA              
Sbjct: 2339 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDN-------PPVFTQASYRVTVPEDMPVGA 2391

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++ +EA+D D G +  + +++      GL  F +D  SG +     L    Q  + + V
Sbjct: 2392 ELLHVEASDADPGPHGLVRFTLSSGDPLGL--FELDENSGALRLAHPLDCETQARHQLVV 2449

Query: 127  QATDTGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   VEV  V   N   P F  N    +++E     + V T+
Sbjct: 2450 QAADPAGTHFALVPVTVEVLDV---NDHGPAFPLNLLSTSLAENQPPGTLVTTL 2500



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++P    Q       I  + A D D G N+++T+S+    
Sbjct: 878  VLLDDVNDNSPAFPAPEDTVLLP----QNTSPGTPIYTLRALDPDSGANSQVTFSLL--- 930

Query: 95   NTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G I          G  Y + V+A D G     +   + VV    G +
Sbjct: 931  AGGDGMFTVDPITGHIRLMGPLGPPGGPAYELEVEARDGGSPPRTSHFRLRVVIQDLGIH 990

Query: 150  TRSPVFQQNTYDVNV 164
              +P F   TY V++
Sbjct: 991  GLAPRFDSPTYRVDL 1005



 Score = 38.9 bits (89), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +QI
Sbjct: 102 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQI 148

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV--IETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++ R G         ++
Sbjct: 149 PEHTALGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPNGAPVPELVV 205

Query: 118 AGE-------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            G+        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 206 VGDLDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 264

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 265 APGSPVLQVFASDADAGA 282


>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
          Length = 4557

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 14/152 (9%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITY 88
            T A V V++T    D+NDN+P    +    +   +  + + I+KI A D D+G N +I Y
Sbjct: 3011 TQAMVEVTVT----DVNDNSPVCDQVAYTALFPEDIPSNKIILKISAKDADIGPNGDIRY 3066

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            S+Y    +G +KF +DP SG ++T   L+  E+   Y++  +ATD GG+  Q+ + + ++
Sbjct: 3067 SLY---GSGNNKFFLDPESGELKTLA-LLDREKIPVYNLIARATDGGGRFCQSDIRL-IL 3121

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F  + Y+  + E  +  + +  +
Sbjct: 3122 EDVNDNPPIFSSDHYNTCIYENTATKALLTRV 3153



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRESPMEGDI--SIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D GVN+ ITYS+Y  ++  +     IDP +G + T      +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGVNSRITYSLYSEASVSVADLLEIDPDNGWMVTKSNFHQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P P    P F Q  Y   + E   I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PEILFPSFTQPQYSFAIPEDTVIGSTVD 2728

Query: 176  TITV 179
            ++ +
Sbjct: 2729 SLRI 2732



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 VWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
              ++ G  KF IDP++G++ +  +  AG    +T++A D G   KSS   + +  +  P 
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPVPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 11/178 (6%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAG 64
            E LD +  +  K    ++ R+++         + VN+ D ND++P    P+      ++ 
Sbjct: 1522 ERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFESA 1579

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQY 122
                 ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I  + +  +    Q+
Sbjct: 1580 ALGSAVLQVTALDKDRGENAELLYTI-EAGNTG-NTFKIEPILGIITVSKEPDMTTMGQF 1637

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             ++++ TD G    S+  IV +SV    N+  P F Q  Y   V+E   I ++V  I+
Sbjct: 1638 VLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTQKEYQAEVNENVDIGTSVILIS 1694



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 11/169 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            F   V A++    A S   ++ +NL D+NDNAP+    +   +  +       ++ + A 
Sbjct: 3307 FYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVLIAE 3366

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDTG 132
            D D   N +I +SI  VS    ++F +DP  G+++   KL    ++G  YS+ +QATD+G
Sbjct: 3367 DVDSPPNGQIRFSI--VSGDRDNEFAVDPVLGLVKVKKKLDRERVSG--YSLLIQATDSG 3422

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +  + V V++ +   N   PVF    Y   + E   + +++  + V+
Sbjct: 3423 VPAMSSTVTVNIDISDVNDNGPVFTPANYTAVIQENKPVGTSILQLMVT 3471



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S P  + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGNPQLTAES-PAEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +I+K++ATD D  V AE+TYS+       L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEILKVQATDPDSDVPAELTYSLME---GNLDYFLIDSNSGVLSIKNSSLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D  GK   T +   +V         F Q+ Y  ++SE ++  + VA +
Sbjct: 1952 MLIVRVSD--GKFYGTAMVTIMVKEAMDSGLHFTQSFYFASISENSTNITKVAIV 2004



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VIYTADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDISVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFVINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ V V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY++        
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTALDRDKGANGEVTYTL----QEDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y + + A D G  +    VE+ +    N   PVF
Sbjct: 2128 GHFEINPESGSVFLKEAFNSDLSNIEYGVIILAKDGGKPALSASVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +++ + +I
Sbjct: 2187 DKPFYTTSVNEDIEMHTPILSI 2208



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 17/156 (10%)

Query: 32   AASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            A S   ++T+ + DINDN P       L  +P       E    ++ + AT  D+G NAE
Sbjct: 3215 ALSSLATVTITVLDINDNPPVFERRDYLVTVPEDTTPGTE----VLAVFATSKDIGTNAE 3270

Query: 86   ITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLIAGEQYSITVQATDTGGKSSQTIVEV 142
            ITY I   +  G  KF+I+ ++G   VIE     +  + Y + V+A D G  +   +  V
Sbjct: 3271 ITYLIRSGNERG--KFKINLKTGGISVIEALDYEMCKDFY-LVVEAKDGGTPALSAVATV 3327

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ +   N  +P F Q  Y   +SE ASI  +V  +
Sbjct: 3328 NINLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVL 3363



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 11/146 (7%)

Query: 39  LTVNLNDINDNAP-RLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           LT+N+ D NDN P  L     + I ++     +I+++EA D DLG N E+ YS+     T
Sbjct: 817 LTINVEDANDNRPIFLQESYSVNILESSSIGTEIIQVEARDKDLGPNGEVMYSVL----T 872

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT--GGKSSQTIVEVSV-VPGPNTR 151
              +F I+  +G++    +L   +   YS+ ++A D    G+   ++V + V +   N  
Sbjct: 873 DAQQFSINSSTGIVYVADQLDRESKANYSLKIEARDKSESGQQQFSVVTLKVFLDDVNDC 932

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
           SP F   +Y V V E   + + +A +
Sbjct: 933 SPTFIPTSYSVKVLEDLPVGTVIAWL 958



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P         V + + + D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDIEIKVLDLNDNKPFFDASSYEAIIMEGMPVG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLIAGEQ--YS 123
             ++++++A D D G N ++TY+++  SN    +  F ID  +G I T   L       ++
Sbjct: 2831 TRLIQVKAIDKDWGANGQVTYALHSDSNAEKVMEVFSIDTNTGWISTLKDLDHERDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS T+V V+V    N  +PVF    Y   V E       VA ++
Sbjct: 2891 FSVLASDLGEAFSLSSTTLVSVTVT-DINDNAPVFGHEVYREYVKESDPPGEVVAVLS 2947



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 21   FQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            F++  R     T A   V++ + +ND+NDN P    P       +A      ++++ A+D
Sbjct: 2254 FKLTVRASDALTGARAEVTVDLLVNDVNDNPPIFDQPTYNATLSEASLIGTPVLQVVASD 2313

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG- 133
             D   N  + Y I   +      F ID  SG+I  T +++  E   Q ++ V+ATD G  
Sbjct: 2314 ADSENNKIVQYQIVQDTYNSTDYFHIDSTSGLI-LTARMLDHESVQQSTLKVRATDNGFP 2372

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS+ +V + V    N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2373 PMSSEVLVNIYVT-DMNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IAR   G        + + L D+NDN P            +    +  + +++ATD 
Sbjct: 3099 YNLIARATDGGGRFCQSDIRLILEDVNDNPPIFSSDHYNTCIYENTATKALLTRVQATDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
            DLG+N ++ YS+   +++    F +D  SG+I     L    Q  Y+I+V+A+D      
Sbjct: 3159 DLGINRKVVYSL---ADSAGGYFSVDSSSGIIILEQPLDRELQSSYNISVKASDQSILKA 3215

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             SS   V ++V+   N   PVF++  Y V V E  +  + V  +
Sbjct: 3216 LSSLATVTITVL-DINDNPPVFERRDYLVTVPEDTTPGTEVLAV 3258



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P  ++   E      +I+++EATD D     +++Y+I+  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PSYEVTISEDVLPDTEILQVEATDRD--EKHKLSYTIHSSIDSVSMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRID  +GV+    +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDASTGVLYIAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTS 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQ--GTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKSESGQQQFSVVTLKVFLDDVNDCSPTFIPTSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTG 132
              +Q  Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  SGVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVIYTADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + +   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIY 1153



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  I ++ ATD D+G N E     Y+     +  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSIAQVTATDADIGSNGE----FYYYFKNKVDLFS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + V A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEVLAVDRGMK 239



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  +   F I+P SGVI T  K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGNIEGIFTINPYSGVI-TNQKALDYERISSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               N   P+F  + Y  ++SE A INS V ++
Sbjct: 1761 -DENDNPPIFLFSQYSGSLSEVAPINSIVRSL 1791



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 25/150 (16%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVK 72
           +++    K+G    +   +T+ L D ND+ P        Q  + EA           ++ 
Sbjct: 443 YELAVSNKEG---DLKAQVTIGLEDANDHTPEF------QQSSYEAFVNESVPMGTSVLS 493

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQAT 129
           + A+D D G N  ITYSI   ++     F I+  +GVI TT +L    + E Y   V+A+
Sbjct: 494 VSASDKDKGENGYITYSI---ASLNALPFSINQFTGVIRTTEELDFESSPENYRFIVRAS 550

Query: 130 DTGG-KSSQTIVEVSVVPGP-NTRSPVFQQ 157
           D G     ++ V V++  G  N  SP+F++
Sbjct: 551 DWGSPYRHESEVNVTIRIGNVNDNSPLFEK 580



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITV 126
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +   EQ   Y + +
Sbjct: 745 ILKIKAFDADSGFNGKVVFTISD-GNTD-SCFNIDMETGQLKVLMPM-DREQTDLYLLNI 801

Query: 127 QATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              D G   KSS  ++ ++V    + R P+F Q +Y VN+ E +SI + +  +
Sbjct: 802 TIYDLGKPQKSSWRLLTINVEDANDNR-PIFLQESYSVNILESSSIGTEIIQV 853



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  I  E Y + V   +   K+  TI     +   N  +P FQQ+
Sbjct: 420 FKINPRSGLIVTAQPLDVIKKEVYELAVSNKEGDLKAQVTIG----LEDANDHTPEFQQS 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
           +Y+  V+E   + ++V +++ S    G
Sbjct: 476 SYEAFVNESVPMGTSVLSVSASDKDKG 502



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 34   SVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIY 91
            S  V + + + D+NDN P    +I    +     R   V  ++A+D D      + YSI 
Sbjct: 2375 SSEVLVNIYVTDMNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYSI- 2433

Query: 92   HVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
             +S      F +D +SG+I  +   K      YS+ V  +D G  +S   V + ++ G N
Sbjct: 2434 -LSGNDRTSFLMDSKSGIITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRIL-GAN 2490

Query: 150  TRSPVFQQNTYDVNVSEGAS 169
              SP F Q+TY   V E A+
Sbjct: 2491 LYSPAFSQSTYVAEVRENAA 2510


>gi|307196180|gb|EFN77837.1| Cadherin-89D [Harpegnathos saltator]
          Length = 1596

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 53/225 (23%)

Query: 1   YLVVSKEN-LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIP 57
           Y V + +N LDR+  +   + FQV A +  G  +   + +TV   D+NDNAP+    ++ 
Sbjct: 515 YFVATDDNILDRE--SRANYEFQVTATDTGGLTSESTLRITVL--DVNDNAPKFIRMVVL 570

Query: 58  PIQ-------------------IQAGEARRQ--------------IVKIEATDNDLGVNA 84
           P Q                   ++ G  RR               I+++ A D D G NA
Sbjct: 571 PDQGVRVSQEPDVKDEATEDGSVETGGGRRSPLLLVPENTTIGAPIIRLLADDKDEGANA 630

Query: 85  EITYSIYHVSNTG------------LHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            ITYS+ + + +G               F +DPR+  I     L   +   + V A D G
Sbjct: 631 AITYSLGNETTSGSGVRSRRYDASSRRYFHLDPRTAEISVARSLPPEKDVRLFVLAKDPG 690

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           G S    V + V    N  +PVF ++ Y  +V+EG   + T+  +
Sbjct: 691 GLSDNITVRIHVT-DVNDHAPVFDKSWYTFDVAEGVYNDWTIGAV 734



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 10/100 (10%)

Query: 41   VNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V + D+NDNAPR      P++  I   A     ++VK+EA D D GVN EI Y I  +  
Sbjct: 1080 VRVKDVNDNAPRFKFKGRPILAAIPTSAHYGY-EVVKVEAEDPDEGVNGEIRYQI--LGR 1136

Query: 96   TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGG 133
                +F IDP SG + +       AG  +   V+ATD  G
Sbjct: 1137 EDAPRFAIDPLSGQVRSVASFGRDAGRVFGFDVKATDRQG 1176



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 41/210 (19%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------------RLPMIPPIQIQAGEA 66
            R  V+AR+    + S  V + +N+ D+NDNAP             RLP+     ++    
Sbjct: 794  RLLVVARDHGSPSLSSSVEIEINVLDVNDNAPMFHGYDELEEGATRLPVYRVSVLENSPI 853

Query: 67   RRQIVKIEATDNDLGVNAE--ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
              Q+ K+ A D+D   N    I + + +        F +D + GVI T  KL       +
Sbjct: 854  GTQVAKVYANDSDFAGNGNGLILFDLSYQDRAEKQYFAVDSKEGVITTIAKLDYETKRSH 913

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNT------------------------RSPVFQQN 158
             + V A+D G   S T   V +V   N                         + P FQ  
Sbjct: 914  RLIVTASDLGSPVSLTSSAVVLVTVLNVDDDDDDDDDDDGNGGRQDADNEVHKMPTFQHR 973

Query: 159  TYDVNVSEGASINSTVATITVSRLASGCAI 188
             Y+V V E  ++   VA + ++    G  I
Sbjct: 974  YYEVEVDENTTVPLLVAQLDLAEDYHGDHI 1003



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 18/172 (10%)

Query: 11  RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQ 69
           R  P     R  V+A++  G + ++ V   +++ D+ND+AP          +  G     
Sbjct: 672 RSLPPEKDVRLFVLAKDPGGLSDNITVR--IHVTDVNDHAPVFDKSWYTFDVAEGVYNDW 729

Query: 70  IV-KIEATDNDLGVNAEITYS-IYHVSNTGL-------HKFRIDPRSGVIETTGKLIAGE 120
            +  + A D D G NAE+TY  I    ++GL         F +DP  GVI+ +G L    
Sbjct: 730 TIGAVRALDADYGANAELTYELITSHEDSGLVGLNNASRSFNVDPYEGVIQVSGTLDRER 789

Query: 121 --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
              + + V A D G  S  + VE+ + V   N  +P+F  + YD  + EGA+
Sbjct: 790 ITTHRLLVVARDHGSPSLSSSVEIEINVLDVNDNAPMF--HGYD-ELEEGAT 838


>gi|169234947|ref|NP_033999.1| cadherin-9 precursor [Mus musculus]
          Length = 788

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 20/188 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           + + + LDR+  +    R + I R K G          + ++DINDN P+         +
Sbjct: 109 IHAAKRLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 167

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G +  Q+   +A D + G +A++ YSI      G   F +DP SG+I+T    
Sbjct: 168 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 222

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           ++    EQY + +QA D GG+    S  T V +++    N   P F Q+TY  N  E A 
Sbjct: 223 MSRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSLESAP 281

Query: 170 INSTVATI 177
           + + +  I
Sbjct: 282 LGTHLGRI 289



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 31/185 (16%)

Query: 18  KFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQI 70
           K ++QV+  A++  G    +  + TVN  L D+N+N PR P     Q  + E+      +
Sbjct: 228 KEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSLESAPLGTHL 286

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSI 124
            +I+A D D+G NAE+ YSI      G   F +    D + G+I     L   ++  Y++
Sbjct: 287 GRIKANDPDMGENAELEYSI--AEGEGSDMFDVITDKDTQEGIITVKQNLDFEKKMLYTL 344

Query: 125 TVQATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            V A++T         G      +V++SV  V  P    PVF + +Y + V E     S 
Sbjct: 345 RVDASNTHPDPRFLHLGPFKDSAMVKISVEDVDEP----PVFSKLSYLMEVDEDVKEGSI 400

Query: 174 VATIT 178
           +  +T
Sbjct: 401 IGQVT 405


>gi|119370308|sp|P70407.2|CADH9_MOUSE RecName: Full=Cadherin-9; AltName: Full=T1-cadherin; Flags:
           Precursor
          Length = 786

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 20/188 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           + + + LDR+  +    R + I R K G          + ++DINDN P+         +
Sbjct: 109 IHAAKRLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 167

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G +  Q+   +A D + G +A++ YSI      G   F +DP SG+I+T    
Sbjct: 168 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 222

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           ++    EQY + +QA D GG+    S  T V +++    N   P F Q+TY  N  E A 
Sbjct: 223 MSRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSLESAP 281

Query: 170 INSTVATI 177
           + + +  I
Sbjct: 282 LGTHLGRI 289



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 31/185 (16%)

Query: 18  KFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQI 70
           K ++QV+  A++  G    +  + TVN  L D+N+N PR P     Q  + E+      +
Sbjct: 228 KEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSLESAPLGTHL 286

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSI 124
            +I+A D D+G NAE+ YSI      G   F +    D + G+I     L   ++  Y++
Sbjct: 287 GRIKANDPDMGENAELEYSI--AEGEGSDMFDVITDKDTQEGIITVKQNLDFEKKMLYTL 344

Query: 125 TVQATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINST 173
            V A++T         G      +V++SV  V  P    PVF + +Y + V E     S 
Sbjct: 345 RVDASNTHPDPRFLHLGPFKDSAMVKISVEDVDEP----PVFSKLSYLMEVDEDVKEGSI 400

Query: 174 VATIT 178
           +  +T
Sbjct: 401 IGQVT 405


>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
          Length = 3261

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 13/198 (6%)

Query: 1   YLVVSKENLDRD-PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIP 57
           Y++VS   LDR+  PN       V A ++         +  + + D NDNAP+    M  
Sbjct: 378 YMIVSLP-LDREVKPN---MTLVVTATDQGSPPLHASRAFNLRVTDTNDNAPQFEQTMYY 433

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              ++  +    + ++ A D DLG N+ +TYSI    +T    F+ID R+G+I TT K I
Sbjct: 434 ANVLEVADPGTSVFQLSALDRDLGNNSVVTYSILESPDTHSDWFQIDGRTGLI-TTRKHI 492

Query: 118 AGEQY---SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
             E      IT+ A+D G  S      V V +   N   P+F Q+ Y+V+V E  ++   
Sbjct: 493 DCETDPVPQITILASDAGRPSLTGTATVRVTIRDVNDNEPIFDQSFYNVSVREDEAVGHC 552

Query: 174 VATITVSRLASGC-AIMN 190
           V  ++ +    G  AI+N
Sbjct: 553 VLKVSATDPDCGVNAIVN 570



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 14/155 (9%)

Query: 39  LTVNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           + + + D+NDNAP    ++  I + +  E    I    A D+D G N  + Y +   +  
Sbjct: 830 VNITIGDVNDNAPEFDTVVVKISVAENAELGSPIYAAHAHDDDSGDNGAVIYQLL-TNPD 888

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTI-VEVSVVPGPNT 150
           GL  F+IDPR G I  T KL     ++Y++ + A D G    +S+ T+ +EV  V   N 
Sbjct: 889 GL--FKIDPRQGFIMLTRKLDFETTQKYALVIGAQDKGSPPLRSNLTLNIEVQDV---ND 943

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P F++N Y VNV+E  ++NS    +    L +G
Sbjct: 944 NPPTFEKNEYQVNVAESLAVNSQFLQVNAIDLDTG 978



 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 22/182 (12%)

Query: 17   GKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
            G + F+V A +  +  A S    + + + D+NDN P     P     P   Q  +   Q+
Sbjct: 1860 GSYTFEVRATDGGRYDARSEKAQIHITITDVNDNKPVFVKYPFAADVPAFTQPNQ---QL 1916

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            ++I A D D G   E+ YS+  ++     KFRI P +GV+  T  L   +G  + + V A
Sbjct: 1917 LQIVAEDKDEGPGGEVVYSL--INQPSNSKFRIHPSTGVVTATNSLTMESGRLFHLEVLA 1974

Query: 129  TDTGGK--SSQTIVEVSVVPGPNTRSPV-------FQQNTYDVNVSEGASINSTVATITV 179
            TD G    SS  ++E+ V  G    S V       FQ  TY V + E A +   V  ++ 
Sbjct: 1975 TDKGSPSLSSTGLIEIRVGMGEAGSSDVPSQVALRFQNATYHVQLGENAPVGKDVIQVSA 2034

Query: 180  SR 181
             R
Sbjct: 2035 VR 2036



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 12/142 (8%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ V + D+NDN P        + ++  EA    ++K+ ATD D GVNA + Y++     
Sbjct: 519 TVRVTIRDVNDNEPIFDQSFYNVSVREDEAVGHCVLKVSATDPDCGVNAIVNYTM----G 574

Query: 96  TGLHKFR---IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            G  K+R   ++P SG I  +  L   ++  Y   + ATD GG S+  +V++ VV   + 
Sbjct: 575 DGFGKYREFEVNPSSGEICISAALDHEKRNIYEFPILATDRGGLSTTAMVKIQVVDVNDN 634

Query: 151 RSPVFQQNTYDVNVSEGASINS 172
           R P F    Y+V++ E  ++NS
Sbjct: 635 R-PTFYPREYNVSLRERETVNS 655



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-----I 73
           + F ++A ++ G + +  V + V   D+NDN P      P +       R+ V      +
Sbjct: 606 YEFPILATDRGGLSTTAMVKIQVV--DVNDNRP---TFYPREYNVSLRERETVNSPVVVV 660

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-AGEQYSITVQATDTG 132
            ATD D G    + Y+I   +  GL  FR++  SG +  T  L  A   + + + ATD G
Sbjct: 661 VATDKDAGKYGTVRYAIVAGNEEGL--FRVEMSSGEVFLTQPLTRARLAHRLNISATDGG 718

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           G  S    EV V V   N + P+F+ N Y  +V E A  NS + T++ S
Sbjct: 719 GLRSAHDAEVLVTVIDSNHQPPIFENNRYLFSVREDAQRNSVIGTVSAS 767



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 8/175 (4%)

Query: 17   GKFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEA 75
            G+ RF V A +   T   S   ++ V + D NDN P  P+   ++  A  A    V   A
Sbjct: 2602 GEHRFIVRASDGHSTQPLSAIATIAVKVEDENDNGPAFPVGSYLEFVAENAPAGTVVFTA 2661

Query: 76   TDNDL--GVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDT 131
              ND+  G   ++ YSI      G   F IDP +G I  ++     A  +Y +++QA+D 
Sbjct: 2662 HANDMDRGPYGKLKYSI--AGGEGKDHFNIDPTTGTIVTQSVFDYEAKNRYYLSIQASDV 2719

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            GG+++   V++  V   +  +P F +++Y  +V   A +   +  +  +    G 
Sbjct: 2720 GGQTASVNVQID-VESRDEFAPEFTESSYRFSVPSDADVGYAIGKVLATDRDKGT 2773



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 9/190 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + +K  LDR+         Q+  +++     S    + V + D+NDN P +       + 
Sbjct: 1108 IFTKGPLDREAK--AVHELQIEVKDQGNPPRSAKAIVRVMVTDVNDNTPVIVEPEETVLS 1165

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIA 118
              E   A  ++V+I A D D G NA ITYS     +T GL  F ID  +G I T   L  
Sbjct: 1166 VREELPAGTEVVRIRAVDTDEGNNASITYSFVIGDDTDGLEAFTIDESTGTIRTKVTLDH 1225

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V   D G    +T+ ++ + V   N   P F  +++   V EG  I   + 
Sbjct: 1226 EERAFYRLAVSVKDHGRPPKETVRQLQIEVLDLNDNRPTFSTSSFAFKVVEGVPIGQEIG 1285

Query: 176  TITVSRLASG 185
            T+      +G
Sbjct: 1286 TVIAEDREAG 1295



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 12/184 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
            LDR+  N  ++   V A +    A +    + +++ DINDN PR   P+      +   A
Sbjct: 1541 LDRESQN--RYALNVTATDHGRPARASWQLVHIHVEDINDNPPRFVRPLYEAAVAENSPA 1598

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
               +VK+ ATD D+G N  +TY+I      G+  F +DP +G + TTG L    +  Y +
Sbjct: 1599 GTFVVKVSATDKDVGTNGNLTYAIPEGIADGM--FSVDPTTGAVTTTGPLDRERKSSYIV 1656

Query: 125  TVQATDTGGKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            T+   D G   +Q      V  V   N  +P F ++ Y + V E + + S + T+  +  
Sbjct: 1657 TIYVRD-GSFPAQYDATSVVVNVLDVNDHAPQFGESCYPLRVPENSDL-SVIHTVVATDA 1714

Query: 183  ASGC 186
             SG 
Sbjct: 1715 DSGV 1718



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 16/177 (9%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
            F  +V+A ++   A +    + ++++D+NDN P        +++  EA+     ++++ A
Sbjct: 2499 FNLKVLAMDRGSPARNSTADVVIHVDDVNDNPPVFNQTL-YEVKVSEAQAIGTALLRVAA 2557

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            TD D   NA ++Y I   ++ G   F +DP +GVI     L   ++GE   I V+A+D  
Sbjct: 2558 TDRDHDENARLSYDITSGNDKGC--FEVDPSTGVISLKKPLDFEMSGEHRFI-VRASD-- 2612

Query: 133  GKSSQTIVEVSV----VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G S+Q +  ++     V   N   P F   +Y   V+E A   + V T   + +  G
Sbjct: 2613 GHSTQPLSAIATIAVKVEDENDNGPAFPVGSYLEFVAENAPAGTVVFTAHANDMDRG 2669



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 29/171 (16%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            YL+++ +  DR  P+P           +QG       ++TV+++D ND+ PR        
Sbjct: 1758 YLIIAAQ--DRGVPSP-----------RQGFC-----NITVSVDDENDSDPRFTQNRYTA 1799

Query: 61   IQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
              A   +    ++ ++ATD D G NA+ITYS+   SN     F+ID  +GV+ TTG    
Sbjct: 1800 TLAENVQPDTIVMTVQATDADRGHNAKITYSL---SNETQWLFKIDNETGVLTTTGHFDR 1856

Query: 119  GEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              +  Y+  V+ATD G    +S +  + +++    N   PVF +  +  +V
Sbjct: 1857 ERRGSYTFEVRATDGGRYDARSEKAQIHITIT-DVNDNKPVFVKYPFAADV 1906



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 17/153 (11%)

Query: 38   SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            S+TVN+ D NDNAP   +      +P +     E    ++ I ATD D G NA + YS+ 
Sbjct: 2307 SITVNVLDENDNAPVFSVQNYRASLPELT----EPGYAVLSINATDADKGENARVRYSL- 2361

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPG 147
             +S T    F I   +GVI T   L    +     + V+A D G  S  ++V V + +  
Sbjct: 2362 AISPT--DAFYISEETGVIYTNQTLTFNPRQPVLQLVVKAQDRGRPSLSSVVAVRIQIAD 2419

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             N  +P F Q+ Y  ++SE A+  + V  ++ +
Sbjct: 2420 VNNNAPKFSQDVYTAHISEDATRGTIVLHVSAA 2452



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 15/170 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KIEA 75
              R  V+A+ +  +      ++ V+L D NDNAPR         +  G  +   V ++ A
Sbjct: 2081 HLRLIVVAQAEGASPLYGYATVWVDLLDQNDNAPRFTQDSYTSAVWEGNNKGTFVMQVSA 2140

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK--FRID-PRSGVIETTGKLIAG--EQYSITVQATD 130
            TD D+G NA I   IYH+ + G H   F I+ P SG+++T   L     + Y +T+ ATD
Sbjct: 2141 TDGDMGANANI---IYHIVD-GNHDNAFVIEPPFSGIVKTNIVLDREIRDFYRLTIIATD 2196

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G    +    + +++V   N   P F  ++  V+VSEG+ + + + TIT
Sbjct: 2197 EGSPQLTGTCTLRINIV-DVNDNQPTFPPHSV-VSVSEGSEVGTVITTIT 2244



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 9/169 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIE 74
            K+   + A++K        ++L + + D+NDN P        Q+   E+     Q +++ 
Sbjct: 913  KYALVIGAQDKGSPPLRSNLTLNIEVQDVNDNPPTFEK-NEYQVNVAESLAVNSQFLQVN 971

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A D D G NA +TY +   +   +  F I P SG +     L     ++Y++TV ATD G
Sbjct: 972  AIDLDTGNNARLTYRVKEEALADV--FGIFPNSGSLYLKKSLDREMRDRYTLTVVATDNG 1029

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                     V+V V   N   PVF ++ Y   + E     + V  ++ +
Sbjct: 1030 LPPGSAAATVNVFVNDANDNDPVFTRDVYQFTIEENLEKGALVGVVSAT 1078



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 6/150 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
            +R  +IA ++     +   +L +N+ D+NDN P  P    + +  G     ++    T N
Sbjct: 2188 YRLTIIATDEGSPQLTGTCTLRINIVDVNDNQPTFPPHSVVSVSEGSEVGTVITT-ITAN 2246

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSS 136
            D+  N  +TY      N     F ID  SG I     L     +QY++ VQA+D     +
Sbjct: 2247 DVDTNPTLTYDFADGGNPD-RMFSIDRFSGKITLAQPLDHERQQQYTLRVQASDM-AHIT 2304

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +T + V+V+   N  +PVF    Y  ++ E
Sbjct: 2305 ETSITVNVL-DENDNAPVFSVQNYRASLPE 2333



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVS 94
           +++ + + D+NDN P           A  A     ++++ ATD D G N  ITYSI    
Sbjct: 194 MTVNITIQDVNDNQPIFNQSRYFASVAENATIGTSVLQVFATDTDAGDNGRITYSINRRQ 253

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
           +     F IDP +GVI     L     E + + V A+D+G ++ +T   VS+ V   N  
Sbjct: 254 SDRDSVFVIDPLTGVISVNRPLDFETKEVHELVVVASDSGVQALETTAFVSIRVTDVNDN 313

Query: 152 SP----VFQQNTYDVNVSEGASINSTVATITV 179
            P    +F  +     +SE A     VA I+V
Sbjct: 314 QPTINLIFLSDDATPKISEDAQPGEFVARISV 345



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG-KL 116
            P+++        I  + ATD D GVN EITYSI    N G +KF ID  +G + +     
Sbjct: 1694 PLRVPENSDLSVIHTVVATDADSGVNGEITYSITG-GNVG-NKFSIDLHTGQLSSRPLDR 1751

Query: 117  IAGEQYSITVQATDTGGKS-SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
               ++Y + + A D G  S  Q    ++V V   N   P F QN Y   ++E    ++ V
Sbjct: 1752 ELKDRYYLIIAAQDRGVPSPRQGFCNITVSVDDENDSDPRFTQNRYTATLAENVQPDTIV 1811

Query: 175  ATI 177
             T+
Sbjct: 1812 MTV 1814



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 12/145 (8%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG 64
            K++LDR+  +  ++   V+A +      S   ++ V +ND NDN P     +    I+  
Sbjct: 1008 KKSLDREMRD--RYTLTVVATDNGLPPGSAAATVNVFVNDANDNDPVFTRDVYQFTIEEN 1065

Query: 65   EARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
              +  +V +  ATD DL  NA + YS+  V+ +    F+++  +G I T G L   A   
Sbjct: 1066 LEKGALVGVVSATDKDLDANAALRYSLLPVNGS----FQLNSLTGEIFTKGPLDREAKAV 1121

Query: 122  YSITVQATDTGG--KSSQTIVEVSV 144
            + + ++  D G   +S++ IV V V
Sbjct: 1122 HELQIEVKDQGNPPRSAKAIVRVMV 1146



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            ++ + + L  +P  P   +  V A+++   + S  V++ + + D+N+NAP+    +    
Sbjct: 2377 VIYTNQTLTFNPRQP-VLQLVVKAQDRGRPSLSSVVAVRIQIADVNNNAPKFSQDVYTAH 2435

Query: 61   IQAGEARRQIV-KIEATDND-LGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI 117
            I     R  IV  + A D+D    N  I YSI    N  ++  F+I   +G I    K +
Sbjct: 2436 ISEDATRGTIVLHVSAADSDETRDNHNIDYSI---ENGNINSTFQITSDTGEILLV-KTV 2491

Query: 118  AGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              E+   +++ V A D G  +  +  +V + V   N   PVF Q  Y+V VSE  +I + 
Sbjct: 2492 DREEISVFNLKVLAMDRGSPARNSTADVVIHVDDVNDNPPVFNQTLYEVKVSEAQAIGTA 2551

Query: 174  VATITVS 180
            +  +  +
Sbjct: 2552 LLRVAAT 2558


>gi|22090634|dbj|BAC06837.1| Pf1-cadherin [Ptychodera flava]
          Length = 1959

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 90/187 (48%), Gaps = 16/187 (8%)

Query: 2   LVVSKENLDRDPPNPGKFR-FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ S+++LDR+  N G+ R F V A    GT +   V + + + D+NDNAP+ P  P I 
Sbjct: 520 IISSRKHLDRED-NKGQVREFTVTASNSAGTTS---VEVLIKIKDVNDNAPQFPYPPYIG 575

Query: 61  I--QAGEARRQIVKIEATDND---LGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIET- 112
              + G     ++ I+A D D    G NA + YSI     ++ G   F ID  S VI T 
Sbjct: 576 SFPENGAPGVTVMTIQAEDLDDPNEGGNALVRYSILRNAQNSVGQAIFAIDSESAVITTQ 635

Query: 113 TGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            G L   E   Y I V+A D GG  + T+     V   N   P F Q    V +SE   +
Sbjct: 636 VGNLDREEIPSYDIVVKAVD-GGAHTGTVTATIYVSDENDNPPEFPQAKSFVEISENVPV 694

Query: 171 NSTVATI 177
           +S+V  +
Sbjct: 695 DSSVFKV 701



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + + D+NDNAP   P    + + +   A   +  + A D D G N ++ Y     ++T
Sbjct: 207 LLITVEDVNDNAPEFDPETCEVTVPEISPADAIVAYVHAVDPDAGKNGKVMY----YTDT 262

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
               F + P +G +   G L A E Y++TV A D G  S
Sbjct: 263 NDMTFSVHPDTGGVIIGGPLQAKE-YTLTVFARDRGKPS 300



 Score = 36.2 bits (82), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 12/111 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            VVS E  DR+   P  +   V+  +K G +A+   +LTV + D+NDN P  P    I + 
Sbjct: 967  VVSLEEFDREA-TP-FYYIPVVLSDKHGVSAT--QTLTVTIGDVNDNPPS-PATKTILVY 1021

Query: 63   AGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
            + +    R  I ++ A D D+    +I+Y++     T + +F +D  +G I
Sbjct: 1022 SYKGQIPRSAIGEVYAADEDIVKGDDISYTV----TTPIPQFSVDKDTGQI 1068


>gi|194880380|ref|XP_001974424.1| GG21729 [Drosophila erecta]
 gi|190657611|gb|EDV54824.1| GG21729 [Drosophila erecta]
          Length = 1250

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 43  LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 102

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 103 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 162

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 163 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 221

Query: 174 VATITV 179
           + T+TV
Sbjct: 222 ILTVTV 227


>gi|335294261|ref|XP_003357178.1| PREDICTED: protocadherin-16 [Sus scrofa]
          Length = 3300

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 420 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPTFDRQLYRP 477

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++   H F IDP SG+I T 
Sbjct: 478 EPLPEVALPG----SFVVRVTAQDPDQGTNGQVTYSLAPGAHA--HWFSIDPSSGIITTA 531

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 532 ASLDYELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 591

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 592 GTCFLQVTATDADSG 606



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            ++  Q++A +   QG A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2342 RYHLQLLAHDGPHQGHA-----NLTVLVEDVNDNAPTFSQSLYQAMLLEHAPPGSAILSV 2396

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++     F +DP +G + T  G    G +      + ++A
Sbjct: 2397 SATDRDSGANGHIS---YHLASPA-EGFSVDPNNGTLFTAAGTAAWGHEGPGVVDVVLEA 2452

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+ ++  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2453 RDHGTPGRVARATVHVQLQ-DQNDHAPSFTLPHYRVAVSEDLPPGSTLLTL 2502



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 22/197 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            V S E LD +       R +++ + + G A +  V LT+ L D NDNAPR   P      
Sbjct: 2124 VRSAEGLDFE----ASPRLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLRPHYVAFL 2178

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---I 117
             ++      ++++EA D D G + +++YS+   S      F +DP +G I TT  L   I
Sbjct: 2179 PESRPLEGPLLQVEADDPDQGPSGQVSYSLA-ASQPARGLFHVDPATGTITTTAILDREI 2237

Query: 118  AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              E   + + ATD G     G ++ T++ V      N   P   Q  +++ VSE A + S
Sbjct: 2238 WAET-RLVLMATDKGSPALVGSATLTVLVVDT----NDNRPTIPQ-PWELRVSEDALLGS 2291

Query: 173  TVATITVSRLASGCAIM 189
             +A +T + + SG A+ 
Sbjct: 2292 EIAQVTGNDVDSGPALW 2308



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P       +PP           I  + A D D G N  +T+++    
Sbjct: 880  VLLDDVNDNSPAFPAPEDTVFLPPGTAPG----TPIYTLRALDPDSGANGRVTFTLL--- 932

Query: 95   NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G I   G L  + G  + + ++A D G     +   + VV    G  
Sbjct: 933  AGGGGAFTVDPTTGHIRLMGPLGPLGGPAHELELEARDGGSPPRTSHFRLRVVVQDLGSR 992

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G S  + V  +
Sbjct: 993  GLAPHFDSPTYRVDLPSGTSPGTRVLQV 1020



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 23/188 (12%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+     ++   V+A +      S    LT+++ D+ND AP        Q +     R
Sbjct: 1605 LDRE--QRAEYLLTVVASDHGSPPRSATQLLTISVADVNDEAPTF-----QQQEYSVLLR 1657

Query: 69   Q-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +       ++ + ATD DLG N  +TY    VS      F +DP +GV+ T   L   EQ
Sbjct: 1658 ENSPPGVSLLTLRATDPDLGANGHVTYG--GVSG---ESFSLDPDTGVLTTLRALDREEQ 1712

Query: 122  YSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              I  TV A D G       V V V V   N  +P F      + V EG     T+AT+ 
Sbjct: 1713 EKINLTVYARDGGSPPLLAHVTVRVAVDDENDHAPAFGSAHLSLEVPEGQDPQ-TLATLR 1771

Query: 179  VSRLASGC 186
             S   +G 
Sbjct: 1772 ASDPDAGA 1779



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ ++ AR+    A S  + +TV + D ND+AP  P  P   ++  E   A   +++++A
Sbjct: 1819 FQLKIEARDGGQPALSATLLVTVTVLDANDHAPTFPE-PAYSVEVPEDAPAGTLLLQLQA 1877

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
             D D G N  +T   Y++       F ++P SG + T   L   +   Y+ TV A D
Sbjct: 1878 HDPDAGANGHVT---YYLGAGAAGAFLLEPSSGELRTATALDREQCPSYAFTVNAVD 1931



 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 8/156 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEAT 76
            K    V AR+         V++ V ++D ND+AP        +++  G+  + +  + A+
Sbjct: 1714 KINLTVYARDGGSPPLLAHVTVRVAVDDENDHAPAFGSAHLSLEVPEGQDPQTLATLRAS 1773

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-- 132
            D D G N ++ Y I      G   F +D  SG   T   L       + + ++A D G  
Sbjct: 1774 DPDAGANGQLQYRILDGDPAG--AFVLDLASGEFGTMRPLDREVEPAFQLKIEARDGGQP 1831

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
              S+  +V V+V+   N  +P F +  Y V V E A
Sbjct: 1832 ALSATLLVTVTVLDA-NDHAPTFPEPAYSVEVPEDA 1866



 Score = 42.4 bits (98), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R    
Sbjct: 205 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHGT 261

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L
Sbjct: 262 VSESLAPGS---PVLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPL 318

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 319 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 378

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 379 PGQLVARISVS 389



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 14/143 (9%)

Query: 47   NDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND++PRL   P     A        + ++ ATD D G N  +TYS+  +S      FRI 
Sbjct: 1097 NDHSPRLSEEPTFLAVAENQLPGTSVGRVFATDRDSGPNGRLTYSLRQLSEDS-KVFRIH 1155

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNT- 159
            P++G + T   L    Q  Y + VQ  D G   +S+   V ++V+   N  SP F Q + 
Sbjct: 1156 PQTGEVTTLQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHITVL-DLNDNSPTFLQASG 1214

Query: 160  -----YDVNVSEGASINSTVATI 177
                   V V +G    + V T+
Sbjct: 1215 AAGGGLPVQVPDGVPPGTLVTTL 1237



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 26/174 (14%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2670 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLS---LLSTSLAENQPPGTLVTTL 2726

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVI--------ETTGKLIAGEQYS 123
             A D D G    + YS+        G   F ++  +G +        E TG       + 
Sbjct: 2727 HAVDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTGS------FQ 2780

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            + V ATD G  S+   V V +V G +   PVF    +   V EGA    ++  +
Sbjct: 2781 LLVGATDAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHV 2833



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P    + Q+
Sbjct: 104 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAVLQV 150

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 151 PEHTALGTRYPLEPARDADAG---RLGTQGYSLSGDGAGETFRLETRPGPDGAPVPELVV 207

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 208 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHGTVSESL 266

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 267 APGSPVLQVYASDADAGA 284



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++     S  V +TV + D+NDN       PP+  +A              
Sbjct: 2565 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDN-------PPVFTRASYRVAVPEDTPVGA 2617

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++++EA+D D G +  I +++      GL  F +D  SG +     L    Q  + + V
Sbjct: 2618 ELLQVEASDADPGPHGLIRFTLSSGDPLGL--FELDESSGDLRLARPLDCETQTRHQLVV 2675

Query: 127  QATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   +EV  V   N   P F  +    +++E     + V T+
Sbjct: 2676 QAADPAGAHFALAPVTIEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2726



 Score = 35.8 bits (81), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 13/172 (7%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI-EATDN 78
            R  ++A +K   A     +LTV + D NDN P +P   P +++  E      +I + T N
Sbjct: 2242 RLVLMATDKGSPALVGSATLTVLVVDTNDNRPTIPQ--PWELRVSEDALLGSEIAQVTGN 2299

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGK 134
            D+     + Y +      G   F +    G +  TG L     ++Y + + A D    G 
Sbjct: 2300 DVDSGPALWYVLSPSGQRG--PFSVGRYGGRLSLTGPLDYEQRDRYHLQLLAHDGPHQGH 2357

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            ++ T++   V    N  +P F Q+ Y   + E A   S + +++ +   SG 
Sbjct: 2358 ANLTVLVEDV----NDNAPTFSQSLYQAMLLEHAPPGSAILSVSATDRDSGA 2405


>gi|327271397|ref|XP_003220474.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Anolis carolinensis]
          Length = 2944

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 24/192 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A +      +   +L+V + D ND+ P        Q +
Sbjct: 245 VTTAEELDRETKSSHVFR--VTATDHGVPRRTAMATLSVTVADTNDHDPVFE-----QQE 297

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSN-TGLHK-FRIDPRSGVIETT 113
             E+ R+       ++ + ATD D   NA I   +YH+ N  G++K F IDP+SGVI T 
Sbjct: 298 YKESMRENLEVGYEVLTVRATDGDASPNANI---LYHLLNGRGVNKIFEIDPKSGVIRTN 354

Query: 114 GKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           G +   A E Y + V+A D G   G  S T      V   N  SP F +  Y V V E  
Sbjct: 355 GLVDREAVESYQLIVEANDQGRDPGPRSTTATIHITVEDDNDNSPQFSEKRYVVQVPENV 414

Query: 169 SINSTVATITVS 180
           + N+ V  +  +
Sbjct: 415 ASNTHVLRVNAT 426



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 8/178 (4%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           +D D  +   +   + AR+      S    L + +ND+NDNAP+  +    Q    E   
Sbjct: 773 MDLDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQF-LRDNYQGSVYEDVP 831

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYS 123
           A   ++++ ATD D G+N  + Y+ +   + G   F I+  SG++ T  +L       Y 
Sbjct: 832 AFTSVLQVSATDRDSGLNGRVFYT-FQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYE 890

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +   A D G  + +T +EV + V   N   PVF+Q+ +D+ V E + I   VA IT S
Sbjct: 891 LRAYAVDKGVPAMRTPIEVHITVLDVNDNPPVFEQDEFDIFVEENSPIGLVVARITAS 948



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 27/197 (13%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PI 59
           +++V+ E LDR+  N   + F V AR+      +   S+++ + D+NDN P        +
Sbjct: 563 WILVASE-LDRE--NVDFYNFGVEARDHGNPPMTSSASVSITILDVNDNNPEFTQKEYSM 619

Query: 60  QIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           ++    A    ++ + A D D  VN+ ITY I   +    ++F I  +SG     G LI 
Sbjct: 620 RLNEDAAVGTSVLTVSAIDRD--VNSVITYQI--TNGNTRNRFSITSQSG-----GGLIT 670

Query: 119 ---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                       Y +T+ A+D T   ++Q  V V+     NT  PVFQ + Y VN++E  
Sbjct: 671 LALPLDYKLERHYLLTITASDGTRLDTAQVFVNVT---DANTHRPVFQSSHYTVNINEDR 727

Query: 169 SINSTVATITVSRLASG 185
            + +TV  I+ +   +G
Sbjct: 728 PVGTTVVIISATDEDTG 744



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 28/195 (14%)

Query: 11  RDPPNPGK-FRFQVIAR---EKQGTAASVPVSLTVNLNDIN-DNAPRLP----------- 54
           R+ P PG+  R  ++ R   E + T     + L  +L +++ +  P+LP           
Sbjct: 121 RNLPGPGRPTRLGLLCRQEEEAEETFVRWDLGLAASLREVHQERGPQLPGDRLRKKRNAN 180

Query: 55  -----MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDP 105
                  P  Q+   E R     ++ ++A D D G    + YS+  + ++  + F  IDP
Sbjct: 181 ASPQFQAPTYQVSVPENRPAGTPVIMLKAVDPDEGEWGRLDYSMDALFDSRSNSFFAIDP 240

Query: 106 RSGVIETTGKLIAGEQYS--ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDV 162
           RSG + T  +L    + S    V ATD G      +  +SV V   N   PVF+Q  Y  
Sbjct: 241 RSGAVTTAEELDRETKSSHVFRVTATDHGVPRRTAMATLSVTVADTNDHDPVFEQQEYKE 300

Query: 163 NVSEGASINSTVATI 177
           ++ E   +   V T+
Sbjct: 301 SMRENLEVGYEVLTV 315



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +F+ID  +G + T   L   +Q  Y++ + 
Sbjct: 733 VVIISATDEDTGENARITYFM----EDSIPQFKIDMDTGAVTTQMDLDYEDQVSYTLAIT 788

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F ++ Y  +V E     ++V  ++ +   SG
Sbjct: 789 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDNYQGSVYEDVPAFTSVLQVSATDRDSG 847



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ + + D NDN+P+      + +Q  E   +   ++++ ATD D G NA + YSI
Sbjct: 382 STTATIHITVEDDNDNSPQFSEKRYV-VQVPENVASNTHVLRVNATDRDKGSNALVHYSI 440

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
              +  G  +F ID ++G I+   +L     ++YS+ ++A D GG+   +    +V + V
Sbjct: 441 MSGNTRG--QFYIDAQTGNIDVVSQLDYEMNKEYSLRIRAQD-GGRPPLSNISGLVAIQV 497

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +   N  SP+F    +   V E   +  +V  I      SG
Sbjct: 498 L-DVNDNSPIFVSTPFQSTVLENVPVGYSVIHIQAIDADSG 537


>gi|344257579|gb|EGW13683.1| Protocadherin-16 [Cricetulus griseus]
          Length = 3015

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 18/196 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 418 YLVCVARRLDREERD--VYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 475

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 476 EPLPEVALPG----SFVVRVTAQDPDQGTNGQVTYSLAPGTHT--HWFSIDPTSGIITTA 529

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 530 ATLDYELEPQPQLIVLATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 589

Query: 171 NSTVATITVSRLASGC 186
            +    +T +   SG 
Sbjct: 590 GTCFLQVTATDADSGS 605



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2061 HYHLQLLAHDGPHEGHA-----NLTVLVEDVNDNAPTFSQSLYQVMMLEHTPPGSAILSV 2115

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++ G   F +DP +G + TT G +  G++      + ++A
Sbjct: 2116 SATDRDSGANGHIS---YHLASPG-EGFSVDPNNGTLFTTVGAVALGQEGPGVVDVVLEA 2171

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+ ++  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2172 RDHGAPGRVARATVHVQLQ-DQNDYAPSFTLPHYRVAVSEDLPPGSTLLTL 2221



 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 12/135 (8%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ DIND AP  P      +  +       ++ ++ATD DLG N ++TY        
Sbjct: 1352 LTVSVVDINDEAPAFPHQEYSVLLRENSPPGTSLLTLKATDPDLGANGQVTY-----GGV 1406

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKS--SQTIVEVSVVPGPNTRS 152
                F +DP +GV+ T   L   EQ  I  TV A D G     +  IV V+V    N  +
Sbjct: 1407 SGESFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHAIVRVTVE-DENDHT 1465

Query: 153  PVFQQNTYDVNVSEG 167
            P F      + V EG
Sbjct: 1466 PTFGNTHLSLEVPEG 1480



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
            R +++ + + G A +  V LT+ L D NDNAPR   P       ++      ++++EA D
Sbjct: 1856 RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 1914

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
             D G   +I+YS+   S      F +DP +G I TT  L   I  E   + + ATD G  
Sbjct: 1915 LDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREIWAET-RLVLMATDRGSP 1972

Query: 133  ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
               G ++ T++ +      N   P   Q  +++ VSE A + S +A +T + + SG  + 
Sbjct: 1973 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2027



 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E   +   +++++A
Sbjct: 1538 FKLQIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPAYSVEVPEDAPSGTLLLQLQA 1596

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
             D D G N  +   +Y++       F ++P SG + T   L       Y+ +V A D   
Sbjct: 1597 HDPDDGDNGRV---MYYLGAGTAGAFLLEPTSGELRTATALDREHCASYAFSVNAVDGAA 1653

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVF 155
             G  S T+     V   N  +P F
Sbjct: 1654 AGPLSTTVPITITVRDVNDHAPTF 1677



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 17/185 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQ 62
           +LDR+  N   +  Q+ A +           L V L DIND+AP     R   +    + 
Sbjct: 208 DLDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSESLA 265

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L   ++ 
Sbjct: 266 PGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDSHTGLLRLERPLDFEQRR 322

Query: 122 -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGASINSTVA 175
            + + VQA D G         V+V V   N   P    +F        VSE A     VA
Sbjct: 323 VHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAPPGQLVA 382

Query: 176 TITVS 180
            I+VS
Sbjct: 383 RISVS 387



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 26/175 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVK 72
            + +  V A +  GT  ++ V +TV + D+ND+ P  P+     +    A  Q     +  
Sbjct: 2389 RHQLVVQAADPAGTHFAL-VPVTVEVLDVNDHGPAFPLN---LLSTSLAENQPPGTLVTT 2444

Query: 73   IEATDNDLGVNAEITYSIYHV--SNTGLHKFRIDPRSGVI--------ETTGKLIAGEQY 122
            + A D D G    + YS+        G   F ++  +G +        E TG       +
Sbjct: 2445 LHAIDGDAGTFGRLQYSLLEAMPGPEGREAFSLNSSTGELRARVPFDYEHTGS------F 2498

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V A D G  S+   V V +V G +   PVF   T+   V EGA    ++  +
Sbjct: 2499 RLLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPTFHFQVPEGAQRGHSLGHV 2552



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)

Query: 27   EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNA 84
            ++ GTA     ++ V++ + ND++PRL   P     A        + ++ ATD D G N 
Sbjct: 1080 QQTGTA-----TVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNG 1134

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIV 140
             +TYS+  +S      FRI P++G + T   L    Q  + + V   D+G   +S+   V
Sbjct: 1135 RLTYSLRQLSEDS-KAFRIHPQTGEVTTLQSLDREHQSSFQLLVHVQDSGSPPRSTTGTV 1193

Query: 141  EVSVVPGPNTRSPVFQQ 157
             ++V+   N  SP F Q
Sbjct: 1194 HIAVL-DLNDNSPTFLQ 1209



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++     S  V +TV + D+NDN       PP+  QA              
Sbjct: 2284 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDN-------PPVFTQASYRVTVPEDMPVGA 2336

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++ +EA+D D G +  + +++      GL  F +D  SG +     L    Q  + + V
Sbjct: 2337 ELLHVEASDADPGPHGLVRFTLSSGDPLGL--FELDENSGALRLAHPLDCETQARHQLVV 2394

Query: 127  QATDTGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   VEV  V   N   P F  N    +++E     + V T+
Sbjct: 2395 QAADPAGTHFALVPVTVEVLDV---NDHGPAFPLNLLSTSLAENQPPGTLVTTL 2445



 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++P    Q       I  + A D D G N+++T+S+    
Sbjct: 878  VLLDDVNDNSPAFPAPEDTVLLP----QNTSPGTPIYTLRALDPDSGANSQVTFSLL--- 930

Query: 95   NTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              G   F +DP +G I          G  Y + V+A D G     +   + VV    G +
Sbjct: 931  AGGDGMFTVDPITGHIRLMGPLGPPGGPAYELEVEARDGGSPPRTSHFRLRVVIQDLGIH 990

Query: 150  TRSPVFQQNTYDVNV 164
              +P F   TY V++
Sbjct: 991  GLAPRFDSPTYRVDL 1005



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +QI
Sbjct: 102 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQI 148

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV--IETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++ R G         ++
Sbjct: 149 PEHTALGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPNGAPVPELVV 205

Query: 118 AGE-------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            G+        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 206 VGDLDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 264

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 265 APGSPVLQVFASDADAGA 282


>gi|324499655|gb|ADY39858.1| Protocadherin-like wing polarity protein stan [Ascaris suum]
          Length = 2637

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 17/170 (10%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVKIE 74
            +V A E+     S   ++ V++ D+ DNAP    I  I     E R        +  + 
Sbjct: 247 LKVTAYERLEPFVSASTTVIVDVLDVQDNAP----IFEINSYFAEVREDAPIGTTVASVF 302

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
           A D D G+N E+ YS+     + L   RI+P SGVI+T  +L     +   ++V ATD G
Sbjct: 303 ARDLDAGLNGEVEYSLSETEGSNL--LRINPSSGVIQTAAELDRETLDVIRLSVFATDKG 360

Query: 133 GK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  +VE++++   N   PVF+  +Y+V + E  ++ + +  +  +
Sbjct: 361 DPPMSSSALVEITIL-DVNDNCPVFEMGSYNVTIMENITLPAMIIQLKAT 409



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 10/160 (6%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLG 81
           A++    A S  V+ TV + D+ND+AP L +    QI   E      ++ ++ A D D+G
Sbjct: 459 AKDSSQPAQSSTVTCTVYVADVNDHAP-LFVASQQQIFIDENTPLGHEVGRVFAVDQDVG 517

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQT 138
            N  + YS+   S++G   F I+  SG I+  G+L     E + + V+A D G    S T
Sbjct: 518 TNGIVRYSLDEGSSSG---FEINAISGSIKIRGELDREKNETHILKVRAKDGGDPPLSDT 574

Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           I+    +   N  +P F+ + Y+V V E     + + ++T
Sbjct: 575 IIITIHLRDVNDNAPYFEPDVYNVTVPESTPRGAQIISVT 614



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 49  NAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP 105
           NAP   +  P  ++  E      +++ ++A D D G NA ITY+I          F ID 
Sbjct: 687 NAPPSFLTHPFTVRISEHSAIGSEVIHLQAEDGDRGTNAMITYTIDSPD------FAIDE 740

Query: 106 RSGVIETTGKLIAGEQYS----ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD 161
           ++G+I     L    + +    +TVQ   +   ++ T +E+ ++   N  +PVF  + Y 
Sbjct: 741 KTGLITVASDLDREVRTTYVVNVTVQDHASPPLTASTTIEI-ILEDVNDNAPVFSSSNYT 799

Query: 162 VNVSEGASINSTVATITVSRLASG 185
           + +SE   + ++   IT + L +G
Sbjct: 800 MTISEDTPVGTSFMQITATDLDAG 823



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 15/186 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           L+    +LDR+      +   V  ++      +   ++ + L D+NDNAP        M 
Sbjct: 744 LITVASDLDREVRT--TYVVNVTVQDHASPPLTASTTIEIILEDVNDNAPVFSSSNYTMT 801

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTG 114
                  G +  QI    ATD D G NA + Y I       L    F++D  SG +    
Sbjct: 802 ISEDTPVGTSFMQIT---ATDLDAGSNAFVDYFIDVNDKRALKVDAFKLDRSSGTLRVHK 858

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASIN 171
           KL   +   + I V A D G  S  +   V+VV    N  +P F+   YD+ ++E + I 
Sbjct: 859 KLDREQNDIHVIPVIARDRGNPSLSSSATVTVVLSDVNDNAPQFESCRYDLWIAENSPIG 918

Query: 172 STVATI 177
           + V TI
Sbjct: 919 TVVGTI 924



 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 24/170 (14%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI---------PPIQIQAGEARRQIVKI 73
            VIAR++   + S   ++TV L+D+NDNAP+              PI    G        I
Sbjct: 872  VIARDRGNPSLSSSATVTVVLSDVNDNAPQFESCRYDLWIAENSPIGTVVG-------TI 924

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDP-RSGVIETTGKLI-----AGEQYSITVQ 127
             A D D+G NA I + I+   +  L     DP + GV+    + I        ++ + +Q
Sbjct: 925  VARDRDVGHNARIHFKIFGGVDAKLFDIEADPNQEGVVHILSRKIFDYEAKNNKFYLEIQ 984

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A+   G+ S T+     V   N   P  +     +   +G S +  + T+
Sbjct: 985  ASS--GQLSSTVPIYVHVSDVNDNKPQLRDFVVAIASYDGESFDPQIGTV 1032



 Score = 45.4 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 17/167 (10%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-------IPPIQIQAGEARRQIVK 72
           R  V A +K     S    + + + D+NDN P   M       +  I + A      I++
Sbjct: 351 RLSVFATDKGDPPMSSSALVEITILDVNDNCPVFEMGSYNVTIMENITLPA-----MIIQ 405

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG-EQYSITVQATDT 131
           ++ATD D G N ++ YSI     +G   F ID  +G++    KL       S+ ++A D+
Sbjct: 406 LKATDADFGENGKVHYSIVASGASG---FSIDYDNGMVFLREKLDTRLSPVSLIIRAKDS 462

Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +  + V  +V V   N  +P+F  +   + + E   +   V  +
Sbjct: 463 SQPAQSSTVTCTVYVADVNDHAPLFVASQQQIFIDENTPLGHEVGRV 509



 Score = 40.8 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 11/159 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR-RQIVKIEATDN 78
            +V A++      S  + +T++L D+NDNAP   P +  + +     R  QI+ + A D+
Sbjct: 559 LKVRAKDGGDPPLSDTIIITIHLRDVNDNAPYFEPDVYNVTVPESTPRGAQIISVTAKDD 618

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY-SITVQATDTGG-KSS 136
           D   +  ITY I  +         +  +  ++  +      +    + V ATD GG K  
Sbjct: 619 D--KDQRITYKIQRMDRDIFTLTDLGEQGALLSLSDSFRNTDDVIEVIVSATDQGGLKGM 676

Query: 137 QTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            T+ + VS V  P    P F  + + V +SE ++I S V
Sbjct: 677 CTVFIVVSDVNAP----PSFLTHPFTVRISEHSAIGSEV 711


>gi|351711409|gb|EHB14328.1| Protocadherin-19 [Heterocephalus glaber]
          Length = 1145

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 20/197 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           LVV K +LDR+      + F++IA +         V L++ + D NDN P          
Sbjct: 190 LVVEK-SLDRE--TQSHYSFRIIALDGGDPPRLGTVGLSIKVTDSNDNNPVFSESTYSVS 246

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG 114
           +P    +       ++++ A+D D G N ++ YS Y +V++     F IDP SG++  TG
Sbjct: 247 VP----ENSPPNTPVIRLNASDPDEGTNGQVIYSFYGYVNDRTRELFHIDPHSGLVTVTG 302

Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV---FQQNTYDVNVSEGA 168
            L    G +Y + VQA D G  S     +V+V V   N   PV      N+  V VSE +
Sbjct: 303 ALDYEEGHEYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSESS 362

Query: 169 SINSTVATITVSRLASG 185
                +A + VS   SG
Sbjct: 363 PPGYVIALVRVSDRDSG 379



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 11/187 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V+K+ +DRD       +  +I+ E   ++  + V + V + D+NDNAP  P    I++
Sbjct: 80  LLVTKQKIDRDLLCRQSPKC-IISLEVMSSSMEICV-IKVEIKDLNDNAPSFPAAQ-IEL 136

Query: 62  QAGEARRQIVKIE---ATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG---VIETTG 114
           +  EA     +I    A D D G     TY +      GL  K R D       V+E + 
Sbjct: 137 EISEAASPGTRIPLDGAYDPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSL 196

Query: 115 KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  YS  + A D G       V +S+ V   N  +PVF ++TY V+V E +  N+ 
Sbjct: 197 DRETQSHYSFRIIALDGGDPPRLGTVGLSIKVTDSNDNNPVFSESTYSVSVPENSPPNTP 256

Query: 174 VATITVS 180
           V  +  S
Sbjct: 257 VIRLNAS 263


>gi|326429811|gb|EGD75381.1| cadherin [Salpingoeca sp. ATCC 50818]
          Length = 3697

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 22/165 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPP 58
             V S   LDRD     ++RF ++  +  G   TA +V     V L DINDNAP       
Sbjct: 2789 FVGSPAALDRDTRE--EYRFWLVVTDADGQEDTAMAV-----VTLTDINDNAPEFSQ-AQ 2840

Query: 59   IQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
              +   E+R   R    I ATD D G NA ITY+I  V      +F ID  +G +     
Sbjct: 2841 YSVSLAESRPLGRVFAGISATDADAGANAAITYAI--VGGNEEDRFAIDDVTGELSLVAS 2898

Query: 116  L--IAGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVF 155
            L   A   Y +TVQA+D G    +SS   V ++V+   N  +PVF
Sbjct: 2899 LNFEATTSYVLTVQASDAGSPMPQSSTASVAITVL-DVNDNAPVF 2942



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 13/185 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI 61
            V+   +LD +   PG   F V A +   T+A  PV  TV L D+ND  P L  ++ P+ +
Sbjct: 1611 VLLARSLDFEAMGPGPISFTVTATDGGLTSAPYPV--TVELQDVNDVDPVLGDVLAPLTV 1668

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETT-GKLIAG 119
            +   +   I  I A+D D+  + ++ +SI       +  +  ID  +G + T+ G +I  
Sbjct: 1669 REERSSAIIGTIPASDADVVDDGQLRFSIVATDPAFVQARIEIDEVTGELSTSAGAVIDR 1728

Query: 120  EQ-------YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            E+       +++TVQ  D+G +++     VSV    N + PVF  + Y  NV E  +  +
Sbjct: 1729 EEVEGGLDAFTVTVQVVDSGARTATREYTVSVT-DINDKRPVFDTSVYMANVQENLAGGT 1787

Query: 173  TVATI 177
             V T+
Sbjct: 1788 FVTTV 1792



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATD 77
            F F ++A +          ++TV L+D NDNAP       +   A +    +   + ATD
Sbjct: 2174 FSFDLVASDFGTPQLQATATITVTLSDENDNAPVFSNATYMFSLAEDVSLGVFGSVSATD 2233

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGK 134
             D GVNA I Y++  +++TGL  F ID  +G +  T  L   +  + Y++TV+A+D G  
Sbjct: 2234 ADTGVNALIEYTL--LTSTGL--FAIDAATGDLSLTAALDYDVPPQMYTLTVEASDGGAP 2289

Query: 135  S-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV-ATITVSRLASGC 186
            S + T   V  V   N  +PV  ++ Y   V E     STV A I+ +   SG 
Sbjct: 2290 SMATTTTVVVHVLDVNDNAPVLSRSVYHAVVDENMQGASTVIANISATDADSGA 2343



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 24/164 (14%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK----------IEATDNDL 80
           T  S    + VN+ DINDN P         I +G A +++ +           E TD DL
Sbjct: 629 TGVSAQAYIIVNVMDINDNPPEFA-----GINSGIATKRVTEGTPADFLVYTYEVTDADL 683

Query: 81  GVNAEITY-SIYHVSN----TGLHKFRIDPRSGVIETT---GKLIAGEQYSITVQATDTG 132
            ++   +  SI   SN    TG     +DP +G + T     +   G+++  T+Q TDT 
Sbjct: 684 TMSVNFSIISIRTASNEVDYTGPTPIYLDPLTGQLYTARVFDRETDGDEFFFTLQVTDTQ 743

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +   +V+  + +   N  +PVF Q+ Y V++ E  S ++++A
Sbjct: 744 DPTQFALVDDRLFIADLNDNAPVFSQSVYAVSIPETFSTSTSLA 787



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIV-KIEATDNDLGVN-AEITYSIYHV 93
            + + V+L + NDN P        ++ Q G A R +V  + A D D   + A++ YSI   
Sbjct: 2505 LDVNVDLTNENDNNPEFTQQFVYRVVQEGTAARTVVAHLVANDRDEAASPADVVYSIVA- 2563

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNT 150
               G   F +D   G + TT   I  E     + TVQA D GG+     ++V+ V   N 
Sbjct: 2564 --PGTPYFAVDADLGTVHTTDVAIDYEMTQTINFTVQAADAGGRIGTVDIQVA-VEDIND 2620

Query: 151  RSPVFQQ-NTYDVNVSEGASINSTV 174
              PVFQ   TY ++V E   + + V
Sbjct: 2621 NDPVFQNAGTYAISVDENTPVGTEV 2645



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 9/131 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            +DR+    G   F V  +     A +     TV++ DIND  P     +    +Q   A 
Sbjct: 1726 IDREEVEGGLDAFTVTVQVVDSGARTATREYTVSVTDINDKRPVFDTSVYMANVQENLAG 1785

Query: 68   RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-------IAG 119
               V  ++ATD D    A  T + Y +S   L  F+ID  +GVI TT +L       +  
Sbjct: 1786 GTFVTTVQATDGDRAGTAFATIARYTISGDSLALFQIDASTGVITTTRQLNAEAPLHVPD 1845

Query: 120  EQYSITVQATD 130
              YS TV A D
Sbjct: 1846 GGYSFTVTAYD 1856



 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 23/168 (13%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQ 60
            +V +    DR+      +R  + A ++   +  + ++ + V + D+NDN P+        
Sbjct: 1398 VVTTAAAFDRE--TTASYRLVLRASDRANASGLLTITEVLVTITDVNDNTPQFVTQSVFD 1455

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +    A   +V K+  TD D GVNA + YS+         K  ID    V   T      
Sbjct: 1456 VAENAAVGTLVAKVVVTDQDEGVNAALAYSL---QGPDADKLSIDASGNVTVNTAN---- 1508

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVV----PGPNTRSPVFQQNTYDVN 163
                    ATD   ++  T+V   VV      PNT       N  DVN
Sbjct: 1509 --------ATDIDRETQSTLVFDVVVTDLGSAPNTNRVTLTANVLDVN 1548


>gi|301767670|ref|XP_002919249.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2-like [Ailuropoda melanoleuca]
          Length = 2924

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 833

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 834 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 890

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 891 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 947



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 242 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 294

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +         + F IDPRSGVI T G
Sbjct: 295 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPRSGVIRTRG 354

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 355 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 414

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 415 PGAPVLRVTAS 425



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 732 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 787

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 788 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 846



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+      +   S++V + D+NDN P     P   
Sbjct: 562 WISVAAE-LDREEVD--FYSFGVEARDHGTPMLTASASVSVTILDVNDNNPTFTQ-PEYT 617

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 618 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 668

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 669 SLALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDA---NTHRPVFQSSHYTVNVNED 725

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 726 RPAGTTVVLISAT 738



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 381 SATAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI 439

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 440 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 496

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 497 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 528



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 873  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 930

Query: 57   ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                 PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 931  VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 981

Query: 113  TGKLIAGE--QYSITVQAT 129
               L   +  +Y + +QAT
Sbjct: 982  LVDLDYEDRPEYILVIQAT 1000


>gi|75071591|sp|Q6KEQ9.1|PC11X_PIG RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the X chromosome;
           Short=PCDH-X; Flags: Precursor
 gi|48146998|emb|CAD92443.1| protocadherin [Sus scrofa]
          Length = 1117

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L + + D NDNAP    P +     +      Q+ KI A D D G NAEI Y +   + +
Sbjct: 452 LLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQLTKISAMDADSGRNAEINYLLGFDAPS 511

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  SP
Sbjct: 512 ---EFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSP 568

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           VF  N Y+  V E    + TV  ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLP 54
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P            
Sbjct: 624 VIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVPSSNYSFE 683

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           ++PP    +      +  + A DND G+NAE+ YS+   +  GL  F ID  SG I    
Sbjct: 684 LVPP----STNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGL--FIIDQTSGNITLKE 737

Query: 115 KLIAGE--QYSITVQATDTGGKSS 136
           K +  +   + + V+A D G   S
Sbjct: 738 KCVFADLGLHRLVVKAKDLGQPDS 761



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      + AT D D G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPDTGINGVQNYHLIK-- 180

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G   F +D    VIET       +LI  ++        Y + ++  D G   +SS  I
Sbjct: 181 --GQSIFGLD----VIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    + R PVF++N  +V++ E A + S+V  +
Sbjct: 235 LQVSVADTNDNR-PVFKENEIEVSIPENAPVGSSVTQL 271



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           L+V KE LDR+  +   +  ++   +      S    L V++ D NDN P      + + 
Sbjct: 201 LIVQKE-LDREEKD--TYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
            P     G +   + ++ ATD D+G NA+I +   + +SN     F ++  +G+I     
Sbjct: 258 IPENAPVGSS---VTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEP 314

Query: 116 LIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           L   E   + + V A+D G   ++ +V V+V      +P  + R  +   N   V +SE 
Sbjct: 315 LDREESPNHKLLVLASDGGLTPARAMVLVNVTDINDNIPSIDIRYIINPING-TVVLSEN 373

Query: 168 ASINSTVATITVS 180
           A +N+ +A ITV+
Sbjct: 374 APLNTKIALITVT 386


>gi|405951763|gb|EKC19648.1| Protocadherin-9 [Crassostrea gigas]
          Length = 1002

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 18/204 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           ++ KE L+R+  +   + F V+AR+      S  + + + ++D+NDN+P+    +  I++
Sbjct: 196 LIVKEALNREQRD--NYHFSVVARDGGSPPLSGTLKVNITISDVNDNSPKFSQSVYYIEV 253

Query: 62  QAG-EARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG--KLI 117
           +        I+ + ATD D G N ++ Y +  H S T L  F ID  +G +      K +
Sbjct: 254 KESVNVSSVILTLRATDLDDGKNGKVFYRLSPHQSETVLTSFAIDNSTGDLSVIKPLKYV 313

Query: 118 AGEQYSITVQATDTGGK--SSQTIVEVSVVP-GPNTRSPVFQQNTYD--VNVSEGASINS 172
            GEQ+ I V+A+D G +  +SQ +V V+V+  G N  S      + D    VSE AS  +
Sbjct: 314 KGEQHVIIVEASDFGDQPLTSQALVNVTVLDVGNNPPSINLNLLSSDSLAKVSEFASRGT 373

Query: 173 TVATITVSRLASG------CAIMN 190
            VA I V    +G      C I N
Sbjct: 374 VVAHIAVDDPDTGKNGEIMCTIDN 397



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 10/146 (6%)

Query: 38  SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           S  V + D NDNAP   L +     ++       IV ++A D D   NA++ YS+   SN
Sbjct: 445 SFYVEIEDENDNAPIFDLSVYTAGIMENNNVGDVIVHVQANDADDKNNADLLYSLSE-SN 503

Query: 96  TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
            G+  F ID +SG+I T  +L       YS+ V A D G    S    V +SV+   N  
Sbjct: 504 NGM--FYIDEKSGIIRTQARLDRENVSSYSVIVIARDQGDPALSGSATVIISVL-DKNDN 560

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
            P+F Q+ Y   V+E A   S V  +
Sbjct: 561 EPMFNQSRYTFTVNENAPAGSQVGIL 586



 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 16/109 (14%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI------- 61
           LDR+  N  ++ F   AR+K   A +V   +T++LND NDN P++    P Q+       
Sbjct: 623 LDREVQN--RYEFIARARDKDHEATAV---VTIHLNDKNDNRPKV--TSPSQLNNTVYVD 675

Query: 62  QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
           +  E    +  I A D D G+N+++ Y I   +++G   F + P  G +
Sbjct: 676 KHTEVNTMVTIIRAYDLDSGINSQLIYEIVGRNDSG--HFDLHPDKGQV 722


>gi|195401052|ref|XP_002059128.1| GJ16197 [Drosophila virilis]
 gi|194156002|gb|EDW71186.1| GJ16197 [Drosophila virilis]
          Length = 5168

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
            F   ++A +           + +N+ D N+N P+      + P+  QAG  +R +V++ A
Sbjct: 3097 FALTILATDNGKPPLYTECLVNINIVDANNNPPKFEHTEYLSPLPEQAGAGQR-VVRVHA 3155

Query: 76   TDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG 132
             D+ D+GVNAEI YS+  +S+     F I+   G +      KL A  ++ + V+ATD G
Sbjct: 3156 NDDCDVGVNAEIDYSL--ISSNLSAYFTINKHDGWVTLIKQIKLPANSRFELNVRATDRG 3213

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                S QT V + VV   N  +P F   +Y V V E   I +T+ T++ +   +G
Sbjct: 3214 VPPLSDQTRV-IVVVTDENRHAPEFNPRSYQVIVPENEPIGTTIITVSATDKDTG 3267



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 11/178 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
           LDR+     K+   V+A +K          L +++ND+ND+ P         +  +    
Sbjct: 466 LDRE--EISKYNLTVVAIDKGTPERKAIAYLIIDVNDVNDHEPVFEKSEYTAVLSELAPT 523

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-- 124
              +  I ATD D GVNA++ Y I  ++   L  F ID  +G+I TTG L    Q S+  
Sbjct: 524 GTFVTSIVATDEDTGVNAQVFYEI--LTGNELKWFNIDTTTGLIVTTGPLDREVQASVEL 581

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++ A D G   K + T ++V+++   N  +P F Q   +V++SEG S  + VA ++ +
Sbjct: 582 SISARDGGPNPKFAYTQLKVTIL-DENDEAPHFGQQELNVSLSEGVSPPTIVALLSAT 638



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 17/130 (13%)

Query: 37   VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            V+LT+ + D NDN P+       ++ P  I+AGE    +    ATD D G NA +   +Y
Sbjct: 2587 VNLTIKVGDTNDNVPKFEANNFNIVVPNNIRAGEF---VFGARATDLDEGENAMV---VY 2640

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
            +++    H F + P +GVI T  +L    +      Y+I +QATD G  S  +  E++V 
Sbjct: 2641 NINGKDQHIFEVHPSTGVIRTKMELAQKYKPNVDIIYNINIQATDQGYMSQISTAELTVQ 2700

Query: 146  PGPNTRSPVF 155
              P    PVF
Sbjct: 2701 LRPVELFPVF 2710



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 9/170 (5%)

Query: 15   NPGK-FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIV 71
            +PG  F  ++IA +    + S  +SL VN+ D+ND+ P           ++  +   +  
Sbjct: 1017 DPGTVFYVEIIATDGGTPSLSSRLSLPVNIADVNDHTPVFDHTSYETSLLETTKVNTRFF 1076

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             + A+D+DLG N  I Y I  +      KF + P  G +     L   E+  Y++T+  +
Sbjct: 1077 ALAASDSDLGPNGRIAYEI--IDGNSDRKFGVFP-DGFLFVRAPLDREERDYYALTISCS 1133

Query: 130  DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G  S  ++V V + V   N   P F  +T+  N+ E A  N+ V  +T
Sbjct: 1134 DAGTPSRSSVVPVVIHVIDENDNPPQFTNSTFTFNIPENAPANTFVGKLT 1183



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 26/192 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMI 56
            +++LDR+     K ++ +  R   G   +    + + ++D NDN P          +P  
Sbjct: 1905 RDSLDRE----AKDKYNMRIRVSDGVQYT-ETDIIIQVDDTNDNPPVFEESVYSFDIPEN 1959

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
             P   Q GE       I A D DL  NA+++Y++  VS+     F ++P++G +  T KL
Sbjct: 1960 APRGYQVGE-------IVAKDADLAQNAQVSYAV--VSDWANDVFSLNPQTGALTLTAKL 2010

Query: 117  IAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
               +   Y + VQA D G  S  T + V   V   N  +P+F   +Y   + E   +   
Sbjct: 2011 DYEDVQHYILLVQAQDNGQPSLSTTITVYCNVLDLNDNTPLFDPMSYSSEILENVLVGKE 2070

Query: 174  VATITVSRLASG 185
            V T++   + SG
Sbjct: 2071 VVTVSAKDIDSG 2082



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAA--SVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           +++++ LDR+      +   VIAR+ QG  A  S   ++ ++++DINDN+P       I 
Sbjct: 673 LMTRKALDRE--TMANYEIFVIARD-QGAPAPQSATATVCLSISDINDNSPEFYPKHYIY 729

Query: 61  IQAGEA------RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---- 110
               EA       R ++ + ATD D+G NA ITY++    + G + F +D R+G +    
Sbjct: 730 TLKEEADVAPNSMRTLLNVTATDRDVGDNALITYNL---ESGGDNVFHVDSRTGAVIFAV 786

Query: 111 --ETTGKLIAGEQYSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +   K +    Y + + A D+G K S    +VE+ V+   +T       N YD  V E
Sbjct: 787 RGDDALKQLKKPYYKLRISARDSGEKRSLQDAVVEI-VMESKSTTLDFDAHNGYDFQVVE 845



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L V ++ LD +  +  ++   V A +    +    + LT+N+ D NDN P +  +I   +
Sbjct: 2768 LSVGQDGLDYELAH--QYEIWVAAADSDRPSLRTVMKLTINVTDANDNPPVMEKLIYNAE 2825

Query: 61   IQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I   E   Q IV I+A D D G N E++Y + +  N     F I   SG I TT +L   
Sbjct: 2826 IMEEETPPQLIVAIKAKDRDSGENGEVSYRLKNDYNG---TFEI-VDSGEIYTTMRLDRE 2881

Query: 120  E--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   Y++ V+A D G         V + +   N   P F +  Y +NV+E A I S V  
Sbjct: 2882 EFSDYALVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTR-LYSLNVTENAEIGSFVIC 2940

Query: 177  ITVSRLASG 185
            +T S L  G
Sbjct: 2941 VTSSDLDLG 2949



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 8/132 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            S+ ++L D NDN P+   +  + + +  E    ++ + ++D DLG NA  TYS     N 
Sbjct: 2905 SVLLHLLDKNDNPPKFTRLYSLNVTENAEIGSFVICVTSSDLDLGENANATYSF--SENP 2962

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G  KF+ID +SG I   G++   +Q  Y + V A+D G   ++T + ++ +   N  +P 
Sbjct: 2963 G-KKFKIDSQSGNITVAGQIDREQQDEYILKVVASD-GAWRAETPITIT-IQDQNDNAPE 3019

Query: 155  FQQNTYDVNVSE 166
            F+ + Y  N  E
Sbjct: 3020 FEHSFYSFNFPE 3031



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 45   DINDNAPRLP--------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            D+NDNAP           +  P     G+   +I    A D D GVN+ I Y+  +  + 
Sbjct: 941  DLNDNAPNFAQDRDTEASIWLPEDTAVGQ---EIYLSRARDRDAGVNSRIRYNFTYNPD- 996

Query: 97   GLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
               +FRI+P +GV+     + A  G  + + + ATD G  S  + + + V +   N  +P
Sbjct: 997  --QQFRINPATGVVYLQKPVRADPGTVFYVEIIATDGGTPSLSSRLSLPVNIADVNDHTP 1054

Query: 154  VFQQNTYDVNVSEGASINSTVATITVS 180
            VF   +Y+ ++ E   +N+    +  S
Sbjct: 1055 VFDHTSYETSLLETTKVNTRFFALAAS 1081



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA- 66
           NLDR+  + G ++  + A +         + + V + D+NDN P         +   E  
Sbjct: 235 NLDRE--SRGSYQLNISASDGGSPPRLGFLQVNVTILDVNDNPPIFDH-SDYSVTLNETV 291

Query: 67  --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
                ++++ A+DNDLG N+++TY +        H+F +DP +GVI TT +L   +Q S
Sbjct: 292 MPGSPVLQVMASDNDLGDNSKLTYYLAETE----HQFTVDPETGVISTTVRLNCPQQTS 346



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           + P+ + + + DINDNAP  P  P I +   E   A  +++   ATD D+G N  +T   
Sbjct: 145 TYPIEVRIKVLDINDNAPEFPE-PSIAVSFSESAVAGTRLLLDAATDADIGDNG-VTDHY 202

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V+    +KFR+        D     +ETTG L    +  Y + + A+D G       +
Sbjct: 203 EIVAGNLDNKFRLVTTTNPSGDTSYLHLETTGNLDRESRGSYQLNISASDGGSPPRLGFL 262

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y V ++E     S V  +  S
Sbjct: 263 QVNVTILDVNDNPPIFDHSDYSVTLNETVMPGSPVLQVMAS 303



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 19/171 (11%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA------GEAR---R 68
            ++   +  ++    A +    LT+ L D+NDN       PP+  Q+       E +    
Sbjct: 3307 EYHLNISVKDLGYKALTALAMLTIILTDVNDN-------PPVFNQSEYHGYIAENKPVGT 3359

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
             + +  ATD D   NA I YS +    T  H F I+  +G I +T      E+  Y++ +
Sbjct: 3360 AVFQAHATDKDSPKNAIIHYS-FLARGTDHHFFSINVSNGTILSTASFDYEERRSYTLHI 3418

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            +A +         V    V G N   P F Q+ +  +VSE +S+ + V ++
Sbjct: 3419 KAKNPDSSMESYAVLYVHVLGVNEFYPQFVQSAFHFDVSETSSVGTAVGSV 3469



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLPMIPP 58
            L++    LDR+  +    R  V+AR+   K    +SV +++TV L+D NDNAP       
Sbjct: 1341 LLILAHRLDRE--SQEIHRLTVVARDAAIKNSLTSSVNITITV-LDD-NDNAPEFTQSSS 1396

Query: 59   --IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
                ++   +  ++++  A+D D G+N+++ +SI   +      F ID  SG +     L
Sbjct: 1397 EISVLETSPSGTELMRFRASDADQGMNSQVVFSI--TAGNRRDTFHIDSVSGSLYLHKPL 1454

Query: 117  IAGE--QYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
               +   Y++ + A+D G    S T++   VV   N   P+F        + EG ++ + 
Sbjct: 1455 DYEDITNYTLNITASDCGIPPLSTTVLYNVVVVDDNDNPPIFPSTAIVRQIKEGIALKTP 1514

Query: 174  VATITVSRLASG 185
            + T+T     SG
Sbjct: 1515 IVTVTADDPDSG 1526



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 12/119 (10%)

Query: 25   AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKIEATDND 79
            AR++     +    LT+ + D+NDN   +P+  P Q  A  A        ++++ ATD D
Sbjct: 2257 ARDRGDPPLATQSQLTIKILDVNDN---IPVFDPKQYSASVAENASIGAMVLQVSATDMD 2313

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
             G N  + YSI  VS      F I   +G++     L    +  Y +TV+A D   K S
Sbjct: 2314 EGDNGRVRYSI--VSGDQNRDFSISEDTGIVRVAKNLNYERKARYILTVRAEDCAPKES 2370



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 24/170 (14%)

Query: 22   QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDL 80
            Q ++ +KQ   +S  V +T+ + D+ND AP         +    A   +V  ++A DND 
Sbjct: 2164 QFLSHQKQERLSST-VQVTILIKDVNDEAPVFVSANETTVMENVAINTVVFTVKAIDNDE 2222

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK-----S 135
            G N  I Y              +D +S + +  G   + E    T+  TD   +     +
Sbjct: 2223 GRNGYIDY-------------YLDDKSRLSDDNG---SAEPLPFTLNPTDARDRGDPPLA 2266

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +Q+ + + ++   N   PVF    Y  +V+E ASI + V  ++ + +  G
Sbjct: 2267 TQSQLTIKIL-DVNDNIPVFDPKQYSASVAENASIGAMVLQVSATDMDEG 2315


>gi|390466328|ref|XP_002751246.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
           [Callithrix jacchus]
          Length = 2871

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 731 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 782

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 783 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 839

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 840 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 896



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 191 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 243

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +         + F IDPRSGVI T G
Sbjct: 244 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 303

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 304 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 363

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 364 PGAPVLRVTAS 374



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 511 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYT 566

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 567 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 617

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 618 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 674

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 675 RPAGTTVVLISAT 687



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 681 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 736

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 737 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 795



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 330 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI 388

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 389 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 445

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 446 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 477



 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 822 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 879

Query: 57  ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 880 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 930

Query: 113 TGKLIAGE--QYSITVQAT 129
              L   +  +Y + +QAT
Sbjct: 931 LVDLDYEDRPEYVLVIQAT 949


>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
          Length = 4980

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVLDYEA 1908

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +V+   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTIRVYFNVL-DVNDNPPIFSLNSYSTSLMENLPLGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S    + V+L D+NDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDVNDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG+N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGLNGTVRYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIAVD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSV--IKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GAVPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N  D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPSLLSETTVTINTVDSNDNAPQFLKTKYFTPVTKNVKVGT---K 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 3002 LIKVTAVDDRDFGLNSEVEYLISNENHFG--KFKLDNGTGWISVASSLISDLNQNFLITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  SI + V T++
Sbjct: 3060 TARDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVS 3112



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 15/166 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      +   V+A +K   A S    + V + DINDN P   M    +++  E   
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVF-MQALYKVEINENTL 2168

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
                I+++ A D D G N ++ Y I  +      +FRID  +G I T  K +  E+   Y
Sbjct: 2169 TGTDIIQVYAADGDEGTNGQVRYGI--IDGNANQEFRIDSVTGAI-TVAKPLDREKTPTY 2225

Query: 123  SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            S+TVQATD G   ++  T V + V+   N   P+F+ + Y VNV E
Sbjct: 2226 SLTVQATDRGSTPRTDTTTVNI-VLLDINDFVPMFELSPYSVNVPE 2270



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    + A +    A +   S+TVN+ D+NDN+P     P    P  ++   +   ++ +
Sbjct: 3159 KHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVF--FPDEYFPTVLENAPSGTTVIHL 3216

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A + 
Sbjct: 3217 NATDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNV 3273

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   +++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3274 PDEERCSFATINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V L D+ND  P         +   E      +++ + ATD DLG N  + +S+   + 
Sbjct: 568 LVVTLLDVNDEKPAFSQPEGYAVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQE-AE 626

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
           T    FR+DP SG + T   L   EQ  YS+ V ATD G   +SS   + VS++   N  
Sbjct: 627 TDQRSFRLDPVSGRLSTVASLDREEQAFYSLLVLATDLGSPPQSSMARINVSLL-DVNDN 685

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
           SPVF    Y  ++ E     S + T++ +
Sbjct: 686 SPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  +V   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDTV---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             S + V    V   N   PVF Q +Y+V +SE   +NS
Sbjct: 976  LSSSFVLTVYVHDVNDNPPVFDQLSYEVTLSESEPVNS 1013



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + R+I+ + A 
Sbjct: 2634 KYVIWIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFREDPFVSEILENLSPRKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    H F I+  +G I +   L   +  QY +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNKEHSFTINHATGEIRSIRPLDREKVSQYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +   V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVIINILDENDNAPRFSQ-IFSAYVPENSPLGYTVTRVTTS 2797



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+NDN     +P+L  IP   PI          + K +ATD D G N+ I Y++
Sbjct: 2037 VSIILLDVNDNPPAFLSPKLTYIPENTPIDTI-------VFKAQATDPDSGPNSYIEYTL 2089

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPG 147
                N   +KF I    G +  TG+L   E   Y++TV ATD G  +  +  EV V V  
Sbjct: 2090 L---NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLD 2146

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +PVF Q  Y V ++E
Sbjct: 2147 INDNNPVFMQALYKVEINE 2165



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQALDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   + + V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVGTLVTTITGSSL 2594



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 15/169 (8%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 88  YSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQ 137
            S   V      +FR+D     SG      + + G L      QY + V+  D G    +
Sbjct: 172 RSYRIVQGNEAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRR 231

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAYVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+ +NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDIDINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2897



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +T+ + D+NDN P    I    + A  A      +  I A D D G N E+ Y I    N
Sbjct: 1515 VTILVTDLNDNVPMF--ISQNALAADPAAVIGSVLTTIMAADPDEGANGEVEYEII---N 1569

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
                 F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       PV
Sbjct: 1570 GDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGPV 1628

Query: 155  FQQNTYDVNVSEGASINSTVATI 177
            F Q  Y   + EG  I + V +I
Sbjct: 1629 FTQPKYITILKEGEPIGTNVISI 1651



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGADGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P+F  N Y V +SEG    + V  ++
Sbjct: 3401 -PPIFSLNIYSVQISEGVPTGTHVTFVS 3427



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 8/166 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSFVLTVYVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QAFDKDSGANGEIAYSIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V V+V+    N   P+F    Y     E     S V  +
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKV 1122



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + +VP++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGAVPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLHYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 20/193 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYSIYHVS-NTGLHKF-------RIDPRSGVIETTGK 115
             R    + K+ A D D G N E+ YS   V  +  LH         R   R  ++   G 
Sbjct: 1113 QRAGSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQRGT 1172

Query: 116  LIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
             +    +S TV A D G       Q  V V  +   N  +P F ++ Y   +SE A+  +
Sbjct: 1173 AV----FSFTVIAVDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAANLT 1227

Query: 173  TVATITVSRLASG 185
             V  ++ S +  G
Sbjct: 1228 QVLRVSASDVDEG 1240



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 67/158 (42%), Gaps = 29/158 (18%)

Query: 30  GTAA---SVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEAT 76
           GTAA   S   SL + +NDIND+ P               PP    +G        + AT
Sbjct: 449 GTAARARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSAT 500

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTG 132
           D D G+NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G
Sbjct: 501 DGDSGLNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQG 558

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
                +  ++ V +   N   P F Q   Y V+V E A
Sbjct: 559 VHPKFSYAQLVVTLLDVNDEKPAFSQPEGYAVSVVENA 596



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYAIVQQMPRGNH-FGIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 16/181 (8%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAG 64
            ++LDR+      F   V A +    A +   ++ V ++D+NDN P     M      +  
Sbjct: 2320 QSLDRE--TKAHFVLMVTATDSGSPALTGTGTINVIIDDVNDNVPTFASKMYFTTIPEDA 2377

Query: 65   EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
                 ++ + A+D D   NA I          G  +F I+P +G I T+  L     E Y
Sbjct: 2378 PTGTDVLLVNASDADASTNAVIRII------GGNSQFTINPSTGQIITSALLDRETKENY 2431

Query: 123  SITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            ++ V ++D G     SS T V V+V    N   P FQ + Y  ++       S V  +TV
Sbjct: 2432 TLVVVSSDAGSPEPLSSSTSVLVTVT-DVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTV 2490

Query: 180  S 180
            +
Sbjct: 2491 T 2491


>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
            2 [Acyrthosiphon pisum]
          Length = 4147

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 21/188 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--------PMIPPIQ 60
            LDR+  +       V  REK        V +T  + DINDNAP           +    Q
Sbjct: 3146 LDRELQSRYNLEAHVQDREKSEWECISKVEIT--MLDINDNAPLFISNNNNTASLSEDAQ 3203

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            I        ++K+ ATD D+G+N ++ +S+    ++  + F I   SG++    KL    
Sbjct: 3204 IGT-----IVIKMHATDADIGLNRKLKFSL---QDSADNHFIISSDSGIVTLAKKLDRET 3255

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E Y+I+V+A D G     ++ ++ V V   N   P+F Q TY   VSE A I++ V  +
Sbjct: 3256 CETYNISVKAIDQGSPPLSSLTQLHVIVLDVNDNPPIFVQRTYYATVSEIAPIDTEVTRV 3315

Query: 178  TVSRLASG 185
              + L SG
Sbjct: 3316 LATSLDSG 3323



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           S+ + L D+NDNAP     +  + I +       ++K++ +D D G NA+++  I   + 
Sbjct: 363 SIHIELADVNDNAPVFERELYEVNIAETAPVNSPVIKLKVSDKDEGKNAQVSLEIVGGNE 422

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSV-VPGPNT 150
            G  +FRI+ R+G++ T   L A  +  Y++TV A D G  G   Q+  +V + V   N 
Sbjct: 423 GG--EFRINKRTGMLYTAVVLDAEHRSSYTLTVSAIDQGNAGSRKQSAAKVKIFVVDAND 480

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P+F++   +V+++E     ++V  I+     SG
Sbjct: 481 NDPLFEKYLMEVSINENEPAGTSVVKISARDKDSG 515



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEI 86
            G +A V VS+ V   D+ND AP         I   E+      I+++ ATDND  +N  I
Sbjct: 2339 GVSAEVLVSIMVT--DVNDCAPEFYQ-DSYNISISESASFGSFILRVTATDNDTDINRVI 2395

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
             YSI          F ID + G I     L    +  + + ++ATDTG     T   + +
Sbjct: 2396 KYSIKKDEENSTDYFHIDEKEGSIYLKQSLDHETRPFHHVVLEATDTGLPPLSTTTHLWI 2455

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N  +P F+Q++Y   +SE A     V  +T +
Sbjct: 2456 TVLDVNDNAPKFEQSSYSCWLSEDAERGQFVTMVTAT 2492



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 25/160 (15%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLGVNAEITYS 89
            L V + D+NDN       PPI +Q               ++ ++ AT  D G NAE+ YS
Sbjct: 3279 LHVIVLDVNDN-------PPIFVQRTYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYS 3331

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQTIVEVSV 144
            I        +KF I+  +GVI +  +++  E+   Y +T+QATD G    S+Q +V +++
Sbjct: 3332 I--AGGNEHNKFSINSETGVI-SVFEMLDYERVRDYLLTIQATDLGEPPLSNQAMVNITI 3388

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +   N  +P+F Q  Y   + E   +   V  ++ + L S
Sbjct: 3389 LDA-NDNAPIFGQLAYTTQIDEDVHVGEVVIKVSATDLDS 3427



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 33   ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSI 90
            A VP+++T+   DINDNAP    +P   I + +A++   + K+ A D D G NA + Y +
Sbjct: 2128 AHVPINVTIL--DINDNAPMFVNLPYYAIVSIDAKKDDLVTKVHAVDLDQGENAAVRYEL 2185

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAG-----EQYSITVQATDTGGKSSQTIVEVSVV 145
               +      FR+   +G I     L +       ++ +TV A D G +S  T VEV+ V
Sbjct: 2186 ---TKGPGELFRVSRSTGEIFLRHNLESQNNGRISEFKLTVAAFDGGQQSYSTEVEVN-V 2241

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   PVF +  Y V+V E   +
Sbjct: 2242 KVMDRSMPVFDKQFYSVSVPENIDL 2266



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 24/191 (12%)

Query: 2    LVVSKENLDRDPPNPGK--FRFQV---------IAREKQGTAASVPVSLTVNLNDINDNA 50
            +V++ E+++ + P   K  +RF++         + +E   T+A+     T  ++++ D  
Sbjct: 1259 VVIAVEDVNDNAPEMLKKAYRFKIPETQPVQEPLVQENSTTSATAE---TAEIDELLDKK 1315

Query: 51   PRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
            P      P  I AG A   + +I A+D D G NA +TY++          F ++P +GVI
Sbjct: 1316 P-WTCFGPNDI-AGPA---LFRIVASDKDSGDNARLTYTMKAAQGYD-DIFSVEPDTGVI 1369

Query: 111  ETTGKLIAGEQYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +       + +S  ++ATD G  +    ++ IVEV  +P  +   P  Q     V+++E
Sbjct: 1370 YSDHSFRGNQDFSFYIRATDNGSPNMSAVAKVIVEVLKIPENSKHVPEIQNPNQKVDITE 1429

Query: 167  GASINSTVATI 177
              ++   VA I
Sbjct: 1430 SDTVGYIVALI 1440



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 11/200 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR--LPMIPPIQ 60
            ++S+  LDR+      +   V+A + QG      + + V ++D NDN+PR  LP      
Sbjct: 2626 IISRMPLDRE--EVSLYELNVLACD-QGARCGYTL-VRVRVSDENDNSPRFLLPEYKTCI 2681

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR-IDPRSG--VIETTGKLI 117
              +       + ++A D+D   + +ITYSI  +  + + K   ++  +G  V+  T + +
Sbjct: 2682 HSSLPVNTGFLTVKAVDDDQEPSGQITYSINDIEPSDITKLMTVNKYTGALVLLKTVESL 2741

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                Y   ++ATD G    Q+ V + + V  P    PVF Q     N++E + I + V T
Sbjct: 2742 KNNVYQFFIRATDNGSPPRQSDVPIELFVLSPEDLPPVFLQEDQKFNLTENSPIGTIVTT 2801

Query: 177  IT-VSRLASGCAIMNKEENS 195
            +  VS++ +   I   EE +
Sbjct: 2802 VKLVSQVETKYKITASEETA 2821



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 15/149 (10%)

Query: 41   VNLNDINDNAP---RLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + + D NDNAP   +L     I   +  GE    ++K+ ATD D  +N +I Y++  V  
Sbjct: 3386 ITILDANDNAPIFGQLAYTTQIDEDVHVGEV---VIKVSATDLDSELNGKIRYAL--VKG 3440

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
                +F ID  +G I T  K +  EQ   Y++ ++ATD+G     +   V V V   N  
Sbjct: 3441 DHHQQFAIDSFTGNI-TVAKPLDREQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDN 3499

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P+F Q+ Y   V E       V  ++V+
Sbjct: 3500 PPLFSQHNYSAFVHEDKKPGWIVCQLSVT 3528



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 15/179 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTV--NLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIE 74
           + F V AR++     S P S  V  N+  +N  +P + +  +P +  ++      I+K+ 
Sbjct: 233 YDFVVEARDRGIRGRSKPSSAKVKFNIQQVNIYSPDIFIQHLPHVVEESNCDIYAIIKV- 291

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSG-----VIETTGKLIAGEQYSITVQ 127
            TD D GVN  I  S+  V       FRI     SG     V+    +  A + Y+++++
Sbjct: 292 -TDRDSGVNG-IIRSLEIVDGDPDGHFRIKETGHSGEYNIVVLNMLDRETAPKGYNLSLR 349

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D+G     T   + + +   N  +PVF++  Y+VN++E A +NS V  + VS    G
Sbjct: 350 AVDSGTPERDTYRSIHIELADVNDNAPVFERELYEVNIAETAPVNSPVIKLKVSDKDEG 408



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 38  SLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +L V + D ND +P   P++    I +       ++K+ A D D+G+N EI YS    +N
Sbjct: 149 ALVVTVLDTNDLSPLFYPVVYEKTIPEDTPLHSSVLKVSAEDADIGMNGEIYYSFKEKTN 208

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
               +F + PR+GVI  T  L   ++  Y   V+A D G
Sbjct: 209 ----QFAMHPRTGVITITRSLRFEDRRSYDFVVEARDRG 243



 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 15/149 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D+NDNAP++        +  E  R    I KI A D D G N  I Y    +  
Sbjct: 833 LKVIILDVNDNAPKVDKRVS-SFRVSENARNGTVIFKINAQDPDQGENGRIVY----ILT 887

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK----SSQTIVEVSVVPGPN 149
           T    F +D  SG +  +G+L    Q  Y + V  +D   +     ++ ++ + +V   N
Sbjct: 888 TDTTHFSVDKTSGNLYVSGRLDRERQELYELKVTVSDCAPEPWTLHTEALIRI-IVDDVN 946

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F    Y V   E   I S VA +T
Sbjct: 947 DNAPEFLVQNYTVKALEDLPIGSVVAIVT 975



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 12/113 (10%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGE-ARRQIVKIEATDNDLGV 82
           A  ++ +AA V + +     D NDN P     +  + I   E A   +VKI A D D G 
Sbjct: 461 AGSRKQSAAKVKIFVV----DANDNDPLFEKYLMEVSINENEPAGTSVVKISARDKDSGE 516

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           N  I+YSI   +N     F ID  +G+I+TT  L       +Y + ++A+D G
Sbjct: 517 NGYISYSI---ANLKPVPFDIDHFTGLIKTTHLLDFETMRREYVLHIRASDWG 566



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 2/62 (3%)

Query: 120  EQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + Y++TV+ATD+  G S++ +V + +V   N  +P F Q++Y++++SE AS  S +  +T
Sbjct: 2325 QHYTLTVRATDSVSGVSAEVLVSI-MVTDVNDCAPEFYQDSYNISISESASFGSFILRVT 2383

Query: 179  VS 180
             +
Sbjct: 2384 AT 2385



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+ I A D DLG N ++ Y +    +  L  FRIDP +G +   G L     ++Y + V 
Sbjct: 761 ILAIRARDRDLGYNGKLVYGVSDGDDDSL--FRIDPETGDLNVVGYLDRETRDEYELNVT 818

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            +D G     T   + V +   N  +P   +      VSE A
Sbjct: 819 VSDLGKPQHTTWKLLKVIILDVNDNAPKVDKRVSSFRVSENA 860



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            I++++A DND G   E++YSI     + +  F I+  +G I +   L   E   Y + V 
Sbjct: 2588 IIRVQAIDNDTGPYGEVSYSIPSKKMSKI--FNINNITGEIISRMPLDREEVSLYELNVL 2645

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G +   T+V V  V   N  SP F    Y   +     +N+   T+
Sbjct: 2646 ACDQGARCGYTLVRVR-VSDENDNSPRFLLPEYKTCIHSSLPVNTGFLTV 2694



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 22/176 (12%)

Query: 23   VIAREKQG---------TAASVPVS----LTVNLNDINDNAPRLPM-IPPIQIQAGEAR- 67
            ++ REKQ          T +S P++    + V + D NDNAP         +I    A  
Sbjct: 2837 LLDREKQAFHILGVFAYTESSPPLTALTEVYVKVLDENDNAPEFDNDFYSARISETIAEG 2896

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
              +VK  A D D G N EI Y I   SN     F ID  SG I  +   +  E    Y  
Sbjct: 2897 TLVVKTRAIDLDEGKNGEIKYLISSKSNV---PFVIDQYSGSISVSVSNLDREVKSSYMF 2953

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             V A D+G  S  + V+V + +   N     F Q +Y  +V E +   + V  +T+
Sbjct: 2954 DVVAFDSGTPSFNSTVKVHISLVDYNDNPSRFSQTSYAASVEEDSLPGTVVVQLTL 3009


>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
            1 [Acyrthosiphon pisum]
 gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
            3 [Acyrthosiphon pisum]
          Length = 4140

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 21/188 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--------PMIPPIQ 60
            LDR+  +       V  REK        V +T  + DINDNAP           +    Q
Sbjct: 3139 LDRELQSRYNLEAHVQDREKSEWECISKVEIT--MLDINDNAPLFISNNNNTASLSEDAQ 3196

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            I        ++K+ ATD D+G+N ++ +S+    ++  + F I   SG++    KL    
Sbjct: 3197 IGT-----IVIKMHATDADIGLNRKLKFSL---QDSADNHFIISSDSGIVTLAKKLDRET 3248

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             E Y+I+V+A D G     ++ ++ V V   N   P+F Q TY   VSE A I++ V  +
Sbjct: 3249 CETYNISVKAIDQGSPPLSSLTQLHVIVLDVNDNPPIFVQRTYYATVSEIAPIDTEVTRV 3308

Query: 178  TVSRLASG 185
              + L SG
Sbjct: 3309 LATSLDSG 3316



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           S+ + L D+NDNAP     +  + I +       ++K++ +D D G NA+++  I   + 
Sbjct: 363 SIHIELADVNDNAPVFERELYEVNIAETAPVNSPVIKLKVSDKDEGKNAQVSLEIVGGNE 422

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSV-VPGPNT 150
            G  +FRI+ R+G++ T   L A  +  Y++TV A D G  G   Q+  +V + V   N 
Sbjct: 423 GG--EFRINKRTGMLYTAVVLDAEHRSSYTLTVSAIDQGNAGSRKQSAAKVKIFVVDAND 480

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P+F++   +V+++E     ++V  I+     SG
Sbjct: 481 NDPLFEKYLMEVSINENEPAGTSVVKISARDKDSG 515



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEI 86
            G +A V VS+ V   D+ND AP         I   E+      I+++ ATDND  +N  I
Sbjct: 2332 GVSAEVLVSIMVT--DVNDCAPEFYQ-DSYNISISESASFGSFILRVTATDNDTDINRVI 2388

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
             YSI          F ID + G I     L    +  + + ++ATDTG     T   + +
Sbjct: 2389 KYSIKKDEENSTDYFHIDEKEGSIYLKQSLDHETRPFHHVVLEATDTGLPPLSTTTHLWI 2448

Query: 145  -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V   N  +P F+Q++Y   +SE A     V  +T +
Sbjct: 2449 TVLDVNDNAPKFEQSSYSCWLSEDAERGQFVTMVTAT 2485



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 25/160 (15%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQ---------AGEARRQIVKIEATDNDLGVNAEITYS 89
            L V + D+NDN       PPI +Q               ++ ++ AT  D G NAE+ YS
Sbjct: 3272 LHVIVLDVNDN-------PPIFVQRTYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYS 3324

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQTIVEVSV 144
            I        +KF I+  +GVI +  +++  E+   Y +T+QATD G    S+Q +V +++
Sbjct: 3325 I--AGGNEHNKFSINSETGVI-SVFEMLDYERVRDYLLTIQATDLGEPPLSNQAMVNITI 3381

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            +   N  +P+F Q  Y   + E   +   V  ++ + L S
Sbjct: 3382 LDA-NDNAPIFGQLAYTTQIDEDVHVGEVVIKVSATDLDS 3420



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 33   ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSI 90
            A VP+++T+   DINDNAP    +P   I + +A++   + K+ A D D G NA + Y +
Sbjct: 2128 AHVPINVTIL--DINDNAPMFVNLPYYAIVSIDAKKDDLVTKVHAVDLDQGENAAVRYEL 2185

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAG-----EQYSITVQATDTGGKSSQTIVEVSVV 145
               +      FR+   +G I     L +       ++ +TV A D G +S  T VEV+ V
Sbjct: 2186 ---TKGPGELFRVSRSTGEIFLRHNLESQNNGRISEFKLTVAAFDGGQQSYSTEVEVN-V 2241

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASI 170
               +   PVF +  Y V+V E   +
Sbjct: 2242 KVMDRSMPVFDKQFYSVSVPENIDL 2266



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 24/191 (12%)

Query: 2    LVVSKENLDRDPPNPGK--FRFQV---------IAREKQGTAASVPVSLTVNLNDINDNA 50
            +V++ E+++ + P   K  +RF++         + +E   T+A+     T  ++++ D  
Sbjct: 1259 VVIAVEDVNDNAPEMLKKAYRFKIPETQPVQEPLVQENSTTSATAE---TAEIDELLDKK 1315

Query: 51   PRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
            P      P  I AG A   + +I A+D D G NA +TY++          F ++P +GVI
Sbjct: 1316 P-WTCFGPNDI-AGPA---LFRIVASDKDSGDNARLTYTMKAAQGYD-DIFSVEPDTGVI 1369

Query: 111  ETTGKLIAGEQYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             +       + +S  ++ATD G  +    ++ IVEV  +P  +   P  Q     V+++E
Sbjct: 1370 YSDHSFRGNQDFSFYIRATDNGSPNMSAVAKVIVEVLKIPENSKHVPEIQNPNQKVDITE 1429

Query: 167  GASINSTVATI 177
              ++   VA I
Sbjct: 1430 SDTVGYIVALI 1440



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 11/200 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR--LPMIPPIQ 60
            ++S+  LDR+      +   V+A + QG      + + V ++D NDN+PR  LP      
Sbjct: 2619 IISRMPLDRE--EVSLYELNVLACD-QGARCGYTL-VRVRVSDENDNSPRFLLPEYKTCI 2674

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR-IDPRSG--VIETTGKLI 117
              +       + ++A D+D   + +ITYSI  +  + + K   ++  +G  V+  T + +
Sbjct: 2675 HSSLPVNTGFLTVKAVDDDQEPSGQITYSINDIEPSDITKLMTVNKYTGALVLLKTVESL 2734

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
                Y   ++ATD G    Q+ V + + V  P    PVF Q     N++E + I + V T
Sbjct: 2735 KNNVYQFFIRATDNGSPPRQSDVPIELFVLSPEDLPPVFLQEDQKFNLTENSPIGTIVTT 2794

Query: 177  IT-VSRLASGCAIMNKEENS 195
            +  VS++ +   I   EE +
Sbjct: 2795 VKLVSQVETKYKITASEETA 2814



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 15/149 (10%)

Query: 41   VNLNDINDNAP---RLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + + D NDNAP   +L     I   +  GE    ++K+ ATD D  +N +I Y++  V  
Sbjct: 3379 ITILDANDNAPIFGQLAYTTQIDEDVHVGEV---VIKVSATDLDSELNGKIRYAL--VKG 3433

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
                +F ID  +G I T  K +  EQ   Y++ ++ATD+G     +   V V V   N  
Sbjct: 3434 DHHQQFAIDSFTGNI-TVAKPLDREQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDN 3492

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P+F Q+ Y   V E       V  ++V+
Sbjct: 3493 PPLFSQHNYSAFVHEDKKPGWIVCQLSVT 3521



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 6/99 (6%)

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT-GGKSSQTIVE 141
            ++ YSI  V+     +F ID  +G++     L   +   Y++TV+ATD+  G S++ +V 
Sbjct: 2283 KLIYSI--VAGNTFEEFAIDFNTGLLYAVDNLDYEQVQHYTLTVRATDSVSGVSAEVLVS 2340

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            + +V   N  +P F Q++Y++++SE AS  S +  +T +
Sbjct: 2341 I-MVTDVNDCAPEFYQDSYNISISESASFGSFILRVTAT 2378



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 15/179 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTV--NLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIE 74
           + F V AR++     S P S  V  N+  +N  +P + +  +P +  ++      I+K+ 
Sbjct: 233 YDFVVEARDRGIRGRSKPSSAKVKFNIQQVNIYSPDIFIQHLPHVVEESNCDIYAIIKV- 291

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSG-----VIETTGKLIAGEQYSITVQ 127
            TD D GVN  I  S+  V       FRI     SG     V+    +  A + Y+++++
Sbjct: 292 -TDRDSGVNG-IIRSLEIVDGDPDGHFRIKETGHSGEYNIVVLNMLDRETAPKGYNLSLR 349

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D+G     T   + + +   N  +PVF++  Y+VN++E A +NS V  + VS    G
Sbjct: 350 AVDSGTPERDTYRSIHIELADVNDNAPVFERELYEVNIAETAPVNSPVIKLKVSDKDEG 408



 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 38  SLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           +L V + D ND +P   P++    I +       ++K+ A D D+G+N EI YS    +N
Sbjct: 149 ALVVTVLDTNDLSPLFYPVVYEKTIPEDTPLHSSVLKVSAEDADIGMNGEIYYSFKEKTN 208

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
               +F + PR+GVI  T  L   ++  Y   V+A D G
Sbjct: 209 ----QFAMHPRTGVITITRSLRFEDRRSYDFVVEARDRG 243



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 15/149 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D+NDNAP++        +  E  R    I KI A D D G N  I Y    +  
Sbjct: 833 LKVIILDVNDNAPKVDKRVS-SFRVSENARNGTVIFKINAQDPDQGENGRIVY----ILT 887

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK----SSQTIVEVSVVPGPN 149
           T    F +D  SG +  +G+L    Q  Y + V  +D   +     ++ ++ + +V   N
Sbjct: 888 TDTTHFSVDKTSGNLYVSGRLDRERQELYELKVTVSDCAPEPWTLHTEALIRI-IVDDVN 946

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F    Y V   E   I S VA +T
Sbjct: 947 DNAPEFLVQNYTVKALEDLPIGSVVAIVT 975



 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 12/113 (10%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGE-ARRQIVKIEATDNDLGV 82
           A  ++ +AA V + +     D NDN P     +  + I   E A   +VKI A D D G 
Sbjct: 461 AGSRKQSAAKVKIFVV----DANDNDPLFEKYLMEVSINENEPAGTSVVKISARDKDSGE 516

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           N  I+YSI   +N     F ID  +G+I+TT  L       +Y + ++A+D G
Sbjct: 517 NGYISYSI---ANLKPVPFDIDHFTGLIKTTHLLDFETMRREYVLHIRASDWG 566



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+ I A D DLG N ++ Y +    +  L  FRIDP +G +   G L     ++Y + V 
Sbjct: 761 ILAIRARDRDLGYNGKLVYGVSDGDDDSL--FRIDPETGDLNVVGYLDRETRDEYELNVT 818

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            +D G     T   + V +   N  +P   +      VSE A
Sbjct: 819 VSDLGKPQHTTWKLLKVIILDVNDNAPKVDKRVSSFRVSENA 860



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            I++++A DND G   E++YSI     + +  F I+  +G I +   L   E   Y + V 
Sbjct: 2581 IIRVQAIDNDTGPYGEVSYSIPSKKMSKI--FNINNITGEIISRMPLDREEVSLYELNVL 2638

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A D G +   T+V V  V   N  SP F    Y   +     +N+   T+
Sbjct: 2639 ACDQGARCGYTLVRVR-VSDENDNSPRFLLPEYKTCIHSSLPVNTGFLTV 2687



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 22/176 (12%)

Query: 23   VIAREKQG---------TAASVPVS----LTVNLNDINDNAPRLPM-IPPIQIQAGEAR- 67
            ++ REKQ          T +S P++    + V + D NDNAP         +I    A  
Sbjct: 2830 LLDREKQAFHILGVFAYTESSPPLTALTEVYVKVLDENDNAPEFDNDFYSARISETIAEG 2889

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
              +VK  A D D G N EI Y I   SN     F ID  SG I  +   +  E    Y  
Sbjct: 2890 TLVVKTRAIDLDEGKNGEIKYLISSKSNV---PFVIDQYSGSISVSVSNLDREVKSSYMF 2946

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             V A D+G  S  + V+V + +   N     F Q +Y  +V E +   + V  +T+
Sbjct: 2947 DVVAFDSGTPSFNSTVKVHISLVDYNDNPSRFSQTSYAASVEEDSLPGTVVVQLTL 3002


>gi|444732649|gb|ELW72931.1| Protocadherin-11 X-linked [Tupaia chinensis]
          Length = 907

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I +   E      Q+ KI ATD D G NAE++Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PSISLSVPENNFPGAQLTKISATDADSGRNAEVSYLL----- 505

Query: 96  TGLH---KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
            G+    +F +D R+G++    KL     E+YS TV A D G     T   V + V   N
Sbjct: 506 -GIDAPSEFNLDRRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLITNATVFLTVLDQN 564

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             SPVF  N Y+  V E    + TV  ITV+
Sbjct: 565 DNSPVFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   ++PP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VVPPSNYSF 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAE+ YSI   +  GL  F ID  +G I    K I
Sbjct: 683 ELVLPSTNPGTVVFQVVAVDNDTGINAELRYSIVGGNTNGL--FTIDQTTGNITLKEKCI 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
           + +   + + V+A D G   S
Sbjct: 741 SADLGLHRLVVKAKDLGQPDS 761



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 17/191 (8%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P       I++
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFTE-KEIEV 256

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLI 117
              E       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     L 
Sbjct: 257 SIPENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITIKEPLD 316

Query: 118 AGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + + V A+D G   ++ +V V+V      VP  + R  +   N   V +SE A 
Sbjct: 317 REESPSHKLLVLASDGGSTPARAMVLVNVTDINDNVPSIDIRYIINPING-TVVLSENAP 375

Query: 170 INSTVATITVS 180
           +N+ VA ITV+
Sbjct: 376 LNTKVALITVT 386



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ + + D NDN+P          
Sbjct: 521 ILTAVKKLDREKQE--KYSFTVLAKDNGIPPLITNATVFLTVLDQNDNSPVFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++     F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSILDVND----DFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 33/196 (16%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPP 58
           L+  KE LDR+  +P   +  V+A +   T A   V   VN+ DINDN P +    +I P
Sbjct: 308 LITIKEPLDREE-SPSH-KLLVLASDGGSTPARAMV--LVNVTDINDNVPSIDIRYIINP 363

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP---RSGVI 110
           I       +      ++  I  TD D   N  +T    H        FR+ P      ++
Sbjct: 364 INGTVVLSENAPLNTKVALITVTDKDADHNGRVTCFTDHEV-----PFRLRPVFSNQFLL 418

Query: 111 ETTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           ET   L   + ++Y+I + A D G     +S+  +V+V      N  +PVF Q +  ++V
Sbjct: 419 ETAAFLDYESTKEYAIKLLAADAGKPPLNQSAMLLVKVK---DENDNAPVFTQPSISLSV 475

Query: 165 SE----GASINSTVAT 176
            E    GA +    AT
Sbjct: 476 PENNFPGAQLTKISAT 491


>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
          Length = 4539

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 10/162 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR--LPMIPPIQIQAGEA 66
            LDR+  +   +  +V+A ++        V + V + D+NDN P+   P+  P+  +  +A
Sbjct: 1075 LDRE--SQAHYWLRVVACDRGTVPLCSTVEVLVEVEDLNDNVPQTEFPVYEPMVPENSDA 1132

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               +V +EA D D   N ++TYSI      G   F ID +SG+I TT + +  EQ   + 
Sbjct: 1133 GHSVVNLEARDADDSKNNQLTYSIVSGDPQGF--FSIDEKSGLITTTSRRLDREQQAEHI 1190

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
            + V+ +D G  S  +   V V V   N  +P F ++ Y V V
Sbjct: 1191 LEVRISDNGVPSLSSTTRVVVKVTDVNDLAPQFTESVYRVRV 1232



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR------LPMIPPIQIQ 62
            LDR+     ++   V A ++     S    L VN+ D NDN P       L  IP    +
Sbjct: 3164 LDREAV--AQYNISVYAYDQGTVRLSSAAHLIVNVLDENDNPPEFERSVYLESIP----E 3217

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG-- 119
                   ++++ AT  D G+NA++TY+I   +    L  F +DP SG++     L     
Sbjct: 3218 DAAVGSSLLQVTATSLDTGINAQMTYTISEDNALLNLETFSMDPESGILRHQKPLDYETV 3277

Query: 120  EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +YS+TV ATD G         +++ V   N ++P+F Q+ Y + + E   +  ++  ++
Sbjct: 3278 REYSLTVLATDGGEPPLTASATLNINVTDCNDQAPIFDQSVYRLTIPENTRVGQSILKVS 3337

Query: 179  VSRLASG 185
             + L S 
Sbjct: 3338 ATDLDSA 3344



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 9/168 (5%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATD 77
            R  + A  +   A      +TV + DINDN P           ++  E   Q++++EA D
Sbjct: 2758 RLTIRAETETSPALVAETVVTVKIMDINDNPPVFESQHYAVTIMENAEIGSQVLRVEAHD 2817

Query: 78   NDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
             D G N++++YS Y + +  +   F +D  SG I T   L   A + Y  +V A+D G  
Sbjct: 2818 ADTGANSDLSYS-YLIEDAQISNIFALDAESGQISTLVSLDREARDTYEFSVTASDRGSP 2876

Query: 135  --SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS T+V++SV    N   P F+Q+ Y+  V+E A   + +  +T S
Sbjct: 2877 PLSSVTLVKISVTDF-NDNPPQFEQDEYEGAVNEDALPGTIILMVTSS 2923



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 18/123 (14%)

Query: 39   LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
            + V + D+ND AP         R+P +P            + ++ A D D G NA+I +S
Sbjct: 1209 VVVKVTDVNDLAPQFTESVYRVRVPAMPQPTDDV-----DLFRVVAFDLDEGANADIDFS 1263

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPG 147
            + ++ N   ++F I P++G+I ++ +  AG QY ITVQA D G   K +Q  V  SVV  
Sbjct: 1264 LKNMKNQ--NRFSIHPKTGMISSSKEFEAGTQYDITVQAVDNGDPQKVNQVRVFFSVVDR 1321

Query: 148  PNT 150
            P T
Sbjct: 1322 PVT 1324



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 9/160 (5%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-QIV-KIEATDNDL 80
            V AR+   +     V L V + D NDN P     P + I + +A R Q+V +++A D D+
Sbjct: 2025 VEARDSSPSPRVAHVLLRVRVIDTNDNFPMFVNQPYMAIVSLDATRGQVVYQVKAIDRDI 2084

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTGG--KSSQ 137
            G N ++ YSI      GL   ++D    +++    L    +Q+ +TV+A D G    S Q
Sbjct: 2085 GENGQVAYSIIE-GAAGLFSMQVDSGHIILDADLTLEHQNQQHKLTVEAHDRGAVPLSVQ 2143

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            T V + V+   +  +P F Q  Y V++SE   I S   TI
Sbjct: 2144 TTVSILVM---SRATPSFDQPFYQVDISESLPIGSVAVTI 2180



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 13/185 (7%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K +LDR+      +   V A +  G      V + V   D+NDNAP           +  
Sbjct: 3060 KNSLDRE--TAPDYTLTVTAVDGGGLFCQSEVYIVVT--DVNDNAPVFTQTEYTVGISEH 3115

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
            A++   ++++ A+D DLG+  ++ Y++    N GL  F++D  SG++   G+L   A  Q
Sbjct: 3116 AQKNTLLMRVSASDLDLGLYRKVNYALE--DNGGL--FKMDQESGIVSLNGELDREAVAQ 3171

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            Y+I+V A D G     +   + V V   N   P F+++ Y  ++ E A++ S++  +T +
Sbjct: 3172 YNISVYAYDQGTVRLSSAAHLIVNVLDENDNPPEFERSVYLESIPEDAAVGSSLLQVTAT 3231

Query: 181  RLASG 185
             L +G
Sbjct: 3232 SLDTG 3236



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 11/182 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRL--PMIPP 58
            ++ ++E LDR+  +  +    V+    QGT +   ++ + + +ND ND+ P      +  
Sbjct: 1487 VITTRERLDREAASHHQL---VVMVRDQGTPSKRSLARVVIVVNDHNDHHPEFVTSEVEG 1543

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
                + E   Q++ + A D D G NA++ YSI  VS      F +DP  GV+     L  
Sbjct: 1544 RVYGSAEIGTQVLTVLAVDRDHGHNAQLKYSI--VSGNIGTAFSMDPSLGVLSVAKPLLP 1601

Query: 117  IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            +   +Y + V+A D G  S  +   V+V V   +  +P F  + Y V ++E     S VA
Sbjct: 1602 LGHNRYDLQVRAADGGAPSLSSTASVTVFVTTASNAAPRFHDDEYTVEIAENLPEMSFVA 1661

Query: 176  TI 177
            +I
Sbjct: 1662 SI 1663



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 39  LTVNLNDINDNAPRL-PMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D+NDNAP+   MI  + I    +  R IV ++A D+D G NA + YSI  +S+T
Sbjct: 782 LDVRVIDVNDNAPQFQKMIYNVTIPENIDVNRTIVSVKAYDDDEGTNARVMYSI--LSDT 839

Query: 97  GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK---SSQTIVEVSVVPGPNTR 151
               F I P SGVI+   +L       Y + V A+D   +   SS  +V +S+    N  
Sbjct: 840 --KDFTISPDSGVIKVNQQLDRETIPWYELQVVASDGALEKPLSSTVLVSISLA-DINDN 896

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
            P F   +Y + + E   +   + T+T + L  G   M
Sbjct: 897 PPQFFPESYSIRIREDLPVGVVILTLTANDLDLGADGM 934



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 22/199 (11%)

Query: 1    YLVVSKENLDR---DPPNPGKFRFQVIAREKQGTAASVPVSLT------------VNLND 45
            Y +VS+E LD    D      F  + + REK      VPV+ T            VN+ D
Sbjct: 2513 YSIVSEEALDLFWIDETTGEIFTLEALDREKHPQHL-VPVAATDGGGRMGYVTVIVNVAD 2571

Query: 46   INDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FR 102
              D+ P+  +           E    I+K+EA+D+DLG N ++ Y++     T   +   
Sbjct: 2572 QGDSEPQFKLQEYKANVFADAEIGSVILKVEASDDDLGPNGDLVYALVDSGITPASEVLA 2631

Query: 103  IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
            IDP SG I    +L + E     + V+A D G     + V V++ V   + + P F+ N 
Sbjct: 2632 IDPVSGEISVKERLASREHQLLQLFVRAQDQGSPPMHSDVPVAIYVIAEDDQPPYFEDNQ 2691

Query: 160  YDVNVSEGASINSTVATIT 178
                + E   I S +AT+T
Sbjct: 2692 PSYFIYENQEIGSIIATVT 2710



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 13/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
            V +K+ LD +  +  +  F VIA +      S  V + V + D+NDN PR    P  ++ 
Sbjct: 2327 VFTKQRLDHE--HYDQLSFLVIATDHGIPPLSSEVRVRVVITDMNDNPPRFDH-PAYEVA 2383

Query: 62   --QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLI 117
                 E  + +  + A+D+D      +TYSI  V       F +D  SGV+  +   K  
Sbjct: 2384 ISDLAERGQFVTSVMASDDDASDVGRLTYSI--VGGNTKQTFMLDEFSGVLSLSNLRKPS 2441

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              E+Y + +  TD G  ++   V +S V   N   PVF + +YD+ ++E    ++ VA +
Sbjct: 2442 LDERYLLNISVTD-GVFTNFATVHIS-VDNSNLHDPVFLE-SYDIYIAENLPSDTFVAAV 2498

Query: 178  TVS 180
            + S
Sbjct: 2499 SAS 2501



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 15/172 (8%)

Query: 23  VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA-RRQIVKIEATDND 79
           VIA + +   ASV V  TV + D NDN P       P + +Q G A    + ++ A D D
Sbjct: 402 VIAAQHRRHTASVNV--TVLITDCNDNTPAFNSTAWPEVSVQEGAAIGSSVYQVHAMDAD 459

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--- 133
           L  N +++YS+   SN     F ID  +G I+T   L        YS+ V+A+D G    
Sbjct: 460 LADNGQVSYSL---SNVNSVPFTIDHFTGEIKTKQVLDFETMRRVYSLVVRASDWGSPFR 516

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           + S++I++V  +   N   P F++      +S  A + + +  ++     +G
Sbjct: 517 RESESILKVR-LQDQNDNKPQFEKEDCSGYLSREAPVGTELLLVSAIDFDAG 567



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 20/192 (10%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L V+K+ LDR+     KF +++      G A      + V++ D NDNAP        +I
Sbjct: 2954 LYVNKQ-LDRE----RKFWYELTLVASDG-AHVTSTQVFVSILDANDNAPVCEQASYQKI 3007

Query: 62   --QAGEARRQIVKIEATDNDLG--VNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGK 115
              +  +    ++++ A+D D     N+ I + +      G H   F ++ R+G+I     
Sbjct: 3008 ISEDVDTGSFLLRVSASDADEKGTRNSRIKFLL-----DGNHGNVFHMNERTGIISIKNS 3062

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            L       Y++TV A D GG   Q+ V + VV   N  +PVF Q  Y V +SE A  N+ 
Sbjct: 3063 LDRETAPDYTLTVTAVDGGGLFCQSEVYI-VVTDVNDNAPVFTQTEYTVGISEHAQKNTL 3121

Query: 174  VATITVSRLASG 185
            +  ++ S L  G
Sbjct: 3122 LMRVSASDLDLG 3133



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)

Query: 13   PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK 72
            P    ++  QV A +    + S   S+TV +   ++ APR        ++  E   ++  
Sbjct: 1601 PLGHNRYDLQVRAADGGAPSLSSTASVTVFVTTASNAAPRF-HDDEYTVEIAENLPEMSF 1659

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + +   D    + + Y I  +    L KF I+P SGVI +  +L     E +++T++AT+
Sbjct: 1660 VASIQAD--SQSSVVYDI--IRGNELGKFGINPSSGVIYSRDELDYEQNEFFNLTIKATN 1715

Query: 131  TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                 S T+V V VV   N  +PVF  + Y  NVSE +   S V
Sbjct: 1716 MARAWSSTLVLVHVV-DENDNAPVFVMHAYSGNVSEASPEGSVV 1758



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)

Query: 19  FRFQVIAREK-----QGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIV 71
           +  QV+A+++      G  A    SLT+ + ++N  +P  +L  +P ++ + G+      
Sbjct: 185 YELQVLAQDRGPSLGSGQKAPSRASLTIRVTEVNFFSPQIKLQQLPAVE-EHGQVGTVYA 243

Query: 72  KIEATDNDLGVNAEI-TYSIYHVSNTGLHKFRI-DPRSGVIETTGKLIAGE----QYSIT 125
            +   D D G N EI +  I      G+ + ++ DP         K++  +    ++++T
Sbjct: 244 ILYVNDEDYGDNGEILSMEIVAGDPEGIFELKVTDPNKEFALQVAKILEEDSSPVEFNLT 303

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           V+A+D G     T  EV V +   N   PVF+ + Y V+V E
Sbjct: 304 VEASDRGQPPRSTQKEVYVKLWDKNQHMPVFEHDEYSVSVEE 345



 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            +  + A+D D G    ++YSI  VS   L  F ID  +G I T   L   +  Q+ + V 
Sbjct: 2495 VAAVSASDEDRGDYGSVSYSI--VSEEALDLFWIDETTGEIFTLEALDREKHPQHLVPVA 2552

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            ATD GG+     V V+V    ++  P F+   Y  NV   A I S +  +  S
Sbjct: 2553 ATDGGGRMGYVTVIVNVADQGDSE-PQFKLQEYKANVFADAEIGSVILKVEAS 2604



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 28/195 (14%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-----------L 53
            +K  LD +     +F  QV        +A     +TV++ DIND+ P+           L
Sbjct: 1805 TKVTLDHEVAAVYEFSVQVQDSGVPSQSAMTAAQVTVHVMDINDSPPQFSEPEYSVRLLL 1864

Query: 54   PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            P  P + +           + A D D  VN E+ YSI       L  F +DP  G +   
Sbjct: 1865 PTYPNVLVST---------VVAHDADTDVNTELLYSI--TEGNDLEHFALDPTEGTLRVV 1913

Query: 114  GKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  + Y +T++ TD G   S   V+VSV    ++    F  + Y   + E ++  S 
Sbjct: 1914 DSREMLDSYLLTIRVTD-GLYDSTAQVKVSVDFTEDS-GLSFSDHEYYAEIKENSTAVSR 1971

Query: 174  VATITVSRLASGCAI 188
            VA +     ASG A+
Sbjct: 1972 VAIVQ----ASGHAL 1982



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 16/125 (12%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIPPIQIQAGEARRQI 70
            ++   V+A +      +   +L +N+ D ND AP       RL +  P   + G++   I
Sbjct: 3279 EYSLTVLATDGGEPPLTASATLNINVTDCNDQAPIFDQSVYRLTI--PENTRVGQS---I 3333

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
            +K+ ATD D    A I+Y+I   S   L +F ++   GVI     L   +   YS+ + A
Sbjct: 3334 LKVSATDLDSAAYAVISYAI--GSGDDLGQFEVNAPDGVISVAQPLDRESLSHYSLVILA 3391

Query: 129  TDTGG 133
            TDTG 
Sbjct: 3392 TDTGA 3396



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEIT 87
            T +    ++ +NL D ND+ PR        +   E       I+ +  TD D GVNA   
Sbjct: 2244 TGSFAEAAVHINLQDENDHPPRFTS-NAYTVTVSEVVAIGTPIITVTTTDRDSGVNALAH 2302

Query: 88   YSIYHVSNTGL--HKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG--GKSSQTIVE 141
            Y +   +  G   + F ID + G + T  +L     +Q S  V ATD G    SS+  V 
Sbjct: 2303 YELREEAEGGAMSNHFHIDTQQGTVFTKQRLDHEHYDQLSFLVIATDHGIPPLSSEVRVR 2362

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V V+   N   P F    Y+V +S+ A     V ++  S
Sbjct: 2363 V-VITDMNDNPPRFDHPAYEVAISDLAERGQFVTSVMAS 2400



 Score = 38.9 bits (89), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
            LDR+  +   +   ++A +   T  +   +L +NL D+ND  PR  M     +  +    
Sbjct: 3377 LDRE--SLSHYSLVILATDTGATVLTGTATLFINLTDVNDCPPRFTMDNFTAVVQEDLPL 3434

Query: 67   RRQIVKIEATDNDLGVN-AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
               I++++ TD+DL  N    T+ I  V     + FRID    +I T  +     Q  ++
Sbjct: 3435 ATSILQMKVTDDDLDPNRGPFTFDI--VDGNQDNSFRIDGNHWLI-TAAQFNRQIQDTFN 3491

Query: 124  ITVQATDTGGKSSQTIVEVSV 144
            +T++A D G  +  T  E+SV
Sbjct: 3492 LTIRAFDHGSPTLYTDTEISV 3512



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 17/170 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTV----NLNDINDNAPR-LPMIPPIQIQAG-EARRQIVK 72
            +  QV+A +    A   P+S TV    +L DINDN P+  P    I+I+        I+ 
Sbjct: 865  YELQVVASDG---ALEKPLSSTVLVSISLADINDNPPQFFPESYSIRIREDLPVGVVILT 921

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + A D DLG +  + Y++    +    KF ID  +G I     L   + + Y+I  +A D
Sbjct: 922  LTANDLDLGADGMVRYALIEGMDD---KFEIDRLTGTIRIVNPLDFESKQLYNIIARARD 978

Query: 131  --TGGKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              T   S++  + + +V    N   PVF+   +   V E    N++V  +
Sbjct: 979  RSTPALSTKCSISIEIVDVNENLYPPVFKDFVFQGRVKENQPPNTSVMRL 1028



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 32/156 (20%)

Query: 25   AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI---QIQAGEARR------QIVKIEA 75
            AR++   A S   S+++ + D+N+N     + PP+    +  G  +        ++++ A
Sbjct: 976  ARDRSTPALSTKCSISIEIVDVNEN-----LYPPVFKDFVFQGRVKENQPPNTSVMRLVA 1030

Query: 76   TDNDLGVN-------AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            TD D   N       ++I Y+I     +G+ +F ID  SGVI T G L    Q  Y + V
Sbjct: 1031 TDADTLQNPLASRADSQIVYTI--TGGSGMRRFTID-NSGVIRTHGILDRESQAHYWLRV 1087

Query: 127  QATDTG----GKSSQTIVEVSVVPG--PNTRSPVFQ 156
             A D G      + + +VEV  +    P T  PV++
Sbjct: 1088 VACDRGTVPLCSTVEVLVEVEDLNDNVPQTEFPVYE 1123



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 33/188 (17%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+  +   + F V A ++     S    + +++ D NDN P+       Q +   A 
Sbjct: 2855 SLDREARD--TYEFSVTASDRGSPPLSSVTLVKISVTDFNDNPPQFE-----QDEYEGAV 2907

Query: 68   RQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
             +       I+ + ++D DL  N +++YSI      G    R          TG+L   +
Sbjct: 2908 NEDALPGTIILMVTSSDADLSPNNQVSYSIREGDPLGQFNVR---------HTGELYVNK 2958

Query: 121  Q--------YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            Q        Y +T+ A+D G   + T V VS++   N  +PV +Q +Y   +SE     S
Sbjct: 2959 QLDRERKFWYELTLVASD-GAHVTSTQVFVSILDA-NDNAPVCEQASYQKIISEDVDTGS 3016

Query: 173  TVATITVS 180
             +  ++ S
Sbjct: 3017 FLLRVSAS 3024



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-Q 62
           S+  ++R+  +  +   +  A+++ G   +    + + + D ND +P   P    + I +
Sbjct: 68  SQSVINRERQDVYRLSVKATAKQRNGPNWTTRTDVILRVLDANDLSPLFYPRSYDVSISE 127

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
                  +V++ A+D D+G+N E+ +S    ++     F I P SG++  T  L   +Q 
Sbjct: 128 DTTLHSSVVQVTASDADVGINGEVYFSFLQRTDA----FAIHPTSGLVTLTRPLSFIDQN 183

Query: 122 -YSITVQATDTG 132
            Y + V A D G
Sbjct: 184 IYELQVLAQDRG 195


>gi|198416732|ref|XP_002120984.1| PREDICTED: similar to dachsous CG17941-PA, partial [Ciona
           intestinalis]
          Length = 590

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 11/176 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV  KE LDR+      +   + A +      S   S T+ + D+NDN P+    ++  
Sbjct: 414 YLVCVKERLDRE--TQSSYHITLTAVDFGSPPQSTSTSFTLTVEDVNDNPPKFASDLVEV 471

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
              Q       + ++  TD D+GVNAE+TY +     +      I+P SG+I T+  L  
Sbjct: 472 ELSQNSFLGTFVTQVSTTDADIGVNAEVTYRLDDSPQSAW--LDINPDSGLITTSRSLDS 529

Query: 117 IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
           ++G  +++ V ATD G    SS T + + +    ++  P F  ++Y  ++SE   +
Sbjct: 530 VSGSSFTVLVWATDKGTPALSSNTTLMLRISDAVDS-PPRFDVSSYTASISEAFDV 584



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 8/148 (5%)

Query: 41  VNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           ++++D+NDN P   L     +  +       ++ + ATD D G+NA ITY I    +   
Sbjct: 236 ISISDVNDNPPIFDLSRYTVMLKENAAVGTDVITLNATDEDTGLNALITYRIDRTQSDPN 295

Query: 99  HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK----SSQTIVEVSVVPGPNTRS 152
             F I+  +G I    +L   ++  + + V+A D G +    S+  IVE+  V     + 
Sbjct: 296 AVFEIESENGRIYLNKQLDFEQKVLHKLVVEAVDNGSQPQVGSTVVIVEIGDVNDNKPQI 355

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
            V   +  +  VSEGA     +A ++VS
Sbjct: 356 NVIFLDAGEAKVSEGAQPGDYIARVSVS 383


>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
            leucogenys]
          Length = 4981

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +  TGKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDSTSGQVALTGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 3002 LIKVTAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFFITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V ++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3060 TAKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3112



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T +L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLT-RL 1903

Query: 117  IAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +  E    Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + ST
Sbjct: 1904 LDYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGST 1962

Query: 174  VATITVSRLASG 185
            V    V+    G
Sbjct: 1963 VLVFNVTDADDG 1974



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYARLVVTLLDVNDEKPLFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S   + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2270



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P I +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVTEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGIITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTITGSSL 2594



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 11/172 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDIGINAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQV 2894



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T  +G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +   + V +   N   P+F Q   YDV+V E A
Sbjct: 564 SYARLVVTLLDVNDEKPLFSQPEGYDVSVVENA 596



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINEKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNIYSVQISEGVPIGTHVTFVS 3427



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V+E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVTEDAVVGSSVLQVAAADADEG 280



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N EI Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       +V E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSVVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEAT 76
            ++  + A+++     S  +S+ +++ D NDN P  P   I    ++       ++ + A 
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSVVENIPIGTSVISVTAH 1445

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A D
Sbjct: 1446 DPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAND 1500



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      + +  N+ D+NDN P   +       ++       ++    TD 
Sbjct: 1912 YILTVRAEDGGGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA 1971

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            D GVN+++TYSI   S   L +F +D ++G+++    L    Q  Y++ VQ  D
Sbjct: 1972 DDGVNSQLTYSI--ASGDSLGQFTVD-KNGILKVLKALDRESQSFYNLVVQVHD 2022


>gi|281345412|gb|EFB20996.1| hypothetical protein PANDA_000353 [Ailuropoda melanoleuca]
          Length = 3819

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            ++ + ATD D GVNAEITY+  +  N     F++D ++GV+ T G+L   E+  Y+I V+
Sbjct: 1716 VLSVMATDLDEGVNAEITYAFINTGNVVKQLFKLDSKTGVLTTGGELDFEERESYTIGVE 1775

Query: 128  ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            A D G  ++   +++ ++   N  +P    ++    + E A + + VA I    L SG
Sbjct: 1776 AKDGGRHTAHCKIQIDIL-DENDNAPEVTLDSESKQIQEDAELGTVVALIKTHDLDSG 1832



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 10/149 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTA-ASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
           +V K +LDR+  N   F   V+     G    S    + +++ D NDN P     I  + 
Sbjct: 194 LVLKHSLDREEQN---FHQLVLTAVDGGDPPQSGTTQIQIHVTDANDNPPVFIQDIYKVS 250

Query: 61  IQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--- 116
           +Q G  R   ++++ ATD D GVNAEITYS ++V       F +D R+G I T       
Sbjct: 251 LQEGVPRGFSVLRVTATDQDEGVNAEITYSFHNVDELVEQFFNLDKRTGEITTKDDFDFE 310

Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSVV 145
           IA   Y+ +V+A D G  ++   ++V ++
Sbjct: 311 IAN-SYTFSVEAKDPGDLAAHCSIQVEIL 338



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 11/107 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F   + AR++   A S  VSL V ++D NDNAPR+  P + P          +A +    
Sbjct: 528 FELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + K+ A D D G NA ++Y +   S  GL  F +  R+G + T   L
Sbjct: 588 VTKVVAVDADSGHNAWLSYHVLQASEPGL--FSLGLRTGEVRTARAL 632



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 11/107 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
            F   + AR++   A S  VSL V ++D NDNAPR+  P + P          +A +    
Sbjct: 1983 FELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYL 2042

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            + K+ A D D G NA ++Y +   S  GL  F +  R+G + T   L
Sbjct: 2043 VTKVVAVDADSGHNAWLSYHVLQASEPGL--FSLGLRTGEVRTARAL 2087



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++ + A D D GVN E+TYS   ++   L  F+++P +G + T   L   E   Y + V
Sbjct: 3254 RLLTVHAVDLDEGVNGEVTYSFRKITQKILQIFQLNPHTGELSTLEGLDYEEFSYYEMQV 3313

Query: 127  QATDTGGKSSQTIVEVSVV 145
            QA D  G  ++  V ++++
Sbjct: 3314 QAQDGAGSMTRAKVMITIL 3332



 Score = 39.7 bits (91), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 15/162 (9%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQA-GEARRQIVKIEATDNDLGVNAE 85
            K G   +    + +++ D NDNAP + +     QIQ   E    +  I+  D D G N E
Sbjct: 1777 KDGGRHTAHCKIQIDILDENDNAPEVTLDSESKQIQEDAELGTVVALIKTHDLDSGFNGE 1836

Query: 86   ITYSIYHVSNTGLHKFRI--DPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQT 138
            +   +      G   F+I  D ++  +  T  ++  EQ   Y+IT+  TD G    SS  
Sbjct: 1837 VFCQL-----QGKFPFKIVQDTKNTYMLVTDGVLDREQIPEYNITITVTDRGKPPLSSNR 1891

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V ++++   N  +PVF Q  Y V+V+E     +++A ++ S
Sbjct: 1892 SVLLNII-DVNDNAPVFGQAFYLVHVAENNPPGASIAQVSAS 1932



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 41/180 (22%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----------PPIQIQAGEARR 68
            +  QV A++  G+     V +T+   D+NDNAP + +           PP  I       
Sbjct: 3309 YEMQVQAQDGAGSMTRAKVMITIL--DVNDNAPEVTVTSVSNSIPEDTPPGAI------- 3359

Query: 69   QIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
             +      D D G N E+T +I     + +  +  + +R+         T K +  E+  
Sbjct: 3360 -VALFYLQDRDSGKNGEVTCTISENLPFKLERSIDNYYRL--------MTAKNLDREKCS 3410

Query: 122  -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
             Y+IT++ATD G     +   +SV V   N   P F Q++Y V + E    GASI S  A
Sbjct: 3411 VYNITLKATDGGTPPLYSETHISVNVADTNDNPPAFPQSSYSVYIPENNPRGASIFSVTA 3470



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
            D NDNAP     P  ++   E       ++ + ATD D GV+AE+TYS   V+      F
Sbjct: 2503 DANDNAPVFTQ-PVYRVSIPENLPVGTPVLTVNATDQDEGVHAEVTYSFLRVTEKISKIF 2561

Query: 102  RIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
             ++  +G I T+  L   +   Y + ++A D  G   +  V ++++
Sbjct: 2562 CLNISTGEISTSANLDYEDSRFYELDIEARDRPGLLDRAKVFITIL 2607



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIP-------PIQIQAGEARRQ 69
             + +V A +      S  VSL++ + D NDN P +  P +P        +  ++ E    
Sbjct: 3522 LQLRVTAHDSGDPPLSSNVSLSIFIVDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYL 3581

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            + K+ A D D G NA ++Y +   S  GL  F +   +G + T   L+  +  + S+ V 
Sbjct: 3582 VTKVVAVDRDSGQNAWLSYRLLKASEPGL--FAVGLHTGEVRTARALLDRDALKQSLVVA 3639

Query: 128  ATDTG 132
              D G
Sbjct: 3640 VQDHG 3644



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V+   LDR+     ++   V+A ++     S   S+T+++ D+NDNAP       + 
Sbjct: 402 YKLVTDGPLDRE--EIPEYNITVLATDRGKPPLSSSTSITLHIADVNDNAPVFGQAFYL- 458

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTG 114
           +   E       I ++ A+D DLG N  ++YSI    +    L  +  +  +SGV+    
Sbjct: 459 VHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSGVV-FAQ 517

Query: 115 KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           +    EQ   + +T+QA D G  +    V + V+
Sbjct: 518 RAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 551



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 45   DINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
            D NDNAP        +  P  I  G    +++ + ATD D G+N E+TYS  +  +    
Sbjct: 1020 DANDNAPLFTRSEYRVSVPENIPVGT---RLLTLTATDPDEGINGELTYSFRNEEDKISE 1076

Query: 100  KFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
             F++D   G I T   L   E   Y + V A D G   +   V ++V
Sbjct: 1077 TFKLDSNLGEISTLQPLDYEESRFYLMEVVAQDGGALLASAKVLITV 1123



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 33/176 (18%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----------PPIQIQAGEARR 68
            +   + AR++ G      V +T+   D+NDN P + +           PP  +       
Sbjct: 2584 YELDIEARDRPGLLDRAKVFITIL--DVNDNVPEVVVTSGSRSVAESTPPGTV------- 2634

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSIT 125
             I   +  D D G N  +T SI       L K  +D    ++  T  ++  EQ   Y+IT
Sbjct: 2635 -IALFQVYDRDSGQNGLVTCSISRNMPFELEK-SVDNYYQLV--TNTVLDREQVSLYNIT 2690

Query: 126  VQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
            + ATD G    S++T++ ++V    N   P F Q++Y V + E    GASI S  A
Sbjct: 2691 ITATDKGIPPLSTETLIYLNVA-DTNDNPPAFPQSSYSVYIPENNPRGASIFSVTA 2745


>gi|162138882|ref|NP_001104606.1| protocadherin alpha 6 precursor [Gallus gallus]
 gi|45790054|gb|AAS77410.1| cadherin-related neuronal receptor 6 [Gallus gallus]
          Length = 989

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPI 59
           +LV++   LDR+  +  + R  + A +    A +  V L +++ D NDNAP+    +  +
Sbjct: 191 FLVLTHP-LDRE--SLSEHRLVLTASDGGRPALTGTVQLVISVLDANDNAPQFNQSVYKV 247

Query: 60  QIQAGEARRQIV-KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q+    A   +V ++ ATD D+G N E +YSI   V  +    F IDPR+G I  TG L 
Sbjct: 248 QLPEDAAEGTLVARVAATDPDVGFNQEFSYSIVSSVPASQSDAFSIDPRTGEIRLTGPLD 307

Query: 118 AGE--QYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +  Q+ + ++A D G     G  S  I+EV  V   N  +P     +  V V E A++
Sbjct: 308 FEDVLQHELQIEARDKGTPPLSGHCS-VILEVLDV---NDNAPEVWVTSLSVPVPEDAAL 363

Query: 171 NSTVATITVSRLASG------CAI 188
            + VA ++VS   SG      CA+
Sbjct: 364 GTVVALLSVSDRDSGPNGRVRCAV 387



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 41  VNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDNAPR P     I I           +E A+D D+G NA+++YS+    +  L
Sbjct: 119 VEVTDINDNAPRFPAAYKNISIAESSLPGSRFPLEGASDADIGSNAQLSYSLSPSEHFAL 178

Query: 99  HKFRIDP--RSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                D   +S  +  T  L   +  ++ + + A+D G  +    V++ + V   N  +P
Sbjct: 179 DVKSPDDNLKSLFLVLTHPLDRESLSEHRLVLTASDGGRPALTGTVQLVISVLDANDNAP 238

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F Q+ Y V + E A+  + VA +  +
Sbjct: 239 QFNQSVYKVQLPEDAAEGTLVARVAAT 265


>gi|449673392|ref|XP_004207945.1| PREDICTED: protocadherin Fat 4-like [Hydra magnipapillata]
          Length = 2166

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 11/145 (7%)

Query: 40  TVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           T+ +ND+NDN+P   R   I  ++ +       I+KI ATD D+G+N EITY I  +   
Sbjct: 181 TIQINDLNDNSPVFDRYRYILTVK-ENQLVNTIIIKINATDIDIGINKEITYRI--LGGN 237

Query: 97  GLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
             + F +DP  G +    T K    ++Y++TV ATD G   +S  T +E++ V   N  +
Sbjct: 238 KENVFSLDPNIGSLTLIATLKFRKQKKYTLTVAATDKGLPSRSFITFIEIT-VEDTNDFT 296

Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
           P+F    Y  +++E   I + V  I
Sbjct: 297 PIFIDQPYVKSLNENVEIGTNVLLI 321



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 14/171 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--- 58
            L+  K+N+D +  +     F  I+ E         + L V++ D+NDN P          
Sbjct: 903  LLFLKKNIDHEKKD-----FYNISVEASDARKKEVIYLPVDVIDVNDNYPIFNQASYSGN 957

Query: 59   IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
            ++ ++ +  R IV + A+D D  +NAEI Y I   +N+    F ID + G +    KL  
Sbjct: 958  VEEESDDFTRVIVTVIASDKDSNLNAEIEYKIVSGNNS---VFEIDSKLGEVYIHKKLDR 1014

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
               E Y I V A D G  S  T V +++ V   N   P F+ + Y+++V E
Sbjct: 1015 EETETYIIEVAAVDKGTPSLCTSVFITINVADINDNYPQFENDVYNISVKE 1065



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           ++  + L+R+  +   ++F V A +K        V++ V + DINDN P +      QI 
Sbjct: 698 IIKAKKLNREEKDL--YKFIVRASDKGTPPLFSLVNVVVTITDINDNMPLIED-KRYQIS 754

Query: 63  AGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       ++KI A+D D+G N +  Y I    N+  H F I+  +GVI T   L   
Sbjct: 755 IKETVSFATFVLKITASDLDIGKNGQFVYKIKSSPNS--HHFFINSSTGVIMTATALDYE 812

Query: 120 --EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
               Y + ++  D G    S   +V +S+    NT +P F+Q
Sbjct: 813 TVSSYILNIETIDKGSPPLSDSAVVNISINHEDNT-APKFEQ 853



 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +S  +++ D NDNAP     P      G+    I    A D D+G+N++I YSI +    
Sbjct: 1241 ISYIIDVTDDNDNAPVFLNTP----YYGQEVLYIEFTHANDIDIGINSQIAYSILN---- 1292

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
                F I+  +G I TT K +  E    + + + A+D    +  T+V V+++   N   P
Sbjct: 1293 NKEVFSINATTGDIYTT-KAVDYETVQSFVLNISASDWKFTTFATVV-VTII-NLNDNYP 1349

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRL 182
             F+   Y  ++ E A+ NS V  +  + L
Sbjct: 1350 QFEMFEYFASILENATRNSLVVNVNANDL 1378



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 23/147 (15%)

Query: 5   SKENLDRDPPNPG--------KFRFQ------VIAREKQGTAASVPVSLTVNLNDINDNA 50
           +KEN+    PN G        KFR Q      V A +K   + S    + + + D ND  
Sbjct: 237 NKENVFSLDPNIGSLTLIATLKFRKQKKYTLTVAATDKGLPSRSFITFIEITVEDTNDFT 296

Query: 51  PRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS 107
           P     P +  +  +  E    ++ I A DND G+N ++T+S+ ++ +     F I+ ++
Sbjct: 297 PIFIDQPYVKSLN-ENVEIGTNVLLINAKDNDFGLNGDLTFSLENLQSL---PFAINSKT 352

Query: 108 GVIETTGKLI--AGEQYSITVQATDTG 132
           GVI T   +     + +S TV   D G
Sbjct: 353 GVITTYLHIDYEVTQSFSFTVYVQDGG 379



 Score = 35.8 bits (81), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEA 66
           +DR+  N  K   QV    K    +   +S+T+   D NDN P+   I      ++   A
Sbjct: 521 IDREVLNNIKATIQVKDNGKNQRESKTLLSVTIL--DENDNKPKFDFISYNFSFVEEQNA 578

Query: 67  RRQIVKIEATDNDLGVNAEITYSIYH 92
             ++ K+  TD D+G+N EI + + H
Sbjct: 579 GTEVGKVFVTDEDMGINKEIVFDVIH 604


>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog), 5
            prime [Microtus ochrogaster]
          Length = 3301

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 922  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 981

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 982  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1040

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V + V +   N  +PVF    ++V V E + + S VA IT
Sbjct: 1041 PLRTPVSIQVTIQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1085



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND+AP        Q 
Sbjct: 379 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 431

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 432 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPRSGLIS 491

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 492 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 551

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 552 DVRPHTVVLRVTAT 565



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D+D+G NA ITY +       L +FRID  SG I     L   +Q  Y++ + 
Sbjct: 872 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 927

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   K+  T VEV +V   N  +P F  + Y   VSE A   ++V  I+ +
Sbjct: 928 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 981



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           + F V AR+      S   S+TV + D+NDN P   M     ++  E       +V + A
Sbjct: 717 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 775

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D   N+ I+Y I        ++F I  + GV   T  L      E+Y   V      
Sbjct: 776 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 831

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   + STV  I+ S
Sbjct: 832 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 878



 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 50  APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
           A R P  P    Q        A   ++++ A D D G    + YS+  + N+  L  F I
Sbjct: 314 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSI 373

Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
           DP+SG+I T   L   + E++ + V A D G    S+ T+V V+V    N  +PVF+Q  
Sbjct: 374 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 432

Query: 160 Y----DVNVSEGASINSTVAT 176
           Y      NV EG  I    AT
Sbjct: 433 YRETLRENVEEGYPILQLRAT 453



 Score = 44.7 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 521 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANGLVHYN 578

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 579 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 636

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    + V+V E A +  +V  I
Sbjct: 637 VDINDHTPIFVSTPFQVSVLENAPLGHSVIHI 668



 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS+ V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1045 PVSIQVTIQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1101

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1102 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1159

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1160 NSPVLNNFQILFNNYVSNRSD 1180


>gi|410967896|ref|XP_003990449.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Felis catus]
          Length = 2931

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 788 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 839

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 840 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYIL 896

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 897 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 953



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 248 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 300

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +         + F IDPRSGVI T G
Sbjct: 301 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 360

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y +TV+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 361 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 420

Query: 170 INSTVATITVS 180
             + V  +T S
Sbjct: 421 PGAPVLRVTAS 431



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 738 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 793

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 794 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 852



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+      +   S++V + D+NDN P     P   
Sbjct: 568 WISVAAE-LDREEVD--FYSFGVEARDHGTPVLTASASVSVTILDVNDNNPTFTQ-PEYT 623

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 624 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 674

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 675 SLALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDA---NTHRPVFQSSHYTVNVNED 731

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 732 RPAGTTVVLISAT 744



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           S   ++ +++ D NDNAP+      + +Q  E       ++++ A+D D G NA + YSI
Sbjct: 387 SATAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI 445

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
             +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V
Sbjct: 446 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 502

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   N  +P+F    +   V E   +   V  +
Sbjct: 503 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 534



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 879  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 936

Query: 57   ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                 PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 937  VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 987

Query: 113  TGKLIAGE--QYSITVQAT 129
               L   +  +Y + +QAT
Sbjct: 988  LVDLDYEDRPEYILVIQAT 1006


>gi|354486328|ref|XP_003505333.1| PREDICTED: cadherin-9 [Cricetulus griseus]
 gi|344244410|gb|EGW00514.1| Cadherin-9 [Cricetulus griseus]
          Length = 788

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 20/196 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           + + + LDR+  +    R + I R K G          + ++DINDN P+         +
Sbjct: 109 IHAAKKLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 167

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G +  Q+   +A D + G +A++ YSI      G   F +DP SG+I+T    
Sbjct: 168 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 222

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           ++    EQY + +QA D GG+    S  T V +++    N   P F Q+TY  N  E A 
Sbjct: 223 MSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSLESAP 281

Query: 170 INSTVATITVSRLASG 185
           + + +  I  +   +G
Sbjct: 282 LGTHLGRIKANDPDTG 297



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 31/183 (16%)

Query: 20  RFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQIVK 72
           ++QV+  A++  G    +  + TVN  L D+N+N PR P     Q  + E+      + +
Sbjct: 230 QYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSLESAPLGTHLGR 288

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSITV 126
           I+A D D G NAE+ YSI      G   F +    D + G+I     L   ++  Y++ V
Sbjct: 289 IKANDPDTGENAELEYSI--SEGEGSDMFEVITDKDTQEGIITVKQNLDFEKKMLYTLRV 346

Query: 127 QATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A++T         G      +V++SV  V  P    PVF + +Y + V E     S + 
Sbjct: 347 DASNTHPDPRFLHLGPFKDTAMVKISVEDVDEP----PVFSKRSYLMEVDEDVKEGSIIG 402

Query: 176 TIT 178
            +T
Sbjct: 403 QVT 405


>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
           guttata]
          Length = 5033

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 18/183 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAG 64
           LDR+      F  QV+A +      S    + V + D+NDN+   P+  P+Q    IQ  
Sbjct: 693 LDRE--EQSHFSLQVLATDLGSPPLSSVARVNVTILDVNDNS---PVFYPVQYFAHIQEN 747

Query: 65  E-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
           E A   +  + ATD DLG N  + YSI   S     +F++  ++GVI T   L   E+  
Sbjct: 748 EPAGTYVTTLSATDPDLGPNGTVKYSI---SAGDTSRFQVHGQTGVITTKIALDREEKTA 804

Query: 122 YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           Y + + ATD G   S  Q IV ++V+   +   PVF Q TY   V E  ++   V T+  
Sbjct: 805 YQLQIVATDGGHLQSQNQAIVTITVLDTQD-NPPVFSQGTYSFVVFENVALGYHVGTVFA 863

Query: 180 SRL 182
           S +
Sbjct: 864 STM 866



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            F   VIA + QG    +    TV   + DINDNAP+    +      +      Q++++ 
Sbjct: 1221 FSLTVIATD-QGLPKPLKDQATVQIYMKDINDNAPKFLKDLYQATISELAANLTQVLRVS 1279

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D GVN  I YS+  +     ++F ID  +G +   G+L   A   YS+ +QA D+G
Sbjct: 1280 ASDVDEGVNGLIQYSV--IKGNEENQFVIDTSTGQVTLVGRLDYEATASYSLVIQAVDSG 1337

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S  +   +S+ V   N  SP F ++T  V+V E   +   V+++T +   SG
Sbjct: 1338 AVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVLENMRVGELVSSVTATDSDSG 1391



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 12/149 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDN-DLGVNAEITYSIYHV 93
            ++T+N+ D NDNAP L + P       +  R    ++K+ A D+ D G+N+E+ Y I   
Sbjct: 3016 TVTINVVDSNDNAP-LFLTPKYFTPVTKNVRVGTNLIKVTAVDDKDFGLNSEVEYFIADE 3074

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
            S T  +KFR+D  +G I  +  L+A   + +   V+A D G    SS+  VE+ VV   N
Sbjct: 3075 SKT--NKFRLDRNTGWISVSSSLMADLNKNFLFKVKAKDKGNPPLSSEAAVEI-VVTEEN 3131

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +P F Q+   V + E  S+ + V T++
Sbjct: 3132 YHTPEFSQSRMSVTIPESYSVGTVVRTVS 3160



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 18/192 (9%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG 64
           S   LDR+     +    V AR++          L V + D+NDN PR       Q+   
Sbjct: 571 SSSRLDRE--TASQVVLNVSARDQGVQPKFSYAQLVVTILDVNDNKPRFGQPEGYQVSLA 628

Query: 65  E---ARRQIVKIEATDNDLGVNAEITYSIYHVSN----------TGLHKFRIDPRSGVIE 111
           E   +  +++ + ATD DLG N  + +S+               T    FR+DP SG + 
Sbjct: 629 ENSPSGTELLVLSATDGDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDPVSGKLS 688

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
           T  +L   EQ  +S+ V ATD G     ++  V+V +   N  SPVF    Y  ++ E  
Sbjct: 689 TISQLDREEQSHFSLQVLATDLGSPPLSSVARVNVTILDVNDNSPVFYPVQYFAHIQENE 748

Query: 169 SINSTVATITVS 180
              + V T++ +
Sbjct: 749 PAGTYVTTLSAT 760



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y+I   S
Sbjct: 3226 CSVTVNVIDVNDNSPAFSPEEYFPTVLENAPSGTTVICLNATDADSGSNAVIAYAI-QSS 3284

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +G I T G L     + Y +TV+A +   +   +   V++ + G N  
Sbjct: 3285 DSDL--FVIDPNTGTITTQGFLDYETKQSYHLTVKAFNVPDEERCSFATVNIQLEGTNEY 3342

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   VSE AS  + V  +  S
Sbjct: 3343 VPRFVSKLYYFEVSEAASKGTVVGEVFAS 3371



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  V + + ++D+ND+ P+   P+     
Sbjct: 1842 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DVRINITVSDVNDHIPKFSKPVYSFDI 1896

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D G+N EITY+I      G+  F ++P +GV   T  L   A
Sbjct: 1897 PEDATPGSLVAAILATDDDSGINGEITYTISEDDEEGI--FFLNPVTGVFNLTRALDYEA 1954

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +++   N   PVF   +   ++ E     S +   T
Sbjct: 1955 QQYYILTVRAEDGGGQFTAIRVYFNIL-DVNDNPPVFGMASCSTSLMENLPPGSAILNFT 2013

Query: 179  VSRLASG 185
            V+    G
Sbjct: 2014 VTDADDG 2020



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1774 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-ILQLTAMDADEGANALVTYTIISGADDS 1832

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             H   IDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N   P F
Sbjct: 1833 FH---IDPESGELIATKRLDRERRSKYSLLVRA-DDGLQSSDVRINIT-VSDVNDHIPKF 1887

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E A+  S VA I  +   SG
Sbjct: 1888 SKPVYSFDIPEDATPGSLVAAILATDDDSG 1917



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 12/172 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
            ++ +V+AR   G A +    + + + D+NDN+P     +     ++  +A   I + +A 
Sbjct: 908  YQLKVVAR---GGAITGDAVVNITVKDLNDNSPHFIQVVESVNVVENWKAGHTIFQAKAL 964

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG--G 133
            D D GVN  + YS+   +  GL  F I+ ++G I  TG L I    Y + + A+D G   
Sbjct: 965  DPDEGVNGVVLYSLKQ-NPKGL--FSINEQTGAISLTGPLDINAGSYQVEILASDMGVPQ 1021

Query: 134  KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             SS  I+ VSV    N   PVF Q +Y++ + E   +NS    +  S   SG
Sbjct: 1022 LSSAFILTVSV-HDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDKDSG 1072



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L +++ D+NDN P     P I +I    + R+I+ + A 
Sbjct: 2682 KYVVWIEARDMGFPPFSSYKKLEISVIDVNDNVPEFERDPFIAEIAENLSPRKILTVAAV 2741

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G+N ++ Y I  +     + F I+  +G I +   L   +  QY++T++A+D G  
Sbjct: 2742 DRDSGLNGQLNYEI--IEGNTENSFSINRATGEIRSIRPLDREKLSQYTLTIKASDKGIP 2799

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               T V+V + V   N  +P F Q  +  +V E A +  TVA +T S
Sbjct: 2800 LQSTTVKVIINVLDENDNAPRFSQ-IFSASVPENAPLGFTVARVTTS 2845



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 13/165 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      +   V+A +K   + S    + V + DINDN P        +++  E   
Sbjct: 2158 LDREAV--ANYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQ-KLYKVEVAENTL 2214

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
                ++++ A D D G N ++ Y+I  VS     +FRID  +GVI T  K +  E+   Y
Sbjct: 2215 TGTDLIQVLAADGDEGTNGQVRYAI--VSGDANSEFRIDSVTGVI-TVAKPLDREKKPSY 2271

Query: 123  SITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            ++TVQ++D G         VS+V    N   P F+ + Y VNV E
Sbjct: 2272 TLTVQSSDRGSSPRTDTTTVSIVLKDVNDFIPTFELSPYSVNVPE 2316



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 32/201 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
           +VS+  LDR+     +   QV  + +      + V++T+   DINDN P         R+
Sbjct: 198 LVSRGGLDREATPTYQLLVQVEDKGEPRRRGYLQVNVTIQ--DINDNPPIFSQTLYQARV 255

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK------FRIDPRS 107
           P   P+          ++++ A D D G NA+I Y +     +G         F +DP S
Sbjct: 256 PEDAPVGAS-------VLQVTAADADEGTNADIRYRLEGGDGSGAGDGAGSLPFEVDPES 308

Query: 108 GVIETTGKLI--AGEQYSITVQATDTG-----GKSSQTIVEVSVVPG-PNTRSPVFQQNT 159
           GVI    +L     +QYS+TVQATD G     G++   I  + V    P  +   F   +
Sbjct: 309 GVIRIRERLDYEVRQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATS 368

Query: 160 YDVNVSEGASINSTVATITVS 180
              +V E A+  + VA +TVS
Sbjct: 369 RFASVDENAAPGTVVALLTVS 389



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 20/193 (10%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+     ++   V+A ++     +  V++TV L D+NDN P       +     E
Sbjct: 1101 KSELDRELQE--RYVLLVVASDRAVEPLNATVNVTVILEDVNDNRPLFNSTNYVFYFEEE 1158

Query: 66   AR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI------ 117
             R    + KI A D D G N E+ YS  H+       F ++  +G I +T +        
Sbjct: 1159 QRGGSYVGKINAVDKDFGPNGEVRYSFEHMQ----PDFELNTVTGEIRSTHQFDREALMR 1214

Query: 118  --AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
                  +S+TV ATD G       Q  V++  +   N  +P F ++ Y   +SE A+  +
Sbjct: 1215 QRGAAVFSLTVIATDQGLPKPLKDQATVQI-YMKDINDNAPKFLKDLYQATISELAANLT 1273

Query: 173  TVATITVSRLASG 185
             V  ++ S +  G
Sbjct: 1274 QVLRVSASDVDEG 1286



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
            N G ++ +++A +      S    LTV+++D+NDN P    +   I I   E    +  K
Sbjct: 1004 NAGSYQVEILASDMGVPQLSSAFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK 1063

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDT 131
            ++A+D D GVN EI YSI    N G   F I P   + I++       E+Y + V A+D 
Sbjct: 1064 VQASDKDSGVNGEIAYSIIE-GNAG-DAFGIFPDGQLYIKSELDRELQERYVLLVVASDR 1121

Query: 132  GGKSSQTIVEVSVV-PGPNTRSPVFQQNTY 160
              +     V V+V+    N   P+F    Y
Sbjct: 1122 AVEPLNATVNVTVILEDVNDNRPLFNSTNY 1151



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+ND+     +P+L  +P   PI          + K +ATD D G N+ I YS+
Sbjct: 2083 VSIILLDVNDSPPSFISPKLTYVPENTPIDTV-------VFKAQATDPDSGPNSYIEYSL 2135

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
                    +KF I    G +  TG+L   A   Y++TV ATD G  S  +  +V V V  
Sbjct: 2136 LPPPG---NKFSIGTIDGEVRLTGELDREAVANYTLTVVATDKGQPSLSSSTDVVVIVLD 2192

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P+F Q  Y V V+E
Sbjct: 2193 INDNNPLFAQKLYKVEVAE 2211



 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   ++    ++  +V ++ A+D D+G++ E+ Y I+   N
Sbjct: 3331 TVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFASDRDMGIDGEVHYLIF--GN 3388

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+ID +SG I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3389 SRKKGFQIDEKSGQIYVSGPLDREKEERISLKVLAKNLGSIRGADIDEVTVNITVLDAND 3448

Query: 151  RSPVFQQNTYDVNVSEG 167
              PVF    Y++ +SEG
Sbjct: 3449 -PPVFTLGAYNIRISEG 3464



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 13/176 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + A +K     S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2779 LDRE--KLSQYTLTIKASDKGIPLQSTTVKVIINVLDENDNAPRFSQIFSASVPENAPLG 2836

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2837 FTVARVTTSDEDIGVNAVSRYSIRDTS----LPFTINPSTGDITISRPLNREDTDRYRIR 2892

Query: 126  VQATDTGGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S+   + VS V   N  +P F + +Y +   E   I   V  ++ +
Sbjct: 2893 VSAHDSGWTVSTDVTIFVSDV---NDNAPRFTKPSYYLECPELPGIGLKVTQVSAT 2945



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 15/149 (10%)

Query: 44   NDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            +D+NDN P+    P     P    +G     +  +  TD D G NAE+ YS+   ++   
Sbjct: 2505 DDVNDNPPKFQHHPYVTHVPSPTTSGSF---VFAVTVTDADAGSNAELHYSLVGKNS--- 2558

Query: 99   HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQ 156
             KF IDP  G I     L+   + +++V   D+G   K+  T V V  V       P  Q
Sbjct: 2559 EKFHIDPARGAILAAKPLVGESEVTLSVHVRDSGRYPKTDSTTVTVRFV--DKAEFPRVQ 2616

Query: 157  QNTYDVNVSEGASINSTVATITVSRLASG 185
                     E  ++ + V T++ S    G
Sbjct: 2617 AEQETFTFPENQAVGTLVTTVSGSSARGG 2645



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEAT 76
            ++  + A+++     S  +S+ +++ D NDN P  P   I    ++       ++ + A 
Sbjct: 1432 YKLNITAKDQGRPLQSSTMSVVIHVRDFNDNPPHFPPGDIFKSIVENVPVGSSVISVTAH 1491

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D D  +N ++TY+I      G H FRID   G I T  ++       + +TV+ATD
Sbjct: 1492 DPDADINGQLTYAIIQQMPRGNH-FRIDEVRGTIFTNAEIDREFANLFELTVKATD 1546



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQ-IQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
            L++++ D NDN+P  P    ++  ++ ++ GE    +  + ATD+D G NA++ YSI   
Sbjct: 1347 LSIDVLDENDNSPSFPKSTLLVDVLENMRVGEL---VSSVTATDSDSGDNADLHYSITGT 1403

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-SSQTIVEVSVVPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G    S T+  V  V   N 
Sbjct: 1404 NNHG--TFSISPNTGSIFLAKKLDFETQYLYKLNITAKDQGRPLQSSTMSVVIHVRDFND 1461

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   + S+V ++T
Sbjct: 1462 NPPHFPPGDIFKSIVENVPVGSSVISVT 1489



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D NDN P       L   P + I +      +  I A D D G N E+ Y I  
Sbjct: 1561 VTILVTDQNDNVPVFVSQNALAADPSVVIGS-----ILTTIIAADPDEGANGEVEYEIV- 1614

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++      
Sbjct: 1615 --NGDTETFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTEMTIIL-QGVD 1671

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             PVF Q  Y   + EG  I + V ++
Sbjct: 1672 GPVFTQPKYITILKEGEPIGTNVISL 1697



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 25/171 (14%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD D G N     S 
Sbjct: 112 TYPSEVRVLVLDLNDNAPVFPD-PSIVVTFKEDTGSGRQLILDTATDADSGTNGVDHGSY 170

Query: 91  YHVSNTGLHKFRID---------------PRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
             V+     +FR++                R G+        A   Y + VQ  D G   
Sbjct: 171 RIVAGNEEGRFRLNITLNPSGEGAFLHLVSRGGLDRE-----ATPTYQLLVQVEDKGEPR 225

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V +   N   P+F Q  Y   V E A + ++V  +T +    G
Sbjct: 226 RRGYLQVNVTIQDINDNPPIFSQTLYQARVPEDAPVGASVLQVTAADADEG 276



 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 20/85 (23%)

Query: 38  SLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           SL + +NDIND+ P              +PP     G        + ATD D G+NA + 
Sbjct: 481 SLVIFVNDINDHPPVFGQSVYRVNISEDVPPGSYVRG--------LSATDRDSGLNANLK 532

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIET 112
           YSI  VS   L  FRI   SG++ T
Sbjct: 533 YSI--VSGNELGWFRISEHSGLVTT 555



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            ++++ L D+ND  P   + P     P  ++     + I+++ A D+D G+N+++TY +  
Sbjct: 2290 TVSIVLKDVNDFIPTFELSPYSVNVPENLET--LPKVILQVVARDDDQGLNSKLTYMLVA 2347

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
             +  G           ++++  +  A EQY + V A DTG  +      ++V V   N  
Sbjct: 2348 GNEEGAFTLSGSGELRLVQSLDRE-AKEQYLLLVTAADTGSPALTGTGTIAVTVDDVNDN 2406

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F  N Y   V E A   + +  +  S
Sbjct: 2407 VPTFAFNMYFATVPEDAPTGTDILLVNSS 2435


>gi|344272257|ref|XP_003407951.1| PREDICTED: cadherin-6 [Loxodonta africana]
          Length = 790

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 33/194 (17%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGE 65
           N+DR+  N  ++   + A++  G    +  + TVN  L D+NDN PR P     Q +  E
Sbjct: 223 NMDRE--NREQYHVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ-STYQFKTPE 279

Query: 66  AR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIA 118
           +      I +I+A+D D+G NAEI YSI      GL  F +    D + G+I T  KL+ 
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSI--TEGEGLDMFDVITDQDTQEGII-TVKKLLD 336

Query: 119 GEQ---YSITVQATDTG----------GKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNV 164
            E+   Y++ V+A++             K S T+ + V  V  P    PVF +  Y + +
Sbjct: 337 FEKKKAYTLKVEASNPHVEPRFLYLGPFKDSATVRITVEDVDEP----PVFSKLAYILQI 392

Query: 165 SEGASINSTVATIT 178
            E A IN+T+ ++T
Sbjct: 393 REDAQINTTIGSVT 406



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMI 56
           + + + LDR+       R Q + R K G          + ++DINDN P          +
Sbjct: 110 IQATKRLDREEKPVYILRAQAVNR-KTGRPVEPESEFIIKIHDINDNEPIFTKEVYTATV 168

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G    Q+   +A D   G +A++ YSI      G   F ++  +G+I+T    
Sbjct: 169 PEMS-DVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKTALLN 223

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           +     EQY + +QA D GG+    S  T V +++    N   P F Q+TY     E + 
Sbjct: 224 MDRENREQYHVVIQAKDMGGQMGGLSGTTTVNITLT-DVNDNPPRFPQSTYQFKTPESSP 282

Query: 170 INSTVATITVS 180
             + +  I  S
Sbjct: 283 PGTPIGRIKAS 293


>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
          Length = 3155

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 20/196 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 420 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 477

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T    F IDP SG++ TT
Sbjct: 478 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--RWFSIDPTSGIV-TT 530

Query: 114 GKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGAS 169
             L+  E   Q  + V ATD G     +   VSVV    N   P FQ+  Y+ ++ EG  
Sbjct: 531 AALLDYELEPQPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQ 590

Query: 170 INSTVATITVSRLASG 185
             +    +T +   SG
Sbjct: 591 PGTCFLQVTATDADSG 606



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 22/170 (12%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+     ++   V+A +      S    LTV++ D+ND AP        Q++     
Sbjct: 1508 SLDRE--QRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAF-----QQLEYSVLL 1560

Query: 68   RQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            R+       ++ ++ATD DLG N ++TY      N     F +DP +GV+ T   L   E
Sbjct: 1561 RENSPPGTSLLTLQATDPDLGTNGQVTYGGISGEN-----FSLDPDTGVLTTLRALDREE 1615

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
            Q  I  TV A D G     T V V V V   N  +P F      + V EG
Sbjct: 1616 QEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEG 1665



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            ++  Q++A +   +G A     +LTV + D+NDNAP     +   + ++       I+ +
Sbjct: 2246 RYHLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQTLYQVMLLEHTPPGSAILSV 2300

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  ++   YH+++     F IDP +G + TT G +  G +      + ++A
Sbjct: 2301 SATDRDSGANGHVS---YHLASPA-EGFSIDPNNGTLFTTVGTVALGHEGPGMVDVVLEA 2356

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G++++  V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2357 RDHGVPGRAARATVHVQLQ-DQNDHAPSFTLPHYRVAVTEDLPPGSTLLTL 2406



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1723 FQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPSYSVEVPEDAPAGTLLLQLQA 1781

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT-- 131
             D D G N  +T   Y++       F ++P SG + T   L   +   Y+ TV A D+  
Sbjct: 1782 HDPDAGANGRVT---YYLGTGAAGAFLLEPSSGELRTATTLDREQCPSYAFTVNAVDSAA 1838

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             G  S T+     V   N  +P F  +   + +     + ST
Sbjct: 1839 AGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVLST 1880



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 22/197 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            V S E LD +  NP   R +++ + + G A +  V LT+ L D NDNAPR   P      
Sbjct: 2028 VRSAEGLDFEA-NP---RLRLVLQAESGGAYAFSV-LTLTLQDANDNAPRFLQPHYVAFL 2082

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---I 117
             ++      ++++EA D D G + +I+YS+   S      F +DP +G I TT  L   I
Sbjct: 2083 PESRPLEGPLLQVEADDLDQGPSGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREI 2141

Query: 118  AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              E   + + ATD G     G ++ T++ +      N   P   Q  +++ VSE A + S
Sbjct: 2142 WAET-RLVLMATDRGSPALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGS 2195

Query: 173  TVATITVSRLASGCAIM 189
             +A +T + + SG  + 
Sbjct: 2196 EIAQVTGNDVDSGPVLW 2212



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 8/123 (6%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V++ + ND++PRL   P     A        + ++ ATD D G+N  +TYS+  +S    
Sbjct: 1091 VSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGLNGRLTYSLRQLSEDS- 1149

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV 154
              FRI P++G + T   L    Q  Y + VQ  D G   +S+   V ++V+   N  SP 
Sbjct: 1150 KAFRIHPQTGEVTTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVL-DLNDNSPT 1208

Query: 155  FQQ 157
            F Q
Sbjct: 1209 FLQ 1211



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 26/155 (16%)

Query: 21   FQVIAREKQGT---------AASVPVSLTVNLN----DINDNAPRLPMIP-------PIQ 60
             Q + RE+Q +         A S P S T  ++    D+NDN+P             PIQ
Sbjct: 1164 LQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ 1223

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +  G     +V  ++A D D G N  I   +Y ++  G   F + P SG + T   LI  
Sbjct: 1224 VPDGVPPGTLVTTLQAKDPDEGENGTI---LYILTGPGSELFSLHPHSGELLTAAPLIRA 1280

Query: 120  E--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            E   Y +T+ A D G     + +++ V   P+TRS
Sbjct: 1281 ERPHYVLTLSAHDQGSPPRSSSLQLLVQVLPSTRS 1315



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R    
Sbjct: 205 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAA 261

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L
Sbjct: 262 VSESLAPGSP---VLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPL 318

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 319 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 378

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 379 PGQLVARISVS 389



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P    + QI
Sbjct: 104 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAVLQI 150

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 151 PEHTALGTRYPLEPARDADAG---HLGTQGYALSGDGAGETFRLETRPGPDGAPVPELVV 207

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 208 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAAVSESL 266

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 267 APGSPVLQVYASDADAGA 284



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2574 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLS---LLSTSLAENQPPGTLVTTL 2630

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVI--------ETTGKLIAGEQYS 123
             A D D G    + YS+        G   F ++  +G +        E TG       + 
Sbjct: 2631 HAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTGS------FQ 2684

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V ATD G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2685 LLVGATDAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2728



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 21/186 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGT---------AASVP----VSLTVNLNDIN 47
            Y  +S EN   DP        + + RE+Q             S P    V++ V + D N
Sbjct: 1588 YGGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDEN 1647

Query: 48   DNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR 106
            D+AP        +++  G+  + +  + A+D D+G N ++ Y I     +G   F +D  
Sbjct: 1648 DHAPAFGSAHLSLEVPEGQDPQTLTTLRASDPDVGANGQLQYRILDGDPSG--AFVLDLA 1705

Query: 107  SGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
            SG   T   L       + + ++A D G    S+  +V V+V+   N  +P F   +Y V
Sbjct: 1706 SGEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDA-NDHAPAFPVPSYSV 1764

Query: 163  NVSEGA 168
             V E A
Sbjct: 1765 EVPEDA 1770



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 16/147 (10%)

Query: 41   VNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V L+D+NDN+P  P     ++ P     G     I  + A D D GVN+ I + +     
Sbjct: 880  VLLDDVNDNSPAFPAPEDTVLLPSSTAPGTL---IYTLRALDPDSGVNSRIAFPLL---A 933

Query: 96   TGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPNT 150
             G   F +DP +G I          G  + + ++A D G     +   + VV    G   
Sbjct: 934  GGGGAFTVDPTTGHIRLMGPLGPPGGPAHELELEARDGGSPPRTSHFRLRVVVQDLGTRG 993

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F   TY V++  G +  + V  +
Sbjct: 994  LAPHFDSPTYRVDLPSGTTPGTQVLQV 1020



 Score = 36.2 bits (82), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++     S  V +TV++ D+NDN       PP+  +A              
Sbjct: 2469 QYNLTVAATDRGQPPRSSAVPVTVSVLDVNDN-------PPVFTRAAYRVAVPEDTPVGA 2521

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++ +EA+D D G +  + +++      GL  F +D  SG +     L    Q  + + V
Sbjct: 2522 ELLHVEASDADPGPHGLVRFTLSSGDPLGL--FELDESSGDLRLARPLDCETQARHQLVV 2579

Query: 127  QATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   +EV  V   N   P F  +    +++E     + V T+
Sbjct: 2580 QAADPAGAHFALAPVTIEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2630


>gi|402913426|ref|XP_003919198.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
           partial [Papio anubis]
          Length = 365

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
           +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 43  YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 94

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
            +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L      QY +  
Sbjct: 95  SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 153

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 154 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 208


>gi|350595840|ref|XP_003484190.1| PREDICTED: protocadherin-11 X-linked-like [Sus scrofa]
          Length = 1026

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 70/148 (47%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L + + D NDNAP     P + +   E      Q+ KI A D D G NAEI Y +   + 
Sbjct: 452 LLIKVKDENDNAPVFTQ-PFLSLSVPENNSPGTQLTKISAMDADSGRNAEINYLLGFDAP 510

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
           +   +F +D R+G++    KL     E+YS TV A D G     T   V V V   N  S
Sbjct: 511 S---EFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PVF  N Y+  V E    + TV  ITV+
Sbjct: 568 PVFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 43.9 bits (102), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 17/144 (11%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLP 54
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P            
Sbjct: 624 VIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVPSSNYSFE 683

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           ++PP    +      +  + A DND G+NAE+ YS+   +  GL  F ID  SG I    
Sbjct: 684 LVPP----STNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGL--FIIDQTSGNITLKE 737

Query: 115 KLIAGE--QYSITVQATDTGGKSS 136
           K +  +   + + V+A D G   S
Sbjct: 738 KCVFADLGLHRLVVKAKDLGQPDS 761



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 19/192 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           L+V KE LDR+  +    + +V   E  G    S    L V++ D NDN P       I+
Sbjct: 201 LIVQKE-LDREEKDTYVMKIKV---EDGGFPQRSSTAILQVSVADTNDNRPVFKE-NEIE 255

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKL 116
           +   E       + ++ ATD D+G NA+I +   + +SN     F ++  +G+I     L
Sbjct: 256 VSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEPL 315

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGA 168
              E   + + V A+D G   ++ +V V+V      +P  + R  +   N   V +SE A
Sbjct: 316 DREESPNHKLLVLASDGGLTPARAMVLVNVTDINDNIPSIDIRYIINPING-TVVLSENA 374

Query: 169 SINSTVATITVS 180
            +N+ +A ITV+
Sbjct: 375 PLNTKIALITVT 386



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 43  LNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHK 100
           + DINDNAP  P  +  I I    A      +  A D D G+N    Y +      G   
Sbjct: 129 IEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYHLIK----GQSI 184

Query: 101 FRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSVV 145
           F +D    VIET       +LI  ++        Y + ++  D G   +SS  I++VSV 
Sbjct: 185 FGLD----VIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVA 240

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + R PVF++N  +V++ E A + S+V  +
Sbjct: 241 DTNDNR-PVFKENEIEVSIPENAPVGSSVTQL 271


>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
          Length = 4980

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1796 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITISDVNDHTPKFSRPVYSFDI 1850

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   A
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVLDYEA 1908

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +V+   N   P+F  N+Y  ++ E   + STV    
Sbjct: 1909 QQYYILTVRAEDGGGQFTTIRVYFNVL-DVNDNPPIFSLNSYSTSLMETLPLGSTVLVFN 1967

Query: 179  VSRLASG 185
            V+    G
Sbjct: 1968 VTDADDG 1974



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++TVN+ D NDNAP   +L    P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPSLLSETTVTVNIVDSNDNAPQFLKLKYFTPVTKNVKVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF+++  +G I     LI+   + + ITV
Sbjct: 3002 LIKVAAVDDKDFGLNSEVEYFISNGNHLG--KFKLENHTGWISVASPLISDLNQNFLITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ +V   N  +P F Q+     + E  SI + V T++
Sbjct: 3060 TAKDKGNPPLSSQATVQI-IVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVS 3112



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGSNGLIHYSV--IKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S    + V+L D+NDN+P   +  P+Q    IQ 
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSP---VFYPVQYFAHIQE 700

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGPNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTALDADEGANALVTYAIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ +   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E  +  S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
            K    + A +    A +   ++TVN+ D+NDN+P        P  ++   +   ++ + A
Sbjct: 3159 KHEMTISATDGGWVARTGYCTVTVNVIDVNDNSPVFTPDEYFPTVLENAPSGTTVIHLNA 3218

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D G NA I Y++   S++ L  F IDP +G+I T G L     + Y +TV+A +   
Sbjct: 3219 TDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGIITTQGFLDFETKQSYHLTVKAFNVPD 3275

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   +   V++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3276 EERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  +V   + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDTV---VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFAINEKNGNISLLGSLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S + +    V   N   PVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 976  LSSSFILTVCVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V L D+ND  P         +   E      +++ + ATD DLG N  + +S+   + 
Sbjct: 568 LVVTLLDVNDEKPVFSQPGGYDVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQE-AE 626

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
           T    FR+DP SG + T   L   EQ  YS+ V ATD G   +SS   + VS++   N  
Sbjct: 627 TVQKSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLL-DMNDN 685

Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
           SPVF    Y  ++ E     S + T++ +
Sbjct: 686 SPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+  +   +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--DVSNYTLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVYAADGDEGTNGQVRYGI--VGGNVNQEFRIDSVTGTI-TVAKPLDREKTPTYF 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREA-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---IFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 13/112 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIGANSELYYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEV 142
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLHGASEVTFSVHVKDGGSFPKADSTTVTV 2556



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDN+P     P + +I    + ++I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPQKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +  QY +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNQENSFSINHATGEIRSIRPLDREKVSQYILTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSTSVKVIINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L   A  QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREATPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   P+F  + Y   V E A++ S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPIFGSSHYQAGVPEDAAVGSSVLQVAAADADEG 280



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSQYILTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSIT 125
              + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L   +   Y I 
Sbjct: 2789 YTVTRVTTSDEDVGVNAISRYSIMDTS----LPFTINPSTGDIVISRPLNREDTDLYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  ++ +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTEIGSKVTQVSAT 2897



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ VS   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVNAVDKDFGPNGEVRYSFERVQPDFELHAVSGKITNTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+  S 
Sbjct: 3283 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIFGSSR 3342

Query: 96   TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
                 F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3343 K--KGFQINKKTGQIYVSGPLDREREERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y+V +SEG  I + V  ++
Sbjct: 3401 -PPVFSLNIYNVQISEGVPIGTHVTFVS 3427



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERKKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
             +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   
Sbjct: 1299 CTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSISGT 1357

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   N 
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFND 1415

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              P F       ++ E   I ++V ++T
Sbjct: 1416 NPPSFPPGDIFKSIVENVPIGTSVISVT 1443



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 8/166 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S    LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSFILTVCVHDVNDNPPVFDQLS-YEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N E+ YSI    N G   F + P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEVAYSIAE-GNAG-DAFGVFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V V+V+    N   P+F    Y     E     S V  +
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKV 1122



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFTQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS----ITVQATDTGGKSSQ 137
           +NA + YSI  VS   L  F I   SG++ T        + +    + + A D G     
Sbjct: 506 LNANLRYSI--VSGNELGWFYISEHSGLVTTGAAGGLDRELASLIVLNISARDHGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFSQPGGYDVSVVENA 596



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A+++     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENVPIGT 1437

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I TT ++       + +TV
Sbjct: 1438 SVISVTAHDPDADINGKLSYAIIQQMPRGNH-FGIDEVKGTIYTTAEIDREFANLFELTV 1496

Query: 127  QATD 130
            +A D
Sbjct: 1497 KAND 1500



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 24/185 (12%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
            ++LDR+      F   V A +    A +   ++ + ++D+NDN P          IP   
Sbjct: 2320 QSLDRETKE--HFVLTVTATDSGSPALTGTGTINIIVDDVNDNVPTFASKRYFTTIP--- 2374

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       ++ + A+D D   NA I          G  +F I+P +G I T+  L   A
Sbjct: 2375 -EDAPTGTDVLLVNASDADASTNAVIRII------GGNSQFTINPSTGQIITSALLDREA 2427

Query: 119  GEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E Y++ V ++D G     SS T V V+V    N   P FQ + Y  ++       S V 
Sbjct: 2428 KENYTLVVVSSDAGSPEPLSSSTSVLVTVT-DVNDNPPRFQHHPYVTHIPSPTPPGSFVF 2486

Query: 176  TITVS 180
             +TV+
Sbjct: 2487 AVTVT 2491



 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 11/178 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP---IQIQAGE 65
            LDR+   P  F   V A ++  T  +   ++++ L DIND  P   + P    +    G 
Sbjct: 2217 LDREK-TPTYF-LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGT 2274

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
                I+++ A D+D G N++I+Y ++  +            SG +  T  L     E + 
Sbjct: 2275 LPSTILQVLARDDDQGSNSQISYVLFGGNEDNAFTLS---ASGELRVTQSLDRETKEHFV 2331

Query: 124  ITVQATDTGGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +TV ATD+G  +      ++ +V   N   P F    Y   + E A   + V  +  S
Sbjct: 2332 LTVTATDSGSPALTGTGTINIIVDDVNDNVPTFASKRYFTTIPEDAPTGTDVLLVNAS 2389


>gi|341899515|gb|EGT55450.1| hypothetical protein CAEBREN_29330 [Caenorhabditis brenneri]
          Length = 2586

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 20/165 (12%)

Query: 24  IAREKQGT--AASVPVSLTVNLNDINDNAPRL----PMIPPIQ-IQAGEARRQIVKIEAT 76
           + R K G   A S  V LT+N+ DIND+AP L     MI   + +  GE   ++ ++ A 
Sbjct: 438 VIRAKDGAQPALSSTVPLTINVVDINDHAPTLIAAQKMITLEENVAIGE---EVGRVYAI 494

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
           D D G N  I YS+      G   F ID  SGV++TT KL+  E   +YS+ V A D G 
Sbjct: 495 DEDSGPNGIIRYSM-----EGSEDFIIDEDSGVLKTT-KLLDRETVARYSLKVTARDMGT 548

Query: 134 KSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               T   ++VV    N  +P+F +  Y+V +SE     S + T+
Sbjct: 549 PPLNTSTTITVVLKDINDNAPIFDKKEYNVTISEEMPRGSQIITL 593



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 14/178 (7%)

Query: 10  DRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAG 64
           D D  +   F   V A +      +    + V L+DINDNAP+             I  G
Sbjct: 731 DLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNAPQFTSSSYAATISEDIPVG 790

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAGEQYS 123
            +    +++ A D D+G N  + Y +   S++  +  FR+D  SG +  + KL   EQ++
Sbjct: 791 TS---FLQVSAIDADIGPNGIVDYFLNESSSSPAIQLFRLDRTSGTLRVSSKL-DREQFA 846

Query: 124 ITVQ---ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + V    A D G  S     E+++ +   N  +P F+Q +YD+ ++E A I STV TI
Sbjct: 847 VIVLPIFARDRGNPSLSAASEITLTLSDVNDNAPAFEQLSYDLYIAENAPIGSTVGTI 904



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 21/182 (11%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           +++DR+  +  K   +V A E+     S   ++ V++ D+ DN+P    I       GE 
Sbjct: 216 KSMDREVLD--KHILKVTAYERVDPTISASTTVVVHVLDVQDNSP----IFEKDSYFGEI 269

Query: 67  RRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           R        ++ + A D D G N EI YS+   +   L    I+ +SGVI+T   L   E
Sbjct: 270 REDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKSL--LAINSKSGVIQTAAPL-DRE 326

Query: 121 QYSIT---VQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             S+    V A+D G   + S  +VE++V+   N  +PVF  ++Y+V + E  ++ + +A
Sbjct: 327 TLSLIRLDVIASDKGVPKRESSALVEITVL-DVNDNAPVFASDSYNVTILENITLPAVIA 385

Query: 176 TI 177
           T+
Sbjct: 386 TV 387



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 9/172 (5%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     ++  +V AR+      +   ++TV L DINDNAP           + E  R
Sbjct: 529 LDRE--TVARYSLKVTARDMGTPPLNTSTTITVVLKDINDNAPIFDKKEYNVTISEEMPR 586

Query: 69  --QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSIT 125
             QI+ ++A DND   + +ITY I            I  +  ++  +G+L     +  + 
Sbjct: 587 GSQIITLKAVDND--EDQKITYRIEESDRDVFSILDIGDQGAILSVSGELNRQDHKIRVE 644

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + ATD GG   + +V V  +   N+ +P F  + + V + E + I   V T+
Sbjct: 645 ISATDQGGLQGRCVVNV-FIDDVNS-APYFTDHLFSVKIPEHSPIGFPVITL 694



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ ++A D+D G NA + YSI          F+ID  SG I     L   ++  +S+ V 
Sbjct: 691 VITLKAEDHDRGDNARLIYSI-----DSTQFFKIDSASGDISVAADLDREDRATFSVIVT 745

Query: 128 ATDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           A+D       T  ++ V+    N  +P F  ++Y   +SE   + ++   ++
Sbjct: 746 ASDHASPPLNTSTQIEVILDDINDNAPQFTSSSYAATISEDIPVGTSFLQVS 797


>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
 gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
          Length = 814

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQIQAGEA-RRQIVKIEAT 76
           + F+V A +      +   S+ + + D+NDN P  LP    +Q+    A    + ++ A+
Sbjct: 567 YSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTPVTQVTAS 626

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
           D D  +N ++ +SI   ++ G  KF ID  +GV+ TT K +  E   +Y++ +QATD G 
Sbjct: 627 DLDSSLNGKVLFSILGGNSDG--KFVIDQNTGVV-TTNKSLDYEDVTEYTLVIQATDCGD 683

Query: 134 ---KSSQ-TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               SSQ  ++ VSVV   N  SPVF Q  Y  ++ E  ++   +  +T S L S  
Sbjct: 684 PPLNSSQPGMLHVSVV-NINDNSPVFSQKMYSASIDENTTVGHVILRVTASDLDSSL 739



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 9/180 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEAT 76
           + F V A ++     S   ++ V + D NDN P   PM    ++        IV +++A 
Sbjct: 75  YSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAV 134

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-- 132
           D D   NA++ YSI + +N G   F ID  +G I T  +      E+Y++T+  +DTG  
Sbjct: 135 DKDSTSNADLIYSIQNGNNNG--SFTIDNSTGEIMTRKEFDFEKTERYNLTISVSDTGVP 192

Query: 133 GKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNK 191
             SS     V  +V   N   P F Q  Y   V E  ++ + V  +T     SG   M K
Sbjct: 193 ALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLK 252



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           ++ + A D D  +NA +TYSI   S T    F ID  +GV+ ++ +     Q  YS +V+
Sbjct: 22  LLTVLARDQDAALNARVTYSIVSFS-TESDYFVIDNITGVVRSSKEFDYETQRMYSFSVR 80

Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           A D G      I  + V +   N   P+FQ   Y+  VSE   + + VA +
Sbjct: 81  AEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARV 131



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 13/131 (9%)

Query: 33  ASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           +S P  L V++ +INDN+P     M      +       I+++ A+D D  +N ++ +SI
Sbjct: 688 SSQPGMLHVSVVNINDNSPVFSQKMYSASIDENTTVGHVILRVTASDLDSSLNGKVLFSI 747

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG---KSSQ-TIVEVS 143
              ++ G  KF +D  +GV+ TT K +  E   +Y++ +QATD G     SSQ  ++ VS
Sbjct: 748 LEGNSDG--KFVVDQNTGVV-TTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVS 804

Query: 144 VVPGPNTRSPV 154
           VV   N  SPV
Sbjct: 805 VV-NINDNSPV 814



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 24/192 (12%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+  +  ++   V+A++      +    + V + D NDN P    +    +Q  EA  
Sbjct: 451 LDRE--SVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLY-YTLQLSEATS 507

Query: 69  ---QIVKIEATD---NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
              +I+++ A D    D GVNAEI Y +     +   KF I+  +G I T  + +  E+ 
Sbjct: 508 IGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVS--KKFSINDTTGQI-TIKQAVDYEER 564

Query: 122 --YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             YS  V A+D G     G SS  I  + V    N   P F    Y V + E  +I + V
Sbjct: 565 SSYSFEVFASDGGEARLTGSSSVRITIIDV----NDNRPYFLPTRYYVQLVENVAIGTPV 620

Query: 175 ATITVSRLASGC 186
             +T S L S  
Sbjct: 621 TQVTASDLDSSL 632



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           Q++ + A D D G+N ++ Y I   S  G+  F  +  +GV+  T +L   +  QY++ V
Sbjct: 406 QVLTLFAHDRDEGINGQVFYYIVTSSVKGV--FTTNSTTGVVSLTAELDRESVYQYNMLV 463

Query: 127 QATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G   +++   V+V V+   N   PVF    Y + +SE  SI + +  ++
Sbjct: 464 VAQDGGSPPRTASAHVKVEVLDC-NDNPPVFTTLYYTLQLSEATSIGTRILRVS 516


>gi|449504736|ref|XP_004176434.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Taeniopygia guttata]
          Length = 3375

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 11/192 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            LV S   LDR+     ++  +V+A +    A S   +LTV + D+ND  P   P +  + 
Sbjct: 957  LVTSTAVLDRE--RIPEYFLRVVASDAGTPAKSSTSTLTVKVLDVNDENPTFFPAVYNVS 1014

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +    AR  ++V++  TD D+G+NAE++Y I   +  G  KF +  R GV+ T   L   
Sbjct: 1015 LPEDVARDFKVVRLNCTDADIGLNAELSYFITGGNQDG--KFSVGFRDGVVRTVVSLDRE 1072

Query: 120  --EQYSITVQATD---TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y++ ++A D   +G + + T      V   N   P+F Q++Y+V+V E     S++
Sbjct: 1073 TVASYTLILEAIDNGPSGNRRTGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSI 1132

Query: 175  ATITVSRLASGC 186
              +  +    G 
Sbjct: 1133 VQVKATDADEGI 1144



 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 12/148 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L VN+ D+NDN P +       +   E       + ++ ATD D+G+N+ ++Y I    N
Sbjct: 1524 LRVNILDVNDNPPVIDSPFGYNVSVSENVGGGTAVAQVRATDRDIGLNSVLSYYITR-GN 1582

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
              L  FR+D  +G I T       E+   YS+ V   D G    S+ T V V+++   N 
Sbjct: 1583 EDL-TFRMDRVTGEIATRPSPPDRERQSFYSLVVTVEDEGNPSLSATTTVYVTIL-DEND 1640

Query: 151  RSPVFQQNTYDVNVSEGAS-INSTVATI 177
             +P F+Q  Y+V + EG S +N+++ T+
Sbjct: 1641 NAPAFRQQLYEVTLDEGPSTLNASLVTV 1668



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 24/177 (13%)

Query: 25   AREKQGTAASVP-VSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDN 78
            A E    + SVP   LTVN+ D+NDN PR             ++       ++ I A D 
Sbjct: 2275 ASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDP 2334

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATD 130
            D G N +ITY + ++S  G              + GK++A         +  + TV+A+D
Sbjct: 2335 DKGANGQITYELLNLSPEGYACLE-------DHSAGKVVANRTVDYEEVQWLNFTVRASD 2387

Query: 131  TGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             G   +S++  V + +V   N  +PVF   +Y   V E   + + + ++T +   SG
Sbjct: 2388 NGSPRRSAEIPVYLQIV-DINDNNPVFSHPSYQKAVFEDVPLGTVILSVTATDADSG 2443



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 11/185 (5%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+         + I     G   +   ++ V + D+NDN P + +    ++   E   
Sbjct: 1069 LDRETVASYTLILEAIDNGPSGNRRTGTATVYVTVLDVNDNRP-IFLQSSYEVSVPEDIP 1127

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS-- 123
            A   IV+++ATD D G+N  + Y I  V     + FRI+P +G++    + +  EQ S  
Sbjct: 1128 AASSIVQVKATDADEGINGRVWYRI--VKGNEHNHFRINPSTGLVMRGVRHLDREQNSSH 1185

Query: 124  -ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
             + V+A +T     ++ V V V V   N   PVF Q  Y+ + + E A I ++VA +  +
Sbjct: 1186 VLEVEAYNTEQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRAT 1245

Query: 181  RLASG 185
               +G
Sbjct: 1246 DRDTG 1250



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            +DR+        F ++AR+  G  ++   SL V + D NDN P   +  P  I A     
Sbjct: 2038 IDREALLDPHLEFTLVARDVGGLNSTA--SLAVTILDDNDNRP---VFQPASITAWLLEN 2092

Query: 69   Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  ++++ ATD D G+N ++ Y I      G  +F ID  +GVI      I  E+  
Sbjct: 2093 SPPGFSVLQVTATDADSGLNQQLDYRI---EGGGQDRFLIDATTGVIRVANITIDREERD 2149

Query: 122  -YSITVQATDTGGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV A D G  +      VS V+   N   P F      V++ E A   + VA +T
Sbjct: 2150 AYRLTVVAVDQGTPALSGTATVSIVIDDINDCRPEFINPIQTVSIPESAPPGTVVAEVT 2208



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 16/163 (9%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDL 80
            +++R    TA     ++ VNLNDINDN P    P   P  +  G+   ++    A D D 
Sbjct: 1730 IVSRRLTSTA-----TVLVNLNDINDNCPTFPRPYEGPFDVTEGQPGPRVWTFLAHDGDS 1784

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GK 134
            G + ++ YSI  ++   L +F I P  G +          +    Y++T+ A D G    
Sbjct: 1785 GPSGQVEYSI--IAGDPLGEFVISPVEGELRVRKDAELDRENFPFYNLTIAAQDRGVPPL 1842

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            SS  +V V V+   N   PV      ++ +SE A+++S V  +
Sbjct: 1843 SSTILVGVRVL-DINDNDPVLLNLPMNLTLSENAAVSSFVTRV 1884



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 14/155 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRLP--MIPPIQIQ 62
            LDR+  +   +    +AR+  G  +S      V + + + DIND  P+           +
Sbjct: 2474 LDREKKD--HYTLTAVARDNPGDVSSNRRENSVQVLITVLDINDVRPQFSKSQFSTSVYE 2531

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
               A   ++ + ATD D G N  +TYSI      G   F+I+  SG++ +  +L + E++
Sbjct: 2532 NEPAGTSVITMSATDLDEGDNGVVTYSI---EGPGAEAFKINKDSGLVTSRRRLQSYERF 2588

Query: 123  SITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVF 155
            ++TV ATD G       T++ + V+   N   PVF
Sbjct: 2589 NLTVVATDKGHPPLWGTTMLHIEVI-DINDNRPVF 2622



 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           ++++ ATDND+G   +++Y      +    +F +D  +GVI  T +L     ++Y++TV 
Sbjct: 490 VLQVHATDNDVGTYGKVSYFF----SDDPDRFSLDKDTGVIILTARLDFETTQRYTLTVI 545

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ+  Y
Sbjct: 546 ARDGGGEETTGRVRINVL-DVNDNVPTFQKEAY 577



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAG-EARRQIVKI 73
            +F   V+A +K          L + + DINDN P   R P    + I+     R  + ++
Sbjct: 2587 RFNLTVVATDKGHPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKEEIPLRSNVYEV 2646

Query: 74   EATDNDLGVNAEITYSIYH--VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
             ATD D G+N  + Y++      N     F ID  SG+I+T  +L   +Q  Y++ + A 
Sbjct: 2647 YATDKDEGLNGVVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMRLDREKQAVYNLIIVAC 2706

Query: 130  DTGGKSSQTI 139
            D G    +T+
Sbjct: 2707 DQGQPPYETM 2716



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 25/175 (14%)

Query: 9    LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAP---RLPMIPPI 59
            LDR+ PN  +    R  V++    G     A+   ++ VNL D+NDN P    LP +  I
Sbjct: 851  LDRENPNAQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEI 910

Query: 60   Q--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGK 115
               + AG +  Q+V I   D D G N +++Y +      G+ +  F I+   G++ +T  
Sbjct: 911  AEGLPAGSSVFQVVAI---DLDEGPNGQVSYRM----QVGMPRMDFLINSTGGLVTSTAV 963

Query: 116  LIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L      +Y + V A+D G   KSS + + V V+   N  +P F    Y+V++ E
Sbjct: 964  LDRERIPEYFLRVVASDAGTPAKSSTSTLTVKVL-DVNDENPTFFPAVYNVSLPE 1017



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 13/185 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +++    LD +    G     V+A++      +  V +T+ + D NDN P     P   I
Sbjct: 631 VIIVNHPLDYEQVANGVIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSK-PSYVI 689

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
              E   A   ++ + ATD D          IY +   G   FRI+ RSG I TT  L  
Sbjct: 690 AVMEDIMAGATVLFLNATDMDRSREYGQESIIYSLE--GSSHFRINARSGEITTTSLLDR 747

Query: 118 -AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            A  +Y + V+A D G     K+   +V ++++   N   P ++   Y +N+ E    NS
Sbjct: 748 EAKSEYILIVRAVDGGVGHHQKTGIAMVNITLL-DINDNYPTWKDEPYFINLVEMTPPNS 806

Query: 173 TVATI 177
            V T+
Sbjct: 807 DVTTV 811



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 11/127 (8%)

Query: 13   PPNPGKFRFQ--VIAREKQGT-AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEA-- 66
            PP+  +  F   V+  E +G  + S   ++ V + D NDNAP     +  + +  G +  
Sbjct: 1602 PPDRERQSFYSLVVTVEDEGNPSLSATTTVYVTILDENDNAPAFRQQLYEVTLDEGPSTL 1661

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYS 123
               +V ++A D D G N ++ Y+I       L  FRID  +G I T  +L   I+  +Y+
Sbjct: 1662 NASLVTVQALDQDEGPNGKVAYAI--TEGNILGTFRIDNATGEIRTVKELDYEISHGRYT 1719

Query: 124  ITVQATD 130
            + V ATD
Sbjct: 1720 LIVTATD 1726



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 17/164 (10%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITY 88
            +A +PV L +   DINDN P     P  Q    E       I+ + ATD D G  A I Y
Sbjct: 2394 SAEIPVYLQIV--DINDNNPVFSH-PSYQKAVFEDVPLGTVILSVTATDADSGQFALIQY 2450

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-- 144
            S+      G  KF I+P +G I     L     + Y++T  A D  G  S    E SV  
Sbjct: 2451 SL----GDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARDNPGDVSSNRRENSVQV 2506

Query: 145  ---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               V   N   P F ++ +  +V E     ++V T++ + L  G
Sbjct: 2507 LITVLDINDVRPQFSKSQFSTSVYENEPAGTSVITMSATDLDEG 2550



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA--GEARR------Q 69
           ++   VIAR+  G   +  V   +N+ D+NDN      +P  Q +A  G  R       Q
Sbjct: 539 RYTLTVIARDGGGEETTGRVR--INVLDVNDN------VPTFQKEAYLGALRENEPSVTQ 590

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
           +V++ A+D D   N +I+YSI   S         +    GVI     L    +A     +
Sbjct: 591 VVRLRASDEDSPPNNQISYSIVQASAFRDYFDITMSEGYGVIIVNHPLDYEQVANGVIYL 650

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           TV A D G     + V V++ V   N   P F + +Y + V E     +TV  +  + +
Sbjct: 651 TVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYVIAVMEDIMAGATVLFLNATDM 709



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGE-----QYSITV 126
            I A D D G+NA +TY +   S   L  F I+ ++GV+    G +I  E         T+
Sbjct: 1996 ILALDADQGINAVVTYELLKAS---LDLFVINNKTGVVSVKPGGVIDREALLDPHLEFTL 2052

Query: 127  QATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             A D GG +S   + V+++   + R PVFQ  +    + E +    +V  +T +   SG 
Sbjct: 2053 VARDVGGLNSTASLAVTILDDNDNR-PVFQPASITAWLLENSPPGFSVLQVTATDADSGL 2111



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 23/190 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            ++  K  +DR+    G F    +  +  G      V +T+ + D NDN+P+  +     +
Sbjct: 1381 VITVKGQVDREK---GDFYTLTVVADDGGPKIDSTVKVTITVLDENDNSPQFDITSDSSV 1437

Query: 62   QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               E     +++  + A D D G N ++T+S+    N G   F I   +G   T G++  
Sbjct: 1438 SVAEDSAVGKRVALVLARDPDAGRNGQVTFSLTS-GNIG-RAFEIRTTNG---TYGEVFV 1492

Query: 119  G--------EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQ-NTYDVNVSEG 167
                     + Y++ +QA+D G   +  + ++ V+++   N   PV      Y+V+VSE 
Sbjct: 1493 ARPLDRELLDHYTLRIQASDGGVPPRRKEHVLRVNIL-DVNDNPPVIDSPFGYNVSVSEN 1551

Query: 168  ASINSTVATI 177
                + VA +
Sbjct: 1552 VGGGTAVAQV 1561


>gi|440896003|gb|ELR48045.1| Protocadherin-16 [Bos grunniens mutus]
          Length = 3188

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 20/196 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 420 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 477

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T    F IDP SG++ TT
Sbjct: 478 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--RWFSIDPTSGIV-TT 530

Query: 114 GKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGAS 169
             L+  E   Q  + V ATD G     +   VSVV    N   P FQ+  Y+ ++ EG  
Sbjct: 531 AALLDYELEPQPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQ 590

Query: 170 INSTVATITVSRLASG 185
             +    +T +   SG
Sbjct: 591 PGTCFLQVTATDADSG 606



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E   A   +++++A
Sbjct: 1711 FQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPSYSVEVPEDAPAGTLLLQLQA 1769

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT-- 131
             D D G N  +T   Y++       F ++P SG + T   L   +   Y+ TV A D+  
Sbjct: 1770 HDPDAGANGRVT---YYLGTGAAGAFLLEPSSGELRTATTLDREQCPSYAFTVNAVDSAA 1826

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             G  S T+     V   N  +P F  +   + +     + ST
Sbjct: 1827 AGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFST 1868



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 74/170 (43%), Gaps = 22/170 (12%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+     ++   V+A +      S    LTV++ D+ND AP        Q +     
Sbjct: 1496 SLDRE--QRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAF-----QQQEYSVLL 1548

Query: 68   RQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            R+       ++ ++ATD DLG N ++TY      N     F +DP +GV+ T   L   E
Sbjct: 1549 RENSPPGTSLLTLQATDPDLGANGQVTYGGISGEN-----FSLDPDTGVLTTLRALDREE 1603

Query: 121  QYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
            Q  I  TV A D G     T V V V V   N  +P F      + V EG
Sbjct: 1604 QEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEG 1653



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 22/197 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            V S E LD +  NP   R +++ + + G A +  V LT+ L D NDNAPR   P      
Sbjct: 2016 VRSAEGLDFEA-NP---RLRLVLQAESGGAYAFSV-LTLTLQDANDNAPRFLQPHYVAFL 2070

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---I 117
             ++      ++++EA D D G + +I+YS+   S      F +DP +G I TT  L   I
Sbjct: 2071 PESRPLEGPLLQVEADDLDQGPSGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREI 2129

Query: 118  AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              E   + + ATD G     G ++ T++ +      N   P   Q  +++ VSE A + S
Sbjct: 2130 WAET-RLVLMATDRGSPALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGS 2183

Query: 173  TVATITVSRLASGCAIM 189
             +A +T + + SG  + 
Sbjct: 2184 EIAQVTGNDVDSGPVLW 2200



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
            ++  Q++A +   +G A     +LTV + D+NDN+P     +   + ++       I+ +
Sbjct: 2234 RYHLQLLAHDGPHEGRA-----NLTVFVEDVNDNSPAFSQTLYQVMLLEHTPPGSAILSV 2288

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  ++   YH++++    F IDP +G + TT G +  G +      + ++A
Sbjct: 2289 SATDRDSGANGHVS---YHLASSA-EGFSIDPNNGTLFTTVGTVALGHEGPGMVDVVLEA 2344

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   ++++  V V +    N  +P F    Y V V+E     ST+ T+
Sbjct: 2345 RDHGVPVRAARATVHVQLQ-DQNDHAPSFTLPHYRVAVTEDLPPGSTLLTL 2394



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 26/155 (16%)

Query: 21   FQVIAREKQGT---------AASVPVSLTVNLN----DINDNAPRLPMIP-------PIQ 60
             Q + RE+Q +         A S P S T  ++    D+NDN+P             PIQ
Sbjct: 1164 LQTLDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ 1223

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +  G     +V  ++A D D G N  I   +Y ++  G   F + P SG + T   LI  
Sbjct: 1224 VPDGVPPGTLVTTLQAKDPDEGENGTI---LYMLTGPGSELFSLHPHSGELLTAAPLIRA 1280

Query: 120  E--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
            E   Y +T+ A D G     + +++ V   P+TRS
Sbjct: 1281 ERPHYVLTLSAHDQGSPPRSSSLQLLVQVLPSTRS 1315



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 47   NDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND++PRL   P     A        + ++ ATD D G+N  +TYS+  +S      FRI 
Sbjct: 1097 NDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGINGRLTYSLRQLSEDS-KAFRIH 1155

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
            P++G + T   L    Q  Y + VQ  D G   +S+   V ++V+   N  SP F Q
Sbjct: 1156 PQTGEVTTLQTLDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVL-DLNDNSPTFLQ 1211



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LVV+ E LDR+  N   +  Q+ A +           L V L DIND+AP     R    
Sbjct: 205 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAA 261

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G++     L
Sbjct: 262 VSESLSPGSP---VLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPL 318

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 319 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 378

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 379 PGQLVARISVS 389



 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P    + QI
Sbjct: 104 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAVLQI 150

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGV-------IET 112
               A      +E A D D G    +    Y +S  G  + FR++ R G        +  
Sbjct: 151 PEHTALGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGAPVPELVV 207

Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           TG+L       Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 208 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAAVSESL 266

Query: 169 SINSTVATITVSRLASGC 186
           S  S V  +  S   +G 
Sbjct: 267 SPGSPVLQVYASDADAGA 284



 Score = 40.8 bits (94), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 20   RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
            R Q++ +      A   ++ +T+ + D+ND+ P  P+     +    A  Q     +  +
Sbjct: 2562 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLS---LLSTSLAENQPPGTLVTTL 2618

Query: 74   EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVI--------ETTGKLIAGEQYS 123
             A D D G    + YS+        G   F ++  +G +        E TG       + 
Sbjct: 2619 HAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTGS------FQ 2672

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + V ATD G  S+   V V +V G +   PVF    +   V EGA
Sbjct: 2673 LLVGATDAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2716



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 21/186 (11%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGT---------AASVP----VSLTVNLNDIN 47
            Y  +S EN   DP        + + RE+Q             S P    V++ V + D N
Sbjct: 1576 YGGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDEN 1635

Query: 48   DNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR 106
            D+AP        +++  G+  + +  + A+D D+G N ++ Y I     +G   F +D  
Sbjct: 1636 DHAPAFGSAHLSLEVPEGQDPQTLTTLRASDPDVGANGQLQYRILDGDPSG--AFVLDLA 1693

Query: 107  SGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
            SG   T   L       + + ++A D G    S+  +V V+V+   N  +P F   +Y V
Sbjct: 1694 SGEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDA-NDHAPAFPVPSYSV 1752

Query: 163  NVSEGA 168
             V E A
Sbjct: 1753 EVPEDA 1758



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 16/147 (10%)

Query: 41   VNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            V L+D+NDN+P  P     ++ P     G     I  + A D D GVN+ +T+++     
Sbjct: 880  VLLDDVNDNSPAFPAPEDTVLLPSSTAPGTL---IYTLRALDPDSGVNSRVTFTLL---A 933

Query: 96   TGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPNT 150
             G   F +DP +G I          G  + + ++A D G     +   + VV    G   
Sbjct: 934  GGGGTFTVDPTTGHIRLMGPLGPPGGPAHELELEARDGGSPPRTSHFHLRVVVQDLGTRG 993

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F   TY V++  G +  + V  +
Sbjct: 994  LAPHFDSPTYRVDLPSGTTPGTQVVQV 1020



 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 26/174 (14%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAG---------EARR 68
            ++   V A ++     S  V +TV++ D+NDN       PP+  +A              
Sbjct: 2457 QYNLTVAATDRGQPPRSSAVPVTVSVLDVNDN-------PPVFTRAAYRVAVPEDTPVGA 2509

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
            +++ +EA+D D G +  + +++      GL  F +D  SG +     L    Q  + + V
Sbjct: 2510 ELLHVEASDADPGPHGLVRFTLSSGDPLGL--FELDESSGDLRLARPLDCETQARHQLVV 2567

Query: 127  QATDTGGKS---SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            QA D  G     +   +EV  V   N   P F  +    +++E     + V T+
Sbjct: 2568 QAADPAGAHFALAPVTIEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2618


>gi|2982187|gb|AAC06341.1| G-cadherin [Lytechinus variegatus]
          Length = 2809

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 19/192 (9%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ 60
            + +    DR+ P P ++  +V A +   TA++   ++T++++D++DN P     + P   
Sbjct: 1446 ITTARQFDRETP-PSEYEIEVQATDGVNTAST---TVTISIDDVDDNKPSFSEDVYPDAS 1501

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS--GVIETTGKL- 116
            +   E     I  ++A D D+     + +SI       L +   D  +  G+I+   +L 
Sbjct: 1502 VLETEPIGTTITTVQAIDPDVDFRDAVEFSINSGDPDELFRIVADAATLQGLIQVNKELD 1561

Query: 117  ---IAGEQYSITVQATDT-----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
               +A  ++++TV  TD+      G+    IV++ +V   N  +PVF Q+ YD  VSE A
Sbjct: 1562 FETLATNEFTLTVAVTDSQGPTDSGRPETAIVKI-IVENANDLAPVFDQDVYDGAVSEDA 1620

Query: 169  SINSTVATITVS 180
            ++NS V T T S
Sbjct: 1621 TVNSQVGTFTFS 1632



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 14/175 (8%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
            + F+V+A ++ G +A    S+ V+  D+NDN P  P          E       I+ + 
Sbjct: 727 SYTFEVVATDQTGNSAMA--SVQVSFTDLNDNIPTFPNCGSYSGTVAEDAAIDTSIITVS 784

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATD 130
           A+D D G NAE+TY +   SNT  ++ F++D + G+I TT KL+  E    + +TV+A D
Sbjct: 785 ASDLDQGSNAEVTYQL--ASNTDANQVFKVD-QDGLI-TTKKLLDREDTSSFVVTVEAED 840

Query: 131 TGGKSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            G  S       S VV   +   P F    Y  +V   A  NS V ++    L S
Sbjct: 841 GGNPSLTGFCTFSVVVTDVDDNYPEFPFTDYKASVLSDAPSNSEVVSVPADDLDS 895



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 73/169 (43%), Gaps = 10/169 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV-KIE 74
            +   V A E+ G   S  V + V + DIN+  P     ++    +    A  + V ++ 
Sbjct: 526 SYFLIVRATEQGGNQLSSDVRVNVMIEDINNCVPTFGQEILSFNDVSETTAIGEPVGEVT 585

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDT 131
           ATD D+GVNAE+TYSI    N+G   F I P  GVI     L   E    Y+  V ATD 
Sbjct: 586 ATDCDVGVNAELTYSI-TTPNSG---FTIGPDDGVISPAVILDYEEGERYYTFVVAATDG 641

Query: 132 GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           G   +     V +       +P F   +Y   V E A +   V T+  S
Sbjct: 642 GSPPTSGTATVVISIANAEEAPYFTPTSYSFRVDETAQVGYEVGTVYAS 690



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 24/170 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IVK 72
            +    +A +  G   +  V +T+ + DINDNAP  P     Q   G           +V 
Sbjct: 1359 YNLAAVATDDNGNGLTSYVDVTIEVEDINDNAPVFPD----QEYVGSVEENRPPNTPVVA 1414

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE----QYSITVQA 128
            + A D D     ++ YS      T    F I+ ++G I TT +    E    +Y I VQA
Sbjct: 1415 VVAEDPDTA--DDLMYSF----PTPSPDFNINSQTGQI-TTARQFDRETPPSEYEIEVQA 1467

Query: 129  TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY-DVNVSEGASINSTVATI 177
            TD G  ++ T V +S +   +   P F ++ Y D +V E   I +T+ T+
Sbjct: 1468 TD-GVNTASTTVTIS-IDDVDDNKPSFSEDVYPDASVLETEPIGTTITTV 1515



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           L+ +K+ LDR+  +   F   V A +    + +   + +V + D++DN P  P       
Sbjct: 817 LITTKKLLDRE--DTSSFVVTVEAEDGGNPSLTGFCTFSVVVTDVDDNYPEFPFTDYKAS 874

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--I 117
            +    +  ++V + A  +DL  ++ + Y +          F + P   VI T G L  I
Sbjct: 875 VLSDAPSNSEVVSVPA--DDLDSSSTLQYDLASSQEECRRYFTMSPADPVIITRGDLSAI 932

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT--RSPVFQQNTYDVNVSEGASINSTVA 175
           +    S  V A+D G + S+  V++ V    +T  + P F    Y V ++E  +I   + 
Sbjct: 933 SNNDVSCIVTASD-GIRESRVDVDIFVRSPDDTTYQVPTFSNTPYQVTINENTTIGDVIL 991

Query: 176 TITV 179
            ++V
Sbjct: 992 LVSV 995


>gi|350581217|ref|XP_003124073.3| PREDICTED: protocadherin gamma-B5-like [Sus scrofa]
          Length = 700

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 5/158 (3%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYS 89
           A S    + V + D NDN P     +  +++Q        ++++ ATD D G+NAEITY+
Sbjct: 221 ARSCSTQIRVVVADANDNPPVFTQDLYRVRVQENLPLGSSLLRVMATDLDEGINAEITYT 280

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
             +V       F++D ++G + T GKL   E+  Y+I V+A D G  ++   +++ ++  
Sbjct: 281 FINVGKAVRQLFKLDSKTGELTTGGKLDFEERESYTIGVEAKDGGHHTAHCKIQIDIL-D 339

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P    ++    + E A + + VA I    L SG
Sbjct: 340 ENDNAPEITLDSESKYIQEDAELGTVVALIKTHDLDSG 377



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 23/172 (13%)

Query: 17  GKFRFQ------VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI--QAGEARR 68
           GK  F+      +    K G   +    + +++ D NDNAP + +    +   +  E   
Sbjct: 305 GKLDFEERESYTIGVEAKDGGHHTAHCKIQIDILDENDNAPEITLDSESKYIQEDAELGT 364

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI--DPRSGVIETTGKLIAGEQ---YS 123
            +  I+  D D G N EI   +      G   F I  D R+     T  ++  EQ   Y+
Sbjct: 365 VVALIKTHDLDSGFNGEILCQL-----KGNFPFTIVQDTRNTYKLVTDGVLDREQTPEYN 419

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASI 170
           +T+ ATD G     T   +++ +   N  +PVF   +Y+V+V+E    GASI
Sbjct: 420 VTITATDRGKPPLSTSTTITLHIADVNDNAPVFPAASYEVHVAENNPPGASI 471



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 31/166 (18%)

Query: 39  LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNT 96
           +TV + D+NDN+P     +  ++I           +E A D+D+GVN   +   YH+S  
Sbjct: 119 VTVEIQDVNDNSPTFSRNVTELEISEMALTGATFALESAQDSDVGVN---SLQQYHLSP- 174

Query: 97  GLHKFRIDPRSGVIE-------------TTGKLIAGEQ--YSITVQATDTG--GKSSQTI 139
                  DP   +I+                 L   E+  + + + A D G   +S  T 
Sbjct: 175 -------DPHFSLIQKENPDGSRYPELVVKAPLDREEKSCHHLVLTAVDGGEPARSCSTQ 227

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           + V VV   N   PVF Q+ Y V V E   + S++  +  + L  G
Sbjct: 228 IRV-VVADANDNPPVFTQDLYRVRVQENLPLGSSLLRVMATDLDEG 272


>gi|78706950|ref|NP_001027280.1| Cadherin-N, isoform I [Drosophila melanogaster]
 gi|72151392|gb|AAZ66474.1| Cadherin-N, isoform I [Drosophila melanogaster]
          Length = 3100

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1588 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1647

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1648 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1707

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1708 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1766

Query: 174  VATITV 179
            + T+TV
Sbjct: 1767 ILTVTV 1772



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG----EQYSITVQA 128
             A+D D   N  I YS+    N   L  F I   SG I    K + G    ++Y + V A
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDGCYPRDRYRLRVSA 1159

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
            +D G  +S   V+V +     N + P++ ++ Y
Sbjct: 1160 SDKGTPASAADVDVELDVVDRNNKPPIWDKSIY 1192


>gi|24584877|ref|NP_724073.1| Cadherin-N, isoform A [Drosophila melanogaster]
 gi|22946727|gb|AAN10996.1| Cadherin-N, isoform A [Drosophila melanogaster]
          Length = 3096

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1584 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1643

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1644 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1703

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1704 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1752



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V A+D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRDRYRLRVSASDKG 1159

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
              +S   V+V +     N + P++ ++ Y
Sbjct: 1160 TPASAADVDVELDVVDRNNKPPIWDKSIY 1188


>gi|24584869|ref|NP_724069.1| Cadherin-N, isoform B [Drosophila melanogaster]
 gi|22946724|gb|AAN10993.1| Cadherin-N, isoform B [Drosophila melanogaster]
          Length = 3096

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1584 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1643

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1644 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1703

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1704 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1762

Query: 174  VATITV 179
            + T+TV
Sbjct: 1763 ILTVTV 1768



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|327270385|ref|XP_003219970.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
          Length = 822

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 7/188 (3%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           +V K+ LD +  +   F   ++A +   +  +  V + + + D+NDN+P     +  + +
Sbjct: 198 LVLKKQLDHE--SESIFHLTLMALDGGKSPKTGTVKIWITVIDVNDNSPVFSQELYTVNL 255

Query: 62  QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIA 118
           +    RR  +V+++ATD D G N ++TY+  ++      KF +D + G   I+       
Sbjct: 256 KENTPRRSLVVQVKATDKDAGSNGQVTYNFRNIPERARQKFSLDSKDGKITIKEALDFEE 315

Query: 119 GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            E+Y + V+A D GG ++ + VE+ V+   N  +P     +    + E ++  + VA I 
Sbjct: 316 SERYLVAVEARDGGGLATHSKVEIKVL-DENDNAPEVVLASLSSPIPEDSATGTLVALIN 374

Query: 179 VSRLASGC 186
           +    SG 
Sbjct: 375 IKDRDSGA 382



 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 27/162 (16%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSI----YHV 93
           V + D+NDNAP   +   I+++  E        +  +A D D+G+N    YS+    Y V
Sbjct: 125 VEVQDVNDNAPYF-LHGDIKLEISELTLPGATFLLEQAEDPDIGMNTIQNYSLDTNQYFV 183

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--------YSITVQATDTGGKSSQT-IVEVSV 144
            +        + +SG  +T  KL+  +Q        + +T+ A D GGKS +T  V++ +
Sbjct: 184 LDM------TERQSG--KTYVKLVLKKQLDHESESIFHLTLMALD-GGKSPKTGTVKIWI 234

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V   N  SPVF Q  Y VN+ E     S V  +  +   +G
Sbjct: 235 TVIDVNDNSPVFSQELYTVNLKENTPRRSLVVQVKATDKDAG 276


>gi|195436718|ref|XP_002066304.1| GK18219 [Drosophila willistoni]
 gi|194162389|gb|EDW77290.1| GK18219 [Drosophila willistoni]
          Length = 3304

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1706 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1765

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1766 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1825

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1826 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1884

Query: 174  VATITV 179
            + T+TV
Sbjct: 1885 ILTVTV 1890



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++  A      ++K+ ATD+D GVN ++ YSI    
Sbjct: 969  VVVFITDVNDNKPVFKDCGTYYPKVEEGAPNGS-PVIKVVATDDDKGVNGQVKYSIVQQP 1027

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1028 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1086

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1087 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1118



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 79/186 (42%), Gaps = 19/186 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 723 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 780

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++ATD D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 781 VDEDIPLGTSILRVKATDADSGANAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 833

Query: 120 EQ---YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y   V A D G   KS    V V      N   P F Q  Y  NV E A  N+ V
Sbjct: 834 NNNAYYEFIVTAKDKGEPAKSGTATVRV-YTKNKNDEEPKFSQQVYTPNVDENAGPNTLV 892

Query: 175 ATITVS 180
            T+  S
Sbjct: 893 TTVVAS 898



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1056 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1115

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V+A+D G
Sbjct: 1116 SASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWI-VLKKPLDRDRYRLRVRASDKG 1174

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
               S   V+V +     N + P++ ++ Y
Sbjct: 1175 EPPSYADVDVELDVVDRNNKPPIWDKSVY 1203


>gi|47230583|emb|CAF99776.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1032

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 19/206 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           YL+ +   LD +     ++ F+++A +    + +    + V L D NDNAP    P+I  
Sbjct: 418 YLLETSALLDYE--GTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNAPIFTQPVIEL 475

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +  R +  I ATD D G NAEI Y +          F +D ++GV+ T  ++  
Sbjct: 476 EVMENNKRDRFLATISATDEDSGKNAEIVYQL----GPNASFFDLDRKTGVL-TASRVFD 530

Query: 119 GE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E   ++  TV A D G    QT   + V V   N  +P F  N +   VSE     STV
Sbjct: 531 REDQDRFLFTVTARDNGTPPLQTQATIIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTV 590

Query: 175 ATITVSRLASG------CAIMNKEEN 194
             ITV+   +G       +I+N  EN
Sbjct: 591 GVITVTDSDAGENAAVSLSILNDNEN 616



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      S    +T+N+ D+NDN P +   P      
Sbjct: 625 VIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFK 684

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I    K
Sbjct: 685 LVPLSSIPGSV---VAEVFAVDGDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITLEEK 739

Query: 116 LIAGE--QYSITVQATDTGG-KSSQTIVEV 142
            I  +   + + V  +D G  KS  T+V V
Sbjct: 740 PIVTDIGLHRLVVNISDLGYPKSLHTLVLV 769



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 18/191 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ ++NLDR+  +    + +V   E  G+   S    L V + D+NDN P       I++
Sbjct: 203 LIVQQNLDREQKDTYVMKIKV---EDGGSPQKSSTAILQVTVTDVNDNRPVFKE-GQIEV 258

Query: 62  QAGEAR---RQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
              E       +++++ATD D+G NAEI Y     VS +    F ++  SG+I     L 
Sbjct: 259 HIPENSAIGTSVMQLQATDADIGANAEIHYVFGTQVSPSTKRLFALNSTSGLITVQRPLD 318

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + ++V A+D     ++  V ++V       P  + R  +   N   V +SE   
Sbjct: 319 REETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLRYIISPING-TVFLSEKDP 377

Query: 170 INSTVATITVS 180
           IN+ +A ITVS
Sbjct: 378 INTKIALITVS 388


>gi|229442269|gb|AAI72777.1| FAT tumor suppressor 2 precursor [synthetic construct]
          Length = 866

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 20/143 (13%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           + + S++ LDR+  +  K+  +V A + +  A+   V++ + + D+NDN+P+   +    
Sbjct: 735 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 785

Query: 61  IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           +  G+          I+K+ ATD D   NA+ITYS++     G H+F++DP +G + T  
Sbjct: 786 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 842

Query: 115 KLIAGEQ--YSITVQATDTGGKS 135
            L    +  +++  +ATD GG+S
Sbjct: 843 ALDRERKDVFNLVAKATDGGGRS 865



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
           ++  V+A   Q T     VS+ + + D+NDN P     P   +  +       ++++ A 
Sbjct: 534 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 593

Query: 77  DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
           D D G + +++Y +     + +H+ F ID  SG I T  +L     + Y   V A D G 
Sbjct: 594 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 653

Query: 134 K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               SSQ +V+VS+    N  +P F    Y  +V E +     VAT+
Sbjct: 654 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 699



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ V + D+NDN P    ++    I  G  A+  ++++ A+D D G N +++Y I    +
Sbjct: 28  TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 87

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
                F+I+  +G + T  +L   A + + + V+A D G    + +T+V V+ V   N  
Sbjct: 88  DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 146

Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
            P F+Q  Y+ NVSE A+    V  +
Sbjct: 147 PPEFRQPQYEANVSELATCGHLVLKV 172



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           + + + LDR+         +V+AR+  G  A   V +   L D NDN P+       + I
Sbjct: 308 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 365

Query: 62  QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
           Q+  ++   ++++ A D D G NA++TYS   V+   L K    I+P +GV++    L+ 
Sbjct: 366 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 422

Query: 119 GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
            E  ++   ++A D G     ++V V +   P   S P F +  Y  +  E
Sbjct: 423 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 473



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 8/171 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEAT 76
           F  +V A +K     +    + VN++DINDN P  R P       +       ++K++A 
Sbjct: 116 FHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQAI 175

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGK 134
           D D    + + Y I  +S      F I+  SG+I      K      Y++ V A+D  G 
Sbjct: 176 DPDSRDTSRLEYLI--LSGNQDRHFFINSSSGIISMFNLCKKHLDSSYNLRVGASD--GV 231

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              T+         N  SP FQQ+ Y+  ++E A + + V  +      SG
Sbjct: 232 FRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKVIDLLAIDKDSG 282


>gi|195325654|gb|ACF95735.1| protocadherin-11 [Mustela putorius furo]
          Length = 686

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 39  LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
           L V + D NDNAP    P I     +      ++ KI ATD D G NAEI Y +      
Sbjct: 182 LLVKVKDENDNAPVFTQPFISLSLPENNSPGTKLTKISATDGDSGYNAEINYLL---GVD 238

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
              +F +D  +G++    KL     E+YS TV A D G     T   VSV +   N  SP
Sbjct: 239 APSEFSLDHHTGILTAVRKLDREKQEKYSFTVLAKDNGMPPLITNATVSVTILDQNDNSP 298

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
           +F  N Y+  V E    + TV  ITV+
Sbjct: 299 IFTHNEYNFYVPENLPRHGTVGLITVT 325



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D     ++ F V A +      S    +T+N+ D+NDN P   ++P      
Sbjct: 354 VIQPNISFDREKQERYTFYVKAEDGGKIPHSSTSKVTINVVDVNDNKPVF-IVPSSNNSY 412

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      +  + A DND G+NA++ YSI   +  GL  F ID  +G I    K +
Sbjct: 413 ELVLPSANPGTVVFTVLAVDNDTGMNAKLRYSIVGGNTKGL--FIIDQTTGNITLKEKCV 470

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   Y + ++A D G   S
Sbjct: 471 VTDLGLYRLIIKAKDLGQPES 491



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 27/169 (15%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQIQ 62
           LDR+     K+ F V+A++          +++V + D NDN+P          +P    +
Sbjct: 258 LDREKQE--KYSFTVLAKDNGMPPLITNATVSVTILDQNDNSPIFTHNEYNFYVPENLPR 315

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGE 120
            G     +  I  TD D G N+ +T SI  +++     F IDP++GVI+          E
Sbjct: 316 HG----TVGLITVTDPDYGENSVVTLSILDMND----HFTIDPQTGVIQPNISFDREKQE 367

Query: 121 QYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVF----QQNTYDV 162
           +Y+  V+A D GGK   SS + V ++VV   N   PVF      N+Y++
Sbjct: 368 RYTFYVKAED-GGKIPHSSTSKVTINVV-DVNDNKPVFIVPSSNNSYEL 414



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 12/118 (10%)

Query: 73  IEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQA 128
           + ATD D+G NA+I +   + VSN     F ++  +G+I T  + + GE+   + + V A
Sbjct: 1   LHATDADIGGNAKIYFYFSNLVSNIAKRLFHLNTTTGLI-TIKQQLDGEESPNHKLLVLA 59

Query: 129 TDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +D G   ++ +V V+V       P  + R  +   N   V +SE A +N+ +A ITV+
Sbjct: 60  SDGGSMPARAMVLVNVTDINDNAPSIDIRYIINPING-TVFLSENAPVNTKIALITVT 116


>gi|195483811|ref|XP_002090443.1| GE13118 [Drosophila yakuba]
 gi|194176544|gb|EDW90155.1| GE13118 [Drosophila yakuba]
          Length = 3281

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1692 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1751

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1752 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1811

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1812 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1870

Query: 174  VATITV 179
            + T+TV
Sbjct: 1871 ILTVTV 1876



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V A+D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRDRYRLRVSASDKG 1159

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
              +S   V+V +     N + P++ ++ Y
Sbjct: 1160 TPASAADVDVELDVVDRNNKPPIWDKSIY 1188


>gi|195344744|ref|XP_002038939.1| GM17111 [Drosophila sechellia]
 gi|194134069|gb|EDW55585.1| GM17111 [Drosophila sechellia]
          Length = 3151

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1639 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1698

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1699 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1758

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1759 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1817

Query: 174  VATITV 179
            + T+TV
Sbjct: 1818 ILTVTV 1823



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|405951684|gb|EKC19577.1| Protocadherin-1 [Crassostrea gigas]
          Length = 1027

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 13/172 (7%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y++VS+  LDR+  +  K+ F V   +      S  VS+TV + D+NDNAP         
Sbjct: 410 YIIVSRLPLDRETTD--KYDFTVTCIDAGAPPLSSTVSITVLVQDVNDNAPVFSKKSYFA 467

Query: 61  --IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
             ++  E  +QIV + A+D DL  N+ I    Y++    L  F ID RSG ++       
Sbjct: 468 SIVENNEPGKQIVSLLASDKDLDNNSRIR---YYIQGKNL-DFAIDSRSGALKAKRSFDR 523

Query: 118 -AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
               +Y +T+ ATD+G    ++ T V VSV+   N  +P F+ + +   V E
Sbjct: 524 EHASEYEVTIVATDSGFPPLTATTTVFVSVI-DVNDNAPSFKVSHFQFFVLE 574



 Score = 39.7 bits (91), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)

Query: 43  LNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDND-LGVNAEITYSIYHVSNTGL 98
           ++DIND+AP   +   I +   E+      I  + A D D    +  +TY   +    GL
Sbjct: 118 IDDINDHAPSFAL-DSINVNVPESTPVGTIITSVTAIDRDSTQKHRNVTYDAQNTEMFGL 176

Query: 99  H----KFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                K  +   S ++       + E YS+ V A D G KS  + + + + V   N   P
Sbjct: 177 QVTQTKDNVPVASLILLQPLDRESREAYSVLVSAADGGQKSESSDINIDITVTDVNDNYP 236

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F Q +Y+++V E A+I + V T+T S
Sbjct: 237 QFGQPSYNISVQENATIGTIVLTVTAS 263



 Score = 37.0 bits (84), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITY 88
           + S  +++ + + D+NDN P+    P   I   E       ++ + A+D D+  N  +TY
Sbjct: 217 SESSDINIDITVTDVNDNYPQFGQ-PSYNISVQENATIGTIVLTVTASDEDVRDNGRVTY 275

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGK--SSQTIVEVSV 144
            I   +      F ID  +G I   G L  I+GE + + +   D G +  SS+  + +SV
Sbjct: 276 GISGETTFFSLFFMIDKYTGDILVKGDLTRISGEHFELEIVCEDHGEQPLSSKVNLTLSV 335

Query: 145 V 145
           +
Sbjct: 336 L 336



 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 14/182 (7%)

Query: 5   SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQ 62
           +K + DR+  +  ++   ++A +      +   ++ V++ D+NDNAP  ++       ++
Sbjct: 517 AKRSFDRE--HASEYEVTIVATDSGFPPLTATTTVFVSVIDVNDNAPSFKVSHFQFFVLE 574

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
              A  ++ ++ ATD D+GVN  + +S+       +    I  + G I+T+  L   E+ 
Sbjct: 575 NMPAGMKVGQLSATDKDVGVNGNLLFSVTEGYKNTIP--FIVFQDGSIKTSETLDREEKD 632

Query: 122 -YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF----QQNTYDVNVSEGASINSTVA 175
            Y   V+A D G  +  +  +V+V +   N  +PV     ++N   V  SE  ++ STVA
Sbjct: 633 RYVFQVKAYDLGSPTIVSTADVTVRLVDDNDNAPVINYPNKENETIVVFSE-KTVGSTVA 691

Query: 176 TI 177
            I
Sbjct: 692 VI 693


>gi|351708750|gb|EHB11669.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Heterocephalus glaber]
          Length = 2976

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
            +   + AR+      S    L + +ND+NDNAP+             +PP          
Sbjct: 842  YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 893

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
             +++I ATD D G+N  + Y+ +   + G   F ++  SG++ T  +L    +A  QY +
Sbjct: 894  SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYIL 950

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               A D G   ++T +EV+V V   N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 951  RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 1007



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 20/191 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V + E LDR+  +   FR  V A++      S   +LT+ + D ND+ P        Q +
Sbjct: 302 VTTAEELDRETKSTHVFR--VTAQDHGVPRRSALATLTILVTDTNDHDPVFE-----QQE 354

Query: 63  AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
             E+ R+       ++ + ATD D   NA I Y +   S     + F IDPRSGVI T G
Sbjct: 355 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 414

Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            +     E Y + V+A+D G   G  S T      V   N  +P F +  Y V V E  +
Sbjct: 415 PVDREEVESYKLIVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVA 474

Query: 170 INSTVATITVS 180
             + V  IT S
Sbjct: 475 PGAPVLRITAS 485



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           ++ V+ E LDR+  +   + F V AR+    A +   S++V + D+NDN P     P   
Sbjct: 622 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTIVDVNDNNPTFTQ-PEYT 677

Query: 61  IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           ++  E       +V + A D D   ++ ITY I   S    ++F I  +SG     G L+
Sbjct: 678 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 728

Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +           QY + V A+D T   ++Q +V V+     NT  PVFQ + Y VNV+E 
Sbjct: 729 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 785

Query: 168 ASINSTVATITVS 180
               +TV  I+ +
Sbjct: 786 RPAGTTVVLISAT 798



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA ITY +       + +FRID  +G + T  +L   +Q  Y++ + 
Sbjct: 792 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 847

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ +V   N  +P F +++Y  +V E     ++V  I+ +   SG
Sbjct: 848 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 906



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEA-RRQIVKIEATDNDLGVNAEITYSIY 91
           S   ++ +++ D NDNAP+      + Q++   A    +++I A+D D G NA + YSI 
Sbjct: 441 SATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVAPGAPVLRITASDRDKGSNALVHYSI- 499

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSVV 145
            +S     +F +D ++G ++    L     ++Y++ V+A D GG+   +    +V V V+
Sbjct: 500 -MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQVL 557

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N  +P+F    +   V E   +   V  +
Sbjct: 558 -DINDNAPIFVSTPFQATVLESVPLGYLVLHV 588



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
            +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 933  IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 990

Query: 57   ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                 PI +        + ++ ATD D G NA+I Y I  V       F++D  SG +  
Sbjct: 991  VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 1041

Query: 113  TGKLIAGE--QYSITVQAT 129
               L   +  +Y + +QAT
Sbjct: 1042 LVDLDYEDRPEYILVIQAT 1060


>gi|344265050|ref|XP_003404600.1| PREDICTED: protocadherin beta-2-like [Loxodonta africana]
          Length = 797

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 41  VNLNDINDNAPRLP-MIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDNAP    ++  +QI +      Q+  + A D D+G N EI+Y+ +  S    
Sbjct: 231 VEVVDINDNAPEFAKLLYEVQIPENSPIGSQVATVSARDLDIGTNGEISYTFFQASEDIR 290

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV 145
           + FRI+  SG +  T KL   + + Y++ +QATD GG S   +V V V+
Sbjct: 291 NTFRINTESGELLLTQKLDFESVQTYTLNIQATDGGGLSGSCVVFVQVM 339


>gi|260795106|ref|XP_002592547.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
 gi|229277768|gb|EEN48558.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
          Length = 1894

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 7/145 (4%)

Query: 41   VNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN P L        +  G  A   +V++ A+D+D   NAEITYSI   S  G 
Sbjct: 1563 VTILDVNDNTPVLTQASYTASVSEGVTAGTSVVQVVASDDDADENAEITYSITSASQPG- 1621

Query: 99   HKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
              F ID  SGV+ T   L     + Y++TVQATD G  S      V++ +   N  +P F
Sbjct: 1622 -HFEIDGASGVVRTAQALDRENIDSYTLTVQATDNGVPSFNNDTTVTITIDDENDNTPAF 1680

Query: 156  QQNTYDVNVSEGASINSTVATITVS 180
              N Y   + E  +  ++V  ++ S
Sbjct: 1681 DSNLYSFTLEENVAGGTSVGDVSAS 1705



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 23   VIAREKQGT-AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDND 79
            V+     GT A S    + V LND+NDN P   P+   + +    A   +V  ++A D D
Sbjct: 1438 VVQATDSGTPAKSSLCRVKVYLNDLNDNTPSFVPLEYVVSVLENAAVGTLVTPVQALDPD 1497

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
               NA +T++I    +   ++F ID  +G I T   L   + E Y++T+ ATD G  ++ 
Sbjct: 1498 ESTNALLTFAILEGDDN--NEFAIDSSTGTIRTASTLDRESIESYTLTITATDGGTPTNL 1555

Query: 138  T---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            T    V V+++   N  +PV  Q +Y  +VSEG +  ++V  +  S
Sbjct: 1556 TGSGTVLVTILD-VNDNTPVLTQASYTASVSEGVTAGTSVVQVVAS 1600



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 5/140 (3%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ + L D+NDN P   P +    +  G A   Q++++ ATD DLG N+ + Y+I     
Sbjct: 1136 TVNITLEDVNDNHPIFTPSVYTTSVLEGAAVGSQLLQLTATDADLGNNSVLDYTITAGDT 1195

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
             G   F +     V+ +         +S+TV ATD G  S  +   V V V   N  SPV
Sbjct: 1196 NG--TFNLSGDILVLASGLDHSVRSYFSLTVTATDRGVPSLSSTANVVVNVLAENNYSPV 1253

Query: 155  FQQNTYDVNVSEGASINSTV 174
            F   T  V VSE A++ +TV
Sbjct: 1254 FDNGTNTVWVSEDAAVGTTV 1273



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 11/135 (8%)

Query: 47   NDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI 103
            NDN P     P   +   E       I  +EATD DL  N E+TYSI  VS  G+  F I
Sbjct: 1358 NDNKPAFSQ-PVYTVYVDENIPVGSNITTVEATDPDLNGNGEVTYSI--VSGDGMAYFDI 1414

Query: 104  DPRSGVIETTGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
            +  +G+I T+   +  E  +   + VQATD+G  +  ++  V V +   N  +P F    
Sbjct: 1415 NSTTGLISTSAD-VDRETLALNNLVVQATDSGTPAKSSLCRVKVYLNDLNDNTPSFVPLE 1473

Query: 160  YDVNVSEGASINSTV 174
            Y V+V E A++ + V
Sbjct: 1474 YVVSVLENAAVGTLV 1488



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 14/190 (7%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQ---GTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI 61
            +EN+DR+  +       V+A + +   G   +V   + + + D+NDN P   P +  + +
Sbjct: 888  QENIDRESTD--SLSLVVMATDSEDSSGAQHNVTTLVNITVLDVNDNPPVFDPHVYYVSL 945

Query: 62   -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIA 118
             ++      + +++ TDND G NA++TYSI    N  L KF +   +G  +++ +     
Sbjct: 946  LESTSIGAAVTQLKCTDNDEGTNADMTYSI-STGNDAL-KFNVTSDNGEIILQDSLDYET 1003

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP--VFQQNTYDVNVSEGASINSTVA 175
              +Y +T  A+D G  S      V V V   N  +P  +     YDV +SE   I ++V 
Sbjct: 1004 STEYVLTATASDGGTPSLTGTATVYVQVVAENEHTPEIIVPSGGYDVVISEDLPIGTSVI 1063

Query: 176  TITVSRLASG 185
            ++T     SG
Sbjct: 1064 SVTAVDSDSG 1073



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 34  SVPVSLTVNLNDINDNAPRL-PMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIY 91
           S   ++ V ++D+ND  P   P    + I  G +    +  +  +D+D+G N+E+ +SI 
Sbjct: 385 SATTTVFVTVSDVNDVTPVCSPSFYAVTISEGADVTSPVTMVTCSDDDVGENSELNFSI- 443

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPG 147
             +      F I+  SG I T  K +  E    YS+ VQ +D+G  S      V V V  
Sbjct: 444 -TAGNSNDTFAINDTSGEI-TIAKDLDLEVTSFYSLGVQVSDSGALSLTGTATVYVTVTN 501

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P F +++Y  NVSE  S+ + V  +  S
Sbjct: 502 VNDFVPAFSESSYSFNVSESESVGTEVGQVVAS 534



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 13/148 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           V +  +N++ P      P      E       +  + ATD D+G +  +TY+I       
Sbjct: 287 VQVTSVNEHDPVFDATSPANASVDEGSPVGTTVAIVSATDADVGADGVLTYTIIG----K 342

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRS 152
             KF +D  +G ++T   L       Y++T+ A D G    +S+ T V V+V    N  +
Sbjct: 343 YDKFALDASTGALQTVAPLDRETTSSYTLTLVAQDGGVSLTRSATTTVFVTV-SDVNDVT 401

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           PV   + Y V +SEGA + S V  +T S
Sbjct: 402 PVCSPSFYAVTISEGADVTSPVTMVTCS 429



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 31/196 (15%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLT---VNLNDINDNAPRLPMIPP--IQIQA 63
           LDR+  N   +  +V AR+   +  +   S T   + + D+NDN P   M  P  I    
Sbjct: 149 LDREIAN--SYALEVQARDGGDSLRTYQTSTTTVDITVEDVNDNNP---MFDPSVIYTTV 203

Query: 64  GEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            E+      I ++  TD+D GVN E+TY I   ++ GL     D   G++     L  G 
Sbjct: 204 SESTGIGASIAQLNCTDSDDGVNQELTYVISAGNDVGLFSVSSD---GLV----SLAYGL 256

Query: 121 QY------SITVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNT-YDVNVSEGASI 170
            Y      ++TV ATD GG S Q     +V   V   N   PVF   +  + +V EG+ +
Sbjct: 257 DYETSTAHALTVVATD-GGTSPQLSGTATVYVQVTSVNEHDPVFDATSPANASVDEGSPV 315

Query: 171 NSTVATITVSRLASGC 186
            +TVA ++ +    G 
Sbjct: 316 GTTVAIVSATDADVGA 331



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)

Query: 5    SKENLDRDPPNPGKFRFQVIAREKQGTAASV--PVSLTVNLNDINDNAPRL---PMIPPI 59
            S  N+DR+        + +I R +     S+   V++ + ++D+NDNAP       +   
Sbjct: 1740 STANIDRET----IAEYSIICRVQDSGTPSLFSDVTVQITVSDVNDNAPIFNNNDTLTAT 1795

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHK---FRIDPRSGVI 110
              +  E    ++K+ ATD D G NA++ Y+I   +++ G+     FRI   +GV+
Sbjct: 1796 LAENAEPGNTVIKVTATDLDKGANADVIYTISSDLADNGVKATRYFRISETTGVV 1850



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 17/195 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            +V + + LDR+  N   +   V A +    + +   ++T+ ++D NDN P     +    
Sbjct: 1631 VVRTAQALDRE--NIDSYTLTVQATDNGVPSFNNDTTVTITIDDENDNTPAFDSNLYSFT 1688

Query: 61   IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG----- 114
            ++   A    V  + A+D+D+  NA++++SI  VS+   H F ++  +G I T+      
Sbjct: 1689 LEENVAGGTSVGDVSASDDDINSNADLSFSI--VSDDSQH-FVVNSNTGRISTSSTANID 1745

Query: 115  -KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN-TYDVNVSEGASIN 171
             + IA  +YSI  +  D+G  S  + V V + V   N  +P+F  N T    ++E A   
Sbjct: 1746 RETIA--EYSIICRVQDSGTPSLFSDVTVQITVSDVNDNAPIFNNNDTLTATLAENAEPG 1803

Query: 172  STVATITVSRLASGC 186
            +TV  +T + L  G 
Sbjct: 1804 NTVIKVTATDLDKGA 1818



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 41  VNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           + + D+NDNAP   P +  + + +       +V +  TD D G+NA ++++I  V+    
Sbjct: 712 ITVTDVNDNAPVCSPALLAVSVAEGAAVGSSVVSVSCTDQDEGINAALSHTI--VAGNTN 769

Query: 99  HKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             F ++  +G I   ++  L     + + +  TD GG      V V V +   N  +P F
Sbjct: 770 DSFAVNSSTGSIRLASSLDLEVTPTFVLELIVTDGGGPMLTGSVTVHVKLTDDNEFAPAF 829

Query: 156 QQNTYDVNVSEGASINSTVATITVS 180
               +  NVSE A+I +T+  ++ +
Sbjct: 830 TDAFFAFNVSEDATIGTTIGQVSAT 854



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 14/145 (9%)

Query: 41  VNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           V L ++N+ AP    +    +  +       + ++ ATD D+    ++T+SI  VS    
Sbjct: 74  VTLTNVNEFAPNFTEVSYSFLVSENTTVGTSVGQVSATDGDVNEVGDVTFSI--VSGNDG 131

Query: 99  HKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-----KSSQTIVEVSVVPGPNT 150
             F ID  +GVI T   L   IA   Y++ VQA D G      ++S T V+++ V   N 
Sbjct: 132 DVFGIDFLTGVISTATVLDREIA-NSYALEVQARDGGDSLRTYQTSTTTVDIT-VEDVND 189

Query: 151 RSPVFQQNTYDVNVSEGASINSTVA 175
            +P+F  +     VSE   I +++A
Sbjct: 190 NNPMFDPSVIYTTVSESTGIGASIA 214



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
             ++ + A D+D G +  + YSI   ++    KF I+  +G +     L     + Y++TV
Sbjct: 1061 SVISVTAVDSDSGPDGTVVYSIEEGNSE--QKFVIEENTGELSVALPLDREYTDSYTLTV 1118

Query: 127  QATDTGGKSSQTIVEVSVV----PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +A D+   SSQ +   + V       N   P+F  + Y  +V EGA++ S +  +T +
Sbjct: 1119 KAMDSPSNSSQALSNFTTVNITLEDVNDNHPIFTPSVYTTSVLEGAAVGSQLLQLTAT 1176


>gi|78706946|ref|NP_001027278.1| Cadherin-N, isoform K [Drosophila melanogaster]
 gi|72151393|gb|AAZ66475.1| Cadherin-N, isoform K [Drosophila melanogaster]
          Length = 3100

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1589 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1648

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1649 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1708

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1709 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1757



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG----EQYSITVQA 128
             A+D D   N  I YS+    N   L  F I   SG I    K + G    ++Y + V A
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDGCYPRDRYRLRVSA 1159

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
            +D G  +S   V+V +     N + P++ ++ Y
Sbjct: 1160 SDKGTPASAADVDVELDVVDRNNKPPIWDKSIY 1192


>gi|24584879|ref|NP_724074.1| Cadherin-N, isoform G [Drosophila melanogaster]
 gi|22946728|gb|AAN10997.1| Cadherin-N, isoform G [Drosophila melanogaster]
          Length = 3096

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1753



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V A+D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRDRYRLRVSASDKG 1159

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
              +S   V+V +     N + P++ ++ Y
Sbjct: 1160 TPASAADVDVELDVVDRNNKPPIWDKSIY 1188


>gi|47216565|emb|CAG04743.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1526

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 19/174 (10%)

Query: 17  GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIE 74
           G +  ++IA +      +   +LTV + D+ND  P   P +  + ++    R  +V ++ 
Sbjct: 802 GLYYLRIIAYDAGNFPRTSTSTLTVKVLDVNDETPTFDPRVYNVSLKESIPRDHVVARLA 861

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            +DND G+NAE++Y I   +  G  KF +  R G++ T   L    Q  Y++ V+A D G
Sbjct: 862 CSDNDAGLNAELSYFITGGNQDG--KFSVGFRDGIVRTVVGLDRETQAAYTLIVEAIDNG 919

Query: 133 GKSSQ------TIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
              S+        VEV  V   N   P+F QN+Y+ +V E    G SI    AT
Sbjct: 920 PAGSRRTGTATVFVEVQDV---NDNRPIFLQNSYETSVLESVPQGTSILQVQAT 970



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 22/192 (11%)

Query: 1   YLVVS-KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----- 54
           Y V+S    LD +    G    +V+ ++    A +  V +TV + D NDN P        
Sbjct: 492 YAVISVTRPLDYEQVPSGMIHLEVMVKDGGSPALNSTVPVTVEVIDENDNPPEFSKSSYI 551

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGV---NAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
           +  P  I AGE    ++ + ATD D       A + YS+      G  +FR++ RSG I 
Sbjct: 552 VKIPENINAGEWA-TVLLVNATDLDASREFGQASLIYSL-----EGSSQFRLNSRSGEIT 605

Query: 112 TTGKLI--AGEQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
           TT  L      +Y + V+A D G     K+    V ++++   N  +PV++   Y  NV 
Sbjct: 606 TTALLDRELKSEYILIVRAVDGGVGPQQKTGIATVNITIL-DINDNAPVWRDEPYHANVV 664

Query: 166 EGASINSTVATI 177
           E + IN+ V ++
Sbjct: 665 EMSPINTDVISV 676



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            SLT+N+ D+NDNAP +       +   E       ++++ ATD D+G NA + Y I    
Sbjct: 1343 SLTINILDVNDNAPVIESQKGYNVSISENVGGGTSVLRVMATDRDIGPNAMLFYYI-TAG 1401

Query: 95   NTGLHKFRIDPRSGVIET 112
            N  L  FR+D  +G + T
Sbjct: 1402 NQDL-TFRMDRMTGEMVT 1418



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
            LDR+         + I     G+  +   ++ V + D+NDN P + +    +    E+  
Sbjct: 901  LDRETQAAYTLIVEAIDNGPAGSRRTGTATVFVEVQDVNDNRP-IFLQNSYETSVLESVP 959

Query: 69   Q---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QY 122
            Q   I++++ATD D G N  + Y I   ++  L  F ID ++G++    + +  E    +
Sbjct: 960  QGTSILQVQATDADQGENGSVLYRILTGNSNNL--FSIDRQTGLVTRGLRALDRETSSSH 1017

Query: 123  SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATI 177
             + V+A ++   S ++ V V + V   N   PVF Q  Y+ + + E A + ++V  +
Sbjct: 1018 MLEVEAYNSDEGSMRSSVRVIIYVNDANDEVPVFTQQQYNRLGLRETAGVGTSVIVV 1074


>gi|340379309|ref|XP_003388169.1| PREDICTED: protocadherin Fat 4-like [Amphimedon queenslandica]
          Length = 2416

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 12/169 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            + F + A    G   S  VS  V + D+NDNAP+ P I PI+    E       +V++ A
Sbjct: 854  YNFTIFASNFDGLGTSFNVS--VEITDVNDNAPQFP-ISPIRANVTEHVDVGTSVVQVVA 910

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG 133
            TD D G NAEI+YSI   +  G   F I+ ++G+I     +      ++++TVQA D G 
Sbjct: 911  TDIDSGSNAEISYSIILGNLNG--AFAINNKTGLITVNADIDRELVNEFTLTVQAEDLGE 968

Query: 134  KS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             S    T   +  V   N   PVF  +T ++   E  ++ S   TI+ +
Sbjct: 969  PSRLRNTTAVIITVNDINDNPPVFMPSTINLTFPENQALGSLNITISAT 1017



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 21/187 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQA 63
           LDR+  +   ++F VI  +    + S+  + TV + D+NDNAP     R  +  P     
Sbjct: 741 LDRETRD--LYQFTVIVMDNGSPSLSIRTTATVRVLDVNDNAPEFVQGRTFLSIPEDTPI 798

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
           G    Q + +   D+D+G+N+ I+Y +   S+     F I+  + ++  +G L A E   
Sbjct: 799 GRPIEQYIVV---DDDIGINSLISYRLE--SSLPSIPFSIN-NNALLTVSGPLDADEGIT 852

Query: 121 QYSITVQAT--DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y+ T+ A+  D  G S    VE++ V   N  +P F  +    NV+E   + ++V  + 
Sbjct: 853 LYNFTIFASNFDGLGTSFNVSVEITDV---NDNAPQFPISPIRANVTEHVDVGTSVVQVV 909

Query: 179 VSRLASG 185
            + + SG
Sbjct: 910 ATDIDSG 916



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 26/179 (14%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEAT 76
            R  V+  +   +  +   +LTVN+ D+N+ AP+   + P+  + GEA      + K+ AT
Sbjct: 1165 RVHVLVIKANDSIHTDNATLTVNVLDVNEFAPQF--VGPVSFEVGEANSTGDVVGKVMAT 1222

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQY--------SI 124
            D D G +  + Y +   S +GL  F +D  +G+I T   L    +  E +        S+
Sbjct: 1223 DRD-GSDT-VMYFLESNSISGL--FSLDSSTGIITTRSPLDREGLVEEGHFLPPDSSESV 1278

Query: 125  TVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            TV A D+G +      E ++   +   N  SPVF  ++Y   + E  ++N   A   VS
Sbjct: 1279 TVLAVDSGTRPGPLRTEQNITIRLLDINDNSPVFNPSSYTTTIPE--NVNEITALFNVS 1335



 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            V +    DR+  N   F F +IA ++   + S   S TV + D+NDN P+       + +
Sbjct: 1366 VFATSPFDREDVN--LFNFMIIATDQGNPSLSGSASATVRVTDVNDNPPQFSTNFDYERE 1423

Query: 63   AGEARR---QIVKIEATDNDLGVNAEITYSIY----HVSNTGLHKFRIDPRSGVIETTGK 115
              E  +    + +I   D+D G+NA +T +      + S +    FRI+  +G+++   +
Sbjct: 1424 VAEDTQVGAVLTQIIVVDDDQGLNAMVTITSREGDNNCSTSSECFFRIN-NNGIVQLVRQ 1482

Query: 116  LI--AGEQYSITVQATDTGGKS 135
            L     +Q+++T+ A D+G  S
Sbjct: 1483 LDYETQQQHNVTLIAVDSGSPS 1504



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 38   SLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQI-VKIEATDNDL--GVNAEITYSIYHV 93
            ++ + +NDINDN P  +P    +     +A   + + I ATDND     N+ ITYSI   
Sbjct: 977  AVIITVNDINDNPPVFMPSTINLTFPENQALGSLNITISATDNDEPGNPNSIITYSI--T 1034

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S    + F I+  +G++     L       YS+ V+  D G  +      V+V V   N 
Sbjct: 1035 SGNDGNSFSINSATGLLSLVSSLDFEVRNNYSLVVEGRDNGDPTMTGTALVNVAVTNVND 1094

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              PV  ++  ++ V E   INS++A    + L
Sbjct: 1095 HPPVITRDV-EITVPENTPINSSLAQFNATDL 1125



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 13/148 (8%)

Query: 39   LTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +T+ L DINDN+P          I     E    +  + ATD DLG N+ I YS+  VS+
Sbjct: 1298 ITIRLLDINDNSPVFNPSSYTTTIPENVNEIT-ALFNVSATDADLGNNSVIRYSL-SVSD 1355

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                 F IDP +G +  T      +   ++  + ATD G  S       +V V   N   
Sbjct: 1356 ----DFSIDPVTGTVFATSPFDREDVNLFNFMIIATDQGNPSLSGSASATVRVTDVNDNP 1411

Query: 153  PVFQQN-TYDVNVSEGASINSTVATITV 179
            P F  N  Y+  V+E   + + +  I V
Sbjct: 1412 PQFSTNFDYEREVAEDTQVGAVLTQIIV 1439


>gi|334350362|ref|XP_003342342.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-19-like [Monodelphis
           domestica]
          Length = 1144

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 12/193 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LVV K NLDR+      + +++ A +         V L + + D NDN P  P    +  
Sbjct: 188 LVVEK-NLDRE--TQAYYNYRITALDGGDPPRMGTVGLGIKVIDSNDNNPVFPEATYVVS 244

Query: 62  --QAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI- 117
             +       ++ + ATD D G N E+ YS Y +V+      F+IDP SG+I  +G +  
Sbjct: 245 VPENAPLNTPVIHLNATDPDEGTNGEVVYSFYGYVNEKARGLFQIDPHSGLISVSGAIDY 304

Query: 118 -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV---FQQNTYDVNVSEGASINS 172
             G  Y + VQA D G  S     +V+V V   N  +PV      N+  V VSE A    
Sbjct: 305 EQGRVYELDVQAKDLGPNSIPAHCKVTVTVLDVNDNAPVINLLSVNSELVEVSESAPPGY 364

Query: 173 TVATITVSRLASG 185
            +A + VS   SG
Sbjct: 365 VIALVRVSDRDSG 377


>gi|78706948|ref|NP_001027279.1| Cadherin-N, isoform J [Drosophila melanogaster]
 gi|72151391|gb|AAZ66473.1| Cadherin-N, isoform J [Drosophila melanogaster]
          Length = 3099

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1588 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1647

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1648 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1707

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1708 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1756



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG----EQYSITVQA 128
             A+D D   N  I YS+    N   L  F I   SG I    K + G    ++Y + V A
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDGCYPRDRYRLRVSA 1159

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
            +D G  +S   V+V +     N + P++ ++ Y
Sbjct: 1160 SDKGTPASAADVDVELDVVDRNNKPPIWDKSIY 1192


>gi|78706944|ref|NP_001027277.1| Cadherin-N, isoform L [Drosophila melanogaster]
 gi|72151394|gb|AAZ66476.1| Cadherin-N, isoform L [Drosophila melanogaster]
          Length = 3101

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1589 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1648

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1649 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1708

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1709 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1767

Query: 174  VATITV 179
            + T+TV
Sbjct: 1768 ILTVTV 1773



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 10/153 (6%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAG----EQYSITVQA 128
             A+D D   N  I YS+    N   L  F I   SG I    K + G    ++Y + V A
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDGCYPRDRYRLRVSA 1159

Query: 129  TDTGGKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
            +D G  +S   V+V +     N + P++ ++ Y
Sbjct: 1160 SDKGTPASAADVDVELDVVDRNNKPPIWDKSIY 1192


>gi|2381492|dbj|BAA22151.1| DN-cadherin [Drosophila melanogaster]
          Length = 3097

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1763

Query: 174  VATITV 179
            + T+TV
Sbjct: 1764 ILTVTV 1769



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|297281893|ref|XP_001088430.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
           partial [Macaca mulatta]
          Length = 402

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 22/155 (14%)

Query: 39  LTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           L + +ND+NDNAP+             +PP           +++I ATD D G+N  + Y
Sbjct: 8   LEILVNDVNDNAPQFLRDSYQGIVYEDVPPFT--------SVLQISATDRDSGLNGRVFY 59

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-V 145
           + +   + G   F ++  SG++ T  +L      QY +   A D G   ++T +EV+V V
Sbjct: 60  T-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTV 118

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              N   PVF+Q+ +DV V E + I   VA +T +
Sbjct: 119 LDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 153



 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 8/132 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           +V +   LDR+  N  ++  +  A +K    A  P+ +TV + D+NDN P          
Sbjct: 79  IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 136

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +       + ++ ATD D G NA+I Y I  V       F++D  SG +     L   
Sbjct: 137 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 194

Query: 120 E--QYSITVQAT 129
           +  +Y + +QAT
Sbjct: 195 DRPEYVLVIQAT 206


>gi|274323464|ref|NP_001162101.1| cadherin-9 precursor [Rattus norvegicus]
          Length = 788

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 20/188 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           + + + LDR+  +    R + I R K G          + ++DINDN P+         +
Sbjct: 109 IHAAKKLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 167

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G +  Q+   +A D + G +A++ YSI      G   F +DP SG+I+T    
Sbjct: 168 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 222

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           ++    EQY + +QA D GG+    S  T V +++    N   P F Q+TY  N  E A 
Sbjct: 223 MSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSLESAP 281

Query: 170 INSTVATI 177
           + + +  I
Sbjct: 282 LGTHLGRI 289



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 31/183 (16%)

Query: 20  RFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQIVK 72
           ++QV+  A++  G    +  + TVN  L D+N+N PR P     Q  + E+      + +
Sbjct: 230 QYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSLESAPLGTHLGR 288

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSITV 126
           I+A D D G NAE+ YSI      G   F +    D + G+I     L   ++  Y++ V
Sbjct: 289 IKANDPDTGENAELEYSI--SEGEGSDMFDVITDKDTQEGIITVKQNLDFEKKMLYTLRV 346

Query: 127 QATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A++T         G      +V++SV  V  P    PVF + +Y + V E     S + 
Sbjct: 347 DASNTHPDPRFLHLGPFKDSAMVKISVEDVDEP----PVFSKLSYLMEVDEDVKEGSIIG 402

Query: 176 TIT 178
            +T
Sbjct: 403 QVT 405


>gi|363729172|ref|XP_003640608.1| PREDICTED: protocadherin-9 [Gallus gallus]
          Length = 1121

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P      
Sbjct: 626 VIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNTSFK 685

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P+    G     + ++ A D D G+NAE+ Y+I + +N GL  FRIDP +G I    K
Sbjct: 686 LVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVNGNNKGL--FRIDPVTGNITLEEK 740

Query: 116 LIAGE--QYSITVQATDTG-GKSSQTIVEV 142
               +   + + V  +D G  KS  T+V V
Sbjct: 741 PTPNDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P       +++
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKE-SQVEV 259

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
              E       ++++ ATD D+G NAEI Y     V+      F ++  +G+I     L 
Sbjct: 260 HIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRFFALNNTTGLITVQRSLD 319

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE   
Sbjct: 320 REETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSEKDP 378

Query: 170 INSTVATITVS 180
           +N+ +A ITVS
Sbjct: 379 VNTKIALITVS 389


>gi|328702680|ref|XP_003241980.1| PREDICTED: neural-cadherin-like [Acyrthosiphon pisum]
          Length = 1040

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 664 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 721

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I+K++A D D G NAEI    YHVS+     F +D  SG++    +L A 
Sbjct: 722 VDEDIPLGTSILKVKAMDADSGENAEIE---YHVSD---DHFAVDA-SGIVNNNKQLDAD 774

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   + A D G  S      + +     N   P F Q  Y  NV E A  N+ V 
Sbjct: 775 NNNAYYEFVLTAKDKGEPSKTGTATIRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 834

Query: 176 TITVS 180
           T+  S
Sbjct: 835 TVVAS 839



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            + V + D+NDN P          +  E       ++K+ ATD D GVN ++ YSI    N
Sbjct: 910  VVVFITDVNDNKPVFRECAKYNPKVEEGAPNGSPVLKVHATDEDKGVNGQVKYSIVQQPN 969

Query: 96   TGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
                KF +D  +G + +T K+       G+  S+T++ATD G  S + +   +V +   N
Sbjct: 970  QKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTIKATDQGDPSLEGVCSFTVEITDVN 1028

Query: 150  TRSPVFQQ 157
               P+F +
Sbjct: 1029 DNPPLFDR 1036


>gi|195388064|ref|XP_002052710.1| GJ20220 [Drosophila virilis]
 gi|194149167|gb|EDW64865.1| GJ20220 [Drosophila virilis]
          Length = 3328

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1723 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1782

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1783 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1842

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1843 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1901

Query: 174  VATITV 179
            + T+TV
Sbjct: 1902 ILTVTV 1907



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++  A      ++K+ ATD D GVN ++ YSI    
Sbjct: 986  VVVFITDVNDNKPVFKDCGTYYPKVEEGAPNGS-PVIKVVATDEDKGVNGQVKYSIVQQP 1044

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1045 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1103

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1104 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1135



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 740 LAKELDFEDLRQPHVYTLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 797

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 798 VDEDIPLGTSILRVKAMDADSGANAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 850

Query: 120 EQ---YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y   V A D G   KS    V V      N   P F Q  Y  NV E A  N+ V
Sbjct: 851 NNNAYYEFIVTAKDKGEPAKSGTATVRV-YTKNKNDEEPKFSQQVYTPNVDENAGPNTLV 909

Query: 175 ATITVS 180
            T+  S
Sbjct: 910 TTVVAS 915



 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1073 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1132

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V+A+D G
Sbjct: 1133 SASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWI-VLKKPLDRDRYRLRVRASDRG 1191

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
               S   V+V +     N + P++ ++ Y
Sbjct: 1192 DPPSYADVDVELDVVDRNNKPPIWDKSIY 1220


>gi|24584867|ref|NP_724068.1| Cadherin-N, isoform H [Drosophila melanogaster]
 gi|22946723|gb|AAN10992.1| Cadherin-N, isoform H [Drosophila melanogaster]
          Length = 3095

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1584 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1643

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1644 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1703

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1704 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1762

Query: 174  VATITV 179
            + T+TV
Sbjct: 1763 ILTVTV 1768



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|405971221|gb|EKC36071.1| Protocadherin-11 X-linked [Crassostrea gigas]
          Length = 1074

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVS 94
           + +TV +NDINDNAP  P     I I  G         + ATD D+G N  IT+  Y ++
Sbjct: 111 IDVTVYINDINDNAPTFPQTSISIDISEGSFINSTFPLLGATDIDMGANNSITH--YKIT 168

Query: 95  -NTGLHKFRIDPR-SGVIETTGKLIAG------EQYSITVQATDTGG--KSSQTIVEVSV 144
            ++G+    I P+  G  +   +LI        ++Y++ V A D G   KS   +V +SV
Sbjct: 169 PDSGIFALDIIPKLDGTSDLNLRLIRALDRELMDKYTVYVSALDGGNPPKSGTLMVNISV 228

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               N ++P+F Q  Y+V + E  ++NS V  +T +   +G
Sbjct: 229 T-DINDKAPIFTQQIYNVTIKEDLAMNSLVVQVTANDGDTG 268



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 9/128 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVK 72
           ++ F V AR+      S    + + L DINDN+P       +          E    +  
Sbjct: 632 EYNFTVTARDNGVPPKSSSAMVVIKLTDINDNSPDFIFPNSVNYSVNLSFMAEVDSVVAT 691

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD 130
           + A D D GVNAEI + I   ++  L  F+ID  SG I    K+   E   Y + + ATD
Sbjct: 692 VIAVDPDKGVNAEIRFHIIEGNSENL--FKIDTYSGEIFLARKIHLYEIKIYDLLLTATD 749

Query: 131 TGGKSSQT 138
            G    +T
Sbjct: 750 QGKTQEKT 757



 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 13/187 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
           LDR+  +  K+   V A +      S  + + +++ DIND AP     I  + I+   A 
Sbjct: 196 LDRELMD--KYTVYVSALDGGNPPKSGTLMVNISVTDINDKAPIFTQQIYNVTIKEDLAM 253

Query: 68  RQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK-LIAGEQYSIT 125
              +V++ A D D G NAE++Y    +    +  F ++  SG I   G    +   Y I 
Sbjct: 254 NSLVVQVTANDGDTGRNAEVSYKFATIQTDNIDIFNMNSASGEITLVGSPEYSSTPYRII 313

Query: 126 VQATDTGG---KSSQTIVEVSVVP----GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           V+A D G    KSSQ  V V++       P+    V  +  Y + ++E A+I   VA + 
Sbjct: 314 VEAIDNGEPIRKSSQAQVIVNINDTNNNAPDISINVLSEFDYAI-ITENANIGDIVAHVE 372

Query: 179 VSRLASG 185
           V    +G
Sbjct: 373 VDDADNG 379



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 38  SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQI-VKIEATDNDLGVNAEITYSIYHVSN 95
           S  V + D NDN P     I P +I   E    + VK+ ATDND+G NA++    Y+++ 
Sbjct: 441 SFRVQILDQNDNIPLFVNKIYPCEIYENEPNVTVLVKVSATDNDVGPNAKVR---YYINP 497

Query: 96  TGLHKFRI-DPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVP--GPNT 150
            G   F+I +P  G+I T       +   Y+ TV A D G   + T     +V     N 
Sbjct: 498 GGQADFQILNPVDGIITTRHTFDREKISHYNFTVIAVDGGNPVALTATATILVTVLDRND 557

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATI 177
            +P F  + ++  + E  +  +T+  +
Sbjct: 558 VTPYFDSDVFEFIIPEEVANLTTIGFV 584



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNTRSPV 154
           F ID RSG++    K+   +      I  Q     GKS   ++ + V   +   N  +P 
Sbjct: 67  FEIDLRSGILSGKTKIDREVLCPHLRICKQDLRVAGKSGNFLLTIDVTVYINDINDNAPT 126

Query: 155 FQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           F Q +  +++SEG+ INST   +  + +  G 
Sbjct: 127 FPQTSISIDISEGSFINSTFPLLGATDIDMGA 158



 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATD 130
           ++A D D G N  +T+ +    + G   F + P +G I++  +L     E+Y+ TV A D
Sbjct: 584 VKAKDEDYGANGNVTF-VMDSDSFGKMPFLLKP-NGEIKSIRRLDREQIEEYNFTVTARD 641

Query: 131 TG--GKSSQTIVEVSVVPGPNTRSPVF---QQNTYDVNVSEGASINSTVATI 177
            G   KSS  +V + +    N  SP F       Y VN+S  A ++S VAT+
Sbjct: 642 NGVPPKSSSAMVVIKLT-DINDNSPDFIFPNSVNYSVNLSFMAEVDSVVATV 692


>gi|162424746|gb|ABX90059.1| hedgling [Amphimedon queenslandica]
          Length = 2416

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 12/169 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            + F + A    G   S  VS  V + D+NDNAP+ P I PI+    E       +V++ A
Sbjct: 854  YNFTIFASNFDGLGTSFNVS--VEITDVNDNAPQFP-ISPIRANVTEHVDVGTSVVQVVA 910

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG 133
            TD D G NAEI+YSI   +  G   F I+ ++G+I     +      ++++TVQA D G 
Sbjct: 911  TDIDSGSNAEISYSIILGNLNG--AFAINNKTGLITVNADIDRELVNEFTLTVQAEDLGE 968

Query: 134  KS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             S    T   +  V   N   PVF  +T ++   E  ++ S   TI+ +
Sbjct: 969  PSRLRNTTAVIITVNDINDNPPVFMPSTINLTFPENQALGSLNITISAT 1017



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 21/187 (11%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMIPPIQIQA 63
           LDR+  +   ++F VI  +    + S+  + TV + D+NDNAP     R  +  P     
Sbjct: 741 LDRETRD--LYQFTVIVMDNGSPSLSIRTTATVRVLDVNDNAPEFVQGRTFLSIPEDTPI 798

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
           G    Q + +   D+D+G+N+ I+Y +   S+     F I+  + ++  +G L A E   
Sbjct: 799 GRPIEQYIVV---DDDIGINSLISYRLE--SSLPSIPFSIN-NNALLTVSGPLDADEGIT 852

Query: 121 QYSITVQAT--DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y+ T+ A+  D  G S    VE++ V   N  +P F  +    NV+E   + ++V  + 
Sbjct: 853 LYNFTIFASNFDGLGTSFNVSVEITDV---NDNAPQFPISPIRANVTEHVDVGTSVVQVV 909

Query: 179 VSRLASG 185
            + + SG
Sbjct: 910 ATDIDSG 916



 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 26/179 (14%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEAT 76
            R  V+  +   +  +   +LTVN+ D+N+ AP+   + P+  + GEA      + K+ AT
Sbjct: 1165 RVHVLVIKANDSIHTDNATLTVNVLDVNEFAPQF--VGPVSFEVGEANSTGDVVGKVMAT 1222

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQY--------SI 124
            D D G +  + Y +   S +GL  F +D  +G+I T   L    +  E +        S+
Sbjct: 1223 DRD-GSDT-VMYFLESNSISGL--FSLDSSTGIITTRSPLDREGLVEEGHFLPPDSSESV 1278

Query: 125  TVQATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            TV A D+G +      E ++   +   N  SPVF  ++Y   + E  ++N   A   VS
Sbjct: 1279 TVLAVDSGTRPGPLRTEQNITIRLLDINDNSPVFNPSSYTTTIPE--NVNEITALFNVS 1335



 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            V +    DR+  N   F F +IA ++   + S   S TV + D+NDN P+       + +
Sbjct: 1366 VFATSPFDREDVN--LFNFMIIATDQGNPSLSGSASATVRVTDVNDNPPQFSTNFDYERE 1423

Query: 63   AGEARR---QIVKIEATDNDLGVNAEITYSIY----HVSNTGLHKFRIDPRSGVIETTGK 115
              E  +    + +I   D+D G+NA +T +      + S +    FRI+  +G+++   +
Sbjct: 1424 VAEDTQVGAVLTQIIVVDDDQGLNAMVTITSREGDNNCSTSSECFFRIN-NNGIVQLVRQ 1482

Query: 116  LI--AGEQYSITVQATDTGGKS 135
            L     +Q+++T+ A D+G  S
Sbjct: 1483 LDYETQQQHNVTLIAVDSGSPS 1504



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 38   SLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQI-VKIEATDNDL--GVNAEITYSIYHV 93
            ++ + +NDINDN P  +P    +     +A   + + I ATDND     N+ ITYSI   
Sbjct: 977  AVIITVNDINDNPPVFMPSTINLTFPENQALGSLNITISATDNDEPGNPNSIITYSI--T 1034

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S    + F I+  +G++     L       YS+ V+  D G  +      V+V V   N 
Sbjct: 1035 SGNDGNSFSINSATGLLSLVSSLDFEVRNNYSLVVEGRDNGDPTMTGTALVNVAVTNVND 1094

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
              PV  ++  ++ V E   INS++A    + L
Sbjct: 1095 HPPVITRDV-EITVPENTPINSSLAQFNATDL 1125



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 13/148 (8%)

Query: 39   LTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +T+ L DINDN+P          I     E    +  + ATD DLG N+ I YS+  VS+
Sbjct: 1298 ITIRLLDINDNSPVFNPSSYTTTIPENVNEIT-ALFNVSATDADLGNNSVIRYSL-SVSD 1355

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                 F IDP +G +  T      +   ++  + ATD G  S       +V V   N   
Sbjct: 1356 ----DFSIDPVTGTVFATSPFDREDVNLFNFMIIATDQGNPSLSGSASATVRVTDVNDNP 1411

Query: 153  PVFQQN-TYDVNVSEGASINSTVATITV 179
            P F  N  Y+  V+E   + + +  I V
Sbjct: 1412 PQFSTNFDYEREVAEDTQVGAVLTQIIV 1439


>gi|24584875|ref|NP_724072.1| Cadherin-N, isoform C [Drosophila melanogaster]
 gi|22946726|gb|AAN10995.1| Cadherin-N, isoform C [Drosophila melanogaster]
          Length = 3095

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1584 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1643

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1644 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1703

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1704 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1752



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V A+D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRDRYRLRVSASDKG 1159

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
              +S   V+V +     N + P++ ++ Y
Sbjct: 1160 TPASAADVDVELDVVDRNNKPPIWDKSIY 1188


>gi|195035601|ref|XP_001989264.1| GH10146 [Drosophila grimshawi]
 gi|193905264|gb|EDW04131.1| GH10146 [Drosophila grimshawi]
          Length = 2305

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 793 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 852

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 853 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 912

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
           E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 913 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 971

Query: 174 VATITV 179
           + T+TV
Sbjct: 972 ILTVTV 977


>gi|149050079|gb|EDM02403.1| rCG37051 [Rattus norvegicus]
          Length = 1032

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLP------M 55
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTG 114
           IP    +       ++++ ATD D+G NAEI Y     V+      F ++  +G+I    
Sbjct: 261 IP----ENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQR 316

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSE 166
            L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE
Sbjct: 317 SLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSE 375

Query: 167 GASINSTVATITVS 180
              +N+ +A ITVS
Sbjct: 376 KDPVNTKIALITVS 389


>gi|24584873|ref|NP_724071.1| Cadherin-N, isoform D [Drosophila melanogaster]
 gi|13124002|sp|O15943.2|CADN_DROME RecName: Full=Neural-cadherin; AltName: Full=Cadherin-N;
            Short=dN-cadherin; Flags: Precursor
 gi|7298411|gb|AAF53635.1| Cadherin-N, isoform D [Drosophila melanogaster]
          Length = 3097

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1763

Query: 174  VATITV 179
            + T+TV
Sbjct: 1764 ILTVTV 1769



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|347543905|gb|AEP02525.1| CDH23, partial [Eonycteris spelaea]
          Length = 3276

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 15/186 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+     +++ +V+A +      S   +LT+ + D+ND  P   P +  + 
Sbjct: 938  VVVTTTELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVS 995

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TDND+G+NAE++Y I   +  G  KFR+  R  V+ T   L   
Sbjct: 996  VSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDG--KFRVGYRDAVVRTVVNLDRE 1053

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDV----NVSEGASI 170
                Y++ ++A D G  GK       V V V   N   P+F Q++Y+     ++ EG SI
Sbjct: 1054 TTAAYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSI 1113

Query: 171  NSTVAT 176
               +AT
Sbjct: 1114 VQLMAT 1119



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDN P  P     P  +  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1721 TVLVNVNDINDNVPTFPRDYEGPFDVTEGQPGPRVWTFLAHDQDSGPNGQVEYSI--VDG 1778

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1779 DPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1837

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + ++S VA I  S   SGC
Sbjct: 1838 DNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGC 1874



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + D+NDN P +       +   E       +V++ ATD D+G+N+ ++Y I    N
Sbjct: 1505 LQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITE-GN 1563

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
              +  FR+D  SG I T       E+ S     +TV+   T   S+ T V V++V   N 
Sbjct: 1564 EDM-TFRMDRVSGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1621

Query: 151  RSPVFQQNTYDVNVSEGA-SINSTVATITVSRLASG 185
             +PVFQQ  Y++ + EG  +IN+++ TI    L  G
Sbjct: 1622 NAPVFQQPHYEILLDEGPDTINASLITIQALDLDEG 1657



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 18/158 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRL--PMIPPIQI 61
            +LDR+  +   +    +A++  G  AS      V + + + D+ND  P+   P       
Sbjct: 2454 SLDREKKD--HYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSVY 2511

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +   A   ++ + ATD D G N E+ YS+      G+  F +D  SG++ T   L + E+
Sbjct: 2512 ENEPAGTSVITMMATDQDEGTNGELAYSL---EGPGVEAFHVDMDSGLVTTKRPLHSYER 2568

Query: 122  YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            +++TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2569 FNLTVVATDGGEPPLWGTTMLLVEVIDV---NDNRPVF 2603



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 23/174 (13%)

Query: 9   LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           LDR+ P+P +    R  +++    G     A+   ++ VNL D+NDN P    +P +   
Sbjct: 832 LDRENPDPQEAELMRKIIVSVRDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEV 891

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
           ++   A   + ++ A D D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 892 LEGTPAGVSVYQVVAVDLDEGLNGLVSYRM----RVGMPRMDFLINGSSGVVVTTTELDR 947

Query: 117 --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             IA  +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 948 ERIA--EYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPAVYNVSVSE 998



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   +IAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 520 RFTLTIIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYVGALRENEPSVTQLV 573

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITV 126
           ++ ATD D   N +ITYSI + S  G +    I    GVI  +  L    I      +TV
Sbjct: 574 RLRATDEDSPPNNQITYSIVNASAFGSYFDISIYEGYGVISVSHPLDYEQIPNGLIYLTV 633

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 634 MAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDL 690



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 30/173 (17%)

Query: 32   AASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGV 82
            + SVP   LTVN+ D+NDN P+     P  I     R          ++ + A D D G+
Sbjct: 2263 SVSVPNAKLTVNILDVNDNTPQFK---PFGITYYTERVLEGATPGTTLIAVAAVDPDKGL 2319

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
            N  ITY++  +   G  +           + GK+IA            + TV+A+D G  
Sbjct: 2320 NGLITYTLLDLVPPGYVQLED-------SSAGKVIANRTVDYEEVHWLNFTVRASDNGSP 2372

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++++  V + +V   N  +P+F Q +Y   V E   + + + T+T +   SG
Sbjct: 2373 PRAAEIPVYLEIV-DINDNNPIFDQPSYQEAVFEDVPVGTIILTVTATDADSG 2424



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L V + D NDN P   P    I + + 
Sbjct: 2019 IDREAFSPPVLELLLLAEDIGLLNGTA-----DLFVTILDDNDNWPTFSPAALTIHLLEN 2073

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  ++++ ATD D G+N E+   IY +      +F I P +GVI      I  E+  
Sbjct: 2074 CPPGFSVLQVTATDEDSGLNGEL---IYRIEAGAQDRFLIHPVTGVIRVGNATIDREEQE 2130

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T +   ++   N   P F      V+V E A   + +A +T
Sbjct: 2131 SYRLTVVATDRGTVPLSGTAIITILIDDINDCRPEFLNPIQTVSVLESAEPGTVIANVT 2189



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAG-EARRQIVK 72
            +F   V+A +           L V + D+NDN P   + PP    + I+        + +
Sbjct: 2568 RFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVF-VRPPNGTILHIREEIPLHSNVYE 2626

Query: 73   IEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + ATD D G+N  + YS    + N     F ID  SG+I+T  +L   +Q  YS+ + A+
Sbjct: 2627 VYATDKDEGLNGAVRYSFLKTTGNRDWEYFTIDSISGLIQTAQRLDREKQAVYSLILVAS 2686

Query: 130  DTG 132
            D G
Sbjct: 2687 DLG 2689



 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 29/190 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           +V  ++ LDR+     +F  +    + QG    +   + + + D+NDNAP         R
Sbjct: 78  VVWLRQPLDRE--TKSEFTVEFSVSDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVR 132

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           +P   P+          I  + ATD DLG    + YS    S      F ID   G++  
Sbjct: 133 IPENTPVGTP-------IFIVNATDPDLGAGGSVLYSFQPPS----QFFAIDSARGIVTV 181

Query: 113 TGKLIA--GEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
           T +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +
Sbjct: 182 TRELDYEITQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHS 241

Query: 169 SINSTVATIT 178
              +TV  IT
Sbjct: 242 PPGTTVRIIT 251



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND+G   E+ Y      +    +F +D  +G+I    +L     +++++T+ 
Sbjct: 471 VLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTII 526

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 527 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 558



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 15/188 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQ 62
            NLDR+         + I     G   +   ++ V + D+NDN P           P  I 
Sbjct: 1049 NLDRETTAAYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIP 1108

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
             G +   IV++ ATD D G    + Y I H  N G + FRI   SG++    + +  EQ 
Sbjct: 1109 EGHS---IVQLMATDADEGEFGRVWYRILH-GNHG-NNFRIHVSSGLLMRGPQPLDREQD 1163

Query: 123  S---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATI 177
            S   + V+A +      ++ V V V V   N  +PVF Q  Y  + + E A I ++V  +
Sbjct: 1164 SSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1223

Query: 178  TVSRLASG 185
              +   +G
Sbjct: 1224 RATDRDTG 1231



 Score = 36.2 bits (82), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
           PN G     V+A++      +  V +T+ + D NDN P     P   +   E   A   +
Sbjct: 625 PN-GLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSK-PAYFVSVVENIMAGATV 682

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
           + + ATD D          IY +   G  +FRI+ RSG I TT  L      +Y + V+A
Sbjct: 683 LFLNATDLDRSREYGQESIIYSLE--GSSQFRINARSGEITTTSLLDRETKSEYILIVRA 740

Query: 129 TDTG-GKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G G + +T I  V++ +   N   P ++   Y +N+ E    +S V T+
Sbjct: 741 VDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTV 792



 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 20/166 (12%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLG 81
           ++  + A+V  +  + + DINDNAP        +      Q G A    +++   D +LG
Sbjct: 314 DRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLG 373

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRS--GVIETTGKLIAGEQYSITVQATDTGGKSSQTI 139
           +N+   + +Y V N   H F I P S  G  +   ++     Y  TV   D    +++++
Sbjct: 374 LNS--MFEVYLVGNNS-HHFIISPTSVQGKADIRIRVAIPLDYE-TVDRYDFDLFANESV 429

Query: 140 --------VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                   V+++++   N   P+F Q  Y++++ E  ++ ++V T+
Sbjct: 430 PDHVGYAKVKITLI-NENDNRPIFSQPLYNISLYENVTVGTSVLTV 474


>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
 gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
          Length = 3639

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 14/170 (8%)

Query: 4    VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +S  +LDR+     ++  Q+ A ++ Q        +++V + D NDN PR  +   +   
Sbjct: 1947 LSARSLDRE--QHARYTLQLQASDRGQPITQQGHCNISVFVEDQNDNEPRFELSKYMASV 2004

Query: 63   AGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
              +A     ++ I+A+D DLGVN+ + YS+   +N    +F ID +SG+I T GKL    
Sbjct: 2005 PEDAAIGSSVLSIKASDADLGVNSRLVYSL---ANETQWQFAIDSKSGLITTVGKLDREL 2061

Query: 121  Q--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
            Q  YS  V ATD G    +S    V+++V+   N   P+F++  Y   V+
Sbjct: 2062 QSSYSFMVLATDCGRYEVRSGSVAVQINVL-DINDNKPIFERYPYSGQVA 2110



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 9/183 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            + ++E LDR+      +   V AR++     S    + V++ D+NDNAP +  P    + 
Sbjct: 1248 ISTREPLDREMRE--LYDLMVEARDQGTPTRSARAPVRVHVTDVNDNAPEIADPQEDVVS 1305

Query: 61   IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
            ++  +    ++V+I A D D G NA I YS+    ++  H  F ID  +G+I T   L  
Sbjct: 1306 VREEQPPGTEVVRIRAIDRDHGQNASINYSLLKGRDSDGHGLFSIDANTGLIRTRVMLDH 1365

Query: 119  GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             E+  Y + V ATD G    QT+  + V V   N   P F  ++    V E A +   V 
Sbjct: 1366 EERSIYRLAVAATDGGNPPKQTLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAVVGHVVG 1425

Query: 176  TIT 178
            +I+
Sbjct: 1426 SIS 1428



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           YLV+    LDR+  +   +   V+A +K         S+ + + D+NDNAP     +   
Sbjct: 476 YLVIVNLPLDREATS--NYTLSVVATDKGTPPLHASKSIFLRVTDVNDNAPEFEQDVYHA 533

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
             ++  +    ++++ A D D G NA ++Y++    +T    F+ID ++G+I T   +  
Sbjct: 534 NVMEVADPGTSVLQVLARDRDEGTNAALSYALADTPDTHAQWFQIDAQTGLITTRSHIDC 593

Query: 119 GEQ--YSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             +    +T+ A D GG+   S T   +  +   N   P+F Q+ Y+V+V+E   +   +
Sbjct: 594 ETEPVPQLTIIARD-GGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCI 652

Query: 175 ATITVSRLASGCAIM 189
             ++ S    G   M
Sbjct: 653 LKVSASDPDCGVNAM 667



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 11/150 (7%)

Query: 38   SLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            +L + + D+NDNAP  R      + +        I  + A+D D G NAEI YSI    N
Sbjct: 1875 TLIITIGDVNDNAPEFRPGACYGLSVPENSESSVIHTVVASDLDEGANAEIVYSIIG-GN 1933

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK-SSQTIVEVSV-VPGPNT 150
             G +KF ID R+G  E + + +  EQ   Y++ +QA+D G   + Q    +SV V   N 
Sbjct: 1934 LG-NKFNIDARTG--ELSARSLDREQHARYTLQLQASDRGQPITQQGHCNISVFVEDQND 1990

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P F+ + Y  +V E A+I S+V +I  S
Sbjct: 1991 NEPRFELSKYMASVPEDAAIGSSVLSIKAS 2020



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 25/150 (16%)

Query: 38   SLTVNLN--DINDNAPRLPMIPPIQIQAGEAR----------RQIVKIEATDNDLGVNAE 85
            S+TV L   D NDNAP+   + P +   G A             +  I A D+D G N  
Sbjct: 1628 SVTVRLRILDANDNAPQF--VVPSRSAGGAATVYVSDATRIGELVTHIVAVDSDAGENGR 1685

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQ------YSITVQATDTGGKSSQ- 137
            I+Y I  VS  G  +FRI P+SG+IE    L  A EQ      + +T++A+D G  ++Q 
Sbjct: 1686 ISYDI--VSGNGEGRFRIKPQSGIIELAKTLPPASEQLDKTGRFMLTIRASDHGAPTAQQ 1743

Query: 138  -TIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             T+    +V G ++  P F Q  Y   + E
Sbjct: 1744 TTLSLQLLVQGSHSNPPRFLQAVYQATILE 1773



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 18/175 (10%)

Query: 29   QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
            Q T+   PV     + + + D+NDNAP     M+     +  E    +    A D D G 
Sbjct: 925  QATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGAPLFAAHAHDKDSGS 984

Query: 83   NAEITYSI------YHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
            + ++TYS+       HV          F ID RSG +  +  L     +++S+ V ATD 
Sbjct: 985  SGQVTYSLKGNATQQHVKALAAGSAPLFAIDARSGHLVLSRHLDYETAQRHSLIVTATDA 1044

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G       + + V V   N   PVF+++ Y VNVSE  +IN+ +  +  S L +G
Sbjct: 1045 GLPPLSADLSILVDVQDVNDNPPVFERDEYAVNVSESRAINAQIIQVNASDLDTG 1099



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 22/196 (11%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIARE-KQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
            L+ +   LDR+  +   + F V+A +  +    S  V++ +N+ DINDN P     P   
Sbjct: 2050 LITTVGKLDRELQS--SYSFMVLATDCGRYEVRSGSVAVQINVLDINDNKPIFERYPYSG 2107

Query: 58   --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL----HKFRIDPRSGVIE 111
                 IQ G+    ++K++A D D G N E+ Y++   S         KFRI+P +G + 
Sbjct: 2108 QVAALIQPGQT---LLKVQAHDADQGANGELLYALKADSTLTTPAMRSKFRINPNTGALS 2164

Query: 112  TTGKLIA--GEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVS 165
             T  L +  G    + V A D G   +SS  ++E+ +V  PN  +P   FQ  TY   + 
Sbjct: 2165 ATQSLASETGRLLQLEVIARDKGNPPQSSVGLIEL-LVGEPNPVAPALHFQNETYRTKLR 2223

Query: 166  EGASINSTVATITVSR 181
            E +   + +  +   R
Sbjct: 2224 ENSPAGTRLLHVAAVR 2239



 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
           +  +IAR+      S   ++ V ++D+NDN P        + +   E   R I+K+ A+D
Sbjct: 600 QLTIIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 659

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D GVNA + Y++       L +F +   SG I   G+L    +  Y   V ATD GG S
Sbjct: 660 PDCGVNAMVNYTLGE-GFKHLTEFEVRSASGEICIAGELDYERRNSYEFPVLATDRGGLS 718

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           +  ++++ +    + R PVF    Y+V++ E
Sbjct: 719 TTAMIKLQLTDVNDNR-PVFYPREYNVSLRE 748



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 24/170 (14%)

Query: 34   SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSI 90
            S  +S+ V++ D+NDN P         +   E+R    QI+++ A+D D G NA ITY I
Sbjct: 1050 SADLSILVDVQDVNDNPPVFER-DEYAVNVSESRAINAQIIQVNASDLDTGNNARITYRI 1108

Query: 91   YHV----------------SNTGL-HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
                               S+  L   F I P SG I     L   + ++Y +TV ATD 
Sbjct: 1109 VDAGTDNASQSLASVGGGGSDADLAQHFGIFPNSGWIYLRAALDRESRDRYELTVLATDN 1168

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G  ++     V V V   N   P FQ+ +Y+  + E     + V  ++ S
Sbjct: 1169 GTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEENLRRGAVVGVVSAS 1218



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 22/175 (12%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI------QAGEARRQIV 71
           + F V+A ++ G + +  + L   L D+NDN P   P    + +      QAG     IV
Sbjct: 705 YEFPVLATDRGGLSTTAMIKL--QLTDVNDNRPVFYPREYNVSLRESGPAQAGGTPMPIV 762

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG----EQYSITVQ 127
            + ATD D G   +++Y I   +  G+  FRID  SG I      +        + + + 
Sbjct: 763 AVVATDPDAGSFGQVSYRIVAGNEAGI--FRIDRASGEIFVIRPDMLSVRTQAMHMLNIS 820

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
           ATD GG   S+  +V +S++     R P+F++  Y+  V E    G  + S +AT
Sbjct: 821 ATDGGGLRTSTDAVVFLSIIDA-QQRPPIFEKARYNYYVKEDVPRGTVVGSVIAT 874



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 11/131 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSN- 95
              ++L+D NDNAP+ P+   +   A        + + +A+D D G   ++ YS+    + 
Sbjct: 2901 FQLSLHDENDNAPQFPLGEYVHFLAENEPLGSSVFRGQASDLDRGAFGQLNYSLVPADDV 2960

Query: 96   ---TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPN 149
               +    FR+D  +G++ ++  +   EQ   Y + ++A+D GG+S++  V +  +   +
Sbjct: 2961 DDDSSWRLFRVDAVTGIV-SSAAVFDYEQRQRYHLQLRASDMGGRSARVAVRIE-IESRD 3018

Query: 150  TRSPVFQQNTY 160
              +P F + TY
Sbjct: 3019 EFTPQFTERTY 3029



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 13/171 (7%)

Query: 16   PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVK 72
            P + R  ++AR  +    S    L V L D NDN+P+      +   A E   +   + +
Sbjct: 2336 PHELRLVLVARTTEAPFLSSYAELVVELEDENDNSPQFSQRQFVAT-AWEGNSKGTFVAQ 2394

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQAT 129
            ++A D D G NA + Y I  V     + F I+P  SG++ T   L     + YS+ + AT
Sbjct: 2395 VQAFDADEGANARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDVYSLKIIAT 2452

Query: 130  DTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    +  + + V +V   N   P F  N   V+VSE   + + +A+++
Sbjct: 2453 DEGVPQMTGTSTIRVHIV-DVNDNQPTFPPNNV-VSVSEATELGAVIASLS 2501



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            LVV+++ LDR+  +  +   + +         S  +++ + + D+NDNAPR P   PI++
Sbjct: 1478 LVVARQ-LDRELQSEFRLEIRALDTSASNNPQSSAITVKIEVADVNDNAPRWPK-DPIEL 1535

Query: 62   QAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVS---NTGLHK----FRIDPRSGVIE 111
            +  E+      +    ATD D G N E+ Y +   +   N  L +    F +D  +G + 
Sbjct: 1536 EVSESLPVGAILHNFTATDADSGTNGELQYRLLRYTPQLNESLEQISPLFALDSLTGSLS 1595

Query: 112  TTGKLI--AGEQYSITVQATD 130
                L   + ++Y + VQA D
Sbjct: 1596 LQAPLDFESLQEYLLIVQALD 1616



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 28/191 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR---------- 52
            +V K  LD +     +++ ++IA +    A +   +LTV + D NDNAPR          
Sbjct: 2538 LVLKRRLDYEQQQ--EYQLEIIASDAAHEART---TLTVRVTDENDNAPRFLAERPPAYF 2592

Query: 53   --LPMIPPIQIQAGEARRQIVKIEATDNDL-GVNAEITYSIYHVSNTGLHKFRIDPRSGV 109
              LP    +   +     +++ + ATD D  G N++++Y I       L  F I   +GV
Sbjct: 2593 ALLPAATELLESSSSMDVELLSVNATDADAEGRNSQLSYHI----EPPLAGFSIHATTGV 2648

Query: 110  I-----ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPN-TRSPVFQQNTYDVN 163
            +     + +  + +   Y +++ A D G         + V PG + +    FQQ  Y   
Sbjct: 2649 VSVNISQLSAAVSSSGDYFLSIVARDAGKPQLSGNTLLRVQPGDSGSGRQQFQQTQYRAQ 2708

Query: 164  VSEGASINSTV 174
            +SE A + + V
Sbjct: 2709 ISEAAPLGAVV 2719



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
            LDR+  +  ++   V+A +    AA     + V + D NDN P+        +I+    R
Sbjct: 1151 LDRESRD--RYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEENLRR 1208

Query: 68   RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
              +V +  A+D DLG NA I YS+   +++    F++ P +G I T   L     E Y +
Sbjct: 1209 GAVVGVVSASDADLGENAAIRYSLLPANSS----FQVHPVTGEISTREPLDREMRELYDL 1264

Query: 125  TVQATDTG--GKSSQTIVEVSV 144
             V+A D G   +S++  V V V
Sbjct: 1265 MVEARDQGTPTRSARAPVRVHV 1286



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 37  VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           +++ + + D+NDN P     R     P     G +   ++++ A+D D   N  + Y+I 
Sbjct: 292 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 348

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +     FRID R+G +     L     E + + V A D G +  +T   VS+ V   
Sbjct: 349 RRQSDKEQMFRIDARTGAVYINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 408

Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
           N   P    +F        +SE A     VA I+V
Sbjct: 409 NDNQPTINVIFLSEDASPKISESAQPGEFVARISV 443


>gi|194758880|ref|XP_001961686.1| GF15089 [Drosophila ananassae]
 gi|190615383|gb|EDV30907.1| GF15089 [Drosophila ananassae]
          Length = 3097

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1763

Query: 174  VATITV 179
            + T+TV
Sbjct: 1764 ILTVTV 1769



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDADSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y   V A D G   KS    V V      N   P F Q  Y  NV E A  N+ V
Sbjct: 819 NNNAYYEFMVTAKDKGEPAKSGTATVRV-YTKNKNDEEPKFSQQVYTPNVDENAGPNTLV 877

Query: 175 ATITVS 180
            T+  S
Sbjct: 878 TTVVAS 883



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQSESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|24584881|ref|NP_724075.1| Cadherin-N, isoform E [Drosophila melanogaster]
 gi|22946729|gb|AAN10998.1| Cadherin-N, isoform E [Drosophila melanogaster]
          Length = 3097

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1763

Query: 174  VATITV 179
            + T+TV
Sbjct: 1764 ILTVTV 1769



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V A+D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRDRYRLRVSASDKG 1159

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
              +S   V+V +     N + P++ ++ Y
Sbjct: 1160 TPASAADVDVELDVVDRNNKPPIWDKSIY 1188


>gi|24584871|ref|NP_724070.1| Cadherin-N, isoform F [Drosophila melanogaster]
 gi|22946725|gb|AAN10994.1| Cadherin-N, isoform F [Drosophila melanogaster]
          Length = 3096

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            E+   YSI V A D GG        +  V   N   P F ++ +   V E
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDE 1753



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++ +       ++K+ ATD D GVN ++ YSI    
Sbjct: 954  VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878

Query: 176 TITVS 180
           T+  S
Sbjct: 879 TVVAS 883



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  E Y +   A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
                   VEV + V       PV+    Y  + V E   +   V +I  S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209


>gi|326914028|ref|XP_003203331.1| PREDICTED: protocadherin-9-like [Meleagris gallopavo]
          Length = 1032

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P      
Sbjct: 626 VIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNTSFK 685

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I    K
Sbjct: 686 LVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITLEEK 740

Query: 116 LIAGE--QYSITVQATDTGG-KSSQTIVEV 142
               +   + + V  +D G  KS  T+V V
Sbjct: 741 PTPNDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P       +++
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKE-SQVEV 259

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
              E       ++++ ATD D+G NAEI Y     V+      F ++  +G+I     L 
Sbjct: 260 HIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRFFALNNTTGLITVQRSLD 319

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE   
Sbjct: 320 REETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSEKDP 378

Query: 170 INSTVATITVS 180
           +N+ +A ITVS
Sbjct: 379 VNTKIALITVS 389


>gi|198475483|ref|XP_002132931.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
 gi|198138844|gb|EDY70333.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
          Length = 3116

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1604 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1663

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1664 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1723

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASI-NST 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1724 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1782

Query: 174  VATITV 179
            + T+TV
Sbjct: 1783 ILTVTV 1788



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++  A      ++K+ ATD D GVN ++ YSI    
Sbjct: 973  VVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGS-PVIKVVATDEDKGVNGQVKYSIVQQP 1031

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1032 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1090

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1091 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1122



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 727 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 784

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D+D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 785 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 837

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                Y   V A D G      +  V V     N   P F Q  Y  NV E A  N+ V 
Sbjct: 838 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 897

Query: 176 TITVS 180
           T+  S
Sbjct: 898 TVVAS 902



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1060 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1119

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V+A D G
Sbjct: 1120 SASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWI-VLKKPLDRDRYRLRVRAQDKG 1178

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
               S   V+V +     N + P++ ++ Y
Sbjct: 1179 QPPSYADVDVELDVVDRNNKPPIWDKSVY 1207


>gi|395526460|ref|XP_003765381.1| PREDICTED: protocadherin-16 [Sarcophilus harrisii]
          Length = 3095

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 12/192 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIP 57
           YLV     LDR+  +   +  +V A +          +L + + D+NDNAP   RL   P
Sbjct: 208 YLVCVARRLDREEQD--AYELRVTATDAGTPPLRAEAALVLLVTDVNDNAPAFDRLLYQP 265

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
               +       + ++ A D D G N  + YSI  V  T  H F ID  +GVI T   L 
Sbjct: 266 EPLPEVVLPGSFVARVTARDPDQGPNGNVAYSI--VPGTHAHWFAIDASTGVITTAAPLD 323

Query: 118 --AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                +  +TV ATD G    SS  +V V V+   N   PVF++  Y+ ++ EG +  + 
Sbjct: 324 YELEPRPQLTVLATDGGQPALSSTAVVHV-VLQDVNDNEPVFKRTFYNASLPEGTAPGTC 382

Query: 174 VATITVSRLASG 185
              +T +   SG
Sbjct: 383 FLQVTATDADSG 394



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 22/182 (12%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEAT 76
            R +++ + + G +    V LT++L D NDNAPR  + P       E+R     ++K+EA 
Sbjct: 1932 RLRLVLQAESGGSFGFTV-LTLSLQDANDNAPRF-LKPHYAAFVPESRPLSGPLLKVEAD 1989

Query: 77   DNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            D D G   ++TYS+     T GL  F IDP  G I TT  L   I  E   + V ATD G
Sbjct: 1990 DLDQGPGGQVTYSLAPSHATRGL--FHIDPAMGTITTTAILDREIWAET-RLVVMATDRG 2046

Query: 133  -----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
                 G ++ T++ +      N   P   Q  +++ V E A + S +A +T + + SG A
Sbjct: 2047 SPPLVGSATLTVLVIDA----NDNRPTIPQ-PWEIQVPEDALLGSEIARVTGNDVDSGPA 2101

Query: 188  IM 189
            + 
Sbjct: 2102 LW 2103



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 64/135 (47%), Gaps = 12/135 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
            LTV++ D+ND AP  P      +   E R     ++ + ATD DLGVN ++TY    VS 
Sbjct: 1425 LTVSVVDVNDEAPTFPQAA-YHVHVPENRPPGTTVLTLHATDPDLGVNGQVTYG--GVSG 1481

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                 F +DP +GV+ T   L   EQ  I  TV A D G     + V V V V   N  +
Sbjct: 1482 D---TFSLDPNTGVLTTRQVLDREEQQEINLTVYAQDGGSPPLLSHVSVHVTVEDENDHA 1538

Query: 153  PVFQQNTYDVNVSEG 167
            P F  +   + V EG
Sbjct: 1539 PAFGSSHLSLEVPEG 1553



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIP--- 57
            V ++ +LDR+     +  +Q++ + + G A     + TV++   D+NDN+P         
Sbjct: 954  VTTRRSLDRE----QQSSYQLLVQVQDGGAPPRSTTGTVHVMVLDLNDNSPTFLHTLGAA 1009

Query: 58   ----PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+Q+  G     +V +++A D D G N  I YS+   +  G   F + P SG + T
Sbjct: 1010 GGGFPVQVLEGIPPGSLVTRLQAKDPDEGENGTILYSM---TGPGSELFLLHPHSGELST 1066

Query: 113  TGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
             G L  +    Y +TV A D G     T +++ +   P TR
Sbjct: 1067 AGPLSRLERPHYVLTVNAQDQGNPPRSTSLQLLLQVLPRTR 1107



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 28/145 (19%)

Query: 41  VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V L D+NDNAP  P       +PP    AG     +  + ATD D G N  +T+++    
Sbjct: 668 VLLEDVNDNAPAFPSPTDTVWLPP---DAGPG-TPVYTLRATDPDSGSNGHVTFTLV--- 720

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS 152
             G   F +DP +G ++   + + G    + ++A D+G    +S+ ++ V+V     +R+
Sbjct: 721 AGGKGAFAVDPATGHVQLV-RPLGGLAQELELEARDSGSPPLTSRFLLRVAVQEA-GSRA 778

Query: 153 -----------PVFQQNTYDVNVSE 166
                      P F  +TY+V +SE
Sbjct: 779 GGTDTGVGGGIPKFDHSTYNVELSE 803



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 37   VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            VS+ V + D ND+AP        +++  G+  + +  + A+D D+G N +I Y I +   
Sbjct: 1525 VSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQTLTVLRASDPDIGPNGQINYQILNGDV 1584

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
            +G   F +D  SG + T   L   A   + + V A D G    S+  +V V+V+   N  
Sbjct: 1585 SG--AFILDAVSGTLGTARSLDREAEPSFQLLVAARDGGQPALSATMLVTVAVLDA-NDH 1641

Query: 152  SPVFQQNTYDVNVSEGA 168
            +P F   +Y V V E A
Sbjct: 1642 APTFTAPSYTVEVPEDA 1658



 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
            ++  ++AR+ Q   ++   +LT+ + D+NDN P        Q+   E       I+ I A
Sbjct: 2138 YQLHLLARDGQHEGSA---NLTIQVEDVNDNVPTFSQSL-YQVTLAEHTTPGSAILTISA 2193

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG---VIETTGKLIAG-EQYSITVQATDT 131
            TD D G N  ++Y +  VS+     F IDP +G   +I+   + + G     + ++A D 
Sbjct: 2194 TDLDSGDNGRVSYHL--VSSA--EGFDIDPSNGTLFMIQAASQSLGGLGTVDMVLEARDH 2249

Query: 132  G--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            G   +++Q  V + +    N  +P F Q  Y + V+E     STV
Sbjct: 2250 GVPRRTAQATVHIQLQ-DENDYTPSFVQPYYHITVAEDLPPGSTV 2293



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 7/152 (4%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQ-IVKIEATD 77
           +  V+A +    A S    + V L D+NDN P          +  G A     +++ ATD
Sbjct: 331 QLTVLATDGGQPALSSTAVVHVVLQDVNDNEPVFKRTFYNASLPEGTAPGTCFLQVTATD 390

Query: 78  NDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
            D G    ++YS+   +S+TG   F+IDP +G + T+  L   +    +  TV A D GG
Sbjct: 391 ADSGPFGLLSYSLGAGLSSTGPPPFQIDPHTGEVCTSRSLDRDQGPPSFDFTVTAVDGGG 450

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
             S   V+V  V   N   P F    Y  +VS
Sbjct: 451 LKSLVYVKV-FVSDENDNRPEFYPRIYAASVS 481



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 29/174 (16%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---------PIQIQAGEARRQIVKI 73
             +A + QG+      ++ V++ D ND+ PRL   P         P    AG       +I
Sbjct: 867  AVAGDGQGSLTGT-ATVRVSIQDRNDHGPRLTEEPTFLAVAENQPPGTTAG-------RI 918

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
             ATD D G N  +TY +    +     F I P++G + T   L   +Q  Y + VQ  D 
Sbjct: 919  TATDRDSGPNGHLTYHLLQPPDES-GAFHIHPQTGEVTTRRSLDREQQSSYQLLVQVQDG 977

Query: 132  GG--KSSQTIVEVSVVPGPNTRSPVFQQ------NTYDVNVSEGASINSTVATI 177
            G   +S+   V V V+   N  SP F          + V V EG    S V  +
Sbjct: 978  GAPPRSTTGTVHVMVL-DLNDNSPTFLHTLGAAGGGFPVQVLEGIPPGSLVTRL 1030



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
             F+  V AR+    A S  + +TV + D ND+AP     P   ++  E       ++++E
Sbjct: 1610 SFQLLVAARDGGQPALSATMLVTVAVLDANDHAPTF-TAPSYTVEVPEDAPPGTLLLQLE 1668

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            A D D G N  +    Y++       F ++P SG + T   L    Q  Y   V A D G
Sbjct: 1669 AHDPDAGANGRVA---YYLGEGAGGAFLLEPGSGELRTAVPLDRERQARYGFVVHAVD-G 1724

Query: 133  GKSSQTIVEVSV 144
              +      VSV
Sbjct: 1725 AAAGPLSASVSV 1736



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 20   RFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRLPMIP------PIQIQAGEAR--- 67
            R+  +     G AA   S  VS+T+ + D+ND+AP  P  P      P +   G+     
Sbjct: 1714 RYGFVVHAVDGAAAGPLSASVSVTITVRDVNDHAPAFPASPLRLRLRPTRTALGQGSSGP 1773

Query: 68   RQIVKIEATDNDLGVNAEITYSI 90
              +  + A D D G NA I Y +
Sbjct: 1774 HFLATLRAEDRDAGANASILYRL 1796



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 14/168 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
            ++   V A ++     S  V + + + D+NDN P     P  ++   E      +++++ 
Sbjct: 2355 EYNLTVCAADRGKPPRSTSVLVVITVQDVNDNPPVFAQ-PHYRVAVPEDTPVGTELLRVA 2413

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G +  + ++I   S    H F +D  SG +    +L   A  Q+ + V+A D  
Sbjct: 2414 ASDADPGPHGLVYFTI--SSGDPAHLFELDESSGALRLARQLDREAQAQHQLVVEAADPP 2471

Query: 133  GKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G     +   VEV  V   N   P F   T   ++ E     + + T+
Sbjct: 2472 GAHFALVPVTVEVQDV---NEHGPAFPLLTLSASLPENQPPGTLITTL 2516



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 21/157 (13%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            V +TV + D+N++ P  P++    + A     Q     I  + A D D G   ++ Y++ 
Sbjct: 2478 VPVTVEVQDVNEHGPAFPLL---TLSASLPENQPPGTLITTLHALDKDTGAFGQLHYTLL 2534

Query: 92   H------VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVS 143
                   +  T    F ++  SG +             + + V A D G  S+   + V 
Sbjct: 2535 EPGLGQGLGATHWDMFALNGSSGELRARVPFDYEHTRSFRLLVGAADAGNLSASVTLSV- 2593

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGA----SINSTVAT 176
            +V G +   PVF   ++   V EGA    S+   +AT
Sbjct: 2594 LVTGEDEYDPVFLAPSFHFQVPEGARRGYSLGHVLAT 2630



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 15/172 (8%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEAT 76
            R  V+A ++         +LTV + D NDN P +P   P +IQ  E      +I ++  T
Sbjct: 2037 RLVVMATDRGSPPLVGSATLTVLVIDANDNRPTIPQ--PWEIQVPEDALLGSEIARV--T 2092

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
             ND+     + Y +      G   F +    G I  T  L       Y + + A D   +
Sbjct: 2093 GNDVDSGPALWYVLNPPGTQG--PFSVGRYGGRISLTEPLDFEHMDCYQLHLLARDGQHE 2150

Query: 135  SSQTI-VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S  + ++V  V   N   P F Q+ Y V ++E  +  S + TI+ + L SG
Sbjct: 2151 GSANLTIQVEDV---NDNVPTFSQSLYQVTLAEHTTPGSAILTISATDLDSG 2199


>gi|347543915|gb|AEP02530.1| CDH23, partial [Rousettus leschenaultii]
          Length = 3276

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 15/186 (8%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+     +++ +V+A +      S   +LT+ + D+ND  P   P +  + 
Sbjct: 938  VVVTTTELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVS 995

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TDND+G+NAE++Y I   +  G  KFR+  R  V+ T   L   
Sbjct: 996  VSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDG--KFRVGYRDAVVRTVVNLDRE 1053

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDV----NVSEGASI 170
                Y++ ++A D G  GK       V V V   N   P+F Q++Y+     ++ EG SI
Sbjct: 1054 TTAAYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSI 1113

Query: 171  NSTVAT 176
               +AT
Sbjct: 1114 VQLMAT 1119



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDN P  P     P  +  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1721 TVLVNVNDINDNVPTFPRDYEGPFDVTEGQPGPRVWTFLAHDQDSGPNGQVEYSI--VDG 1778

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1779 DPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1837

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + ++S VA I  S   SGC
Sbjct: 1838 DNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGC 1874



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + DINDN P +       +   E       +V++ ATD D+G+N+ ++Y I    N
Sbjct: 1505 LQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITE-GN 1563

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
              +  FR+D  SG I T       E+ S     +TV+   T   S+ T V V++V   N 
Sbjct: 1564 EDM-TFRMDRVSGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1621

Query: 151  RSPVFQQNTYDVNVSEGA-SINSTVATITVSRLASG 185
             +PVFQQ  Y++ + EG  ++N+T+ TI    L  G
Sbjct: 1622 NAPVFQQPHYEILLDEGPDTVNTTLITIQAQDLDEG 1657



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 18/158 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRL--PMIPPIQI 61
            +LDR+  +   +    +A++  G  AS      V + + + D+ND  P+   P       
Sbjct: 2454 SLDREKKD--HYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSVY 2511

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +   A   ++ + ATD D G N E+ YS+      G+  F +D  SG++ T   L + E+
Sbjct: 2512 ENEPAGTSVITMMATDQDEGTNGELAYSL---EGPGVEAFHVDMDSGLVTTKRPLHSYER 2568

Query: 122  YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            +++TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2569 FNLTVVATDGGEPPLWGTTMLLVEVIDV---NDNRPVF 2603



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 23/174 (13%)

Query: 9   LDRDPPNPG------KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           LDR+ P+P       K    V    K    A+   ++ VNL D+NDN P    +P +   
Sbjct: 832 LDRENPDPQEAELMRKIIVSVTDCGKPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEV 891

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
           ++   A   + ++ A D D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 892 LEGTPAGVSVYQVVAVDLDEGLNGLVSYRM----QVGMPRMDFLINSSSGVVVTTTELDR 947

Query: 117 --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             IA  +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 948 ERIA--EYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPAVYNVSVSE 998



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 9/123 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAG-EARRQIVK 72
            +F   V+A +           L V + D+NDN P   + PP    + I+     R  + +
Sbjct: 2568 RFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVF-VRPPNGTILHIREEIPLRSNVYE 2626

Query: 73   IEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + ATD D G+N  + YS    + N     F IDP SG+I+T  +L   +Q  YS+ + A+
Sbjct: 2627 VYATDKDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVAS 2686

Query: 130  DTG 132
            D G
Sbjct: 2687 DLG 2689



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   +IAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 520 RFTLTIIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYVGALRENEPSVTQLV 573

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITV 126
           ++ ATD D   N +ITYSI + S  G +    +    GVI  +  L    I      +TV
Sbjct: 574 RLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSHPLDYEQIPNGLIYLTV 633

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 634 MAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDL 690



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 30/173 (17%)

Query: 32   AASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGV 82
            + SVP   LTVN+ D+NDN P+     P  I     R          ++ + A D D G+
Sbjct: 2263 SVSVPNAKLTVNILDVNDNTPQFK---PFGITYYTERVLEGATPGTTLIAVAAVDPDKGL 2319

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
            N  ITY++  +   G  +           + GK+IA            + TV+A+D G  
Sbjct: 2320 NGLITYTLLDLVPPGYVQLED-------SSAGKVIANRTVDYEEVHWLNFTVRASDNGSP 2372

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++++  V + +V   N  +P+F Q +Y   V E   + + + T+T +   SG
Sbjct: 2373 PRAAEIPVYLEIV-DINDNNPIFGQPSYQEAVFEDVPVGTVILTVTATDADSG 2424



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L V + D NDN P   P    I + + 
Sbjct: 2019 IDREAFSPPVLELLLLAEDIGLLNGTA-----DLFVTILDDNDNWPTFSPAALTIHLLEN 2073

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  ++++ ATD D G+N E+   IY +      +F I P +GVI      I  E+  
Sbjct: 2074 CPPGFSVLQVTATDEDSGLNGEL---IYRIEAGAQDRFLIHPVTGVIRVGNATIDREEQE 2130

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T +   ++   N   P F      V+V E A   + +A +T
Sbjct: 2131 SYRLTVVATDRGTVPLSGTAIITILIDDINDCRPEFLNPIQTVSVLESAEPGTVIANVT 2189



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 29/190 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           +V  ++ LDR+     +F  +    + QG    +   + + + D+NDNAP         R
Sbjct: 78  VVWLRQPLDRE--TKSEFTVEFSVSDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVR 132

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           +P   P+          I  + ATD DLG    + YS    S      F ID   G++  
Sbjct: 133 IPENTPVGTP-------IFIVNATDPDLGAGGSVLYSFQPPS----QFFAIDSARGIVTV 181

Query: 113 TGKLIA--GEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
           T +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +
Sbjct: 182 TRELDYEITQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHS 241

Query: 169 SINSTVATIT 178
              +TV  IT
Sbjct: 242 PPGTTVRIIT 251



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND+G   E+ Y      +    +F +D  +G+I    +L     +++++T+ 
Sbjct: 471 VLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTII 526

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 527 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 558



 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 15/188 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQ 62
            NLDR+         + I     G   +   ++ V + D+NDN P           P  I 
Sbjct: 1049 NLDRETTAAYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIP 1108

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
             G +   IV++ ATD D G    + Y I H  N G   FRI   SG++    + +  EQ 
Sbjct: 1109 EGHS---IVQLMATDADEGEFGRVWYRILH-GNHG-SNFRIHVSSGLLMRGPQPLDREQD 1163

Query: 123  S---ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATI 177
            S   + V+A +      ++ V V V V   N  +PVF Q  Y  + + E A I ++V  +
Sbjct: 1164 SSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1223

Query: 178  TVSRLASG 185
              +   +G
Sbjct: 1224 RATDRDTG 1231



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 14  PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
           PN G     V+A++      +  V +T+ + D NDN P     P   +   E   A   +
Sbjct: 625 PN-GLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSK-PAYFVSVVENIMAGATV 682

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQA 128
           + + ATD D          IY +   G  +FRI+ RSG I TT  L      +Y + V+A
Sbjct: 683 LFLNATDLDRSREYGQESIIYSLE--GSSQFRINARSGEITTTSLLDRETKSEYILIVRA 740

Query: 129 TDTG-GKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G G + +T I  V++ +   N   P ++   Y +N+ E    +S V T+
Sbjct: 741 VDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTV 792


>gi|344236522|gb|EGV92625.1| Protocadherin-9 [Cricetulus griseus]
          Length = 1032

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLP------M 55
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDLNDNRPVFKEGQVEVH 260

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTG 114
           IP    +       ++++ ATD D+G NAEI Y     V+      F ++  +G+I    
Sbjct: 261 IP----ENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQR 316

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSE 166
            L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE
Sbjct: 317 SLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSE 375

Query: 167 GASINSTVATITVS 180
              +N+ +A ITVS
Sbjct: 376 KDPVNTKIALITVS 389


>gi|403255713|ref|XP_003920556.1| PREDICTED: protocadherin alpha-13 [Saimiri boliviensis boliviensis]
          Length = 950

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 37  VSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-V 93
           V L + + D+NDNAP     +     ++    R  ++K+ ATD D G N +I YS    V
Sbjct: 226 VQLLITILDVNDNAPEFYQSVYKVTVLENAFNRTLVIKLNATDPDEGTNGDIVYSFRRPV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG----GKSSQTIVEVSVVPG 147
           S   L+ F I+P +G I T GKL   E+  Y I+V+A D G          +VEV  V  
Sbjct: 286 SPAVLYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVDKGNIPMAGHCTLLVEVLDV-- 343

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P     +  + + E  S ++ +A I+VS   SG
Sbjct: 344 -NDNAPEVTITSLSLPIREDTSPSAIIALISVSDRDSG 380



 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 15/127 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+      S  V+L V + D NDNAP L  + P    AG    ++V       
Sbjct: 531 LQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPAL--LTPRAGSAGSTVSELVPRSAGAG 588

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L  I   ++ + 
Sbjct: 589 HVVAKVRAVDADSGYNAWLSYELQPAAVGARIPFRVGLYTGEISTTRTLDEIDAPRHRLL 648

Query: 126 VQATDTG 132
           V   D G
Sbjct: 649 VLVKDHG 655



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 27/145 (18%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
           V + DINDN P  P          E++++I+  E            A+D D+GVN+ +TY
Sbjct: 121 VEVKDINDNPPMFP----------ESKKRIIIAESRPSATRFPLDGASDADIGVNSALTY 170

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            +    Y   +T   + ++   S V+  T      +++S+ + A+D G       V++ +
Sbjct: 171 RLDPNDYFALDTQNSREQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLI 230

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGA 168
            +   N  +P F Q+ Y V V E A
Sbjct: 231 TILDVNDNAPEFYQSVYKVTVLENA 255


>gi|347543901|gb|AEP02523.1| CDH23, partial [Aselliscus stoliczkanus]
          Length = 3138

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDN P  P     P ++  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1719 TVLVNVNDINDNVPTFPRDYEGPFEVTEGQPGPRVWTFLAHDRDSGPNGQVEYSI--VDG 1776

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1777 DPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1835

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + ++S VA I  S   SGC
Sbjct: 1836 DNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGC 1872



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 11/191 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+     +++ +V+A +      S   +LT+ + D+ND  P   P++  + 
Sbjct: 936  VVVTTTELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPVVYNVS 993

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TDND+G+NAE++Y I   +  G  KF +  R  V+ T   L   
Sbjct: 994  VSEDVPRDFRVVWLNCTDNDIGLNAELSYFITAGNVDG--KFSVGYRDAVVRTVVGLDRE 1051

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y++ ++A D G  GK       V + V   N   P+F Q++Y+ +V E      ++
Sbjct: 1052 TTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPEDIPEGHSI 1111

Query: 175  ATITVSRLASG 185
              +T +    G
Sbjct: 1112 VQLTATDADEG 1122



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 18/157 (11%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            LDR+  +   +    IAR+  G  AS      V + + + D+ND  P    P       +
Sbjct: 2453 LDREKKD--HYILTAIARDNPGDIASNRRENSVQVVIQVLDVNDCRPEFSKPQYSTSVYE 2510

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
               A   ++ + ATD D G NAE+ YS+      G+  F +D  SG++ T   L + E++
Sbjct: 2511 NEPAGTSVITMMATDQDEGSNAELAYSL---EGPGMEAFHVDKDSGLVTTQRPLRSYERF 2567

Query: 123  SITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            ++TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2568 NLTVVATDGGEPPLWGTTMLLVEVIDV---NDNRPVF 2601



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 23/174 (13%)

Query: 9   LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           LDR+ P+P +    R  +++    G     A+   ++ VNL D+NDN P    +P +   
Sbjct: 830 LDRENPDPHEAELMRKIIVSVRDCGRPPLKATSSATVFVNLLDLNDNDPIFQNLPFVAEV 889

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKL-- 116
           ++   A   + ++ ATD D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 890 LEGTPAGVSVYQVVATDLDEGLNGLVSYRM----QVGMPRLDFLINSSSGVVVTTTELDR 945

Query: 117 --IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             IA  +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 946 ERIA--EYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPVVYNVSVSE 996



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L + + D NDN P   P    I + + 
Sbjct: 2017 IDREAFSPPILELLLLAEDIGLLNGTA-----DLFITILDDNDNWPTFDPAALTIHLLEN 2071

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  I+++ ATD D G+N E+   IY +      +F I P +G+I      I  E+  
Sbjct: 2072 CPPGLSILQVTATDEDSGLNGEL---IYRIEAGAQDRFHIHPVTGIIRVGNVTIDREEQE 2128

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T++   ++   N   P F      V+V E A   + +A +T
Sbjct: 2129 SYRLTVVATDRGTVPLSGTVIITILIDDVNDCRPEFINPIQTVSVLESAEPGTVIANVT 2187



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAG-EARRQIVK 72
            +F   V+A +           L V + D+NDN P   + PP    + I+     R  + +
Sbjct: 2566 RFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVF-VRPPNGTILHIKEEIPLRSNVYE 2624

Query: 73   IEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + ATD D G+N  + YS      N     F IDP SG+I+T  +L    Q  YS+ + A+
Sbjct: 2625 VYATDQDEGLNGAVRYSFLKSTGNRDWEFFTIDPISGLIQTALRLDRETQAVYSLILVAS 2684

Query: 130  DTG 132
            D G
Sbjct: 2685 DLG 2687



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + D+NDN P +       +   E       +V+++ATD D+G+N+ ++Y I   ++
Sbjct: 1503 LQVTILDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVKATDRDIGINSVLSYYITEGND 1562

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
                 FR+D  SG I T       E  S     +TV+   T   S+ T V V++V   N 
Sbjct: 1563 D--MTFRMDRISGEITTRPAPPDREHQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1619

Query: 151  RSPVFQQNTYDVNVSEGA-SINSTVATITVSRLASG 185
             +P+FQQ  Y++ + EG  +IN+++ T+    L  G
Sbjct: 1620 NAPMFQQPYYEILLDEGPDTINASLVTVQALDLDEG 1655



 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 74/178 (41%), Gaps = 20/178 (11%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   VIAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 518 RFTLTVIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYMGALRENEPSVTQLV 571

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKL----IAGEQYSIT 125
           ++ ATD D   N  ITYSI   S+ G + F I    G  VI     L    I      +T
Sbjct: 572 RLRATDEDSPPNNLITYSIIFASSFGSY-FDISVYEGYAVISVNHPLDYEQIPNGLIYLT 630

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           V A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 631 VMAKDAGNPPLNSTVPVTIEVFDENDNPPTFNKPAYFVSVVENIMAGATVLFLNATDL 688



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND G   E+ Y  Y   N    +F +D  +G+I    KL     +++++TV 
Sbjct: 469 VLTVLATDNDAGTFGEVNY--YFSDNA--DRFSLDKDTGLILLIAKLDYELIQRFTLTVI 524

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 525 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 556



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 30/173 (17%)

Query: 32   AASVP-VSLTVNLNDINDNAPRLPMIPPIQI--------QAGEARRQIVKIEATDNDLGV 82
            A S+P   LTVN+ D+NDN P+     P  I        +       ++ + A D D G+
Sbjct: 2261 AVSMPDAKLTVNILDVNDNTPQF---KPFGITYYTEQVLEGATPGTTLIAVSAVDPDKGL 2317

Query: 83   NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
            N  ITY++      G  +           + GK+IA            + TV+A D G  
Sbjct: 2318 NGLITYTLLDQMPPGYVQLE-------DSSAGKVIANRTVDYEEVHWLNFTVRAADNGSP 2370

Query: 134  -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             ++++  V + +V   N  +P+F Q +Y   + E   + + +  +T +   SG
Sbjct: 2371 PRAAEIPVYLEIV-DINDNNPIFDQPSYQEAIFEDIPVGTVILRVTATDADSG 2422



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 29/190 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           +V  ++ LDR+     +F  +    + QG        + + + D+NDNAP         R
Sbjct: 78  VVWLRQPLDRE--TVSEFIVEFSVSDHQGVITR---KVNIQVGDVNDNAPTFHNQPYSVR 132

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           +P   P+          I  + ATD DLG    + YS    S      F ID   G++  
Sbjct: 133 IPEDTPVG-------TPIFIVNATDPDLGAGGSVLYSFQPPS----EFFAIDSARGIVTV 181

Query: 113 TGKLI--AGEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
             +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +
Sbjct: 182 IQELDYETTQSYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHS 241

Query: 169 SINSTVATIT 178
              +TV  IT
Sbjct: 242 PPGTTVRVIT 251



 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 17/151 (11%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYS 89
            V + V + D+ND AP        Q  +  A R+       ++ + ATD D G    +TY 
Sbjct: 1182 VRVIVYVEDVNDEAPVFTQ----QQYSRLALRETAGIGTSVLVVRATDRDTGPGGLVTYR 1237

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPG 147
            I   +     KF ID  +G+I T   L    +  Y + V ATD     +Q    V +   
Sbjct: 1238 ILSGAE---GKFEIDESTGLITTVDYLDYETKTSYLMNVSATDQAPPFNQGFCTVYITLL 1294

Query: 148  PNTRSPV-FQQNTYDVNVSEGASINSTVATI 177
                 PV F   +Y+V + E  ++ + +  +
Sbjct: 1295 NELDEPVQFSNASYEVAILENLALGTEIVRV 1325


>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
 gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
          Length = 4983

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 2947 NINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIR 3006

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
            +  I+  D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + Y ITV 
Sbjct: 3007 VTAID--DKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNYFITVT 3062

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G    SSQ  V ++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3063 AKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3114



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T +L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLT-RL 1903

Query: 117  IAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +  E    Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + ST
Sbjct: 1904 LDYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGST 1962

Query: 174  VATITVSRLASG 185
            V    V+    G
Sbjct: 1963 VLVFNVTDADDG 1974



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F V+A + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVVATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  V      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--VKGNEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S   + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3180 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3238

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3239 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3296

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3297 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3325



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P I +I    + R+I+ + A 
Sbjct: 2636 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAM 2695

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2696 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSP 2753

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E +S+  TV  +T S
Sbjct: 2754 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSSLGYTVTRVTTS 2799



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2733 LDRE--KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSSLG 2790

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2791 YTVTRVTTSDEDVGINAISRYSIMDAS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2846

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S VA +
Sbjct: 2847 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVAQV 2896



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2453 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2507

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2508 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2566

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TIT S L
Sbjct: 2567 PKVRAKEQTF--MFPENQPVSSLVTTITGSSL 2596



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 26/147 (17%)

Query: 38  SLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           SL + +NDIND+ P               PP    +G        I ATD D G+NA + 
Sbjct: 460 SLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSGLNANLR 511

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           YSI  VS  GL  F I   SG++ T  +G L      Q  + + A D G     +  ++ 
Sbjct: 512 YSI--VSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARDQGVHPKVSYAQLV 569

Query: 144 V-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           V +   N   PVF Q   YDV+V E A
Sbjct: 570 VTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRQ 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVVATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3285 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3342

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3343 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3402

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3403 -PPVFTLNVYSVQISEGVPIGTHVTFVS 3429



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+NDN     +P+L  IP   PI          + K +ATD D G N+ I Y++
Sbjct: 2037 VSIILLDVNDNPPTFLSPKLTYIPENTPIDTV-------VFKAQATDPDSGPNSYIEYTL 2089

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVP-G 147
                N   +KF I    G +  TG+L   E   Y++TV ATD G  S  +  EV VV   
Sbjct: 2090 L---NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVVVLD 2146

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P+F Q  Y V ++E
Sbjct: 2147 INDNNPIFAQALYKVEINE 2165



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N EI Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 22/185 (11%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
            ++LDR+     +F   + A +    A +   ++ V ++D+NDN P          IP   
Sbjct: 2320 QSLDRETKE--RFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP--- 2374

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       ++ + A+D D   NA I+Y I      G  +F I+P +G I T+  L    
Sbjct: 2375 -EDAPTGTDVLLVNASDADASTNAVISYRII----GGNSQFTINPSTGQIITSALLDRET 2429

Query: 119  GEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             + Y++ V  +D G     SS T V V+V    N   P FQ + Y  ++       S V 
Sbjct: 2430 KDNYTLVVVCSDAGSPEPLSSSTSVLVTVT-DVNDNPPRFQHHPYVTHIPSPTLPGSFVF 2488

Query: 176  TITVS 180
             +TV+
Sbjct: 2489 AVTVT 2493



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      + +  N+ D+NDN P   +       ++       ++    TD 
Sbjct: 1912 YILTVRAEDGGGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA 1971

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            D G+N+++TYSI   S   L +F +D ++GV++    L    Q  Y++ VQ  D
Sbjct: 1972 DDGINSQLTYSI--ASGDSLGQFTVD-KNGVLKVLKALDRESQSFYNLVVQVHD 2022


>gi|395504756|ref|XP_003756713.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
          Length = 792

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 45  DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDNAP     P  +++  E       +V I A D D G NAEI YS++H S   +  F
Sbjct: 234 DINDNAPIFTQ-PQYEVRIPENNSIGSLVVTISAEDLDTGKNAEILYSLFHSSEEIIKTF 292

Query: 102 RIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNT 159
            ++P SG I    KL     ++Y + ++ TD GG S +  V V V+   N  +P    ++
Sbjct: 293 EVNPISGDIRLRKKLDFETIQRYEVDIEGTDGGGLSGKCTVIVHVI-DLNDNAPELTMSS 351

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
               + E A   + VA  ++S L SG
Sbjct: 352 LTNPIPENAP-ETVVAVFSISDLDSG 376



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 14/174 (8%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPPIQIQAGEARRQIVKIEAT 76
           R++V      G   S   ++ V++ D+NDNAP L M     PI   A E    +  I  +
Sbjct: 314 RYEVDIEGTDGGGLSGKCTVIVHVIDLNDNAPELTMSSLTNPIPENAPETVVAVFSI--S 371

Query: 77  DNDLGVNAEITYSIYH----VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
           D D G N  +  SI      +    +  F      G ++   K     QY++ +  TD G
Sbjct: 372 DLDSGENGRLVCSIQEDIPFILQPSIENFYALVTEGALDRENK----AQYNVMITVTDLG 427

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
               ++   ++V +   N   PVF Q  Y + + E  S    + +++ +   SG
Sbjct: 428 FPRLKSEYNITVFISDVNDNPPVFTQTEYTLYLKENNSPAFHLGSVSANDRDSG 481


>gi|354474310|ref|XP_003499374.1| PREDICTED: protocadherin-9-like isoform 2 [Cricetulus griseus]
          Length = 1203

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDLNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
          Length = 4981

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIR 3004

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
            +  I+  D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + Y ITV 
Sbjct: 3005 VTAID--DKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNYFITVT 3060

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G    SSQ  V ++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3061 AKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3112



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T +L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLT-RL 1903

Query: 117  IAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +  E    Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + ST
Sbjct: 1904 LDYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGST 1962

Query: 174  VATITVSRLASG 185
            V    V+    G
Sbjct: 1963 VLVFNVTDADDG 1974



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F V+A + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVVATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  V      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--VKGNEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S   + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P I +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E +S+  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSSLGYTVTRVTTS 2797



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSSLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDVGINAISRYSIMDAS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S VA +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVAQV 2894



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTITGSSL 2594



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 26/147 (17%)

Query: 38  SLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           SL + +NDIND+ P               PP    +G        I ATD D G+NA + 
Sbjct: 460 SLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSGLNANLR 511

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           YSI  VS  GL  F I   SG++ T  +G L      Q  + + A D G     +  ++ 
Sbjct: 512 YSI--VSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARDQGVHPKVSYAQLV 569

Query: 144 V-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           V +   N   PVF Q   YDV+V E A
Sbjct: 570 VTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRQ 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVVATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNVYSVQISEGVPIGTHVTFVS 3427



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+NDN     +P+L  IP   PI          + K +ATD D G N+ I Y++
Sbjct: 2037 VSIILLDVNDNPPTFLSPKLTYIPENTPIDTV-------VFKAQATDPDSGPNSYIEYTL 2089

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVP-G 147
                N   +KF I    G +  TG+L   E   Y++TV ATD G  S  +  EV VV   
Sbjct: 2090 L---NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVVVLD 2146

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P+F Q  Y V ++E
Sbjct: 2147 INDNNPIFAQALYKVEINE 2165



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N EI Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      + +  N+ D+NDN P   +       ++       ++    TD 
Sbjct: 1912 YILTVRAEDGGGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA 1971

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            D G+N+++TYSI   S   L +F +D ++GV++    L    Q  Y++ VQ  D
Sbjct: 1972 DDGINSQLTYSI--ASGDSLGQFTVD-KNGVLKVLKALDRESQSFYNLVVQVHD 2022


>gi|195117884|ref|XP_002003475.1| GI22312 [Drosophila mojavensis]
 gi|193914050|gb|EDW12917.1| GI22312 [Drosophila mojavensis]
          Length = 3328

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)

Query: 9    LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
            LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P         + G 
Sbjct: 1730 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1789

Query: 66   ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
            A   ++ + A D D    G NA + YSI        TG   F I+P +GVI+T    +  
Sbjct: 1790 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1849

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
            E+   YSI V A D GG        +  V   N   P F ++ +  +V+ ++G ++    
Sbjct: 1850 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1908

Query: 174  VATITV 179
            + T+TV
Sbjct: 1909 ILTVTV 1914



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 39   LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            + V + D+NDN P         P ++  A      ++K+ ATD D GVN ++ YSI    
Sbjct: 993  VVVFITDVNDNKPVFKDCGTYYPKVEEGAPNGS-PVIKVVATDEDKGVNGQVKYSIVQQP 1051

Query: 95   NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
            N    KF +D  +G + +T K+       G+  S+TV+ATD G  S + +   +V +   
Sbjct: 1052 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1110

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 1111 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1142



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
           ++KE    D   P  +   V A E  G   S  V LT+ + D+NDNAP+  + P  Q   
Sbjct: 747 LAKELDFEDLRQPHVYTLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL-PDYQAHN 804

Query: 64  GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +        I++++A D D G NAEI Y +          F +D  +G+I    +L A 
Sbjct: 805 VDEDIPLGTSILRVKAMDADSGANAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 857

Query: 120 EQ---YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y   V A D G   KS    V V      N   P F Q  Y  NV E A  N+ V
Sbjct: 858 NNNAYYEFIVTAKDKGEPAKSGTATVRV-YTKNKNDEEPKFSQQVYTPNVDENAGPNTLV 916

Query: 175 ATITVS 180
            T+  S
Sbjct: 917 TTVVAS 922



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
            GKF    +    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 1080 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1139

Query: 74   EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
             A+D D   N  I YS+    N   L  F I   SG I    K +  ++Y + V+A+D G
Sbjct: 1140 SASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWI-VLKKPLDRDRYRLRVRASDRG 1198

Query: 133  GKSSQTIVEVSVVPGP-NTRSPVFQQNTY 160
               S   V+V +     N + P++ ++ Y
Sbjct: 1199 DPPSYADVDVELDVVDRNNKPPIWDKSIY 1227


>gi|345328644|ref|XP_001507571.2| PREDICTED: protocadherin beta-16-like [Ornithorhynchus anatinus]
          Length = 808

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 8/187 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
           +V  + LDR+     +F   + A +      S    + V + DINDNAP    +   +QI
Sbjct: 194 LVLDKTLDRE--QQAEFHLTITALDGGSPPRSGTAEIHVLVVDINDNAPEFTQLRYEVQI 251

Query: 62  QAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG- 119
                   +V I  A D+D G   E+ Y+ +H S    H F I+P SG I   GKL    
Sbjct: 252 PENSPEGSLVSIVSAQDSDAGNYGEVKYTFFHASEEIRHSFEINPVSGEIRVVGKLDFEF 311

Query: 120 -EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            + Y I ++A D G  S +  + V V+   N  SP    ++    + E  S  + VA  +
Sbjct: 312 RQSYEIEIEARDGGDLSGKCTLLVQVI-DENDNSPAITMSSITSPIPEN-SPETVVALFS 369

Query: 179 VSRLASG 185
           +  L SG
Sbjct: 370 IRDLDSG 376


>gi|301605091|ref|XP_002932182.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Xenopus (Silurana) tropicalis]
          Length = 2766

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 14/192 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +   LDR+  +   FR  V  R+    + +   +LTV ++D ND+ P        + 
Sbjct: 158 VVTTSGELDRETKSTHVFR--VTVRDGGIPSRTAMATLTVTVSDTNDHDPNFEQQEYRET 215

Query: 62  --QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +  E   +++ + ATD D   NA I Y +    + G   F IDPRSGVI   G +   
Sbjct: 216 VRENMEVGYEVMTVRATDGDSLGNANIAYRLI---SGGREVFEIDPRSGVIRILGPVDRE 272

Query: 120 E--QYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
           E   Y + V+A D G     +SS   V +++    N  +P F +  Y   VSE +SI S 
Sbjct: 273 EIASYQLVVEANDQGHDPGPRSSTATVHITI-QDENDNAPQFSEKRYVARVSEDSSIESQ 331

Query: 174 VATITVSRLASG 185
           +  +T +    G
Sbjct: 332 LLVVTATDCDQG 343



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I ATD D G NA I Y    ++  GL +F IDP +G + TT +L   +Q  Y++ V 
Sbjct: 644 VVVISATDEDTGENARIAY----LAEEGLPQFAIDPETGAVTTTMELDYEDQVSYTLAVT 699

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G   KS  T +E+ V+   N   PVFQ+ +Y  +V E +   ++V  ++ +   SG
Sbjct: 700 AHDHGIPQKSDTTYLEILVI-DVNDNPPVFQRASYKGSVPEDSPPYTSVLQVSATDRDSG 758



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
           + + D NDNAP+      +   + ++    Q++ + ATD D G NA + YSI   ++ GL
Sbjct: 301 ITIQDENDNAPQFSEKRYVARVSEDSSIESQLLVVTATDCDQGANAAVHYSILSGNSRGL 360

Query: 99  HKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSP 153
             F IDP +G I   G L    G +Y++ V+A D GG+   S+ T + +  V   N  +P
Sbjct: 361 --FSIDPLTGAIFLAGTLDFETGREYTLRVRAQD-GGRPPLSNVTGLVIIQVLDVNDNAP 417

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F    +  +V E A I  +V  +      SG
Sbjct: 418 NFVSGPFQASVLENAPIGYSVLQVQALDADSG 449



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 32/160 (20%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRL------- 53
           +V +   LDR+  N  ++R  V A +K        P  + V + D+NDNAP         
Sbjct: 785 IVRTLRQLDRE--NVVEYRLTVYAVDKGHPLPHRTPAEVLVTVLDVNDNAPVFAREELEV 842

Query: 54  ------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRS 107
                 P+ PP+            +I ATD D G NA+I Y I  V       F++D  S
Sbjct: 843 KVFENSPLGPPL-----------ARITATDPDEGPNAQIMYQI--VEGNIPEVFQLDIFS 889

Query: 108 GVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVV 145
           G +    +L   E  +Y+I VQAT +    S+ IV V +V
Sbjct: 890 GELTALVELDYEERSEYTIVVQAT-SAPLVSRAIVRVCLV 928



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
           ++++ ATD D G+N  I Y+ +   + G   F ++  SG++ T  +L      +Y +TV 
Sbjct: 747 VLQVSATDRDSGLNGRIFYT-FAGGDDGDGDFTVEYTSGIVRTLRQLDRENVVEYRLTVY 805

Query: 128 ATDTGGK-SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G     +T  EV V V   N  +PVF +   +V V E + +   +A IT +
Sbjct: 806 AVDKGHPLPHRTPAEVLVTVLDVNDNAPVFAREELEVKVFENSPLGPPLARITAT 860



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           D+NDNAP          +  E       ++ + A D D    A ITY I   +    H+F
Sbjct: 514 DVNDNAPEFTQ-SEYHARLNEDAAVGSSVLTVWAADRD--AYATITYQI--TAGNTRHRF 568

Query: 102 RIDPRSGVIETTGKLIAG--------EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            I   S + ++ G L            Q+ +T+ A+D  G  S T   +  V   NT  P
Sbjct: 569 SI---SSLSDSQGLLTLALPLDYKLERQFVLTITASD--GMRSDTARAIVNVTDANTHRP 623

Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           VFQ + Y V+V E     +TV  I+ +   +G
Sbjct: 624 VFQSSHYTVSVKEDQPAGTTVVVISATDEDTG 655



 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 8/114 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
           +V++ A+D D G + ++ YS+  + ++     F +D  +GV+ T+G+L     +   + +
Sbjct: 118 VVQLRASDPDEGESGKLEYSMDALFDSRSASYFSLDSNTGVVTTSGELDRETKSTHVFRV 177

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           TV+  D G  S   +  ++V V   N   P F+Q  Y   V E   +   V T+
Sbjct: 178 TVR--DGGIPSRTAMATLTVTVSDTNDHDPNFEQQEYRETVRENMEVGYEVMTV 229


>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
          Length = 2711

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            F F VIA + QG    +    TV+  + DINDNAP+           ++     Q++++ 
Sbjct: 1175 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKFVKDFYQATISESAANLTQVLRVS 1233

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G N  I YS+  V      +F ID  SG +   GKL   A   YS+ +QA D+G
Sbjct: 1234 ASDVDEGNNGLIHYSV--VKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSG 1291

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              S  +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1292 AVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 16/173 (9%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGE-ARRQIVKI 73
           +   V+A +      S    + V+L D+NDN+P   +  P+Q    IQ  E     I  +
Sbjct: 655 YSLLVLATDLGSPPQSSVARINVSLLDMNDNSP---VFYPVQYFAHIQENEPGGSYITTV 711

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
            ATD DLG+N  I YSI   S     +F+++ +SGVI T   L   E+  Y + V ATD 
Sbjct: 712 SATDPDLGLNGTIKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQVVATDG 768

Query: 132 GGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           G   S  Q +V ++V+   +   PVF Q  Y   V E  ++   V +++ S +
Sbjct: 769 GNLQSPNQAVVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVSASTM 820



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 13/165 (7%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
            LDR+      +   V+A +K   + S    +TV + DINDN P        Q++  E   
Sbjct: 2040 LDRE--EVSNYTLTVVATDKGHPSLSSSTEVTVMVLDINDNNPVFAQ-ALYQVEMNENTL 2096

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---Y 122
                I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y
Sbjct: 2097 TGTDIIQVYAADGDEGTNGQVRYGI--VDGNANQEFRIDSVTGAI-TVAKPLDREKTPVY 2153

Query: 123  SITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            S+TVQATD G         VS+V    N   P+F+ + Y V+V E
Sbjct: 2154 SLTVQATDRGSTPRTDTATVSIVLLDSNDFVPIFELSPYSVHVPE 2198



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P        ++   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPQGYEVSVVENAPTGTELLVLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G     
Sbjct: 612 LGDNGTVRFSLQE-AETDQRSFRLDPVSGRLSTISSLDREEQSFYSLLVLATDLGSPPQS 670

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++  ++V +   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SVARINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 714



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 12/188 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND++P+   P+     
Sbjct: 1752 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHSPKFSRPVYSFDI 1806

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D GVN EITYS+      G+  F ++P +GV   T  L   A
Sbjct: 1807 PEDTTPGSLVAAILATDDDSGVNGEITYSVNEDDEDGI--FFLNPVTGVFNLTRILDYEA 1864

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +TV+A D GG+ +   V  +++   N   P+F  ++Y  ++ E   + STV    
Sbjct: 1865 QQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSSSSYSTSLMENLPLGSTVLVFN 1923

Query: 179  VSRLASGC 186
            V+    G 
Sbjct: 1924 VTDADDGI 1931



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 5/128 (3%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+I+ + AT
Sbjct: 2564 KYVVWIEARDGGFPPFSSYEKLDIAVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAT 2623

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    H F ID  +G I +   L   +  QY +T++++D G  
Sbjct: 2624 DKDSGPNGQLDYDI--VNGNKEHSFSIDHATGEIRSIRPLDREKVSQYVLTIKSSDKGSP 2681

Query: 135  SSQTIVEV 142
            S  + VEV
Sbjct: 2682 SQSSSVEV 2689



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 17/178 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  +  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ + G +   G L +    Y + + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKDGHVSLLGPLDVHAGSYQLEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
            D G  + S +++    V   N   PVF Q +Y+V +SE   +NS    +      SG 
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDKDSGA 1027



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VS+  LDR+   P +++  V  ++K        + + V + DINDN P   +      Q
Sbjct: 202 LVSEGGLDREV-TP-QYQLLVEVKDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG          ++++ A D D G NA+I Y +          F+IDP +G+I     L 
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQIDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQALDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2381 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGAF---VFAVTVTDADIGPNSELHYSL-- 2435

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V
Sbjct: 2436 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFV 2489



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 26/147 (17%)

Query: 38  SLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
           SL + +NDIND+ P               PP    +G        + ATD D G+NA + 
Sbjct: 460 SLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSG--------VSATDGDSGLNANLR 511

Query: 88  YSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQTIVEVS 143
           YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     +  ++ 
Sbjct: 512 YSI--VSGNGLGWFHISEHSGLVTTGAAGGLDREVASQIVLNISARDQGVHPKVSYAQLV 569

Query: 144 V-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           V +   N   PVF Q   Y+V+V E A
Sbjct: 570 VTLLDVNDEKPVFSQPQGYEVSVVENA 596



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN P    +   ++   E+     +  K+
Sbjct: 960  GSYQLEILASDMGVPQLSSSVILTVYVHDVNDNPPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A D D G N EI YSI    N G   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QAFDKDSGANGEIAYSIAE-GNIG-DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYSFYFEEEQKAGSFVGKVS 1123



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
           ++ + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD D+G N    
Sbjct: 113 SSPTYPTEVRVLVWDLNDNAPVFPD-PSIIVTFKEDSSSGRQVILDTATDADIGSNGVDH 171

Query: 88  YSIYHVSNTGLHKFRIDPR---SG-------VIETTGKLIAGEQYSITVQATDTGGKSSQ 137
           +S   V      +FR+D     SG       V E         QY + V+  D G    +
Sbjct: 172 HSYRIVQGNEEGRFRLDITLNPSGEGAFLHLVSEGGLDREVTPQYQLLVEVKDKGEPKRR 231

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             ++V+V V   N   PVF  + Y   V E A++ S+V  +  +    G 
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAADADEGT 281



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 32/199 (16%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQ 60
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             +
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYSFYFEEE 1112

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN-----------TGLHKFRIDPRSGV 109
             +AG     + K+ A D D G N E+ YS   V             T  H+F    R  +
Sbjct: 1113 QKAGSF---VGKVSAVDKDFGPNGEVRYSFEMVQPDFELHALSGEITNTHQFD---RESL 1166

Query: 110  IETTGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            +   G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE
Sbjct: 1167 MRRRGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFVKDFYQATISE 1221

Query: 167  GASINSTVATITVSRLASG 185
             A+  + V  ++ S +  G
Sbjct: 1222 SAANLTQVLRVSASDVDEG 1240



 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQT 138
            G NA +TY+I   ++     FRIDP SG +  T +L      +YS+ V+A D G +SS  
Sbjct: 1726 GANALVTYTIISGAD---DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDM 1781

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             + ++ V   N  SP F +  Y  ++ E  +  S VA I  +   SG 
Sbjct: 1782 RINIT-VSDVNDHSPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1828



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D+NDN P       L   P   I +      +  + A D D G N E+ Y I  
Sbjct: 1515 VTILVTDLNDNVPVFISQNALAADPSAVIGS-----VLTTVMAADPDEGANGEVEYEII- 1568

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+      
Sbjct: 1569 --NGDTDTFVVDRFSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLD 1625

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             PVF Q  Y   + EG  I + V +I
Sbjct: 1626 GPVFTQPKYITILKEGEPIGTNVISI 1651



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVS 94
            +L +++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   +
Sbjct: 1300 TLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGTN 1358

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            N G   F I P +G I    KL    Q  Y + + A D G
Sbjct: 1359 NHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQG 1396



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 22/165 (13%)

Query: 7    ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
            ++LDR+      F   V A +    A +   ++ V ++D+NDN P          IP   
Sbjct: 2248 QSLDRETKE--HFVLIVTATDSGSPALTGTGTINVIVDDVNDNVPTFASKLYFTTIP--- 2302

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       ++ + A+D D   NA I+Y I      G  +F I+P +G I T+  L    
Sbjct: 2303 -EDAPTGTDVLLVNASDADTSTNAVISYRIIG----GNSQFTINPSTGQIITSALLDRET 2357

Query: 119  GEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTY 160
             E Y++ V ++D G     SS T V V+V    N   P FQ + Y
Sbjct: 2358 RENYTLVVVSSDAGSPGPLSSSTSVLVTVT-DVNDNPPRFQHHPY 2401


>gi|355688167|gb|AER98413.1| FAT tumor suppressor-like protein 1 [Mustela putorius furo]
          Length = 1538

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           +++++ A   D+  NAEITYSI  +S     KF ID ++G I     L   +  +Y +TV
Sbjct: 407 EVLQVYAASRDIEANAEITYSI--ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTV 464

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +ATD G  S   +  V++ V   N  SPVF Q+TY   +SE A +  +V T+
Sbjct: 465 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTAVISEDALLEQSVITV 516



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 11/164 (6%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
           + ++ +   G       +L + L D+NDNAP     +      +  E    + +++ATD 
Sbjct: 252 YNLLVKATDGGGRFCQANLVLTLEDVNDNAPEFSADLYAITVFENTEPGTLLTRVQATDA 311

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---G 133
           D G+N +I+YS+   ++    +F I+  SG+I+    L   +Q  Y++T++ATD G    
Sbjct: 312 DAGLNQKISYSLIDSADG---QFSINELSGIIQLEKPLDREQQAVYTLTLKATDQGLPRR 368

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++ + V VSV+   N   PVF+   Y   VSE   I + V  +
Sbjct: 369 LTATSTVVVSVL-DINDNPPVFEYREYGATVSEDILIGTEVLQV 411



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 21/174 (12%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
           + V  K+ LDR+  +   +   + A +  GT +S  + + V + D NDN+P         
Sbjct: 135 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 189

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
            IP    +     + I+++ ATD D+  NA++TY+++     G  KF+++P +G ++T  
Sbjct: 190 TIP----EDAFPGKLILQVSATDADIRSNADMTYTLF---GPGAEKFKLNPDTGELKTLA 242

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            L   EQ  Y++ V+ATD GG+  Q  + V  +   N  +P F  + Y + V E
Sbjct: 243 PLDREEQAIYNLLVKATDGGGRFCQANL-VLTLEDVNDNAPEFSADLYAITVFE 295



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
           ENLD +  +  ++   V A +    + S   ++ +N+ DINDN+P         + + +A
Sbjct: 450 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTAVISEDA 507

Query: 67  --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
              + ++ + A D D   N+ I YSI    N G   F IDP  G ++ T KL+  E    
Sbjct: 508 LLEQSVITVMADDTDGPSNSHIRYSIID-GNQG-SPFTIDPTRGEVKVT-KLLDRETISG 564

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           Y++TVQA+D G         V++ V   N  +PVF +  Y V + E   +  +V  + V+
Sbjct: 565 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRENYSVIIQENKPVGFSVLQLVVT 624


>gi|327267819|ref|XP_003218696.1| PREDICTED: protocadherin-9-like isoform 2 [Anolis carolinensis]
          Length = 1203

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFTFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +    A S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKAVDGGQPARSSTAKVTINVMDVNDNSPVVIYPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPP 58
           L+  +  LDR+  +  K    V      G++     ++T+N+ D+NDN P + +   I P
Sbjct: 311 LITVQRALDREETSIHK----VTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISP 366

Query: 59  IQIQAGEARR-----QIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSG 108
           I      + +     +I  I  +D D  VN ++   I     +H+     +++ ++  S 
Sbjct: 367 INGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLE-TSS 425

Query: 109 VIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +++  G     ++++  + A+D+G  S +QT +    +   N   P+F Q   +++VSE 
Sbjct: 426 LLDYEGT----KEFTFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSEN 481

Query: 168 ASINSTVATITVSRLASG 185
                 + TI+ +   SG
Sbjct: 482 NRRGLYLTTISATDEDSG 499



 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 32/198 (16%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKESQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NA++ Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGNNADVRYIFGAQVAPATKRLFALNNTTGLI- 312

Query: 112 TTGKLIAGEQYSI---TVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDV 162
           T  + +  E+ SI   TV A+D     ++  V ++V       P  + R  +   N   V
Sbjct: 313 TVQRALDREETSIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TV 371

Query: 163 NVSEGASINSTVATITVS 180
            +SE   IN+ +A ITVS
Sbjct: 372 YLSEKDPINTKIALITVS 389


>gi|291242490|ref|XP_002741140.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Saccoglossus kowalevskii]
          Length = 2761

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 11/169 (6%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
           +R  + A++      S   ++ +N+ D+NDN PR P     Q    E  R    I+ ++A
Sbjct: 576 YRLVIRAQDSGRPPKSNSTNVVINVEDVNDNEPRFPST-LYQTSVREDLRIGSSIINLQA 634

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            D D G+ +++TYSI +   TG + F I+  SG+I TT +L      +Y     A D G 
Sbjct: 635 FDEDSGLFSQLTYSISNAP-TG-NPFSINENSGMIVTTRELDRETTSRYDFVAVAQDQGD 692

Query: 134 --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             KS+ T + ++++   N   P F Q+ Y+V V E A   ++VAT+T +
Sbjct: 693 PPKSATTQISITIL-DVNDNPPTFTQSEYNVVVEEDARPGTSVATVTAT 740



 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 22/189 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLP 54
           LV +K  LDR+  N     F++ A +      S    L +N+ D+ND+ P       +LP
Sbjct: 348 LVTTKSVLDRE--NMDVHFFRITATDGGIPERSDTTILQINVEDLNDHPPIFENAAYQLP 405

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
           +   +     +    I++I ATD+D+G N++I YSI +  +     FRID  +GVI T  
Sbjct: 406 IRENV-----DPGTTIIEIRATDDDIGSNSDIRYSIIN-PDAPNDVFRIDQGTGVITTRS 459

Query: 115 KLIAGE--QYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           +L      QY I V A D G     +S+ T V V ++   N   P F Q TY+V + E  
Sbjct: 460 RLDRETVVQYIIEVLAVDLGSNPGPQSASTEVTVDIL-DENDNYPQFSQRTYEVIIPESI 518

Query: 169 SINSTVATI 177
           S N  + +I
Sbjct: 519 SPNVVIESI 527



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 10/120 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V + ATD D+G NA ITYS+ ++      +F ID  +G I T  +L    +  Y++ V 
Sbjct: 836 VVVVHATDGDVGENARITYSMDNIP-----EFEIDEDTGAILTKMELDRETKLSYTLHVT 890

Query: 128 ATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           A D G K     T VE++V+   N   PVF++++Y   + E  S  ++V  I+      G
Sbjct: 891 AQDNGLKPQLDTTDVEITVI-DVNDNYPVFKESSYRGEIREDVSKGTSVIRISAEDADEG 949



 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 15/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
           S    +TV++ D NDN P+       +I P  I        I+   ATD D G NAEI Y
Sbjct: 486 SASTEVTVDILDENDNYPQFSQRTYEVIIPESISPNVVIESII---ATDRDEGTNAEIRY 542

Query: 89  SIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG--KSSQTIVEVSV 144
           S+    + G   F ID  SG I    ++       Y + ++A D+G   KS+ T V ++ 
Sbjct: 543 SMVGGHSQG--HFAIDSFSGQITVISRIDYEITSNYRLVIRAQDSGRPPKSNSTNVVIN- 599

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           V   N   P F    Y  +V E   I S++  +      SG
Sbjct: 600 VEDVNDNEPRFPSTLYQTSVREDLRIGSSIINLQAFDEDSG 640



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++V+   LDR+  +  ++ F  +A+++     S    +++ + D+NDN P         +
Sbjct: 666 MIVTTRELDRETTS--RYDFVAVAQDQGDPPKSATTQISITILDVNDNPPTFTQSEYNVV 723

Query: 62  QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLI 117
              +AR    +  + ATD D    + ++Y I   +    ++F I  + G  VI     L 
Sbjct: 724 VEEDARPGTSVATVTATDAD--EESSVSYQI--TAGNTRNRFSIISQMGLGVISVALPLD 779

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             ++  + +TV A+D    S   +V +++    NT  PVF+Q+ Y V+V E     STV 
Sbjct: 780 YKQEQRFVLTVTASDNA-LSDNCLVYINI-SDANTYRPVFEQSPYSVSVDEDVPTGSTVV 837

Query: 176 TI 177
            +
Sbjct: 838 VV 839



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 9/134 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            L+ +   LDR+      +  +  A ++        V++ + + D+NDN+P+    +  ++
Sbjct: 976  LIRTDARLDRE--EVAVYNLEAYATDRGTPQRRTSVNIEITVKDVNDNSPKFRSAVINVE 1033

Query: 61   IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            I        +V  I ATD D G+NA + +SI          F +D +SG + T+ ++   
Sbjct: 1034 INENSPIGSLVDTIVATDPDEGMNAVVAFSIVGGDE---QFFALDYQSGQLTTSAEMNYE 1090

Query: 120  E--QYSITVQATDT 131
            E  +Y + V+AT T
Sbjct: 1091 ERNEYEVIVRATST 1104


>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
          Length = 4981

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIR 3004

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
            +  I+  D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + Y ITV 
Sbjct: 3005 VTAID--DKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNYFITVT 3060

Query: 128  ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            A D G    SSQ  V ++V    N  +P F Q+     + E  S+ S V T++
Sbjct: 3061 AKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHMSATIPESHSVGSIVRTVS 3112



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D GVN EITY +      G+  F ++P +GV   T +L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLT-RL 1903

Query: 117  IAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            +  E    Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + ST
Sbjct: 1904 LDYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGST 1962

Query: 174  VATITVSRLASG 185
            V    V+    G
Sbjct: 1963 VLVFNVTDADDG 1974



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F V+A + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FSFTVVATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G     +   +++ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+      +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)

Query: 23   VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
            VI RE+Q          G   +    + + + D+NDN+P  L  I  + + +  +A   I
Sbjct: 853  VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHNI 912

Query: 71   VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
             + +A D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+
Sbjct: 913  FQAKAVDPDEGVNGMVLYSL---KQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEILAS 969

Query: 130  DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            D G  + S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 970  DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   EQ  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S   + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
             S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236

Query: 95   NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
            ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V+V + G N  
Sbjct: 3237 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEY 3294

Query: 152  SPVFQQNTYDVNVSEGASINSTVATITVS 180
             P F    Y   +SE A   + V  +  S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   + S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P I +I    + R+I+ + A 
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E +S+  TV  +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSSLGYTVTRVTTS 2797



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 38   SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             S     KF IDP  G I   G L    + + +V   D G   K+  T V V  V   + 
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
                 ++ T+     E   ++S V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTITGSSL 2594



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSSLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   +      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDVGINAISRYSIMDAN----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V A D+G   S  +     V   N  +P F + +Y ++  E   I S VA +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVAQV 2894



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T  +G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMMQPDFELHAISGEITNTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FSFTVVATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  N Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLNVYSVQISEGVPIGTHVTFVS 3427



 Score = 44.7 bits (104), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG      + + G L      QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N EI Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 32   AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
            + ++P++ T  LN    D NDN P  P    + +   E  R    +  + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
            ++ YSI   +N G   F I P +G I    KL    Q  Y + + A D G     + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + V   N   P F       ++ E   I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500



 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
            + +  R + G      + +  N+ D+NDN P   +       ++       ++    TD 
Sbjct: 1912 YILTVRAEDGGGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA 1971

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
            D G+N+++TYSI   S   L +F +D ++GV++    L    Q  Y++ VQ  D
Sbjct: 1972 DDGINSQLTYSI--ASGDSLGQFTVD-KNGVLKVLKALDRESQSFYNLVVQVHD 2022


>gi|363729170|ref|XP_003640607.1| PREDICTED: protocadherin-9 [Gallus gallus]
          Length = 1018

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P      
Sbjct: 626 VIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNTSFK 685

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P+    G     + ++ A D D G+NAE+ Y+I + +N GL  FRIDP +G I    K
Sbjct: 686 LVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVNGNNKGL--FRIDPVTGNITLEEK 740

Query: 116 LIAGE--QYSITVQATDTG-GKSSQTIVEV 142
               +   + + V  +D G  KS  T+V V
Sbjct: 741 PTPNDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P       +++
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKE-SQVEV 259

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
              E       ++++ ATD D+G NAEI Y     V+      F ++  +G+I     L 
Sbjct: 260 HIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRFFALNNTTGLITVQRSLD 319

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE   
Sbjct: 320 REETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSEKDP 378

Query: 170 INSTVATITVS 180
           +N+ +A ITVS
Sbjct: 379 VNTKIALITVS 389


>gi|347543911|gb|AEP02528.1| CDH23, partial [Hipposideros armiger]
          Length = 3209

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 38   SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            ++ VN+NDINDN P  P     P ++  G+   ++    A D D G N ++ YSI  V  
Sbjct: 1719 TVLVNVNDINDNVPTFPRDYEGPFEVTEGQPGPRVWTFLAHDRDSGPNGQVEYSI--VDG 1776

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
              L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 1777 DPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 1835

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               PV      +V +SE + ++S VA I  S   SGC
Sbjct: 1836 DNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGC 1872



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 11/191 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
            +VV+   LDR+    G+++ +V+A +      S   +LT+ + D+ND  P   P +  + 
Sbjct: 936  VVVTTTELDRE--RIGEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVS 993

Query: 61   IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
            +     R  ++V +  TDND+G+NAE++Y I   +  G  KF +  R  V+ T   L   
Sbjct: 994  VSEDVPRDFRVVWLNCTDNDIGLNAELSYFITGGNVDG--KFSVGYRDAVVRTVVGLDRE 1051

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Y++ ++A D G  GK       V + V   N   P+F Q++Y+ +V E      ++
Sbjct: 1052 TTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPEDIPEGHSI 1111

Query: 175  ATITVSRLASG 185
              +T +    G
Sbjct: 1112 VQLTATDADEG 1122



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 18/158 (11%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRL--PMIPPIQI 61
            +LDR+  +   +    IA++  G  AS      V + + + D+ND  P    P       
Sbjct: 2452 SLDREKKD--HYILTAIAKDNPGDIASNRRENSVQVVIQVLDVNDCRPEFSKPQYSTSVY 2509

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
            +   A   ++ + ATD D G NAE+ YS+      G+  F +D  SG++ T   L + E+
Sbjct: 2510 ENEPAGTSVITMMATDQDEGSNAELAYSL---EGPGMEAFHVDKDSGLVTTQRPLRSYER 2566

Query: 122  YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
            +++TV ATD G      ++  +VEV  V   N   PVF
Sbjct: 2567 FNLTVVATDGGEPPLWGTTMLLVEVIDV---NDNRPVF 2601



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 19/172 (11%)

Query: 9   LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
           LDR+ P+P +    R  +++    G     A+   ++ VNL D+NDN P    +P +   
Sbjct: 830 LDRENPDPHEAELMRKIIVSVRDCGRPPLKATSSATVFVNLLDLNDNDPIFQNLPFVAEV 889

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
           ++   A   + ++ ATD D G+N  ++Y +      G+ +  F I+  SGV+ TT +L  
Sbjct: 890 LEGTPAGVSVYQVVATDLDEGLNGLVSYRM----QVGMPRLDFLINSTSGVVVTTTELDR 945

Query: 119 GE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
               +Y + V A+D G   KSS + + + V+   N  +P F    Y+V+VSE
Sbjct: 946 ERIGEYQLRVVASDAGTPTKSSTSTLTIRVL-DVNDETPTFFPAVYNVSVSE 996



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
           +F   VIAR+  G   +  V   +N+ D+NDN P            G  R       Q+V
Sbjct: 518 RFTLTVIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYMGALRENEPSVTQLV 571

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITV 126
           ++ ATD D   N  ITYSI   S+ G +    +    GVI     L    I      +TV
Sbjct: 572 RLRATDEDSPPNNLITYSIVFASSFGSYFDISVYEGYGVISVNHPLDYEQIPNGMIYLTV 631

Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            A D G     + V V++ V   N   P F +  Y V+V E     +TV  +  + L
Sbjct: 632 MAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYTVSVVESIMAGATVLFVNATDL 688



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAG-EARRQIVK 72
            +F   V+A +           L V + D+NDN P   + PP    + I+     R  + +
Sbjct: 2566 RFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVF-VRPPNGTILHIKEEIPLRSNVYE 2624

Query: 73   IEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + ATD D G+N  + YS      N     F IDP SG+I+T  +L    Q  YS+ + A+
Sbjct: 2625 VYATDQDEGLNGAVRYSFLKSTGNRDWEYFTIDPISGLIQTALRLDRETQAVYSLILVAS 2684

Query: 130  DTG 132
            D G
Sbjct: 2685 DLG 2687



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 17/179 (9%)

Query: 9    LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
            +DR+  +P      ++A +     GTA      L + + D NDN P   P    I + + 
Sbjct: 2017 IDREAFSPPILELLLLAEDIGLLNGTA-----DLFITILDDNDNWPTFNPDALTIHLLEN 2071

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                  I+++ ATD D G+N E+   IY +      +F I P +GVI      I  E+  
Sbjct: 2072 CPPGLSILQVTATDEDSGLNGEL---IYRIEAGAQDRFHIHPVTGVIRVGNVTIDREEQE 2128

Query: 122  -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             Y +TV ATD G    S T++   ++   N   P F      V+V E A   + +A +T
Sbjct: 2129 SYRLTVVATDRGTVPLSGTVIITILIDDVNDCRPEFINPIQTVSVLESAEPGTVIANVT 2187



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L V + D+NDN P +       +   E       +V++ ATD D+G+N+ ++Y I    N
Sbjct: 1503 LQVTILDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVRATDRDIGINSVLSYYITE-GN 1561

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYS-----ITVQATDTGGKSSQTIVEVSVVPGPNT 150
              +  FR+D  SG I T       E  S     +TV+   T   S+ T V V++V   N 
Sbjct: 1562 EDM-TFRMDRISGEITTRPAPPDREHQSFYHLVVTVEDEGTPTLSATTHVYVTIV-DEND 1619

Query: 151  RSPVFQQNTYDVNVSEG-ASINSTVATITVSRLASG 185
             +PVFQ+  Y++ + EG  +IN+++ T+    L  G
Sbjct: 1620 NAPVFQKPHYEILLDEGPETINASLITVQALDLDEG 1655



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 7/93 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
           ++ + ATDND G   E+ Y  Y   N    +F +D  +G+I    KL     +++++TV 
Sbjct: 469 VLTVLATDNDAGTFGEVNY--YFSDNA--DRFSLDKDTGLILLIAKLDYELIQRFTLTVI 524

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
           A D GG+ +   V ++V+   N   P FQ++ Y
Sbjct: 525 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 556



 Score = 40.4 bits (93), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 29/165 (17%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--------QAGEARRQIVKIEATDNDLGVNAEITYSI 90
            LTVN+ D+NDN P+     P  I        +       ++ + A D D G+N  ITY++
Sbjct: 2269 LTVNILDVNDNTPQF---KPFGITYYTEQVLEGATPGTTLIAVAAVDPDKGLNGLITYTL 2325

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG--KSSQTIV 140
                  G  +           + GK+IA            + TV+A+D G   ++++  V
Sbjct: 2326 LDQMPPGYVQLE-------DSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPV 2378

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + +V   N  +P+F Q +Y   + E   + + +  +T +   SG
Sbjct: 2379 YLEIV-DINDNNPIFDQPSYQEAIFEDVPVGTVILRVTATDADSG 2422



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 29/190 (15%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
           +V  ++ LDR+     +F  +    + QG        + + + D+NDNAP         R
Sbjct: 78  VVWLRQPLDRE--TVSEFIVEFSVSDHQGVITR---KVNIQVGDVNDNAPTFHNQPYSVR 132

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           +P   P+          I  + ATD DLG    + YS    S      F ID   G++  
Sbjct: 133 IPEDTPVGTP-------IFIVNATDPDLGAGGSVLYSFQPPS----EFFAIDSARGIVTV 181

Query: 113 TGKLI--AGEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
             +L     + Y +TV ATD    +   T+  ++ ++       P+F    Y  N+ E +
Sbjct: 182 IQELDYETTQSYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFVNLPYSTNIYEHS 241

Query: 169 SINSTVATIT 178
              +TV  IT
Sbjct: 242 PPGTTVRVIT 251


>gi|187957258|gb|AAI58115.1| Pcdh9 protein [Mus musculus]
          Length = 1203

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|149050078|gb|EDM02402.1| rCG37049, isoform CRA_b [Rattus norvegicus]
          Length = 1203

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
          Length = 3246

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    A S    L +N+ D+NDNAPR    +      +   A   IVK++A 
Sbjct: 592 YRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRFYTSLFQESIQENAPAGYSIVKVQAY 651

Query: 77  DNDLGVNAEITYSIYHVSNTGL----HKFRIDPRSGVIETTGKLIAGEQYSITVQ--ATD 130
           D D G NA+I Y+I    + G         +D  +G I TT +L   +Q     Q  ATD
Sbjct: 652 DADEGPNADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDREDQSKFMFQVIATD 711

Query: 131 TG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G      S+  I+ V  V   N   PVF+   Y+  VSE     + VAT+T +
Sbjct: 712 QGTPPQSASASVIITVQDV---NDNDPVFEPKIYESVVSEDDPPGTPVATVTAT 762



 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 19/180 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQ 60
           + +K  LDR+  +   FR  V A +      S    L +N+ D ND+AP   M       
Sbjct: 354 ITTKVKLDREMVDVHYFR--VTAMDDSFPPRSGTTMLQINVLDANDHAPTFEMNEYDASI 411

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-------HKFRIDPRSGVIETT 113
            ++      ++ ++ATD D+G NA++ YSI  ++  G+         F+IDP++GVI T 
Sbjct: 412 KESVSVGSTVITLKATDQDVGKNADVEYSIQSINGGGISSEEEDNKAFKIDPKTGVITTR 471

Query: 114 GKLI--AGEQYSITVQATD-----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L     E Y++ V ATD     T  KSS   V + ++   N   P F + TY V + E
Sbjct: 472 LMLDRETTEVYTLIVAATDLASPQTARKSSSASVVIHIL-DDNDNYPQFSERTYTVALDE 530



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 12/151 (7%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ VN+ D N+ AP     P      +       ++ + ATDND+G+NA+ITYS+     
Sbjct: 825 TVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVLVVSATDNDVGLNAQITYSL---GE 881

Query: 96  TGLH--KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
            G H  +F I+P++G I TT  L       Y +TV A D G    S  T VE+S+    N
Sbjct: 882 DGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTVTARDGGNPPLSDTTDVEISLT-DVN 940

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PVF+Q  Y  +V E A + ++V  ++ +
Sbjct: 941 DNYPVFKQAAYSGSVLEDALVGTSVVQVSAT 971



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPI 59
           ++  +KE LDR+  +  KF FQVIA ++     S   S+ + + D+NDN P   P I   
Sbjct: 688 WITTTKE-LDRE--DQSKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFEPKIYES 744

Query: 60  QIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRS--GVIETTGK 115
            +   +     +  + ATD D     E T   Y ++N     +F I  ++  GVI     
Sbjct: 745 VVSEDDPPGTPVATVTATDAD-----EDTRLHYELTNGNTRGRFAITSQNGRGVITVAQP 799

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
           L   ++  Y +TV A+D+GG++    V V++    N  +PVF+   Y  +V E A++ +T
Sbjct: 800 LDYKQEKRYILTVTASDSGGRTDTATVYVNITDA-NNFAPVFENAPYTASVFEDAAVGTT 858

Query: 174 VATITVS 180
           V  ++ +
Sbjct: 859 VLVVSAT 865



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQ 60
            +++   LDR+      +   V AR+      S    + ++L D+NDN P  +        
Sbjct: 898  IITTRTLDRE--TTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSV 955

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            ++       +V++ ATD D+G+N +I+YS+          F IDP SGVI T   L   +
Sbjct: 956  LEDALVGTSVVQVSATDADVGLNGKISYSLSEKDKED-GSFVIDPTSGVIRTNKGLDRES 1014

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +   A D G  +  + V V++ +   N   P F  +   + ++E + I STV  I
Sbjct: 1015 VAVYELEAYAIDRGSPTLSSSVPVTIHIDDINDSPPAFDSDKIVLYIAENSPIGSTVGEI 1074



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 83  NAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQ 137
           N+ I+YS+  + ++     F IDP++G I T  KL    +    + +T        +S  
Sbjct: 326 NSPISYSMSSLLDSRTQGMFEIDPKTGTITTKVKLDREMVDVHYFRVTAMDDSFPPRSGT 385

Query: 138 TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           T+++++V+   N  +P F+ N YD ++ E  S+ STV T+
Sbjct: 386 TMLQINVLDA-NDHAPTFEMNEYDASIKESVSVGSTVITL 424


>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
            [Nasonia vitripennis]
          Length = 4817

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPVS-LTVNLNDINDNAPRL------PMIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT     V+ L VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 3294 QGTPQLSSVTFLIVNVQDINDNPPEFTSKYYFARVPEIDAVGTE----VARVLATSKDTG 3349

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            VNA++ Y+I  V      KF ID +SGV+    +L     + Y +T+QA D G    ++ 
Sbjct: 3350 VNADVYYTI--VGGNEHKKFEIDTKSGVVSIAEQLDYERAKDYFLTIQAIDGGVPPLTNH 3407

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V+   N  +P+F Q +Y  ++ E A     V  +  + L S
Sbjct: 3408 ATVNITVLDS-NDNAPMFSQASYRASIREDAKAGEKVVQVFANDLDS 3453



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+  +  K+      +++  T+      L + ++D+NDNAPR  M       P  ++ 
Sbjct: 3173 LDRE--SQAKYILTAHVQDRDKTSWECSSQLEILISDLNDNAPRFSMQSYSATLPEDVEV 3230

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATD+D+G+N +I Y     +N     F I P SG++ T  K +  E   
Sbjct: 3231 GTL---VTKVHATDDDIGINRKIRYEFLDSAND---HFVISPDSGIV-TLAKPLDRETKA 3283

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++++QA D G     ++  + V V   N   P F    Y   V E  ++ + VA +  
Sbjct: 3284 MYNVSIQAMDQGTPQLSSVTFLIVNVQDINDNPPEFTSKYYFARVPEIDAVGTEVARVLA 3343

Query: 180  SRLASG 185
            +   +G
Sbjct: 3344 TSKDTG 3349



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 22/156 (14%)

Query: 39   LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT 96
            L V++ D+NDNAP+    +   ++        I+ +   TD DLG NA++ YS+  V++T
Sbjct: 887  LAVSVLDVNDNAPKFEKALASFRVSEAALNGTIIFRANTTDADLGENAQVAYSL--VTDT 944

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-------------SQTIVE 141
                FR+D  +GV+   GKL    Q  Y + ++ATD  G +             S+ +V 
Sbjct: 945  S--DFRVDRTTGVLTVFGKLDRERQSSYELRIRATDKNGGNDKGEPDFDNPALYSEALVR 1002

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            VS V   N  +P F   +Y V V E   + S +A I
Sbjct: 1003 VS-VDDVNDNAPKFALTSYTVKVREDVPVWSVIAVI 1037



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V+K++LDR+      F   V+A +  G +  V V   V + D NDN+P   +       
Sbjct: 2645 IVTKKSLDREKHK--LFEIPVMASDGGGKSGFVIVR--VKVTDENDNSPVFLLKEYKASI 2700

Query: 63   AGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVI--ETTGKLI 117
             G        +K++A D D G  A+I YSI+   N+ +   F I+P +G +  + + K  
Sbjct: 2701 YGNLTLNSAFLKVKALDADEGDAAKIIYSIFEPQNSEIKNIFGINPDTGAVFLKKSAKPW 2760

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
              + + + V+A D G  S    V V + + GP    P+F++      VSE ++I + +  
Sbjct: 2761 ETQPFQLFVRAQDKGLASHHVDVPVEIYIMGPEDIPPLFERKEDKFFVSETSTIGTPITR 2820

Query: 177  I 177
            +
Sbjct: 2821 L 2821



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 10/145 (6%)

Query: 41   VNLNDINDNAPRLPMIP-PIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYH-VSNTG 97
            V+++D+NDNAP+  +    ++++       ++  IEATD D G    I YS    + + G
Sbjct: 1003 VSVDDVNDNAPKFALTSYTVKVREDVPVWSVIAVIEATDPDEGPGGIIEYSFSEEMESEG 1062

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVP-GPNTRS 152
               F ID  SG I +  KL   E+  +++T+ A D G    SS+TI+ + VV    N  +
Sbjct: 1063 F--FGIDKLSGTIRSLQKLDFEERQVHTLTIVAKDKGEPSLSSETILIIEVVDVNENLHA 1120

Query: 153  PVFQQNTYDVNVSEGASINSTVATI 177
            PVF       +VSE   +N+ V  +
Sbjct: 1121 PVFNDFVISASVSENQPLNTLVTQV 1145



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 14/162 (8%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA     +++++ A DND G+N++I
Sbjct: 2354 GVYAEVLVSILVL--DVNDCPPEFSQ-DSYNISISEAALFGTELLRLVARDNDTGINSKI 2410

Query: 87   TYSIYH-----VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTI 139
             Y+I +     +    L  F +DP  G++     L     + +  TV A D G  S  + 
Sbjct: 2411 RYAIENRTADELGENTLDLFHVDPEEGIVYLKRSLDHETADSHHFTVVAMDRGVPSLSST 2470

Query: 140  VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V + V   N   P F+Q++Y+  +SE A     V  ++ S
Sbjct: 2471 AHVWLTVIDMNDNPPKFEQSSYNCFLSEEAERGQFVTVVSAS 2512



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGT------AASVPVSLTV-NLNDINDNAPRLPMIPPIQI 61
           L+R+  +      +  AR   G        A   V++T+ + ND+N      P+  P + 
Sbjct: 160 LNRERKDKYVLEIKATARRHDGKNRVTLLEAQTTVAVTILDTNDLN------PLFYPTEY 213

Query: 62  QAG-----EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           +A         + I+K+ A D DLG N EI YS    +     +F + P SGV+  T  L
Sbjct: 214 EATVTEDTPVHKSILKVSAEDADLGTNGEIYYSFAEKT----EQFAVHPVSGVVTLTRPL 269

Query: 117 IAGEQ--YSITVQATDTGG 133
              E+  Y +TVQA D G 
Sbjct: 270 RYVERPLYELTVQARDRGA 288



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            NLDR+  +   +   V+A        +    +T+ + D ND+AP+     P  I   E  
Sbjct: 2858 NLDREVKD--SYMIGVLAETDSSPPLTALAEITLQVLDENDHAPKFES-NPYSIAVAENI 2914

Query: 68   RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
             +   I+K+ A DNDLG N E+ YS         + F ID  +G I +  +L   +Q  Y
Sbjct: 2915 EEGTSILKVVAHDNDLGSNGEVRYSFGSDIGELANVFTIDAYTGWISSLVQLDKEQQPEY 2974

Query: 123  SITVQATDTG 132
               V ATD G
Sbjct: 2975 KFQVIATDNG 2984



 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIAGEQ--YS 123
            + +  + ATD D G    I YSI    N+   K  F ID  +G I T   L   +   + 
Sbjct: 2605 KLVTSVLATDKDFGEYGTIEYSI----NSDYLKEFFEIDRENGDIVTKKSLDREKHKLFE 2660

Query: 124  ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            I V A+D GGKS   IV V V    N  SPVF    Y  ++    ++NS    +
Sbjct: 2661 IPVMASDGGGKSGFVIVRVKVT-DENDNSPVFLLKEYKASIYGNLTLNSAFLKV 2713



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 17/152 (11%)

Query: 40   TVNLN--DINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYH 92
            TVN+   D NDNAP   M      +A      +A  ++V++ A D D   N +++YSI  
Sbjct: 3409 TVNITVLDSNDNAP---MFSQASYRASIREDAKAGEKVVQVFANDLDSNENGQVSYSIER 3465

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGP 148
                   +F ID +SG I     L   +   Y + V A D G    S+  IV + V+   
Sbjct: 3466 GDRQ--KQFTIDSQSGQITVLAPLDREQIASYVLEVHAKDNGIPTLSNYVIVNIEVIDA- 3522

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            N   P+F QN Y   V E   +   V   TV+
Sbjct: 3523 NDNPPLFAQNNYTTVVQEDKPLGYAVLKFTVT 3554



 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 9/141 (6%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSNT 96
            + V + DINDN P    +P   + + +A++   I+K+ A D D G N E+ Y +      
Sbjct: 2158 VNVTVLDINDNCPIFVNLPYYAVVSVDAQKGDVIMKVHAIDLDSGDNGEVRYELKKGHG- 2216

Query: 97   GLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PV 154
                F+++ ++G I     L     +Y + + A D  G  S   VE+SV      RS PV
Sbjct: 2217 --ELFKVNRKTGEISLKQNLEGHNREYQLMIAAYD--GGISPCSVEISVNVKVIDRSMPV 2272

Query: 155  FQQNTYDVNVSEGASINSTVA 175
            F +  Y  +V E   ++S +A
Sbjct: 2273 FDKQFYTDSVLESIEVHSPLA 2293



 Score = 42.7 bits (99), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)

Query: 19  FRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVK 72
           +   V AR++       P      LT+++  +N +AP + +  +P I   +      IV+
Sbjct: 277 YELTVQARDRGALYRMTPRASNARLTIHVRQVNLHAPEISVRHLPEILEHSNADTYAIVR 336

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG-------VIETTGKLIAGEQYSIT 125
           +   D D G + EI  S+  V+      FR+ P          V++   +  A + Y++T
Sbjct: 337 V--LDRDTGPHGEIA-SLEIVAGDPDGHFRVRPLPTPGEYSIQVLKLLDREAAPQGYNLT 393

Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
           ++A D G     +   V V +   N  +P+F    YDV V E A +NS V  + VS    
Sbjct: 394 LRAVDRGTPPRFSYKSVPVHLADLNDNAPIFSTEIYDVKVPETAPVNSPVIRLKVSDADQ 453

Query: 185 G 185
           G
Sbjct: 454 G 454



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 40/206 (19%)

Query: 11  RDPPNPGKFRFQVIA---REK--QGTAASVPV------------SLTVNLNDINDNAP-- 51
           R  P PG++  QV+    RE   QG   ++              S+ V+L D+NDNAP  
Sbjct: 365 RPLPTPGEYSIQVLKLLDREAAPQGYNLTLRAVDRGTPPRFSYKSVPVHLADLNDNAPIF 424

Query: 52  -------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
                  ++P   P+          +++++ +D D G NA +   I   +  G  +F I+
Sbjct: 425 STEIYDVKVPETAPVN-------SPVIRLKVSDADQGKNALVFLEIVGGNEGG--EFYIN 475

Query: 105 PRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
             +G++ T   L A  +  Y++TV A D G  G   Q+  +V + V   N   P F+++ 
Sbjct: 476 ADTGMLYTAVPLDAETKAFYTLTVSAVDQGNAGTRKQSSAKVKIYVIDTNDNDPEFEKSE 535

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
             V + E     ++V  +      SG
Sbjct: 536 MLVYLDENEPAGTSVCKVVARDKDSG 561



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + ++ A D DLG N ++ Y I    +  +  F IDP +G +   G+L     ++Y + + 
Sbjct: 815 LARLAARDRDLGYNGKLVYGISAGDSDSV--FGIDPDTGELRLIGRLDREREDEYFLNIT 872

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             D G   KS+  ++ VSV+   N  +P F++      VSE A++N T+
Sbjct: 873 VYDLGKPQKSASRMLAVSVL-DVNDNAPKFEKALASFRVSE-AALNGTI 919



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 101  FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
            F I+P +GVI T  +L   +   Y++++ AT   G S+Q  V V V+   N  +P F Q 
Sbjct: 1795 FFINPSTGVISTQERLDYEDVKFYNLSIAATSMSGASAQCNVIVHVL-DRNDNAPQFVQA 1853

Query: 159  TYDVNVSEGASINSTV 174
             Y   VSE ASI S V
Sbjct: 1854 VYTGQVSEAASIGSLV 1869



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L     +QY +TV+ATD+  G  ++ 
Sbjct: 2302 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 2359

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            +V + V+   N   P F Q++Y++++SE A
Sbjct: 2360 LVSILVL-DVNDCPPEFSQDSYNISISEAA 2388



 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 27   EKQGTAASVPVS-LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            + QGT A    + + V ++D ND+AP     +I     +       +V++ A D D G N
Sbjct: 1618 KDQGTPAKRNFARVLVTVHDHNDHAPTFISEIIQGKVFETSPIGTAVVQVIAIDRDRGEN 1677

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIVE 141
            A+++YS+    N G + F IDP  G I    +  L    +Y + V+ATD G  +    + 
Sbjct: 1678 AQLSYSMTS-GNVG-NVFSIDPDLGTIRVARELDLATASEYILLVKATDHGSPALSNSIP 1735

Query: 142  VSVV 145
            V V+
Sbjct: 1736 VHVM 1739



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGE-ARRQIVKIEATDNDLGVNAE 85
           GT       + + + D NDN P      M+  + +   E A   + K+ A D D G NA 
Sbjct: 508 GTRKQSSAKVKIYVIDTNDNDPEFEKSEML--VYLDENEPAGTSVCKVVARDKDSGENAY 565

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
           I+YSI ++       F ID  SGV++T   L       +Y + V+A D G
Sbjct: 566 ISYSIDNIKRV---PFEIDHFSGVVKTKQLLDYETMKREYLLHVRANDWG 612



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 8/142 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            V + D+NDN P        ++  +       ++ + ATD D   NA++ + +    N   
Sbjct: 3099 VQVLDVNDNPPYCLKYRYREVLSEGSHPGSYVLTVLATDYDDEPNAKLRFYLTGGKN--- 3155

Query: 99   HKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
             KF +D  +GV++T G+L    Q  Y +T    D    S +   ++ + +   N  +P F
Sbjct: 3156 EKFSLDKETGVLKTVGQLDRESQAKYILTAHVQDRDKTSWECSSQLEILISDLNDNAPRF 3215

Query: 156  QQNTYDVNVSEGASINSTVATI 177
               +Y   + E   + + V  +
Sbjct: 3216 SMQSYSATLPEDVEVGTLVTKV 3237



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 28/178 (15%)

Query: 18   KFRFQV----IAREKQGTAASVPVSLTVNLNDINDNAPRLP--------MIPPIQIQAGE 65
            +F+F V    + + K  + ++  V +TV+  D+ND  P+          ++P  +  A  
Sbjct: 1929 EFQFNVKVSDLGKPKLSSESTAKVIITVS--DVNDCPPKFQQSDYNATVLLPTWKNVA-- 1984

Query: 66   ARRQIVKIEATDND----LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
                +VK+EA D D          + Y I    N G   F ID +SG +         + 
Sbjct: 1985 ----VVKLEAHDPDSTSAFTNQPSLRYDIID-GNQG-QSFDIDSQSGALTVNNPENMKKS 2038

Query: 122  YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            Y + V+A+D G  SS   V + V    N+   VFQ+  Y+  V E ++  STVA + V
Sbjct: 2039 YLLHVRASD-GKYSSVAQVNIKVAKSENS-GLVFQKEVYEGTVVENSTKVSTVAVLNV 2094



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ 127
            + + ++ A D D+G N +I YSI      G  K    P +G++ +     AG+++ + ++
Sbjct: 1350 KPLFQVLAHDQDIGKNGKIQYSIKSGKGKGKFKIH--PDTGMVYSQRGFEAGQEFEMIIR 1407

Query: 128  ATDTGG--KSSQTIVEVSVVPGPNT--RSPVFQQNTYDVNVSEGASINSTVATI 177
            ATD G   +S Q  + V VV  P      PVF+     V V+E       VA +
Sbjct: 1408 ATDEGEPPRSHQARISVQVVETPKDSPNPPVFKSLNQSVEVTESDKAGFLVALM 1461


>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
          Length = 5008

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 18/183 (9%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAG 64
           LDR+      F  QV+A +      S    + V+L D+NDN+   P+  P+Q    IQ  
Sbjct: 686 LDRE--EQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNS---PVFYPVQYFAHIQEN 740

Query: 65  E-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
           E A   +  + ATD D+G N  + YSI   S     +F++  ++G+I T   L   E+  
Sbjct: 741 EPAGTYVTTVSATDPDMGPNGTVKYSI---SAGDTSRFQVHSKTGIITTKIALDREERTA 797

Query: 122 YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           Y + V ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V T+  
Sbjct: 798 YQLQVVATDGGHLQSQNQAIVTITVLDTQD-NPPVFNQGMYGFVVFENVALGYHVGTVFA 856

Query: 180 SRL 182
           S +
Sbjct: 857 STM 859



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 12/149 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDN-DLGVNAEITYSIYHV 93
            ++T+N+ D NDNAP L + P       +  R    ++K+ A D+ D G+N+E+ Y +   
Sbjct: 2992 TVTINIVDSNDNAP-LFLAPKYFTPVTKNVRTGTNLIKVTAVDDKDFGLNSEVEYFLSDE 3050

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
            S T  +KFR+D  +G I  +  L+A   +++   V+A D G    SS+  VE+ VV   N
Sbjct: 3051 SKT--NKFRLDRSTGWISVSSSLMADLNKKFLFKVKAKDKGNPPLSSEVAVEI-VVTEEN 3107

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +P F Q+   V + E  S+ + + T++
Sbjct: 3108 YHTPEFSQSHMTVTIPESHSVGAVIRTVS 3136



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+   P+     
Sbjct: 1835 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHIPKFSKPVYSFDI 1889

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
             +       +  I ATD+D G+N EITY++      G+  F ++P +GV   T  L   A
Sbjct: 1890 PEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGM--FFLNPVTGVFNLTRALDYEA 1947

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y +T++A D GG+ +   V  +++   N   PVF   +Y  ++ E  +  S +   +
Sbjct: 1948 QQYYILTIRAEDGGGQFTTIRVYFNIL-DINDNPPVFSMTSYSTSLMENLAPGSAILNFS 2006

Query: 179  VSRLASG 185
            V+    G
Sbjct: 2007 VTDADDG 2013



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 10/174 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRL--PMIPPIQIQAGEARRQIVKIE 74
            F   VIA + QG    +    TV   + DINDNAP+    +      +      Q++++ 
Sbjct: 1214 FSLTVIATD-QGLPKPLKDQATVQIYMKDINDNAPKFLKDLYQATVSELAANLTQVLRVS 1272

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG 132
            A+D D G N  I YS+  +      +F ID  +G +   GKL   A   YS+ +QA D+G
Sbjct: 1273 ASDVDEGTNGLIHYSV--IKGNEEKQFAIDSSTGQVTLVGKLDHEATASYSLVIQAVDSG 1330

Query: 133  GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                 +   +S+ V   N  SP F ++   V+V E   +   V+++T +   SG
Sbjct: 1331 AVPLSSTCTLSIDVLDENDNSPSFPKSILSVDVLENMRVGELVSSVTATDSDSG 1384



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L V + D+NDNAP     P I +I    + R+++ + A 
Sbjct: 2658 KYVIWIEARDTGFPPFSSYKKLEVTVVDVNDNAPEFEQDPFIAEIVENLSPRKLLTVAAV 2717

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G+N ++ Y I  +     + F I+  +G I +   L   +  QY++T++A+D G  
Sbjct: 2718 DRDSGLNGQLIYEI--IEGNTENSFNINRATGEIRSIRPLDREKLSQYTLTIKASDKGTP 2775

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               T V+V + V   N  +P F Q  +  +V E A +  TV  +T S
Sbjct: 2776 LQSTTVKVIINVLDENDNAPRFSQ-IFSASVPENAPLGFTVTRVTTS 2821



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1767 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGADDS 1825

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
             H   +DP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N   P F
Sbjct: 1826 FH---VDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHIPKF 1880

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E A+  S VA I  +   SG
Sbjct: 1881 SKPVYSFDIPEDATPGSLVAAILATDDDSG 1910



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 10/150 (6%)

Query: 37   VSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
             S+T+N+ D+NDN+P        P + ++   +   ++++ A+D D G NA I Y+I   
Sbjct: 3202 CSVTINVIDVNDNSPAFSPEDYFPKV-LENAPSGTTVIRLNASDADSGPNAVIAYAI-QS 3259

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            S++ L  F IDP +G I T G L     + Y +T++A +   +   +   V++ + G N 
Sbjct: 3260 SDSDL--FVIDPNTGTITTQGFLDYETKQSYHLTIKAFNVPDEERCSFASVNIQLEGTNE 3317

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVS 180
              P F    Y   VSE AS  + V  +  S
Sbjct: 3318 YVPRFVSKLYYFEVSEAASEGTIVGEVFAS 3347



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIE 74
            ++ +V+A    G A +    + + + D+NDN+P    I  ++    ++  +A   I + +
Sbjct: 901  YQLKVVA---SGGAVTGDTIVNITVKDLNDNSPHF--IHAVESVNVVENWKAGHTIFQAK 955

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG- 132
            A D D GVN  + YS+   +  GL  F I+ ++G I   G+L I    Y + + A+D G 
Sbjct: 956  ALDPDEGVNGMVLYSLKQ-NPKGL--FSINEQTGAISLIGQLDINAGTYQVEILASDMGV 1012

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             + S T +    V   N   PVF Q +Y++ + E   +NS    +  S   SG
Sbjct: 1013 PQLSSTFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDKDSG 1065



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 31/200 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
           +VS+  LDR+     +   QV  + +      + V++TV   DINDN P         R+
Sbjct: 192 LVSQGGLDREATPSYQLLVQVEDKGEPRRRGYLQVNVTVQ--DINDNPPVFSQTLYQARV 249

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSG 108
           P   P+          ++++ A D D G NA+I Y +      G        F +DP SG
Sbjct: 250 PEDAPVGAS-------VLQVAAADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESG 302

Query: 109 VIETTGKLI--AGEQYSITVQATDTG-----GKSSQTIVEVSVVPG-PNTRSPVFQQNTY 160
           VI     L     +QYS+TVQATD G     G++   I  + V    P  +   F   + 
Sbjct: 303 VIRIREHLDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSR 362

Query: 161 DVNVSEGASINSTVATITVS 180
             +V E A+  + VA +TVS
Sbjct: 363 FASVDENAAPGTVVALLTVS 382



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            S+ + L   N+  PR    +   ++    +   IV ++ A+D DLG + E+ Y I+   N
Sbjct: 3307 SVNIQLEGTNEYVPRFVSKLYYFEVSEAASEGTIVGEVFASDRDLGTDGEVHYLIF--GN 3364

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+ID RSG I  +G L     E+ S+ V A ++G      I EV+V   V   N 
Sbjct: 3365 SRKKGFQIDGRSGQIYVSGPLDREKEERISLRVLAKNSGSIRGADIDEVTVNITVLDAND 3424

Query: 151  RSPVFQQNTYDVNVSEG 167
              PVF   TY++ +SEG
Sbjct: 3425 -PPVFTLGTYNIQISEG 3440



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 6/167 (3%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
            N G ++ +++A +      S    LTV+++D+NDN P    +   I I   E    +  K
Sbjct: 997  NAGTYQVEILASDMGVPQLSSTFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK 1056

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDT 131
            ++A+D D GVN EI YSI    N G   F I P   + I++       E+Y + V A+D 
Sbjct: 1057 VQASDKDSGVNGEIAYSIIE-GNAG-DAFGIFPDGQLYIKSELDRELQERYVLLVVASDR 1114

Query: 132  GGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              +     V ++V+    N   P+F    Y     E  S  S V  I
Sbjct: 1115 AVEPLNATVNITVILEDVNDNRPLFNSTNYVFYFEEEQSGGSYVGKI 1161



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 24/195 (12%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI----QI 61
            K  LDR+     ++   V+A ++     +  V++TV L D+NDN P       +    + 
Sbjct: 1094 KSELDRELQE--RYVLLVVASDRAVEPLNATVNITVILEDVNDNRPLFNSTNYVFYFEEE 1151

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---- 117
            Q+G +   + KI A D D G N E+ YS  H+       F ++  +G I +T +      
Sbjct: 1152 QSGGS--YVGKINAVDKDFGPNGEVRYSFEHMQ----PDFELNTITGEIRSTHQFDREAL 1205

Query: 118  ----AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
                    +S+TV ATD G       Q  V++  +   N  +P F ++ Y   VSE A+ 
Sbjct: 1206 MRQRGAAVFSLTVIATDQGLPKPLKDQATVQI-YMKDINDNAPKFLKDLYQATVSELAAN 1264

Query: 171  NSTVATITVSRLASG 185
             + V  ++ S +  G
Sbjct: 1265 LTQVLRVSASDVDEG 1279



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEAT 76
            ++  + A+++     S  +S+ + + D NDN P  P   I    I+       ++ + A 
Sbjct: 1425 YKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIPVGSSVISVTAN 1484

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            D+D  +N ++TY+I   +  G H FRID   G I T  ++       + +TV+ATD
Sbjct: 1485 DSDADINGQLTYAIIQQTPRGNH-FRIDEVRGTIFTNAEIDREFANLFELTVKATD 1539



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 15/177 (8%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + A +K     S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2755 LDRE--KLSQYTLTIKASDKGTPLQSTTVKVIINVLDENDNAPRFSQIFSASVPENAPLG 2812

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
              + ++  +D D+G+NA    S Y + +T L  F I+P +G I T  +L+  E   +Y I
Sbjct: 2813 FTVTRVTTSDEDIGMNA---ISRYSIRDTSL-PFIINPSTGDI-TVSRLLNREDTDRYRI 2867

Query: 125  TVQATDTGGK-SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             V A D+G   S+   V V+ V   N  +P F + +Y +   E   I   V  ++ +
Sbjct: 2868 RVSAHDSGWTVSTDVTVFVTDV---NDNAPRFTKPSYYLECPELPGIGLKVTQVSAT 2921



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 11/156 (7%)

Query: 32   AASVPVS----LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAE 85
            + +VP+S    L++++ D NDN+P  P  I  + +       ++V  + ATD+D G NA+
Sbjct: 1329 SGAVPLSSTCTLSIDVLDENDNSPSFPKSILSVDVLENMRVGELVSSVTATDSDSGDNAD 1388

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG-KSSQTIVEV 142
            + YSI   +N G   F I P +G I    KL    Q  Y + + A D G    S T+  V
Sbjct: 1389 LHYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVV 1446

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              V   N   P F       ++ E   + S+V ++T
Sbjct: 1447 IYVRDFNDNPPNFPAGDIFKSIIENIPVGSSVISVT 1482



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 21/139 (15%)

Query: 39   LTVNLNDINDN-----APRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +++ L D+ND+     +P+L  IP   PI          + K +ATD D G N+ I YS+
Sbjct: 2076 VSIILLDVNDSPPSFISPKLTYIPENTPIDTV-------VFKAQATDPDSGPNSYIEYSL 2128

Query: 91   YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
                    +KF I    G +   G+L   A   Y++TV ATD G  S  +  +V V V  
Sbjct: 2129 LRPLG---NKFSIGTIDGEVRLIGELDREAVSNYTLTVVATDKGQPSLSSSTDVIVIVLD 2185

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P+F Q  Y V + E
Sbjct: 2186 INDNNPIFAQKLYRVELEE 2204



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 15/161 (9%)

Query: 32   AASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEI 86
            A S   S+ V + D+NDN P+    P     P    +G     +  +  TD D G NAE+
Sbjct: 2469 ALSSSTSVLVAVADVNDNPPKFQHHPYVTHVPSPTTSGSF---VFAVTVTDADTGSNAEL 2525

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSV 144
             YS+         KF ID   G I    +L    + +I+V   D G   K+  T V V  
Sbjct: 2526 HYSLV---GKNAEKFHIDSARGAILAANELAGESEVTISVHVRDGGRYPKTDSTTVTVRF 2582

Query: 145  VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V       P  Q         E  ++ + V TI+ S    G
Sbjct: 2583 V--SRAEFPQVQAEQETFTFPENQAVGTLVTTISGSSARGG 2621



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 16/146 (10%)

Query: 39   LTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
            +T+ + D NDN P       L   P + I +      +  I A D D G N E+ Y I  
Sbjct: 1554 VTILVMDQNDNVPVFISQNALAADPSVMIGS-----VLTTIIAADPDEGANGEVEYEII- 1607

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
              N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++      
Sbjct: 1608 --NGDTKTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTEMTIIL-QGVD 1664

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
             P+F Q  Y   + EG  I + V +I
Sbjct: 1665 GPIFTQPKYITILKEGEPIGTNVISI 1690



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 17/167 (10%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD D G N  + +S 
Sbjct: 106 TYPSEVRVLVLDLNDNAPVFPD-PSIVVTFKEDTGSGRQLILDTATDADSGTNG-VDHSS 163

Query: 91  YH-VSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKSSQTI 139
           Y  VS     +FR++     SG      + + G L   A   Y + VQ  D G    +  
Sbjct: 164 YRIVSGNEEGRFRLNITLNPSGEGAFLHLVSQGGLDREATPSYQLLVQVEDKGEPRRRGY 223

Query: 140 VEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ++V+V V   N   PVF Q  Y   V E A + ++V  +  +    G
Sbjct: 224 LQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVLQVAAADADEG 270



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSN 95
           SL + +NDIND+ P     +  + I         V+ + ATD D G+NA + YSI  VS 
Sbjct: 474 SLVIFVNDINDHPPVFEQSVYRVNISEEVPLGSYVRGLSATDRDSGLNANLKYSI--VSG 531

Query: 96  TGLHKFRIDPRSGVI 110
             L  F I   SG++
Sbjct: 532 NELGWFHISEHSGLV 546


>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
 gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
          Length = 3596

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    + S    L VN+ D NDNAPR          ++       I++++A 
Sbjct: 657 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 716

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
           D+D G NAEI+YSI    +       +DPR+G ++T   L   EQ  ++  V A D G  
Sbjct: 717 DSDEGANAEISYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQNRFAFQVVAKDGGVP 774

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
               SS  ++ V  V   N   P F    Y+ NV E     + V T+T +
Sbjct: 775 PKSASSSVVITVQDV---NDNDPTFNPKYYEANVGEDQPPGTPVTTVTAT 821



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 23/183 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V +  +LDR+  +   FR  V+A +      S   +L VN+ D ND++P        Q 
Sbjct: 419 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 473

Query: 62  QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG-------LHKFRIDPRSGV 109
           +A           ++ + ATD D+G NAEI Y I  +++         +  FRID RSGV
Sbjct: 474 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAITDGAGVVQDQEMPIFRIDSRSGV 533

Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ----TIVEVSVVPGPNTRSPVFQQNTYDVN 163
           I T   L     + Y + V A+D     S+    T   V  +   N   P F + TY V 
Sbjct: 534 ISTRSSLDRETSDSYHMLVTASDMAAAQSERKTATASVVVKILDDNDNYPQFSERTYTVQ 593

Query: 164 VSE 166
           V E
Sbjct: 594 VPE 596



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+  N  +F FQV+A++      S   S+ + + D+NDN    P   P   +A     
Sbjct: 754 LDREEQN--RFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PTFNPKYYEANVGED 808

Query: 69  Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
           Q     +  + ATD D   ++ + Y I   +  G  +F I  ++G     I         
Sbjct: 809 QPPGTPVTTVTATDPD--EDSRLHYEISTGNTRG--RFAITSQNGRGLITIAQPLDYKQE 864

Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
           +++ +TV ATD+GG+S  + V +++    N  +P+F+   Y  +V E A I +TV  ++ 
Sbjct: 865 KRFLLTVTATDSGGRSDTSTVHINITDA-NNYAPIFENAPYSASVFEDAPIGTTVLVVSA 923

Query: 180 S 180
           +
Sbjct: 924 T 924



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
            +F   V A +  G + +  V   +N+ D N+ AP     P      +       ++ + A
Sbjct: 866  RFLLTVTATDSGGRSDTSTVH--INITDANNYAPIFENAPYSASVFEDAPIGTTVLVVSA 923

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            TD+D+G+NA+ITYS+   S  GL     F I+ ++G I T+  L       Y +TV A D
Sbjct: 924  TDSDVGINAQITYSLNEESINGLSSPDPFTINQQTGAIITSAPLDRETTSGYLLTVTAKD 983

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             G    S  T VE+SV    N  +P F+   Y  ++ E A + ++V  ++ +
Sbjct: 984  GGNPSLSDTTDVEISVT-DVNDNAPAFKNPLYQSSILEDALVGTSVIQVSAT 1034



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            +++   LDR+      +   V A++    + S    + +++ D+NDNAP    P+     
Sbjct: 961  IITSAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSI 1018

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            ++       ++++ ATD D+G+N  I Y +          F IDP SG I T   L    
Sbjct: 1019 LEDALVGTSVIQVSATDPDIGLNGRIKYLLSDRDQED-GSFVIDPTSGTIRTNKGLDRES 1077

Query: 121  Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +T  A D G     + VEV + +   N   P F  +   + V E + + S V  I
Sbjct: 1078 VAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEI 1137



 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
           F++D R+GV+ T+  L   +    Y   V ATD     +S  T ++V+V+   N  SP F
Sbjct: 411 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 468

Query: 156 QQNTYDVNVSEGASINSTVATI 177
           +   ++ ++ EGA++ STV T+
Sbjct: 469 EAEQFEASIREGATVGSTVITL 490



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 19/177 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
           ++ ++ +LDR+  +   +   V A +    Q    +   S+ V + D NDN P+      
Sbjct: 533 VISTRSSLDRETSD--SYHMLVTASDMAAAQSERKTATASVVVKILDDNDNYPQFSERTY 590

Query: 55  --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              +P  + Q G+    +  I ATD D G NA I Y+I  +      +F ID  SG +  
Sbjct: 591 TVQVP--EDQWGDDN-NVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 645

Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              L   +   Y + ++A D G  S     ++ V V   N  +P F  + +  +V E
Sbjct: 646 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 702


>gi|326671182|ref|XP_001345220.3| PREDICTED: protocadherin-1 [Danio rerio]
          Length = 1190

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI----QAGEARRQIVKI 73
           +R +++A +    A S   SL V + D NDN+P   P +  ++     Q GE   ++V++
Sbjct: 435 YRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGE---KVVEV 491

Query: 74  EATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            A+D D G NAE+ YSI   S+T GL  F IDP SG +     L     ++Y   V A D
Sbjct: 492 VASDADSGTNAELVYSIIADSSTRGL--FEIDPNSGEVRARSPLDREHKDRYEFRVTAAD 549

Query: 131 TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S +    V + V   N   P F  + Y  +V E     S V  +TV  +  G
Sbjct: 550 KGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEG 605



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 27/167 (16%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITYSI 90
           L V + D NDNAP+       +  + EA           +++++A D+DLG N EI Y++
Sbjct: 229 LRVVIADANDNAPKF------EKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTL 282

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVP 146
           +   +      RID  SG+I   G L   E       V A D G   KSS+T V + V  
Sbjct: 283 HQAIDPVPKLLRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVT- 341

Query: 147 GPNTRSPVFQ--------QNTYDVNVSEGASINSTVATITVSRLASG 185
             N  +P  +         +    N+SE   + + VA + VS    G
Sbjct: 342 DQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEG 388



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 26/156 (16%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP----------- 51
           ++S  + DR+  +   FR + +  +      S  V +T+N+ D NDNAP           
Sbjct: 630 ILSSISFDREKESSYTFRLKAV--DGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFI 687

Query: 52  RL-PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
           RL PM  P  +        +  +EA D D G NAE+ YSI   +   L  F I P +G I
Sbjct: 688 RLSPMAAPDSV--------VEVVEAEDIDSGSNAELVYSIAGGNPHDL--FYISPSNGEI 737

Query: 111 ETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
             T +L       + + ++ +D G  S   I  V +
Sbjct: 738 TLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHI 773



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 29/206 (14%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
           ++  K  LDR+  N    +F V+AR+K  +  S    +++++ D NDNAP + +  I  +
Sbjct: 301 IIYVKGPLDREEIN--NLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLV 358

Query: 60  QIQAGEAR--------RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP------ 105
               G A           +  ++ +D D G NA +T  +      G   F++ P      
Sbjct: 359 THSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVV-----AGDVPFQLRPASDSSV 413

Query: 106 ---RSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
              R   ++TT  L       Y + + A D+G  +  +   + V V   N  SP+F    
Sbjct: 414 DNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTL 473

Query: 160 YDVNVSEGASINSTVATITVSRLASG 185
           ++V  +E       V  +  S   SG
Sbjct: 474 FEVEFAEENQPGEKVVEVVASDADSG 499


>gi|118084781|ref|XP_001231264.1| PREDICTED: protocadherin-9 isoform 1 [Gallus gallus]
          Length = 1237

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P      
Sbjct: 626 VIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNTSFK 685

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P+    G     + ++ A D D G+NAE+ Y+I + +N GL  FRIDP +G I    K
Sbjct: 686 LVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVNGNNKGL--FRIDPVTGNITLEEK 740

Query: 116 LIAGE--QYSITVQATDTG-GKSSQTIVEV 142
               +   + + V  +D G  KS  T+V V
Sbjct: 741 PTPNDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKESQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRFFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|443683183|gb|ELT87522.1| hypothetical protein CAPTEDRAFT_92665, partial [Capitella teleta]
          Length = 803

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 12/191 (6%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           Y V++   LDR+     ++   V+ R+K     +  V + VN+ DIND+AP    P    
Sbjct: 346 YQVLTAAVLDRE--KQSRYNLAVLCRDKGKEPQTSVVHIPVNVTDINDHAPVFSQPSYSA 403

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEI-TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             I+       +++I ATD DLG NA+I TYSI   S+T  + F ID  +G I  T  L 
Sbjct: 404 EIIERNYIGAVVLRINATDKDLGDNAKIFTYSIL-PSHTSTNTFTIDRHTGRITNTKILD 462

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQ---QNTYDVNVSEGASIN 171
              Q  Y + V A+D G     +   VS+ V   N   PVF+   QN   +++S  AS  
Sbjct: 463 REAQSVYYLLVSASDRGIPPLSSTASVSIFVADRNDNPPVFEYPKQNNNTLHISNQASKG 522

Query: 172 STVATITVSRL 182
             V  I    L
Sbjct: 523 YLVTRIKAFDL 533



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 28/196 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V+ K  LDR+      +  +++A +    A S  + + V + D NDN+P     P  ++ 
Sbjct: 130 VILKRPLDREEQE--SYELEIVATDGGIPAKSGTLLVHVRVLDTNDNSPEFEK-PVYEVF 186

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIETTGKL 116
             E       +V+++A D D G+N ++ YS+   S+T L     F +D  +G I   G +
Sbjct: 187 IDENVPRMTTVVRVKAEDRDHGLNGKVIYSL--SSHTQLKHGDVFGMDEETGEIYVQG-V 243

Query: 117 IAGEQ---YSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYD------VN 163
           I  E    Y++ V A D G  +    +  +V V  V   N  +P    NT          
Sbjct: 244 IDYETTPVYNLAVVALDQGADAIPGDAAVVVHVRDV---NDHAPEIAVNTLSSPQPGVAV 300

Query: 164 VSEGASINSTVATITV 179
           V E A++ + VA ITV
Sbjct: 301 VLEDATLGTFVAHITV 316



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 24/193 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQV-IAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
           ++ S++ LDRD   PG    +V I    Q       V +TV + D+NDN P  P   +  
Sbjct: 15  VIRSRQKLDRDVMCPGWEVCEVRIDVAIQPVEHMQIVKITVEILDVNDNFPVFPDAEVFH 74

Query: 58  PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI---DPRSGVIETTG 114
            ++  A   R   V   A+D D   N+   Y +      G  +F +   +   G ++   
Sbjct: 75  EMRESAMVGRSSFVAPAASDPDSPRNSIQEYQLI----GGDEQFELQVQEKFDGSVQL-- 128

Query: 115 KLIAG--------EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
           K+I          E Y + + ATD G   KS   +V V V+   N  SP F++  Y+V +
Sbjct: 129 KVILKRPLDREEQESYELEIVATDGGIPAKSGTLLVHVRVL-DTNDNSPEFEKPVYEVFI 187

Query: 165 SEGASINSTVATI 177
            E     +TV  +
Sbjct: 188 DENVPRMTTVVRV 200



 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 24/175 (13%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQ--I 70
           +   V+A ++   A     ++ V++ D+ND+AP + +       P + +   +A     +
Sbjct: 252 YNLAVVALDQGADAIPGDAAVVVHVRDVNDHAPEIAVNTLSSPQPGVAVVLEDATLGTFV 311

Query: 71  VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ---YS 123
             I   D D  +NA    S++       H F +    D    V+  T  ++  E+   Y+
Sbjct: 312 AHITVQDKDTAMNAMFNCSLHD------HHFELKNLYDGEYQVL--TAAVLDREKQSRYN 363

Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + V   D G +   ++V + V V   N  +PVF Q +Y   + E   I + V  I
Sbjct: 364 LAVLCRDKGKEPQTSVVHIPVNVTDINDHAPVFSQPSYSAEIIERNYIGAVVLRI 418


>gi|354474312|ref|XP_003499375.1| PREDICTED: protocadherin-9-like isoform 3 [Cricetulus griseus]
          Length = 1161

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDLNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|300794431|ref|NP_001178617.1| protocadherin-9 precursor [Rattus norvegicus]
          Length = 1237

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
          Length = 3278

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 403 YLVCVARRLDREERD--VYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 460

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 461 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGTHT--HWFSIDPTSGIITTA 514

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 515 ATLDYELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 574

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 575 GTCFLQVTATDADSG 589



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ D+ND AP  P      I  +       ++ ++ATD DLG N ++TY    VS  
Sbjct: 1615 LTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYG--GVSG- 1671

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F +DP SGV+ T   L   EQ  I  TV A D G     T + V V V   N  SP
Sbjct: 1672 --ESFSLDPNSGVLTTLRALDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSP 1729

Query: 154  VFQQNTYDVNVSEG 167
             F      + V EG
Sbjct: 1730 TFGNTHLSLEVPEG 1743



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDN P     +   + ++       I+ +
Sbjct: 2324 HYHLQLLAHDGPHEGHA-----NLTVLVEDVNDNVPIFSQSLYQVMMLEHTPPGSAILSV 2378

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++     F +D  +G + TT G +  G +      + ++A
Sbjct: 2379 SATDRDSGANGHIS---YHLASPA-EGFSVDTNNGTLFTTVGAMALGHEGPGVVDVVLEA 2434

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+S+Q  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2435 RDHGAPGRSAQATVHVQLK-DQNDHAPSFTLPHYRVAVSEDLPPGSTLLTL 2484



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 22/197 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            V S E LD +  NP   R +++ + + G A +  V LT+ L D NDNAPR   P      
Sbjct: 2106 VQSAEGLDFET-NP---RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLQPHYVAFL 2160

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---I 117
             ++      ++++EA D D G   +I+YS+   S      F +DP +G I TT  L   I
Sbjct: 2161 PESRPLEGPLLQVEADDLDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREI 2219

Query: 118  AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              E   + + ATD G     G ++ T++ +      N   P   Q  +++ VSE A + S
Sbjct: 2220 WAET-RLVLMATDRGSPALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGS 2273

Query: 173  TVATITVSRLASGCAIM 189
             +A +T + + SG  + 
Sbjct: 2274 EIAQVTGNDVDSGPVLW 2290



 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E       +++++A
Sbjct: 1801 FQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPSYSVEVPEDAPVGTLLLQLQA 1859

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D G N  +   +Y++       F ++P SG + T   L     A   +S+T      
Sbjct: 1860 HDPDEGDNGRV---MYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAA 1916

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE-GASINSTVATITVSR 181
             G  S T+     V   N  +P F  +   + +   G S+N     +   R
Sbjct: 1917 AGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLR 1967



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LV++ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 188 LVIAGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 244

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G ++    L
Sbjct: 245 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGFLKLERPL 301

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 302 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 361

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 362 PGQLVARISVS 372



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +QI
Sbjct: 87  VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQI 133

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRID--PRSGVIETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++  P  G       +I
Sbjct: 134 PEHTALGTRYPLEPAHDADAG---RLGTQGYALSGDGAGETFRLETRPGPGGAPVPELVI 190

Query: 118 AGE-------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           AGE        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 191 AGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 249

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 250 APGSPVLQVFASDADAGA 267



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 47   NDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND++PRL   P     A        + ++ ATD D G N  +TYS+  +S      FRI 
Sbjct: 1080 NDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDKDSGPNGRLTYSLQQLSEDS-KAFRIH 1138

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
            P++G + T   L   +Q  + + VQ  D G   +S+   V V+V+   N  SP F Q
Sbjct: 1139 PQTGEVTTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVL-DLNDNSPTFLQ 1194



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 24/187 (12%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIV 71
             PG     + AR+      S   ++ V L D ND+AP    +P  ++   E       ++
Sbjct: 2424 GPGVVDVVLEARDHGAPGRSAQATVHVQLKDQNDHAPSF-TLPHYRVAVSEDLPPGSTLL 2482

Query: 72   KIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGE-- 120
             +EA D D    +A + YSI  +S      F+++PR   +        +  G L+  E  
Sbjct: 2483 TLEAIDADGSRSHATVDYSI--ISGNRGRVFQLEPRLAEVGDGVGPGPQALGCLVLLEPL 2540

Query: 121  ------QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  QY++TV A D G     + V V+V V   N   PVF + +Y V V E   + + 
Sbjct: 2541 DFESLTQYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAE 2600

Query: 174  VATITVS 180
            +  +  S
Sbjct: 2601 LLHVEAS 2607



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 8/159 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDND 79
              V AR++        +++ V + D ND++P        +++  G+  + +  + A+D D
Sbjct: 1699 LTVYARDRGLPPLLTHITVRVTVEDENDHSPTFGNTHLSLEVPEGQDPQTLTTLRASDPD 1758

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKS 135
             G+N ++ Y I     +G   F +D  SG   TT  L       + + ++A D G    S
Sbjct: 1759 GGLNGQLQYRILGGDPSG--AFALDLTSGEFGTTRPLDREVEPAFQLQIEARDGGQPALS 1816

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +V V+V+   N  +P F   +Y V V E A + + +
Sbjct: 1817 ATLLVTVTVLDA-NDHAPAFPVPSYSVEVPEDAPVGTLL 1854



 Score = 39.3 bits (90), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++P    Q       +  + A D D G N+ +T+S+    
Sbjct: 863  VLLDDVNDNSPAFPAPEDTVLLP----QNTAPGTPVYTLRALDPDSGANSRVTFSLL-AG 917

Query: 95   NTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              GL  F +DP +G +          G  + + V+A D G     +   + VV    G +
Sbjct: 918  GDGL--FTVDPTTGHVRLMGPLGPPGGPPHELEVEAQDGGSPPRTSHFRLRVVIQDLGIH 975

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + +  +
Sbjct: 976  GLAPRFDSPTYRVDLPSGTTTGTQILQV 1003



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 18/170 (10%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVK 72
            ++   V A ++     S  V +TV + D+NDN P        +  P  +  G    +++ 
Sbjct: 2547 QYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA---ELLH 2603

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATD 130
            +EA+D D G +  + +++      GL  F +D  SG +     L      Q+ + VQA D
Sbjct: 2604 VEASDADPGPHGLVHFTLSSGDPLGL--FELDENSGALRLAHPLDCETQAQHQLVVQAAD 2661

Query: 131  TGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              G     +   VEV  V   N   P F  +    +++E     + V T+
Sbjct: 2662 PAGTHFALVPVTVEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2708


>gi|124487029|ref|NP_001074846.1| protocadherin-9 isoform a precursor [Mus musculus]
 gi|183396853|gb|AAI65991.1| Protocadherin 9 [synthetic construct]
          Length = 1237

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|441596423|ref|XP_004092928.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Nomascus
           leucogenys]
          Length = 804

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 10/188 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + + + D+NDNAP     P  ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251

Query: 63  AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       +VK+ ATD D GVN EI+YS++  S+     F +D  +G I    +L   
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFNVDFLTGEIRLKKQLDFE 311

Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + Y + ++A D GG S +  V + V+   N  +P    + +   + E     + VA  
Sbjct: 312 KLQSYEVNIEARDAGGFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPIPENQP-ETVVALF 369

Query: 178 TVSRLASG 185
           +VS L SG
Sbjct: 370 SVSDLDSG 377



 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
           +++TV ++D+NDNAP            +       I  + ATD D G NA++TYS+    
Sbjct: 436 LNMTVLVSDVNDNAPTFTQTSYTLFVRENNSPSLHIGSVSATDRDSGTNAQVTYSLLPPQ 495

Query: 92  --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
             H+    L     D        +    A + +   V ATD G    SS+ +V V V+  
Sbjct: 496 DPHLPLASLVSINADNGHLFALISLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDA 555

Query: 148 PNTRSPV 154
            N  SP 
Sbjct: 556 -NDNSPF 561


>gi|354474308|ref|XP_003499373.1| PREDICTED: protocadherin-9-like isoform 1 [Cricetulus griseus]
          Length = 1237

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDLNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|291408000|ref|XP_002720205.1| PREDICTED: protocadherin 11 X-linked isoform 6 [Oryctolagus
           cuniculus]
          Length = 1301

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GT 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 508 DAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 568 PIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   +IPP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VIPPSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAEI YSI   +  GL  F ID  SG I    K +
Sbjct: 683 ELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGL--FIIDQTSGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VADLGLHRLVVKAKDLGQPDS 761



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 21/193 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P      + + 
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
            P     G +   + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     
Sbjct: 258 IPENAPVGTS---VTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEP 314

Query: 116 LIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           L   E   + + V ATD G   ++ +V V+V      VP  + R  +       V +SE 
Sbjct: 315 LDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRY-IINPTNGTVVLSEN 373

Query: 168 ASINSTVATITVS 180
           A +N+ VA ITV+
Sbjct: 374 APLNTKVALITVT 386



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++    +F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIVDVND----EFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLIK-- 180

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 181 --GQNIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
          Length = 3291

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
           YLV     LDR+  +   +  +V A +          +  +++ D+NDNAP       R 
Sbjct: 416 YLVCVARRLDREERD--VYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 473

Query: 54  PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
             +P + +        +V++ A D D G N ++TYS+   ++T  H F IDP SG+I T 
Sbjct: 474 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGTHT--HWFSIDPTSGIITTA 527

Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
             L      Q  + V ATD G     +   VSV +   N   P FQ+  Y+ ++ EG   
Sbjct: 528 ATLDYELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 587

Query: 171 NSTVATITVSRLASG 185
            +    +T +   SG
Sbjct: 588 GTCFLQVTATDADSG 602



 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 39   LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            LTV++ D+ND AP  P      I  +       ++ ++ATD DLG N ++TY    VS  
Sbjct: 1628 LTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYG--GVSG- 1684

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
                F +DP SGV+ T   L   EQ  I  TV A D G     T + V V V   N  SP
Sbjct: 1685 --ESFSLDPNSGVLTTLRALDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSP 1742

Query: 154  VFQQNTYDVNVSEG 167
             F      + V EG
Sbjct: 1743 TFGNTHLSLEVPEG 1756



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 21/171 (12%)

Query: 18   KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
             +  Q++A +   +G A     +LTV + D+NDN P     +   + ++       I+ +
Sbjct: 2337 HYHLQLLAHDGPHEGHA-----NLTVLVEDVNDNVPIFSQSLYQVMMLEHTPPGSAILSV 2391

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT-GKLIAGEQ----YSITVQA 128
             ATD D G N  I+   YH+++     F +D  +G + TT G +  G +      + ++A
Sbjct: 2392 SATDRDSGANGHIS---YHLASPA-EGFSVDTNNGTLFTTVGAMALGHEGPGVVDVVLEA 2447

Query: 129  TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G  G+S+Q  V V +    N  +P F    Y V VSE     ST+ T+
Sbjct: 2448 RDHGAPGRSAQATVHVQLK-DQNDHAPSFTLPHYRVAVSEDLPPGSTLLTL 2497



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 22/197 (11%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
            V S E LD +  NP   R +++ + + G A +  V LT+ L D NDNAPR   P      
Sbjct: 2119 VQSAEGLDFET-NP---RLRLVLQAESGGAFAFSV-LTLTLQDANDNAPRFLQPHYVAFL 2173

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---I 117
             ++      ++++EA D D G   +I+YS+   S      F +DP +G I TT  L   I
Sbjct: 2174 PESRPLEGPLLQVEADDLDQGSGGQISYSLA-ASQPARGLFHVDPATGTITTTAILDREI 2232

Query: 118  AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
              E   + + ATD G     G ++ T++ +      N   P   Q  +++ VSE A + S
Sbjct: 2233 WAET-RLVLMATDRGSPALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGS 2286

Query: 173  TVATITVSRLASGCAIM 189
             +A +T + + SG  + 
Sbjct: 2287 EIAQVTGNDVDSGPVLW 2303



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            F+ Q+ AR+    A S  + +TV + D ND+AP  P +P   ++  E       +++++A
Sbjct: 1814 FQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFP-VPSYSVEVPEDAPVGTLLLQLQA 1872

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQATDT 131
             D D G N  +   +Y++       F ++P SG + T   L     A   +S+T      
Sbjct: 1873 HDPDEGDNGRV---MYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAA 1929

Query: 132  GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE-GASINSTVATITVSR 181
             G  S T+     V   N  +P F  +   + +   G S+N     +   R
Sbjct: 1930 AGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLR 1980



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 18/191 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           LV++ E LDR+  N   +  Q+ A +           L V L DIND+AP     R   +
Sbjct: 201 LVIAGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               +  G     ++++ A+D D G N  +TY I    + G   F ID  +G ++    L
Sbjct: 258 VSESLAPGSP---VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGFLKLERPL 314

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
              ++  + + VQA D G         V+V V   N   P    +F        VSE A 
Sbjct: 315 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAP 374

Query: 170 INSTVATITVS 180
               VA I+VS
Sbjct: 375 PGQLVARISVS 385



 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 31/198 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
           V+ +E  DR       +RF  +      T     V +TV + DIND+AP  P     +QI
Sbjct: 100 VLDRERRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQI 146

Query: 62  QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRID--PRSGVIETTGKLI 117
               A      +E A D D G    +    Y +S  G  + FR++  P  G       +I
Sbjct: 147 PEHTALGTRYPLEPAHDADAG---RLGTQGYALSGDGAGETFRLETRPGPGGAPVPELVI 203

Query: 118 AGE-------QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
           AGE        Y + ++A D G   + +Q +++V+++   N  +P F Q+ Y   VSE  
Sbjct: 204 AGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 262

Query: 169 SINSTVATITVSRLASGC 186
           +  S V  +  S   +G 
Sbjct: 263 APGSPVLQVFASDADAGA 280



 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 47   NDNAPRLPMIPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            ND++PRL   P     A        + ++ ATD D G N  +TYS+  +S      FRI 
Sbjct: 1093 NDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDKDSGPNGRLTYSLQQLSEDS-KAFRIH 1151

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
            P++G + T   L   +Q  + + VQ  D G   +S+   V V+V+   N  SP F Q
Sbjct: 1152 PQTGEVTTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVL-DLNDNSPTFLQ 1207



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 24/187 (12%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIV 71
             PG     + AR+      S   ++ V L D ND+AP    +P  ++   E       ++
Sbjct: 2437 GPGVVDVVLEARDHGAPGRSAQATVHVQLKDQNDHAPSF-TLPHYRVAVSEDLPPGSTLL 2495

Query: 72   KIEATDNDLG-VNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGE-- 120
             +EA D D    +A + YSI  +S      F+++PR   +        +  G L+  E  
Sbjct: 2496 TLEAIDADGSRSHATVDYSI--ISGNRGRVFQLEPRLAEVGDGVGPGPQALGCLVLLEPL 2553

Query: 121  ------QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  QY++TV A D G     + V V+V V   N   PVF + +Y V V E   + + 
Sbjct: 2554 DFESLTQYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAE 2613

Query: 174  VATITVS 180
            +  +  S
Sbjct: 2614 LLHVEAS 2620



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 8/159 (5%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDND 79
              V AR++        +++ V + D ND++P        +++  G+  + +  + A+D D
Sbjct: 1712 LTVYARDRGLPPLLTHITVRVTVEDENDHSPTFGNTHLSLEVPEGQDPQTLTTLRASDPD 1771

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKS 135
             G+N ++ Y I     +G   F +D  SG   TT  L       + + ++A D G    S
Sbjct: 1772 GGLNGQLQYRILGGDPSG--AFALDLTSGEFGTTRPLDREVEPAFQLQIEARDGGQPALS 1829

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +V V+V+   N  +P F   +Y V V E A + + +
Sbjct: 1830 ATLLVTVTVLDA-NDHAPAFPVPSYSVEVPEDAPVGTLL 1867



 Score = 39.3 bits (90), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 41   VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            V L+D+NDN+P  P      ++P    Q       +  + A D D G N+ +T+S+    
Sbjct: 876  VLLDDVNDNSPAFPAPEDTVLLP----QNTAPGTPVYTLRALDPDSGANSRVTFSLL-AG 930

Query: 95   NTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
              GL  F +DP +G +          G  + + V+A D G     +   + VV    G +
Sbjct: 931  GDGL--FTVDPTTGHVRLMGPLGPPGGPPHELEVEAQDGGSPPRTSHFRLRVVIQDLGIH 988

Query: 150  TRSPVFQQNTYDVNVSEGASINSTVATI 177
              +P F   TY V++  G +  + +  +
Sbjct: 989  GLAPRFDSPTYRVDLPSGTTTGTQILQV 1016



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 18/170 (10%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVK 72
            ++   V A ++     S  V +TV + D+NDN P        +  P  +  G    +++ 
Sbjct: 2560 QYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA---ELLH 2616

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATD 130
            +EA+D D G +  + +++      GL  F +D  SG +     L      Q+ + VQA D
Sbjct: 2617 VEASDADPGPHGLVHFTLSSGDPLGL--FELDENSGALRLAHPLDCETQAQHQLVVQAAD 2674

Query: 131  TGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              G     +   VEV  V   N   P F  +    +++E     + V T+
Sbjct: 2675 PAGTHFALVPVTVEVQDV---NDHGPAFPLSLLSTSLAENQPPGTLVTTL 2721


>gi|187957016|gb|AAI58118.1| Protocadherin 9 [Mus musculus]
          Length = 1237

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|336244981|gb|AEI28408.1| FAT tumor suppressor-like protein 4, partial [Liua shihi]
          Length = 254

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 12/180 (6%)

Query: 12  DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQ 69
           D    G ++ QV+A     T  ++ VS+TV   D+NDN+P  L  +  + + +  +A   
Sbjct: 66  DREEQGFYQLQVVASGGAVTGGTL-VSITVK--DLNDNSPHFLHAVESVDVVENWKAGHA 122

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQA 128
           I    A D D GVN  I YS+   +  GL  F I+ ++G I  TG L I    Y + + A
Sbjct: 123 IFHAIAVDPDEGVNGMILYSLKQ-NPHGL--FAINAKNGSISLTGLLDINAGSYQVEILA 179

Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           +D G    SS  I+ VSV    N  +PVF Q +Y+V++ E   +NS    +  S   SG 
Sbjct: 180 SDMGVPQHSSSFILTVSV-HDVNDNTPVFDQLSYEVSLLESEPVNSRFFKVQASDKDSGV 238



 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 15  NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGE-ARRQIVK 72
           N G ++ +++A +      S    LTV+++D+NDN P    +   + +   E    +  K
Sbjct: 169 NAGSYQVEILASDMGVPQHSSSFILTVSVHDVNDNTPVFDQLSYEVSLLESEPVNSRFFK 228

Query: 73  IEATDNDLGVNAEITYSI 90
           ++A+D D GVN EI Y+I
Sbjct: 229 VQASDKDSGVNGEINYTI 246


>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
 gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
          Length = 5118

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 26/195 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR---------L 53
            ++  + LDR+     K ++ V  R   G   +   ++ + +ND NDN P          +
Sbjct: 1858 LILNDTLDRET----KSKYDVRIRVSDGVQYT-ETNIIIEVNDTNDNPPMFDETVYSFDI 1912

Query: 54   PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
            P   P   Q G+       + ATDNDLG N  ++Y++  VS+     F ++P++G++  T
Sbjct: 1913 PENAPKGFQVGQ-------VVATDNDLGQNGLVSYTV--VSDWANDVFSLNPQTGMLTLT 1963

Query: 114  GKLIAGE--QYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
             +L   E   Y + VQA D G  S S TI     V   N  +P+F   +Y   + E   I
Sbjct: 1964 ARLDYEEVQHYILLVQAQDNGQPSLSNTITVYCNVLDLNDNAPIFDPMSYSSEIFENVPI 2023

Query: 171  NSTVATITVSRLASG 185
               V T++   + SG
Sbjct: 2024 GMEVVTVSAKDIDSG 2038



 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 10/190 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQ 60
            L V K+ LD +  +  +   +    + + +  SV +SLT+N++D NDN P    +I  ++
Sbjct: 2741 LTVGKDGLDYELAHQYEIWVEASDSDIKPSLRSV-MSLTINVSDANDNPPITEKLIYNVE 2799

Query: 61   IQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +   E+  Q IV I+A+D D G N EI+Y +    N     F I+  SG I TT +L   
Sbjct: 2800 VLEEESPPQMIVVIKASDRDSGDNGEISYRL---KNDYEGTFEINEDSGEIYTTMRLDRE 2856

Query: 120  E--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   Y++ V+A D G         V + +   N   P F +  + +NV+E A + S V  
Sbjct: 2857 ELADYALVVEAVDQGVPQLTGTASVMIHLLDKNDNPPKFTR-LFSLNVTENAELGSFVIR 2915

Query: 177  ITVSRLASGC 186
            +T S L  G 
Sbjct: 2916 VTSSDLDLGA 2925



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 8/132 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            S+ ++L D NDN P+   +  + + +  E    ++++ ++D DLG NA  +Y+     N 
Sbjct: 2880 SVMIHLLDKNDNPPKFTRLFSLNVTENAELGSFVIRVTSSDLDLGANANASYTF--SENP 2937

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
            G +KF+I+P+SG I   G L   +Q  Y + V A+D G   ++T + ++ +   N  +P 
Sbjct: 2938 G-NKFKIEPQSGNITVAGHLDREQQDEYILKVVASD-GAWRAETPITIT-IQDQNDNAPE 2994

Query: 155  FQQNTYDVNVSE 166
            F+ + Y  +  E
Sbjct: 2995 FEHSFYSFSFPE 3006



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 14/153 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAA-SVPVSLTVNLNDINDNAPRL-----PMIPPIQIQ 62
            LDR+  +   +R  ++A++   T   +  V+LT+ + D+NDN P+       +  P ++ 
Sbjct: 2542 LDREETD--TYRLTLMAQDSSITEPRATSVNLTIKVVDVNDNVPQFDSSNYKIAVPDKMG 2599

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                 R +   +A D D GVNA + Y +          F ++ ++GVI+T  +L +G  Y
Sbjct: 2600 PD---RFVFGAKALDLDEGVNARVQYKL---KGQDEQYFIVNEKTGVIKTKMQLESGTVY 2653

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
            SI + A D G     ++ +++++  P    PV+
Sbjct: 2654 SINIHAMDQGEMPQSSMAQLTIMQRPVELFPVY 2686



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 16/161 (9%)

Query: 34  SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
           + P+ + + + DINDNAP  P  P I +   E   A  +++   ATD D G N  +T   
Sbjct: 147 TYPIEVRIQVLDINDNAPEFPE-PSIAVSFSESAMAGTRLLLDAATDADTGENG-VTDQY 204

Query: 91  YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
             V     HKFR+        D     +ETTG L    +  Y++ + A D G       +
Sbjct: 205 EIVDGNVDHKFRLVTTTNPSGDTSYLHLETTGNLDRESRGYYNLNISARDGGSPPRMGYL 264

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +V+V +   N   P+F  + Y VN++E     + V T+  S
Sbjct: 265 QVNVTILDVNDNPPIFDHSDYSVNLNETVQPGTPVLTVMAS 305



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 12/184 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
           LDR+     K+   V+A +    A S    L +++ND+ND+ P         + +  A +
Sbjct: 462 LDRE--EISKYNLTVVALDGGIPARSATAHLIIDVNDVNDHEPVFEKSEYTAVLSELAPK 519

Query: 69  Q--IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI-- 124
              +  I ATD D GVNA+I Y I  +S   L  F +D  +G+I T+  L    Q S+  
Sbjct: 520 GSFVASIAATDEDTGVNAQIHYEI--LSGNELKWFTMDSATGLIVTSEPLDREVQDSVEL 577

Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ-QNTYDVNVSEGASINSTVATITVSR 181
           ++ A D G   K + T ++V+++   N  +P F      +V +SE A   S + T+  + 
Sbjct: 578 SISARDGGPNPKYAYTQLKVTIL-DENDEAPQFGPHQQINVTLSEDAPPQSVITTLMATD 636

Query: 182 LASG 185
              G
Sbjct: 637 HDQG 640



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 10/120 (8%)

Query: 68   RQIVKIEATDN--DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGEQY 122
            ++IV++ ATDN  D G N EI Y++  VS      F I+   G I     L+      ++
Sbjct: 3119 QRIVRVHATDNKKDSGSNNEIDYAL--VSANQSAYFGINKHDGWITLAKPLLDVLPNSRF 3176

Query: 123  SITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +TV+A D G   KS QT V V +V G N  +P F    Y V V E   I ST+ T+  +
Sbjct: 3177 ELTVKAIDRGVPPKSDQTRV-VIIVTGENRHTPEFSARRYQVIVPENVPIGSTIITVVAT 3235



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 37   VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            +SL++ + D+ND+ P           +++ +   +   + A+D+D+G NA I+YSI  + 
Sbjct: 1021 LSLSIAIVDVNDHTPVFDHTSYETSLLESTKVNARFFGLAASDSDVGENARISYSI--IE 1078

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNT 150
              G   F I P  G +     L   E+  Y++TV   D G   +SSQ  V + V+   N 
Sbjct: 1079 GNGDKVFGIFP-DGYLFVRSPLDREERDYYALTVACEDAGYPSRSSQVPVVIHVL-DEND 1136

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
             +P F  +T+  ++ E A  ++ V  +T
Sbjct: 1137 NAPQFTNSTFTFSIPENAPADTFVGKLT 1164



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 10/173 (5%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-KIEATDNDLG 81
             +A +KQ   +S  V +T+ + D+ND AP         +    +   +V  ++A D D G
Sbjct: 2127 FLAHQKQQRLSST-VQVTILIKDVNDEAPVFVSANETSVMENVSINTVVMAVKAVDYDEG 2185

Query: 82   VNAEITYSIY-----HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
             N  I YS+        SN     F ++P  G++     L       Y + + A D G  
Sbjct: 2186 RNGYIDYSLNTDQANADSNDNDLPFSLNPTDGLLRVVNALDRELCSSYVLNITAQDRGEP 2245

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
               T   + + +   N  SPVF    Y  +V+E ASI + V  ++ + +  G 
Sbjct: 2246 PQSTTTRLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGA 2298



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 12/157 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
            V + V + D+NDNAP   +  P  +   E       I+ I   D D G+N ++ YS++  
Sbjct: 1247 VKVKVIITDVNDNAPEF-LRGPYHVTLSEGSPEGTHIIHIFTQDADEGLNGDVYYSLFS- 1304

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGP 148
             N G H F +D  +G +     L    Q  + +T+ A D       SS T + + VV   
Sbjct: 1305 GNEGGH-FNLDSATGQLSLARHLDRESQDLHVLTIVARDAALVQPLSSNTTITI-VVLDE 1362

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P F Q++ +V+V E + I + +     S    G
Sbjct: 1363 NDNAPEFTQSSSEVSVPETSPIGTELMRFRASDADQG 1399



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 20/148 (13%)

Query: 45   DINDNAPRLPM-IPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            D+NDNAP     +P + I   E     ++I      D D G N  ITY++ H  N     
Sbjct: 923  DVNDNAPSFAQDLPSMLISVPENTAVGQEIYLPRVRDRDTGNNNRITYNLTHNPN---EL 979

Query: 101  FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG-----GKSSQTIVEVSVVPGPNTRS 152
            FRI   +GV+    + I  E     S+ + ATD G     GK S +I  V V    N  +
Sbjct: 980  FRISSVTGVLYLQ-RPIRSEPNSILSVELMATDGGSPPLFGKLSLSIAIVDV----NDHT 1034

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVS 180
            PVF   +Y+ ++ E   +N+    +  S
Sbjct: 1035 PVFDHTSYETSLLESTKVNARFFGLAAS 1062



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 28/121 (23%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-------- 59
           NLDR+  + G +   + AR+         + + V + D+NDN       PPI        
Sbjct: 237 NLDRE--SRGYYNLNISARDGGSPPRMGYLQVNVTILDVNDN-------PPIFDHSDYSV 287

Query: 60  ----QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
                +Q G     ++ + A+D+D+G N ++TY +        H+F +DP +GVI TT  
Sbjct: 288 NLNETVQPGTP---VLTVMASDSDMGDNGKLTYYLAETE----HQFTVDPETGVISTTEH 340

Query: 116 L 116
           L
Sbjct: 341 L 341



 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 21/153 (13%)

Query: 38   SLTVNLNDINDNAPRL---------PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            ++T+ + D NDNAP           P   PI  +       +++  A+D D G+N+++ +
Sbjct: 1354 TITIVVLDENDNAPEFTQSSSEVSVPETSPIGTE-------LMRFRASDADQGLNSQVVF 1406

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-V 145
            SI   +      F ID  SG +     L   +  +YS+ + A+D G  S  T +  +V +
Sbjct: 1407 SI--TAGNRRDTFHIDSISGSLYLHKSLDYEDITRYSLNITASDCGTPSLFTTLLYNVLI 1464

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
               N  +PVF        + EG ++ + + T+T
Sbjct: 1465 VDDNDNAPVFPSTAIVRQIKEGIALKTPIVTVT 1497



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 14/157 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
            +   + A+++     S    L + + D NDN+P   +  P Q  A  A        ++++
Sbjct: 2233 YVLNITAQDRGEPPQSTTTRLLIRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2289

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDT 131
             ATD D G N  I YSI  ++    H F I   +GV+     L    +  Y++TV+A D 
Sbjct: 2290 SATDVDEGANGRIRYSI--LTGDQNHDFSIGEDTGVVRVAKNLNYERKARYTLTVRAEDC 2347

Query: 132  GGKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
              ++S + + E+++ +   N   P F  + Y   V E
Sbjct: 2348 AIENSASDVAELTISILDINDNRPTFLDSPYLARVME 2384



 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 15/169 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVK 72
            ++   +  R+    + +    LT+ L D+NDN    P+    +  +  A  +     + +
Sbjct: 3280 EYHLNITVRDLGFKSLTDTAILTIILTDVNDNP---PVFNQTEYHSYIAENKPTGTFVFQ 3336

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT--- 129
              ATD D   NA I Y+ +  S T  H F ++  +G+I +       E+ + T+Q     
Sbjct: 3337 AHATDKDSPKNAIIQYA-FLPSGTDRHFFSVNSTTGIISSAAIFDYEERRTYTLQLKAKN 3395

Query: 130  -DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D+  +S  T+  + ++ G N   P F Q  +  +VSE + I S+V  +
Sbjct: 3396 PDSTMESYATLY-IHIL-GVNEFYPHFLQPVFHFDVSETSPIGSSVGAV 3442



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 12/176 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V+ E LDR+  +       + AR+           L V + D ND AP+      I +
Sbjct: 560 LIVTSEPLDREVQD--SVELSISARDGGPNPKYAYTQLKVTILDENDEAPQFGPHQQINV 617

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLI 117
              E    +  I  + ATD+D G N  ++Y +  ++      +F ID  +G + T   L 
Sbjct: 618 TLSEDAPPQSVITTLMATDHDQGTNGSVSYQLAPNMERLYPQQFAIDSITGQLTTRHTLD 677

Query: 118 --AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
                 Y I V A D G    +S+   V +SV    N  SP F    Y   +S G+
Sbjct: 678 RETMANYEILVIARDQGAPIPQSATATVYLSVA-DINDNSPEFYPKHYIYTLSSGS 732



 Score = 35.8 bits (81), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
            YL V +  LDR+  +   +   V   +    + S  V + +++ D NDNAP+        
Sbjct: 1092 YLFV-RSPLDREERD--YYALTVACEDAGYPSRSSQVPVVIHVLDENDNAPQFTNSTFTF 1148

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
             IP    +   A   + K+ A D D+G NAE+++ +     T    F ID R+G I+T  
Sbjct: 1149 SIP----ENAPADTFVGKLTAVDKDIGRNAELSFYL----ATQTQDFTIDTRNGFIKT-- 1198

Query: 115  KLIAGEQYSITVQATD----TGG--------------------KSSQTIVEVSV-VPGPN 149
             L + ++ ++  +  D    TGG                    +  Q  V+V V +   N
Sbjct: 1199 -LRSFDREALVSKMNDEDRRTGGGDGNVNYLILDAIVRDNGQPQRFQDKVKVKVIITDVN 1257

Query: 150  TRSPVFQQNTYDVNVSEGA 168
              +P F +  Y V +SEG+
Sbjct: 1258 DNAPEFLRGPYHVTLSEGS 1276


>gi|443732010|gb|ELU16902.1| hypothetical protein CAPTEDRAFT_195133 [Capitella teleta]
          Length = 952

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 15/174 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
           + VV++  LDR+  +  ++   +   ++     +   SLT+ ++D+NDN P     M   
Sbjct: 413 FHVVTEIKLDRE--SRAEYSLVIKCTDRGTNPKTTQKSLTIAVDDVNDNPPVFSANMYNA 470

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---ETTGK 115
              +       IVK+ ATD DLG NA+ITY + H     L KF ID  +G++   ET  +
Sbjct: 471 DLFENNYLGAFIVKMNATDADLGRNAQITYKLDH---KDLAKFEIDSVTGIVKARETLDR 527

Query: 116 LIAGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
              GE Y +TV A D G     SS T + V ++   N   P F  + Y + V E
Sbjct: 528 EEKGE-YLLTVTAVDNGHPDQLSSSTSLRVWIL-DVNDEKPQFTSSVYSLGVLE 579



 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V +   LDR+      +    +AR+  G   S   +L++++ D+NDN P+          
Sbjct: 626 VTTTRRLDREEHK--IYELIAVARDTNGPVLSSTATLSIHVMDLNDNPPQFTFPSADNNT 683

Query: 63  AGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
              + +      + +I A D DLG N  + Y +   +N  +  F IDP  GV+     L 
Sbjct: 684 VFMSHKVPLGFIVAQIHADDADLGSNGRVKYQLIQGNNDAV--FSIDPTLGVLSINVDLS 741

Query: 118 ---AGEQYSITVQATDTGGKSSQTIVEVSVV 145
                  + + V+ATD G +   T   + VV
Sbjct: 742 DQPDNRTWHLHVRATDHGDEPLSTTRVIRVV 772



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 18/191 (9%)

Query: 3   VVSKENLDRDP-PNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           +V  E LDR+  P   +F  ++IA +   +  S   S+ + + D NDN P        ++
Sbjct: 197 IVLTETLDREAIP---EFHLEIIAYDGGSSPRSGTASIVILVEDANDNVPVFEQTS-YEV 252

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIETTGKLI 117
              E       ++++ A D D G N++ITYS+   S     H F ++  +G +   G + 
Sbjct: 253 SIDENIPLMTTVIQLTAFDADSGTNSDITYSMSSRSEKQFGHLFGVNDSTGQVYVKGPVD 312

Query: 118 --AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY---DVN---VSEGA 168
              G  Y++ + A D G  S  T   + + +   N   P    NT    D N   V E A
Sbjct: 313 YEVGSAYNLNIIARDNGPGSIPTSANLLINIRDLNDHYPHLTINTLSARDTNRSSVPEDA 372

Query: 169 SINSTVATITV 179
            + + VA + V
Sbjct: 373 QVGTFVAHVIV 383



 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 26/165 (15%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----------PIQIQAGEAR 67
           +   +IAR+    +     +L +N+ D+ND+ P L +             P   Q G   
Sbjct: 319 YNLNIIARDNGPGSIPTSANLLINIRDLNDHYPHLTINTLSARDTNRSSVPEDAQVGTFV 378

Query: 68  RQIVKIEATDNDLGVNAEITYSI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS 123
             ++     D D G+N +   S+    + +  T   +F +     V E      +  +YS
Sbjct: 379 AHVI---VKDPDAGLNGQFNCSLEDNAFQLKQTYPEEFHV-----VTEIKLDRESRAEYS 430

Query: 124 ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           + ++ TD G   K++Q  + ++ V   N   PVF  N Y+ ++ E
Sbjct: 431 LVIKCTDRGTNPKTTQKSLTIA-VDDVNDNPPVFSANMYNADLFE 474



 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 16/162 (9%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR----QIVKIEATDNDLGVNAEITYSIYH 92
           +  TV++ DINDN P  P  P +  +  E+ +         EA D D   N+  +Y +  
Sbjct: 117 IKATVDITDINDNDPVFPD-PVMTFEVLESAQPGTIAFAVSEAEDVDNQSNSVQSYELL- 174

Query: 93  VSNTGLHKFRIDPRSG-------VIETTGKLIAGEQYSITVQATDTGGKS--SQTIVEVS 143
              +   + ++D           V+  T    A  ++ + + A D GG S  S T   V 
Sbjct: 175 TKGSDAWRLKVDEHPDGARDVRIVLTETLDREAIPEFHLEIIAYD-GGSSPRSGTASIVI 233

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           +V   N   PVF+Q +Y+V++ E   + +TV  +T     SG
Sbjct: 234 LVEDANDNVPVFEQTSYEVSIDENIPLMTTVIQLTAFDADSG 275


>gi|386118335|gb|AFI99115.1| fat protocadherin, partial [Clytia hemisphaerica]
          Length = 3015

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 15/147 (10%)

Query: 39  LTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           + V + D NDN P          I I        ++ + A D D G NA I YS+  VS 
Sbjct: 498 VNVTVADQNDNKPEFVQKKFYKAIDIDDA-VGTDLLMVTAVDRDAGENARIRYSM--VSG 554

Query: 96  TGLHKFRIDPRSGVIETTGKLI---AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNT 150
            G   F I P++G +    K I   A +QYSI V+A+D G    SS+  VE+ ++   N 
Sbjct: 555 DGQEFFSIHPQTGQVTLKKKFIKSKASKQYSIVVKASDHGTPSLSSEATVEMFII---NK 611

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATI 177
             P F+ N Y  NV+E A I   V T+
Sbjct: 612 DQPKFKSNYYG-NVAEDAQIGDKVVTV 637



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 12/168 (7%)

Query: 20   RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV-KIEATD 77
            +F+++  ++ G   +  + L  NL D+NDN P     +    ++   ++  ++ ++ ATD
Sbjct: 1514 KFKIMVVDQSGHKCNSDIFL--NLRDVNDNRPSFDQDLHTTTVRENTSQSVVIAQVRATD 1571

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQ--YSITVQATDTGGK 134
             D   N ++TYSI  + N     F ID R  V +    K+   +Q  YS+ +QA D G  
Sbjct: 1572 LDSYDNRKLTYSI--IKNNEQRIFAIDQRGIVTVNDPSKINRKKQPAYSLVIQAKDKGSP 1629

Query: 135  --SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              SS T ++++V+   +   P FQQ  Y+ N++E    ++ +  I V+
Sbjct: 1630 SLSSNTKLQIAVLSASDI-PPKFQQLGYEFNITENNEKDAVIGRIYVT 1676



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
             V  K+ LDR+     K   QV +   +GT  +  +SLT+NL+D+ND AP+       + 
Sbjct: 1298 WVYVKKPLDREVQETHKLIIQV-SDATKGTINTAELSLTINLSDVNDWAPKFTR-DRYEF 1355

Query: 62   QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
            +  E   +   I ++++ D DL       +     SN     F +DP+SGVI T  + I 
Sbjct: 1356 KMKENAISSHVIGQLKSHDKDLDSVVRYYFDPLEKSN---RMFSLDPQSGVI-TLLRPIP 1411

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             + Y+  V A D   ++S T+  +  V   + ++P   Q  Y ++V+E   I+  +    
Sbjct: 1412 PDTYTFKVIAFDGVNRNSATV--IITVEDIDDKNPQCLQAYYKIDVAEDWPISDALTKFR 1469

Query: 179  VSR 181
            V +
Sbjct: 1470 VKK 1472



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-IVKIEATDN 78
            F +  R   G       ++TV + D ND  P+         +   +   + ++   A D+
Sbjct: 990  FILPVRAVDGGGLFTLANVTVTVQDENDCTPQFEFTSYEAHVSTSQVSEESLIHALAIDD 1049

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK--SS 136
            D   N+E+ Y  + +         +D ++G+I   G    G +Y  +VQ +D G     S
Sbjct: 1050 DFESNSELKYVAHGLDYAS--PLVVDNKTGLISLAG-YAKGLKYQFSVQVSDNGYPILQS 1106

Query: 137  QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            +T ++VSV    + R   F  N+Y VNV+E  ++ S +  +T
Sbjct: 1107 RTGIQVSVKRW-DHRVFAFSNNSYTVNVAEDKAVGSILTQLT 1147



 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 10/155 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGE-ARRQIVKIEATDN 78
            F+++ + +     S    + +++ +INDN PR  P    ++I        ++++++A D 
Sbjct: 1210 FKLLVKARADNGESTNAFVYIHVRNINDNKPRFDPSTITVKISENTPVHSRVIQVKARDV 1269

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSS 136
            D     ++TY I +    G+  F ID  SG +     L     E + + +Q +D   K +
Sbjct: 1270 DDPYGDQLTYKINNGDAEGM--FLIDESSGWVYVKKPLDREVQETHKLIIQVSD-ATKGT 1326

Query: 137  QTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGA 168
                E+S+   +   N  +P F ++ Y+  + E A
Sbjct: 1327 INTAELSLTINLSDVNDWAPKFTRDRYEFKMKENA 1361



 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 17/152 (11%)

Query: 17  GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI---------QIQAGEAR 67
           G   F+V+AR      +   + LT+ LN +NDN P                      ++ 
Sbjct: 162 GSCTFKVVARVHNKMVSRTRLFLTI-LN-VNDNKPEFLNTSYTGHVTESMNSNTPVSQSD 219

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSI 124
              +++ A D D G+N +I YS   V       F ID ++G I T   L   +   ++  
Sbjct: 220 DTPLRVVAKDLDDGINGQIKYSF--VEKLANIYFTIDEKTGEIRTNFVLDCEKHPTEFEF 277

Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
            V+ATD G  +  +IV +++ V   N R P F
Sbjct: 278 NVKATDEGTPTFYSIVPLTISVKNINDRIPGF 309



 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
           I+K+ A D D+  NA+ITY+   +    +    ID  +G++     L A     + + V 
Sbjct: 735 ILKVSAHDQDIKENADITYTSTSLGEDSMDYLSIDHLNGLLTLAHPLDAETKTHHLVQVT 794

Query: 128 ATDTGG--KSSQTIVEVSV 144
           A+D G   KSS T VE+ V
Sbjct: 795 ASDNGTPRKSSFTYVEIRV 813



 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQ 127
           ++ + ATD D G NA ++YS +   N     F +D ++G++     L  +A +  ++   
Sbjct: 12  VMAVYATDKDTGSNARLSYS-FQKEN---QYFGVDSKTGIVHIKKSLKDVANKSLTLMTI 67

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           ATD G K+     ++ +    + +   F +  Y  ++SE
Sbjct: 68  ATDHGQKAYSGNAKLKIFVSYDFQRLEFSKPEYKFSISE 106


>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
          Length = 3257

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 19/180 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQ 60
           + +K  LDR+  +   FR  V A +      S    L +N+ D ND+AP   M       
Sbjct: 354 ITTKVKLDREMVDVHYFR--VTAMDDSFPPRSGTTMLQINVLDANDHAPTFEMNEYDASI 411

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-------HKFRIDPRSGVIETT 113
            ++      ++ ++ATD D+G NA++ YSI  ++  G+         F+IDP++GVI T 
Sbjct: 412 KESVSVGSTVITLKATDQDVGKNADVEYSIQSINGGGISSEEEDNKAFKIDPKTGVITTR 471

Query: 114 GKLI--AGEQYSITVQATD-----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             L     E Y++ V ATD     T  KSS   V + ++   N   P F + TY V + E
Sbjct: 472 LMLDRETTEVYTLIVAATDLASPQTARKSSSASVVIHIL-DDNDNYPQFSERTYTVALDE 530



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R  + A++    A S    L +N+ D+NDNAPR    +      +   A   IVK++A 
Sbjct: 592 YRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRFYTSLFQESIQENAPAGYSIVKVQAY 651

Query: 77  DNDLGVNAEITYSIYHVSNTGL----HKFRIDPRSGVIETTGKLIAGEQYSITVQ--ATD 130
           D D G NA+I Y+I    + G         +D  +G I TT +L   +Q     Q  ATD
Sbjct: 652 DADEGPNADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDREDQSKFMFQVIATD 711

Query: 131 TG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            G      S+  I+ V  V   N   PVF+   Y+  VSE     + VAT+T +
Sbjct: 712 QGTPPQSASASVIITVQDV---NDNDPVFEPKIYESVVSEDDPPGTPVATVTAT 762



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 12/151 (7%)

Query: 38  SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ VN+ D N+ AP     P      +       ++ + ATDND+G+NA+ITYS+     
Sbjct: 825 TVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVLVVSATDNDVGLNAQITYSL---GE 881

Query: 96  TGLH--KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPN 149
            G H  +F I+P++G I TT  L       Y +TV A D G    S  T VE+S+    N
Sbjct: 882 DGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTVTARDGGNPPLSDTTDVEISLT-DVN 940

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              PVF+Q  Y  +V E A + ++V  ++ +
Sbjct: 941 DNYPVFKQAAYSGSVLEDALVGTSVVQVSAT 971



 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 16/187 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPI 59
           ++  +KE LDR+  +  KF FQVIA ++     S   S+ + + D+NDN P   P I   
Sbjct: 688 WITTTKE-LDRE--DQSKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFEPKIYES 744

Query: 60  QIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRS--GVIETTGK 115
            +   +     +  + ATD D     E T   Y ++N     +F I  ++  GVI     
Sbjct: 745 VVSEDDPPGTPVATVTATDAD-----EDTRLHYELTNGNTRGRFAITSQNGRGVITVAQP 799

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
           L   ++  Y +TV A+D+GG++    V V++    N  +PVF+   Y  +V E A++ +T
Sbjct: 800 LDYKQEKRYILTVTASDSGGRTDTATVYVNITDA-NNFAPVFENAPYTASVFEDAAVGTT 858

Query: 174 VATITVS 180
           V  ++ +
Sbjct: 859 VLVVSAT 865



 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQ 60
            +++   LDR+      +   V AR+      S    + ++L D+NDN P  +        
Sbjct: 898  IITTRTLDRE--TTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSV 955

Query: 61   IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
            ++       +V++ ATD D+G+N +I+YS+          F IDP SGVI T   L   +
Sbjct: 956  LEDALVGTSVVQVSATDADVGLNGKISYSLSEKDKED-GSFVIDPTSGVIRTNKGLDRES 1014

Query: 119  GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
               Y +   A D G  +  + V V++ +   N   P F  +   + ++E + I STV  I
Sbjct: 1015 VAVYELEAYAIDRGSPTLSSSVPVTIHIDDINDSPPAFDSDKIVLYIAENSPIGSTVGEI 1074



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 83  NAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKL----IAGEQYSITVQATDTGGKSSQ 137
           N+ I+YS+  + ++     F IDP++G I T  KL    +    + +T        +S  
Sbjct: 326 NSPISYSMSSLLDSRTQGMFEIDPKTGTITTKVKLDREMVDVHYFRVTAMDDSFPPRSGT 385

Query: 138 TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           T+++++V+   N  +P F+ N YD ++ E  S+ STV T+
Sbjct: 386 TMLQINVLDA-NDHAPTFEMNEYDASIKESVSVGSTVITL 424


>gi|422744224|ref|NP_001258728.1| protocadherin-9 isoform c [Mus musculus]
          Length = 1038

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 296 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 352

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 353 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 408

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 409 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 467

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 468 VGVITVTDEDAGENKAVTLSILNDNEN 494



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 500 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 559

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 560 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 612



 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 414 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 472

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 473 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 528

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 529 QPPRSSTAKVTINVMDVNDNSPV 551



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 81  LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 137

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 138 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 190

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 191 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 246

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 247 TVYLSEKDPVNTKIALITVS 266


>gi|426340701|ref|XP_004034266.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Gorilla
            gorilla gorilla]
          Length = 3287

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 6/165 (3%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
            +   + AR+      +    + V +ND+NDNAP+        + + +A     +++I AT
Sbjct: 927  YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
            D D   N  + Y+ +     G   F I+P SG++ T  +L   A   Y +T  A D G  
Sbjct: 987  DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1045

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
              +T V   V V   N  +PVF    ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSFQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ +   LDR+     +   +V A++      S    + V + D ND++P        Q 
Sbjct: 384 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 436

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
           Q  E  R+       I+++ ATD D   NA + Y               F IDPRSG+I 
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496

Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           T+G++     E Y + V+A+D G   G  S T+     V   N  +P F +  Y   V E
Sbjct: 497 TSGQVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556

Query: 167 GASINSTVATITVS 180
               ++ V  +T +
Sbjct: 557 DVRPHTVVLRVTAT 570



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           +N+ D N + P         +   E R     IV I A+D+D+G NA ITY +       
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLL----EDN 900

Query: 98  LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
           L +FRID  SG I     L   +Q  Y++ + A D G   K+  T VEV +V   N  +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959

Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
            F  + Y   VSE A   ++V  I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
           LDR+      + F V AR+      S   S+TV + D+NDN P   M     ++  E   
Sbjct: 714 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 770

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
               +V + A D D   N+ I+Y I        ++F I  + GV   T  L      E+Y
Sbjct: 771 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERY 826

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              V             V +++    NT  PVFQ   Y V+V+E   + ST+  I+ S
Sbjct: 827 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPVGSTIVVISAS 883



 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
           ++++ A D D G    + YS+  + N+  L  F IDP+SG+I T   L   + E++ + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403

Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
            A D G    S+ T+V V+V    N  SPVF+Q  Y      NV EG  I    AT
Sbjct: 404 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 458



 Score = 43.1 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 63/141 (44%), Gaps = 15/141 (10%)

Query: 36   PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
            PVS  V + D+NDNAP  P     +++  E       + +I A D D G NA I Y I  
Sbjct: 1050 PVSFQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106

Query: 93   VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
            V       F++D  SG +     L   A ++Y I VQAT +    S+  V V +V   N 
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1164

Query: 151  RSPVFQQ-----NTYDVNVSE 166
             SPV        N Y  N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185



 Score = 42.7 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
           +A+V V +TV   D NDNAP+      +     + R    ++++ ATD D   N  + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
           I  +S      F ID  +G I+    L   A  +Y++ ++A D G    S+ T +    V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641

Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              N   P+F    + V+V E A +  +V  I
Sbjct: 642 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 673


>gi|403301747|ref|XP_003941544.1| PREDICTED: protocadherin Fat 3 isoform 1 [Saimiri boliviensis
            boliviensis]
          Length = 4559

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ I YS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRIIYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P   T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLPS-ETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
             + +
Sbjct: 2729 ILRI 2732



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFLGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G     T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVFLKEAFNADLSNIEYGVTILAKDGGKPPLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYAASVNEDIRMNTPILSI 2208



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGSQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKIHPKTGGISVSDVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  +F IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--RFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D G   S ++V + V    ++    F Q+ Y  +++E  +  + VA +
Sbjct: 1952 MLIVKVSD-GKFYSTSMVNIMVKEAMDS-GLHFTQSFYSTSIAENNTNITKVAIV 2004



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPIG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSEPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFVQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      +++I +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQIVSTDADSENNKIVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPALSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           ++++   K+G    +   +T+++ D ND+ P    P+      ++      ++ + A+D 
Sbjct: 443 YKLVVTNKEG---DLKAQVTISIEDANDHTPEFQQPLYDTFVNESVPVGTSVLTVSASDK 499

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
           D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G   
Sbjct: 500 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPY 556

Query: 135 SSQTIVEVSVVPGP-NTRSPVFQQ 157
             ++ V V++  G  N  SP+F++
Sbjct: 557 RHESEVNVTIRIGNVNDNSPLFEK 580



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKALDYERMSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 15/194 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGTIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTGGKSS----QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +Q  Y++TV+  D G   S      +    V    N  +P F       +V E + I 
Sbjct: 1000 YEKQQFYNLTVRVKDKGRPVSLSSVSFVEVEVVDVNENLHTPYFADFAVVGSVKENSRIG 1059

Query: 172  STVATITVSRLASG 185
            ++V  +T     SG
Sbjct: 1060 TSVLQVTARDEDSG 1073



 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IA+   G       ++ V L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLIAKATDGGGRFCQSTIHVILEDVNDNPPVFSSDRYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  S V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGSQVLAV 3258



 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            A S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 ALSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDYDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
           ++   IN   P      P  +   E       I+KI+A D D G N ++ ++I    NT 
Sbjct: 713 LDFYSINRQGPHFDKSFPSDVAVKEDLPVGADILKIKAYDADSGFNGKVLFTISD-GNTD 771

Query: 98  LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
              F ID  +G ++    +     + Y + +   D G   KSS  ++ ++V    N  SP
Sbjct: 772 -SCFNIDMETGQLKVLMPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINV-EDANDNSP 829

Query: 154 VFQQNTYDVNVSEGASINSTVATI 177
           VF Q++Y VN+ E +SI + +  +
Sbjct: 830 VFIQDSYSVNILESSSIGTEIIQV 853



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  +GVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDETGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLVVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDTFVNESVPVGTSVLTVSASDKDKG 502



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|26335177|dbj|BAC31289.1| unnamed protein product [Mus musculus]
          Length = 481

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 34  YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 90

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 91  LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 146

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 147 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 205

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 206 VGVITVTDEDAGENKAVTLSILNDNEN 232



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 238 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 297

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 298 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 350



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 152 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 210

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 211 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 266

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 267 QPPRSSTAKVTINVMDVNDNSPV 289


>gi|422744222|ref|NP_001258729.1| protocadherin-9 isoform d precursor [Mus musculus]
          Length = 1161

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|444706660|gb|ELW47986.1| Cadherin-related family member 2 [Tupaia chinensis]
          Length = 1547

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 13/161 (8%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV--KIEATDN 78
           +V+A +     ASV  ++T++L DIND++P  P  +  + +    A   +V   I ATD 
Sbjct: 474 EVVATDSVSQKASV-AAVTIHLRDINDHSPAFPQRLYVLSVSEDSATGSLVTSSIHATDL 532

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQ---YSITVQATDTGGK 134
           D G    ITYS+  +   G   F +DP SG +    G L+  E+   Y++T+QATD GG 
Sbjct: 533 DTGEWGRITYSL--LPGNGDDLFEVDPGSGTVTVRNGDLLDRERQAVYNLTLQATDGGGL 590

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE-GASINSTV 174
           S+ T +++ ++   N  +PV    +Y + V E G  ++ T+
Sbjct: 591 SNSTTLQIHLL-DVNDNAPVV-SGSYRIFVQENGGDVSVTI 629



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ--AGEARRQIVKIEATDN 78
           + +  +   G   S   +L ++L D+NDNAP +     I +Q   G+     V I+A DN
Sbjct: 578 YNLTLQATDGGGLSNSTTLQIHLLDVNDNAPVVSGSYRIFVQENGGDVS---VTIQAHDN 634

Query: 79  DL-GV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-------IAGEQYSITVQAT 129
           D  G  N+ + +S+  +     H F +DP +G++   G L         G +  +TV   
Sbjct: 635 DEPGTNNSRLVFSL--LPGPYSHNFSVDPDTGLLRNLGPLDREAIDPALGGRIVLTVLVA 692

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           D G     T V V++ V   N   PVF Q++Y   V E
Sbjct: 693 DCGVPQLSTEVNVTITVEDINDNMPVFNQSSYFFMVKE 730



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 42/152 (27%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LP------ 54
            LVV   +L  DP      RFQ  A    G       SL + + D+NDN P  LP      
Sbjct: 916  LVVRAYDLTTDP------RFQ--AYSNNG-------SLPITIEDVNDNTPYFLPEDKTFV 960

Query: 55   MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH---VSNTGL-----HKFRI--- 103
            +IP + +      +Q+  ++A D+D G N  I +SI H   VS  G        FRI   
Sbjct: 961  IIPELVL----PNQQVASVQARDDDSGDNGAIVFSILHVDFVSKDGAITPFQGYFRISTP 1016

Query: 104  ---DPRSGVIETTGKLIAGEQ--YSITVQATD 130
               +  +G IE    L +  Q  Y +TVQA D
Sbjct: 1017 VATNVFTGNIELVTSLDSTLQGTYQVTVQAQD 1048


>gi|327267817|ref|XP_003218695.1| PREDICTED: protocadherin-9-like isoform 1 [Anolis carolinensis]
          Length = 1237

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFTFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +    A S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKAVDGGQPARSSTAKVTINVMDVNDNSPVVIYPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPP 58
           L+  +  LDR+  +  K    V      G++     ++T+N+ D+NDN P + +   I P
Sbjct: 311 LITVQRALDREETSIHK----VTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISP 366

Query: 59  IQIQAGEARR-----QIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSG 108
           I      + +     +I  I  +D D  VN ++   I     +H+     +++ ++  S 
Sbjct: 367 INGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLE-TSS 425

Query: 109 VIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +++  G     ++++  + A+D+G  S +QT +    +   N   P+F Q   +++VSE 
Sbjct: 426 LLDYEGT----KEFTFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSEN 481

Query: 168 ASINSTVATITVSRLASG 185
                 + TI+ +   SG
Sbjct: 482 NRRGLYLTTISATDEDSG 499



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 32/198 (16%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKESQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NA++ Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGNNADVRYIFGAQVAPATKRLFALNNTTGLI- 312

Query: 112 TTGKLIAGEQYSI---TVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDV 162
           T  + +  E+ SI   TV A+D     ++  V ++V       P  + R  +   N   V
Sbjct: 313 TVQRALDREETSIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TV 371

Query: 163 NVSEGASINSTVATITVS 180
            +SE   IN+ +A ITVS
Sbjct: 372 YLSEKDPINTKIALITVS 389


>gi|187957346|gb|AAI57953.1| Pcdh9 protein [Mus musculus]
          Length = 1161

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P       I++
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKE-GQIEV 259

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
              E       ++++ ATD D+G NAEI Y     V+      F ++  +G+I     L 
Sbjct: 260 HIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 319

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSEGAS 169
             E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE   
Sbjct: 320 REETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSEKDP 378

Query: 170 INSTVATITVS 180
           +N+ +A ITVS
Sbjct: 379 VNTKIALITVS 389


>gi|118084779|ref|XP_416995.2| PREDICTED: protocadherin-9 isoform 2 [Gallus gallus]
          Length = 1203

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP------ 57
           V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P      
Sbjct: 626 VIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINVMDVNDNSPVVIYPPSNTSFK 685

Query: 58  --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             P+    G     + ++ A D D G+NAE+ Y+I + +N GL  FRIDP +G I    K
Sbjct: 686 LVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVNGNNKGL--FRIDPVTGNITLEEK 740

Query: 116 LIAGE--QYSITVQATDTG-GKSSQTIVEV 142
               +   + + V  +D G  KS  T+V V
Sbjct: 741 PTPNDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKESQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRFFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|291407990|ref|XP_002720200.1| PREDICTED: protocadherin 11 X-linked isoform 1 [Oryctolagus
           cuniculus]
          Length = 1350

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GT 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 508 DAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 568 PIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   +IPP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VIPPSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAEI YSI   +  GL  F ID  SG I    K +
Sbjct: 683 ELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGL--FIIDQTSGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VADLGLHRLVVKAKDLGQPDS 761



 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 21/193 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P      + + 
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
            P     G +   + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     
Sbjct: 258 IPENAPVGTS---VTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEP 314

Query: 116 LIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           L   E   + + V ATD G   ++ +V V+V      VP  + R  +       V +SE 
Sbjct: 315 LDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRY-IINPTNGTVVLSEN 373

Query: 168 ASINSTVATITVS 180
           A +N+ VA ITV+
Sbjct: 374 APLNTKVALITVT 386



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++    +F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIVDVND----EFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A   +     A D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|328714938|ref|XP_001945353.2| PREDICTED: neural-cadherin-like [Acyrthosiphon pisum]
          Length = 2288

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 32  AASVPVS---LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAE 85
           AA++  S   + V + D+NDN P          +  E       ++K+ ATD D GVN +
Sbjct: 137 AATIHTSTAVVVVFITDVNDNKPVFRECAKYNPKVEEGAPNGSPVLKVHATDEDKGVNGQ 196

Query: 86  ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIV 140
           + YSI    N    KF +D  +G + +T K+       G+  S+T++ATD G  S + + 
Sbjct: 197 VKYSIVQQPNQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTIKATDQGDPSLEGVC 255

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +V +   N   P+F +  Y  NV + ASI + +  ++ S
Sbjct: 256 SFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSAS 296



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP  P  +      + G 
Sbjct: 779 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPVFPQGVYWGNVTENGT 838

Query: 66  ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           A   ++ + A D D    G NA++ YSI        TG   F I+  +GVI+T    +  
Sbjct: 839 AGMVVMTMTAVDYDDPAEGTNAKLIYSIEKNVIEEETGTPIFEIESDTGVIKTAVCCLDR 898

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN---ST 173
           E+   YSI V A D GG        +  V   N   P F +  +   V E    N   + 
Sbjct: 899 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKEEWLTEVDETDGFNFPETP 957

Query: 174 VATITV 179
           + T+TV
Sbjct: 958 ILTVTV 963



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 69/171 (40%), Gaps = 9/171 (5%)

Query: 17  GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
           GKF    I    QG  +   V S TV + D+NDN P       ++   Q       I+++
Sbjct: 234 GKFVSVTIKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 293

Query: 74  EATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
            A+D D   N  I YS+        L  F I P SG I    K +  E Y +   A D G
Sbjct: 294 SASDEDADNNGAIVYSLTAPYPGDDLDYFEIQPESGWI-VLKKPLDRETYKLEATAQDKG 352

Query: 133 GK--SSQTIVEVSVVPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
               S    V++ VV   N   PV+    Y  + + E   + + V +I  S
Sbjct: 353 YPPLSRSVEVQIDVVDRANN-PPVWDHVVYGPIYIKENKPVGAKVVSIKAS 402



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 9/125 (7%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLT---VNLNDINDNAPRL--PMIPPIQIQAGEARRQ 69
            N  +FR QV  + +        V+ +   V L DINDN P+   P I     +  E  + 
Sbjct: 1014 NGFRFRIQVNDKGEDNDHDKYHVAYSWVVVKLRDINDNKPQFERPNIEVSVYENVEVGKS 1073

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
            +   +ATD D G  ++++Y+I  VS+    +FRI  + G +    +L   E  ++ + + 
Sbjct: 1074 LETFKATDPDQGGKSKVSYAIDRVSDR-RRQFRI-SQEGTVSIQRQLDREETPRHQVKIL 1131

Query: 128  ATDTG 132
            A D G
Sbjct: 1132 AIDDG 1136


>gi|422744495|ref|NP_001258727.1| protocadherin-9 isoform b precursor [Mus musculus]
          Length = 1203

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFN 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  EN
Sbjct: 591 VGVITVTDEDAGENKAVTLSILNDNEN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNI 735



 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + +      F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDEDAGENKAVTLSILNDN----ENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
          Length = 5000

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 15/172 (8%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI--PPIQIQAGEARRQIVKIEA 75
            ++   + AR+    +    VS+ +N+ D NDN+P    +  P I  +  E   ++V++ A
Sbjct: 1408 QYSLNITARDGGSPSLQAVVSMVINIRDCNDNSPIFAYVGVPEIDEEKPEGF-EVVRVSA 1466

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK------LIAGEQYSITVQAT 129
            +D+D GVN E+ +SI     +G   F IDP SG I T  +      ++A +Q+ +TV  T
Sbjct: 1467 SDSDSGVNGEVRFSISSQRPSG-DFFAIDPESGWITTNSRIDRESEIMATDQFILTVHGT 1525

Query: 130  DTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D       + + T+  V  V   N  +P F        +S   S N+ V T+
Sbjct: 1526 DLAVPVESRRTATVDVVIFVRDINDNAPRFTSQQA-AAISRSTSANTRVTTV 1576



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 18/193 (9%)

Query: 1    YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIP 57
            Y+V S E    D  NP  + F V A ++   A     S+ + +   N   P         
Sbjct: 2966 YIVPSPE----DTSNPNTYTFSVFAVDRGTPALYGEASVIITVTQDNSYTPVFATPSYFS 3021

Query: 58   PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            P+      +  +++++ A D D G NA ITYSI      G  KF ++  +G I T G  +
Sbjct: 3022 PVTANT-RSNTRVLQVLAVDQDTGSNAAITYSI--SDGNGTEKFDVEADTGWILTKGVSL 3078

Query: 118  AGE---QYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            AG+    Y + V+ATD G   K  +T V   ++   N  +PVF  +TY  +++E   +  
Sbjct: 3079 AGDVGITYQLLVKATDNGNIKKEDETTVTF-LITDSNDNAPVFDDDTYRSSIAE--DVGG 3135

Query: 173  TVATITVSRLASG 185
             VAT+      SG
Sbjct: 3136 YVATVRAEDDDSG 3148



 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 12/173 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEA 75
            +Q+  +   GT  S   ++ +NL D NDN P   +     + P     GE    +V   A
Sbjct: 1839 YQLQLQASDGTLTST-TTIDINLLDENDNDPVFSLSTYSFLVPEDEMVGEDVGVVV---A 1894

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D G+N E+ YS+      G   F +DP +G       L     + Y +TV ATD G 
Sbjct: 1895 TDPDAGLNGEVAYSVVEEGAPGEDVFYLDPATGAFRLQQSLDYEVKQHYFMTVMATDKGS 1954

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                +   V + V   N  +PV+    Y   V E  +I ++V T+T + L SG
Sbjct: 1955 SPRSSTATVYINVEDVNDNNPVYNPVDYSEEVPEDVAIGTSVVTLTATDLDSG 2007



 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 8/188 (4%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ- 60
           LV ++E LD +     +    + A ++     +    LT+++ D+ND  P    I   + 
Sbjct: 558 LVTTREKLDHE--TAAQVTLTITASDQGLEPMANTTILTIDIQDVNDEYPVFNQIAYSET 615

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
           ++     R ++++ ATD D GVN ++TY+      +G+  F +DP SG+++ T  L   E
Sbjct: 616 VEENSPARDLIQVLATDLDNGVNGDVTYTFSSDQYSGM--FSLDPESGLLQITVPLDREE 673

Query: 121 Q--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           Q  Y + + A+D G  S Q    V++ V   N   P F    Y  +V E       V  +
Sbjct: 674 QDSYELEILASDGGSPSLQATATVTIAVLDQNDNPPQFYPTEYYASVIENGPAGLFVTVV 733

Query: 178 TVSRLASG 185
           + + L  G
Sbjct: 734 SATDLDVG 741



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 23/162 (14%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---------PI 59
            LDR+  +   +   V A +K     S  ++LT+ + D+NDNAP   M P         P+
Sbjct: 2144 LDRETES--SYALLVQATDKGTPPQSSTMNLTIYITDVNDNAPAFSMTPYEATLDEDTPV 2201

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             +       + +K+ A+D D G+N+ I YSI+  S      F IDP +GV+     L   
Sbjct: 2202 GL-------EFLKVTASDPDEGLNSIIRYSIF--SGDSGRAFAIDPVTGVLSVNSGLNYE 2252

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
            ++  Y++TV+A D G  +  + V V++ V   N  +PVF+ +
Sbjct: 2253 QRSSYTLTVRAQDQGYSTQVSSVTVTITVADVNDNAPVFEDS 2294



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 8/167 (4%)

Query: 27   EKQGTAASVP-VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            + QG +  V  V++T+ + D+NDNAP       P  ++       IV++ A D D GVN 
Sbjct: 2264 QDQGYSTQVSSVTVTITVADVNDNAPVFEDSYAPSIMENNLPNADIVQVRADDADSGVNG 2323

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
             I + +    N GL  F I   SG+I+ T  L   +Q  + + V A D+G  S QT   +
Sbjct: 2324 MINFRLESDYN-GL--FTIGSTSGLIQVTEVLDYEDQNEFELIVIAEDSGTPSHQTRTTM 2380

Query: 143  SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
            ++ V   N   P F  + Y   VSE AS ++ V  +T + + +  A+
Sbjct: 2381 TLTVNDDNDHDPEFVSDFYRATVSEDASADTFVIQVTATDVDATAAL 2427



 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
            +LDR+  +  + + QV A ++   + S    L V + D++DN P   +  P + +A    
Sbjct: 3179 SLDRETSD--EHQIQVTAEDRAMYSQSATAILIVTVTDVDDNPP---VFLPREYRADVFE 3233

Query: 68   RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAG 119
                   +V + ATD D G NA+  Y I      G   F I+P +G+I T G L      
Sbjct: 3234 NSPSATPVVTVTATDADTGTNADFEYII--SGGDGTDFFTINPETGLILTQGNLDYETGK 3291

Query: 120  EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              Y +TV AT+           +  + G N   P F Q+ YD  V+E A+  + V  +
Sbjct: 3292 TTYHLTVAATNEQATMVDYAHVIVTLLGENEFYPQFTQHQYDFYVNEHATDGAPVGVV 3349



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 19/170 (11%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKI 73
             F   + A +   T  S  V L V++ D+NDNAP           ++ Q+G+   Q+V +
Sbjct: 2660 SFSLWIAATDTANTQLSDFVELQVSVLDVNDNAPLFDQSVYFTSVVEEQSGQV--QVVSV 2717

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQAT 129
             ATD D   N +++Y+I  + NT  + F I   SGVI TT  L    +A   Y +TV+AT
Sbjct: 2718 SATDEDSLSNGDVSYAI-TLGNTN-NAFDI-SSSGVITTTQPLDRETVA--SYILTVEAT 2772

Query: 130  DTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            D G   +S   IV V+V    + R    +   YD  + E A   + V T+
Sbjct: 2773 DGGNPSQSGSAIVVVTVTDINDNRMSFTKM--YDATIPEDAPPGTHVVTL 2820



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 6/151 (3%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            ++T  + D NDNAP           A +    +  + A D+D G+N EITYSI   S   
Sbjct: 3105 TVTFLITDSNDNAPVFDDDTYRSSIAEDVGGYVATVRAEDDDSGINGEITYSI---SGAD 3161

Query: 98   LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPV 154
               F ID  SG++   G L     +++ I V A D    S S T + +  V   +   PV
Sbjct: 3162 AALFSIDAVSGIVSLVGSLDRETSDEHQIQVTAEDRAMYSQSATAILIVTVTDVDDNPPV 3221

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F    Y  +V E +   + V T+T +   +G
Sbjct: 3222 FLPREYRADVFENSPSATPVVTVTATDADTG 3252



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 25/191 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIA-------REKQGTAASVPVSLTVNLNDINDNAPRLPM 55
            +V+ +NLDR+P +   +  +V+A        +++ + A V + +T    DINDNAPR   
Sbjct: 2033 IVTIKNLDREPES--FYNLEVVASDMTLDPEDRRSSTAQVSIIVT----DINDNAPRF-- 2084

Query: 56   IPPIQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
              P  ++  E  R    I+ + A D+D+  N+   Y  Y++   G+  F +    G ++ 
Sbjct: 2085 TNPDSVEIAEDTRTNVIIMVLRAEDDDVERNS---YVEYYLLTPGV-PFAVSRVEGNMQV 2140

Query: 113  TGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
            TG L    +  Y++ VQATD G     + + +++ +   N  +P F    Y+  + E   
Sbjct: 2141 TGPLDRETESSYALLVQATDKGTPPQSSTMNLTIYITDVNDNAPAFSMTPYEATLDEDTP 2200

Query: 170  INSTVATITVS 180
            +      +T S
Sbjct: 2201 VGLEFLKVTAS 2211



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 11/177 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
           +V+   LDR+  +   +   + A +   T  +  + + V + D+NDN+P           
Sbjct: 233 LVTNSLLDRETED--FYILNISATDNSSTPRTGYLIVNVTITDVNDNSPIFTQTTYFATV 290

Query: 62  -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAG 119
            ++  A   +V + ATD D G N +I   +Y + N     F +DP +G I    +L    
Sbjct: 291 NESSAAGTSVVHLNATDIDQGSNGDI---VYRLKNELTDNFALDPDTGWITLLRQLPYVA 347

Query: 120 EQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
             Y   V ATD G   +SS   V V +V   N  SPV +    ++  S  ASI+ T+
Sbjct: 348 NGYLFEVTATDKGSPSQSSSAFVNV-MVEDENDHSPVIEVLIPEIEASGVASISETM 403



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)

Query: 29   QGTAASVPV--------SLTVNLNDINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDND 79
             GT  +VPV         + + + DINDNAPR        I ++  A  ++  + A D D
Sbjct: 1523 HGTDLAVPVESRRTATVDVVIFVRDINDNAPRFTSQQAAAISRSTSANTRVTTVHADDPD 1582

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQ- 137
             GVN ++TY++    +TG+  FR+D  +G +  T  + +    YS+ ++A D G    Q 
Sbjct: 1583 TGVNGQVTYTLI---STGV-PFRLDLITGELTLTQPIPSSANIYSLDIRADDAGSNPQQQ 1638

Query: 138  -TIVEVSVVPGPNTRSPV-FQQNTYDVNVSE----GASINSTVATITVSRLAS 184
             T   ++++      S + + QNTY  +V E    G  I + VA  +  R A+
Sbjct: 1639 STPFSLAIIISDGQSSILNYVQNTYTGSVRENQPAGTEIVTVVAQYSDGRSAT 1691



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 12/167 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIE 74
            ++  Q+ A +      S  ++L V + D+N+NAP         ++  E+      ++   
Sbjct: 984  EYNLQIQATDYGTPPLSSSMNLLVTVRDVNNNAPVFVDSINTTLRLTESIPVNSIVIHAL 1043

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
            ATD D G N  I+Y I   ++     F I P  G++     L     +QY +T++ATD G
Sbjct: 1044 ATDADQGTNGLISYRI---TSGNTDSFGIFP-DGMVYVKRALDREQVDQYDLTIEATDGG 1099

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                +S  ++E+ +V   N   P F   TY+  +SE   I + V TI
Sbjct: 1100 VPSMTSTLMLEI-IVLDENDNRPFFDNATYNFYLSEEDDIGAAVGTI 1145



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 8/125 (6%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
            V + + + D ND+ P   +    +I+  E  +    I  ++ATD D+  N +I+Y+I   
Sbjct: 1321 VEVEITVLDENDHRPSFSVDLQREIEVTECLQIGDTIGGVQATDMDINSNGQISYTITGG 1380

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            +  G+  F ++  SG +  TG L   A  QYS+ + A D G  S Q +V + + +   N 
Sbjct: 1381 NLDGV--FGVNANSGEVYLTGYLDHEATSQYSLNITARDGGSPSLQAVVSMVINIRDCND 1438

Query: 151  RSPVF 155
             SP+F
Sbjct: 1439 NSPIF 1443



 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 20/140 (14%)

Query: 38  SLTVNLNDINDNAP-------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
           S+ + + D ND+AP       R  ++  IQ+ +      +  + ATD D G+NA+I YSI
Sbjct: 488 SIIIYVVDENDHAPMFLQESYRAGLLESIQVGS-----FVKSVTATDADEGINADIVYSI 542

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVP 146
              +      F+ID  +G++ T  KL      Q ++T+ A+D G +  ++ TI+ +  + 
Sbjct: 543 ---TGDEYGWFQIDNGTGLVTTREKLDHETAAQVTLTITASDQGLEPMANTTILTID-IQ 598

Query: 147 GPNTRSPVFQQNTYDVNVSE 166
             N   PVF Q  Y   V E
Sbjct: 599 DVNDEYPVFNQIAYSETVEE 618



 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 14/191 (7%)

Query: 3    VVSKENLDRD----PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP 58
            + SK +LDR+       P  F  +V   +           + +++ DIND+ P       
Sbjct: 1178 ITSKVSLDRESLVEAGQPTTFSIRVRVHDSGQPQLQDHADVNIHVVDINDSPPVFNR-ES 1236

Query: 59   IQIQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
             Q    E  +    I+++ ATD+D+G N+ I YSI  VS     +F ID   G I     
Sbjct: 1237 YQASVSELAQNETLIIRVSATDDDVGDNSYILYSI--VSGNEEKRFHIDHVHGQIVLIAP 1294

Query: 116  LI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY-DVNVSEGASIN 171
            L     E Y + V+A D G    ++ VEV + V   N   P F  +   ++ V+E   I 
Sbjct: 1295 LDREVTEGYVLRVKARDGGIVPQESFVEVEITVLDENDHRPSFSVDLQREIEVTECLQIG 1354

Query: 172  STVATITVSRL 182
             T+  +  + +
Sbjct: 1355 DTIGGVQATDM 1365



 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 18/165 (10%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGE-ARRQIVKI--EATDNDLGVNAEI-TYSIYH 92
           V + + +ND+NDN+P  P    I +   E A    V+I   A D D   N  I TY I  
Sbjct: 149 VDIKITVNDLNDNSPVFPQ-SVISLSFSENAHSGSVQILPSAMDADKDSNGYISTYLIES 207

Query: 93  VSNTGLHKF-------RIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG--KSSQTIV 140
           VS  G   F       R D    V   T  L+  E    Y + + ATD     ++   IV
Sbjct: 208 VSGGGDDAFLLQTFRPREDAEYTVSLVTNSLLDRETEDFYILNISATDNSSTPRTGYLIV 267

Query: 141 EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            V++    N  SP+F Q TY   V+E ++  ++V  +  + +  G
Sbjct: 268 NVTITD-VNDNSPIFTQTTYFATVNESSAAGTSVVHLNATDIDQG 311



 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 39   LTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
            +TVN+ D NDNAP     P    I+   A    VK + ATD DL      T   Y + + 
Sbjct: 1757 VTVNVLDENDNAPVFTNGPYTASIRENVASNSPVKTVMATDADLD-----TIIFYSIVDG 1811

Query: 97   GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPV 154
                F ID  +G I T G +   +   Y + +QA+D G  +S T ++++++   N   PV
Sbjct: 1812 ATDLFSIDSTTGQIRTRGVVDRESSAVYQLQLQASD-GTLTSTTTIDINLL-DENDNDPV 1869

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLASG 185
            F  +TY   V E   +   V  +  +   +G
Sbjct: 1870 FSLSTYSFLVPEDEMVGEDVGVVVATDPDAG 1900



 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+   E LD +  N  +F   VIA +    +     ++T+ +ND ND+ P          
Sbjct: 2345 LIQVTEVLDYEDQN--EFELIVIAEDSGTPSHQTRTTMTLTVNDDNDHDPEFVSDFYRAT 2402

Query: 62   QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
             + +A      I+ T  D+   A + Y +   S+ G  KF IDP  G I TTG L    Q
Sbjct: 2403 VSEDASADTFVIQVTATDVDATAALRYRLN--SDIG-SKFTIDPLGGRILTTGLLDREVQ 2459

Query: 122  --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
              Y +TV   D   + + T V V V+   N   P F   +Y
Sbjct: 2460 SSYLLTVTVDDGPSRLATTSVRVEVL-DVNDNPPRFSPTSY 2499



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 15/106 (14%)

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI------AGE--QYS 123
            I A DND+G N E+TYS      T  H  F ++  +G I +   L       AG+   +S
Sbjct: 1145 IHAVDNDVGGNGELTYSF-----TANHTLFTLNSVTGAITSKVSLDRESLVEAGQPTTFS 1199

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
            I V+  D+G    Q   +V++ V   N   PVF + +Y  +VSE A
Sbjct: 1200 IRVRVHDSGQPQLQDHADVNIHVVDINDSPPVFNRESYQASVSELA 1245


>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
          Length = 2300

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 14/189 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +++ + LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+    P     
Sbjct: 1757 LIATKRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSR-PVYSFD 1810

Query: 63   AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
              E       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L   
Sbjct: 1811 IPEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVLDYE 1868

Query: 118  AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            A + Y +TV+A D GG+ +   V  +++   N   PVF  N+Y  ++ E   + STV   
Sbjct: 1869 AQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPVFSLNSYSTSLMENLPLGSTVLVF 1927

Query: 178  TVSRLASGC 186
             V+    G 
Sbjct: 1928 NVTDADDGI 1936



 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1136 FSFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1193

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YS+  +      +F ID  SG +   G L   A   YS+ +QA D+
Sbjct: 1194 SASDVDEGSNGLIHYSV--IKGNEERQFAIDSNSGQVTLIGTLDYEATPAYSLVIQAVDS 1251

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +S+ +   N  +P F ++T  V+V E   I   V+++T +   SG
Sbjct: 1252 GTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1306



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 11/151 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1689 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1745

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1746 -DSFRIDPESGDLIATKRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1802

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASGC 186
             +  Y  ++ E  +  S VA I  +   SG 
Sbjct: 1803 SRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1833



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
           +LDR+      +   V+A +      S    + V+L D+NDN+P   +  P+Q    IQ 
Sbjct: 607 SLDRE--EQAFYSLLVLATDLGSPPQSSVARINVSLLDVNDNSP---VFYPVQYFAHIQE 661

Query: 64  GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            E     I  + ATD DLG N  + YS+   S     +F+++ +SGVI T   L   E+ 
Sbjct: 662 NEPGGSYITTVSATDPDLGPNGTVKYSL---SAGDRSRFQVNAQSGVISTKMALDREEKT 718

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 719 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 777

Query: 179 VSRL 182
            S +
Sbjct: 778 ASSM 781



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 8/164 (4%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 513 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENSPTGTELLVLRATDGD 572

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
           LG N  + +S+   +      FR+DP SG + T   L   EQ  YS+ V ATD G     
Sbjct: 573 LGDNGTVRFSLQE-AEADQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 631

Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           ++  ++V +   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 632 SVARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGSYITTVSAT 675



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 12/173 (6%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
           ++ +V+A    GT A   V + + + D+NDN+P  L  +  + + +  +A   I + +A 
Sbjct: 823 YQLKVVA--SGGTVAGDTV-VNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAV 879

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG--G 133
           D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G   
Sbjct: 880 DPDEGVNGMVLYSLRQNPK---NLFAINEKNGNISLLGPLDVHVGSYQIEILASDMGVPQ 936

Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           +SS  I+ V  V   N   PVF Q +Y+V +SE   +NS    +  S   SG 
Sbjct: 937 RSSSVILTV-YVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFQVQASDKDSGA 988



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K   A S    + V + DINDN P     +  ++I      
Sbjct: 2071 LDRE--EVSTYSLTVVATDKGQPALSSSTEVVVRVLDINDNNPVFAQALYKVEINENTLT 2128

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V      +FRID  +G I T  K +  E+   Y 
Sbjct: 2129 GTDIIQVLAADGDEGTNGQVRYGI--VEGNANQEFRIDSVTGTI-TVAKPLDREKTPTYL 2185

Query: 124  ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G         VS+V    N   P+F+ + Y V V E
Sbjct: 2186 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVTVPE 2229



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-----KIEATDNDLGVNAEITYSIY 91
           + + V + DINDN P   +      QAG     +V     ++ A D D G NA+I Y + 
Sbjct: 195 LQVNVTVQDINDNPP---VFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQ 251

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-----GKSSQTIVEVSV 144
                    F++DP +G+I     L   A  QYS+TVQA D G     G++   I  + V
Sbjct: 252 DEGT----PFQMDPETGLITVREPLDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV 307

Query: 145 VPGPNTRSPV-----FQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
               N   PV     F   +   +V E A + + VA +TV+   S  A
Sbjct: 308 ----NDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDADSPAA 351



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 26/197 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1016 KSELDRELQD--RYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1073

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ VS   T  H+F    R  ++  
Sbjct: 1074 QRAGSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAVSGEITNTHQFD---RESLMRR 1130

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    +S TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1131 RGTAV----FSFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1185

Query: 170  INSTVATITVSRLASGC 186
              + V  ++ S +  G 
Sbjct: 1186 NLTQVLRVSASDVDEGS 1202



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 8/166 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN P    +   ++   E+     +  ++
Sbjct: 921  GSYQIEILASDMGVPQRSSSVILTVYVHDVNDNPPVFDQL-SYEVTLSESEPVNSRFFQV 979

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI+Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 980  QASDKDSGANGEISYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLVVVASDRA 1037

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +     V V+V+    N   P+F    Y     E     S V  +
Sbjct: 1038 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKV 1083



 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 6/141 (4%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTG 97
            +T+ + D+NDN P       +          I+  I A D D G N E+ Y I    N  
Sbjct: 1476 VTILVTDLNDNVPMFISQNALAADPSAVIGSILTTIMAADPDEGANGEVEYEIV---NGD 1532

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
               F +D  SG +     L+  +  Y++ V ATD G +  ++  E++++       PVF 
Sbjct: 1533 TDTFIMDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGPVFT 1591

Query: 157  QNTYDVNVSEGASINSTVATI 177
            Q  Y   + EG  I + V +I
Sbjct: 1592 QPKYITILKEGEPIGTNVISI 1612



 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 10/139 (7%)

Query: 38  SLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           SL + +NDIND+ P     +  + + +       +  + ATD D G+NA + YSI  VS 
Sbjct: 421 SLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVCGVSATDGDSGLNANLRYSI--VSG 478

Query: 96  TGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
            GL  F I   SG++ T   G L      Q  + + A D G     +  ++ V +   N 
Sbjct: 479 NGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTLLDVND 538

Query: 151 RSPVFQQ-NTYDVNVSEGA 168
             PVF Q   Y+V+V E +
Sbjct: 539 EKPVFSQPEGYNVSVVENS 557



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 38   SLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVS 94
            +L++++ D NDN P  P    + +   E  R    +  + ATD+D G NA++ YSI   +
Sbjct: 1261 TLSIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNADLQYSITGTN 1319

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            N G   F I P +G I    KL    Q  Y + + A D G
Sbjct: 1320 NHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDKG 1357



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 21/124 (16%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
            ++  + A++K     S  +S+ +++ D NDN P  P         G+  + IV+      
Sbjct: 1347 YKLNITAKDKGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1398

Query: 73   ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
                + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV
Sbjct: 1399 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FGIDQVKGTIYTNAEIDREFANLFELTV 1457

Query: 127  QATD 130
            +A D
Sbjct: 1458 KAND 1461


>gi|444713167|gb|ELW54075.1| Protocadherin alpha-13 [Tupaia chinensis]
          Length = 1863

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 37   VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYH-V 93
            V L +N+ D+NDNAP    ++  +++        +V K+ ATD D G N +I YS    V
Sbjct: 1296 VQLLINILDVNDNAPEFDHLLYKVRVLENALNGTLVIKLNATDPDEGTNGDIVYSFRKPV 1355

Query: 94   SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG----GKSSQTIVEVSVVPG 147
            S    + F I+P SG I+T G L   E+  Y I V+A D G          +VEV  +  
Sbjct: 1356 SPAVAYAFIINPNSGEIKTKGLLDFEEKKLYEIPVEAVDKGNIPMAGHCTLLVEVLDI-- 1413

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             N  +P     +  + V E   IN+ VA I+VS   SG
Sbjct: 1414 -NDNAPEVTITSLSLPVREDTQINAVVALISVSDRDSG 1450



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 7/155 (4%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVS 94
           V L + + D+NDN P        +++    A    ++K+ ATD D GVN E+TYS+  + 
Sbjct: 226 VQLFIRVLDVNDNDPEFDQSEYKVRLMENAAVGTFVIKLNATDRDEGVNGEVTYSLMSIK 285

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
             G   F +D  +G +   G L   E   Y I VQATD G    +    V V ++   N 
Sbjct: 286 PNGSPLFILDRNNGEMRVNGTLDYEENKFYEIEVQATDKGTPPMAGHCTVWVEILDA-ND 344

Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             P     T  + V E A   + +A I+VS   SG
Sbjct: 345 NPPEVTVTTLSLPVREDAQSGTVIALISVSDPDSG 379



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 24/197 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPM 55
           +V K++LDR+          V+   K     SV + +TV   D+NDN P       ++ +
Sbjct: 630 LVLKKSLDREETPEFSLLLMVMDGGKPELTGSVQIQITVL--DVNDNPPEFDKSGYKVAL 687

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS---IYHVSNTGLHKFRIDPRSGVIET 112
              +Q        +++++ A+D D G+N EI+Y    I  VS   +  F I+  +G I  
Sbjct: 688 FENVQNDT-----RVIQLNASDVDQGLNGEISYGIRIILPVSEKCI--FSINSDTGEIRV 740

Query: 113 TGKLIAGE--QYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            G L   E   Y I V A D G    +  T V+V V+   + R P     +  + + E A
Sbjct: 741 YGTLDFEENSMYEIQVNAMDKGIPSMTGHTTVQVEVLDLNDNR-PEVVVTSLSLPLQEDA 799

Query: 169 SINSTVATITVSRLASG 185
            + + +A I+VS   SG
Sbjct: 800 QVGTVIALISVSDQDSG 816



 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 15/139 (10%)

Query: 37   VSLTVNLNDINDNAPR-------LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
             +L V + DINDNAP        LP+    QI A      +  I  +D D G+N ++T S
Sbjct: 1404 CTLLVEVLDINDNAPEVTITSLSLPVREDTQINA-----VVALISVSDRDSGINGQVTCS 1458

Query: 90   IY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPG 147
            +  HV    +  ++ +  S V+++     +   Y++ V A D G  S      VSV V  
Sbjct: 1459 LTPHVPFKLVATYK-NYYSLVLDSALDRESISGYTVVVTARDGGSPSLWATASVSVEVAD 1517

Query: 148  PNTRSPVFQQNTYDVNVSE 166
             N  +P+F Q  Y V V E
Sbjct: 1518 VNDNAPLFAQPEYTVFVKE 1536


>gi|57043447|ref|XP_544296.1| PREDICTED: protocadherin beta-1 [Canis lupus familiaris]
          Length = 818

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 39  LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
           + V + D+ND+ P+   ++  +Q+    A   +V  + ATD D G N EITYS+     T
Sbjct: 228 IRVEVLDVNDHVPQFSRLVYRVQVPENSANGSLVATVSATDLDEGSNKEITYSLAQNPET 287

Query: 97  GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV 145
            L  F+ID ++G +   G L   A E Y I +QATD GG S+ + V V VV
Sbjct: 288 ILQTFQIDSQTGEVRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVV 338



 Score = 42.4 bits (98), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 21/199 (10%)

Query: 6   KENLDRD----PPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAP-RLPMIPPI 59
           KE LDR+      +P    F+++  E  Q   A V V       DINDNAP  L   P +
Sbjct: 87  KEKLDRESLCGKADPCVLHFEIVLVEPLQSFRAEVRVF------DINDNAPIFLNKQPLL 140

Query: 60  QIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLH-KFRID-PRSGVIETTGKL 116
           +I           ++ A D D+G+N    Y++   +   LH +FR   P+   +     L
Sbjct: 141 KIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHLHTRFRSQGPKYAELVLDKPL 200

Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              EQ   ++T+ A D G      I  + V V   N   P F +  Y V V E ++  S 
Sbjct: 201 DREEQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVPQFSRLVYRVQVPENSANGSL 260

Query: 174 VATITVSRLASGCAIMNKE 192
           VAT++ + L  G    NKE
Sbjct: 261 VATVSATDLDEGS---NKE 276


>gi|403301749|ref|XP_003941545.1| PREDICTED: protocadherin Fat 3 isoform 2 [Saimiri boliviensis
            boliviensis]
          Length = 4591

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            V++ E LDR+ P  G     +  R   G   +   ++ V + D NDNAP+   +     +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609

Query: 62   QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKL--I 117
            +A   R  +V +++A D D G N+ I YS+Y  ++  +     IDP +G + T G    +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRIIYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669

Query: 118  AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
                 S  V+A D G   K S   V + V+P   T  P F Q+ Y   ++E  +I STV 
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLPS-ETFLPSFTQSQYSFTIAEDTAIGSTVD 2728

Query: 176  TITV 179
             + +
Sbjct: 2729 ILRI 2732



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + E LD +  +  K    ++ R+++         + VN+ D ND++P    P+    
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
              ++      ++++ A D D G NAE+ Y+I    NTG + F+I+P  G+I    +  + 
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NTFKIEPVLGIITICKEPDMT 1632

Query: 118  AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
               Q+ ++++ TD G    S+  IV +SV    N+  P F    Y   V+E   I ++V 
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1691

Query: 176  TIT 178
             I+
Sbjct: 1692 LIS 1694



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
           LT+N+ D NDN+P       IQ       +++     +I+++EA D DLG N E+TYS+ 
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 871

Query: 92  HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
               T   +F I+  +G++    +L   +   YS+ ++A D      Q    V++   + 
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927

Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             N  SP F  ++Y V V E   + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958



 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 42   NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
            N+ DINDN+P    LP    +Q+ A E    I ++ A D D G N E+TY    V     
Sbjct: 2073 NIEDINDNSPVFLGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGANGEVTY----VLQDDY 2127

Query: 99   HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
              F I+P SG +   E     ++  +Y +T+ A D G     T VE+ +    N   PVF
Sbjct: 2128 GHFEINPNSGNVFLKEAFNADLSNIEYGVTILAKDGGKPPLSTSVELPITI-VNKAMPVF 2186

Query: 156  QQNTYDVNVSEGASINSTVATI 177
             +  Y  +V+E   +N+ + +I
Sbjct: 2187 DKPFYAASVNEDIRMNTPILSI 2208



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 15/154 (9%)

Query: 30   GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
            G + S   ++T+ + DINDN P       L  +P    +      Q++ + AT  D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGSQVLAVFATSKDIGTN 3268

Query: 84   AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
            AEITY I   +  G  KF+I P++G I  +  L     +++ + V+A D G  +   +  
Sbjct: 3269 AEITYLIRSGNEQG--KFKIHPKTGGISVSDVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326

Query: 142  VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            V++ +   N   P F Q+ Y   +SE A +  +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
            + + V + D NDN P+ P     QI+  E  R+     I +  A D D G NAEI+YSI 
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
              ++ G  +F IDP++G++ +  +  AG    +T++A D G      +++  +E    P 
Sbjct: 1297 DGNDDG--RFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            P+     F +  Y+  V E   +   V  ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++ + + LDR+    G +   V A ++        + + + + D+NDNAP    P+  P+
Sbjct: 1099 VITAADILDRE--TTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++       +++I+A D D   N ++TY I   S    + F I+ ++G+I TT + +  
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214

Query: 120  EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            EQ   + + V  TD G    Q+ + V V V   N   P F +  Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
            D NDN P     P   +   E      +I++IEATD D     +++Y+I+  + +  + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDSISMRK 1508

Query: 101  FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
            FRIDP +GV+ T  +L   A +++ + +   D      + +  V V V   N  SP F  
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568

Query: 158  NTYDVNVSEGASINSTVATIT 178
              Y+ +V E A++ S V  +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 13/175 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
            NLD +      F F V  R+    Q TA S PV + + + D+NDN P     +   + + 
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1894

Query: 63   AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
                  +++K+ ATD D  V  E+TYS+   S   L  F ID  SGV+      ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951

Query: 123  SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             + V+ +D G   S ++V + V    ++    F Q+ Y  +++E  +  + VA +
Sbjct: 1952 MLIVKVSD-GKFYSTSMVNIMVKEAMDS-GLHFTQSFYSTSIAENNTNITKVAIV 2004



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 19   FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
            F F+V        AA++P+       TV+++    D+NDN P         I ++     
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPIG 2830

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
             ++ ++ A D D G N ++TYS++  S     +  F ID  +G I T   L       ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSEPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890

Query: 124  ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +V A+D G     SS  +V V V    N  +PVF Q  Y  NV E       VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFVQEVYRGNVKESDPPGEVVAVLS 2947



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 31   TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
            T A   V++ + +ND+NDN P    P       +A      +++I +TD D   N  + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQIVSTDADSENNKIVHY 2324

Query: 89   SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
             I   +      F ID  SG+I  T +++  E     ++ V++TD+G    SS+ +V + 
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSTDSGFPALSSEVLVHI- 2382

Query: 144  VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             +   N   PVF Q  Y+  VSE A     V  +  S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
           ++++   K+G    +   +T+++ D ND+ P    P+      ++      ++ + A+D 
Sbjct: 443 YKLVVTNKEG---DLKAQVTISIEDANDHTPEFQQPLYDTFVNESVPVGTSVLTVSASDK 499

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
           D G N  ITYSI   ++  L  F I+  +GVI TT +L    + E Y   V+A+D G   
Sbjct: 500 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPY 556

Query: 135 SSQTIVEVSVVPGP-NTRSPVFQQ 157
             ++ V V++  G  N  SP+F++
Sbjct: 557 RHESEVNVTIRIGNVNDNSPLFEK 580



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 90   IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
            IY V +  ++  F I+P SGVI TT K +  E+   Y + +QAT+  G +S   V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTRKALDYERMSSYQLIIQATNMAGMASNATVNIQIV 1760

Query: 146  PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
               N  +PVF  + Y  ++SE A INS V ++  S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 15/194 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
            +V   + LDR+  +   +  ++ AR+K   G      V+L V L+D+ND +P  +P    
Sbjct: 885  IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942

Query: 59   IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            +++ +       I  +E  D DLG+  ++ YS+ +  N    +F ID  SG I  + +L 
Sbjct: 943  VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGTIRLSKELD 999

Query: 118  AGEQ--YSITVQATDTGGKSS----QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
              +Q  Y++TV+  D G   S      +    V    N  +P F       +V E + I 
Sbjct: 1000 YEKQQFYNLTVRVKDKGRPVSLSSVSFVEVEVVDVNENLHTPYFADFAVVGSVKENSRIG 1059

Query: 172  STVATITVSRLASG 185
            ++V  +T     SG
Sbjct: 1060 TSVLQVTARDEDSG 1073



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
            + +IA+   G       ++ V L D+NDN P            +    +  + +++A D 
Sbjct: 3099 YSLIAKATDGGGRFCQSTIHVILEDVNDNPPVFSSDRYNACVYENTATKALLTRVQAVDP 3158

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
            D+G+N ++ YS+   S  G+          ++E          Y+I+V+ATD   G+S  
Sbjct: 3159 DVGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            ++  V++ V   N   PVF++  Y V V E  S  S V  +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGSQVLAV 3258



 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 8/147 (5%)

Query: 32   AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
            A S  V + + ++D+NDN P    +I    +     R   V  ++A+D D      + YS
Sbjct: 2373 ALSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDYDRLEYS 2432

Query: 90   IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
            I  +S      F +D +SGVI  +   K      YS+ V  +D G  +S   V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488

Query: 148  PNTRSPVFQQNTYDVNVSEGASINSTV 174
             N  SP F Q+TY   V E A+  + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENAAAGTKV 2515



 Score = 41.2 bits (95), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           I+KI+A D D G N ++ ++I    NT    F ID  +G ++    +     + Y + + 
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802

Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             D G   KSS  ++ ++V    N  SPVF Q++Y VN+ E +SI + +  +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSSIGTEIIQV 853



 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--------ETTGKLIAGEQ 121
            ++++ A D D G + EI YSI     +GL +F ID  +GVI        ETTG       
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDETGVITAADILDRETTGS------ 1113

Query: 122  YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
            Y +TV ATD G     + +EV + V   N  +P+  +  Y
Sbjct: 1114 YWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153



 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 45  DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           D+ND  P   P    + I ++   R  + ++ ATD D+G N E  Y  Y  +   L  F 
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGEFYY--YFKNKVDL--FS 205

Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
           + P SGVI  +G+L   E+  Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F+I+PRSG+I T   L  +  E Y + V   +   K+  TI     +   N  +P FQQ 
Sbjct: 420 FKINPRSGLIVTAQPLNTVKKEVYKLVVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475

Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
            YD  V+E   + ++V T++ S    G
Sbjct: 476 LYDTFVNESVPVGTSVLTVSASDKDKG 502



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
            A  +++ + ATD D G   +I+Y+I  +++    +F ID    VI TT +L     + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567

Query: 121  QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
              SI V+A D GG+++   V V VV   N  +P F    Y  +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609


>gi|291407994|ref|XP_002720202.1| PREDICTED: protocadherin 11 X-linked isoform 3 [Oryctolagus
           cuniculus]
          Length = 1340

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GT 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 508 DAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 568 PIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   +IPP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VIPPSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAEI YSI   +  GL  F ID  SG I    K +
Sbjct: 683 ELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGL--FIIDQTSGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VADLGLHRLVVKAKDLGQPDS 761



 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKE 313

Query: 115 KLIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V ATD G   ++ +V V+V      VP  + R  +       V +SE
Sbjct: 314 PLDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRY-IINPTNGTVVLSE 372

Query: 167 GASINSTVATITVS 180
            A +N+ VA ITV+
Sbjct: 373 NAPLNTKVALITVT 386



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++    +F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIVDVND----EFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.5 bits (88), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|291407992|ref|XP_002720201.1| PREDICTED: protocadherin 11 X-linked isoform 2 [Oryctolagus
           cuniculus]
          Length = 1342

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GT 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 508 DAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 568 PIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   +IPP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VIPPSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAEI YSI   +  GL  F ID  SG I    K +
Sbjct: 683 ELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGL--FIIDQTSGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VADLGLHRLVVKAKDLGQPDS 761



 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 21/193 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P      + + 
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
            P     G +   + ++ ATD D+G NA+I +   + VSN     F ++  +G+I     
Sbjct: 258 IPENAPVGTS---VTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEP 314

Query: 116 LIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
           L   E   + + V ATD G   ++ +V V+V      VP  + R  +       V +SE 
Sbjct: 315 LDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRY-IINPTNGTVVLSEN 373

Query: 168 ASINSTVATITVS 180
           A +N+ VA ITV+
Sbjct: 374 APLNTKVALITVT 386



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++    +F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIVDVND----EFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A   +     A D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|76879890|dbj|BAE45762.1| putative protein product of Nbla00548 [Homo sapiens]
          Length = 656

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)

Query: 15  NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
           N  +  F V + ++   +     ++T+N+ D NDNAP+        P+   ++ G    +
Sbjct: 237 NINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIR 296

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
           +  I+  D D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV 
Sbjct: 297 VTAID--DKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFFITVT 352

Query: 128 ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           A D G    SSQ  V ++V    N  +P F Q+     + E  SI S V T++
Sbjct: 353 AKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHMSATIPESHSIGSIVRTVS 404



 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 37  VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
            S+TVN+ D+NDN+P        P  ++   +   ++ + ATD D G NA I Y++   S
Sbjct: 470 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 528

Query: 95  NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
           ++ L  F IDP +GVI T G L     + Y +TV+A +   +   +   V++ + G N  
Sbjct: 529 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEY 586

Query: 152 SPVFQQNTYDVNVSEGA 168
            P F    Y   +SE A
Sbjct: 587 VPRFVSKLYYFEISEAA 603



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
           LDR+  +   +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 23  LDREKVS--HYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLG 80

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
             + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 81  YTVTRVTTSDEDIGINAISRYSIMDAS----LPFTINPSTGDIVISRPLNREDTDRYRIR 136

Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           V A D+G   S  +     V   N  +P F + +Y ++  E   I S V  +
Sbjct: 137 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVTQV 186


>gi|403290094|ref|XP_003936167.1| PREDICTED: cadherin-related family member 2 [Saimiri boliviensis
           boliviensis]
          Length = 1308

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 12/152 (7%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV--KIEATDN 78
           QV+A +      SV + +T++L DIND+ P  P  +  + +    A   +V   I ATD 
Sbjct: 450 QVVATDSVSQNFSVAM-VTIHLRDINDHRPTFPQSLYDLMVPEHSATGYVVTSSIHATDP 508

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQ---YSITVQATDTGGK 134
           D G   +ITYS+  +   G   F++DP SG +    GKL+  E    Y +T+QATD G  
Sbjct: 509 DTGAWGQITYSL--LPGNGADLFQVDPTSGTVTVRNGKLLDRESQAVYYLTLQATDGGNL 566

Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
           SS T +++ ++   N   PV    +Y++ V E
Sbjct: 567 SSSTTLQIHLL-DINDNEPVV-SGSYNIFVQE 596



 Score = 42.4 bits (98), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDL 80
           + +  +   G   S   +L ++L DINDN P +     I +Q  E    ++ I+A DND 
Sbjct: 554 YYLTLQATDGGNLSSSTTLQIHLLDINDNEPVVSGSYNIFVQEEEDNVSVI-IQAHDNDE 612

Query: 81  -GV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-------IAGEQYSITVQATDT 131
            G  N+ + +S+  +     H F +D  +G++   G L         G +  +TV  +D 
Sbjct: 613 PGTNNSRLLFSL--LPGPYNHNFSLDSDTGLLRNLGPLDREAIDPALGGRIVLTVLVSDC 670

Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
           G     T V V++ V   N   P+F Q++Y+  V E
Sbjct: 671 GEPVLTTKVNVTITVEDINDNLPIFNQSSYNFTVKE 706



 Score = 35.8 bits (81), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 11/107 (10%)

Query: 33  ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--QIVKIEATDNDLGVNAEITYSI 90
            SVPV L++++ D  D  P+          A +A +   ++K+EA D D G+N  + YSI
Sbjct: 221 CSVPVLLSISVVDQPDLDPQFVREFYSASVAEDAAKGTSVLKVEAVDGDKGINDPVIYSI 280

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGK------LIAGEQYSITVQATDT 131
            + +  G      D   GVI   G       L  GE+  + V AT+T
Sbjct: 281 SNSTRPGWFDIGAD---GVIRVNGSLDREELLDEGEEVQLQVTATET 324


>gi|347543897|gb|AEP02521.1| PCDH15, partial [Chaerephon plicatus]
          Length = 1918

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
           + F + A +  G   S PV++ + + D NDN P  P I         +  G++   ++++
Sbjct: 470 YTFSITAFD--GVQESKPVTVNIRVMDANDNTPTFPEISYNVYVYTDMSPGDS---VIQL 524

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDT 131
            A D D G N EITY I  V   G   F I+  +G+I      +LI G  Y++TVQA D 
Sbjct: 525 TAVDADEGSNGEITYEIL-VGAQG--DFIINKETGLITIAPGVELIVGRTYALTVQAADN 581

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 + S   V + V+P  N   P F Q  Y + +SE   I + +  +
Sbjct: 582 APPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNL 631



 Score = 38.9 bits (89), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQY 122
           EA   + ++ ATD D G+N ++ YS+ + +    H F I   +G I TT KL     + Y
Sbjct: 724 EANAFVGQVRATDPDAGINGQVYYSLGNFN----HLFHIT-SNGSIYTTVKLDREVRDYY 778

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V ATD       + + +++ V   +  SPVF  +TY V V E
Sbjct: 779 ELLVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEE 823


>gi|291407996|ref|XP_002720203.1| PREDICTED: protocadherin 11 X-linked isoform 4 [Oryctolagus
           cuniculus]
          Length = 1332

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GT 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 508 DAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 568 PIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   +IPP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VIPPSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAEI YSI   +  GL  F ID  SG I    K +
Sbjct: 683 ELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGL--FIIDQTSGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VADLGLHRLVVKAKDLGQPDS 761



 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKE 313

Query: 115 KLIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V ATD G   ++ +V V+V      VP  + R  +       V +SE
Sbjct: 314 PLDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRY-IINPTNGTVVLSE 372

Query: 167 GASINSTVATITVS 180
            A +N+ VA ITV+
Sbjct: 373 NAPLNTKVALITVT 386



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++    +F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIVDVND----EFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLI--- 179

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 180 -KGQNIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|198475479|ref|XP_001357055.2| GA20415 [Drosophila pseudoobscura pseudoobscura]
 gi|198138842|gb|EAL34121.2| GA20415 [Drosophila pseudoobscura pseudoobscura]
          Length = 1885

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 9   LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-----QIQ 62
           LDRD PN   ++RF V A+++ G        + VNL DINDNAP+ P             
Sbjct: 293 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 352

Query: 63  AGEARRQIVKIEATDNDLGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
           AG A   +  I+  D +   NA++ YSI        TG   F I+  +G+I+T    +  
Sbjct: 353 AGSAVMTMSAIDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIETETGLIKTAVCCLDR 412

Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE--GASINST- 173
           E+   YSI V A D GG        +  V   N   P F ++ +   V E  G  I  T 
Sbjct: 413 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWFTEVDETNGTYIPETP 471

Query: 174 VATITV 179
           + T+TV
Sbjct: 472 ILTVTV 477



 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 20/158 (12%)

Query: 38  SLTVNLNDINDNAPRLP-MIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV 93
           ++ +N+ D+NDN P         QI   + R   ++I+++ ATD D+     I   +Y +
Sbjct: 207 TVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINI---VYFL 263

Query: 94  SNTGLH-------KFRIDPRSGVIETTGKLIAGE-----QYSITVQATDTGGKSSQTIVE 141
           +  G+        KF I+  +G I     L   +     Q+  TV A D GG+      +
Sbjct: 264 TGQGIDPDNPANSKFDINRTTGDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYAD 323

Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + V +   N  +P F Q  Y  NV+E  +  S V T++
Sbjct: 324 IQVNLKDINDNAPQFPQGIYFGNVTENGTAGSAVMTMS 361


>gi|47215089|emb|CAG04543.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 891

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 9/168 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
           +R +++A +    A S    L V + D+NDN P    P++     +      +++ + AT
Sbjct: 503 YRIEIVAVDSGNPALSSTNFLKVQVTDVNDNIPIFSPPLLKVDFAEGNYPGDKVLDVLAT 562

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTG-- 132
           D D G NAE+TYSI   +   L  F +D  SG +     L     E Y   V A D G  
Sbjct: 563 DADSGSNAELTYSISEPA--ALELFEVDANSGEVRVRAVLNREQREHYRFHVAAADKGVP 620

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           GK+    VE++V+   N   P F  + Y  +V+E  +  + V  +TV+
Sbjct: 621 GKTGTATVEITVL-DVNDNDPKFMLDDYSFSVNENMAPLNPVGVVTVT 667



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 26/156 (16%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR---------- 52
           ++S  + DR+  +   FR + +  +      +  V++T+N+ D NDNAP           
Sbjct: 697 ILSSISFDREKESTYTFRLKAV--DAGDPPRTSYVAVTINVLDENDNAPYVTKPSNSTFT 754

Query: 53  --LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
             LP  PP          ++  +EA D D G+NAE+ Y++   +  GL  FRI P SG I
Sbjct: 755 HLLPDTPP--------DTRVAVVEAEDIDSGLNAELVYTLAGGNPFGL--FRIAPGSGEI 804

Query: 111 ETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
               KL    +  + + V+ +D G     T   V V
Sbjct: 805 TLAQKLAGSHRGLHRLVVRVSDRGKPPRHTTALVHV 840



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 15/140 (10%)

Query: 60  QIQAGEARRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            I     RR++V  ++ A D D G+N EI YS +  S+T     RID  +G+I   G++ 
Sbjct: 318 WISVSNRRRRLVASEVRANDADTGINGEIDYSFHQASDTVQRLLRIDRFTGIIYVKGQVD 377

Query: 118 AGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP---------VFQQNTYDVNVS 165
             E+      V A D G  S  + V V++ V   N  SP         V  +N    N+S
Sbjct: 378 REEENFLKFFVAARDRGPNSKTSKVLVTITVKDQNDNSPSIEIRGIGLVTHRNGV-ANIS 436

Query: 166 EGASINSTVATITVSRLASG 185
           E   + + VA + VS    G
Sbjct: 437 EDMPVGTPVALVQVSDRDEG 456


>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
          Length = 2755

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 13/179 (7%)

Query: 19   FRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQ-IVKIEA 75
            + F V+A++  Q    +  V + +NL+D+NDNAP    M     +    A    +V+++A
Sbjct: 1357 YVFFVVAKDGGQKDIKNKTVQVRINLSDVNDNAPVFTEMAYHKNLSVNTASDTLVVRVKA 1416

Query: 76   TDNDLGVNAEITYSIYHVSNTG-----LHKFRIDPRSGVIETTGKLIAGEQYSITVQATD 130
             D D G+N E+ YS+   SN+G      + FRID  +G + T   L       I V A D
Sbjct: 1417 DDRDSGINGEVRYSL---SNSGTDLATYNMFRIDAVTGDLYTKQTLTTSGVRMIQVVAND 1473

Query: 131  TGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCA 187
             G    ++  IVEV+V  G    S  F Q +Y V + E  S  + V T+  + + SG  
Sbjct: 1474 LGTPELNATGIVEVTVGGGSGDLSLRFDQASYHVMIRENPSRGTPVTTVRATFVGSGSG 1532



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 75/163 (46%), Gaps = 9/163 (5%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEAR--RQIVKIEAT 76
            F V AR+     ++  V +T  L+D+NDN P   P    + +   EA     IV+++A 
Sbjct: 95  EFTVFARDAGDLESNAVVKVT--LSDVNDNHPEFYPQNYSVNVDLSEANVGTTIVRVQAQ 152

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKS 135
           D D G    I YSI   ++ G   F I   SG I     L   E+ Y + V ATD  G +
Sbjct: 153 DPDTGSAGSIQYSITAGNDRGF--FSIITSSGRINLVSPLPLEEKIYKLEVTATDGEGLT 210

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           S     V + + G N+  PVF   TY  +V E     +TV TI
Sbjct: 211 SIIPAHVYISITGQNSHPPVFDHLTYSFSVPEDTVHGTTVGTI 253



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 12/157 (7%)

Query: 36   PVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
            P+S T  LN    DIND  P+ P   P+ +        +V++  T ND   N  + Y   
Sbjct: 1689 PLSSTCTLNIAVVDINDQRPKFPDPMPVNLSEAADVGSLVRL-ITANDRDRNPTLLYDFT 1747

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVVPGP 148
               N G + F ID  SG I T  K +  E    Y++ +   DT   S+QTI+EV+V    
Sbjct: 1748 PNGNPG-NTFTIDRFSGRI-TLAKPLDHEVRKHYAVGLSVNDTK-HSAQTILEVNV-EDE 1803

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N   PVF Q +Y  ++ E       + T+T +   SG
Sbjct: 1804 NDNHPVFSQQSYQADIPEFTGSGVKILTVTATDADSG 1840



 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 12/148 (8%)

Query: 39   LTVNLNDINDNAPRLPM-IPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSN 95
            L V L DINDNAP+    +       GE   Q  + ++ A D D   NA+I Y+I    N
Sbjct: 1589 LVVQLTDINDNAPKFAQNVYYSSTWEGEEGDQVYVTQVLAVDADSNSNADIMYNIIG-GN 1647

Query: 96   TGLHKFRI-DPRSGVIETTGKLIAGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
             G   F+I  P SG++ TT  L    Q  YS+T++A D G    SS   + ++VV   N 
Sbjct: 1648 EGF-TFQIYPPHSGIVVTTLPLDYEIQDSYSLTIEAVDHGQPPLSSTCTLNIAVV-DIND 1705

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
            + P F  +   VN+SE A + S V  IT
Sbjct: 1706 QRPKF-PDPMPVNLSEAADVGSLVRLIT 1732



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 11/192 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ +  +LDR+  N   +   V+A +          ++ + + D+NDN+P+     PI+ 
Sbjct: 596 VITTTVSLDREEKN--FYNLTVVASDHGDPKKFDYTNVKIFVGDLNDNSPKFLNSQPIEA 653

Query: 62  QAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI 117
              E   +   ++ I A D+D   N  I+YS+    +  + K F I P++G++ TT +++
Sbjct: 654 TVNENEPKGTSVLNISAKDDDALENGTISYSLIAEGDVNVLKYFAIHPKTGLV-TTLEVL 712

Query: 118 AGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ   Y++ V A D G  +  +   + V V   N   P+F      + V E     S 
Sbjct: 713 DFEQKNRYALGVIAKDHGNPARSSSSSLVVHVKDENDGRPIFSSQNLTIQVVENIKTGSI 772

Query: 174 VATITVSRLASG 185
           V  +      SG
Sbjct: 773 VGKVEAKDWDSG 784



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 11/159 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQ 60
            +  K+ L+R+  +  K+   V+AR+      S  V +T+N+ D ND++P          
Sbjct: 493 FIYIKQELNREEKD--KYTLTVVARDSGKGYRSSSVPVTINVLDANDHSPVFKQSFYTFY 550

Query: 61  IQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I    A   IV +  ATD D G NA   Y  Y       H  +ID  +GVI TT  L   
Sbjct: 551 ILENMAAGTIVGQTTATDKDTGENA---YLRYQFEQPEPH-LKIDSDTGVITTTVSLDRE 606

Query: 120 EQ--YSITVQATDTGGKSSQTIVEVSVVPGP-NTRSPVF 155
           E+  Y++TV A+D G         V +  G  N  SP F
Sbjct: 607 EKNFYNLTVVASDHGDPKKFDYTNVKIFVGDLNDNSPKF 645



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           + +++ D+NDN+P+      +QI   E       +    ATD D G N  I YS+   + 
Sbjct: 322 VNISITDVNDNSPQF-QTSSLQIPVWEDEDLSTTLYTAHATDPDSGSNGVILYSM---AG 377

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
              + F+++  SG I T  + +  EQ   Y + ++A D G     + + +++ V   N  
Sbjct: 378 DSSNTFKLNSTSGEI-TLLRSLDYEQVQLYKLYIEARDQGNPPRTSTLSLTISVLNVNDN 436

Query: 152 SPVFQQNTYDVNVSEGASINSTV 174
           SPVF  ++Y  NVSE A + S +
Sbjct: 437 SPVFSASSYVFNVSESALVQSNI 459



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 38   SLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            ++ V + D+NDN P        + I     +R I ++ A D D G NA ++Y+I  +S  
Sbjct: 1169 TIVVRVTDVNDNLPVFVKDEVSLSIPENTEQRAIHQVVAKDLDTGDNARLSYTI--ISGN 1226

Query: 97   GLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
                F IDP +G  + + K +  E    Y++T++A+D G     T+  V V V   N   
Sbjct: 1227 VGSAFTIDPETG--QLSCKSLDRETVSSYNLTIRASDHGSPQRNTMCRVFVKVLDKNDNY 1284

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            P F    Y   + E   + + V  ++ S +  G
Sbjct: 1285 PQFSALEYAHTIKENVVVGTFVLQVSASDIDEG 1317



 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEAT 76
           ++  + AR++     +  +SLT+++ ++NDN+P       +   +  A  Q  I +++AT
Sbjct: 406 YKLYIEARDQGNPPRTSTLSLTISVLNVNDNSPVFSASSYVFNVSESALVQSNIDQVQAT 465

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           D D      ++YS     +  L+ F I   SG I    +L   E  +Y++TV A D+G  
Sbjct: 466 DRD---GDHVSYSFR--DSMYLNLFGIGSSSGFIYIKQELNREEKDKYTLTVVARDSGKG 520

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
              + V V++ V   N  SPVF+Q+ Y   + E  +  + V   T +   +G
Sbjct: 521 YRSSSVPVTINVLDANDHSPVFKQSFYTFYILENMAAGTIVGQTTATDKDTG 572



 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 20/180 (11%)

Query: 2    LVVSKENLDRD--PPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPP 58
            LV   ENLDR+  P     +   + A +      +  + ++V + D+ND  P   P +  
Sbjct: 1969 LVFLNENLDRELVP----TYSLIIEASDNGNPFKTNTLVVSVEVRDVNDQRPVFQPTMYF 2024

Query: 59   IQIQAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
             ++    A     +++ ATD+D GVNAEI Y+I   ++ GL  F +  R+G +  T    
Sbjct: 2025 KELPENTAHSNSFLQVHATDDDEGVNAEIQYTITSGNDQGL--FIVHGRTGAVSITPNAT 2082

Query: 118  AG----EQYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
                   Q+ + V+ATD  G +S  I   +       V   N   PVF    Y  +V+EG
Sbjct: 2083 LDYETTTQHKLIVRATDCLGCNSTQIRFSAFATIVINVTDVNEYPPVFPVPFYYASVNEG 2142



 Score = 43.5 bits (101), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 13/156 (8%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAG-EARRQIVKIEAT 76
            F   +  R++     S    +++++ DIND+AP        + IQ     +  +++++AT
Sbjct: 1045 FTLTIQVRDQGMPQRSAIKLISIHVLDINDHAPLFSQSSYTVDIQENLPPQSNVLQVQAT 1104

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-- 132
            D D+GVN +++Y  Y     G  KF +D  +G + TT  L   A   Y++T    D G  
Sbjct: 1105 DLDIGVNGKLSY--YLPPGVGGDKFVLDSTTGQLSTTASLDREAQASYTLTAYVRDFGYP 1162

Query: 133  --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
                S+  +V V+ V   N   PVF ++   +++ E
Sbjct: 1163 ERYSSATIVVRVTDV---NDNLPVFVKDEVSLSIPE 1195



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIY-H 92
           +++ V + D+NDN P      P+ I   E       +    ATD D GVN  + YSI   
Sbjct: 844 INVIVEVVDVNDNPPVFEK-DPVLISRKENLPTGYTVHTFTATDKDSGVNGSVRYSIQSQ 902

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD---TGGKSSQTIVEVSVVPG 147
             +  L  F IDP SG ++    L   E  Q S+ +QA D    G +   TI     V  
Sbjct: 903 TPDRAL--FTIDPISGDLKVASVLDYEEVKQVSLVIQAKDQCHAGCQQKATITAWLSVLD 960

Query: 148 PNTRSPVFQQNT 159
            N  +PVF+ N+
Sbjct: 961 VNDNTPVFKGNS 972



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEARRQIV------KIEATDNDLGVNAEITYSIYHVS 94
            V + D NDN P+   +      A   +  +V      ++ A+D D G NA ITYS+ + +
Sbjct: 1275 VKVLDKNDNYPQFSALE----YAHTIKENVVVGTFVLQVSASDIDEGENAHITYSLGNDT 1330

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS-SQTIVEVSV-VPGPNT 150
            + GL  F++D +SG I T G     ++  Y   V A D G K      V+V + +   N 
Sbjct: 1331 D-GL--FQVDSQSGNITTNGLFDYEKKTSYVFFVVAKDGGQKDIKNKTVQVRINLSDVND 1387

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             +PVF +  Y  N+S   + ++ V  +      SG
Sbjct: 1388 NAPVFTEMAYHKNLSVNTASDTLVVRVKADDRDSG 1422



 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 14/193 (7%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           LV + E LD +  N  ++   VIA++    A S   SL V++ D ND  P       + I
Sbjct: 705 LVTTLEVLDFEQKN--RYALGVIAKDHGNPARSSSSSLVVHVKDENDGRPIFSS-QNLTI 761

Query: 62  QAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
           Q  E  +    + K+EA D D G N  ++YSI  +       F ++  +G I     +  
Sbjct: 762 QVVENIKTGSIVGKVEAKDWDSGENGRVSYSI--IGGNVFDVFAVNVSNGNIYCIRNVDY 819

Query: 119 GE--QYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
            E   +S+ V+A D      KSS   V V VV   N   PVF+++   ++  E      T
Sbjct: 820 EEASSHSLAVKAVDNSPYNPKSSTINVIVEVV-DVNDNPPVFEKDPVLISRKENLPTGYT 878

Query: 174 VATITVSRLASGC 186
           V T T +   SG 
Sbjct: 879 VHTFTATDKDSGV 891



 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 23/161 (14%)

Query: 31   TAASVPVSLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIVKIEATDNDLGVNA 84
            T  S    L VN+ D NDN P          IP      G   + I+ + ATD D G+N+
Sbjct: 1788 TKHSAQTILEVNVEDENDNHPVFSQQSYQADIPEF---TGSGVK-ILTVTATDADSGINS 1843

Query: 85   EITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGK---SSQTI 139
             +TY++  V+ TG   F IDP +G + T  T +L   +Q    V     GG+   S+   
Sbjct: 1844 VLTYNLI-VNPTG--GFYIDPNTGELFTNKTVELRQDQQVITLVVTAQDGGRPRLSAVVA 1900

Query: 140  VEVSVVPGPNTRSPVF--QQNTYDV--NVSEGASINSTVAT 176
            + + V+P  N  +P F  QQ+ +    ++ +G ++ S  AT
Sbjct: 1901 INLQVIP-VNHYAPEFPPQQSKFIFAEDIKKGENLWSVTAT 1940


>gi|327270413|ref|XP_003219984.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
          Length = 830

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           +++ VN+ DINDNAP     I  + ++        +++++A+D+D G NAEITY+   ++
Sbjct: 228 LNIRVNVTDINDNAPVFSQAIYKVSLKENAPIGMSVLQVKASDSDEGSNAEITYTFSDIA 287

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
             G  KF +DP+ G I T  + I  E   +Y + +QA+D GG  +   VE+ V+
Sbjct: 288 EKGEQKFTLDPKDGKI-TLLENIDFENRKKYVMIIQASDGGGLVAHCKVEIEVL 340



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 15/183 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           + +++  +LDR+     ++   +IA +K     S   ++++ ++DINDN P    P    
Sbjct: 404 FKLLTDGSLDRE--RVPEYNITIIAMDKGTPPLSTHKTISIMISDINDNPPAFEKPSFTA 461

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGK 115
             ++   A   +  ++A+D DL  NA+ITYS    S   L       I+  +G I +   
Sbjct: 462 YILENNPAGVSVFHVKASDPDLDRNAQITYSFLSTSIEDLPLSSYISINSETGTIYSQRS 521

Query: 116 LIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
               +  ++ I V+  D G    SS   V V ++   N  SP   Q  Y     EG+S+ 
Sbjct: 522 FDYEQLREFQIEVKVQDGGSPPLSSSATVTVCIL-DRNDNSP---QILYPSQTPEGSSVF 577

Query: 172 STV 174
             V
Sbjct: 578 EMV 580


>gi|327270375|ref|XP_003219965.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
          Length = 821

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 22/195 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIARE-----KQGTAASVPVSLTVNLNDINDNAPRLPMI 56
           LV++K+ LDR+  +   F   ++A +     K GTA      + +N+ D NDN+P    +
Sbjct: 193 LVLNKQ-LDRE--SKSSFHLTLMALDGGKPPKTGTA-----KIWINIIDANDNSPVFSQV 244

Query: 57  PPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
              ++   E   +   +V+++ATD D G NA+I Y+  ++      KF +D + G I T 
Sbjct: 245 L-YRVNLKENAPSGSLVVQVKATDKDAGSNAQINYNFKNIPERARQKFDLDSQDGKI-TV 302

Query: 114 GKLI---AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
            +L+     E+Y +TV+A D GG ++ T +E++++   N  +P     +    + E +++
Sbjct: 303 KELLDFEKTEKYVMTVEARDGGGLAAHTNIEITLI-DENDNAPEVILASLSSPIPEDSAL 361

Query: 171 NSTVATITVSRLASG 185
            + VA I +    SG
Sbjct: 362 GTLVALINIKDRDSG 376



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 27/164 (16%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI----------EATDNDLGVNAEITY 88
           + V + D+NDNAP            G+ + +I++           +A D D+GVNA   Y
Sbjct: 118 IIVEVQDVNDNAPHF--------LNGDIKLEIIESTLPGATFPLEQAEDPDIGVNALHDY 169

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQT---IVE 141
           ++    Y   +   H+        V+       +   + +T+ A D GGK  +T    + 
Sbjct: 170 NLNINQYFALDITEHQPGKKYVQLVLNKQLDRESKSSFHLTLMALD-GGKPPKTGTAKIW 228

Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
           ++++   N  SPVF Q  Y VN+ E A   S V  +  +   +G
Sbjct: 229 INIIDA-NDNSPVFSQVLYRVNLKENAPSGSLVVQVKATDKDAG 271


>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos
           saltator]
          Length = 3166

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 80/181 (44%), Gaps = 21/181 (11%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           V ++  LDR+  N     F+V+A +      +   +L VN+ D ND+AP     P     
Sbjct: 318 VTTRARLDRE--NVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDANDHAPSFEW-PEYDAS 374

Query: 63  AGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHK-----FRIDPRSGVIET 112
             E       +V ++ATD D G NAE+ YSI   +  G   H      FRIDPRSGV+ T
Sbjct: 375 VREGVPVGSTVVTVKATDQDTGRNAEVEYSIVCTTAGGSTAHSEEAAIFRIDPRSGVV-T 433

Query: 113 TGKLIAGEQ-------YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVS 165
           T   +  EQ        S+T QAT    + S     V  V   N   P F + TY   V 
Sbjct: 434 TRTALDREQTEVYTVLLSVTDQATPPSARRSANATLVVRVLDDNDNYPQFTERTYSAAVL 493

Query: 166 E 166
           E
Sbjct: 494 E 494



 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 14/187 (7%)

Query: 2   LVVSKENLDRDPPNP-GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
            + + + LDR+  +   K++F +IA +    A S+  ++ + + D+NDN    P   P  
Sbjct: 652 WIYTTKQLDREQCSKYSKYQFTIIAADSGEEAKSMSATVILTVTDVNDND---PYFEPKN 708

Query: 61  IQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
            +A  +        +  + ATD D   +A I Y I   +  G          G+I     
Sbjct: 709 YEAVVSEDDPPGTPVTSVTATDPD--EDARIHYEITGGNTRGRFSIASQNGRGLITVAQP 766

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
           L   ++  + +TV A+D+GG++   +V V+V    N  SPVF+   Y V+V E A +  T
Sbjct: 767 LDYKQEKRFVLTVTASDSGGRTDTALVYVNVSDA-NNFSPVFENAPYSVSVFEDAPVGVT 825

Query: 174 VATITVS 180
           V  ++ +
Sbjct: 826 VLVVSAT 832



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
            +   V AR+      S    + +++ D+NDNAP     P  Q    E       ++++ A
Sbjct: 881  YLLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEA-PQYQGSIPEDVLVGTSVLRVAA 939

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D  +N  + Y++    + G   F IDP +G++ T   L   +  +YS+   A D G 
Sbjct: 940  TDADSDLNGRVKYAL---EDDGDGAFAIDPTTGIVRTAKSLDRESVARYSLKAVAIDRGS 996

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             +  ++V + + +   N   P F+ +   + ++E + + STV  I
Sbjct: 997  PALSSVVPMIIKIEDINDSPPAFENDKIVLYIAENSPVGSTVGEI 1041



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 28/179 (15%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---------PIQIQAGEARR 68
           +F   V A +  G   +  V   VN++D N+ +P     P         P+ +       
Sbjct: 774 RFVLTVTASDSGGRTDTALV--YVNVSDANNFSPVFENAPYSVSVFEDAPVGVT------ 825

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTG---LHKFRIDPRSGVIETTGKLIAG--EQYS 123
            ++ + ATD+D+G NA+ITYS+   +++G   +++F I+ ++G I TT  L       Y 
Sbjct: 826 -VLVVSATDSDVGKNAQITYSL--ATDSGEQAVNEFSINSQTGAITTTRALDRELVSSYL 882

Query: 124 ITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           +TV A D G    S  T VE+SV    N  +PVF+   Y  ++ E   + ++V  +  +
Sbjct: 883 LTVTARDGGVPPLSDTTDVEISVT-DVNDNAPVFEAPQYQGSIPEDVLVGTSVLRVAAT 940



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 20/175 (11%)

Query: 21  FQVIAREKQGT--AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           ++++ R + G   A S    L V + D+NDNAPR       Q    E       +++++A
Sbjct: 556 YKIVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRF-YTSHFQESVSENVPLGYSVLRVQA 614

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLIAGE-----QYSITV 126
            D D G NA I Y+I     TG         ++  +G I TT +L   +     +Y  T+
Sbjct: 615 YDADEGKNALIRYTIGARDVTGAFTENFPITVNTETGWIYTTKQLDREQCSKYSKYQFTI 674

Query: 127 QATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVAT 176
            A D+G ++ S +   +  V   N   P F+   Y+  VSE    G  + S  AT
Sbjct: 675 IAADSGEEAKSMSATVILTVTDVNDNDPYFEPKNYEAVVSEDDPPGTPVTSVTAT 729



 Score = 36.2 bits (82), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
           + +I ATD D G NA + Y+I  +     + F ID  SG +     L   +   Y I ++
Sbjct: 504 VARIRATDADAGSNAAVRYAI--IGGNTQNTFSIDSMSGDVALVKPLDYESTRSYKIVIR 561

Query: 128 ATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           A D G  + S T   + +V   N  +P F  + +  +VSE   +  +V  +
Sbjct: 562 AQDGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVSENVPLGYSVLRV 612


>gi|291407998|ref|XP_002720204.1| PREDICTED: protocadherin 11 X-linked isoform 5 [Oryctolagus
           cuniculus]
          Length = 1320

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 39  LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
           L V + D NDNAP     P I I   E      Q+ KI ATD D G NAEI Y +     
Sbjct: 452 LLVKVKDENDNAPVFTQ-PFISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GT 507

Query: 96  TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
               +F +D R+G++    KL     E+Y  TV A D G     T   V V V   N  S
Sbjct: 508 DAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNS 567

Query: 153 PVFQQNTYDVNVSEGASINSTVATITVS 180
           P+F  N Y+  V E    + TV  ITV+
Sbjct: 568 PIFTHNEYNFYVPENLPRHGTVGLITVT 595



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 4   VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----- 58
           V + N+  D      + F V A +    + S    +T+N+ D+NDN P   +IPP     
Sbjct: 624 VIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF-VIPPSNYSY 682

Query: 59  -IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
            + + +      + ++ A DND G+NAEI YSI   +  GL  F ID  SG I    K +
Sbjct: 683 ELVLPSTNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGL--FIIDQTSGNITLKEKCV 740

Query: 118 AGE--QYSITVQATDTGGKSS 136
             +   + + V+A D G   S
Sbjct: 741 VADLGLHRLVVKAKDLGQPDS 761



 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 23/194 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           L+V KE LDR+  +   +  +V   +      S    L V++ D NDN P          
Sbjct: 201 LIVQKE-LDREEKD--TYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTG 114
           IP    +       + ++ ATD D+G NA+I +   + VSN     F ++  +G+I    
Sbjct: 258 IP----ENAPVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKE 313

Query: 115 KLIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSE 166
            L   E   + + V ATD G   ++ +V V+V      VP  + R  +       V +SE
Sbjct: 314 PLDREEAPSHKLLVLATDGGSMPARAMVLVNVTDINDNVPSIDIRY-IINPTNGTVVLSE 372

Query: 167 GASINSTVATITVS 180
            A +N+ VA ITV+
Sbjct: 373 NAPLNTKVALITVT 386



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           ++ + + LDR+     K+ F V+A++          ++ V + D NDN+P          
Sbjct: 521 ILTAVKKLDRE--KQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFY 578

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
           +P    + G     +  I  TD D G N+ +T SI  V++    +F IDP++GVI     
Sbjct: 579 VPENLPRHG----TVGLITVTDPDYGENSAVTLSIVDVND----EFTIDPQTGVIRPNIS 630

Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
               +Q  Y+  V+A D G  S  +  +V++ V   N   PVF
Sbjct: 631 FDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVF 673



 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)

Query: 37  VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVS 94
           V +   + DINDNAP  P  +  I I    A      +  A D D+G+N    Y +    
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAVDPDIGINGVQNYQLIK-- 180

Query: 95  NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
             G + F +D    VIET       +LI  ++        Y + V+  D G   +SS  I
Sbjct: 181 --GQNIFGLD----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAI 234

Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++VSV    N   PVF++N  +V++ E A + ++V  +
Sbjct: 235 LQVSVA-DTNDNRPVFKENEIEVSIPENAPVGTSVTQL 271


>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
          Length = 4981

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP   ++    P+   ++ G    +
Sbjct: 2945 NINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKIKYFTPVTKNVKVG---TK 3001

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y I + ++ G  KF++D  +G I     LI+   + + ITV
Sbjct: 3002 LIKVTAIDDKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFFITV 3059

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V+++V    N  +P F Q+     + E   I S V T++
Sbjct: 3060 TAKDKGNPPLSSQATVQITVTE-ENYHTPEFSQSHMSATIPESHGIGSIVRTVS 3112



 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
           +LDR+  +   +   V+A +      S    + V+L DINDN+P   +  P+Q  A    
Sbjct: 646 SLDRE--DQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700

Query: 68  RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
            +     I  + ATD DLG N  + YSI   S     +F+++ +SGVI T   L   E+ 
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757

Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y + + ATD G   S  Q IV ++V+   +   PVF Q  Y   V E  ++   V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816

Query: 179 VSRL 182
            S +
Sbjct: 817 ASTM 820



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            F F VIA + QG    +    TV+  + DINDNAP+  +    Q    E+     Q++++
Sbjct: 1175 FTFTVIATD-QGLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             A+D D G N  I YSI  +      +F ID  SG +   GKL   A   YS+ ++A D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDSTSGQVALIGKLDYEATPTYSLVIEAVDS 1290

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            G  S  +   +++ +   N  +P F + T  V+V E   I   V+++T +   SG
Sbjct: 1291 GTISLNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRIGELVSSVTATDSDSG 1345



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEAT 76
            ++ +V+A     T  +V   + + + D+NDN+P  L  I  + + +  +A   I + +A 
Sbjct: 862  YQLKVVASGGTVTGDTV---VNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAV 918

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQATDTG-GK 134
            D D GVN  + YS+        + F I+ ++G I   G L +    Y I + A+D G  +
Sbjct: 919  DPDEGVNGMVLYSL---KQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQ 975

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S +++    V   N  SPVF Q +Y+V +SE   +NS    +  S   SG
Sbjct: 976  LSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 20/191 (10%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
            +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND+ P+         I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850

Query: 57   PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
            P   I        +  I ATD+D G N EITY +      G+  F ++P +GV   T  L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGANGEITYIVNEDDEDGI--FFLNPITGVFNLTRVL 1904

Query: 117  IAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
                Q  Y +TV+A D GG+ +   V  +++   N   P+F  N+Y  ++ E   + STV
Sbjct: 1905 DYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DINDNPPIFSLNSYSTSLMENLPVGSTV 1963

Query: 175  ATITVSRLASG 185
                V+    G
Sbjct: 1964 LVFNVTDADDG 1974



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEA 75
            K    + A +    A +   S+TVN+ D+NDN+P        P  ++   +   ++ + A
Sbjct: 3159 KHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNA 3218

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            TD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A +   
Sbjct: 3219 TDADSGTNAVIAYTV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPD 3275

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            +   +   V+V + G N   P F    Y   +SE A   + V  +  S
Sbjct: 3276 EERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFAS 3323



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 41   VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +TY+I   ++  
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
               FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ V   N  +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841

Query: 156  QQNTYDVNVSEGASINSTVATITVSRLASG 185
             +  Y  ++ E     S VA I  +   SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 24  IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
           I+   QG    V  + L V L D+ND  P         +   E      +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFNQPEGYDVSVVENAPTGTELLVLRATDGD 611

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
           LG N  + +S+   + T    FR+DP SG + T   L   +Q  YS+ V ATD G   +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREDQAFYSLLVLATDMGSPPQS 670

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           S   + VS++   N  SPVF    Y  ++ E     S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
            LDR+      +   V+A +K     S    + V + DINDN P     +  ++I      
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPPLSSSAEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169

Query: 68   -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
               I+++ A D D G N ++ Y I  V+     +FRID  +G I T  K +  E+   Y 
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYL 2226

Query: 124  ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            +TVQATD G    +    VS+ +   N   P+F+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRKDTSTVSIALLDINDFVPIFELSPYSVNVPE 2270



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +VSK  LDR+   P +++  V   +K        + + V + DINDN P   +      Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256

Query: 63  AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           AG     +V     ++ A D D G NA+I Y +          F++DP +G+I     L 
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312

Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
             A  QYS+TVQA D G     G++   I  + V    N   PV     F   +   +V 
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368

Query: 166 EGASINSTVATITVSRLASGCA 187
           E A + + VA +TV+   S  A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 9/149 (6%)

Query: 38   SLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            S+ V + D+NDN PR    P +  I +       V  +  TD D+G N+E+ YS+   S 
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTVPGSFVFAVTVTDADIGPNSELHYSL---SG 2507

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
                KF IDP  G I   G L    + + +V   D G   K+  T V V  V   +    
Sbjct: 2508 RNSEKFHIDPLRGAIMAAGPLNGAAEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADFPKV 2567

Query: 154  VFQQNTYDVNVSEGASINSTVATITVSRL 182
              ++ T+     E   ++S V TIT S +
Sbjct: 2568 RAKEQTF--MFPESQPVSSLVTTITGSSM 2594



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            K+   + AR+      S    L + + D+NDNAP     P + +I    + R+++ + A 
Sbjct: 2634 KYVIWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKVLTVSAM 2693

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N ++ Y I  V+    + F I+  +G I +   L   +   Y +T++++D G  
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFTINHATGEIRSIRPLDREKISHYVLTIKSSDKGSP 2751

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S    V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 2752 SQSASVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 32  AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
           A S   SL + +NDIND+ P               PP    +G        + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------VSATDGDSG 505

Query: 82  VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
           +NA + YSI  VS  GL  F I   SG++ T   G L      Q  + + A D G     
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARDQGVHPKV 563

Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
           +  ++ V +   N   PVF Q   YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFNQPEGYDVSVVENA 596



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 17   GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
            G ++ +++A +      S  V LTV ++D+NDN+P    +   ++   E+     +  K+
Sbjct: 960  GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
            +A+D D G N EI Y+I    NTG   F I P   + I++       ++Y + V A+D  
Sbjct: 1019 QASDKDSGANGEIAYAIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076

Query: 133  GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             +     V V+V+    N   P+F    Y     E     S V  ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+      +   + + +K   + S  V + +N+ D NDNAPR   I    + +     
Sbjct: 2731 LDRE--KISHYVLTIKSSDKGSPSQSASVKVMINILDENDNAPRFSQIFSAHVPENSPLG 2788

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+G+NA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 2789 YTVTRVTTSDEDIGINAISRYSIMDTS----LPFTINPSTGDIIISRPLNREDTDRYRIR 2844

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E     S V  ++ +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELTETGSKVTQVSAT 2897



 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
            K  LDR+  +  ++   V+A ++     S  V++TV L D+NDN P             E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112

Query: 66   ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
             R    + K+ A D D G N E+ YS         ++ +S   T  H+F    R  ++  
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRR 1169

Query: 113  TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
             G  +    ++ TV ATD G       Q  V V  +   N  +P F ++ Y   +SE A+
Sbjct: 1170 RGTAV----FTFTVIATDQGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224

Query: 170  INSTVATITVSRLASG 185
              + V  ++ S +  G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240



 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 19/171 (11%)

Query: 31  TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
           +A + P  + V + D+NDNAP  P  P I +   E   + RQ++   ATD+D+G N    
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171

Query: 86  ITYSIYHVSNTGLHKFRIDPR---SGVIETTGKLIAG-------EQYSITVQATDTGGKS 135
            +Y I   +  G  +FR+D     SG       +  G        QY + V+  D G   
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +  ++V+V V   N   PVF  + Y   V E A + S+V  +  +    G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280



 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
            +T+ + D+NDN   +PM       A +    I      I A D D G N E+ Y I    
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEII--- 1568

Query: 95   NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
            N     F +D  SG +     L+  +  Y++ V ATD G +  ++  E++V+       P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627

Query: 154  VFQQNTYDVNVSEGASINSTVATI 177
            VF Q  Y   + EG  I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 38   SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
            ++ V L   N+  PR    +   +I     +  +V ++ A+D DLG + E+ Y I+   N
Sbjct: 3283 TVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFASDRDLGTDGEVHYLIF--GN 3340

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
            +    F+I+ ++G I  +G L     E+ S+ V A + G      I EV+V   V   N 
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATIT 178
              PVF  + Y V +SEG  I + V  ++
Sbjct: 3401 -PPVFTLSIYSVQISEGVPIGTHVTFVS 3427



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPI-----QIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
             +L +++ D NDN P  P           ++ GE    +  + ATD+D G NA++ YSI 
Sbjct: 1299 CTLNIDILDENDNTPSFPKTTLFVDVLENMRIGEL---VSSVTATDSDSGDNADLHYSIT 1355

Query: 92   HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGP 148
              +N G   F I P +G I    KL    Q  Y + + A D G     + + V + V   
Sbjct: 1356 GTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDF 1413

Query: 149  NTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            N   P F       ++ E   I ++V ++T
Sbjct: 1414 NDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443



 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEARRQIV 71
            ++  + A+++     S  +S+ +++ D NDN P  P       ++  I I        ++
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT-----SVI 1440

Query: 72   KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
             + A D D  +N +++Y+I      G H F ID   G I T  ++       + +TV+A 
Sbjct: 1441 SVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTVKAN 1499

Query: 130  D 130
            D
Sbjct: 1500 D 1500


>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 2750

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 12/170 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKI 73
           +R  V  ++    + S    L VN+ DINDN P+          P  +  G +   IV++
Sbjct: 505 YRLVVRVQDGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPENVPVGHS---IVRV 561

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ--ATDT 131
           +A D D G NAEI+Y++       L    +D  +G + TT +L   E  S   Q  A D 
Sbjct: 562 QAYDADDGANAEISYTLSSSERPDL-PLNVDDVTGWVSTTRQLDREESASFNFQVVARDH 620

Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           G  S      + + V   N   PVF+  TY+  VSE     + V ++T S
Sbjct: 621 GTPSRSATASILLRVQDVNDNDPVFEPRTYEATVSEADPPGTPVVSVTAS 670



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 25  AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATD 77
           A +   TA S   +L VN+ D ND+AP        Q     + R+       ++ + ATD
Sbjct: 299 ATQPPSTATS---TLQVNVLDENDHAPTFE-----QATYEASIRESVPTGFTVLTVRATD 350

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG-- 133
            D G NA + YSI +   T    F ID +SG+I T   L       Y++ VQATD+G   
Sbjct: 351 QDTGSNANVDYSILNPDGTN-GAFGIDSKSGIITTRSSLDRELTSFYALVVQATDSGPVT 409

Query: 134 --KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             KS+   V+++V+   N   P F + +Y V VSE
Sbjct: 410 DRKSASATVQITVL-DENDNYPQFSERSYSVKVSE 443



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVK 72
           +F   V A +  G + S  V L  N++D N + P     P     P  +  G     ++ 
Sbjct: 715 RFVLVVTATDSGGRSDSATVYL--NVSDANTHRPTFERTPYTASIPEDVPVGTT---VLV 769

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSITVQA 128
           +EA D D+G NA +TY++       + +FR+DP SG + T   L    + G  Y++ V A
Sbjct: 770 VEARDGDVGRNALVTYTL----EEDVPEFRMDPSSGSLVTARPLDRERVGG--YTLVVAA 823

Query: 129 TDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            D G    S  T VE+ +    N  +PVF    Y   VSE A + ++VA ++
Sbjct: 824 QDGGNPPLSDTTNVELEIA-DVNDNTPVFPTAGYTSTVSEDALVGTSVAHVS 874



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 13/181 (7%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI 61
           V +   LDR+      F FQV+AR+    + S   S+ + + D+NDN P   P      +
Sbjct: 597 VSTTRQLDRE--ESASFNFQVVARDHGTPSRSATASILLRVQDVNDNDPVFEPRTYEATV 654

Query: 62  -QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI--DPRSGVIETTGKL-- 116
            +A      +V + A+D D   ++ + Y I   S     +F I    R  V+     L  
Sbjct: 655 SEADPPGTPVVSVTASDRD--EHSRLVYQI--ASGNTRERFGIVSHNRQAVVSVAQPLDY 710

Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
               ++ + V ATD+GG+S    V ++ V   NT  P F++  Y  ++ E   + +TV  
Sbjct: 711 KLERRFVLVVTATDSGGRSDSATVYLN-VSDANTHRPTFERTPYTASIPEDVPVGTTVLV 769

Query: 177 I 177
           +
Sbjct: 770 V 770



 Score = 41.6 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 7/127 (5%)

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAG--EQ 121
           E R +   +E       V+ +++YS++ V +      F IDP SGV+ TT  L     E 
Sbjct: 229 EGRDRGYVVETLSATSAVSGDLSYSLHAVLDARSQAMFSIDPLSGVVTTTTVLDREFIEV 288

Query: 122 YSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           + + V A D   +   ++ + ++V+V+   N  +P F+Q TY+ ++ E      TV T+ 
Sbjct: 289 HYLRVVAVDGATQPPSTATSTLQVNVL-DENDHAPTFEQATYEASIRESVPTGFTVLTVR 347

Query: 179 VSRLASG 185
            +   +G
Sbjct: 348 ATDQDTG 354



 Score = 40.0 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V+   LDR+    G +   V A++      S   ++ + + D+NDN P  P        
Sbjct: 803 LVTARPLDRE--RVGGYTLVVAAQDGGNPPLSDTTNVELEIADVNDNTPVFPTAGYTSTV 860

Query: 63  AGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           + +A     +  + A D DLG+N +I Y+ +   N G   F IDP SG++ T   L
Sbjct: 861 SEDALVGTSVAHVSALDADLGLNGQIRYT-FLGGNDGGGAFGIDPTSGIVRTNRAL 915



 Score = 38.1 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++ ++ +LDR+  +      Q           S   ++ + + D NDN P+        +
Sbjct: 381 IITTRSSLDRELTSFYALVVQATDSGPVTDRKSASATVQITVLDENDNYPQFSE-RSYSV 439

Query: 62  QAGE-----ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           +  E        ++ +I ATD+D G NA + YS+   +  G   F +D  +G +     L
Sbjct: 440 KVSEDVNWLNHPEVARIRATDSDQGANAALRYSLIGGNTQG--HFAMDSLTGSVTVLSPL 497

Query: 117 I--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
              +   Y + V+  D G  S     ++ V V   N   P F  + +   V E   +  +
Sbjct: 498 DYESARSYRLVVRVQDGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPENVPVGHS 557

Query: 174 VATI 177
           +  +
Sbjct: 558 IVRV 561


>gi|301753557|ref|XP_002912655.1| PREDICTED: protocadherin alpha-13-like [Ailuropoda melanoleuca]
          Length = 875

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 12/158 (7%)

Query: 37  VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-V 93
           V L + + D+NDNAP     +     ++       ++K+ ATD D G N +I YS    V
Sbjct: 226 VQLLITILDVNDNAPEFDQYIYKVTVLENAFNGTLVIKLNATDLDDGTNGDIIYSFRRPV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG----GKSSQTIVEVSVVPG 147
           S   LH F I+P +G I T GKL   E+  Y I+V+A D G          +VE+  +  
Sbjct: 286 SPAVLHAFIINPNNGEIRTRGKLDFEEKKLYEISVEAIDKGNIPMAGHCTILVEILDI-- 343

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P     +  + V E A + + +A I+VS   SG
Sbjct: 344 -NDNTPEITITSLSLPVREDAQVGTVIALISVSDRDSG 380



 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 27/162 (16%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
           V + DINDN P  P          E++R+IV  E            A+D D+GVN+ +TY
Sbjct: 121 VEVKDINDNPPVFP----------ESKRRIVIAESRPPETRFPLDGASDADIGVNSALTY 170

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            I    Y V +T  ++ +    S V+  +      +++S+ + A D G       V++ +
Sbjct: 171 RIDPNEYFVLDTRNNREQTSSLSLVLRKSLDREQIQEHSLLLTANDGGKPELTGTVQLLI 230

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +   N  +P F Q  Y V V E A   + V  +  + L  G
Sbjct: 231 TILDVNDNAPEFDQYIYKVTVLENAFNGTLVIKLNATDLDDG 272



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 7/135 (5%)

Query: 37  VSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-H 92
            ++ V + DINDN P + +     P++  A +    I  I  +D D G N ++T S+  H
Sbjct: 334 CTILVEILDINDNTPEITITSLSLPVREDA-QVGTVIALISVSDRDSGANGQVTCSLIPH 392

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
           V    +  F+ +  S V+++     + E Y + V A D G  S      VSV V   N  
Sbjct: 393 VPFKLVSTFK-NYYSLVLDSALDRESVENYVLVVTARDGGSPSLSATASVSVEVADVNDN 451

Query: 152 SPVFQQNTYDVNVSE 166
           +P F Q  Y V V E
Sbjct: 452 APAFAQPEYTVFVKE 466



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+         V+L V + D NDNAP L  + P    AG A  ++V       
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPLRPGAGGAGGALSELVSRSVGAG 590

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 591 HVVAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVALYTGEISTTRSL 639


>gi|432106747|gb|ELK32399.1| Cadherin-23 [Myotis davidii]
          Length = 1729

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 11/157 (7%)

Query: 38  SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
           ++ VN+NDINDN P  P     P  +  G+   ++    A D D G N ++ YSI  V  
Sbjct: 150 TVLVNVNDINDNVPTFPRDYEGPFDVTEGQPGPRVWTFLAHDRDSGPNGQVEYSI--VDG 207

Query: 96  TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTG--GKSSQTIVEVSVVPGPN 149
             L +F I P  GV+     +    +    Y++T+ A D G    SS  +V + V+   N
Sbjct: 208 DPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVL-DIN 266

Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
              PV      +V +SE + ++S VA I  S   SGC
Sbjct: 267 DNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGC 303



 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 30/173 (17%)

Query: 32  AASVP-VSLTVNLNDINDNAPRLPMIPPIQI--------QAGEARRQIVKIEATDNDLGV 82
           A SVP   LTVN+ D+NDN PR     P  I        +       ++ + A D D G+
Sbjct: 692 AVSVPNAKLTVNILDVNDNTPRFK---PFGITYYTEKVLEGATPGTTLIAVSAVDPDKGL 748

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
           N  ITYS+  +   G  +           + GK+IA            + TV+A+D G  
Sbjct: 749 NGLITYSLLDLMPPGYVQLED-------SSAGKVIANRTVDYEEVHWLNFTVRASDNGSP 801

Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            ++++  V + +V   N  +P+F + +Y   V E   + + + T+T S   SG
Sbjct: 802 PRAAEIPVYLEIV-DINDNNPIFDEPSYQEAVYEDVPVGTVILTVTASDADSG 853



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 9/123 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAG-EARRQIVK 72
            +F   V+A +           L V + D+NDN P   + PP    + I+     R  + +
Sbjct: 953  RFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVF-VRPPNGTIVHIKEEVPLRSNVYE 1011

Query: 73   IEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
            + ATD D G+N  + YS    + N     F IDP SG+I+T  +L   +Q  YS+ + A+
Sbjct: 1012 VYATDQDEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAMYSLILVAS 1071

Query: 130  DTG 132
            D G
Sbjct: 1072 DLG 1074



 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 9   LDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QA 63
           +DR+  +P      ++A +     GTA      L V + D NDN P   P    I + + 
Sbjct: 448 IDREAFSPPVLELLLLAEDIGLLNGTA-----DLIVTILDDNDNWPTFSPAALTIHLLEN 502

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
                 ++++ ATD D G+N E+   +Y +      +F I P +GVI      I  E+  
Sbjct: 503 CPPGFSVLQVTATDEDSGLNGEL---VYRIEAGAQDRFLIHPVTGVIRVGNVTIDREEQE 559

Query: 122 -YSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
            Y +TV A+D G    S T +   ++   N   P F    + V V E A   + +A +T
Sbjct: 560 SYRLTVVASDRGTVPLSGTAIITILIDDINDCRPEFINPIHTVTVLESAEPGTVIANVT 618



 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 79   DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GK 134
            D G N E+TYS+      G   F +D  SG++ T   L + E++++TV ATD G      
Sbjct: 916  DEGSNGEVTYSL-----EGPEAFHVDMDSGLVTTKRPLHSYERFNLTVVATDGGEPPLWG 970

Query: 135  SSQTIVEVSVVPGPNTRSPVFQQ--NTYDVNVSEGASINSTVATI 177
            ++  +VEV  V   N   PVF +  N   V++ E   + S V  +
Sbjct: 971  TTMLLVEVIDV---NDNRPVFVRPPNGTIVHIKEEVPLRSNVYEV 1012


>gi|431892571|gb|ELK03004.1| Protocadherin alpha-2 [Pteropus alecto]
          Length = 824

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 8/189 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           +V K++LDR+      F   ++A +      +  V L + + D+NDN P     +  +Q+
Sbjct: 194 LVLKKSLDRE--EISGFNLLLVATDGGKPELTGTVQLLIKVLDVNDNEPTFDQSVYKVQL 251

Query: 62  QAGEARRQIV-KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               A   +V ++ +TD D G N+EI YS    V +T   KF+IDP +G I T G L   
Sbjct: 252 LENAANGTLVIRLNSTDADEGSNSEIVYSFSSDVPSTIKTKFKIDPSTGDIRTKGHLDYE 311

Query: 120 E--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           E   Y I V A D G  S     ++SV +   N  +P     +  + + E A + + +A 
Sbjct: 312 ETKSYEIQVIAYDNGTPSMSGHCKISVKLVDINDNTPEVSITSLSLPIREDAPLGTVIAL 371

Query: 177 ITVSRLASG 185
           I VS   SG
Sbjct: 372 IMVSDRDSG 380



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 5/152 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QVIA +    + S    ++V L DINDN P + +     PI+  A      I  I  
Sbjct: 316 YEIQVIAYDNGTPSMSGHCKISVKLVDINDNTPEVSITSLSLPIREDA-PLGTVIALIMV 374

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
           +D D G N ++T ++   +   L     +  S V+++T    +   Y + V A D G  S
Sbjct: 375 SDRDSGDNGQVTCTMTPNAPFKLVSTFKNYYSLVLDSTLDRESVANYELVVTARDGGSPS 434

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                 V+V V   N  +P F Q  Y V V E
Sbjct: 435 LSATASVTVEVADVNDNAPEFAQPEYTVFVKE 466



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 21/143 (14%)

Query: 41  VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN P  P+ +  I+    +       +E ATD D+GVNA ++Y +   S++  
Sbjct: 121 VEVKDINDNPPMFPVAVKTIRFHESKPLDSRFPLEGATDADIGVNALLSYKL---SSSEF 177

Query: 99  HKFRIDPRSGVIETTGKLIAGEQ-------YSITVQATDTGGK-----SSQTIVEVSVVP 146
               I     + ++   ++           +++ + ATD GGK     + Q +++V  V 
Sbjct: 178 FFLDIQTNDDLSQSLSLVLKKSLDREEISGFNLLLVATD-GGKPELTGTVQLLIKVLDV- 235

Query: 147 GPNTRSPVFQQNTYDVNVSEGAS 169
             N   P F Q+ Y V + E A+
Sbjct: 236 --NDNEPTFDQSVYKVQLLENAA 256



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 22/117 (18%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-------------------I 59
            +FQV AR+         V+L V + D NDNAP L  +PP                   +
Sbjct: 531 LQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL--LPPGSGRLPPGAGSGGGVVSQPV 588

Query: 60  QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               G A   + K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 589 ARSVG-AGHVVAKVRAVDADSGYNAWLSYELRPEAGGAHSPFRVGLYTGEISTTRAL 644


>gi|384475939|ref|NP_001245115.1| protocadherin-9 precursor [Macaca mulatta]
 gi|355701025|gb|EHH29046.1| Protocadherin-9 [Macaca mulatta]
 gi|355754726|gb|EHH58627.1| Protocadherin-9 [Macaca fascicularis]
 gi|380783509|gb|AFE63630.1| protocadherin-9 isoform 1 precursor [Macaca mulatta]
          Length = 1237

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPVFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|14388339|dbj|BAB60731.1| hypothetical protein [Macaca fascicularis]
          Length = 1032

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPVFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLP------M 55
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTG 114
           IP    +       ++++ ATD D+G NAEI Y     V+      F ++  +G+I    
Sbjct: 261 IP----ENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQR 316

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSE 166
            L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE
Sbjct: 317 SLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSE 375

Query: 167 GASINSTVATITVS 180
              +N+ +A ITVS
Sbjct: 376 KDPVNTKIALITVS 389


>gi|340374587|ref|XP_003385819.1| PREDICTED: hypothetical protein LOC100641168 [Amphimedon
            queenslandica]
          Length = 7953

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 18/182 (9%)

Query: 19   FRFQVIAREKQGT---AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----ARRQIV 71
              F V A +  G+   ++S PVS+ V   DINDNAP   + P  Q+   E     +  + 
Sbjct: 6061 LSFNVTAEDSYGSVVQSSSAPVSIVVI--DINDNAPLFDL-PFYQLNVSEDTPVGQSLLT 6117

Query: 72   KIEATDNDLGVNAEITYSIYHV-----SNTGLHKFRIDPRSGVIETTGKL-IAGEQ-YSI 124
               +  +   +N+ +TYS+  +     S   L  F I+  +GVI  T  L    EQ +  
Sbjct: 6118 VSASDSDVSSINSALTYSLRDIIDMSGSGQSLLPFTINSSTGVITLTMALDYEKEQMFDF 6177

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
             V   D+G  S Q+ V V++ V   N  +PVF Q+ Y   V E AS  ST+ T+    + 
Sbjct: 6178 IVTCQDSGTPSRQSNVPVTINVADANDNAPVFSQDMYPATVPEDASFGSTILTVQARDVD 6237

Query: 184  SG 185
            SG
Sbjct: 6238 SG 6239



 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEATDND 79
            F V A +    + +   ++ V++ D+NDN+P     P    I   EA   I+ +EATD D
Sbjct: 5086 FVVYAADGGNPSRTSSAAVNVSVIDVNDNSPMFIGDPYSGSIPENEAGYNILTVEATDAD 5145

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
             G N++ITY    +  T    F ID  +G + +   L    +  Y + V A D G   ++
Sbjct: 5146 YGSNSQITY----ILQTHTDLFSIDSSTGQLRSLVGLDFESRCFYQLQVVAVDGGSPPRN 5201

Query: 136  SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            S T+++++V+P  N   P F   +Y V + E
Sbjct: 5202 STTLIDINVIPH-NDHPPTFSSPSYSVQIFE 5231



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 7/132 (5%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEA 75
            F   V+A E      S   +L +++NDINDN P        Q +  E       +  + A
Sbjct: 3131 FSLLVVASEVAMPNMSGYANLLIHVNDINDNRPLFDQ-DEYQFELLENLPPGTSVGTVSA 3189

Query: 76   TDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLIAGE--QYSITVQATDTG 132
            +D D G+NA+I+YSI  V     +  F I+  SG I +T      E  +Y+  V ATDTG
Sbjct: 3190 SDADSGINADISYSILSVHPPSHYPSFTINSTSGEITSTQSFDREETDEYTFMVAATDTG 3249

Query: 133  GKSSQTIVEVSV 144
             ++S   V V V
Sbjct: 3250 HRNSSVTVTVRV 3261



 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 12/154 (7%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEAT 76
            F F V  ++    +    V +T+N+ D NDNAP     M P    +       I+ ++A 
Sbjct: 6175 FDFIVTCQDSGTPSRQSNVPVTINVADANDNAPVFSQDMYPATVPEDASFGSTILTVQAR 6234

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT--VQATDTG-- 132
            D D G N+ I Y I     TG   F ID  +GVI   G+L    + SI   V A D+G  
Sbjct: 6235 DVDSGSNSRIVYEI-----TGTVTFIIDATTGVISLVGELDYETETSIVFDVLARDSGIQ 6289

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             + S  +V ++V    N   P F    Y+  V E
Sbjct: 6290 EQVSTAVVNITVT-NVNDNPPSFLNQVYNFTVYE 6322



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 15/192 (7%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ- 60
            LV+    LDR+  +       +IA     T      +LT+ L D+NDN P+    P +  
Sbjct: 3420 LVIVSAGLDRE--SQMIHYLPIIAFNPNSTGPITTQNLTITLIDVNDNIPQFSADPILFS 3477

Query: 61   -IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             ++     + +  + ATD D   NA++TY++     +    F I+P +G I  T  L   
Sbjct: 3478 VLENHTLGQSVGVLTATDIDQLSNAKLTYTLSQPDPS--LPFAINPLTGEINLTSSLDYE 3535

Query: 120  --EQYSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
                YS     TD G      ++  IV VS +   N  SP+F  + Y+V+V E    +S 
Sbjct: 3536 LVTSYSFNAIVTDGGEPALFSTALVIVNVSDI---NDNSPIFTSDVYNVSVLESIKTSSV 3592

Query: 174  VATITVSRLASG 185
            +  ++ S + SG
Sbjct: 3593 IIQLSASDVDSG 3604



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 10/133 (7%)

Query: 40   TVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            T+ + D+NDN P        Q    E      +  + ATD D   N EI+YS  +     
Sbjct: 4899 TITVTDVNDNTPSFSQ-DSYQGSVPENLLDEYVATVSATDLDSTSNGEISYSFENPDT-- 4955

Query: 98   LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSP 153
            L  F ID  +GVI T  +L   EQ  Y++TV ATD G    +    V+VSV+   N  +P
Sbjct: 4956 LQYFTIDNTTGVIRTASELNREEQQSYTLTVLATDAGDIPLTGSATVDVSVL-DINDNTP 5014

Query: 154  VFQQNTYDVNVSE 166
             F    Y  +V E
Sbjct: 5015 SFSATEYSASVLE 5027



 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAG-EQYSITVQ 127
            + ++ A+D D G +  ITYSI  VS + G+++F I   +G I          + Y+ITV 
Sbjct: 4727 LARVMASDGDSGTDGRITYSIVSVSPSVGMNRFTIGSDNGRITAVSLDREDIDMYNITVA 4786

Query: 128  ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            ATD+G   +     V+V V   N  SP F Q+ Y +++ E
Sbjct: 4787 ATDSGPDPNTATALVTVEVLNENDNSPYFPQSVYHLSIPE 4826



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 10/154 (6%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEAT 76
             +   V+A +      +   ++ V++ DINDN P          +        IV + AT
Sbjct: 4981 SYTLTVLATDAGDIPLTGSATVDVSVLDINDNTPSFSATEYSASVLENIPNVYIVTVNAT 5040

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS--ITVQATDTG-- 132
            D D G N  ITYS+   SNT +  FRID  +G I   G L      S    V A D G  
Sbjct: 5041 DPDNGSNGSITYSL---SNT-VTLFRIDGVTGDIYAIGSLDRETTSSQVFVVYAADGGNP 5096

Query: 133  GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
             ++S   V VSV+   N  SP+F  + Y  ++ E
Sbjct: 5097 SRTSSAAVNVSVI-DVNDNSPMFIGDPYSGSIPE 5129



 Score = 40.0 bits (92), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 18/156 (11%)

Query: 28   KQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAE 85
            + G AA     + + +ND NDN P  ++    P+    G      V + A+D DL  N +
Sbjct: 5973 EAGGAAPGTAMIVITVNDTNDNIPIGQINENSPVGTSVG------VSVAASDGDLPSN-Q 6025

Query: 86   ITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG---KSSQTIV 140
            IT   Y++S     +F ID  + VI T     A      S  V A D+ G   +SS   V
Sbjct: 6026 IT---YYISGKDADRFTIDQSTSVILTAAVFDAEITTALSFNVTAEDSYGSVVQSSSAPV 6082

Query: 141  EVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
             + VV   N  +P+F    Y +NVSE   +  ++ T
Sbjct: 6083 SI-VVIDINDNAPLFDLPFYQLNVSEDTPVGQSLLT 6117



 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 11/162 (6%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEA 75
            + F V A +       +  ++T N+ D+N+  P   RL        +      +++ ++A
Sbjct: 2799 YMFTVSASDGLKNTHVITTNVTANIMDVNEFPPVFNRLDYSDSAVCENVPLGTEVLTVQA 2858

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
            TD D G   +I YSI   SN+    F ++  +GVI T   +       + S  V ATD G
Sbjct: 2859 TDGDAGSFGQIFYSI--DSNSISCCFDVNSTTGVIYTNSSIDFDTGDYRRSFYVIATDLG 2916

Query: 133  GKSSQ--TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
            G+ S   T V ++++   N   P+F   +  V + E   + S
Sbjct: 2917 GRVSSIGTFVTITIL-NDNDHIPMFPNQSLAVAIPENFPVQS 2957



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 24/154 (15%)

Query: 45   DINDNAPR---------LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            D+NDN P          +P I P+          +  + ATD D G N  +TY+I    N
Sbjct: 6405 DVNDNQPSFTQSIYTESIPEIYPV-------NTFVTTVTATDPDEGENGTVTYAIVG-GN 6456

Query: 96   TGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
             G   F I P +G+I   G L       Y++T+ A+D GG +  + + ++V    N  SP
Sbjct: 6457 VG-EAFTIMPSNGMIRVNGPLDHETVSSYNLTLVASDGGGLTGTSHLLITVTDS-NDESP 6514

Query: 154  VF--QQNTYDVNVSEG-ASINSTVATITVSRLAS 184
            +    Q++Y      G  SI S++  I    L S
Sbjct: 6515 ILVISQSSYTYTEEAGLVSITSSLQLIEPDLLQS 6548



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 56/213 (26%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            + ++  +DR+      +   V A E      S   ++ V++ DINDN       PPI +Q
Sbjct: 5299 ITTRTEIDRE--MNSSYLLTVTATEAASNLTST-ATVYVSIIDINDN-------PPIFLQ 5348

Query: 63   AGEARR---------QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--- 110
               +R          QI+++ ATD D      + Y I +     +  F I  R+G I   
Sbjct: 5349 RSYSREIPESTPVGTQILQVMATDADFIDQGNLRYQILNF----VPLFNISSRTGAIYLA 5404

Query: 111  --------ETTGKLIAGEQYS----------ITVQATDTGG--------KSSQTIVEVSV 144
                    E+T +  + E +           +T+   DT           SS T +E S+
Sbjct: 5405 EAVDFETIESTTRTFSVEVFDSGNVHFDLIPVTISIIDTNDLPPYIATVSSSLTFIEGSI 5464

Query: 145  VPGP----NTRSPVFQQNTYDVNVSEGASINST 173
              GP    N   P   QN Y  NV+   S N+T
Sbjct: 5465 SLGPFPDMNITDPDVLQNLYSANVTLATSTNNT 5497



 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEA 75
             + F  I  +    A      + VN++DINDN+P     +     +++ +    I+++ A
Sbjct: 3539 SYSFNAIVTDGGEPALFSTALVIVNVSDINDNSPIFTSDVYNVSVLESIKTSSVIIQLSA 3598

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG 133
            +D D G NA+IT+S+   S      F I+  S V+     L   +  +Y+  V ATD G 
Sbjct: 3599 SDVDSGSNADITFSLIDSS----LPFYIN-GSYVLLGASSLDRESVSEYTFNVVATDGGH 3653

Query: 134  KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
             S  +  +V V V   N  SPV      + ++ E   I + VA   V+
Sbjct: 3654 PSRNSTAQVIVTVQDVNDNSPVIDLVYLNDSIPENTQIGTVVAIFNVT 3701


>gi|157128514|ref|XP_001661464.1| cadherin [Aedes aegypti]
 gi|108872553|gb|EAT36778.1| AAEL011164-PA, partial [Aedes aegypti]
          Length = 2413

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI-QAGEA 66
            LDR+  +       V  R+  G   S  + +T+   D+NDN P   M P  + + +  E 
Sbjct: 839  LDRETQSKFHLVAHVQDRDHPGWECSSQIEITIT--DLNDNPPDFSMNPYSVTLPEDAEV 896

Query: 67   RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
               + KI ATD D+G+N +I YS     ++    F+I P SG++ T  K +  E    Y+
Sbjct: 897  GTLVTKIHATDADIGINRKIKYSFI---DSYRDHFKIAPDSGIV-TLAKPLDREVKAVYN 952

Query: 124  ITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
            +TV+ATD G  S S +   V  V   N   P F    Y  +V E +SI + V  +  +  
Sbjct: 953  LTVRATDQGKPSLSNSAFLVVNVQDINDNPPEFTSKHYFASVLENSSIGTEVLRVLATSK 1012

Query: 183  ASG 185
             +G
Sbjct: 1013 DTG 1015



 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 13/159 (8%)

Query: 30  GTAASVPVSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
           G +A VPVS+ V   D+ND  P +      +    + Q G A   I+K++A DND G+N 
Sbjct: 28  GVSAEVPVSVLVQ--DVNDCPPEIEQDSYNITVSERAQFGTA---ILKVQAKDNDTGINQ 82

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEV 142
            +TY++   S      F +DP  GVI     L       +  TV A+D G  S  +   V
Sbjct: 83  VVTYALQTDSKNTSEYFHMDPTDGVIYLKKSLDHETLSHHHFTVIASDKGVPSLSSTAHV 142

Query: 143 SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V V   N   P F+Q +Y   +SE A+    V  ++ S
Sbjct: 143 WVSVMDMNDNPPKFEQPSYTCVLSEHATRGQFVTVVSAS 181



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 7/172 (4%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEAT 76
            +   V A ++   + S    L VN+ DINDN P           ++      +++++ AT
Sbjct: 951  YNLTVRATDQGKPSLSNSAFLVVNVQDINDNPPEFTSKHYFASVLENSSIGTEVLRVLAT 1010

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGK 134
              D G+NAEITYSI  +      KF +  ++GV+           + Y +T+QA D G  
Sbjct: 1011 SKDTGINAEITYSI--IGGNEHRKFAMHNKTGVLYLADVVDYERAKDYFLTIQAVDGGTP 1068

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                +  V++ V   N   P F  N+Y   + E A     +  I  + + SG
Sbjct: 1069 PLSNLATVNISVADCNDNPPQFTANSYTATIREDAQKGDKMLQIRANDMDSG 1120



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           ++  K++LD +        F VIA +K   + S    + V++ D+NDN P+        +
Sbjct: 107 VIYLKKSLDHE--TLSHHHFTVIASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSYTCV 164

Query: 62  QAGEARR-QIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
            +  A R Q V  + A+D D   +  +TY+I       L  + I+P SG+I         
Sbjct: 165 LSEHATRGQFVTVVSASDPDYIDHDRLTYTI--AQGNELQTYDINPVSGIITLVNMQNFA 222

Query: 120 EQYS--ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           E++   + V  TD G  +S T V+++++P  N  +P F+   YDV V+E       V T+
Sbjct: 223 EKHVTILNVSVTD-GVYTSFTRVKITILPA-NLHNPTFEHLFYDVKVNENQLAGRLVTTV 280



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 40   TVNLN--DINDNAPRLPMIPPIQIQAGEARR--QIVKIEATDNDLGVNAEITYSIYHVSN 95
            TVN++  D NDN P+            +A++  ++++I A D D G N+ ++Y I     
Sbjct: 1075 TVNISVADCNDNPPQFTANSYTATIREDAQKGDKMLQIRANDMDSGENSRVSYRIERGDR 1134

Query: 96   TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
             G  +F I+  +G I   G L   +   Y + VQA D G  S  T V V++ +   N   
Sbjct: 1135 MG--QFDIEEDTGYISVAGTLDRESISSYVLEVQARDHGSPSLSTYVLVNIEISDANDNP 1192

Query: 153  PVFQQNTYDVNVSEGASINSTVATITVS 180
            P+F  N Y   V E   I  T+    V+
Sbjct: 1193 PLFTSNNYTAVVQEDKQIGFTLLKFEVT 1220



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 39  LTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
           +T+++ D NDN P     P        I+ G +   I+K+ A D+D G N +I YS+   
Sbjct: 555 VTLHVQDENDNTPMFESNPYSFSLAENIEKGSS---IMKLTARDSDSGSNGDIRYSLSTE 611

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
               ++ F ID  +G I T   L     E Y   V ATD G     T   V + +   N 
Sbjct: 612 VGDIVNIFDIDAYTGWITTLVPLDKEKREDYKFQVIATDNGQPKHSTRTTVIIRLKDYND 671

Query: 151 RSPVFQQNTYDVNVSEGA 168
             P F+++ Y  +VSE A
Sbjct: 672 CPPTFKESHYKASVSEDA 689



 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
           A R +  ++A D D G    +TY I  +S+     F ID   G I T  KL   E+  Y 
Sbjct: 273 AGRLVTTVKAQDKDFGEFGRLTYFI--ISDEIQEYFSIDKDKGEIVTKKKLDREERKLYE 330

Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           + + A D+GG++  T V V+ V   N   PVF    Y   +    + N+T   +
Sbjct: 331 VPIMAMDSGGRAGFTTVRVN-VGDENDNPPVFLLREYKALIQGNLTTNTTFFRV 383



 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V+K+ LDR+      +   ++A +  G A    V   VN+ D NDN P   +     + 
Sbjct: 315 IVTKKKLDREERK--LYEVPIMAMDSGGRAGFTTVR--VNVGDENDNPPVFLLREYKALI 370

Query: 63  AGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIAG 119
            G         +++A D+D   NA + YSI+   N+G+ + F ID  +G I      +  
Sbjct: 371 QGNLTTNTTFFRVKAVDSDDNQNAVVKYSIFDSQNSGIKELFGIDENTGGIYLRKSAVRW 430

Query: 120 EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           E   +   ++A D G  S  T V + + +       PVF++    + +SE +S+  TV T
Sbjct: 431 ENQLFQFFIRANDGGVPSLYTDVPIDIYIMSSAENPPVFEKKEKLLFLSE-SSLPGTVIT 489


>gi|348576488|ref|XP_003474019.1| PREDICTED: protocadherin-15-like isoform 10 [Cavia porcellus]
          Length = 1537

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 13/167 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           + F + A +  G   S PV + + + D NDN P  P I        + R    ++++ A 
Sbjct: 477 YTFSITAFD--GVQESKPVVVNIRVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAV 534

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG-- 132
           D D G N EITY I  V   G   F I+  +G+I      +LI G  Y++TVQA D    
Sbjct: 535 DADEGSNGEITYEIL-VGAQG--DFVINKTTGLITIAPGVELIVGRTYALTVQAADNAPP 591

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + S   V V V+P  N   P F Q  Y + +SE   I + +  +
Sbjct: 592 AERRQSICTVYVEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNL 638



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQY 122
           EA   + ++ ATD D G+N ++ YS+ + +N     FRI   +G I T  KL     + Y
Sbjct: 731 EANAFVGQVRATDPDAGINGQVHYSLGNFNNL----FRIT-SNGSIYTAVKLNREVRDYY 785

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V ATD       + + +++ V   +  SPVF  +TY V V E
Sbjct: 786 ELIVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEE 830


>gi|449676278|ref|XP_004208594.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Hydra magnipapillata]
          Length = 919

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 10/176 (5%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEAT 76
           F   + A +K         ++ +++ DINDN P   M   ++    E    + I+ ++A+
Sbjct: 112 FALDITASDKDNLNLIAYTTVKISILDINDNHPIFSMPAYLKTIKEEQPLNQFILTVQAS 171

Query: 77  DNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG- 132
           DND G+N+EI YSI  + NT +   F ID ++GVI+    L       Y + V+A D G 
Sbjct: 172 DNDFGINSEIKYSI--IKNTSIDIPFEIDEKTGVIKNVQILDREIKSFYLLYVKAEDKGV 229

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
             G    T++    +   N   P F ++ + + + E   +N  +  +T +   SG 
Sbjct: 230 DPGSLFATVLVNITLEDINDNKPTFSKSKFVITLPEDTPVNQVILNVTATDADSGL 285



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 27/182 (14%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLT------VNLNDINDNAPRLPMI-PPIQ 60
           NLDR+     K  +Q+I    +      PVSL+      + L D+NDNAP+       ++
Sbjct: 601 NLDREK----KLSYQLII---EAVDHGKPVSLSSTTTVIIRLIDVNDNAPKFVKDNYDVE 653

Query: 61  IQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
           I    A    V  + A D+D G+N  I+YSI    ++G   F I   +G+I TT KL+  
Sbjct: 654 ILESVAIGSFVTTVSAIDDDDGINKLISYSI---ESSGDDSFAIASDTGII-TTIKLLDR 709

Query: 120 E---QYSITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
           E    Y ITV ATD G K   T + V+++       SPVF+++ Y  +++E    NST  
Sbjct: 710 EVIPAYKITVVATDKGIKQLSTSILVNIILKDVQDSSPVFEKSIYYFSINE----NSTTK 765

Query: 176 TI 177
           T+
Sbjct: 766 TV 767



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 37/185 (20%)

Query: 9   LDRDPPNPGKFRFQVIAREKQGT-----AASVPVSLTVNLNDINDNAPR---------LP 54
           LDR+  +   F    +  E +G       A+V V++T  L DINDN P          LP
Sbjct: 210 LDREIKS---FYLLYVKAEDKGVDPGSLFATVLVNIT--LEDINDNKPTFSKSKFVITLP 264

Query: 55  MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
              P+        + I+ + ATD D G+N +I Y     S     +F ID  SG I+   
Sbjct: 265 EDTPVN-------QVILNVTATDADSGLNGKIEYRRLSQS-----EFSIDSSSGEIKLVE 312

Query: 115 KLI---AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
            L    + + Y   V A D G   + +  +VEV +V   N  SP+F + +Y  ++SE + 
Sbjct: 313 PLDYDRSNKLYEFVVDAFDCGFPPQHASVMVEV-IVEDVNDNSPIFTRRSYKTSISESSE 371

Query: 170 INSTV 174
           I + V
Sbjct: 372 IGTIV 376



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 39  LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNT 96
           LT+N+ D N+N PR    I  + +        I+ KI ATD+D G NA+I+Y + +    
Sbjct: 527 LTINIYDANNNYPRFAESIVTLMVAEDVPIGTIIGKITATDDDSGDNAKISYFLQNPD-- 584

Query: 97  GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG---GKSSQTIVEVSVVPGPNTR 151
               F ++  +G + T   L   ++  Y + ++A D G     SS T V + ++   N  
Sbjct: 585 --ENFLLNKDTGELYTQLNLDREKKLSYQLIIEAVDHGKPVSLSSTTTVIIRLI-DVNDN 641

Query: 152 SPVFQQNTYDVNVSEGASINSTVATIT 178
           +P F ++ YDV + E  +I S V T++
Sbjct: 642 APKFVKDNYDVEILESVAIGSFVTTVS 668



 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 8/168 (4%)

Query: 7   ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPIQIQA 63
           E LD D  N   + F V A +         V + V + D+NDN+P   R      I   +
Sbjct: 312 EPLDYDRSNK-LYEFVVDAFDCGFPPQHASVMVEVIVEDVNDNSPIFTRRSYKTSISESS 370

Query: 64  GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
                   K+ A D+D G N  +TYS    +   L  F +DP +G ++   KL     + 
Sbjct: 371 EIGTIVFNKLTAKDDDSGENGRVTYSFLSDTPKDL-PFLLDPLTGALKVLNKLDYEVKKS 429

Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
           Y+  V A+D G       V V++ V   N  SP F+ ++Y +++SE A
Sbjct: 430 YTFFVVASDHGVPQRSDQVSVTIDVENINDNSPHFKNSSYIISISEDA 477



 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIEATD 77
           ++  V+A +K     S  + + + L D+ D++P     I    I      + + K+ AT 
Sbjct: 715 YKITVVATDKGIKQLSTSILVNIILKDVQDSSPVFEKSIYYFSINENSTTKTVGKVTATL 774

Query: 78  NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
            D      + YSI   S    + F I  R+GVIE +  L    Q  Y + V+A+   GK 
Sbjct: 775 ADKDFQNSLIYSI---SKNIQNYFNIVRRTGVIEVSRSLDYEIQSIYILEVRASAPSGKE 831

Query: 136 SQTIVEVSVV 145
            + +V V+V+
Sbjct: 832 DKCVVNVTVL 841



 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEAT 76
           + F V+A +      S  VS+T+++ +INDN+P       I   + +A R   +++++A 
Sbjct: 430 YTFFVVASDHGVPQRSDQVSVTIDVENINDNSPHFKNSSYIISISEDAIRGTPLLQVQAE 489

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG 108
           D D   +    YSI      G H F+ID  SG
Sbjct: 490 DLDYLSSENFEYSIVD----GAHCFQIDAFSG 517


>gi|268575352|ref|XP_002642655.1| C. briggsae CBR-CDH-3 protein [Caenorhabditis briggsae]
          Length = 3207

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 12/163 (7%)

Query: 25   AREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLG 81
            A++    + S    + +++ D+NDNAP     P   ++  E  +   +I++I+ATD DL 
Sbjct: 1699 AKDSGFRSLSATSRILIHVEDVNDNAPEFDQ-PSYYVKIKEDVQIGVKILRIQATDADL- 1756

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVE 141
             N+ + YS     + G+  FRID  +G I   GKL   E Y I V  +D G + S+  +E
Sbjct: 1757 -NSVLQYSW---DSEGIIPFRIDVATGWITVAGKLEDSE-YQIFVLVSD-GERFSRASLE 1810

Query: 142  VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
            + V    N  SPV   +  DV VSE  S  + +  I VS L S
Sbjct: 1811 IEV-EDVNDHSPVILNSNLDVYVSESFSSENVIHVIDVSDLDS 1852



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 16/163 (9%)

Query: 20  RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDND 79
           R +VI   +  T  +V   +TV L  +N ++P         +++ +    I K+ ATD D
Sbjct: 590 RLEVILENRNTTQTAV---VTVLLKPLNRHSPVCADTKVRVLESEKPGNFIGKLHATDAD 646

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            G+N  ++Y I   S      F +D  +G +     L A  Q  Y+I  +A D+G  SSQ
Sbjct: 647 PGINGVVSYRILENSRI----FHVDSTTGKLRILKNLDAETQRNYTIFYEAKDSG--SSQ 700

Query: 138 TIVEVS---VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            I   S   +V   N  +P F  + Y   VS G S N TVA +
Sbjct: 701 RITNCSAQIIVEDVNDNAPKFTSSFYSAKVS-GKS-NETVAIV 741



 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATD 77
            K  +++  R   G A  +  SL +N+ D+NDN P       I +    +  +I K+ ATD
Sbjct: 2178 KTSYRIKVRLTDG-AWLIETSLFINIKDVNDNFPIFEKSEYIFVSQKNSS-EIGKLHATD 2235

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQ 137
             D G N +ITYS+          FRI P SG++ T  + ++ +   + V A D G    Q
Sbjct: 2236 LDSGPNGKITYSLTSPF------FRIHPDSGLL-TKLRPLSDDVTILEVVAMDHGTPRLQ 2288

Query: 138  TIVEVSV 144
              V+V V
Sbjct: 2289 NYVKVYV 2295


>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
            [Camponotus floridanus]
          Length = 3508

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 29   QGTAASVPV-SLTVNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLG 81
            QGT   + + SL VN+ DINDN P          +P I     E    + ++ AT  D G
Sbjct: 2017 QGTPQLMGIASLIVNVQDINDNPPEFASKIYFAKVPEIYAIGTE----VARVLATSKDTG 2072

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG--GKSSQ 137
            +NA+I YSI  V      KF+I+ ++GVI    +L       Y +T+QA D G    S+ 
Sbjct: 2073 INADIYYSI--VGGNEHKKFQINAKTGVIIIAEQLDYERARDYFLTIQAVDGGIPPLSNH 2130

Query: 138  TIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
              V ++V    N  +P+F + +Y   V E A I   V  +  + L S
Sbjct: 2131 ATVNITVTDS-NDNAPIFSEVSYRAFVREDAKIGEKVTQVYANDLDS 2176



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 22  QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EARRQIVKIEATDND 79
           +V  R+      S    + + + DIND+ P        +QI A     + + ++ A D D
Sbjct: 40  KVTVRDDGRPPLSSTTRVVIEVADINDHGPEFEAKFYTVQIPASLTTDKPLFQVLAYDQD 99

Query: 80  LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQ 137
           +G N  I YSI      G  KF+I P +G++ +     AG++Y + ++A D G   +S Q
Sbjct: 100 IGENGRIQYSI--KGGRGKGKFKIHPTTGMVYSQRGFEAGQEYEMMIRAADHGEPPRSHQ 157

Query: 138 TIVEVSVVPGPNTRS--PVFQQNTYDVNVSEGASINSTVATITVS 180
           T V V VV  P      P F+ N   V V+E       VA +  S
Sbjct: 158 TRVSVQVVEAPKESENPPAFKTNNQSVQVTESDQAGFLVALMQAS 202



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 18/186 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-----IPPIQIQA 63
            LDR+     K+      +++          L + ++D+NDNAP+  M       P  ++ 
Sbjct: 1896 LDRE--TQAKYSLMAHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMQTYSSTLPEDVEV 1953

Query: 64   GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--- 120
            G     + K+ ATD+D+G+N +I Y    + +   H F I   SG++ T  K +  E   
Sbjct: 1954 GTL---VTKVHATDDDIGINRKIRYEF--IDSADGH-FLIAADSGIV-TLAKPLDRETKA 2006

Query: 121  QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
             Y++T+QA D G      I  + V V   N   P F    Y   V E  +I + VA +  
Sbjct: 2007 MYNVTIQALDQGTPQLMGIASLIVNVQDINDNPPEFASKIYFAKVPEIYAIGTEVARVLA 2066

Query: 180  SRLASG 185
            +   +G
Sbjct: 2067 TSKDTG 2072



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 11/158 (6%)

Query: 30   GTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEI 86
            G  A V VS+ V   D+ND  P         I   EA      ++++ + DND G+N ++
Sbjct: 1086 GVYAEVLVSILVL--DVNDCPPEFTQ-DSYNISISEAAPFGTSVLRVSSRDNDTGINQQV 1142

Query: 87   TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEV 142
             Y+I + +      F ID   GVI     L     E +  TV A D G    SS   V V
Sbjct: 1143 RYAIQNDTENSTDLFHIDADEGVIFLKQSLDHETHESHHFTVIAMDRGVPSLSSTAHVWV 1202

Query: 143  SVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            SV+   N   P F+Q +Y  ++SE A     V  ++ S
Sbjct: 1203 SVI-DMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSAS 1239



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 11/200 (5%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
            +V+++ LDR+     + R+++      G   S  V + V + D NDN+P   +      I
Sbjct: 1372 IVTRKKLDREE----QKRYEIPVMAMDGGGRSGFVMVRVKVGDENDNSPVFLLREYKATI 1427

Query: 62   QAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLIAG 119
            Q   +     +K++A D D    A+ITYSIY +  +     F I+P +G +      +  
Sbjct: 1428 QGNLSINTSFLKVKAQDADEDEAAKITYSIYDLQTSPAKSLFGINPDTGSLYLQKSAVPW 1487

Query: 120  EQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
            E   + + ++A D G  +    V +S+ + GP+  +P+F++      + E +S+ + +  
Sbjct: 1488 ENQLFELFIRAEDRGTITHHADVPLSIYIMGPHDIAPLFERKEDKFFIREDSSVGTPITK 1547

Query: 177  I-TVSRLASGCAIMNKEENS 195
            + TV+       I++ +EN+
Sbjct: 1548 LKTVTNSTVTYRIVSGDENN 1567



 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDND 79
            V+A        +    +++ + D ND+AP+     P  I   E   +   I+K+ A D D
Sbjct: 1596 VLAETDSSPPLTALAEISLQVLDENDHAPKFES-NPYAISLAENIEEGTSILKVIAHDKD 1654

Query: 80   LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQ 137
            LG N E+ YS         + F +D  +G I T  +L   +Q  Y   V ATD G     
Sbjct: 1655 LGSNGEVRYSFGSDIGELANVFAVDAYTGWISTLVQLDKEKQPEYKFQVVATDNGNPKHF 1714

Query: 138  TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
                V V +   N  +P F  + Y+  V+E A
Sbjct: 1715 ARTSVHVKLKDYNDNAPAFVDDRYEATVNENA 1746



 Score = 43.5 bits (101), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 12/123 (9%)

Query: 82   VNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQT 138
            +N ++ YSI         +F +D  +GVI    +L     +QY +TV+ATD+  G  ++ 
Sbjct: 1034 LNRKLIYSI--TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEV 1091

Query: 139  IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC------AIMNKE 192
            +V + V+   N   P F Q++Y++++SE A   ++V  ++     +G       AI N  
Sbjct: 1092 LVSILVL-DVNDCPPEFTQDSYNISISEAAPFGTSVLRVSSRDNDTGINQQVRYAIQNDT 1150

Query: 193  ENS 195
            ENS
Sbjct: 1151 ENS 1153



 Score = 42.4 bits (98), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 37   VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVS 94
            V + V + DINDN P    +P   + + +A++   I K+ A D D G N E+ Y +    
Sbjct: 888  VIVNVTILDINDNCPMFVNLPYYAVVSVDAQKGEVITKVHAIDMDSGDNGEVRYEL---K 944

Query: 95   NTGLHKFRIDPRSGVIETTGKLIA-GEQYSITVQATDTGGKSSQTI---VEVSVVPGPNT 150
                  F++  ++G I     L     +Y +T+ A D GG +  +I   V V V+   + 
Sbjct: 945  KGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD-GGITPCSIEVPVNVKVI---DR 1000

Query: 151  RSPVFQQNTYDVNVSEGASINSTVA 175
              PVF +  Y  +V E   ++S +A
Sbjct: 1001 SMPVFDKQFYTDSVLESIEVHSPLA 1025



 Score = 40.4 bits (93), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 101 FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
           F ++P +GVI    +L     + Y++TV AT+  G S+   V + V+   N  +P F Q 
Sbjct: 530 FFVNPSTGVIVIKNQLDYENTKFYNLTVSATNMAGASATCNVIIHVL-DRNDNAPRFLQA 588

Query: 159 TYDVNVSEGASINSTVATITVSRL 182
            Y   +SEGASI S V T T + L
Sbjct: 589 LYSGEISEGASIGSLVLTNTSTPL 612



 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
            +TV + D+NDN P        +I  +       ++ + ATD D   NA++ + +   +N 
Sbjct: 1820 VTVQVLDVNDNPPYCLRYRYREILSEGSHPGAYVLTVLATDYDDEPNAKLRFYLTGDNND 1879

Query: 97   GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD----TGGKSSQTIVEVSVVPGPNT 150
               KF +D  +GV++T G+L    Q  YS+     D    T   SSQ  + VS +   N 
Sbjct: 1880 ---KFSLDRETGVLKTVGQLDRETQAKYSLMAHVQDRDKPTWECSSQLEILVSDL---ND 1933

Query: 151  RSPVFQQNTYDVNVSEGASINSTVATI 177
             +P F   TY   + E   + + V  +
Sbjct: 1934 NAPKFTMQTYSSTLPEDVEVGTLVTKV 1960



 Score = 38.9 bits (89), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 22/178 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ 60
           ++V K  LD +  N   +   V A    G +A+  V   +++ D NDNAPR L  +   +
Sbjct: 538 VIVIKNQLDYE--NTKFYNLTVSATNMAGASATCNV--IIHVLDRNDNAPRFLQALYSGE 593

Query: 61  IQAGEARRQIVK--------IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           I  G +   +V         I+A D D  +NA + Y I  V +     F ID  +G I T
Sbjct: 594 ISEGASIGSLVLTNTSTPLVIKAEDADSELNALLNYDI--VEDLPRKYFHIDSSTGAIRT 651

Query: 113 TGKLIAGE---QYSITVQATDTGGK--SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNV 164
              L+  E    +S  V+ +D G    SS+T  +V + V   N   P F +  Y+V +
Sbjct: 652 V-MLLDHETIPMFSFHVKVSDLGKPKLSSETTAKVMITVTDVNDCPPKFSKTDYNVTL 708



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 10/158 (6%)

Query: 27  EKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGV 82
           + QGT A    + + V ++D ND+ P   +   IQ +  E       +V++ A D D G 
Sbjct: 355 KDQGTPAKRNYARVIVTVHDHNDHQPEF-ISEIIQGKVYETSPIGSAVVQMCAIDRDRGE 413

Query: 83  NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LIAGEQYSITVQATDTGGKSSQTIV 140
           NA ITYSI    N G + F IDP  G I    +  L    +Y + V+A D G  +    V
Sbjct: 414 NARITYSITS-GNVG-NVFAIDPDLGFIRVARELDLSVSSEYILLVKAIDHGSPALTNSV 471

Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            V V V   +   P F Q      + E   + + V  +
Sbjct: 472 PVHVMVTMADNAPPRFTQKELSAEIYENQQLGTYVKHV 509



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 22/172 (12%)

Query: 19  FRFQV----IAREKQGTAASVPVSLTVNLNDINDNAPRLP-------MIPPIQIQAGEAR 67
           F F V    + + K  +  +  V +TV   D+ND  P+         ++ P         
Sbjct: 663 FSFHVKVSDLGKPKLSSETTAKVMITVT--DVNDCPPKFSKTDYNVTLLTPTYKNVA--- 717

Query: 68  RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQ 127
             ++++ A D D      + Y I  +     H F ID +SG+I           Y + V+
Sbjct: 718 --VIRVNAVDPDSSEGTSLRYDI--IDGNKAHTFNIDAQSGIITVHNPERMKRSYLLHVR 773

Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
            +D G  SS   V V V    N+   +FQ++ Y+  + E ++  +TV  + V
Sbjct: 774 VSD-GKYSSVAQVNVMVEKSENS-GLIFQKSVYEGAILENSTKITTVVVVNV 823



 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 11/169 (6%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
            ++  K++LD +        F VIA ++   + S    + V++ D+NDN P+   P     
Sbjct: 1165 VIFLKQSLDHETHE--SHHFTVIAMDRGVPSLSSTAHVWVSVIDMNDNPPKFEQPSYTCS 1222

Query: 60   QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              +  E  + +  + A+D D  V+ ++TY+I  V       + I   +GVI        G
Sbjct: 1223 LSEHAERGQFVTVVSASDPDY-VDEKLTYTI--VGGNEQQTYNIGQSTGVISLINMQNFG 1279

Query: 120  EQY--SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            EQ    + V  TD G  +S T V++ ++P  N  +P F     +V V E
Sbjct: 1280 EQKLSMLNVSVTD-GVYTSFTRVKIEILPA-NRHNPKFPNPVVEVTVLE 1326


>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
           [Xenopus (Silurana) tropicalis]
          Length = 3142

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 24/193 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+ + E LDR+  +   FR   I       +A+  V++TV+  D ND++P        Q 
Sbjct: 206 LISTIEILDRESMDLHYFRVSAIDHGTPRLSATTMVAITVS--DRNDHSPLFE-----QS 258

Query: 62  QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT 113
           +  E+ R+       I+++ ATD D   NA I Y    V+    H  F ID RSG+I T+
Sbjct: 259 EYRESIRENVEEGYPILQLRATDMDSQANANIKYRF--VNEQAAHSVFEIDARSGLITTS 316

Query: 114 GKLI--AGEQYSITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           G++     E+YS+ V+A+D G     +SS   V+++++   N   P F +  Y V V E 
Sbjct: 317 GQVDREKREKYSLIVEASDQGKDPGPRSSTVKVDITIL-DENDNVPQFSEKRYIVQVRED 375

Query: 168 ASINSTVATITVS 180
              ++ +  +T +
Sbjct: 376 IKTHTEIVRVTAT 388



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RRQIVKIEAT 76
           +   VIA++      S    + + +ND+NDNAP+        I + +A     +V+I AT
Sbjct: 745 YTLAVIAKDNGIPQKSDTTYVEIMVNDVNDNAPQFANTQYHGIVSEDAPPFTSVVQISAT 804

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
           D D   N  + Y+ +   + G   F I+P SG+I T  KL       Y +T  A D G  
Sbjct: 805 DRDSHSNGRVQYT-FQNGDDGDGDFTIEPTSGIIRTVRKLDRESVPFYELTAYAVDRGMP 863

Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
             ++ V + V V   N  +PVF  + ++V V E + + S V  I
Sbjct: 864 PLRSPVRIQVAVQDVNDNAPVFPADEFEVYVKENSIVGSVVGKI 907



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
           +V I A+D D+G NA ITYS+       + +FRIDP +G I     L   +Q  Y++ V 
Sbjct: 695 VVIISASDEDVGENARITYSL----EDNIPQFRIDPDTGAITLRAMLDYEDQVTYTLAVI 750

Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           A D G   KS  T VE+ +V   N  +P F    Y   VSE A   ++V  I+ +
Sbjct: 751 AKDNGIPQKSDTTYVEI-MVNDVNDNAPQFANTQYHGIVSEDAPPFTSVVQISAT 804



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 10/168 (5%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           ++ F V AR+    + S    +T+ + D+NDN P         I+  E       ++ + 
Sbjct: 539 QYVFGVEARDHGNPSLSASAGVTITIMDVNDNRPEFTQREYF-IRLNEDATVGTSVLSVT 597

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
           A D D  VN+ ITY I   +    +       SG+I  +  L   ++  Y +TV A+D  
Sbjct: 598 AIDRD--VNSAITYQITGGNTRNRYAISTQGGSGLITLSLPLDYKQERRYVLTVTASDRI 655

Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
                  V +++    NT  PVFQ   Y V+++E   I STV  I+ S
Sbjct: 656 -LHDNCYVHINITDA-NTHRPVFQSAHYPVDINEDRPIGSTVVIISAS 701



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 36  PVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV-----KIEATDNDLGVNAEITYSI 90
           PV + V + D+NDNA   P+ P  + +       IV     KI+ATD D G NA+I Y I
Sbjct: 868 PVRIQVAVQDVNDNA---PVFPADEFEVYVKENSIVGSVVGKIKATDPDEGPNAQIMYQI 924

Query: 91  YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
             V       F++D  SG +     L   A  +Y I VQAT +    S+  V + ++   
Sbjct: 925 --VEGNIPEIFQMDFFSGELTALIDLDYEAKPEYVIVVQAT-SAPLVSRATVRIKLI-DQ 980

Query: 149 NTRSPVFQ 156
           N  SPV +
Sbjct: 981 NDNSPVLK 988



 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 22/154 (14%)

Query: 37  VSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHV 93
           V + + + D NDN P+      I +Q  E      +IV++ ATD D   NA + Y+I  +
Sbjct: 347 VKVDITILDENDNVPQFSEKRYI-VQVREDIKTHTEIVRVTATDIDKDSNALVHYNI--I 403

Query: 94  SNTGLHKFRIDPRSGVIE--TTGKLIAGEQYSITVQATDTG--------GKSSQTIVEVS 143
           S     +F ID  +G ++  T        +Y++ V+A D G        G  S  +V+V 
Sbjct: 404 SGNSRGQFSIDSVTGEVQIVTPLDFETEREYTLRVRAQDAGRPPLSNNTGTISIQVVDV- 462

Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                N  +P+F    + V+V E A +  ++  I
Sbjct: 463 -----NDHAPIFVSTPFQVSVLENAPLGHSIIHI 491


>gi|390457610|ref|XP_002806521.2| PREDICTED: protocadherin-9 [Callithrix jacchus]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|345788634|ref|XP_003433101.1| PREDICTED: protocadherin-9 [Canis lupus familiaris]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|281345416|gb|EFB21000.1| hypothetical protein PANDA_000357 [Ailuropoda melanoleuca]
          Length = 1660

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 12/158 (7%)

Query: 37  VSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-V 93
           V L + + D+NDNAP     +     ++       ++K+ ATD D G N +I YS    V
Sbjct: 226 VQLLITILDVNDNAPEFDQYIYKVTVLENAFNGTLVIKLNATDLDDGTNGDIIYSFRRPV 285

Query: 94  SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG----GKSSQTIVEVSVVPG 147
           S   LH F I+P +G I T GKL   E+  Y I+V+A D G          +VE+  +  
Sbjct: 286 SPAVLHAFIINPNNGEIRTRGKLDFEEKKLYEISVEAIDKGNIPMAGHCTILVEILDI-- 343

Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            N  +P     +  + V E A + + +A I+VS   SG
Sbjct: 344 -NDNTPEITITSLSLPVREDAQVGTVIALISVSDRDSG 380



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 27/192 (14%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RL 53
            +V ++ LDR+       +  + AR+    A S    +T+ + D NDNAP         R+
Sbjct: 1028 LVLEKALDRE--QRATHQLVLTARDSGQPARSGDAQVTITVVDTNDNAPVFERTVYRARV 1085

Query: 54   PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL-HKFRIDPRSGVIET 112
            P   P           +++++A+D D G N EI YS+ + +   L H F + PRSG +  
Sbjct: 1086 PETAP-------NGTVLLRVQASDPDEGSNGEIRYSLSNGTRASLRHHFDVHPRSGEVRV 1138

Query: 113  TGKLIAGEQ-YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
               L   E      ++A D G      + + +VEV+ V   N  +P     T   +VSE 
Sbjct: 1139 AASLGPPETLLEAYIEARDEGTFGLASTVKLLVEVTDV---NDHAPEVNLLTLSSSVSED 1195

Query: 168  ASINSTVATITV 179
            A+  + +A +++
Sbjct: 1196 AAPGTVIALLSL 1207



 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 27/162 (16%)

Query: 41  VNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIE------------ATDNDLGVNAEITY 88
           V + DINDN P  P          E++R+IV  E            A+D D+GVN+ +TY
Sbjct: 121 VEVKDINDNPPVFP----------ESKRRIVIAESRPPETRFPLDGASDADIGVNSALTY 170

Query: 89  SI----YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            I    Y V +T  ++ +    S V+  +      +++S+ + A D G       V++ +
Sbjct: 171 RIDPNEYFVLDTRNNREQTSSLSLVLRKSLDREQIQEHSLLLTANDGGKPELTGTVQLLI 230

Query: 145 -VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
            +   N  +P F Q  Y V V E A   + V  +  + L  G
Sbjct: 231 TILDVNDNAPEFDQYIYKVTVLENAFNGTLVIKLNATDLDDG 272



 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 19   FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-------PIQI--QAGEARRQ 69
            F FQV AR+      S  V++ + + D NDNAP + + P       P++I  ++  +   
Sbjct: 1364 FHFQVEARDGGIPPRSATVTVNLFVVDRNDNAPVI-LFPVPRNGSVPVEIVPRSAGSGHL 1422

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
            + K+ A D D G NA ++Y I   S++ L  FRI    G + T
Sbjct: 1423 VTKVVAEDADSGSNAWLSYHISQASDSSL--FRISASMGELRT 1463



 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 7/135 (5%)

Query: 37  VSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-H 92
            ++ V + DINDN P + +     P++  A +    I  I  +D D G N ++T S+  H
Sbjct: 334 CTILVEILDINDNTPEITITSLSLPVREDA-QVGTVIALISVSDRDSGANGQVTCSLIPH 392

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
           V    +  F+ +  S V+++     + E Y + V A D G  S      VSV V   N  
Sbjct: 393 VPFKLVSTFK-NYYSLVLDSALDRESVENYVLVVTARDGGSPSLSATASVSVEVADVNDN 451

Query: 152 SPVFQQNTYDVNVSE 166
           +P F Q  Y V V E
Sbjct: 452 APAFAQPEYTVFVKE 466



 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIV------- 71
            +FQV AR+         V+L V + D NDNAP L  + P    AG A  ++V       
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPLRPGAGGAGGALSELVSRSVGAG 590

Query: 72  ----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
               K+ A D D G NA ++Y +   +      FR+   +G I TT  L
Sbjct: 591 HVVAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVALYTGEISTTRSL 639


>gi|262263223|tpg|DAA06600.1| TPA_inf: protocadherin gamma b2 isoform [Anolis carolinensis]
          Length = 940

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)

Query: 37  VSLTVNLNDINDNAPRLPM-IPPIQIQA-GEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
           +++ VN+ DINDNAP     I  + ++        +++++A+D+D G NAEITY+   ++
Sbjct: 228 LNIRVNVTDINDNAPVFSQAIYKVSLKENAPIGMSVLQVKASDSDEGSNAEITYTFSDIA 287

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
             G  KF +DP+ G I T  + I  E   +Y + +QA+D GG  +   VE+ V+
Sbjct: 288 EKGEQKFTLDPKDGKI-TLLENIDFENRKKYVMIIQASDGGGLVAHCKVEIEVL 340



 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 15/183 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP 58
           + +++  +LDR+     ++   +IA +K     S   ++++ ++DINDN P    P    
Sbjct: 404 FKLLTDGSLDRE--RVPEYNITIIAMDKGTPPLSTHKTISIMISDINDNPPAFEKPSFTA 461

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGK 115
             ++   A   +  ++A+D DL  NA+ITYS    S   L       I+  +G I +   
Sbjct: 462 YILENNPAGVSVFHVKASDPDLDRNAQITYSFLSTSIEDLPLSSYISINSETGTIYSQRS 521

Query: 116 LIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
               +  ++ I V+  D G    SS   V V ++   N  SP   Q  Y     EG+S+ 
Sbjct: 522 FDYEQLREFQIEVKVQDGGSPPLSSSATVTVCIL-DRNDNSP---QILYPSQTPEGSSVF 577

Query: 172 STV 174
             V
Sbjct: 578 EMV 580


>gi|326673783|ref|XP_700763.5| PREDICTED: protocadherin-1 [Danio rerio]
          Length = 1157

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ-IQAGEARRQIVKIEA 75
           ++R +++A +    A S   SL V + D+NDNAP   P +  ++  +  +   +++ + A
Sbjct: 444 EYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVA 503

Query: 76  TDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
           TD D G NAE+TYSI   S   GL  F I+P +G +    +L     + Y   V A D G
Sbjct: 504 TDADSGTNAELTYSITGGSVPEGL--FEINPNTGEVRVMSQLDREQLDHYQFLVAAADKG 561

Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             S +    V V V   N   P F  N Y  +V E     S V  +TV+    G
Sbjct: 562 VPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEG 615



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 29/168 (17%)

Query: 39  LTVNLNDINDNAPR---------LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
           L + + D NDN P+         LP   P+          +++++A D+D+G N E+TYS
Sbjct: 239 LRITITDANDNVPKFERSHYEGELPENSPVG-------HSVLQVKANDSDMGPNGEVTYS 291

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT---VQATDTG--GKSSQTIVEVSV 144
           ++  S+  +    ID  +G+I   G  +  E+ SI    VQA D G   KSS+ +V ++V
Sbjct: 292 LHQPSSPVMRLLSIDRNTGIIFVKGS-VDREEISILKFYVQAKDNGPQSKSSKALVTITV 350

Query: 145 VP----GPNTRSPVFQQNTYD---VNVSEGASINSTVATITVSRLASG 185
                  P+ R       T++    N+SE   + + VA + VS    G
Sbjct: 351 KDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEG 398



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y ++S  + DR+  +   FR + +  +      S  V +T+N+ D NDNAP +       
Sbjct: 638 YTILSTISFDREKESTYSFRLKAV--DGGDPPRSSYVGITINVLDENDNAPYVTKPANSS 695

Query: 61  IQAGEARR----QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI---ETT 113
            +  + R      +  +EA D D+G+N+E+ ++I   +  GL  FRI     +    E T
Sbjct: 696 YKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGL--FRISSEGEITLAKEFT 753

Query: 114 GKLIAGEQYSITVQATDTGGKSSQTIVEVSV 144
            K I    + + V+  D G    QT   V +
Sbjct: 754 PKHIG--LHRLVVKVKDKGTPPRQTTALVHI 782


>gi|219519635|gb|AAI44322.1| PCDH9 protein [Homo sapiens]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|73989087|ref|XP_848939.1| PREDICTED: protocadherin-9 isoform 2 [Canis lupus familiaris]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|449499372|ref|XP_002192746.2| PREDICTED: protocadherin-18 [Taeniopygia guttata]
          Length = 1134

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 21/214 (9%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPP 58
           YL+++   LDR+     ++   VIA +K   + S     TV ++D NDN PR        
Sbjct: 415 YLILTNATLDRE--KRSEYILTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEV 472

Query: 59  IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG---LHKFRIDPRSGVIETTGK 115
           + ++       I  + ATD DLG N ++TY+I   S  G        IDP +G I     
Sbjct: 473 VILENNSPGAYITSVTATDPDLGDNGQVTYTILENSVLGSSITTYVTIDPSNGAIYALRT 532

Query: 116 LIAGE--QYSITVQATDTGGKS--SQTIVEVSVVP----GPNTRSPVFQQNTYDVNVSEG 167
               E  Q + TVQA D G +   S T V ++++      P    P  + +T ++++ + 
Sbjct: 533 FDHEEVNQIAFTVQARDGGSQQLISNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKD 592

Query: 168 ASINSTVATITVSRLASG------CAIMNKEENS 195
           A I   V  I  +   SG      C+I   +ENS
Sbjct: 593 AEIGFLVTRIRATDRDSGMNSELSCSIAADKENS 626



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 25/201 (12%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V +E LDR+  +   +  Q+ A +K     S    L ++++D NDN+P       I I
Sbjct: 198 LIVVRE-LDRELKS--TYELQLTASDKGVPQRSGSSLLKISISDSNDNSPVFEQQSYI-I 253

Query: 62  QAGE---ARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI 117
           Q  E       ++ + ATD D G N ++ YS   HVS   +  FRIDP  G + T  K +
Sbjct: 254 QLLENSPVGTLLIDLNATDPDEGANGKVVYSFSSHVSAKIIETFRIDPEKGHL-TLLKQV 312

Query: 118 AGE---QYSITVQATDTGGKS----SQTIVEVSVVPGPNTRSPVFQQNTYDVN------V 164
             E    Y I  QA D G  S     + I++V  V   N   P    N           +
Sbjct: 313 DYELTKSYEIDAQAQDMGPNSIPAHCKIIIKVVDV---NDNKPEINLNLMSTEREEVACI 369

Query: 165 SEGASINSTVATITVSRLASG 185
           SEG+ +++ VA + V    SG
Sbjct: 370 SEGSPLDTFVALVRVQDKDSG 390



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 29/155 (18%)

Query: 41  VNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
           V + DINDN+P+    + PI+I    A    + ++ A D D+G N+  TYS+     +  
Sbjct: 125 VEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHTYSL-----SAN 179

Query: 99  HKFRIDPRSGVIETTG----KLIAGEQ--------YSITVQATDTG--GKSSQTIVEVSV 144
             F ID R+    T G    +LI   +        Y + + A+D G   +S  +++++S+
Sbjct: 180 DFFSIDVRT---RTDGAKYAELIVVRELDRELKSTYELQLTASDKGVPQRSGSSLLKISI 236

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
               N  SPVF+Q +Y + + E    NS V T+ +
Sbjct: 237 -SDSNDNSPVFEQQSYIIQLLE----NSPVGTLLI 266


>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
          Length = 2137

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
           +++   LDR+     + ++ ++ R   G  +S  + + + ++D+ND++P+   P+     
Sbjct: 141 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHSPKFSRPVYSFDI 195

Query: 61  IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
            +       +  I ATD+D GVN EITY +      G+  F ++P +GV   T  L    
Sbjct: 196 PEDTTPGSLVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPVTGVFNLTRVLDYES 253

Query: 121 Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           Q  Y +TV+A D GG+ +   V  +++   N   PVF  N+Y  ++ E   + STV    
Sbjct: 254 QQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPVFSLNSYSTSLMENLPLGSTVLVFN 312

Query: 179 VSRLASG 185
           V+    G
Sbjct: 313 VTDADDG 319



 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 12/162 (7%)

Query: 31  TAASVPVSLT-VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEI 86
           +A ++P+ L  + L DINDN P  P   +   ++   G+  + I+++ A D D G NA +
Sbjct: 62  SAPALPLQLVEITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALV 120

Query: 87  TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV 144
           TY+I   ++     FRIDP SG +  T +L      +YS+ V+A D G +SS   + ++ 
Sbjct: 121 TYTIISGAD---DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT- 175

Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
           V   N  SP F +  Y  ++ E  +  S VA I  +   SG 
Sbjct: 176 VSDVNDHSPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 217



 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 16/174 (9%)

Query: 15   NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---RLPMIPPI--QIQAGEARRQ 69
            N  +  F V + ++   +     ++T+N+ D NDNAP   ++    P+   ++ G    +
Sbjct: 1290 NINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKMKYFTPVTKNVKVGT---K 1346

Query: 70   IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
            ++K+ A D+ D G+N+E+ Y +   +++G  KF++D  +G I     LI+   + + ITV
Sbjct: 1347 LIKVTAVDDKDFGLNSEVEYFVSGENHSG--KFKLDNNTGWISVASSLISDLNQNFLITV 1404

Query: 127  QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             A D G    SSQ  V++ VV   N  +P F Q      + E  SI + V T++
Sbjct: 1405 TAKDKGNPPLSSQATVQI-VVTEENYHTPEFSQTHVTAALPESHSIGAMVRTVS 1457



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 12/170 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
            K    V A +    A +   S+TVN+ D+NDN+P    +P    P  ++   +   ++ +
Sbjct: 1504 KHEMTVSATDGGWVARTGYCSVTVNVIDVNDNSPVF--LPDEYLPTVLENAPSGTTVIHL 1561

Query: 74   EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
             ATD D G NA I Y++   S++ L  F IDP +GVI T G L     + Y +TV+A + 
Sbjct: 1562 NATDADSGTNAVIAYAV-QSSDSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNV 1618

Query: 132  GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
              +   +   V++ + G N   P F    Y   +SE A   + V  +  S
Sbjct: 1619 PDEERCSFATVNIQLKGTNEYVPRFVSKRYYFEISEAAPRGTLVGEVFAS 1668



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
            KF   + AR+      S    L + + D+NDN+P     P + +I    + R+I+ + A 
Sbjct: 979  KFVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAM 1038

Query: 77   DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
            D D G N +I Y I  V+    H F I+  +G I +   L   +  QY +T++++D G  
Sbjct: 1039 DKDSGPNGQIDYEI--VNGNKEHSFSINHATGEIRSIRPLDREKISQYVLTIKSSDKGSP 1096

Query: 135  SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            S  T V+V + +   N  +P F Q  +  +V E + +  TV  +T S
Sbjct: 1097 SQSTSVKVIINILDENDNAPKFSQ-IFSAHVPENSPLGYTVTRVTTS 1142



 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 12/106 (11%)

Query: 38  SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
           S+ V + D+NDN PR    P     P     G     +  +  TD D+G N+E+ YS+  
Sbjct: 796 SVLVTVTDVNDNPPRFQHHPYVTHIPSTTSPGSF---VFAVTVTDADIGPNSELHYSL-- 850

Query: 93  VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQT 138
            S     KF IDP  G I   G L    + + +V   D GG S +T
Sbjct: 851 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKD-GGPSPKT 894



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           +   V+A +K   A S    + V + DINDN+P        +++  E       +V++ A
Sbjct: 463 YTLTVLATDKGQPALSSSAEVVVVVLDINDNSPAFAQA-LYRVEMSEDTLTGTDVVQVCA 521

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG 132
            D D G N ++ Y I  V       FRID  +G + T  + +  E+   Y +TVQA D G
Sbjct: 522 ADADEGTNGQVRYGI--VDGNADQDFRIDSVTGAV-TVARPLDREKTSTYLLTVQAADRG 578

Query: 133 GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
                    VS+V    N   P F+ + Y +NV E
Sbjct: 579 STPRTDTSTVSIVLLDSNDFVPTFELSPYSINVPE 613



 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 11/175 (6%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
            LDR+     ++   + + +K   + S  V + +N+ D NDNAP+   I    + +     
Sbjct: 1076 LDRE--KISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPKFSQIFSAHVPENSPLG 1133

Query: 68   RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
              + ++  +D D+GVNA   YSI   S      F I+P +G I  +  L     ++Y I 
Sbjct: 1134 YTVTRVTTSDEDVGVNAVSRYSIIDRS----LPFTINPSTGDIVISRPLNREDTDRYRIR 1189

Query: 126  VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            V A D+G   S  +     V   N  +P F + +Y ++  E + I S V  ++ +
Sbjct: 1190 VSAHDSGWTVSTDV--TIFVTDVNDNAPRFSRPSYYLDCPELSEIGSKVTQVSAT 1242



 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 14/180 (7%)

Query: 8   NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGE 65
           +LDR+     +F   + A +    A +   ++ V ++D NDN P     M      +   
Sbjct: 664 SLDRETKE--RFVLTITATDSGSPALTGTGTVHVVVDDANDNIPTFASKMYFTAVPEDAP 721

Query: 66  ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
               ++ + A+D D   NA I+Y I      G  +F I+P +G I T+  L     + Y+
Sbjct: 722 TGTDVLLVNASDADASTNAVISYRIIG----GNSQFTINPSTGQIITSALLDRETKDNYT 777

Query: 124 ITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
           + V A+D G     SS T V V+V    N   P FQ + Y  ++    S  S V  +TV+
Sbjct: 778 LVVVASDAGSPEPLSSSTSVLVTVT-DVNDNPPRFQHHPYVTHIPSTTSPGSFVFAVTVT 836



 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 23/171 (13%)

Query: 14   PNPGKFRFQVIAREKQGTAASVPVSLTVNLN-DINDNAPRLPMIPPIQIQAGEARRQIVK 72
            P+  +  F  +  + +GT   VP  ++     +I++ APR  ++       GE       
Sbjct: 1619 PDEERCSFATVNIQLKGTNEYVPRFVSKRYYFEISEAAPRGTLV-------GE------- 1664

Query: 73   IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
            + A+D DLG + E+ Y I+   N+    F+I+ ++G I  +G L     E+ S+ V A +
Sbjct: 1665 VFASDRDLGADGEVHYLIF--GNSRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKN 1722

Query: 131  TGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
             G      + EV+V   V   N   P+F    Y V +SEG  + + V  ++
Sbjct: 1723 FGSIRGADVDEVTVNITVLDAND-PPIFSLTVYSVQISEGVPMGTHVTFVS 1772


>gi|405960423|gb|EKC26348.1| Cadherin-23 [Crassostrea gigas]
          Length = 1872

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 14/175 (8%)

Query: 2   LVVSKEN-LDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRLPMIPPI 59
           L+V++ N LD + P+  + +  ++AR+    T  S   ++ +NL D NDN P   ++   
Sbjct: 506 LIVNQANQLDYENPSMRRQQILLLARDLNNPTDHSSTATVIINLEDSNDNTPEF-LVQEY 564

Query: 60  QIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           +    E +     I+KI  +D D G N  +TYS+     TG+ KF +DP +G++ T  + 
Sbjct: 565 RASVREDQVVGTTIIKITGSDKDSGNNGLLTYSL---RGTGIEKFNVDPSTGLV-TLAQT 620

Query: 117 IAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEG 167
           +  E    Y +  +A D G  S +  V +++ V   N   P+F   +Y  +V+EG
Sbjct: 621 LDYENTPAYQLLFRAQDNGTPSREASVSLTITVLDYNDFGPIFNPPSYQTSVNEG 675



 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 13/126 (10%)

Query: 33   ASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
            +SVP  LT+ + DINDNAP    P    + +++ +    I ++ A D D GVN EI Y+I
Sbjct: 1193 SSVP--LTIQVTDINDNAPSFSSPEYSFLTVESYDLNTNIGEVRAVDRDSGVNGEIVYTI 1250

Query: 91   YHVS----NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGK--SSQTIVE 141
              V           F I   SG++ +   L        Y + V+A D G     S TIV 
Sbjct: 1251 DSVEPVPRTPEEDYFGISSESGMLYSKNSLRGASSKSPYKLVVKAQDKGSPVLMSTTIVN 1310

Query: 142  VSVVPG 147
            ++V  G
Sbjct: 1311 INVSSG 1316



 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 19/180 (10%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIE 74
            KFR +  +R+      SV  ++T+ + DINDN P+        +   E +    QI  + 
Sbjct: 1069 KFRVRAFSRDG---LRSVDANITIQVQDINDNVPQFSQ-SKYTVTVSEDKVYPYQIASVF 1124

Query: 75   ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDT 131
            A D D G  +EI YS+   S  G  KF I     ++   G  +  E   +YS+ + A D 
Sbjct: 1125 ARDLDSGSYSEIQYSL---SGQGHEKFMILKSGLLLINNGTFLDHETTPEYSLLLTAQDN 1181

Query: 132  GGKSSQTIVEVSVVP------GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
                S  + + S VP        N  +P F    Y     E   +N+ +  +      SG
Sbjct: 1182 PQALSSEVRQRSSVPLTIQVTDINDNAPSFSSPEYSFLTVESYDLNTNIGEVRAVDRDSG 1241



 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQAT 129
           + ATD D G N  ITY I+   + GL  F ID    V  ++G  +  +    Y+I +   
Sbjct: 779 VSATDQDFGSNGNITYYIW---SGGLDHFTIDQMGQVTVSSGAALDVDDVRSYNILIHGR 835

Query: 130 DTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           D G   ++  T + V++    N + P F Q  Y  ++ E  SI ++V  +
Sbjct: 836 DQGSPPRTGSTTLSVTLTDS-NNKDPFFSQQVYIGSIQETVSIGTSVLQV 884



 Score = 37.4 bits (85), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 18/183 (9%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
           LV   + LD +  N   ++    A++    +    VSLT+ + D ND  P   P  P  Q
Sbjct: 614 LVTLAQTLDYE--NTPAYQLLFRAQDNGTPSREASVSLTITVLDYNDFGPIFNP--PSYQ 669

Query: 61  IQAGEARRQI---VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
               E    I   V ++A D +   N  ITY+I    NT  + F + PR+GV+  +    
Sbjct: 670 TSVNEGETNILIPVIVKARDQESLDN--ITYTIVS-GNTIDNAFVLHPRTGVLSMS---- 722

Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
            G  Y  T Q   T   S  T    S++   N   P F Q+ Y   +SEG      V ++
Sbjct: 723 RGLNYEETPQKRGTKFLSLDT---SSLISDKNNHDPQFVQSLYTATISEGVPTGYFVKSV 779

Query: 178 TVS 180
           + +
Sbjct: 780 SAT 782


>gi|348583830|ref|XP_003477675.1| PREDICTED: protocadherin-9-like isoform 2 [Cavia porcellus]
          Length = 1203

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G   +
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 111 ETTGKLIAGEQYSITVQATDTG-GKSSQTIVEV 142
           E    L     + + V  +D G  K+  T+V V
Sbjct: 738 EEKPALTDVGLHRLVVNISDLGYPKALHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|348576472|ref|XP_003474011.1| PREDICTED: protocadherin-15-like isoform 2 [Cavia porcellus]
          Length = 1681

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 13/167 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           + F + A +  G   S PV + + + D NDN P  P I        + R    ++++ A 
Sbjct: 482 YTFSITAFD--GVQESKPVVVNIRVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAV 539

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG-- 132
           D D G N EITY I  V   G   F I+  +G+I      +LI G  Y++TVQA D    
Sbjct: 540 DADEGSNGEITYEIL-VGAQG--DFVINKTTGLITIAPGVELIVGRTYALTVQAADNAPP 596

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + S   V V V+P  N   P F Q  Y + +SE   I + +  +
Sbjct: 597 AERRQSICTVYVEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNL 643



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQY 122
           EA   + ++ ATD D G+N ++ YS+ + +N     FRI   +G I T  KL     + Y
Sbjct: 736 EANAFVGQVRATDPDAGINGQVHYSLGNFNNL----FRIT-SNGSIYTAVKLNREVRDYY 790

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V ATD       + + +++ V   +  SPVF  +TY V V E
Sbjct: 791 ELIVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEE 835


>gi|338715359|ref|XP_003363256.1| PREDICTED: protocadherin-9 isoform 3 [Equus caballus]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|332216661|ref|XP_003257468.1| PREDICTED: protocadherin-9 isoform 3 [Nomascus leucogenys]
 gi|403270577|ref|XP_003927251.1| PREDICTED: protocadherin-9 isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|301609759|ref|XP_002934429.1| PREDICTED: neural-cadherin-like [Xenopus (Silurana) tropicalis]
          Length = 2520

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------- 55
            V  ++ LDR+    G +RF V+A +++G   +    + + + DINDNAP+          
Sbjct: 1033 VFVQKALDRE--EHGLWRFVVLATDEEGEGLTGFADVIIYVVDINDNAPQFTCALSSCNA 1090

Query: 56   -----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
                 +PP          ++  ++A D +  +NA +TYS+    N  ++ F I+  +G I
Sbjct: 1091 NVYENVPP-----NTTVLEMTAVDADDKNEEINAILTYSML---NNTMNLFSINANTGTI 1142

Query: 111  ETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
             T G L     ++Y + V+  D GG ++     +SV+   N   P F Q++++  + E  
Sbjct: 1143 YTLGNLDREKNDKYVLLVKVIDGGGLATTGTATISVL-DINDHVPRFTQDSWNSVILETN 1201

Query: 169  SINSTVATITVS 180
             IN+ V  ++ S
Sbjct: 1202 DINTKVLEVSAS 1213



 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 15/156 (9%)

Query: 36  PVSLT------VNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNA 84
           P SLT      V+++DIN+N P        +  A     Q     ++++EA D D GVN 
Sbjct: 414 PSSLTSTATVIVSVDDINNNKPVFHKCASYRDHAAVLENQPPGTFVLQVEAKDADYGVNG 473

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
           ++ Y + H   T L  F I P +G+I T       +Q  Y IT++ATD   +    + ++
Sbjct: 474 QVKYGMVHKEGT-LPAFSIHPDTGIITTVQSFDREKQKEYPITIKATDQAAEPLIGLCQI 532

Query: 143 SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           ++ +   N   P F+ N Y+  + E  S+ ++   +
Sbjct: 533 NILILDENDNDPSFENNRYEYFLREDTSVGTSFLQV 568



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)

Query: 34  SVPVSLTVNLNDINDNAPRLPM--IPPIQIQA--GEARRQIVKIEATDNDLGVNAEITYS 89
           S  + L + + D+ND  P   M  +PP+ + +    A   + K++ATD D GV+ E+ Y 
Sbjct: 26  SYIIHLELTVMDVNDELPEWTMDPLPPMGVVSPNAAAGTYVYKLQATDKDEGVSGEVEYF 85

Query: 90  IYHVSNTGLHKFRIDPRSGVIETTG-KLIAGEQYSITVQATDTGG----KSSQTIVEVSV 144
           +      G  +F +D  +G I+TTG  L+  ++Y +TVQA D  G    K +  +VE+  
Sbjct: 86  LLE---GGDDRFAVDRSTGWIQTTGLPLLENKEYLLTVQAADMLGKKRFKDAIVVVEMKS 142

Query: 145 VPGPNTRSPVFQQN 158
           V    T S +  QN
Sbjct: 143 VKKLLTVSALSHQN 156



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 17/163 (10%)

Query: 33  ASVPVS----LTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEI 86
           A VP++    + +N+ D+NDN P     I    +  G      V ++ ATD DLG+N EI
Sbjct: 734 APVPLAAFTTVYINVTDVNDNVPFFTSSIYEASVTEGLGLGTFVLQVSATDQDLGLNGEI 793

Query: 87  TYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD---------TGGKS 135
           TYSI    N     F IDP++G I T           Y + ++++D          G  +
Sbjct: 794 TYSILEDRNGDHVLFHIDPQTGSIFTASVFDRETRSSYLLEIKSSDGSESARPGKHGQPN 853

Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
           S T      +   N   P F Q+ Y VNV E   +   V T+T
Sbjct: 854 SDTAYVRIFISDVNDNKPSFTQSAYYVNVDEDQDVGYIVITVT 896



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 19/160 (11%)

Query: 6    KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ--- 62
            K+ LD + P    F   +   +   ++ S      + L D NDNAP   + P +Q+    
Sbjct: 1252 KKKLDYENPQERWFNLTIKVEDPDFSSLSFCF---IELQDCNDNAPVF-LAPFVQLSPVL 1307

Query: 63   ----AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI- 117
                 G    Q++   A+D D G+N +I YSI+  S+  L +F +DP +G ++    L  
Sbjct: 1308 ENVTIGTVLTQVI---ASDADSGINGQIRYSIWPSSDV-LGEFFVDP-AGFVKVKKALDR 1362

Query: 118  -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVF 155
                QY + + A+D G  S      VS  +   N   PVF
Sbjct: 1363 EVDSQYHLVILASDEGFPSQTGSATVSFSLLDVNDNGPVF 1402



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 22/160 (13%)

Query: 27  EKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVN 83
           E+  + A V V +T    D+ND  P        +    E       ++++ ATD D G N
Sbjct: 206 EQLSSTAEVHVFIT----DVNDCIPEFQQTIYSKDNVAENAAVMTSLLQVMATDCDSGFN 261

Query: 84  AEITY----SIYHVSNTGLHKFRIDP-RSGVIETTGKLIAGEQYSITVQATDTGGKSSQT 138
           +E++Y    + + +S  G+    I P R+   E  G L     Y   + A D G K +  
Sbjct: 262 SEVSYYTESADFSISAQGI----ISPVRALDYERPGHL-----YEFVILAVDKGDKPNTG 312

Query: 139 IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              V + +   N  +P F Q  Y   VSE AS N+ +AT+
Sbjct: 313 TATVRIRISNVNDEAPEFSQTIYRTFVSEDASPNTLIATV 352



 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 10/147 (6%)

Query: 28  KQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ---IVKIEATDNDLGVNA 84
           K G   S    + + ++D+NDN P         +   E +     ++ + A D D GVNA
Sbjct: 848 KHGQPNSDTAYVRIFISDVNDNKPSFTQ-SAYYVNVDEDQDVGYIVITVTAHDPDEGVNA 906

Query: 85  EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
           +I Y I   +  G+    +DP +G I     L   E   Y +T+ A+D G       V +
Sbjct: 907 KIRYQITAGNIGGV--LDMDPDTGSIFIFQPLDYEEVQIYELTLLASD-GKWEDFATVTI 963

Query: 143 SVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           +V+   N  +PVF  N Y  +V+E  S
Sbjct: 964 NVI-NKNDEAPVFSHNEYHGHVTEEQS 989



 Score = 38.1 bits (87), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 8    NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGE 65
            NLDR+  +    ++ ++ +   G   +   + T+++ DIND+ PR        + ++  +
Sbjct: 1147 NLDREKND----KYVLLVKVIDGGGLATTGTATISVLDINDHVPRFTQDSWNSVILETND 1202

Query: 66   ARRQIVKIEATDNDLGVNAEITYSI 90
               +++++ A+D D+G NA +T+SI
Sbjct: 1203 INTKVLEVSASDEDIGENALLTFSI 1227



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQAT 129
            +++ A D D G NA ITY+    S      F+++  +G +     +      +  V AT
Sbjct: 565 FLQVAAHDADYGSNASITYA---TSGEEPMIFKVNSSTGWLYVNHSISRRPLITQEVIAT 621

Query: 130 DTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
           D G +S++  V V V    N + PV+++  Y++ V E    ++ V T+  + L
Sbjct: 622 DGGNRSTKVEVAVRVTDAQN-QPPVWEKGRYEIVVPENTVRDTAVVTVKATSL 673



 Score = 36.6 bits (83), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 12  DPPNPGK-FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA--RR 68
           D   PG  + F ++A +K     +   ++ + ++++ND AP           + +A    
Sbjct: 288 DYERPGHLYEFVILAVDKGDKPNTGTATVRIRISNVNDEAPEFSQTIYRTFVSEDASPNT 347

Query: 69  QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSIT 125
            I  + A D D      +TY I   +  G   F IDP+ G+I     L+      +Y + 
Sbjct: 348 LIATVHAFDAD---GDWVTYDIVEGNKDG--NFVIDPQKGLIRLHSSLLPSHHETEYILY 402

Query: 126 VQATD---TGGKSSQTIVEVSVVP--GPNTRSPVFQQ 157
           V ATD   +GG SS T     +V     N   PVF +
Sbjct: 403 VTATDDNSSGGPSSLTSTATVIVSVDDINNNKPVFHK 439


>gi|432866007|ref|XP_004070658.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
            [Oryzias latipes]
          Length = 3810

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 41   VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
            VN+ND+NDN+P+  + P  Q    E       +++I ATD D   N  + Y+ +     G
Sbjct: 1425 VNVNDVNDNSPQF-LSPRYQGTVSEDAPPFTSVLQISATDRDAHANGRVQYT-FQNGEDG 1482

Query: 98   LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
               F I+P SG++ T  +L       Y +T  A D G    +T V + V V   N  +PV
Sbjct: 1483 DGDFTIEPTSGIVRTVRRLDRESVPFYELTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPV 1542

Query: 155  FQQNTYDVNVSEGASINSTVATITVS 180
            F  + ++V V E +++ S V+ IT +
Sbjct: 1543 FPADDFEVLVKENSAVGSVVSQITAT 1568



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 24/194 (12%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ + + LDR+  +   FR  V A +      S    +T+ ++D ND++P        Q 
Sbjct: 862  LITTTQMLDREHMDLHHFR--VTATDHGSPRLSGTTMVTITVSDRNDHSPIFE-----QS 914

Query: 62   QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK---FRIDPRSGVIE 111
            +  E  R+       I+++ A D+D   NA I Y    V +T +     F IDPRSG+I 
Sbjct: 915  EYRETIRENVEEGYPILQLRAKDSDSPSNANIRYRF--VGDTAVMARVAFEIDPRSGLIT 972

Query: 112  TTGKLI--AGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
            T G +   + E Y++ V+A+D G   G  S T+     V   N   P F +  Y V V E
Sbjct: 973  TRGSVDRESNEHYTLHVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKE 1032

Query: 167  GASINSTVATITVS 180
                +S +  ++ +
Sbjct: 1033 DVRPHSEILRVSAT 1046



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 70   IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
            +V I ATD+D+G NA ITY +       + +FRIDP +G I    +L   +Q  Y++ + 
Sbjct: 1353 VVVISATDDDVGENARITYFL----EDNIPQFRIDPATGAITLQAELDYEDQMTYTLAIT 1408

Query: 128  ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            A D G   KS  T VEV+ V   N  SP F    Y   VSE A   ++V  I+ +
Sbjct: 1409 AKDNGIPQKSDTTYVEVN-VNDVNDNSPQFLSPRYQGTVSEDAPPFTSVLQISAT 1462



 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 2    LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
            L+ ++ ++DR+         +   + K     S  V + + + D NDN P+      +  
Sbjct: 970  LITTRGSVDRESNEHYTLHVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVA 1029

Query: 62   QAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
               + R   +I+++ ATD D   NA + Y+I  +S     +F ID  +G I+    L   
Sbjct: 1030 VKEDVRPHSEILRVSATDRDKDSNAAVHYNI--ISGNSRGQFSIDSVTGEIQVVAPLDYE 1087

Query: 118  AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            +  +Y++ V+A D G     ++  IV V V    N   P+F    +  +V E A + S++
Sbjct: 1088 SEREYTLRVRAQDNGRPPLSNNTGIVSVQVT-DVNDNPPIFVSTPFQASVLESAPVGSSI 1146

Query: 175  ATI 177
              I
Sbjct: 1147 LHI 1149



 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 36   PVSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHV 93
            PV + V + D+NDNAP  P     + ++   A   +V +I ATD D G NA+I Y I  V
Sbjct: 1526 PVHIQVTVLDVNDNAPVFPADDFEVLVKENSAVGSVVSQITATDPDEGANAQIMYQI--V 1583

Query: 94   SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQAT 129
                   F++D  SG + +   L   A  +Y I VQAT
Sbjct: 1584 EGNIPEIFQMDIFSGELTSLIDLDYEARNEYVIVVQAT 1621



 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 28/177 (15%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--------- 68
             + F V AR+      S   S+T+ + D+NDN P         +Q     R         
Sbjct: 1197 HYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEF-------LQKEYYGRLNEDAAVGT 1249

Query: 69   QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR--SGVIETTGKLIAGEQ--YSI 124
             +V + A D D  VN+ +TY I        ++F I     +G++     L   ++  Y +
Sbjct: 1250 SVVTVTAVDRD--VNSAVTYQI--TGGNTRNRFAISTAGGAGLLSLALPLDYKQERRYVL 1305

Query: 125  TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
            TV A+D   ++     +V + +   NT  PVFQ   Y V+V+E     STV  I+ +
Sbjct: 1306 TVTASD---RTLHDTCQVHINITDANTHRPVFQSAHYSVSVNEDQPPGSTVVVISAT 1359


>gi|432106012|gb|ELK32025.1| Protocadherin-9 [Myotis davidii]
          Length = 1032

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQEWFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
           F F V AR+          ++ V + D NDN+P+       Q    E       +  I  
Sbjct: 538 FIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITV 596

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG 133
           TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G 
Sbjct: 597 TDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQ 652

Query: 134 KSSQTIVEVSV-VPGPNTRSPV 154
               +  +V++ V   N  SPV
Sbjct: 653 PPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLP------M 55
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTG 114
           IP    +       ++++ ATD D+G NAEI Y     V+      F ++  +G+I    
Sbjct: 261 IP----ENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQR 316

Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVNVSE 166
            L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V +SE
Sbjct: 317 SLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPING-TVYLSE 375

Query: 167 GASINSTVATITVS 180
              +N+ +A ITVS
Sbjct: 376 KDPVNTKIALITVS 389


>gi|345328627|ref|XP_001507493.2| PREDICTED: protocadherin beta-3-like [Ornithorhynchus anatinus]
          Length = 796

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 45  DINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
           DINDNAP    M+  +QI        +V  + A D D G+N E+ Y+ +  S      F+
Sbjct: 234 DINDNAPEFTQMMYEVQIPENSPVGSLVSTVTANDFDAGINGEVLYTFFRASEAIRKTFQ 293

Query: 103 IDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVV 145
           I+P SG I+  G+L   E   Y + +QA D GG S +T V V V+
Sbjct: 294 INPISGEIKIIGQLDFEENQSYEVDIQAKDGGGLSGKTTVLVQVI 338


>gi|301754501|ref|XP_002913095.1| PREDICTED: protocadherin-9-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPP 58
           L+  + +LDR+       +  V+A +   T A   V  T+N+ D+NDNAP + +   I P
Sbjct: 311 LITVQRSLDRE--ETAIHKVTVLASDGSSTPARATV--TINVTDVNDNAPNIDLRYIISP 366

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSG 108
           I       +      +I  I  +D D  VN ++   I     +H+     +++ ++  S 
Sbjct: 367 INGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLE-TSS 425

Query: 109 VIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +++  G     +++S  + A+D+G  S +QT +    +   N   P+F Q   +++VSE 
Sbjct: 426 LLDYEGT----KEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSEN 481

Query: 168 ASINSTVATITVSRLASG 185
                 + TI+ +   SG
Sbjct: 482 NRRGLYLTTISATDEDSG 499



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   PI          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPIGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNAPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|426258401|ref|XP_004022800.1| PREDICTED: protocadherin-19 [Ovis aries]
          Length = 1122

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 20/197 (10%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
           LVV K +LDR+      + F++ A +         V L++ + D NDN P          
Sbjct: 167 LVVEK-SLDRE--TQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGESTYSVS 223

Query: 56  IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG 114
           +P    +       ++++ ATD D G N ++ YS Y +V++     F+IDP SG++  TG
Sbjct: 224 VP----ENSPPNTPVIRLNATDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTVTG 279

Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV---FQQNTYDVNVSEGA 168
            L    G  Y + VQA D G  S     +V+V V   N   PV      N+  V VSE A
Sbjct: 280 ALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSESA 339

Query: 169 SINSTVATITVSRLASG 185
                +A + VS   SG
Sbjct: 340 PPGYVIALVRVSDRDSG 356



 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 11/181 (6%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
           L+V+K+ +DRD       +  +I+ E   ++  + V + V + D+NDNAP  P    I++
Sbjct: 57  LLVTKQKIDRDLLCRQSPKC-IISLEVMSSSMEICV-IKVEIKDLNDNAPSFPAA-QIEL 113

Query: 62  QAGEARRQIVKI---EATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG---VIETTG 114
           +  EA     +I    A D D G     TY +      GL  K R D       V+E + 
Sbjct: 114 EISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSL 173

Query: 115 KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
                  YS  + A D G       V +S+ V   N  +PVF ++TY V+V E +  N+ 
Sbjct: 174 DRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGESTYSVSVPENSPPNTP 233

Query: 174 V 174
           V
Sbjct: 234 V 234


>gi|426229709|ref|XP_004008930.1| PREDICTED: protocadherin alpha-C2 isoform 1 [Ovis aries]
          Length = 949

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 8/189 (4%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI 61
           +V +++LDR+     +    ++A +      +  V L + + D+NDN P     +  IQ+
Sbjct: 194 LVLRKSLDRE--ETAEINLLLVATDGGKPELTGTVQLLIKVLDVNDNEPTFDQSVYKIQL 251

Query: 62  QAGEARRQIV-KIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAG 119
               A   +V K+ ++D D G N+EI YS    VS     KF IDP SG I T G+L   
Sbjct: 252 LENVANGTLVIKLNSSDADEGSNSEIVYSFSSDVSQNIKTKFNIDPSSGEIRTKGQLDYE 311

Query: 120 E--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
           E   Y I V A D G  S     ++SV +   N  SP     +  + + E A + S +A 
Sbjct: 312 EVKLYDIQVIAYDNGTPSMSGHCKISVKLVDINDNSPEVSITSLSLPIREDAPLGSVIAL 371

Query: 177 ITVSRLASG 185
           ITV+   SG
Sbjct: 372 ITVADRDSG 380



 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
           +  QVIA +    + S    ++V L DINDN+P + +     PI+  A      I  I  
Sbjct: 316 YDIQVIAYDNGTPSMSGHCKISVKLVDINDNSPEVSITSLSLPIREDA-PLGSVIALITV 374

Query: 76  TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKS 135
            D D G N ++T ++       L     +  S V+++     +   Y + V A D G  S
Sbjct: 375 ADRDSGANGQVTCTLIPQDLFKLVSTFKNYYSLVLDSVLDRESVANYEVVVTARDGGSPS 434

Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
                 VSV V   N  +P F Q  Y V + E
Sbjct: 435 LSATASVSVEVADVNDNAPAFAQPEYTVFLKE 466


>gi|344265578|ref|XP_003404860.1| PREDICTED: protocadherin gamma-B3-like [Loxodonta africana]
          Length = 818

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 11/148 (7%)

Query: 45  DINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH 99
           D NDN P        +  P  + AG +   ++++ ATD D GVNA+ITY+  ++      
Sbjct: 234 DANDNPPVFTQDMYRVSVPENLPAGSS---LLRVMATDPDEGVNAQITYTFINIGKAARQ 290

Query: 100 KFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
            F++D ++G + T G L   E+  Y++ V+A D G  ++   +++ ++   N  +P    
Sbjct: 291 LFKLDSKTGELTTGGGLDFEERESYTLWVEAKDGGHHTTHCKIQIDIL-DENDNAPEITL 349

Query: 158 NTYDVNVSEGASINSTVATITVSRLASG 185
            +   ++ E A + + VA I V  L SG
Sbjct: 350 ASESKHIQEDAELGTIVALIKVHDLDSG 377



 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 11/103 (10%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPP-------IQIQAGEARRQ 69
           F   + AR++   + S  VSL V ++D NDNAPR+  P + P       +  +A +    
Sbjct: 528 FELTLQARDEGLPSLSASVSLRVLVDDCNDNAPRVLYPALGPDGSALFDMVPRAAQPGYL 587

Query: 70  IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
           + K+ A D D G NA ++Y +   S  GL  F +  R+G + T
Sbjct: 588 VTKVVAVDADSGHNAWLSYHVLQASEPGL--FSLGLRTGEVRT 628



 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 19/163 (11%)

Query: 21  FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIVK-IEATDN 78
           + +    K G   +    + +++ D NDNAP + +    + IQ       IV  I+  D 
Sbjct: 315 YTLWVEAKDGGHHTTHCKIQIDILDENDNAPEITLASESKHIQEDAELGTIVALIKVHDL 374

Query: 79  DLGVNAEITYSIYHVSNTGLHKFRI--DPRSGVIETTGKLIAGE---QYSITVQATDTGG 133
           D GVN EI   +      G   F+I  D ++     T   +  E   +Y++T+ ATD G 
Sbjct: 375 DSGVNGEILCQL-----KGNSPFKIVQDTKNTYKLVTDGTLDREHMTEYNVTIMATDKGK 429

Query: 134 K--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASI 170
              SS T V + +    N  +PVFQ+ +Y V+V+E    GASI
Sbjct: 430 PPLSSSTSVTLHIA-DVNDNAPVFQKASYMVHVAENNPPGASI 471



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y +V+   LDR+  +  ++   ++A +K     S   S+T+++ D+NDNAP         
Sbjct: 402 YKLVTDGTLDRE--HMTEYNVTIMATDKGKPPLSSSTSVTLHIADVNDNAPVF-QKASYM 458

Query: 61  IQAGEAR---RQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTG 114
           +   E       IV++ A D DLG N  ++YSI    +    L  +  ++ +SG++    
Sbjct: 459 VHVAENNPPGASIVQVSAFDPDLGKNGRVSYSIVASDLEPGALSSYVSVNAQSGMV-FAQ 517

Query: 115 KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
           +    EQ   + +T+QA D G  S    V + V+
Sbjct: 518 RAFDHEQLRAFELTLQARDEGLPSLSASVSLRVL 551


>gi|332216657|ref|XP_003257466.1| PREDICTED: protocadherin-9 isoform 1 [Nomascus leucogenys]
 gi|403270573|ref|XP_003927249.1| PREDICTED: protocadherin-9 isoform 1 [Saimiri boliviensis
           boliviensis]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|229220875|gb|ACQ45373.1| protocadherin 15 precursor (predicted) [Dasypus novemcinctus]
          Length = 1626

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 19/170 (11%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKI 73
           + F + A +  G   S PV + + + D NDN P  P I         +  G++   ++++
Sbjct: 185 YTFSITAFD--GVQESEPVIVNIRVMDANDNTPTFPEISYDVYVYTDMSPGDS---VIQL 239

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDT 131
            A D D G N EITY I  V + G   F I+  +G+I      +LI G  Y++TVQA D 
Sbjct: 240 TAVDADEGSNGEITYEIL-VGSQG--DFIINKTTGLITIASGVELIVGHTYALTVQAADN 296

Query: 132 G----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
                 + S   V + V+P  N   P F Q  Y + +SE   I + +  +
Sbjct: 297 APPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNL 346



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQAT 129
           +++ATD D G+N ++ YS+ + +N     FRI   +G I T  KL     + Y + V AT
Sbjct: 446 QVKATDPDAGINGQVYYSLGNFNNL----FRIT-SNGSIYTAVKLNREVRDYYELIVVAT 500

Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
           D       + + +++ +   +  SPVF  +TY V V E     +T   I    +  G  +
Sbjct: 501 DGAVHPRHSTLTLAIKILDIDDNSPVFTNSTYTVVVEENLPAGTTFLQIEAKDIDLGANV 560


>gi|149730274|ref|XP_001494601.1| PREDICTED: protocadherin-9 isoform 1 [Equus caballus]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|410949740|ref|XP_003981576.1| PREDICTED: cadherin-9 [Felis catus]
          Length = 789

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 20/188 (10%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
           + + + LDR+  +    R + I R K G          + ++DINDN P+         +
Sbjct: 110 IHAAKKLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 168

Query: 57  PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
           P +    G +  Q+   +A D + G +A++ YSI      G   F +DP SG+I+T    
Sbjct: 169 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 223

Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
           ++    EQY + +QA D GG+    S  T V +++    N   P F Q+TY  N  E   
Sbjct: 224 MSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSPESVP 282

Query: 170 INSTVATI 177
           + + V  I
Sbjct: 283 LGTYVGRI 290



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 31/183 (16%)

Query: 20  RFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEA---RRQIVK 72
           ++QV+  A++  G    +  + TVN  L D+N+N PR P     Q  + E+      + +
Sbjct: 231 QYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSPESVPLGTYVGR 289

Query: 73  IEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSITV 126
           I+A D D+G NAE+ YSI      G   F +    D + G+I     L    +  Y++ V
Sbjct: 290 IKADDPDVGENAEMEYSI--AEGDGTDMFDVITDKDTQEGIITVKQNLDFESKMLYTLRV 347

Query: 127 QATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
            A++T         G      +V++SV  +  P    PVF +  Y + V E     S + 
Sbjct: 348 DASNTHPDPRFLHLGPFKDTAVVKISVEDIDEP----PVFSKLYYLIEVDEDVKEGSIIG 403

Query: 176 TIT 178
            +T
Sbjct: 404 QVT 406


>gi|397514467|ref|XP_003827507.1| PREDICTED: protocadherin-9 isoform 1 [Pan paniscus]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   PI          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPIGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|395834440|ref|XP_003790211.1| PREDICTED: protocadherin-9 isoform 3 [Otolemur garnettii]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|297694182|ref|XP_002824369.1| PREDICTED: protocadherin-9 isoform 1 [Pongo abelii]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|281341405|gb|EFB16989.1| hypothetical protein PANDA_000867 [Ailuropoda melanoleuca]
          Length = 1016

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 41.6 bits (96), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 23/198 (11%)

Query: 2   LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM---IPP 58
           L+  + +LDR+       +  V+A +   T A   V  T+N+ D+NDNAP + +   I P
Sbjct: 311 LITVQRSLDRE--ETAIHKVTVLASDGSSTPARATV--TINVTDVNDNAPNIDLRYIISP 366

Query: 59  IQ-----IQAGEARRQIVKIEATDNDLGVNAEITYSI-----YHVSNTGLHKFRIDPRSG 108
           I       +      +I  I  +D D  VN ++   I     +H+     +++ ++  S 
Sbjct: 367 INGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLE-TSS 425

Query: 109 VIETTGKLIAGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
           +++  G     +++S  + A+D+G  S +QT +    +   N   P+F Q   +++VSE 
Sbjct: 426 LLDYEGT----KEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSEN 481

Query: 168 ASINSTVATITVSRLASG 185
                 + TI+ +   SG
Sbjct: 482 NRRGLYLTTISATDEDSG 499



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   PI          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPIGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNAPNIDLRYIISPING-TVY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|403256576|ref|XP_003920945.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
           boliviensis]
          Length = 1087

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 10/187 (5%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
           +V  + LDR+     + R  + A +      S    + V + D NDNAP     P  ++Q
Sbjct: 688 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYVEVVDFNDNAPEFEQ-PFYRVQ 744

Query: 63  AGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
             E       ++K+ ATD D GVN EI+YS++  S+     F++D  +G I    +L   
Sbjct: 745 ISEDSPIGFLVIKVSATDADTGVNGEISYSLFQASDEISKTFKVDSLTGEIRLEKQLDFE 804

Query: 120 E--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
           +   Y I ++A D GG S +  V + V+   N  +P    + +   + E A   + VA  
Sbjct: 805 KLHSYEINIEARDAGGFSGKCTVLIQVM-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 862

Query: 178 TVSRLAS 184
           +V  L S
Sbjct: 863 SVLDLDS 869



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 6/105 (5%)

Query: 45  DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
           DINDNAP   +    ++QA E       +V + A D D G N EI Y+ ++ +   L  F
Sbjct: 234 DINDNAPEF-VQSLYEVQAPENSPVGSMVVSVSARDLDTGSNGEIAYAFFYATERILKTF 292

Query: 102 RIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV 144
           +++  SG +    +L   A + Y++T+QA D GG S +  V V V
Sbjct: 293 QLNSTSGNLYLKSELDYEAIQTYTLTIQAKDGGGLSGKCTVVVEV 337


>gi|397514471|ref|XP_003827509.1| PREDICTED: protocadherin-9 isoform 3 [Pan paniscus]
          Length = 1195

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   PI          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPIGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|348583828|ref|XP_003477674.1| PREDICTED: protocadherin-9-like isoform 1 [Cavia porcellus]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VI 110
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G   +
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDIDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 111 ETTGKLIAGEQYSITVQATDTG-GKSSQTIVEV 142
           E    L     + + V  +D G  K+  T+V V
Sbjct: 738 EEKPALTDVGLHRLVVNISDLGYPKALHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|348576486|ref|XP_003474018.1| PREDICTED: protocadherin-15-like isoform 9 [Cavia porcellus]
          Length = 1917

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 13/167 (7%)

Query: 19  FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
           + F + A +  G   S PV + + + D NDN P  P I        + R    ++++ A 
Sbjct: 455 YTFSITAFD--GVQESKPVVVNIRVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAV 512

Query: 77  DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG-- 132
           D D G N EITY I  V   G   F I+  +G+I      +LI G  Y++TVQA D    
Sbjct: 513 DADEGSNGEITYEIL-VGAQG--DFVINKTTGLITIAPGVELIVGRTYALTVQAADNAPP 569

Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
              + S   V V V+P  N   P F Q  Y + +SE   I + +  +
Sbjct: 570 AERRQSICTVYVEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNL 616



 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 65  EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQY 122
           EA   + ++ ATD D G+N ++ YS+ + +N     FRI   +G I T  KL     + Y
Sbjct: 709 EANAFVGQVRATDPDAGINGQVHYSLGNFNNL----FRIT-SNGSIYTAVKLNREVRDYY 763

Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
            + V ATD       + + +++ V   +  SPVF  +TY V V E
Sbjct: 764 ELIVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEE 808


>gi|327270435|ref|XP_003219995.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
          Length = 806

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 37  VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
           V + + + DINDN+P        ++++    R  +V K+EA D D G NA+ITYS + V 
Sbjct: 222 VQINIKVLDINDNSPHFTQSEYKVRLKENSPRNTLVTKVEARDLDFGSNAQITYSFHRVP 281

Query: 95  NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV 144
              L+ F ++  +G I   G++   ++  Y ++++ATD GG S Q  V V V
Sbjct: 282 KKILNLFNLNEMTGEIIVLGEIDYEKETSYDMSIKATDDGGLSGQCKVSVEV 333


>gi|326663971|ref|XP_001343759.4| PREDICTED: protocadherin-23-like [Danio rerio]
          Length = 3222

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 13/183 (7%)

Query: 3    VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
            +V  + LDR+  +       V  R      +S  VS  V + DINDNAP     P    Q
Sbjct: 2472 LVLCDTLDRETTDAYSLTVTVTDRGINPLNSSTVVS--VKVLDINDNAPAFSS-PEYHAQ 2528

Query: 63   AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
              E       +V++ A D DLG N  ITY+I   ++ GL    +D  +GVI+  G L   
Sbjct: 2529 VSENSPVGLVLVQVSAYDPDLGANGTITYNIISGNSKGL--ITVDSSTGVIKVNGTLDYE 2586

Query: 120  E--QYSITVQATDTGGKSSQTI---VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            E  + ++TVQA+D G    + +   V   +V   N  SP F   TY+ +VSE     + V
Sbjct: 2587 EDTKLTLTVQASDWGTSDDKKVSFAVVYILVLDENDNSPFFMFPTYNCSVSENLPAFTPV 2646

Query: 175  ATI 177
             T+
Sbjct: 2647 CTV 2649



 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)

Query: 21   FQVIAREKQGTAASVPVSLTVNLN--DINDNAPRLPMIPPIQIQAGEARRQIV-KIEATD 77
            +++I + K    A +  + TV +   D+NDN+P +P +  + I        IV ++ A D
Sbjct: 2165 YKLIIQAKDMGKAPLTGTCTVRVQVVDVNDNSPTIPSMEAVTIAENLPLGYIVTRVIAND 2224

Query: 78   NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
             DL  +A  TY +    +T    F ID  +G+I TT  L   EQ  Y++ VQA+D+    
Sbjct: 2225 VDLSPSA--TYRLIEKDDTS-RSFAIDLYTGIITTTKILDYEEQSVYTLKVQASDS---V 2278

Query: 136  SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
             QT  E+S+ V   N  SPVF Q +Y V +SE    ++ V ++  +   SG
Sbjct: 2279 HQTEAELSIQVLDVNDNSPVFSQESYQVLLSERTLADTFVVSVLATDKDSG 2329



 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 11/146 (7%)

Query: 39   LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
            L++ + D+NDN+P        Q+   E   A   +V + ATD D G N  ++Y +     
Sbjct: 2285 LSIQVLDVNDNSPVFSQ-ESYQVLLSERTLADTFVVSVLATDKDSGKNGRVSYRLLSSPV 2343

Query: 96   TGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
             G   F IDP +G + T   L     G    + V+A D+G  +   +  V + V   N  
Sbjct: 2344 GG---FYIDPDNGSVFTNKPLNYVANGNVLRLLVEARDSGDPNLFCVTSVDIEVADFNDN 2400

Query: 152  SPVFQQNTYDVNVSEGASINSTVATI 177
            +P F QN+Y +N+ E  S+ ST+ T+
Sbjct: 2401 APFFTQNSYQINIPEDVSVGSTLITL 2426



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 17/173 (9%)

Query: 9    LDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE-- 65
            LDR+  +    R Q    E  GT + S   ++  ++ D NDNAP+    P + I   E  
Sbjct: 1679 LDREIQSTFTLRVQA---EDSGTPSLSSTTTVLCSVLDENDNAPQFSQ-PDLHIVIPENL 1734

Query: 66   ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YS 123
            A   I  ++A+D D G+N  I YSI       L  F ID  +G+I TT  L   E+  YS
Sbjct: 1735 APGVIHIVQASDIDNGLNGTIQYSI-----EDLECFSIDAVTGMIRTTRPLDREERSNYS 1789

Query: 124  ITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
            + + A D G    SS  ++ +++    N  SP+F + +Y  ++SEG  + + +
Sbjct: 1790 LLITAADHGHPPLSSSALLHITLT-DENDNSPLFARKSYRASISEGLPVGTEI 1841



 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 9/183 (4%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           Y++     LDR+  +   +   V A +      S  ++  + + D+NDN P        +
Sbjct: 402 YVLCVDGPLDREIKD--LYELTVTASDYGCPPLSSVITFQIQVTDVNDNPPVFHQTIYEE 459

Query: 61  IQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
               + R    + +++ATD DLG ++EI YSI  V +     F IDP  GVI T   L  
Sbjct: 460 SIDEDVRVGTAVFRVKATDKDLGGDSEIIYSI--VQSEQKCPFNIDPTLGVITTAAALDH 517

Query: 119 GEQYSI--TVQATDTGGKS-SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
             +  +   V A+D G  S S T   +  V   N   P+F Q  Y+  V E  ++ + + 
Sbjct: 518 ERERELRFLVVASDGGSPSLSSTATVIIHVEDVNDNKPIFPQKFYNATVKEHTAVGTCIL 577

Query: 176 TIT 178
            +T
Sbjct: 578 QVT 580



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 17  GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKI 73
           G   F ++ + +     S    + + + D+NDNAP       +  + + A +   +++ +
Sbjct: 629 GLLTFDLLIKAEDQDGFSSQTFVHIGIEDVNDNAPVFNPGKYVTSVSVHA-QPGTELLNV 687

Query: 74  EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDT 131
            A+D D G   +ITY +    +  L  F +D  +G +  +  L+     S+  +V A D 
Sbjct: 688 YASDQDAGNYGKITYELQPGDSATL--FTMDQSTGSVYLSSSLMQLRSSSVKLSVSARDG 745

Query: 132 GGKSSQTIVEVSVVPGPNTRSP-VFQQNTYDVNVSEGASINSTVATI 177
           GG S+     ++V    + + P +FQ+  Y  ++SE A + S+V  +
Sbjct: 746 GGMSAAYPANITVNILQSDQPPALFQKAQYTFSISEDAPVGSSVGLV 792



 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)

Query: 45   DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI-------YHVS 94
            D NDN+P   M P       E   A   +  + A D D G    ++YSI       Y  S
Sbjct: 2619 DENDNSPFF-MFPTYNCSVSENLPAFTPVCTVHAVDEDAGTFGLLSYSIVTPCFVDYDSS 2677

Query: 95   NTGLHK-FRIDPRSGVIET--TGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
            N    + F IDP +G I T  T        +   V+A D G + +   V + +  G +  
Sbjct: 2678 NPDKKEAFGIDPLTGDIHTKQTFDYEGDRNFCFVVEARDKGDQVATLRVRIEI-EGIDEF 2736

Query: 152  SPVFQQNTYDVNV 164
            SP+F QN Y  ++
Sbjct: 2737 SPIFTQNVYHFSL 2749



 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 23   VIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDL 80
            V AR+    + S   +LTV + D+ND+ P     +     I+  +    IV++   D D 
Sbjct: 1586 VQARDNGVPSLSSTQTLTVKVLDVNDHPPVFQQHIYNTTVIENRDPGEIIVQVTTVDLDS 1645

Query: 81   GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSS 136
             VN+ ++YS+  +   G   FRI+  +G I T+ +L    Q  +++ VQA D+G    SS
Sbjct: 1646 EVNSAVSYSL--LPGPGYELFRINSHTGHISTSVRLDREIQSTFTLRVQAEDSGTPSLSS 1703

Query: 137  QTIVEVSVVPGPNTRSPVFQQ 157
             T V  SV+   N  +P F Q
Sbjct: 1704 TTTVLCSVL-DENDNAPQFSQ 1723



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 24/166 (14%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ------IV 71
           + RF V+A +    + S   ++ +++ D+NDN P    I P +      +        I+
Sbjct: 522 ELRFLVVASDGGSPSLSSTATVIIHVEDVNDNKP----IFPQKFYNATVKEHTAVGTCIL 577

Query: 72  KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---------Y 122
           ++ A D D      + Y +Y     G     + P   +   TG +   +          +
Sbjct: 578 QVTAIDADGAEFGSVQYFLY----DGFSGKDVHPFFHINSVTGNICVSQDIDYEAGLLTF 633

Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
            + ++A D  G SSQT V +  +   N  +PVF    Y  +VS  A
Sbjct: 634 DLLIKAEDQDGFSSQTFVHIG-IEDVNDNAPVFNPGKYVTSVSVHA 678



 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 18   KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARR-QIVKIEA 75
            K +  V+A     TA +    + + L DINDNAP          +  G+     ++++ A
Sbjct: 2062 KVQLVVLAENGHQTAYA---RVAITLQDINDNAPVFKQSYYRTAVWEGQIHNTYVMQVLA 2118

Query: 76   TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTG 132
            TD+D GVN +I+Y I   ++   + F ID   G++ T   L       Y + +QA D G
Sbjct: 2119 TDSDSGVNGQISYFIMDGNHN--NAFVIDSVRGILATNAVLDREIVSSYKLIIQAKDMG 2175



 Score = 39.3 bits (90), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 19/150 (12%)

Query: 45   DINDNAPRLPMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSI--------YHVSN 95
            DINDN+P    +    + +  E    +  + A D D G N  +TYS+        +H+ +
Sbjct: 1505 DINDNSPTFVSMDIACVPEDTEVGLLVHHVMAKDKDEGRNGHVTYSVSSGNEKSYFHMES 1564

Query: 96   TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV 154
            TG H F        + ++    +   + + VQA D G  S  +   ++V V   N   PV
Sbjct: 1565 TG-HLF--------LNSSLDYESQHVHILIVQARDNGVPSLSSTQTLTVKVLDVNDHPPV 1615

Query: 155  FQQNTYDVNVSEGASINSTVATITVSRLAS 184
            FQQ+ Y+  V E       +  +T   L S
Sbjct: 1616 FQQHIYNTTVIENRDPGEIIVQVTTVDLDS 1645



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 11/138 (7%)

Query: 45   DINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRID 104
            +I ++AP+   +  IQ++A   R Q       +  +     ITYS+  +S  G+  FRI 
Sbjct: 986  EIGESAPKDTRM--IQVRAHGNRSQHTGTSGKETSV-----ITYSLKPLS--GVPPFRIH 1036

Query: 105  PRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDV 162
            P +G +  +  L    +  Y   V A     K   T   V +V   N  +PVF ++ Y  
Sbjct: 1037 PETGWMFVSQSLDYETEPSYRFCVCAKAQNSKMEATATVVVMVQDENDNAPVFSRDVYFF 1096

Query: 163  NVSEGASINSTVATITVS 180
            +V EG S +  + T+  S
Sbjct: 1097 SVQEGPSPHGLIGTVKAS 1114



 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)

Query: 45   DINDNAPRLPMIPPIQIQAGEA----RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
            D+NDN P+   +P  +     A       ++ + A D D G N  + +S+   ++  L  
Sbjct: 1184 DVNDNRPQFTHMPSTKELNVWAVIPVNSVVISMFAKDLDAGENGTVKFSM---TDNQLGH 1240

Query: 101  FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            F ID  SG ++ T +  +  Q  Y++ V ATD G
Sbjct: 1241 FSIDSLSGDVKVTSQFSSNPQMRYTLRVVATDNG 1274


>gi|380783507|gb|AFE63629.1| protocadherin-9 isoform 2 precursor [Macaca mulatta]
          Length = 1203

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPVFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   P+          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNTYDVN 163
               L   E   + +TV A+D     ++  V ++V       P  + R  +   N   V 
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGT-VY 372

Query: 164 VSEGASINSTVATITVS 180
           +SE   +N+ +A ITVS
Sbjct: 373 LSEKDPVNTKIALITVS 389


>gi|114649998|ref|XP_001139491.1| PREDICTED: protocadherin-9 isoform 5 [Pan troglodytes]
 gi|410219408|gb|JAA06923.1| protocadherin 9 [Pan troglodytes]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDSGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   PI          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPIGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


>gi|426375633|ref|XP_004054632.1| PREDICTED: protocadherin-9 isoform 1 [Gorilla gorilla gorilla]
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
           YL+ +   LD +     +F F+++A +    + +    + V L D NDN P     P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475

Query: 61  IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
           +   E  R+   +  I ATD D G NA+I Y +          F +D ++GV+  +    
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531

Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
             EQ  +  TV A D G     SQ  V V+V+   N  SP F  N +   VSE     ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590

Query: 174 VATITVSRLASG------CAIMNKEEN 194
           V  ITV+   +G       +I+N  +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 1   YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
           Y  V K N+  D      + F V A +      S    +T+N+ D+NDN+P +   P   
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682

Query: 58  -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
                P+    G     + ++ A D D G+NAE+ Y+I   +N GL  FRIDP +G I  
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737

Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
             K    +   + + V  +D G  KS  T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770



 Score = 40.0 bits (92), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 18  KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
           +F F V AR+          ++ V + D NDN+P+       Q    E       +  I 
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595

Query: 75  ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
            TD D G N  +T SI + ++     F +DP SGVI++       +Q  Y+  V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651

Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
                +  +V++ V   N  SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674



 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 36/200 (18%)

Query: 3   VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
           ++ ++NLDR+  +    + +V   E  GT   S    L V ++D+NDN P          
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260

Query: 53  LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
           +P   PI          ++++ ATD D+G NAEI Y     V+      F ++  +G+I 
Sbjct: 261 IPENAPIGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313

Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
               L   E   + +TV A+D     ++  V ++V       P  + R   SP+      
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369

Query: 161 DVNVSEGASINSTVATITVS 180
            V +SE   +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.312    0.129    0.355 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,939,557,323
Number of Sequences: 23463169
Number of extensions: 114889303
Number of successful extensions: 289785
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 6291
Number of HSP's that attempted gapping in prelim test: 231644
Number of HSP's gapped (non-prelim): 39930
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)