BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5884
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 23/186 (12%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
+ + S++ LDR+ + K+ +V A + + ASVPV + V DINDN+P+ +
Sbjct: 2966 WRISSRKTLDRE--HIAKYLLRVTASDGK-FQASVPVEVFVV--DINDNSPQCSQL---- 3016
Query: 61 IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
+ G+ R I+K+ A D D+ NA+ITYS++ G +F++DP +G + TT
Sbjct: 3017 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLH---GPGAQEFKLDPHTGEL-TTL 3072
Query: 115 KLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASIN 171
++ E+ Y++ +ATD GG+S Q V + + N +P F + DV V + ++
Sbjct: 3073 TVLDRERKDVYNLVAKATDGGGQSCQAEVTLH-IEDVNDNAPRFFPSHCDVAVFDNTTVK 3131
Query: 172 STVATI 177
+ VA +
Sbjct: 3132 TPVAVV 3137
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+ + + LDR+ N ++ +V ++ + + V + D+NDN P +
Sbjct: 1193 LLTTAKQLDRE--NKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSH-KLFNV 1249
Query: 62 QAGE-----ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ E + + ++ A+D D G+N +TYSI + FRIDP +GV+ ++
Sbjct: 1250 RLSERLSPLSPEPVYRLVASDPDEGLNGSVTYSI---EESDEESFRIDPVTGVVSSSSTF 1306
Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSV--VPGPNTRS-PV-FQQNTYDVNVSEGASINS 172
AGE +T++ATD+G + T V + + +P P S P+ F ++ Y V E +N
Sbjct: 1307 AAGEYNILTIKATDSGQPALSTSVRLHIEWIPQPRPSSIPLSFDESYYSFTVMETDPVNH 1366
Query: 173 TVATITV 179
V I+V
Sbjct: 1367 MVGVISV 1373
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 41 VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
V++ D+NDN P +P IQ G E + ++ ATD DLG N +TY
Sbjct: 2058 VSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGSVTYGF----AEDY 2113
Query: 99 HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
FRIDP G I A +Y + V A D+G QT VEV V N +P+FQ
Sbjct: 2114 AYFRIDPYVGDISLKKPFDYQALNKYHLRVIARDSGIPPLQTEVEVHVTVR-NKSNPLFQ 2172
Query: 157 QNTYDVNVSEGASINSTV 174
Y V V E ++ + +
Sbjct: 2173 SPYYKVKVPENITLYTPI 2190
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK-----IEA 75
+ ++A+ G S +T+++ D+NDNAPR P VK + A
Sbjct: 3083 YNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRF---FPSHCDVAVFDNTTVKTPVAVVFA 3139
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGG 133
D D G NA++ YS+ +++ +F ID SGVI E ++ A +TV+A+D G
Sbjct: 3140 RDPDQGANAQVVYSL---TDSADGQFSIDATSGVIRLEKPLQVRASSAVELTVRASDLGT 3196
Query: 134 K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
S+ V VSVV G P+F + V E A I+ V AT+T
Sbjct: 3197 PIPLSTLGTVTVSVV-GLEDYLPIFLNAEHSTQVPEDAPIDMEVLHLATLT 3246
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEA 75
FR +V A +K + + VN++DINDN P+ P + ++K++A
Sbjct: 2344 HFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCGHLVLKVQA 2403
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
D D+G + + Y I +S F I+ SG+I K Y++ V A+D G
Sbjct: 2404 LDPDIGDTSRLEYLI--LSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASD--G 2459
Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
T+ N SP FQQN Y+ ++E A + + V
Sbjct: 2460 VFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 16 PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
P + V+ R+++ V +T+++ D N ++P + P G ++
Sbjct: 1518 PSQHILTVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQLRYEANVPDTTAPG---TEL 1574
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQA 128
+++ A D D G NAEI YS ++ G F ID G+I +L + ++++TV+A
Sbjct: 1575 LQVRAVDADRGANAEIHYSFLKGNSDGF--FNIDSLLGIITVAQRLYHVHLTRHALTVKA 1632
Query: 129 TDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
D G + +V + V P ++ +PVF ++ Y + + E I S + ++
Sbjct: 1633 EDQGSPRRHDLALVVIHVHPS-DSSAPVFSKDEYFIEIPESVPIGSPILLLS 1683
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 38 SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ +N+ D+N++ PR + ++ I+ + A+D+D VN+ ITYS+ V
Sbjct: 3308 TIVINVTDVNEHHPRFTHDLYTVRVLENAVVGDVILTVSASDDDGPVNSAITYSL--VGG 3365
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
L F I+P+ G ++ K + EQ YS+ ++ATD+G EV+V V N
Sbjct: 3366 NQLGHFTINPKKGKLQ-VAKALDWEQTPSYSLRLRATDSGQPPLHEDTEVAVEVVDVNDN 3424
Query: 152 SPVFQQNTYDVNVSEGASINSTVATITV 179
P F Q Y +V E + I V + +
Sbjct: 3425 PPRFFQLNYSTSVQENSPIGIKVLQLIL 3452
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
+ + + LDR+ +V+AR+ G A V + L D NDNAP+ + I
Sbjct: 2537 ITTLQKLDRENSTERVIAIKVMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 2594
Query: 62 QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
+ +R I+++ A D D G NA++TYS+ + ++P +GV++ L+ E
Sbjct: 2595 PSNVSRDSPIIQVLAYDADEGRNADVTYSVDSTEDLAEEIIEVNPTTGVVKVKESLVGLE 2654
Query: 121 QYSI--TVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEGASINS 172
++ ++A D G ++V V + +P P P++ + + ++ EG+ I S
Sbjct: 2655 NRAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEIPLPKFSEPLYTFSAPE-DLPEGSEIGS 2713
Query: 173 TVA 175
A
Sbjct: 2714 VKA 2716
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 37 VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
VS+++ + D+NDN P P + ++++ A D D G + +++Y +
Sbjct: 2783 VSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 2842
Query: 95 NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
+ +H+ F +D SG I T +L Q Y V A D G SSQ +VEVS+
Sbjct: 2843 GSNIHELFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSIT-DE 2901
Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATI 177
N P F Y +V E VAT+
Sbjct: 2902 NDNPPRFASEDYRGSVVENNEPGELVATL 2930
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
+ V+A ++ S + + + DINDN P + P+ P ++ ++++EA
Sbjct: 1103 YWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTSVLQLEAW 1162
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
D D ++T+++ S L F + P +G++ T +L ++Y + V D G
Sbjct: 1163 DPDSSSQGKLTFNL--TSGNHLGHFIVHPFTGLLTTAKQLDRENKDEYVLEVTVQDNGDP 1220
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
S ++ V V + N P+F ++V +SE S
Sbjct: 1221 SLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLS 1256
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 38 SLTVNLNDINDNAPRLP-MIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ V + DINDN P ++ + G A+ ++++ A+D D G N +++Y I +
Sbjct: 2257 TVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGS 2316
Query: 96 TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
FRI+ +G I T +L + + + V+A D G + +T+V V+ V N
Sbjct: 2317 DVSKFFRINGSTGEIFTIQELDYETHQHFRVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375
Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
P F++ Y+ NVSE A+ V +
Sbjct: 2376 PPKFREPQYEANVSELATCGHLVLKV 2401
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
++ + ATD D G N ITYSI + F IDP GVI TT + + Y+ V
Sbjct: 477 VLTVTATDQDHGDNGHITYSI---AGPKAVPFSIDPLLGVISTTKPMDYELMKRIYTFRV 533
Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+A+D G Q EVSV + N P+F++ V++ + + ++ ++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLKNLNDNQPMFEEVNCTVSLRQDVPVGKSIMAVS 587
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
+ V++ D ND P L P ++ E R I K+ ATD DLG NAE Y+ N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDRPLKSPICKVTATDADLGQNAEFYYAF----N 188
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQ 137
F I P SGV+ GKL +Y + V A D K S+
Sbjct: 189 ARSEVFAIHPTSGVVTVAGKLNVTRRGKYELQVLAVDRMRKISE 232
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTG--KLIAG-EQYSI 124
++++++ATD D G + Y+I + G + F++DP SGV+ T G +L +G Q+ +
Sbjct: 1466 ELLRVQATDQDHGKG--LIYTILSSQDPGSANLFQLDPSSGVLVTVGTLELHSGPSQHIL 1523
Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
TV D + V V++ V N SP F Q Y+ NV +
Sbjct: 1524 TVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQLRYEANVPD 1566
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 34/188 (18%)
Query: 11 RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RLPMIPPIQIQA 63
RD P G F V L V L DINDN P RL + P +
Sbjct: 896 RDQPTKGHQLFSV-------------TDLIVTLEDINDNPPQCITEHRRLKV--PEDMPL 940
Query: 64 GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ-- 121
G + ++A+D DLG E+ Y + ++ F++ P +G + +L +
Sbjct: 941 GTV---LTFLDASDPDLGPAGEVKYILVEDAHG---TFQVHPMTGALSLEKELDFERRAG 994
Query: 122 YSITVQATDTGGK-SSQTIVEVSVV---PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
Y+++ A+D+G S +T+ V V+ N SP F Y V E + + V +
Sbjct: 995 YNLSFWASDSGKPLSRRTLCHVEVLVMDVNENLHSPHFSSFVYQGQVQENSPAGTPVMVV 1054
Query: 178 TVSRLASG 185
T SG
Sbjct: 1055 TAQDDDSG 1062
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
L F D ++GV+ TG L + ++ TV+ATDT G S+ VEV +V N P
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2271
Query: 155 FQQNTYDVNVSEGASINSTVATITVSRLASG 185
F Q Y +VSEG+ + V + S SG
Sbjct: 2272 FSQLVYTTSVSEGSPAQTPVIQLLASDQDSG 2302
Score = 37.0 bits (84), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
++ + A D+D G++ E+ Y + + TGL F I+ +G++ET L Y +TV
Sbjct: 1051 VMVVTAQDDDSGLDGELQYFLR--AGTGLETFSINQDTGMLETLAPLDREFTPYYWLTVL 1108
Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
A D G + EV + V N P + + +V E A + ++V +
Sbjct: 1109 AVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTSVLQL 1159
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 43 LNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
L I++ AP +I GE +V + A+D+D N+ + Y I + L F+
Sbjct: 1764 LGHISEAAPLHSLI------LGEDNSPLV-VRASDSDREANSLLVYKI--LEPEALKFFK 1814
Query: 103 IDPRSGVIETTGKLIAGE----QYSITVQATDT----GGKSSQTIVEVSVVPGPNTRSPV 154
IDP G + TT +L + Q++I V T +S++ I+ V V N P
Sbjct: 1815 IDPSMGTLTTTSELDFEDTPLFQFNIYVHDQGTPILFAPRSAKVIIHVRDV---NDSPPR 1871
Query: 155 FQQNTYDVNVSE 166
F + Y+V V E
Sbjct: 1872 FSEQIYEVAVVE 1883
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
LTV + D NDN PR PP Q E I +++ D D N + Y++
Sbjct: 806 LTVTVKDWNDNPPRF---PPGGYQLTISEDTEVGTTIAELKTEDADSEDNRRVRYTLL-- 860
Query: 94 SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
T KF + P +G + TG L + QY + +A D K Q
Sbjct: 861 --TPTEKFSLHPFTGELVVTGHLDRESESQYILKAEARDQPTKGHQ 904
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 101 FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
F+++ R+G+I TT + EQ + + G+++ T++ + +V N +PVF +++Y
Sbjct: 406 FKLNARTGLITTTKLVDFHEQNQYQLHVKTSLGQATTTVI-IDIVDC-NNHAPVFNRSSY 463
Query: 161 DVNVSEGASINSTVATITVS 180
+ + E ++V T+T +
Sbjct: 464 EGTLDENIPPGTSVLTVTAT 483
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
+ ++ ATD D G + ++ Y I + G F I+ +G++ L Y + V
Sbjct: 734 LARLAATDPDTGFHGKLVYVISDGNEEGC--FDIELETGLLMVAAALDYETTSFYVLNVT 791
Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
D G KSS ++ V+V N P F Y + +SE + +T+A +
Sbjct: 792 VYDLGTPPKSSWKLLTVTVKDW-NDNPPRFPPGGYQLTISEDTEVGTTIAEL 842
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYS 89
VS+++ L ++NDN P ++ + RQ I+ + A D D N + Y
Sbjct: 548 VSVSLRLKNLNDNQPMFE-----EVNCTVSLRQDVPVGKSIMAVSAIDMDELQN--LKYE 600
Query: 90 IYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYSITVQATDTGGKSSQTIVEVSV 144
I VS F ++ SGVI + YS+ + A+D +S T ++V+V
Sbjct: 601 I--VSGNEQDYFHLNHFSGVISLKRSFMNLTAVRPTIYSLKITASDGKNYASPTTLKVTV 658
Query: 145 VPGPNTRSPV 154
V P++ PV
Sbjct: 659 VKDPHSEVPV 668
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 91 YHVSNTGLH-KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
YH++ KFR+D +G++ G L +Y ++++ + S + + + V
Sbjct: 3255 YHITGGNEQGKFRLDAHTGILYVNGSLDFETNPKYFLSIECSRKSSSSLSDVTTIVINVT 3314
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
N P F + Y V V E A + + T++ S
Sbjct: 3315 DVNEHHPRFTHDLYTVRVLENAVVGDVILTVSAS 3348
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 81 GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQT 138
G ++E+TY + + + F ++ SG+I T +L + Y + ++ ++ G ++
Sbjct: 1685 GSSSEVTYELREGNKDSV--FSMNSYSGLISTQKRLDHEKVPSYRLRIRGSNMAGVFTEV 1742
Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
+ V ++ N P F + T+ ++SE A ++S + S L + ++E NS
Sbjct: 1743 VALVYII-DENDNPPAFGKPTFLGHISEAAPLHSLILGEDNSPLVVRASDSDREANS 1798
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
+ + E LDR+ P +++A++ G A V+ V L D NDNAP+ + I
Sbjct: 2548 IFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVN--VILTDDNDNAPQFRATKYEVNI 2605
Query: 62 QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA-- 118
+ A+ +VK+ A+D D G NA+ITY+I S + I+ SGVI T LI
Sbjct: 2606 GSSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVITTKESLIGLE 2665
Query: 119 GEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
E ++ V+A D G S +++V V V + P + P F + Y VSE I + + I
Sbjct: 2666 NEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTEIDLI 2725
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 38 SLTVNLNDINDNAPRLPM-----IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
++ V++ DINDN P I G +++++ A D+ NAEITYSI
Sbjct: 3215 TVIVSVLDINDNPPVFEYREYGATVSEDILVG---TEVLQVYAASRDIEANAEITYSI-- 3269
Query: 93 VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
+S KF ID ++G + L + +Y +TV+ATD G S + V+V V N
Sbjct: 3270 ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329
Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATI 177
+PVF Q+TY +SE A + +V T+
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITV 3357
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 39 LTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
+ VN++D ND+AP ++ ++++ A D D G NAE+ YSI N
Sbjct: 1548 IVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSI-ESGNI 1606
Query: 97 GLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
G + F IDP G I+T +L Q Y + V+ATD G I V + V + SP
Sbjct: 1607 G-NSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASP 1665
Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLAS 184
F Y V +SE SI S V +T +S
Sbjct: 1666 KFTSKEYSVELSETVSIGSFVGMVTAHSQSS 1696
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 19/173 (10%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
+ V K+ LDR+ + + + A + GT +S + + V + D NDN+P
Sbjct: 2976 WKVYVKKPLDREKRD--NYLLTITATD--GTFSSKAI-VEVKVLDANDNSPVCEKTLYSD 3030
Query: 58 --PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK 115
P + G + I++I ATD D+ NAEITY++ +G KF+++P +G ++T+
Sbjct: 3031 TIPEDVLPG---KLIMQISATDADIRSNAEITYTLL---GSGAEKFKLNPDTGELKTSTP 3084
Query: 116 LIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
L EQ Y + V+ATD GG+ Q + V + N +P F + Y + V E
Sbjct: 3085 LDREEQAVYHLLVRATDGGGRFCQASI-VLTLEDVNDNAPEFSADPYAITVFE 3136
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
++ + + LDR+ + + V A ++ S + + + + D+NDNAP+ P+ P
Sbjct: 1090 VIETSDRLDRE--STSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPE 1147
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
++ +V+IEA D D N ++ Y I + G F I P++G+I TT + +
Sbjct: 1148 IMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGF--FSIHPKTGLITTTSRKLDR 1205
Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
EQ + + V TD G TI V V + N P F Q Y + + E
Sbjct: 1206 EQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPE 1256
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 41 VNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
V + D NDN P RLP + R + + ATD D G NAEI+YSI
Sbjct: 1233 VKILDENDNKPQFLQKFYKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVV--PG 147
+ G KF I+P++GV+ + AGE ++++A D G KSS T + + + P
Sbjct: 1293 DGNEHG--KFFIEPKTGVVSSKRFSAAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPK 1350
Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
P+ F+++ + V E + + I+V
Sbjct: 1351 PSLEPISFEESFFTFTVMESDPVAHMIGVISV 1382
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDN 78
+ ++ R G S+ + L D+NDNAP P + E + +++ATD
Sbjct: 3093 YHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSS 136
D G+N +I YS+ ++ +F I+ SG+I+ L Q Y+++++A D G
Sbjct: 3153 DAGLNRKILYSLIDSADG---QFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRR 3209
Query: 137 QT---IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
T V VSV+ N PVF+ Y VSE + + V +
Sbjct: 3210 LTATGTVIVSVL-DINDNPPVFEYREYGATVSEDILVGTEVLQV 3252
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 7 ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
ENLD + + ++ V A + + S ++ VN+ DINDN P + + +A
Sbjct: 3291 ENLDYESSH--EYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDA 3348
Query: 67 --RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--- 121
+ ++ + A D D N+ I YSI N G F IDP G ++ T KL+ E
Sbjct: 3349 VLEQSVITVMADDADGPSNSHIHYSIID-GNQG-SSFTIDPVRGEVKVT-KLLDRETISG 3405
Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
Y++TVQA+D G V++ V N +PVF + Y V + E + +V + V+
Sbjct: 3406 YTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVT 3465
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 19 FRFQVIAREKQGTAASVP-VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEA 75
++F ++AR Q V V +++ + D NDN+P P ++ ++++I A
Sbjct: 2774 YQFSILARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRA 2833
Query: 76 TDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
+D D G N ++ YS+ + + F I+ +G I T +L ++ Y I V A+D G
Sbjct: 2834 SDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2893
Query: 133 GK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
K SS IV+V+V N P F Y VSE +A ++ +
Sbjct: 2894 EKIQLSSTAIVDVTVT-DVNDSPPRFTAEIYKGTVSEDDPQGGVIAILSTT 2943
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 31 TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEIT 87
T A V + + ++DINDN P + EA +V++ ATD+D N I+
Sbjct: 2261 TGAHAEVFVDIIVDDINDNPPVFAQ-QSYAVTLSEASVIGTSVVQVRATDSDSEPNRGIS 2319
Query: 88 YSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVS 143
Y ++ + F +D +G+I L + Q++I V+A D G SS IV V
Sbjct: 2320 YQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVD 2379
Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGA 168
V N P+F+Q Y+ +SE A
Sbjct: 2380 VT-DLNDNPPLFEQQIYEARISEHA 2403
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGVNAEITY 88
V +TV++ D+NDN P + Q EAR + ++A D D ++ Y
Sbjct: 2374 VIVTVDVTDLNDNPPLF------EQQIYEARISEHAPHGHFVTCVKAYDADSSDIDKLQY 2427
Query: 89 SIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
SI +S F ID +G+I + + YS+ + +D G S T V V+V+
Sbjct: 2428 SI--LSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSD-GVFRSSTQVHVTVIG 2484
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
G N SP F QN Y+V ++E A +++ V + + SG
Sbjct: 2485 G-NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSG 2522
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP-IQIQAGEAR 67
LDR+ + + + + ++ V + V+L D+NDN P IPP +++ E
Sbjct: 883 LDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF--IPPNYRVKVREDL 940
Query: 68 RQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
+ I+ +EA D DLG + ++ YS+ + G F +D SG + +L ++ Y
Sbjct: 941 PEGTVIMWLEAHDPDLGQSGQVRYSLL---DHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Query: 123 SITVQATDTGG----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
++TV+A D G S+ + V N PVF V E A + S V T++
Sbjct: 998 NLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVS 1057
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI----AGEQYSIT 125
+++++ TD D G+ +TY I V++ +F I+ R G I T KL A + S+
Sbjct: 2511 VMEVKTTDGDSGIYGHVTYHI--VNDFAKDRFYINER-GQIFTLEKLDRETPAEKVISVR 2567
Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
+ A D GGK + V V ++ N +P F+ Y+VN+ A+ ++V + S G
Sbjct: 2568 LMAKDAGGKVAFCTVNV-ILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2626
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHVSN 95
L V + D NDN P + ++ E + +I+++EATD DLG N +TYSI ++
Sbjct: 808 LHVVVVDANDNPPEF-LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIVTDTD 866
Query: 96 TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
T F ID +GV+ L ++S+ ++A D + Q V V + N
Sbjct: 867 T----FSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVND 922
Query: 151 RSPVFQQNTYDVNVSE 166
P F Y V V E
Sbjct: 923 NPPTFIPPNYRVKVRE 938
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
NTG F I+P SG I T K + E Y++ +Q T+ G S+ T V V + N
Sbjct: 1705 NTG-DAFDINPHSGTI-ITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHL-QDENDN 1761
Query: 152 SPVFQQNTYDVNVSEGASINSTVAT 176
+PVF Q Y +SE ASINS V T
Sbjct: 1762 APVFMQAEYTGLISESASINSVVLT 1786
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 67 RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSI 124
R I ++ ATD D+G N E YS ++ F I P SGVI TG+L + + Y +
Sbjct: 165 RTSIARVSATDADIGTNGEFYYSFKDRTDM----FAIHPTSGVIVLTGRLDYLETKLYEM 220
Query: 125 TVQATDTGGK 134
+ A D G K
Sbjct: 221 EILAADRGMK 230
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGE 65
+LD + + F QV A ++TV++ DIND P P+ +
Sbjct: 1834 SLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTY 1893
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSIT 125
+++ + ATD D +++ YSI N G KF +D ++G + +Y +T
Sbjct: 1894 KGVKVITVNATDADSSAFSQLIYSITE-GNIG-EKFSMDYKTGALTVQNTTQLRSRYELT 1951
Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
V+A+D G + T V+++V + F Q+ Y V E ++ T+A IT
Sbjct: 1952 VRASD-GRFAGLTSVKINVKESKESHLK-FTQDVYSAVVKENSTEAETLAVIT 2002
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNT----GLHKFRIDPRSGVIETTGKLI--AGEQY 122
+I++I A D D E IY + ++ L KFR+DP +G + T+ KL A Q+
Sbjct: 1474 EILQISAVDQD-----EKNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQH 1528
Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
++TV D + + V V N +P F ++Y V E A++ S V +T
Sbjct: 1529 TLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVT 1585
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 44 NDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK 100
+ +N + P+ P IQ E + ++ + +TD D G N ++ Y++ +
Sbjct: 707 HSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSC-- 764
Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQ 156
F ID +G+++ L ++Y++ + D G K++ ++ V VV N P F
Sbjct: 765 FMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDA-NDNPPEFL 823
Query: 157 QNTYDVNVSEGASINSTV 174
Q +Y V VSE ++S +
Sbjct: 824 QESYFVEVSEDKEVHSEI 841
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
++ + A D D + EI YSI S G+ F+I +GVIET+ +L + Y +TV
Sbjct: 1053 VMTVSAHDEDARRDGEIRYSIRDGSGVGV--FKIGEETGVIETSDRLDRESTSHYWLTVF 1110
Query: 128 ATDTGGKSSQTIVEVSVV------PGPNTRSPVF 155
ATD G + +E+ + P T PV+
Sbjct: 1111 ATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY 1144
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 100 KFRIDPRSGVIETTGKLI--AGEQYSITVQATDT-GGKSSQTIVEVSVVPGPNTRSPVFQ 156
+F I+ +GVI L A Y ++++ATD+ G ++ V++ +V N PVF
Sbjct: 2226 QFTINFNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAHAEVFVDI-IVDDINDNPPVFA 2284
Query: 157 QNTYDVNVSEGASINSTVATI 177
Q +Y V +SE + I ++V +
Sbjct: 2285 QQSYAVTLSEASVIGTSVVQV 2305
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 20/153 (13%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ----IVKIEATDNDLGVNAEITYSIYHVS 94
LTV++ N+ AP +I + + E R IV ++ D D G N +I S+ V+
Sbjct: 243 LTVHIEQANECAP---VITAVTLSPSELDRDPAYAIVTVD--DCDQGANGDIA-SLSIVA 296
Query: 95 NTGLHKFR-IDPRSGVIETTGKLIAGEQ-------YSITVQATDTGGKSSQTIVEVSVVP 146
L +FR + G E K I G Y++T+QA D G + V+V V
Sbjct: 297 GDLLQQFRTVRSFPGSKEYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQFSSVKVIHVT 356
Query: 147 GPNTRS-PV-FQQNTYDVNVSEGASINSTVATI 177
P ++ PV F+++ Y +SE A N+ V +
Sbjct: 357 SPQFKAGPVKFEKDVYRAEISEFAPPNTPVVMV 389
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 35 VPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
V V T+ LN++NDN P I P + GE QI + A D D E+
Sbjct: 551 VEVLATITLNNLNDNTPLFEKINCEGTIPRDLGVGE---QITTVSAIDAD-----ELQLV 602
Query: 90 IYHV-SNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGP 148
Y + + L F ++P SGV+ L+ G G K S + ++ G
Sbjct: 603 QYQIEAGNELDFFSLNPNSGVLSLKRSLMDG-----------LGAKVSFHSLRITATDGE 651
Query: 149 NTRSPVF 155
N +P++
Sbjct: 652 NFATPLY 658
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
V++ E LDR+ P G + R G + ++ V + D NDNAP+ + +
Sbjct: 2552 VITTERLDRENPLEGDV--SIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2609
Query: 62 QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
+A R +V +++A D D G N+ ITYS+Y ++ + IDP +G + T G +
Sbjct: 2610 RADVGRGHLVTQVQAIDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2669
Query: 118 AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
S V+A D G K S V + V+P P T P F Q+ Y ++E +I STV
Sbjct: 2670 KNTVLSFFVKAVDGGIPVKHSLIPVYIHVLP-PETFLPSFTQSQYSFTIAEDTAIGSTVD 2728
Query: 176 TITV 179
T+ +
Sbjct: 2729 TLRI 2732
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 41 VNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
V+++D+NDN+P + + + + + I+K+ A D D+G N I YS+Y N+
Sbjct: 3017 VSVSDVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGSNGYIRYSLYGSGNS-- 3074
Query: 99 HKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
+F +DP SG ++T L+ E+ YS+ +ATD GG+ Q+ + + ++ N PVF
Sbjct: 3075 -EFFLDPESGELKTLA-LLDRERIPVYSLMAKATDGGGRFCQSNIHL-ILEDVNDNPPVF 3131
Query: 156 QQNTYDVNVSEGASINSTVATI 177
+ Y+ V E + + + +
Sbjct: 3132 SSDHYNTCVYENTATKALLTRV 3153
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
++ + E LD + + K ++ R+++ + VN+ D ND++P P+
Sbjct: 1517 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1574
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
++ ++++ A D D G NAE+ Y+I NTG + F+I+P G+I + +
Sbjct: 1575 VFESAALGSAVLQVTALDKDKGENAELIYTI-EAGNTG-NMFKIEPVLGIITICKEPDMT 1632
Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
Q+ ++++ TD G S+ IV +SV N+ P F Y V+E I ++V
Sbjct: 1633 TMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSH-PKFIHKDYQAEVNENVDIGTSVI 1691
Query: 176 TIT 178
I+
Sbjct: 1692 LIS 1694
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 42 NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
N+ DINDN+P LP +Q+ A E I ++ A D D G N E+TY V
Sbjct: 2073 NIEDINDNSPVFVGLPYYAAVQVDA-EPGTLIYQVTAIDKDKGPNGEVTY----VLQDDY 2127
Query: 99 HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
F I+P SG + E ++ +Y +T+ A D G S T VE+ + N PVF
Sbjct: 2128 GHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPSLSTSVELPITI-VNKAMPVF 2186
Query: 156 QQNTYDVNVSEGASINSTVATI 177
+ Y +V+E +N+ + +I
Sbjct: 2187 DKPFYTASVNEDIRMNTPILSI 2208
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
LT+N+ D NDN+P IQ +++ +I+++EA D DLG N E+TYS+
Sbjct: 817 LTINVEDANDNSPVF-----IQDSYSVNILESSGIGTEIIQVEARDKDLGSNGEVTYSVL 871
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
T +F I+ +G++ +L + YS+ ++A D Q V++ +
Sbjct: 872 ----TDTQQFAINSSTGIVYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLD 927
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N SP F ++Y V V E + + +A +
Sbjct: 928 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 958
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
+ + V + D NDN P+ P QI+ E R+ I + A D D G NAEI+YSI
Sbjct: 1238 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1296
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
++ G KF IDP++G++ + + AG +T++A D G +++ +E P
Sbjct: 1297 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1354
Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
P+ F + Y+ V E + V ++V
Sbjct: 1355 PSPIPLTFDEPFYNFTVMESDRVTEIVGVVSV 1386
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 30 GTAASVPVSLTVNLNDINDNAP------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVN 83
G + S ++T+ + DINDN P L +P + Q++ + AT D+G N
Sbjct: 3213 GQSLSSLTTVTITVLDINDNPPVFERRDYLVTVP----EDTSPGTQVLAVFATSKDIGTN 3268
Query: 84 AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVE 141
AEITY I + G KF+I+P++G I + L +++ + V+A D G + +
Sbjct: 3269 AEITYLIRSGNEQG--KFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVAT 3326
Query: 142 VSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
V++ + N P F Q+ Y +SE A + +V
Sbjct: 3327 VNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 8 NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
NLD + F F V R+ Q TA S PV + + + D+NDN P + I +
Sbjct: 1838 NLDHE--TIAHFHFHVHVRDSGSPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETILLL 1894
Query: 63 AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
+++K+ ATD D V E+TYS+ S L F ID SGV+ ++ + Y
Sbjct: 1895 PTYVGVEVLKVSATDPDSEVPPELTYSLMEGS---LDHFLIDSNSGVLTIKNNNLSKDHY 1951
Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ V+ +D GK T + +V F Q+ Y ++SE + + VA +
Sbjct: 1952 MLIVKVSD--GKFYSTSMVTIMVKEAMDSGLHFTQSFYSTSISENNTNITKVAIV 2004
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
++ + + LDR+ G + V A ++ + + + + D+NDNAP P+ P+
Sbjct: 1099 VITAADILDRE--TMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPV 1156
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
++ +++I+A D D N ++TY I S + F I+ ++G+I TT + +
Sbjct: 1157 VMENSPKDVSVIQIQAEDPDSSSNEKLTYRI--TSGNPQNFFAINIKTGLITTTSRKLDR 1214
Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
EQ + + V TD G Q+ + V V V N P F + Y + + E
Sbjct: 1215 EQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPE 1265
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 45 DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
D NDN P P + E +I++IEATD D +++Y+++ + + + K
Sbjct: 1452 DNNDNGPEFSQ-PNYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTVHSSIDSISMRK 1508
Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
FRIDP +GV+ T +L A +++ + + D + + V V V N SP F
Sbjct: 1509 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1568
Query: 158 NTYDVNVSEGASINSTVATIT 178
Y+ +V E A++ S V +T
Sbjct: 1569 PLYEASVFESAALGSAVLQVT 1589
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 27/178 (15%)
Query: 19 FRFQVIAREKQGTAASVPVS-----LTVNLN----DINDNAPRLPM--IPPIQIQAGEAR 67
F F+V AA++P+ TV+++ D+NDN P I ++
Sbjct: 2779 FHFKV--------AATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIMEGMPVG 2830
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTG--LHKFRIDPRSGVIETTGKLI--AGEQYS 123
++ ++ A D D G N ++TYS++ S + F ID +G I T L ++
Sbjct: 2831 TKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPTFT 2890
Query: 124 ITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+V A+D G SS +V V V N +PVF Q Y NV E VA ++
Sbjct: 2891 FSVVASDLGEAFSLSSTALVSVRVT-DINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
+V + LDR+ + + ++ AR+K G V+L V L+D+ND +P +P
Sbjct: 885 IVYVADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYS 942
Query: 59 IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
+++ + I +E D DLG+ ++ YS+ + N +F ID SG I + +L
Sbjct: 943 VKVLEDLPVGTVIAWLETHDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 999
Query: 118 AGEQ--YSITVQATDTG 132
+Q Y++TV+A D G
Sbjct: 1000 YEKQQFYNLTVRAKDKG 1016
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 90 IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
IY V + ++ F I+P SGVI TT K + E+ Y + +QAT+ G +S V + +V
Sbjct: 1702 IYEVKDGDINGIFTINPYSGVI-TTQKALDYERTSSYQLIIQATNMAGMASNATVNIQIV 1760
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
N +PVF + Y ++SE A INS V ++ S L
Sbjct: 1761 -DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1796
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 22 QVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDND 79
+V E + +T+++ D ND+ P P+ ++ ++ + A+D D
Sbjct: 441 EVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500
Query: 80 LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-KS 135
G N ITYSI ++ L F I+ +GVI TT +L + E Y V+A+D G
Sbjct: 501 KGENGYITYSI---ASLNLLPFVINQFTGVISTTEELDFESSPEIYRFIVRASDWGSPYR 557
Query: 136 SQTIVEVSVVPGP-NTRSPVFQQ 157
++ V V++ G N SP+F++
Sbjct: 558 HESEVNVTIRIGNVNDNSPLFEK 580
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 31 TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
T A V++ + +ND+NDN P P +A ++++ + D D N + Y
Sbjct: 2265 TGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHY 2324
Query: 89 SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
I + F ID SG+I T +++ E ++ V++ D+G SS+ +V +
Sbjct: 2325 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHI- 2382
Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
+ N PVF Q Y+ VSE A V + S
Sbjct: 2383 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2419
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
++++ A D D G + EI YSI +GL +F ID SGVI T ++ E Y +TV
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIR--DGSGLGRFSIDDESGVI-TAADILDRETMGSYWLTV 1118
Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
ATD G + +EV + V N +P+ + Y
Sbjct: 1119 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 45 DINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
D+ND P P + I ++ R + ++ ATD D+G N E Y+ + F
Sbjct: 150 DMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADIGSNGE----FYYYFKNKVDLFS 205
Query: 103 IDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
+ P SGVI +G+L E+ Y + + A D G K
Sbjct: 206 VHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 239
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
F+I+PRSG+I T L + E Y + V + K+ TI + N +P FQQ
Sbjct: 420 FKINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTIS----IEDANDHTPEFQQP 475
Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
YD V+E + ++V T++ S G
Sbjct: 476 LYDAYVNESVPVGTSVLTVSASDKDKG 502
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
+ ++A+ G ++ + L D+NDN P + + + +++A D
Sbjct: 3099 YSLMAKATDGGGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDP 3158
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG-GKSSQ 137
D+G+N ++ YS+ S G+ ++E Y+I+V+ATD G+S
Sbjct: 3159 DIGINRKVVYSLAD-SAGGVFSIDSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLS 3217
Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++ V++ V N PVF++ Y V V E S + V +
Sbjct: 3218 SLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAV 3258
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
I+KI+A D D G N ++ ++I NT F ID +G ++ + + Y + +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYLLNIT 802
Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
D G KSS ++ ++V N SPVF Q++Y VN+ E + I + + +
Sbjct: 803 IYDLGNPQKSSWRLLTINV-EDANDNSPVFIQDSYSVNILESSGIGTEIIQV 853
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 32 AASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYS 89
+ S V + + ++D+NDN P +I + R V ++A+D D + YS
Sbjct: 2373 SLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSSDFDRLEYS 2432
Query: 90 IYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSSQTIVEVSVVPG 147
I +S F +D +SGVI + K YS+ V +D G +S V + V+ G
Sbjct: 2433 I--LSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVSD-GLFTSTAQVHIRVL-G 2488
Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTV 174
N SP F Q+TY V E + + V
Sbjct: 2489 ANLYSPAFSQSTYVAEVRENVAAGTKV 2515
Score = 38.5 bits (88), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGE 120
A +++ + ATD D G +I+Y+I +++ +F ID VI TT +L + G+
Sbjct: 2511 AGTKVIHVRATDGDPGTYGQISYAI--INDFAKDRFLIDSNGQVI-TTERLDRENPLEGD 2567
Query: 121 QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
SI V+A D GG+++ V V VV N +P F Y +V
Sbjct: 2568 -VSIFVRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2609
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 39 LTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
L V++ IN++AP + ++ P ++ E +V ++ D D G N EI S+ V+
Sbjct: 252 LYVHIERINEHAPTIHVVTHVPFSLEK-EPTYAVVTVD--DLDDGANGEIE-SVSIVAGD 307
Query: 97 GLHKFRIDPRSGVIETTGKLIAGEQ---------YSITVQATDTGGKSSQTIVEVSVVPG 147
L +F + + G K+ +Q Y++T+QA D G + ++ +
Sbjct: 308 PLDQFFL-AKEGKWLNEYKIKERKQIDWESFPYGYNLTLQAKDKGSPQKCSALKAVYIGN 366
Query: 148 PNTRSPV---FQQNTYDVNVSEGASINSTVATITVS 180
P TR V F++ YDV++SE + VA + +S
Sbjct: 367 P-TRDTVPIRFEKEVYDVSISEFSPPGVVVAIVKLS 401
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGKSSQTIVEVSVVPGPNTRSP 153
+F ID +GV++ L Y +T++A+D TG ++ T+ +V N P
Sbjct: 2228 FKQFNIDFDTGVLKVVSPLDYEVTSAYKLTIRASDALTGARAEVTVD--LLVNDVNDNPP 2285
Query: 154 VFQQNTYDVNVSEGASINSTVATI 177
+F Q TY+ +SE + I + V +
Sbjct: 2286 IFDQPTYNTTLSEASLIGTPVLQV 2309
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
LV K+ LDR+ + V A + A S ++ ++++D+NDN+P P
Sbjct: 3397 LVKVKKKLDRE--RVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAV 3454
Query: 61 IQAGE-ARRQIVKIEATDNDLGVNA-EITYSIYHVSNTGLHKFRIDP----RSGVI-ETT 113
IQ + I+++ TD D N ++SI +S +F +DP RS V+ + T
Sbjct: 3455 IQENKPVGTSILQLVVTDRDSFHNGPPFSFSI--LSGNEEEEFVLDPHGILRSAVVFQHT 3512
Query: 114 GKLIAGEQYSITVQATDTGG--KSSQTIVEVSVV 145
L +Y + VQA D+G + S T + V V+
Sbjct: 3513 ESL----EYVLCVQAKDSGKPQQVSHTYIRVRVI 3542
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 22/179 (12%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAP---RLPM 55
L+ + LDR+ + F V+A + + +A+VPV +N+ DINDN P R P
Sbjct: 1954 LITTVGKLDRELQ--ASYNFMVLATDGGRYEVRSATVPVQ--INVLDINDNRPIFERYPY 2009
Query: 56 IP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
I P IQ G+ ++K++A D DLG NAEI YS+ ++ KFRI+P +G + +
Sbjct: 2010 IGQVPALIQPGQT---LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSAS 2066
Query: 114 GKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPV--FQQNTYDVNVSE 166
L +G+ + V A D G +SS ++E+ + P +PV FQ TY V + E
Sbjct: 2067 QSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQG-TPVLRFQNETYRVMLKE 2124
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 29 QGTAASVPV----SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGV 82
Q T PV + + + D+NDNAP M+ ++ E + A D D G
Sbjct: 850 QATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGS 909
Query: 83 NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIV 140
+ ++TYS+ S GL F ID RSG + + L + +++++ V ATD G S T +
Sbjct: 910 SGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNL 967
Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
+ V V N PVF+++ Y VNVSE SIN+ + + S L +G
Sbjct: 968 TILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTG 1013
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
+ ++E LDR+ + V AR++ S V + ++++D+NDNAP + P +
Sbjct: 1155 ISTREPLDRELRE--LYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1212
Query: 61 IQAGEA-RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA 118
++ + ++V++ A D D G NA ITYSI ++ H F IDP SGVI T L
Sbjct: 1213 VREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDH 1272
Query: 119 GEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
E+ Y + V A+D G +T+ + V V N P F ++ V E A++ V
Sbjct: 1273 EERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVG 1332
Query: 176 TIT 178
+I+
Sbjct: 1333 SIS 1335
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPP 58
YLV+ LDR+ + + V+A +K S+ + + D+NDN P +
Sbjct: 401 YLVIVHLPLDREIVS--NYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHA 458
Query: 59 IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA 118
++ + ++++ A D D G+N+ +TYS+ T F+IDP++G+I T +
Sbjct: 459 NVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDC 518
Query: 119 GEQ--YSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
+ +TV A D G S T + + N P+F Q+ Y+V+V+E + +
Sbjct: 519 ETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 578
Query: 176 TITVSRLASGCAIM 189
++ S G M
Sbjct: 579 KVSASDPDCGVNAM 592
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 4 VSKENLDRDPPNPGKFRFQVIAREK-QGTAASVPVSLTVNLNDINDNAPRLPM---IPPI 59
+S LDR+ ++ Q+ A ++ Q + ++T+ + D NDNAPR + +
Sbjct: 1851 LSARPLDRE--QHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSV 1908
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
Q A +V+I A D DLGVNA + YS+ +N +F ID +SG+I T GKL
Sbjct: 1909 QEDAPLGT-SVVQISAVDADLGVNARLVYSL---ANETQWQFAIDGQSGLITTVGKLDRE 1964
Query: 120 EQ--YSITVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTY 160
Q Y+ V ATD G +S+ V+++V+ N P+F++ Y
Sbjct: 1965 LQASYNFMVLATDGGRYEVRSATVPVQINVL-DINDNRPIFERYPY 2009
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 20 RFQVIAREKQGTAASVPVSLT--VNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIE 74
R +I G S+ +LT V++ D+NDN P + E+R QI+++
Sbjct: 948 RHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK-DEYSVNVSESRSINAQIIQVN 1006
Query: 75 ATDNDLGVNAEITYSIYHV-----------SNTGLHKFRIDPRSGVIETTGKLI--AGEQ 121
A+D D G NA ITY I S+ H F I P SG I L ++
Sbjct: 1007 ASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH-FGIFPNSGWIYLRAPLDRETRDR 1065
Query: 122 YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
Y +TV ATD G ++ V V V N P FQ++ Y+ + E S V +T S
Sbjct: 1066 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTAS 1125
Query: 181 RLASG 185
L G
Sbjct: 1126 DLDLG 1130
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 20 RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGE-ARRQIVKIEATD 77
+ V+AR+ S ++ V ++D+NDN P + + E R I+K+ A+D
Sbjct: 525 QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASD 584
Query: 78 NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS 135
D GVNA + Y+I L +F + SG I G+L + Y V ATD GG S
Sbjct: 585 PDCGVNAMVNYTIGE-GFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLS 643
Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
+ ++++ + + R PVF Y V++ E +S ++
Sbjct: 644 TTAMIKMQLTDVNDNR-PVFYPREYKVSLRESPKASSQASS 683
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGE--ARRQIVKIEATDNDLGVNAEITYSIYHV--S 94
+ L+D NDN P+ P+ + A + + A+D D G ++ YSI
Sbjct: 2795 FRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSD 2854
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTR 151
+ FR+D SG++ T+ + EQ Y + + A+D GGK + V V + +
Sbjct: 2855 ESSWKMFRVDSESGLV-TSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVE-IESRDEF 2912
Query: 152 SPVFQQNTY 160
+P F + TY
Sbjct: 2913 TPQFTERTY 2921
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 38 SLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYSIYHVSN 95
++ + + D+NDN+P + E I + A+D D G NA++ YSI N
Sbjct: 1779 TIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITG-GN 1837
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-KSSQTIVEVSV-VPGPNT 150
G +KF ID SG E + + + EQ Y++ +QA+D G KS Q +++ V N
Sbjct: 1838 LG-NKFSIDSSSG--ELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQND 1894
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATIT 178
+P F+ + Y +V E A + ++V I+
Sbjct: 1895 NAPRFKLSKYTGSVQEDAPLGTSVVQIS 1922
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVP----VSLTVNLNDINDNAPRLPMIP 57
LVV++ LDR+ + +FR ++ R TA++ P +++ + + D+NDNAP P
Sbjct: 1382 LVVARL-LDREVQS--EFRLEI--RALDTTASNNPQSSAITVKIEVADVNDNAPEWPQ-D 1435
Query: 58 PIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHV-------SNTGLHKFRIDPRS 107
PI +Q EA I ATD D G N ++ Y + + FR+D +
Sbjct: 1436 PIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLT 1495
Query: 108 GVIETTGKLI--AGEQYSITVQATD 130
G + L A ++Y + VQA D
Sbjct: 1496 GALSLQAPLDFEAVQEYLLIVQALD 1520
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 27/197 (13%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-RLPMIPPIQIQAGEARRQIVKIEAT 76
++ VIA + A +V LTV +ND NDNAP L PP A +I + +
Sbjct: 2447 EYELDVIASDAAHEARTV---LTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSV 2503
Query: 77 DNDL-----------GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-----AGE 120
D DL G N+++ Y I F + P +GV+ + +
Sbjct: 2504 DFDLLTVNATDADSEGNNSKVIYII----EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSG 2559
Query: 121 QYSITVQATDTGGKS--SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
Y + + A D G + S T++ V + RS F QN Y +SE A + S V +
Sbjct: 2560 DYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQ-FLQNQYRAQISEAAPLGSVVLQLG 2618
Query: 179 VSRLASGCAIMNKEENS 195
L AI+ E S
Sbjct: 2619 QDALDQSLAIIAGNEES 2635
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQIQAGEAR 67
LDR+ + +++ V+A + AA + V + D NDN P+ +I+ R
Sbjct: 1058 LDRETRD--RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1115
Query: 68 RQIVKI-EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
+V + A+D DLG NA I YS+ ++++ F++ P +G I T L E Y +
Sbjct: 1116 GSVVGVVTASDLDLGENAAIRYSLLPINSS----FQVHPVTGEISTREPLDRELRELYDL 1171
Query: 125 TVQATDTG 132
V+A D G
Sbjct: 1172 VVEARDQG 1179
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 37 VSLTVNLNDINDNAP-----RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
+++ + + D+NDN P R P G + ++++ A+D D N + Y+I
Sbjct: 217 MTVNITIQDVNDNQPIFNQSRYFATVPENATVGTS---VLQVYASDTDADENGLVEYAIN 273
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
+ FRIDPR+G I L E + + V A D G + +T VS+ V
Sbjct: 274 RRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 333
Query: 149 NTRSP----VFQQNTYDVNVSEGASINSTVATITV 179
N P +F + +SE A VA I+V
Sbjct: 334 NDNQPTINVIFLSDDASPKISESAQPGEFVARISV 368
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQ 69
+ F V+A ++ G + + + + L D+NDN P L P QA
Sbjct: 630 YEFPVLATDRGGLSTTAMIKM--QLTDVNDNRPVFYPREYKVSLRESPKASSQASST--P 685
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSIT 125
IV + ATD D G +++Y I + G+ FRID +G I + + + +
Sbjct: 686 IVAVVATDPDYGNFGQVSYRIVAGNEAGI--FRIDRSTGEIFVVRPDMLSVRTQPMHMLN 743
Query: 126 VQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
+ ATD G S +V +S++ R P+F++ Y+ V E G + S +A
Sbjct: 744 ISATDGGNLRSNADAVVFLSIIDAMQ-RPPIFEKARYNYYVKEDIPRGTVVGSVIA 798
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 16 PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ-IQAGEARRQIV-KI 73
P + R ++AR + L + L D NDN+P+ + + G + V ++
Sbjct: 2232 PNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQV 2291
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPR-SGVIETTGKLIAG--EQYSITVQATD 130
A D+D G NA + Y I V + F I+P SG++ T L + Y + + ATD
Sbjct: 2292 HAFDSDAGSNARLRYHI--VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATD 2349
Query: 131 TG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
G + + V +V N P F N V VSE + + + +I+
Sbjct: 2350 EGVPQMTGTATIRVQIV-DVNDNQPTFPPNNL-VTVSEATELGAVITSIS 2397
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 29/168 (17%)
Query: 38 SLTVNLN--DINDNAPRL-----------PMIPPIQIQAGEARRQIVKIEATDNDLGVNA 84
S+TV L D ND+AP + + GE IV A D D G N
Sbjct: 1532 SVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIV---AVDEDSGDNG 1588
Query: 85 EITYSIYHVSNTGLHKFRIDPRSGVIE-------TTGKLIAGEQYSITVQATDTGG---K 134
++TY I G +FRI+ ++G+IE T + G ++++ + A D G K
Sbjct: 1589 QLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPK 1646
Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
S + + +V G + P F Q Y + E S V +T L
Sbjct: 1647 KSSLNLHL-IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1693
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
+ + S++ LDR+ + K+ ++ A + + ASVPV + V DINDN+P+ +
Sbjct: 2966 WRITSRKTLDRE--HIAKYLLRITASDGK-FQASVPVEVFVL--DINDNSPQCSQL---- 3016
Query: 61 IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
+ G+ R I+K+ A D D+ NA+ITYS++ G +F++DP +G + T
Sbjct: 3017 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLH---GPGAQEFKLDPHTGELTTLS 3073
Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
L + Y++ +ATD GG+S Q V + + N +P F + V V + ++ +
Sbjct: 3074 VLDRERKDVYNLVAKATDGGGQSCQAEVTLH-IEDVNDNAPRFFPSHCAVAVFDNTTVKT 3132
Query: 173 TVATI 177
VA +
Sbjct: 3133 PVAVV 3137
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+ + + LDR+ N ++ +V ++ + V + D+NDN+P +
Sbjct: 1193 LLSTAKQLDRE--NKDEYVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSH-KLFNV 1249
Query: 62 QAGE-----ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ E + + ++ A+D D G+N ITYSI + FRIDP +GV+ ++
Sbjct: 1250 RLSERLSPLSPEPVYRLVASDPDEGLNGSITYSI---EESDEESFRIDPVTGVVSSSSTF 1306
Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSV--VPGPNTRS-PV-FQQNTYDVNVSEGASINS 172
AGE +T++ATD+G + T V + + +P P S P+ F ++ Y V E +N
Sbjct: 1307 AAGEYNILTIKATDSGQPALSTSVRLHIEWIPQPRPSSIPLSFDESHYSFAVMETDPVNH 1366
Query: 173 TVATITV 179
+ I+V
Sbjct: 1367 MLGVISV 1373
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 41 VNLNDINDNAPRLPMIPPIQ-IQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
V++ D+NDN P +P IQ G E + ++ ATD DLG N +TY
Sbjct: 2058 VSVEDVNDNIPEFQHLPYYTVIQDGTEPGDVLFQVSATDKDLGANGTVTYGF----AEDY 2113
Query: 99 HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
FRIDP G I A +Y + V A D G QT VEV V N +P+FQ
Sbjct: 2114 AYFRIDPYVGDISLKKPFDYQALNKYHLRVTARDAGTPPLQTEVEVHVTVR-NKSNPLFQ 2172
Query: 157 QNTYDVNVSEGASINSTV 174
Y V V E ++ + +
Sbjct: 2173 SPYYKVKVPENITLYTPI 2190
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
+ ++A+ G S +T+++ D+NDNAPR P + + + + + A D
Sbjct: 3083 YNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3142
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSITVQATDTGGK-- 134
D GVNA++ YS+ +++ +F ID SGVI E ++ + +TV+A+D G
Sbjct: 3143 DQGVNAQVVYSL---TDSADGQFSIDATSGVIRLEKPLQVRSSSAVELTVRASDLGTPIP 3199
Query: 135 -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV---ATIT 178
S+ V VS+V G P+F + + V E A I+ V AT+T
Sbjct: 3200 LSTLGTVTVSIV-GLEDYLPIFLNSEHSTQVPEDALIDMEVLYLATLT 3246
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 16 PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVK 72
P + V+ R+++ V +T+++ D N ++P P + + ++++
Sbjct: 1518 PSQHILTVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQ-PRYEANVPDTTTPGTELLQ 1576
Query: 73 IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATD 130
+ A D D G NAE+ YS ++ G F ID G+I +L + ++++TV+A D
Sbjct: 1577 VRAVDADRGANAEVHYSFLKGNSEGF--FNIDSLLGIITVAQRLDHVHLNRHALTVKAED 1634
Query: 131 TGGKSSQTIVEVSVVPGP-NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
G + V V P ++ +P+F ++ Y + + E I S + I+ +
Sbjct: 1635 QGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPESVPIGSPILLISAA 1685
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 38 SLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ +N+ D+N++ PR + ++ I+ + A+D+D VN+ ITYS+ V
Sbjct: 3308 TIVINVTDVNEHHPRFTHDLYTVRVLENAIVGDVILTVSASDDDGPVNSVITYSL--VGG 3365
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
L F IDP+ G ++ K + EQ YS+ ++ATD+G EV+V V N
Sbjct: 3366 NQLGHFTIDPKKGKLQ-VAKALDWEQTPSYSLRIRATDSGQPPLHEDTEVAVEVVDVNDN 3424
Query: 152 SPVFQQNTYDVNVSEGASINSTVATITV 179
P F Q Y V E + I V + +
Sbjct: 3425 PPRFFQLNYSTAVQENSPIGIKVLQLIL 3452
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
FR +V A ++ + + VN++DINDN P R P + ++K++A
Sbjct: 2344 HFRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCGHLVLKVQA 2403
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
D D+G + + Y I +S F I+ SG+I K Y++ V A+D G
Sbjct: 2404 LDPDIGDTSRLEYLI--LSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGASD--G 2459
Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
T+ N SP FQQN Y+ ++E A + + V
Sbjct: 2460 VFQATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
+ + + LDR+ +++AR+ G A V + L D NDNAP+ + I
Sbjct: 2537 ITTLQKLDRENSTERVIAIKIMARDGGGKVAFCTVKII--LTDENDNAPQFKASGYTVSI 2594
Query: 62 QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
+ +R I+++ A D D G NA++TYS+ + ++P +GV++ L+ E
Sbjct: 2595 PSNVSRDSPIIQVLAYDADEGRNADVTYSVDSTEDLAEEIIEVNPTTGVVKVKESLVGLE 2654
Query: 121 QYSI--TVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATI 177
++ ++A D G ++V V + PN P F + Y + SE S + ++
Sbjct: 2655 NKAVDFNIKAQDGGPPHWDSLVPVRLQVVPNEIPLPKFSEPLYTFSASEDLPEGSEIGSV 2714
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 38 SLTVNLNDINDNAPRLP-MIPPIQIQAGE-ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ V + DINDN P ++ + G A+ ++++ A+D D G N +++Y I +
Sbjct: 2257 TVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGS 2316
Query: 96 TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
FRI+ +G + T +L A + + + V+ATD G + +T+V V+ V N
Sbjct: 2317 DVSKFFRINGSTGEMFTIQELDYEAHQHFRVKVRATDRGDPPLTGETLVVVN-VSDINDN 2375
Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
P F++ Y+ NVSE A+ V +
Sbjct: 2376 PPEFREPQYEANVSELATCGHLVLKV 2401
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 37 VSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
VS+ + + D+NDN P P + ++++ A D D G + +++Y +
Sbjct: 2783 VSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEP 2842
Query: 95 NTGLHK-FRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK---SSQTIVEVSVVPGP 148
+ +H+ F +D SG I T +L Q Y V A D G SSQ +VEVS+
Sbjct: 2843 GSNIHQLFAVDSESGWITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSIT-DE 2901
Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATI 177
N P F Y +V E VAT+
Sbjct: 2902 NDNPPRFASEDYRGSVVENNEPGELVATL 2930
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
+ V+A ++ S + + + DINDN P + P+ P + ++++EA
Sbjct: 1103 YWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTSVLQLEAW 1162
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGK 134
D D ++T+++ S + F + P +G++ T +L ++Y + V D G
Sbjct: 1163 DPDFSSQGKLTFNL--TSGNHMGHFIVHPFTGLLSTAKQLDRENKDEYVLEVTVQDNGDP 1220
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
++ V V V N SP+F ++V +SE S
Sbjct: 1221 PLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLS 1256
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
++ + ATD D G N ITYSI + F IDP GVI TT + + Y+ V
Sbjct: 477 VLTVTATDQDHGDNGHITYSI---AGPKAVPFSIDPYLGVISTTKSMDYELMKRIYTFRV 533
Query: 127 QATDTGGKSSQTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+A+D G Q EVSV + N P+F++ V++ + A + ++ ++
Sbjct: 534 RASDWGSPFRQE-KEVSVSLRLKNLNDNQPMFEEVNCTVSLRQDAPVGKSIMAVS 587
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 32/187 (17%)
Query: 11 RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGE 65
RD P G F V + V L DINDN P+ + P + G
Sbjct: 896 RDQPTKGHQLFSV-------------TDVIVTLEDINDNPPQCITEHSSLKVPEDMPLGT 942
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
+ ++A+D DLG E+ Y + V T FR+DP +G + +L + Y
Sbjct: 943 V---LTFLDASDPDLGPAGEVKYILVDDVHGT----FRVDPMTGALSLEKELDFERRAGY 995
Query: 123 SITVQATDTG---GKSSQTIVEVSVVP-GPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+++ A+D+G + + VEV V+ N SP F Y V E + + V +T
Sbjct: 996 NLSFWASDSGRPLARRTLCHVEVLVMDVNENLHSPHFSSFVYQGQVQENSPAGTQVMVVT 1055
Query: 179 VSRLASG 185
SG
Sbjct: 1056 AQDDDSG 1062
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKL---IAGEQYSI 124
++++++ATD D G + Y+I+ + G + F++DP SGV+ T G L Q+ +
Sbjct: 1466 ELLRVQATDQDHGKG--LIYTIHSSRDPGSANLFQLDPSSGVLVTVGTLDLHSGPSQHIL 1523
Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
TV D + V V++ V N SP F Q Y+ NV +
Sbjct: 1524 TVMVRDQEMPIKRNFVWVTIHVEDGNLHSPHFTQPRYEANVPD 1566
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
L F D ++GV+ TG L + ++ TV+ATDT G S+ VEV +V N P
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKNKHVFTVRATDTALGSFSEATVEV-LVEDINDNPPT 2271
Query: 155 FQQNTYDVNVSEGASINSTVATITVSRLASG 185
F Q Y +VSEG+ + V + S SG
Sbjct: 2272 FSQLVYSTSVSEGSPAQTPVIQLLASDQDSG 2302
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
+ V++ D ND P L P + E R I K+ ATD DLG NAE Y+ N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRFTISEDRPLKSPICKVTATDADLGQNAEFYYAF----N 188
Query: 96 TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQ 137
F I P SGV+ GKL +Y + V A D K S+
Sbjct: 189 ARSEVFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVDRMRKISE 232
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
A Q++ + A D+D G++ E+ Y + + TGL F I+ +G++ET L Y
Sbjct: 1047 AGTQVMVVTAQDDDSGLDGELQYFLR--AGTGLEAFSINQDTGMLETLAPLDREFTPYYW 1104
Query: 124 ITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+TV A D G + EV + V N P + + +V E A + ++V +
Sbjct: 1105 LTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTSVLQL 1159
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
LTV + D ND PR PP Q E + +++ D D N + Y++
Sbjct: 806 LTVTVKDWNDKPPRF---PPGGYQLTISEDTEVGTTVAELKTRDTDSEDNGRVRYTLL-- 860
Query: 94 SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVV 145
T KF + P +G + TG+L + QY + +A D K Q V+
Sbjct: 861 --TPTEKFSLHPLTGELVVTGQLDRESEPQYILKAEARDQPTKGHQLFSVTDVI 912
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 101 FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
F+++ R+G+I TT + EQ + + G+++ T++ + +V N +PVF +++Y
Sbjct: 406 FKLNARTGLITTTKPVDFHEQNQYQLHVKTSLGQATTTVI-IDIVDC-NNHAPVFNRSSY 463
Query: 161 DVNVSEGASINSTVATITVS 180
+ + E ++V T+T +
Sbjct: 464 EGTLDENIPPGTSVLTVTAT 483
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 10/139 (7%)
Query: 46 INDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFR 102
IN +AP+ P I E + + ATD D G + + Y I + G F
Sbjct: 707 INHHAPQFEDHFPQSIDILEQVPVNTPLAHLAATDPDPGFHGRLVYVIADGNEEGC--FD 764
Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQN 158
I+ +G++ L Y + V D G KSS ++ V+V N + P F
Sbjct: 765 IELETGLLTVAAALDYETTSFYVLNVTVYDLGTPPKSSWKLLTVTVKDW-NDKPPRFPPG 823
Query: 159 TYDVNVSEGASINSTVATI 177
Y + +SE + +TVA +
Sbjct: 824 GYQLTISEDTEVGTTVAEL 842
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDLGVNAEITYSIY 91
VS+++ L ++NDN P M + Q + I+ + A D D N + Y I
Sbjct: 548 VSVSLRLKNLNDNQP---MFEEVNCTVSLRQDAPVGKSIMAVSAIDMDELQN--LKYEI- 601
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYSITVQATDTGGKSSQTIVEVSVVP 146
VS F ++ SGVI + YS+ + A+D +S T ++V+VV
Sbjct: 602 -VSGNEQDYFHLNHFSGVISLKRSFMNLTAVRPTVYSLKITASDGKNYASPTTLKVTVVK 660
Query: 147 GPNTRSPV 154
P + PV
Sbjct: 661 DPRSEVPV 668
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 91 YHVSNTGLH-KFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VP 146
YH++ KFR+D +G++ G L +Y ++++ + S + + + V
Sbjct: 3255 YHITGGNEQGKFRLDAHTGILYVNGSLDFETNPKYFLSIECSRKSSSSLSDVTTIVINVT 3314
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
N P F + Y V V E A + + T++ S
Sbjct: 3315 DVNEHHPRFTHDLYTVRVLENAIVGDVILTVSAS 3348
Score = 30.0 bits (66), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 101 FRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
F ++ SG+I T +L + Y + ++ ++ G ++ + V ++ N +P F ++
Sbjct: 1703 FSMNSYSGLISTQKRLDHEKVSSYQLKIRGSNMAGVFTEVVALVYII-DENDNAPAFLKS 1761
Query: 159 TYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
T+ ++SE A ++S + S L + ++E NS
Sbjct: 1762 TFVGHISEAAPLHSLILGEDNSPLVIRASDSDQEANS 1798
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 67.8 bits (164), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
+V + E LDR+ + FR V A++ S +LT+ + D ND+ P Q
Sbjct: 240 VVTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQ 292
Query: 62 QAGEARRQ-------IVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETT 113
+ E+ R+ ++ + ATD D NA I Y + ++ F IDPRSGVI T
Sbjct: 293 EYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTR 352
Query: 114 GKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
G + E Y +TV+A+D G G S T + V N +P F + Y V V E
Sbjct: 353 GPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDV 412
Query: 169 SINSTVATITVS 180
+ + V +T S
Sbjct: 413 TPGAPVLRVTAS 424
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
+ + AR+ S L + +ND+NDNAP+ +PP
Sbjct: 782 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFT-------- 833
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
+++I ATD D G+N + Y+ + + G F ++ SG++ T +L QY +
Sbjct: 834 SVLQILATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRA 892
Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
A D G ++T +EV+V V N PVF+Q+ +DV V E + I VA +T +
Sbjct: 893 YAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 947
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNAEITYSIYHVSN 95
+TV + DIND P + + P Q E+ ++ ++A D D G NA + YS+ V +
Sbjct: 491 VTVQVLDINDIRPPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAGVGH 550
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
F I+ +G I +L E YS V+A D G + VSV + N +
Sbjct: 551 D--FPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNN 608
Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
P F Q Y V ++E A++ ++V T++
Sbjct: 609 PTFTQPEYTVRLNEDAAVGTSVVTVS 634
Score = 50.4 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
+ F V AR+ A + S++V + D+NDN P P ++ E +V + A
Sbjct: 577 YSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQ-PEYTVRLNEDAAVGTSVVTVSA 635
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA---------GEQYSITV 126
D ++ ITY I S ++F I +SG G L++ QY + V
Sbjct: 636 VDRH--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLVSLALPLDYKLERQYVLAV 686
Query: 127 QATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
A+D T ++Q +V V+ NT PVFQ + Y VN +E +TV I+ + +G
Sbjct: 687 TASDGTRQDTAQIVVNVT---DANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDEDTG 743
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSN 95
+ VN+ D N + P + E R +V I ATD D G NA ITY +
Sbjct: 699 IVVNVTDANTHRPVFQS-SHYTVNGNEDRPAGTTVVLISATDEDTGENARITYFM----E 753
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTR 151
+ +FRID +G + T +L +Q Y++ + A D G KS T +E+ +V N
Sbjct: 754 DSIPQFRIDGDTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEI-LVNDVNDN 812
Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
+P F +++Y V E ++V I + SG
Sbjct: 813 APQFLRDSYQGTVYEDVPPFTSVLQILATDRDSG 846
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 41 VNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
+++ D NDNAP+ + +Q E ++++ A+D D G NA + YSI +S
Sbjct: 387 LSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNALVHYSI--MSGNA 443
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGG---KSSQTIVEVSVVPGPNTRS 152
+F +D ++G ++ L ++Y++ ++A D G + +V V V+ + R
Sbjct: 444 RGQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRP 503
Query: 153 PVFQQNTYDVNVSEGASINSTV 174
P+F + V E + V
Sbjct: 504 PIFVSTPFQATVLESVPLGYLV 525
Score = 36.6 bits (83), Expect = 0.12, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 9/141 (6%)
Query: 49 NAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFR 102
N P P QA Q + + A D D G + Y++ + ++ H F
Sbjct: 174 NVNTAPQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFS 233
Query: 103 IDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNT 159
+DP +GV+ T +L + V A D G + +++ V N PVF+Q
Sbjct: 234 LDPITGVVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQE 293
Query: 160 YDVNVSEGASINSTVATITVS 180
Y ++ E + V T+ +
Sbjct: 294 YKESLRENLEVGYEVLTVRAT 314
Score = 35.8 bits (81), Expect = 0.17, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
+V + LDR+ N ++ + A +K A P+ +TV + D NDN P
Sbjct: 873 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVF 930
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
+ + ++ ATD D G NA+I Y I V F++D SG + L
Sbjct: 931 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 988
Query: 120 E--QYSITVQATDTGGKSSQTI 139
+ +Y + +QAT S T+
Sbjct: 989 DRPEYVLVIQATSAPLVSRATV 1010
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
+++ E LDR+ P G + R G + ++ V + D NDNAP+ + +
Sbjct: 2551 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASV 2608
Query: 62 QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
+A R +V +++A D D G N+ ITYS+Y ++ + IDP +G + T G +
Sbjct: 2609 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2668
Query: 118 AGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
S V+A D G + S V + V+P P T P F Q+ Y ++E SI STV
Sbjct: 2669 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLP-PETFLPSFTQSQYSFTITEDTSIGSTVD 2727
Query: 176 TITV 179
T+ +
Sbjct: 2728 TLRI 2731
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
++ + E LD + + K ++ R+++ + VN+ D ND++P P+
Sbjct: 1516 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
++ ++++ A D D G NAE+ YSI NTG + F+I+P G+I + + +
Sbjct: 1574 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMA 1631
Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
A Q+ ++V+ TD G S+ IV +S+ N+ P F Y V+E I ++V
Sbjct: 1632 AMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690
Query: 176 TIT 178
I+
Sbjct: 1691 LIS 1693
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 42 NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
N+ D+NDN+P LP +Q+ A E I ++ A D D G N E+TY V
Sbjct: 2072 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2126
Query: 99 HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
F I+P SG + E ++ Y +T+ A D G S T VE+ + N PVF
Sbjct: 2127 GHFEINPNSGNVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVELPITI-VNKAMPVF 2185
Query: 156 QQNTYDVNVSEGASINSTVATI 177
+ Y +++E ++N+ + +I
Sbjct: 2186 DKPFYTASINEDITMNTPILSI 2207
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
+ +IAR G S+ + L D+NDN P + + + +++A D
Sbjct: 3098 YNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3157
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
D+G+N ++ YS+ S +G+ F ID SGVI L +Q Y+I+V+ATD G+S
Sbjct: 3158 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 3214
Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++ V++ V N PVF++ Y V V E S+ + V ++
Sbjct: 3215 LSSLASVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3257
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
LTVN+ D NDN P +Q +++ +I+++EA D DLG N E+ YS+
Sbjct: 816 LTVNVEDANDNNPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVMYSVL 870
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
T H+F I+ +G++ +L + YS+ ++A D Q V++ +
Sbjct: 871 ----TDTHQFIINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 926
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N SP F ++Y V V E + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
+ + V + D NDN P+ P QI+ E R+ I + A D D G NAEI+YSI
Sbjct: 1237 IWVVVQVLDENDNRPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDKDEGPNAEISYSIV 1295
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
++ G KF IDP++G++ + + AG +T++A D G +++ +E P
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353
Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
P+ F + Y+ V E + V ++V
Sbjct: 1354 PSPIPLTFDEPFYNFTVMESDKVTEIVGVVSV 1385
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 41 VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
V ++D+NDN+P + P I + + I+K+ A D D+G N +I YS+Y
Sbjct: 3016 VTVSDVNDNSPVCDQVAYSASLPEDIPS---NKIILKVSAKDADIGSNGDIRYSLY---G 3069
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
+G ++F +DP SG ++T L Y++ +ATD GG+ + V + ++ N P
Sbjct: 3070 SGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATDGGGRFCSSSV-LLLLEDVNDNPP 3128
Query: 154 VFQQNTYDVNVSEGASINSTVATI 177
VF N Y V E + + + +
Sbjct: 3129 VFSSNHYTACVYENTATKALLTRV 3152
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
++V ++ LDR+ + V A ++ G + S S+T+ + DINDN P L
Sbjct: 3185 VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYLV 3242
Query: 55 MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
+P + Q++ + AT D+G NAEITY I + G KF I+P++G I
Sbjct: 3243 TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFSINPKTGGISVLE 3296
Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
L ++ + V+A D G + T VS+ + N P F Q+ Y +SE A
Sbjct: 3297 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3353
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 8 NLDRDPPNPGKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQ 62
NLD + F F V R+ Q TA S PV + + + D+NDN P + + +
Sbjct: 1837 NLDHEAI--AHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLL 1893
Query: 63 AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
+++K+ ATD D V E+TYS+ S + F +DP +GV+ ++ + Y
Sbjct: 1894 PTYIGVEVLKVSATDPDSEVPPELTYSLMEGS---VDNFLMDPNTGVLTIKNNNLSKDHY 1950
Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ V+ +D GK T + +V F Q+ Y ++SE ++ + VA +
Sbjct: 1951 MLIVRVSD--GKFYSTAMVTVMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 2003
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 45 DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
D NDN P P + E +I++IEATD D +++Y+I+ + + K
Sbjct: 1451 DNNDNGPEFSQ-PHYDVTISEDVLPDTEILQIEATDRD--EKHKLSYTIHSSIDAVSMRK 1507
Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
FR+DP +GV+ T +L A +++ + + D + + V V V N SP F
Sbjct: 1508 FRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567
Query: 158 NTYDVNVSEGASINSTVATIT 178
Y+ +V E A++ S V +T
Sbjct: 1568 PLYEASVFESAALGSVVLQVT 1588
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)
Query: 19 FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRL--PMIPPIQIQAGEAR 67
F F+V AA++P V + V + D+NDN P I ++
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYETIIMEGMPVG 2829
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
++ ++ A D D G N ++TYS++ S++ L K F ID +G I T L
Sbjct: 2830 TKLAQVRAIDMDWGANGQVTYSLH--SDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPA 2887
Query: 122 YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+S V A+D G SS +V V V N +PVF Y NV E VA ++
Sbjct: 2888 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 31 TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
T A V++ + ++DINDN P P ++ ++++ +TD D G N + Y
Sbjct: 2264 TGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRY 2323
Query: 89 SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
I + F ID SG+I T +++ E ++ V ATD G SS+ +V++
Sbjct: 2324 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 2381
Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
+ N PVF Q Y+ VSE A V + S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
+V + LDR+ + + ++ AR+K G V+L + L+D+ND +P +P
Sbjct: 884 IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYS 941
Query: 59 IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
+++ + I +E D DLG+ ++ YS+ + N +F +D SG I + +L
Sbjct: 942 VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---RFEVDKASGAIRLSKELD 998
Query: 118 AGEQ--YSITVQATDTG 132
+Q Y++TV+A D G
Sbjct: 999 YEKQQFYNLTVRAKDKG 1015
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
+++ +K+G A + +T+ + D ND+ P + ++ ++ + A+D
Sbjct: 442 YKLEVSDKEGDAKA---QVTIGIEDANDHTPEFQEALYETFVNESVRVGTNVLTVSASDK 498
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
D G N ITYSI ++ L F I+ +GVI TT +L + E Y V+A+D G
Sbjct: 499 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPY 555
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ 157
++ V V++ V N SP+F++
Sbjct: 556 RHESEVNVTIRVGNVNDNSPLFEK 579
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 90 IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
IY V + ++ F I+P SGVI TT + + E Y + +QAT+ G +S + V +V
Sbjct: 1701 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIV 1759
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
N PVF + Y ++SE A INS V ++ S L
Sbjct: 1760 -DENDNPPVFLFSQYSGSLSEAAPINSIVRSLDNSPL 1795
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
++++ A D D G + EI YSI +GL +F ID SGVI L Y +TV
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVITAADSLDRETTASYWLTVY 1118
Query: 128 ATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
ATD G + +EV + V N +P+ + Y
Sbjct: 1119 ATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1152
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 23 VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
+I +G + + + D+ND P P + I ++ R + ++ ATD D+
Sbjct: 127 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 186
Query: 81 GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
G N E Y Y + L F + P SGVI +G+L E+ Y + + A D G K
Sbjct: 187 GSNGEFYY--YFKNKVDL--FSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 238
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
+V A + + S V + + ++D+NDN P +I + R V ++A+D
Sbjct: 2361 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
D + YSI +S F +D +SGV+ + K YS+ V +D G +S
Sbjct: 2421 DSSDLDRLEYSI--LSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 2477
Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
V + V+ G N SP F Q+TY V E A+ + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2514
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
I+KI+A D D G N ++ ++I NT F ID +G ++ + + Y + +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYVLNIT 801
Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
D G KSS ++ V+V N +PVF Q++Y V++ E +SI + + +
Sbjct: 802 IYDLGKPQKSSWRLLTVNV-EDANDNNPVFLQDSYSVSILESSSIGTEIIQV 852
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
F+I+PRSG+I T L + E Y + V + K+ TI + N +P FQ+
Sbjct: 419 FKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTI----GIEDANDHTPEFQEA 474
Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
Y+ V+E + + V T++ S G
Sbjct: 475 LYETFVNESVRVGTNVLTVSASDKDKG 501
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
+++ + ATD D G +++YSI +++ +F ID +G I TT +L + G+ S
Sbjct: 2513 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2568
Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
I ++A D GG+++ V V VV N +P F Y +V
Sbjct: 2569 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTVEYRASV 2608
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGKSSQTIVEVSVVPGPNTRSP 153
+F ID +GV++ L Y +TV+A+D TG ++ T+ +V N P
Sbjct: 2227 FQQFNIDFDTGVLKVISPLDYEVTSVYKLTVRASDALTGARAEVTVD--LLVDDINDNPP 2284
Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
VF Q TY+ +SE + I + V + + SG
Sbjct: 2285 VFDQPTYNTTLSESSLIGTPVLQLVSTDADSG 2316
Score = 33.5 bits (75), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 39 LTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
L V++ IN++AP + ++ P + E +V ++ D D G N EI S+ V
Sbjct: 251 LYVHIERINEHAPIIHVVSHTPFSLDK-EPTYAVVTVD--DLDEGANGEIE-SLSIVDGD 306
Query: 97 GLHKFRIDPRSGVIETTGKLIAGEQ---------YSITVQATDTGGKSSQTIVEVSVVPG 147
L +F + + G K+ Q Y++T+QA D G S Q E+ V
Sbjct: 307 PLEQFFL-AKEGKWLNEYKVKERRQVDWESFSYGYNLTIQAKDKG--SPQKFSELKTVHI 363
Query: 148 PNTR---SPV-FQQNTYDVNVSEGASINSTVATITVS 180
N R +PV F+++ Y+V++SE + VA + VS
Sbjct: 364 ANPRRDNTPVRFEKDVYEVSISEFSPPGVLVAIVKVS 400
>sp|Q5DRF0|PCDA2_PANTR Protocadherin alpha-2 OS=Pan troglodytes GN=PCDHA2 PE=3 SV=1
Length = 948
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 37 VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
V + + + D+NDN P + +++ A +VK+ A+D D G N+EI YS+ V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGSNSEIVYSLGSDV 285
Query: 94 SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
S+T KF IDP SG I T GKL E Y I V ATD G S ++S+ + N
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
+P + + +SE AS+ + +A ITVS SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----------ARR 68
+FQV AR+ V+L V + D NDNAP L + P AG A
Sbjct: 531 LQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWSVGAGH 589
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ K+ A D D G NA ++Y + + + FR+ +G I TT L
Sbjct: 590 VVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637
Score = 37.0 bits (84), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 41 VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
V + DINDN P PM + I+ +E A+D D+GVNA ++Y + S++
Sbjct: 121 VEVKDINDNPPVFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177
Query: 99 HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
I + E+ GK + E+ + + + ATD G V++ + V N
Sbjct: 178 FFLDIQTNDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
P F Q+ Y V + E + + V + S G
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 272
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
Y +V LDR+ + + V AR+ + S+++ + D+NDNAP P
Sbjct: 405 YSLVLDSALDRE--SVSAYELVVTARDGGSPSLWATTSVSIEVADVNDNAPAFAQ-PEYT 461
Query: 61 IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
+ E I + A D D NA ++YS+
Sbjct: 462 VFVKENNPPGCHIFTVSAWDADAQENALVSYSL 494
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
+ + S++ LDR+ + K+ +V A + + A+ V++ + + D+NDN+P+ +
Sbjct: 2964 WRISSRKTLDRE--HTAKYLLRVTASDGKFQAS---VTVEIFVLDVNDNSPQCSQL---- 3014
Query: 61 IQAGEARRQ------IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
+ G+ I+K+ ATD D NA+ITYS++ G H+F++DP +G + T
Sbjct: 3015 LYTGKVHEDVFPGHFILKVSATDLDTDTNAQITYSLH---GPGAHEFKLDPHTGELTTLT 3071
Query: 115 KLIAGEQ--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINS 172
L + +++ +ATD GG+S Q + + V N +P F + V V + ++ +
Sbjct: 3072 ALDRERKDVFNLVAKATDGGGRSCQADITLH-VEDVNDNAPRFFPSHCAVAVFDNTTVKT 3130
Query: 173 TVATI 177
VA +
Sbjct: 3131 PVAVV 3135
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 41 VNLNDINDNAPRLPMIPPIQI-QAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
V++ D+NDN P+ +P I Q G E + ++ ATD DLG N +TY
Sbjct: 2058 VSIEDVNDNPPKFKHLPYYTIIQDGTEPGDVLFQVSATDEDLGTNGAVTYEF----AEDY 2113
Query: 99 HKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQ 156
FRIDP G I A +Y + V A D G S Q+ EV +V N +P+FQ
Sbjct: 2114 TYFRIDPYLGDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEV-LVTVRNKSNPLFQ 2172
Query: 157 QNTYDVNVSEGASINSTV 174
Y V V E ++ + +
Sbjct: 2173 SPYYKVRVPENITLYTPI 2190
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 38 SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ VN+ D+N++ P+ P P ++ I+ + ATD D +N++ITYS+ +
Sbjct: 3306 TVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSL--IGG 3363
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
L F I P+ G ++ K + EQ YS+ ++ATD+G ++++ V N
Sbjct: 3364 NQLGHFTIHPKKGELQ-VAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDN 3422
Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
P F Q Y V E + I S V + +S
Sbjct: 3423 PPRFFQLNYSTTVQENSPIGSKVLQLILS 3451
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 16 PGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQI 70
P + V+ R+++ V +T+++ D N + PR + P I G ++
Sbjct: 1518 PSQHTLTVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPG---TEL 1574
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQA 128
+++ A D D GVNAE+ YS+ ++ G F I+ G+I KL +++TV+A
Sbjct: 1575 LQVRAMDADRGVNAEVHYSLLKGNSEGF--FNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 129 TDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATIT 178
D G + V + P+ RS P+F ++ Y V + E + S + ++
Sbjct: 1633 EDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVS 1683
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
L+ + + LDR+ N + +V + + + V + D+NDN P R
Sbjct: 1193 LLSTAQQLDRE--NKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVR 1250
Query: 53 LP-MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIE 111
LP + P+ + + ++ A+D D G+N +TYSI ++ F ID +GV+
Sbjct: 1251 LPERLSPV------SPGPVYRLVASDLDEGLNGRVTYSI---EDSDEEAFSIDLVTGVVS 1301
Query: 112 TTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRS-PV-FQQNTYDVNVSEG 167
++ AGE +T++ATD+G S+ + + +P P S P+ F + Y V E
Sbjct: 1302 SSSTFTAGEYNILTIKATDSGQPPLSASVRLHIEWIPWPRPSSIPLAFDETYYSFTVMET 1361
Query: 168 ASINSTVATITV 179
+N V I+V
Sbjct: 1362 DPVNHMVGVISV 1373
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQIVKIEATDN 78
F ++A+ G S +T+++ D+NDNAPR P + + + + + A D
Sbjct: 3081 FNLVAKATDGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDP 3140
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK-- 134
D G NA++ YS+ ++ F ID +GVI L Q +TV+A+D G
Sbjct: 3141 DQGANAQVVYSL---PDSAEGHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDLGTPIP 3197
Query: 135 -SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
S+ V VSVV G PVF + V V E A
Sbjct: 3198 LSTLGTVTVSVV-GLEDYLPVFLNTEHSVQVPEDA 3231
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEAT 76
++ V+A Q T VS+ + + D+NDN P P + + ++++ A
Sbjct: 2763 YQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAI 2822
Query: 77 DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
D D G + +++Y + + +H+ F ID SG I T +L + Y V A D G
Sbjct: 2823 DKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHVVAYDHGQ 2882
Query: 134 K---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
SSQ +V+VS+ N +P F Y +V E + VAT+
Sbjct: 2883 TIQLSSQALVQVSIT-DENDNAPRFASEEYRGSVVENSEPGELVATL 2928
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 38 SLTVNLNDINDNAPRLP-MIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ V + D+NDN P ++ I G A+ ++++ A+D D G N +++Y I +
Sbjct: 2257 TVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGS 2316
Query: 96 TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTR 151
F+I+ +G + T +L A + + + V+A D G + +T+V V+ V N
Sbjct: 2317 DVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVN-VSDINDN 2375
Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
P F+Q Y+ NVSE A+ V +
Sbjct: 2376 PPEFRQPQYEANVSELATCGHLVLKV 2401
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
Q++ + A D+D G++ E+ Y + + TGL F I+ +G+I+T L Y +TV
Sbjct: 1050 QVIVVAAQDDDSGLDGELQYFLR--AGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTV 1107
Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
A D G ++ EV + V N P Q + ++ E A + ++V +
Sbjct: 1108 LAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTSVLQL 1159
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEARRQIVKIEA 75
F +V A +K + + VN++DINDN P R P + ++K++A
Sbjct: 2344 HFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA 2403
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQYSITVQATDTGG 133
D D + + Y I +S F I+ SG+I K Y++ V A+D G
Sbjct: 2404 IDPDSRDTSRLEYLI--LSGNQDRHFFINSSSGIISMFNLCKKHLDSSYNLRVGASD--G 2459
Query: 134 KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
T+ N SP FQQ+ Y+ ++E A + + V
Sbjct: 2460 VFRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKV 2500
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
+ + + LDR+ +V+AR+ G A V + L D NDN P+ + I
Sbjct: 2537 IATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKII--LTDENDNPPQFKASEYTVSI 2594
Query: 62 QAGEARRQ-IVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGKLIA 118
Q+ ++ ++++ A D D G NA++TYS V+ L K I+P +GV++ L+
Sbjct: 2595 QSNVSKDSPVIQVLAYDADEGQNADVTYS---VNPEDLVKDVIEINPVTGVVKVKDSLVG 2651
Query: 119 GEQYSIT--VQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSE 166
E ++ ++A D G ++V V + P S P F + Y + E
Sbjct: 2652 LENQTLDFFIKAQDGGPPHWNSLVPVRLQVVPKKVSLPKFSEPLYTFSAPE 2702
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTG-LHKFRIDPRSGVIETTGKLIAG---EQYSI 124
++++++A D D G + Y+I+ + G F++DP SGV+ T GKL G Q+++
Sbjct: 1466 ELLRVQAIDQDKG--KSLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLDLGSGPSQHTL 1523
Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
TV D + V V++ V N P F Q Y+ +V +
Sbjct: 1524 TVMVRDQEIPIKRNFVWVTIHVEDGNLHPPRFTQLHYEASVPD 1566
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
+ V++ D ND P L P ++ E + I K+ ATD DLG NAE Y+ N
Sbjct: 134 VVVHILDQNDLKP-LFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAEFYYAF----N 188
Query: 96 TGLHKFRIDPRSGVIETTGKL 116
T F I P SGV+ GKL
Sbjct: 189 TRSEMFAIHPTSGVVTVAGKL 209
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPV 154
L F D ++GV+ TG L + ++ TV+ATDT G S+ VEV +V N P
Sbjct: 2213 LMLFTTDFKTGVLTVTGPLDYESKTKHVFTVRATDTALGSFSEATVEV-LVEDVNDNPPT 2271
Query: 155 FQQNTYDVNVSEGASINSTVATITVSRLASG 185
F Q Y ++SEG + V + S SG
Sbjct: 2272 FSQLVYTTSISEGLPAQTPVIQLLASDQDSG 2302
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHV 93
LTVN+ D NDNAPR PP Q E I ++ D D N + Y++ +
Sbjct: 806 LTVNVKDWNDNAPRF---PPGGYQLTISEDTEVGTTIAELTTKDADSEDNGRVRYTL--L 860
Query: 94 SNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQ 137
S T KF + P +G + TG L + +Y + V+A D K Q
Sbjct: 861 SPT--EKFSLHPLTGELVVTGHLDRESEPRYILKVEARDQPSKGHQ 904
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
+ ++ ATD D G N ++ Y I + G F I+ +G++ L A Y + V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGC--FDIELETGLLTVAAPLDYEATNFYILNVT 791
Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
D G KSS ++ V+V N +P F Y + +SE + +T+A +T
Sbjct: 792 VYDLGTPQKSSWKLLTVNVKDW-NDNAPRFPPGGYQLTISEDTEVGTTIAELT 843
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 27/126 (21%)
Query: 20 RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARRQ 69
+Q+ R G A++V V +++ D N++AP IPP
Sbjct: 428 HYQLHIRTSPGQASTVVV---IDIVDCNNHAPLFNRSSYDGTLDENIPP--------GTS 476
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITV 126
++ + ATD D G N +TYSI + F IDP G+I T+ + + Y+ V
Sbjct: 477 VLAVTATDRDHGENGYVTYSI---AGPKALPFSIDPYLGIISTSKPMDYELMKRIYTFRV 533
Query: 127 QATDTG 132
+A+D G
Sbjct: 534 RASDWG 539
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEA 75
+ V+A ++ S + + + D NDN P++ P IQ A +++++A
Sbjct: 1103 YWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDA-PVGTSVLQLDA 1161
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGG 133
D D ++T++I + G F I P +G++ T +L +++ + V D G
Sbjct: 1162 WDPDSSSKGKLTFNITSGNYMGF--FMIHPVTGLLSTAQQLDRENKDEHILEVTVLDNGE 1219
Query: 134 KSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGAS 169
S ++ V V + N P+F ++V + E S
Sbjct: 1220 PSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLS 1256
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 33/161 (20%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAP-------R 52
LVV+ +LDR+ + ++ +V AR++ +G L + L D+NDN+P R
Sbjct: 875 LVVTG-HLDRE--SEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 53 LPM---IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG 108
L + +PP + + ++A+D DLG E+ Y V G H FR+D +G
Sbjct: 932 LKVPEDLPPGTV--------LTFLDASDPDLGPAGEVRY----VLMDGAHGTFRVDLMTG 979
Query: 109 --VIETTGKLIAGEQYSITVQATDTGGK--SSQTIVEVSVV 145
++E Y++++ A+D GG+ + +T+ V V+
Sbjct: 980 ALILERELDFERRAGYNLSLWASD-GGRPLARRTLCHVEVI 1019
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 26 REKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-----QAGEARRQIVKIEATDNDL 80
REK+ VS+ + L ++NDN P M + Q + I+ + A D D
Sbjct: 544 REKE-------VSIFLQLRNLNDNQP---MFEEVNCTGSIRQDWPVGKSIMTMSAIDVDE 593
Query: 81 GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI---AGE--QYSITVQATDTGGKS 135
N + Y I VS L F ++ SGVI I AG+ YS+ + A+D +
Sbjct: 594 LQN--LKYEI--VSGNELEYFDLNHFSGVISLKRPFINLTAGQPTSYSLKITASDGKNYA 649
Query: 136 SQTIVEVSVVPGPNTRSPV 154
S T + ++VV P+ PV
Sbjct: 650 SPTTLNITVVKDPHFEVPV 668
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 84 AEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVE 141
+E+TY + + G+ F ++ SG+I T KL + Y + ++ ++ G + +V
Sbjct: 1688 SEVTYELREGNKDGV--FSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDVMVV 1745
Query: 142 VSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIMNKEENS 195
V ++ N +P+F ++T+ +SE A + S + + + +KE NS
Sbjct: 1746 VDII-DENDNAPMFLKSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKEANS 1798
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 19 FRFQVIAREKQGTA---ASVPVSLTVNLNDINDNAPRL-------PMIPPIQIQAGEARR 68
F+F V + QG+ A P + +++ D+ND+ PR ++ PI
Sbjct: 1836 FQFCVYVHD-QGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEVAIVGPIH-----PGM 1889
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQA 128
+++ + A+D D +E+ YSI + I P +G I G +T++A
Sbjct: 1890 ELLMVRASDED----SEVNYSIK--TGNADEAVTIHPVTGSISVLNPAFLGLSRKLTIRA 1943
Query: 129 TDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
+D G +V++S+ + +S F Q+ Y V E
Sbjct: 1944 SD-GLYQDTALVKISLTQVLD-KSLQFDQDVYWAAVKE 1979
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 101 FRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
F+++ R+G+I TT + ++ + + G++S T+V + +V N +P+F +++Y
Sbjct: 406 FKLNARTGLITTTKLMDFHDRAHYQLHIRTSPGQAS-TVVVIDIVDC-NNHAPLFNRSSY 463
Query: 161 DVNVSEGASINSTVATITVSRLASG 185
D + E ++V +T + G
Sbjct: 464 DGTLDENIPPGTSVLAVTATDRDHG 488
>sp|Q9Y5H9|PCDA2_HUMAN Protocadherin alpha-2 OS=Homo sapiens GN=PCDHA2 PE=1 SV=1
Length = 948
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 37 VSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR-RQIVKIEATDNDLGVNAEITYSI-YHV 93
V + + + D+NDN P + +++ A +VK+ A+D D G N+EI YS+ V
Sbjct: 226 VQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDV 285
Query: 94 SNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNT 150
S+T KF IDP SG I T GKL E Y I V ATD G S ++S+ + N
Sbjct: 286 SSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDIND 345
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
+P + + +SE AS+ + +A ITVS SG
Sbjct: 346 NTPEVSITSLSLPISENASLGTVIALITVSDRDSG 380
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE----------ARR 68
+FQV AR+ V+L V + D NDNAP L + P AG A
Sbjct: 531 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-LAPRAGTAAGAVSELVPWSVGAGH 589
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ K+ A D D G NA ++Y + + + FR+ +G I TT L
Sbjct: 590 VVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRAL 637
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 41 VNLNDINDNAPRLPM-IPPIQIQAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGL 98
V + DINDN P PM + I+ +E A+D D+GVNA ++Y + S++
Sbjct: 121 VEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKL---SSSEF 177
Query: 99 HKFRIDPRSGVIET----TGKLIAGEQYS---ITVQATDTGGKSSQTIVEVSV-VPGPNT 150
I + E+ GK + E+ + + + ATD G V++ + V N
Sbjct: 178 FFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVND 237
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
P F Q+ Y V + E + + V + S G
Sbjct: 238 NEPTFAQSVYKVKLLENTANGTLVVKLNASDADEG 272
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
Y +V LDR+ + + V AR+ + S+++ + D+NDNAP P
Sbjct: 405 YSLVLDSALDRE--SVSAYELVVTARDGGSPSLWATTSVSIEVADVNDNAPAFAQ-PEYT 461
Query: 61 IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
+ E I + A D D NA ++YS+
Sbjct: 462 VFVKENNPPGCHIFTVSAWDADAQENALVSYSL 494
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 8/183 (4%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
+++ E LDR+ P G + R G + ++ V + D NDNAP+ + +
Sbjct: 2551 IITTERLDRENPLEGDI--SIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTLEYRASV 2608
Query: 62 QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKF-RIDPRSGVIETTGKL--I 117
+A R +V +++A D D G N+ ITYS+Y ++ + IDP +G + T G +
Sbjct: 2609 RADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMVTKGNFNQL 2668
Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
S V+A D G +++ V + V P T P F Q+ Y ++E SI ST+ T
Sbjct: 2669 RNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTIAEDTSIGSTIDT 2728
Query: 177 ITV 179
+ +
Sbjct: 2729 LRI 2731
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 42 NLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
N+ D+NDN+P LP +Q+ A E I ++ A D D G N E+TY V
Sbjct: 2072 NIEDVNDNSPVFVGLPYYAAVQVDA-EPGTLIYRVTAIDKDKGANGEVTY----VLQDDY 2126
Query: 99 HKFRIDPRSGVI---ETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
F I+P SG + E ++ Y +T+ A D G S T VE+ + N PVF
Sbjct: 2127 GHFEINPNSGNVILKEAFNSDLSNIDYGVTILAKDGGTPSLSTFVELPITI-VNKAMPVF 2185
Query: 156 QQNTYDVNVSEGASINSTVATI 177
+ Y +++E SIN+ + +I
Sbjct: 2186 DKPFYTASINEDISINTPILSI 2207
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPI 59
++ + E LD + + K ++ R+++ + VN+ D ND++P P+
Sbjct: 1516 VLYTAERLDHEAQD--KHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEAS 1573
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGK--LI 117
++ ++++ A D D G NAE+ YSI NTG + F+I+P G+I + + +
Sbjct: 1574 VFESAALGSVVLQVTALDKDKGENAELIYSI-EAGNTG-NTFKIEPVLGIITISKEPDMT 1631
Query: 118 AGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
A Q+ ++V+ TD G S+ IV +S+ N+ P F Y V+E I ++V
Sbjct: 1632 AMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSH-PKFTHKDYQAEVNENVDIGTSVI 1690
Query: 176 TIT 178
I+
Sbjct: 1691 LIS 1693
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQ-------IQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
LTVN+ D NDN+P +Q +++ +I+++EA D DLG N E+TYS+
Sbjct: 816 LTVNVEDANDNSPVF-----LQDSYSVSILESSSIGTEIIQVEARDKDLGSNGEVTYSVL 870
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VP 146
T H+F I+ +G++ +L + YS+ ++A D Q V++ +
Sbjct: 871 ----TDTHQFVINSSTGIVYIADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLD 926
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N SP F ++Y V V E + + +A +
Sbjct: 927 DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWL 957
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQ-GTAASVPVSLTVNLNDINDNAP------RLP 54
++V ++ LDR+ + V A ++ G + S S+T+ + DINDN P L
Sbjct: 3185 VIVLEQPLDRE--QQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDYLV 3242
Query: 55 MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
+P + Q++ + AT D+G NAEITY I + G KFRI+P++G I
Sbjct: 3243 TVP----EDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG--KFRINPKTGGISVLE 3296
Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
L +++ + V+A D G + T VS+ + N P F Q+ Y +SE A
Sbjct: 3297 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3353
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDN 78
+ +IAR G ++ + L D+NDN P + + + +++A D
Sbjct: 3098 YNLIARATDGGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAVDP 3157
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-GKS 135
D+G+N ++ YS+ S +G+ F ID SGVI L +Q Y+I+V+ATD G+S
Sbjct: 3158 DVGINRKVVYSL-EDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQS 3214
Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++ V++ V N PVF++ Y V V E S+ + V ++
Sbjct: 3215 LSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSLGTQVLSV 3257
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 41 VNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
V ++D+NDN+P + P I + + I+K+ A D D+G N +I YS+Y N
Sbjct: 3016 VTVSDVNDNSPVCDQVAYSASLPEDIPS---NKIILKVSAKDADIGSNGDIRYSLYGSGN 3072
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRS 152
+ F +DP SG ++T L+ E+ Y++ +ATD GG+ + V + ++ N
Sbjct: 3073 S---DFFLDPESGELKTLA-LLDRERVPVYNLIARATDGGGRFCSSTV-LLLLEDVNDNP 3127
Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
PVF N Y V E + + + +
Sbjct: 3128 PVFSSNHYTACVYENTATKALLTRV 3152
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKIEATDNDLGVNAEITYSIY 91
+ + V + D NDN P+ P QI+ E R+ I + A D D G NAEI+YSI
Sbjct: 1237 IWVVVQVLDENDNKPQFPE-KVYQIKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIV 1295
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG----GKSSQTIVEVSVVPG 147
++ G KF IDP++G++ + + AG +T++A D G +++ +E P
Sbjct: 1296 DGNDDG--KFFIDPKTGMVSSRKQFTAGSYDILTIKAVDNGRPQKSSTARLHIEWIKKPP 1353
Query: 148 PNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
P+ F + Y+ + E + V ++V
Sbjct: 1354 PSPIPLTFDEPFYNFTIMESDKVTEIVGVVSV 1385
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 17 GKFRFQVIAREK---QGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIV 71
F F V R+ Q TA S PV + + + D+NDN P + + + +++
Sbjct: 1844 AHFHFHVHVRDSGNPQLTAES-PVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEVL 1902
Query: 72 KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDT 131
K+ ATD D V E+TYS+ S + F +DP +GV+ ++ + Y + V+ +D
Sbjct: 1903 KVSATDPDSEVPPELTYSLMEGS---VDHFLMDPNTGVLTIKNNNLSKDHYMLIVRVSD- 1958
Query: 132 GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
GK T + +V F Q+ Y ++SE ++ + VA +
Sbjct: 1959 -GKFYSTAMVTIMVKEAMDSGLHFTQSFYSTSISENSTNITKVAIV 2003
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 45 DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHK 100
D NDN P P + E +I++IEATD D +++Y+I+ + + K
Sbjct: 1451 DNNDNGPEFSQ-PHYDVTISEDVPPDTEILQIEATDRD--EKHKLSYTIHSSIDAISMRK 1507
Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQ 157
FRIDP +GV+ T +L A +++ + + D + + V V V N SP F
Sbjct: 1508 FRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTN 1567
Query: 158 NTYDVNVSEGASINSTVATIT 178
Y+ +V E A++ S V +T
Sbjct: 1568 PLYEASVFESAALGSVVLQVT 1588
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)
Query: 19 FRFQVIAREKQGTAASVP---------VSLTVNLNDINDNAPRLPM--IPPIQIQAGEAR 67
F F+V AA++P V + V + D+NDN P I ++
Sbjct: 2778 FHFKV--------AATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYETIIMEGMPVG 2829
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK----FRIDPRSGVIETTGKLI--AGEQ 121
++ ++ A D D G N ++TYS++ S++ L K F ID +G I T L
Sbjct: 2830 TKLAQVRAIDTDWGANGQVTYSLH--SDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPT 2887
Query: 122 YSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+S V A+D G SS +V V V N +PVF Y NV E VA ++
Sbjct: 2888 FSFFVVASDLGEAFSLSSMALVSVKVT-DINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 31 TAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITY 88
T A V++ + ++D+NDN P P ++ ++++ +TD D G N + Y
Sbjct: 2264 TGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTDADSGNNNLVHY 2323
Query: 89 SIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTG--GKSSQTIVEVS 143
I + F ID SG+I T +++ E ++ V ATD G SS+ +V++
Sbjct: 2324 QIVQDTYNSTDYFHIDSSSGLI-LTARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQI- 2381
Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
+ N PVF Q Y+ VSE A V + S
Sbjct: 2382 YISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQAS 2418
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREK--QGTAASVPVSLTVNLNDINDNAPR-LPMIPP 58
+V + LDR+ + + ++ AR+K G V+L + L+D+ND +P +P
Sbjct: 884 IVYIADQLDRE--SKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYS 941
Query: 59 IQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
+++ + I +E D DLG+ ++ YS+ + N +F ID SG I + +L
Sbjct: 942 VKVLEDLPVGTVIAWLETQDPDLGLGGQVRYSLVNDYNG---RFEIDKASGAIRLSKELD 998
Query: 118 AGEQ--YSITVQATDTG 132
+Q Y++TV+A D G
Sbjct: 999 YEKQQFYNLTVRAKDKG 1015
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 90 IYHVSNTGLHK-FRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGGKSSQTIVEVSVV 145
IY V + ++ F I+P SGVI TT + + E Y + +QAT+ G +S V V VV
Sbjct: 1701 IYEVKDGNINGVFTINPYSGVI-TTRRALDYEHTSSYQLIIQATNMAGMASNATVSVQVV 1759
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
N PVF + Y ++SE A INS V ++ S L
Sbjct: 1760 -DENDNPPVFLFSQYSGSLSEAAPINSLVRSLDNSPL 1795
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDN 78
+++ +K+G A + +T+ + D ND+ P + ++ ++ + A+D
Sbjct: 442 YKLEVSDKEGDAKA---QVTIGIEDANDHTPEFQETLYETFVNESVPVGTNVLTVSASDK 498
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG-K 134
D G N ITYSI ++ L F I+ +GVI TT +L + E Y V+A+D G
Sbjct: 499 DKGENGYITYSI---ASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDWGSPY 555
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQ 157
++ V V++ V N SP+F++
Sbjct: 556 RHESEVNVTIRVGNVNDNSPLFEK 579
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITV 126
++++ A D D G + EI YSI +GL +F ID SGVI T ++ E Y +TV
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIR--DGSGLGRFNIDDESGVI-TAADILDRETTASYWLTV 1117
Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTY 160
ATD G + +EV + V N +P+ + Y
Sbjct: 1118 YATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1152
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 23 VIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEARRQIVKIEATDNDL 80
+I +G + + + D+ND P P + I ++ R + ++ ATD D+
Sbjct: 127 IIKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQVTATDADI 186
Query: 81 GVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGK 134
G N E Y Y + L F + P SGVI +G+L E+ Y + + A D G K
Sbjct: 187 GSNGEFYY--YFKNKVDL--FSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMK 238
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIVK-IEATDN 78
+V A + + S V + + ++D+NDN P +I + R V ++A+D
Sbjct: 2361 LKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDA 2420
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTGGKSS 136
D + YSI +S F +D +SGV+ + K YS+ V +D G +S
Sbjct: 2421 DSSDFDRLEYSI--LSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSD-GLFTS 2477
Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
V + V+ G N SP F Q+TY V E A+ + V
Sbjct: 2478 TAQVHIRVL-GANLYSPAFSQSTYVAEVRENAASGTKV 2514
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQ 127
I+KI+A D D G N ++ ++I NT F ID +G ++ + + Y + +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISD-GNTD-SCFNIDMETGQLKVLMPMDREHTDLYVLNIT 801
Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
D G KSS ++ V+V N SPVF Q++Y V++ E +SI + + +
Sbjct: 802 IYDLGKPQKSSWRLLTVNV-EDANDNSPVFLQDSYSVSILESSSIGTEIIQV 852
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 101 FRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
F+I+PRSG+I T L + E Y + V + K+ TI + N +P FQ+
Sbjct: 419 FKINPRSGLIVTAQPLNTVKKEVYKLEVSDKEGDAKAQVTI----GIEDANDHTPEFQET 474
Query: 159 TYDVNVSEGASINSTVATITVSRLASG 185
Y+ V+E + + V T++ S G
Sbjct: 475 LYETFVNESVPVGTNVLTVSASDKDKG 501
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-----IAGEQYS 123
+++ + ATD D G +++YSI +++ +F ID +G I TT +L + G+ S
Sbjct: 2513 KVIHVRATDGDPGTYGQVSYSI--INDFAKDRFLID-SNGQIITTERLDRENPLEGD-IS 2568
Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
I ++A D GG+++ V V VV N +P F Y +V
Sbjct: 2569 IYLRALDGGGRTTFCTVRVIVV-DENDNAPQFMTLEYRASV 2608
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 98 LHKFRIDPRSGVIETTGKLI--AGEQYSITVQATD--TGGKSSQTIVEVSVVPGPNTRSP 153
+F ID +GV++ L Y +TV+A+D TG ++ T+ +V N P
Sbjct: 2227 FQQFNIDFDTGVLKVISPLDYEVMSVYKLTVRASDALTGARAEVTVD--LLVDDVNDNPP 2284
Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASG 185
VF Q TY+ +SE + I + V + + SG
Sbjct: 2285 VFDQPTYNTTLSESSLIGTPVLQLVSTDADSG 2316
Score = 33.5 bits (75), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 39 LTVNLNDINDNAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
L V++ IN++AP + ++ P + E +V ++ D D G N EI S+ V
Sbjct: 251 LYVHIERINEHAPIIHVVTHTPFSLDK-EPTYAVVTVD--DLDEGANGEIE-SVSIVDGD 306
Query: 97 GLHKFRIDPRSGVIETTGKLIAGEQ---------YSITVQATDTGGKSSQTIVEVSVVPG 147
L +F + + G K+ Q Y++T+QA D G S Q E+ V
Sbjct: 307 PLEQFFL-AKEGKWMNEYKVKERRQVDWESFSYGYNLTIQAKDKG--SPQKFSELKTVHI 363
Query: 148 PNTR---SPV-FQQNTYDVNVSEGASINSTVATITV 179
N R +P+ F+++ YD+++SE + VA + V
Sbjct: 364 ANPRRDSTPIKFEKDVYDISISEFSPPGVMVAIVKV 399
>sp|Q5DRF3|PCDAB_PANTR Protocadherin alpha-11 OS=Pan troglodytes GN=PCDHA11 PE=3 SV=1
Length = 949
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-PIQI 61
++ K++LDR+ + V A + + V L V + D+NDN P + +
Sbjct: 194 LILKKSLDRE--KTPELNLMVTATDGGKPELTGTVRLLVQVLDVNDNDPDFDKSEYKVSL 251
Query: 62 QAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
A+ +V K+ ATD D GVN E+TYS+ + G H F +D +G + G L E
Sbjct: 252 MENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEE 311
Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
Y I VQATD G + V V ++ N SP + + V E A ++ +A
Sbjct: 312 NKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTNDNSPEVAVTSLSLPVREDAQPSTVIAL 370
Query: 177 ITVSRLASG 185
I+VS SG
Sbjct: 371 ISVSDRDSG 379
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
++ +V A +K + ++ V + D NDN+P + + P++ A + I I
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373
Query: 76 TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
+D D GVN ++T S+ HV + F+ + S V+++ + Y + V A D G
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRESVWAYELVVTARDGGSP 432
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
S VSV V N +P F Q Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 19/112 (16%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
+FQV AR+ V+L V + D NDNAP L + QAG A
Sbjct: 530 LQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584
Query: 68 ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ K+ A D D G NA ++Y + + FR+ +G I TT L
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRAL 636
>sp|Q5DRD6|PCDBD_PANTR Protocadherin beta-13 OS=Pan troglodytes GN=PCDHB13 PE=3 SV=1
Length = 798
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
+V + LDR+ + R + A + S + + + D+NDNAP P ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251
Query: 63 AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
E +VK+ ATD D GVN EI+YS++ S F+I+P +G IE +L
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311
Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ Y + ++A D G S + V + V+ N +P + + + E A + VA
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369
Query: 178 TVSRLASG 185
+VS L SG
Sbjct: 370 SVSDLDSG 377
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
Y ++++ LDR+ + ++ + + +++TV + D+NDNAP
Sbjct: 401 YTLLTERPLDRE--SRAEYNITITVTDLGTPMLKTQLNMTVLIADVNDNAPAFTQTSYTL 458
Query: 61 I--QAGEARRQIVKIEATDNDLGVNAEITYSIY-----HVSNTGLHKFRIDPRSGVIETT 113
+ I + ATD D G NA++TYS+ H+ T L D +
Sbjct: 459 FVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRS 518
Query: 114 GKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
A + + V A+D G SS+ +V V V+ N SP
Sbjct: 519 LDYEALQGFEFRVGASDHGSPALSSEALVRVLVLDA-NDNSPF 560
>sp|Q9Y5I1|PCDAB_HUMAN Protocadherin alpha-11 OS=Homo sapiens GN=PCDHA11 PE=2 SV=1
Length = 949
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 37 VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVS 94
V L V + D+NDN P + + A+ +V K+ ATD D GVN E+TYS+ +
Sbjct: 226 VRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIK 285
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
G H F +D +G + G L E Y I VQATD G + V V ++ N
Sbjct: 286 PNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEIL-DTND 344
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
SP + + V E A ++ +A I+VS SG
Sbjct: 345 NSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSG 379
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 19/112 (16%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR----------- 67
+FQV AR+ S V+L V + D NDNAP L + QAG A
Sbjct: 530 LQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPAL-----LATQAGSAGGAVNKLVPRSV 584
Query: 68 ---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ K+ A D D G NA ++Y + + FR+ +G I TT L
Sbjct: 585 GAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRAL 636
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP---PIQIQAGEARRQIVKIEA 75
++ +V A +K + ++ V + D NDN+P + + P++ A + I I
Sbjct: 315 YKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDA-QPSTVIALISV 373
Query: 76 TDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGK 134
+D D GVN ++T S+ HV + F+ + S V+++ Y + V A D G
Sbjct: 374 SDRDSGVNGQVTCSLTPHVPFKLVSTFK-NYYSLVLDSALDRENVWAYELVVTARDGGSP 432
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
S VSV V N +P F Q Y V V E
Sbjct: 433 SLWATARVSVEVADVNDNAPAFAQPEYTVFVKE 465
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
Y +V LDR+ N + V AR+ + ++V + D+NDNAP P
Sbjct: 404 YSLVLDSALDRE--NVWAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQ-PEYT 460
Query: 61 IQAGEAR---RQIVKIEATDNDLGVNAEITYSI 90
+ E I + A D D NA ++YS+
Sbjct: 461 VFVKENNPPGCHIFTVSARDADAQENALVSYSL 493
>sp|Q9Y5F0|PCDBD_HUMAN Protocadherin beta-13 OS=Homo sapiens GN=PCDHB13 PE=2 SV=1
Length = 798
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
+V + LDR+ + R + A + S + + + D+NDNAP P ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQ-PFYRVQ 251
Query: 63 AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
E +VK+ ATD D GVN EI+YS++ S F+I+P +G IE +L
Sbjct: 252 ISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFE 311
Query: 120 --EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ Y + ++A D G S + V + V+ N +P + + + E A + VA
Sbjct: 312 KLQSYEVNIEARDAGTFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369
Query: 178 TVSRLASG 185
+VS L SG
Sbjct: 370 SVSDLDSG 377
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
+++TV + D+NDNAP + I + ATD D G NA++TYS+
Sbjct: 435 LNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQ 494
Query: 92 --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
H+ T L D + A + + V A+D G SS+ +V V VV
Sbjct: 495 DPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVRV-VVLD 553
Query: 148 PNTRSPV 154
N SP
Sbjct: 554 ANDNSPF 560
>sp|Q5DRC6|PCDB8_PANTR Protocadherin beta-8 OS=Pan troglodytes GN=PCDHB8 PE=3 SV=1
Length = 801
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
+V + LDR+ + R + A + S + + + D+NDNAP P ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251
Query: 63 AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
E +VK+ ATD D GVN EI+YS++ S+ F++D +G I +L
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311
Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ Y + ++A D GG S + V + V+ N +P + + + E A + VA
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369
Query: 178 TVSRLASG 185
+VS L SG
Sbjct: 370 SVSDLDSG 377
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
+++TV ++D+NDNAP + I + ATD D G NA++TYS+
Sbjct: 436 LNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
Query: 92 --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
H+ L D + A + + V A+D G SS+ +V V V+
Sbjct: 496 NPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDA 555
Query: 148 PNTRSPV 154
N SP
Sbjct: 556 -NDNSPF 561
>sp|Q9UN66|PCDB8_HUMAN Protocadherin beta-8 OS=Homo sapiens GN=PCDHB8 PE=2 SV=3
Length = 801
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
+V + LDR+ + R + A + S + + + D+NDNAP P ++Q
Sbjct: 195 LVLDKALDRE--EEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQ-PFYRVQ 251
Query: 63 AGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
E +VK+ ATD D GVN EI+YS++ S+ F++D +G I +L
Sbjct: 252 ISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLDFE 311
Query: 118 AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ Y + ++A D GG S + V + V+ N +P + + + E A + VA
Sbjct: 312 KFQSYEVNIEARDAGGFSGKCTVLIQVI-DVNDHAPEVTMSAFTSPIPENAP-ETVVALF 369
Query: 178 TVSRLASG 185
+VS L SG
Sbjct: 370 SVSDLDSG 377
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQI--QAGEARRQIVKIEATDNDLGVNAEITYSIY--- 91
+++TV ++D+NDNAP + I + ATD D G NA++TYS+
Sbjct: 436 LNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQ 495
Query: 92 --HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPG 147
H+ L D + A + + V A+D G SS+ +V V V+
Sbjct: 496 DPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDA 555
Query: 148 PNTRSPV 154
N SP
Sbjct: 556 -NDNSPF 561
>sp|Q967F4|HMR1_CAEEL Cadherin-related hmr-1 OS=Caenorhabditis elegans GN=hmr-1 PE=1 SV=1
Length = 2920
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 38 SLTVNLNDINDNAPRLPMIPPI----QIQAGEARRQ---IVKIEATDNDLGVNAEITYSI 90
+L + + D+N+N P P +I G + IVK+EATD+D N +I YS+
Sbjct: 850 TLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSL 909
Query: 91 YHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGKSSQTIVEVSV-V 145
Y+ + F ID ++GV+ + ++ + +TV+ATD G + + SV V
Sbjct: 910 YYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV 969
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N SP F++ +Y+ +VS ++ ++V T+
Sbjct: 970 VDINDNSPQFERPSYETSVSRFEAVGTSVITV 1001
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 9 LDRDPP-NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQ----- 60
LDRDPP + F V A + G + VN+ DINDN+P P + I+
Sbjct: 1501 LDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREP 1560
Query: 61 IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN---TGLHKFRIDPRSGVIETTGKL- 116
I + V+ D+ NA I Y I V N G FRID +G I L
Sbjct: 1561 IHSDGVYFMDVQARDFDDPTTENANIEYGI--VRNKLINGESVFRIDQNTGKIFAMRSLD 1618
Query: 117 --IAGE-QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINS 172
I+ E ++ I V+A D G S + V++ V N +P F++ Y+ +V E A I +
Sbjct: 1619 REISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGA 1678
Query: 173 TVATIT 178
V + +
Sbjct: 1679 AVMSFS 1684
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 12 DPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARR 68
DP P + +V ARE + V LT+ ++D+NDN P P Q E +
Sbjct: 604 DPALPKLHKLKVTAREDNRESH---VDLTIRIDDVNDNVPTFTR-PLYTAQVREDIPLNQ 659
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------Y 122
I+K+ A D D G N+ ITYS+ + H F I+ +G I +L A + Y
Sbjct: 660 TILKVTAVDKDTGDNSRITYSVDN------HNFSINS-NGEISAKVRLDADQLNERHFVY 712
Query: 123 SITVQATDTG 132
V A D G
Sbjct: 713 RFNVTARDHG 722
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 38 SLTVNLNDIND-----NAPRLPMIP--PIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
++ +++ DI++ N+P LPM+ P+ G Q V A D ++ + Y
Sbjct: 408 TIRIHVADIDEPPSFVNSP-LPMLAVVPLNPTIGRIVYQFV---ARDEHGDGDSNVLYKT 463
Query: 91 YHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYSITVQATDTGGKSSQT--IVEVSVVP- 146
V G F +DP+SGV+ T K G+ Y I+ QA D + T + EV+++
Sbjct: 464 IDVIPAG--SFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEI 521
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
+ R P F + Y+V VSE ++ +V + S
Sbjct: 522 LADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRS 559
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 37 VSLTVNLNDINDNAPRL---PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHV 93
V + + +ND+NDNAP I ++ GE ++ I+A D D N YH+
Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKESEGEG-HDVITIKAHDLDKHSNLR-----YHL 1372
Query: 94 SNTGLHK--FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPN 149
G + F + SG I L A +QY + + A+D G+ + T + N
Sbjct: 1373 IGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASD--GRHNATTNVYIHIEDVN 1430
Query: 150 TRSPVFQQNTYDVNVSE 166
+P F+Q Y V E
Sbjct: 1431 DNAPQFEQQKYATTVIE 1447
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSI 90
+V + DINDN+P+ P + ++ + A DND NAEITYS+
Sbjct: 965 FSVEVVDINDNSPQFER-PSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSL 1018
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL----------PMIPPIQIQAGEARR 68
+ + AR+ S L + +ND+NDNAP+ +PP
Sbjct: 6 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 57
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITV 126
+++I ATD D G+N + Y+ + + G F ++ SG++ T +L QY +
Sbjct: 58 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRA 116
Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
A D G ++T +EV+V V N PVF+Q+ +DV V E + I VA +T +
Sbjct: 117 YAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 171
Score = 38.5 bits (88), Expect = 0.026, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
+V + LDR+ N ++ + A +K A P+ +TV + D+NDN P
Sbjct: 97 IVRTLRRLDRE--NVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 154
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
+ + ++ ATD D G NA+I Y I V F++D SG + L
Sbjct: 155 VEENSPIGLAVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTALVDLDYE 212
Query: 120 E--QYSITVQATDTGGKSSQTI 139
+ +Y + +QAT S T+
Sbjct: 213 DRPEYILVIQATSAPLVSRATV 234
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 9 LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
LDRD PN ++RF V A+++ G + VNL DINDNAP+ P + G
Sbjct: 377 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFGNVTENGT 436
Query: 66 ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
A ++ + A D D NA++ YSI TG F I+P +G+I+T +
Sbjct: 437 AGSSVMTMSAVDYDDPNESTNAKLIYSIEKNVIEEETGAPIFEIEPETGLIKTAVCCLDR 496
Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
E+ YSI V A D GG + V N P F ++ + +V+ + G I T
Sbjct: 497 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDLNDMPPQFTKDEWVTEVDETNGTYIPETP 555
Query: 174 VATITV 179
+ T+TV
Sbjct: 556 ILTVTV 561
Score = 36.6 bits (83), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 12 DPPNPGKFRFQVIAREKQ----GTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAG 64
DP FRF++ +K G + V+ + V L DINDN P+ I++
Sbjct: 607 DPLQSSGFRFRIQVNDKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDR-EHIEVSIY 665
Query: 65 EARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGE 120
E + + + +ATD D G ++++ Y I +N +F I R V I+ +
Sbjct: 666 EDTKVGTILEQFKATDADQGGHSKVAYKIVRSTNRK-RQFAISDRGAVSIQRPLDRETQD 724
Query: 121 QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQN 158
++ I + A D G + ++V V N +P F Q+
Sbjct: 725 RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQD 763
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
LDR+ + + Q++A + A + +LTV + D+NDNAP + + +
Sbjct: 718 LDRETQD--RHHIQILAIDDGSPARTATATLTVIVKDVNDNAPTFAQDYKPTLPENVSGK 775
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP 105
+I+++ A D D + N G FR+DP
Sbjct: 776 KILEVAAKDPDDRLRG----------NGGPFTFRLDP 802
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-------RL 53
YLV LDR+ + + +V A + + +++ D+NDNAP R
Sbjct: 422 YLVCVARRLDREERD--AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRP 479
Query: 54 PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
+P + + +V++ A D D G N ++TYS+ ++T H F IDP SG+I T
Sbjct: 480 EPLPEVALPG----SFVVRVTARDPDQGTNGQVTYSLAPGAHT--HWFSIDPTSGIITTA 533
Query: 114 GKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASI 170
L Q + V ATD G + VSV + N P FQ+ Y+ ++ EG
Sbjct: 534 ASLDYELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQP 593
Query: 171 NSTVATITVSRLASG 185
+ +T + SG
Sbjct: 594 GTCFLQVTATDADSG 608
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 18 KFRFQVIARE--KQGTAASVPVSLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKI 73
+++ Q++A + +G A +LTV + D+NDNAP + + ++ I+ +
Sbjct: 2344 RYQLQLLAHDGPHEGRA-----NLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSV 2398
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQYS----ITVQA 128
ATD D G N I+Y + ++ F +DP +G + T G + G S + ++A
Sbjct: 2399 SATDRDSGANGHISYHLASPAD----GFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEA 2454
Query: 129 TDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
D G G++++ V V + N +P F + Y V V+E ST+ T+
Sbjct: 2455 RDHGAPGRAARATVHVQLQ-DQNDHAPSFTLSHYRVAVTEDLPPGSTLLTL 2504
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
F+ ++ AR+ A S + LTV + D ND+AP P +P ++ E A +++++A
Sbjct: 1821 FQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFP-VPAYSVEVPEDVPAGTLLLQLQA 1879
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATD--T 131
D D G N +TY Y + T F ++P SG + T L + Y+ +V A D
Sbjct: 1880 HDPDAGANGHVTY--YLGAGTA-GAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAA 1936
Query: 132 GGKSSQTIVEVSVVPGPNTRSPVF 155
G S T+ V N +P F
Sbjct: 1937 AGPLSTTVSVTITVRDVNDHAPTF 1960
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 20 RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATD 77
R +++ + + G A + V LT+ L D NDNAPR P ++ ++++EA D
Sbjct: 2139 RLRLVLQAESGGAFAFTV-LTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADD 2197
Query: 78 NDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG-- 132
D G +I+YS+ S F +DP +G I TT L I E + + ATD G
Sbjct: 2198 LDQGSGGQISYSLA-ASQPARGLFHVDPTTGTITTTAILDREIWAET-RLVLMATDRGSP 2255
Query: 133 ---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGCAIM 189
G ++ T++ + N P Q +++ VSE A + S +A +T + + SG +
Sbjct: 2256 ALVGSATLTVMVIDT----NDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSGPVLW 2310
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-------IVKIEATDNDLGVNAEITYSIY 91
LTV++ D+ND AP Q + R+ ++ + ATD D+G N ++TY
Sbjct: 1635 LTVSVADVNDEAPTF-----QQQEYSVLLRENNPPGTSLLTLRATDPDVGANGQVTYG-- 1687
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGGKSSQTIVEVSV-VPGP 148
VS+ F +DP +GV+ T L EQ I TV A D G T V V V V
Sbjct: 1688 GVSS---ESFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDE 1744
Query: 149 NTRSPVFQQNTYDVNVSEG 167
N +P F + V EG
Sbjct: 1745 NDHAPTFGSAHLSLEVPEG 1763
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
LVV+ E LDR+ N + Q+ A + L V L DIND+AP R +
Sbjct: 207 LVVTGE-LDRE--NRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAV 263
Query: 57 PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
+ G ++++ A+D D GVN +TY I + G F ID +G+++ L
Sbjct: 264 VSESLAPGSP---VLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHTGLLQLERPL 320
Query: 117 IAGEQ--YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP----VFQQNTYDVNVSEGAS 169
++ + + VQA D G V+V V N P +F VSE A
Sbjct: 321 DFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIFLSADGSPQVSEAAP 380
Query: 170 INSTVATITVS 180
VA I+VS
Sbjct: 381 PGQLVARISVS 391
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 41 VNLNDINDNAPRLP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
V L+D+NDN+P P ++PP I + A D D GVN+ +T+++
Sbjct: 882 VLLDDVNDNSPAFPAPEDTVLLPPNTAPG----TPIYTLRALDPDSGVNSRVTFTLL--- 934
Query: 95 NTGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSVV---PGPN 149
G F +DP +G + L G + + ++A D G + + VV G
Sbjct: 935 AGGGGAFTVDPTTGHVRLMRPLGPSGGPAHELELEARDGGSPPRTSHFRLRVVVQDVGTR 994
Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATI 177
+P F TY V++ G + + V +
Sbjct: 995 GLAPRFNSPTYRVDLPSGTTAGTQVLQV 1022
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
+ ++ ATD D G N +TYS+ +S FRI P++G + T L +Q Y + VQ
Sbjct: 1124 VGRVFATDRDSGPNGRLTYSLQQLSEDS-KAFRIHPQTGEVTTLQTLDREQQSSYQLLVQ 1182
Query: 128 ATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQ 157
D G +S+ V V+V+ N SP F Q
Sbjct: 1183 VQDGGSPPRSTTGTVHVAVL-DLNDNSPTFLQ 1213
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 31/198 (15%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI-PPIQI 61
V+ +E DR +RF + T V +TV + DIND+AP P +Q+
Sbjct: 106 VLDREQRDR-------YRFTAV------TPDGATVEVTVRVADINDHAPAFPQARAALQV 152
Query: 62 QAGEARRQIVKIE-ATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIET------- 112
A +E A D D G + Y +S G + FR++ R G T
Sbjct: 153 PEHTAFGTRYPLEPARDADAG---RLGTQGYALSGDGAGETFRLETRPGPDGTPVPELVV 209
Query: 113 TGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
TG+L Y + ++A D G + +Q +++V+++ N +P F Q+ Y VSE
Sbjct: 210 TGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL-DINDHAPAFNQSRYHAVVSESL 268
Query: 169 SINSTVATITVSRLASGC 186
+ S V + S +G
Sbjct: 269 APGSPVLQVFASDADAGV 286
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 23/147 (15%)
Query: 43 LNDINDNAP--------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
+ D NDNAP RLP P G A +V A D DLG A ++Y + +
Sbjct: 1536 VTDENDNAPVFASPSRVRLPEDQP----PGPAALHVV---ARDPDLGEAARVSYRL---A 1585
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
+ G FR+ +G + L + ++ +TV A+D G +S+ ++ VSV N
Sbjct: 1586 SGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVVASDHGSPPRSATQVLTVSVA-DVND 1644
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATI 177
+P FQQ Y V + E +++ T+
Sbjct: 1645 EAPTFQQQEYSVLLRENNPPGTSLLTL 1671
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 26/165 (15%)
Query: 20 RFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGEARRQ-----IVKI 73
R Q++ + A ++ +T+ + D+ND+ P P+ + A Q + +
Sbjct: 2672 RHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLN---LLSTSVAENQPPGTLVTTL 2728
Query: 74 EATDNDLGVNAEITYSIYHVSN--TGLHKFRIDPRSGVIETTGKLIA--------GEQYS 123
A D D G + YS+ G F ++ +TG+L A E +
Sbjct: 2729 HAIDGDAGAFGRLRYSLLEAGPGPEGREAFALN------SSTGELRARVPFDYEHTESFR 2782
Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
+ V A D G S+ V V +V G + PVF + V EGA
Sbjct: 2783 LLVGAADAGNLSASVTVSV-LVTGEDEYDPVFLAPAFHFQVPEGA 2826
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 37 VSLTVNLNDINDNAPRLPMIP-PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
V++ V + D ND+AP +++ G+ + + + A+D D+G N ++ Y I
Sbjct: 1735 VTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDP 1794
Query: 96 TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKS-SQTIVEVSVVPGPNTRS 152
+G F +D SG T L + + ++A D G + S T++ V N +
Sbjct: 1795 SG--AFVLDLASGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHA 1852
Query: 153 PVFQQNTYDVNVSE 166
P F Y V V E
Sbjct: 1853 PAFPVPAYSVEVPE 1866
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 20 RFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEAT 76
R ++A ++ A +LTV + D NDN P +P P +++ E +I ++
Sbjct: 2244 RLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQ--PWELRVSEDALLGSEIAQVTGN 2301
Query: 77 DNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTGKLI--AGEQYSITVQATDTG- 132
D D G Y +S +G F + G + TG L ++Y + + A D
Sbjct: 2302 DVDSG-----PVLWYVLSPSGPQDPFSVGRYGGRVSLTGPLDFEQCDRYQLQLLAHDGPH 2356
Query: 133 -GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
G+++ T++ V N +P F Q+ Y V + E S + +++ + SG
Sbjct: 2357 EGRANLTVLVEDV----NDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGA 2407
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 34 SVPVSLTVNLNDINDNAPRLPMIPPIQIQA-------GEARRQIVKIEATDNDLGVNAEI 86
S VS+T+ + D+ND+AP P P++++ + + A D D G NA I
Sbjct: 1941 STTVSVTITVRDVNDHAPTFPTS-PLRLRLPRPGPSFSTPTLALATLRAEDRDAGANASI 1999
Query: 87 TYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQATDTGGKS-SQTIVEVS 143
+Y ++ T +D +G I +A + + ATD G + S T V +
Sbjct: 2000 ---LYRLAGTPPPGTTVDSYTGEIRVARSPVALGPRDRVLFIVATDLGRPARSATGVIIV 2056
Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGA 168
+ G R P F + + + + E A
Sbjct: 2057 GLQGEAERGPRFPRASSEATIRENA 2081
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 45 DINDNAPRLPMIPPIQIQAG---------EARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
D+NDN PP+ +A +++ +EA+D D G + + +++
Sbjct: 2594 DVNDN-------PPVFTRASYRVTVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDP 2646
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKS---SQTIVEVSVVPGPNT 150
+GL F +D SG + L Q + + VQA D G + +EV V N
Sbjct: 2647 SGL--FELDESSGTLRLAHALDCETQARHQLVVQAADPAGAHFALAPVTIEVQDV---ND 2701
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATI 177
P F N +V+E + V T+
Sbjct: 2702 HGPAFPLNLLSTSVAENQPPGTLVTTL 2728
>sp|Q13634|CAD18_HUMAN Cadherin-18 OS=Homo sapiens GN=CDH18 PE=2 SV=1
Length = 790
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
+ S ++LDR+ Q I R + + + DINDNAP+ P
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168
Query: 58 PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
P G + Q+ +A D G +A + YSI G F +DP++GVI T +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224
Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
A E YS+ +QA D GG S T V +++ N P F Q Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283
Query: 171 NSTVATITVSRLASG 185
S V I + +G
Sbjct: 284 GSAVGKIKANDADTG 298
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 7 ENLDRDPPNPGKFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIP 57
N+DR+ + + V+ A++ G + S TVN L D+NDN PR P +
Sbjct: 222 HNMDRE----AREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYV 277
Query: 58 PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGK 115
P Q G A + KI+A D D G NA++TYSI + G+ D R G++
Sbjct: 278 PESAQVGSA---VGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP 334
Query: 116 L-----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNV 164
L I G + + + G T++++ V G P+F +Y + V
Sbjct: 335 LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYLMEV 392
Query: 165 SEGASINSTVATI 177
E A I + V T+
Sbjct: 393 YENAKIGTVVGTV 405
>sp|Q08DJ5|CAD18_BOVIN Cadherin-18 OS=Bos taurus GN=CDH18 PE=2 SV=1
Length = 790
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----- 57
+ S ++LDR+ Q I R + + + DINDNAP+ P
Sbjct: 110 IHSTKSLDREQKTHYVLHAQAIDR-RTNKPLEPESEFIIKVQDINDNAPKFTDGPYIVTV 168
Query: 58 PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
P G + Q+ +A D G +A + YSI G F +DP++GVI T +
Sbjct: 169 PEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNM 224
Query: 118 ---AGEQYSITVQATD----TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
A E YS+ +QA D GG S T V +++ N P F Q Y + V E A +
Sbjct: 225 DREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLT-DVNDNPPRFPQKHYQLYVPESAQV 283
Query: 171 NSTVATITVSRLASG 185
S V I + +G
Sbjct: 284 GSAVGKIKANDADTG 298
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 27/191 (14%)
Query: 7 ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLP-----MIPPI 59
N+DR+ + + A++ G + S TVN L D+NDN PR P + P
Sbjct: 222 HNMDREARE--HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPE 279
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDP--RSGVIETTGKL- 116
Q G A + KI+A D D G NA++TYSI + G+ D R G++ L
Sbjct: 280 SAQVGSA---VGKIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKPLN 336
Query: 117 ----------IAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
I G + + + G T++++ V G P+F +Y + V E
Sbjct: 337 YEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIV--GDVDEPPLFSMPSYVMEVYE 394
Query: 167 GASINSTVATI 177
A I + V T+
Sbjct: 395 NAKIGTVVGTV 405
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 38 SLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ VN+ DINDN P M ++ ++ K+ AT D+GVNA+I Y I +
Sbjct: 3274 TVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNE 3333
Query: 96 TGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTR 151
G KF++D +G V+ T + Y +T+QA D G S+ V +S++ N
Sbjct: 3334 QG--KFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISIL-DINDN 3390
Query: 152 SPVFQQNTYDVNVSEGASINSTVATI 177
SP F QN Y +NV+E + S + +
Sbjct: 3391 SPTFLQNLYRINVNEDIFVGSKILDV 3416
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 5 SKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQI-Q 62
++ LDR+ N + +V + S + V++ DINDN+P + +Q+
Sbjct: 1250 TERKLDRE--NQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPS 1307
Query: 63 AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQY 122
+ + I ++ A D+D G N ITYSI S G +KFRID + G I L + ++
Sbjct: 1308 SATVNQSIFQVHAIDSDSGENGRITYSIK--SGKGKNKFRIDSQRGHIHIAKPLDSDNEF 1365
Query: 123 SITVQATDTG-GKSSQT 138
I ++A D G K SQT
Sbjct: 1366 EIHIKAEDNGIPKKSQT 1382
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 18 KFRFQVIAREKQGTAASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQI 70
KF F I GT P+S + +++ DINDN+P + +I E +I
Sbjct: 3358 KFYFLTIQAIDGGTP---PLSNNAYVNISILDINDNSPTF-LQNLYRINVNEDIFVGSKI 3413
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQA 128
+ ++ATD D VN +TY+I N G +F IDP++G I + L Y++ +QA
Sbjct: 3414 LDVKATDEDSDVNGLVTYNIERGDNIG--QFSIDPKNGTISVSRPLDRETISHYTLEIQA 3471
Query: 129 TDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
D G V +++ + N +P+F + Y V + E + T +S
Sbjct: 3472 CDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKIS 3524
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)
Query: 20 RFQVIAREKQGTAASVPV--SLTVNLNDINDNAPRLPM------IPPIQIQAGEARRQIV 71
+++++A + G + + + +NDINDN P M +P + + I
Sbjct: 3150 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVP----EDAQLNTLIT 3205
Query: 72 KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQAT 129
K+ A D D GVN +I YS+ ++ F+I +G+I L +++TV+A
Sbjct: 3206 KVHAMDKDFGVNRQIKYSLMGENHD---YFKISKSTGIIRLHKSLDRETISLFNLTVKAE 3262
Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
D G +I V+V + N P F Y + E A+ + V + + + G
Sbjct: 3263 DCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIG 3319
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEAR 67
LDR+ + + + A++ S + V ++D+NDNAP + I +++ R
Sbjct: 935 LDREKQD--NYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPR 992
Query: 68 RQIVK-IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSI 124
++ IEA D D+G NAEI +S+ + FRID +G I T G L + +++
Sbjct: 993 GTVLAVIEAVDEDIGPNAEIQFSLKEETQDE-ELFRIDKHTGAIRTQGYLDYENKQVHNL 1051
Query: 125 TVQATDTGG---KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
V A D G S +IV + + N +P F Y+ V E + V +T
Sbjct: 1052 IVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVT 1108
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 39 LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
+ VN++D ND+ P +I ++ ++ ++ A D D G NAEI YSI N
Sbjct: 1595 IIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSII-TGNV 1653
Query: 97 GLHKFRIDPRSGVIETTGKLIAG--EQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRS 152
G F IDP G+I G L ++Y + V+A D G SSQ V + V N
Sbjct: 1654 G-SVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSEND-P 1711
Query: 153 PVFQQNTYDVNVSEGASINSTVATIT 178
P F N + + E I + V +T
Sbjct: 1712 PKFPTNNIAIEIFENLPIGTFVTQVT 1737
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%)
Query: 32 AASVPVS----LTVNLNDINDNAPRLPMIPPIQIQAGEA---RRQIVKIEATDNDLGVNA 84
A VP+S + + + + NDN P L P + EA +I+ ++A D D+
Sbjct: 1165 CAIVPLSNCVEVYIQVENENDNIP-LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQ 1223
Query: 85 EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYSITVQATDTGG--KSSQTI 139
ITY+I VS + F ID ++GVI+TT + + E ++ + V +D G SS +
Sbjct: 1224 TITYNI--VSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSR 1281
Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ VSV+ N SP F Q Y V V A++N ++ +
Sbjct: 1282 IVVSVL-DINDNSPEFDQRVYKVQVPSSATVNQSIFQV 1318
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
++ + + LD + + I + G+ + +++ D+NDN P + + I
Sbjct: 453 MLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKV-I 511
Query: 62 QAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-- 116
E A +VK+ A D D G N+ I+YSI +N F ID SG+++TT L
Sbjct: 512 SINENNLAGSFVVKLTAKDRDSGENSYISYSI---ANLNAVPFEIDHFSGIVKTTSLLDF 568
Query: 117 -IAGEQYSITVQATDTG-GKSSQTIVEVS-VVPGPNTRSPVFQQ-NTY 160
Y + ++A+D G QT +++S VV N P F++ N Y
Sbjct: 569 ETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCY 616
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 61 IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
+Q GE + IEA D DLG N ++ ++I + FRIDP G ++ G L
Sbjct: 782 VQLGET---VAWIEAKDRDLGYNGKLVFAISDGDYDSV--FRIDPDRGELQIIGYLDRER 836
Query: 121 Q--YSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVAT 176
Q Y + + D G KS+ ++ ++++ + R PV Q+ ++E A I + V
Sbjct: 837 QNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNR-PVIQKTLATFRLTESARIGTVVHC 895
Query: 177 ITVSRLASG 185
+ + SG
Sbjct: 896 LHATDADSG 904
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
L D P +F ++ + + + + ++P+ T + +++ +P PI +
Sbjct: 368 LAEDLGTPRRFAYKSVPIQIKPESKNIPI-FTQEIYEVS-----IPETAPINMP------ 415
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
+++++ +D DLG NA + I V +FRI+P SG++ T +L A ++ Y++TV
Sbjct: 416 -VIRLKVSDPDLGKNALVYLEI--VGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTV 472
Query: 127 QATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLA 183
A D G Q+ +V + V N P+F+ ++++E S V +T
Sbjct: 473 SAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRD 532
Query: 184 SG 185
SG
Sbjct: 533 SG 534
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 43 LNDINDNAPRLPMIPP---IQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGL 98
+ D+NDNAP + P ++ R Q V + +A D D+ + Y I V L
Sbjct: 2455 VKDLNDNAP--CFVEPSYFTKVSVAAVRGQFVALPKAYDKDISDTDSLEYKI--VYGNEL 2510
Query: 99 HKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQ 157
+ ID +GVI L ++ S + + + G ++ +++S++P N SP+F Q
Sbjct: 2511 QTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLLP-ENVYSPLFDQ 2569
Query: 158 NTYDVNVSEGASINSTVATITVS 180
+TY+ V E + T+ S
Sbjct: 2570 STYEAQVPENLLHGHNIITVKAS 2592
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 9 LDRDPPNPGKFRFQV--IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
LDR+ N V + + T+ +P+++ D+NDN P + A
Sbjct: 832 LDRERQNEYVLNITVYDLGNPTKSTSKMLPITIL----DVNDNRPVIQKTLATFRLTESA 887
Query: 67 RRQIV--KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--Y 122
R V + ATD D G+NA++TY++ + F ++ +G + L +Q Y
Sbjct: 888 RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCLRLNKPLDREKQDNY 943
Query: 123 SITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++ + A D G SS+ +V V +V N +PVF Y V E + +A I
Sbjct: 944 ALHITAKDGGSPVLSSEALVYV-LVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVI 999
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSIT 125
+ I+K+ A D DLG+N EI YS+ S F I P +G I +L E + +T
Sbjct: 197 QSILKVTADDADLGINGEIYYSLLMDS----EYFAIHPTTGEITLLQQLQYAENSHFELT 252
Query: 126 VQATDTGG-------KSSQTIVEVSV 144
V A D G ++S+T V +SV
Sbjct: 253 VVAYDRGSWVNHQNHQASKTKVSISV 278
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 22 QVIAREKQ--------GTAASVPV-----SLTVNLNDINDNAPRLP--MIPPIQIQAGEA 66
Q + RE+Q ++VPV + +++ D NDN P+ + E
Sbjct: 2832 QTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEK 2891
Query: 67 RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSI 124
+VK+ ATD D G N +I Y + + + F ID SG I L +Y+
Sbjct: 2892 VISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNF 2951
Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGA 168
V A D G V V++ + N +PVF+ ++V E A
Sbjct: 2952 KVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENA 2996
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Query: 38 SLTVNLNDINDNAP---RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
S+ +++ D+NDN P +P + I + I++++A D D N E+ Y +
Sbjct: 2122 SIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKK-G 2179
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK--SSQTIVEVSVVPGPNT 150
N L F++D +SG + + + + G Y +TV A D SS+ ++V V+ +
Sbjct: 2180 NGEL--FKLDRKSGEL-SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVI---DR 2233
Query: 151 RSPVFQQNTYDVNVSEGASINSTVA 175
PVF++ Y V+V E + S ++
Sbjct: 2234 SMPVFEKQFYTVSVKEDVEMYSALS 2258
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 37 VSLTVNLNDINDNAPRLPM-IPPIQI-QAGEARRQIVKIEATDNDLGVNAEITYSIYHV- 93
V L+V++ D+ND P + I + I + QI+KI ATDND G NA+++Y I +
Sbjct: 2322 VVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESIN 2381
Query: 94 --SNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQATDTGGKS-------------- 135
+N+ L F ID G ++T + + I V D G S
Sbjct: 2382 GQNNSEL--FYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITGRIL 2439
Query: 136 ----SQTIVEVSVVP--GPNTRSPVFQQNTYDVNVSEGA 168
S ++ S++P N +P F + +Y VS A
Sbjct: 2440 CRFISYKLIYDSIIPVKDLNDNAPCFVEPSYFTKVSVAA 2478
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI--ETTGKLIAGEQYSIT 125
I+ ++A+D D G A + Y I VS F ID +GVI + T ++Y +
Sbjct: 2584 HNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQTTGVITSKVTFDREKKDEYVVL 2641
Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++ +D GGK ++V VV N P F Y + VS N T+ T+
Sbjct: 2642 LKVSDGGGKFGFASLKVIVVD-VNDNVPYFLLKEYKMVVSTTVEANQTILTV 2692
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 101 FRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQN 158
FRI+P +GVI G + + + +++TV+ T+ +SS + + ++ N P F QN
Sbjct: 1757 FRINPSTGVIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIHILDA-NDNIPYFVQN 1815
Query: 159 TYDVNVSEGASINSTVATI 177
Y + E A+I S V +
Sbjct: 1816 EYVGALPESAAIGSYVLKV 1834
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--RLPMIPPIQIQAGEA 66
LDR+ + ++ F+VIA + V +T+ + D NDNAP +LP+ +
Sbjct: 2941 LDREVQS--EYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALP 2998
Query: 67 RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
++ + D D+ E+ + I VS +F+I +SG + K + EQ Y+
Sbjct: 2999 GTVLINLLLIDPDIE-KQEMDFFI--VSGDKQAQFQI-GKSGEL-FIAKPLDREQLMFYN 3053
Query: 124 ITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+++ ATD G +++ VE+ V N +P + Y ++ +E SI +T+ +
Sbjct: 3054 LSIIATD-GKFTAKANVEID-VKDINDNTPYCLKPRYHISTNESISIGTTLVEV 3105
Score = 30.0 bits (66), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 122 YSITVQATDTGGKSSQTIVEVSVVPGPNTRS-PVFQQNTYDVNVSEGASINSTVATITVS 180
Y++T+ A D G V + P +++ P+F Q Y+V++ E A IN V + VS
Sbjct: 363 YNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 422
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 28/198 (14%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
+V + +LDR+ + FR V+A + S +L VN+ D ND++P Q
Sbjct: 415 VVTTSASLDRELMDVHYFR--VVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAE---QF 469
Query: 62 QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSN-TGLHK------FRIDPRSGV 109
+A ++ + ATD D+G NAEI Y I V++ GL + FRID RSGV
Sbjct: 470 EASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGV 529
Query: 110 IETTGKLI--AGEQYSITVQATDTGGKSSQ-----TIVEVSVVPGPNTRSPVFQQNTYDV 162
I T L + Y + V A D S+ V+V V+ N P F + TY V
Sbjct: 530 ISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVL-DDNDNYPQFSERTYTV 588
Query: 163 NVSE---GASINSTVATI 177
V E G + ++TVA I
Sbjct: 589 QVPEDQWGGTEDNTVAHI 606
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEAT 76
+R + A++ + S L VN+ D NDNAPR ++ I++++A
Sbjct: 655 YRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAY 714
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG-- 132
D+D G NAEITYSI + +DPR+G ++T L EQ ++ V A D G
Sbjct: 715 DSDEGANAEITYSISERDDN--FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVP 772
Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
SS ++ V V N P F Y+ NV E + V T+T +
Sbjct: 773 PKSASSSVVITVQDV---NDNDPAFNPKYYEANVGEDQPPGTPVTTVTAT 819
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKIEA 75
+F V A + G + + V +N+ D N+ AP P + ++ + A
Sbjct: 864 RFLLTVAATDSGGRSDTATVH--INITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921
Query: 76 TDNDLGVNAEITYSIYHVSNTGL---HKFRIDPRSGVIETTGKLI--AGEQYSITVQATD 130
TD+D+GVNA+ITYS+ S GL F I+P++G I T L Y +TV A D
Sbjct: 922 TDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKD 981
Query: 131 TGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
G S +V + V N +P F+ Y ++ E A + ++V + S
Sbjct: 982 GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS 1032
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR 68
LDR+ G+F FQV+A++ S S+ + + D+NDN P P +A
Sbjct: 752 LDRE--EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND---PAFNPKYYEANVGED 806
Query: 69 Q-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG----VIETTGKLIAG 119
Q + + ATD D ++ + Y I + G +F I ++G I +
Sbjct: 807 QPPGTPVTTVTATDPD--EDSRLHYEITTGNTRG--RFAITSQNGRGLITIAQSLDYKQE 862
Query: 120 EQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITV 179
+++ +TV ATD+GG+S V +++ N +P+F+ Y +V E A + +TV ++
Sbjct: 863 KRFLLTVAATDSGGRSDTATVHINITDA-NNFAPIFENAPYSASVFEDAPVGTTVLVVSA 921
Query: 180 S 180
+
Sbjct: 922 T 922
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
+V+ LDR+ + V A++ + S + + + D+NDNAP P+
Sbjct: 959 IVTNAPLDRE--TTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASI 1016
Query: 61 IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLH--KFRIDPRSGVIETTGKLI- 117
++ ++++ A+D D+G+N I Y + S+ + F IDP SG I T L
Sbjct: 1017 LEDALVGTSVIQVAASDPDVGLNGRIKYLL---SDRDIEDGSFVIDPTSGTIRTNKGLDR 1073
Query: 118 -AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
+ + +T A D G + VEV + + N P F + + V E + + S V
Sbjct: 1074 ESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVG 1133
Query: 176 TI 177
I
Sbjct: 1134 EI 1135
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 101 FRIDPRSGVIETTGKL---IAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVF 155
F++D R+GV+ T+ L + Y V ATD +S T ++V+V+ N SP F
Sbjct: 407 FKVDSRTGVVTTSASLDRELMDVHY-FRVVATDDSFPPRSGTTTLQVNVLDC-NDHSPTF 464
Query: 156 QQNTYDVNVSEGASINSTVATI 177
+ ++ ++ EGA++ STV T+
Sbjct: 465 EAEQFEASIREGATVGSTVITL 486
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIARE---KQGTAASVPVSLTVNLNDINDNAPRLP---- 54
++ ++ +LDR+ + + V A + Q + S+ V + D NDN P+
Sbjct: 529 VISTRSSLDRETSD--SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTY 586
Query: 55 --MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
+P Q G + I ATD D G NA I Y+I + +F ID SG +
Sbjct: 587 TVQVPEDQ-WGGTEDNTVAHIRATDADQGNNAAIRYAI--IGGNTQSQFSIDSMSGDVSL 643
Query: 113 TGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
L + Y + ++A D G S ++ V V N +P F + + +V E
Sbjct: 644 VKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLE 700
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 18/97 (18%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--------- 53
+ + + LDR+ + F IA +K S V + + L D+ND+ P
Sbjct: 1065 IRTNKGLDRE--SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYV 1122
Query: 54 PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
P P+ GE I A D D GVNA + YSI
Sbjct: 1123 PENSPVGSVVGE-------IHAHDPDEGVNAVVHYSI 1152
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
V + E LDR+ + FR V A++ S +LT+ + D ND+ P Q +
Sbjct: 241 VTTAEELDRETKSTHVFR--VTAQDHGMPRRSALATLTILVTDTNDHDPVFE-----QQE 293
Query: 63 AGEARRQ-------IVKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETTG 114
E+ R+ ++ + ATD D NA I Y + S + F IDPRSGVI T G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 353
Query: 115 KLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
+ E Y +TV+A+D G G S T V N +P F + Y V V E +
Sbjct: 354 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 170 INSTVATITVS 180
+ V +T S
Sbjct: 414 PGAPVLRVTAS 424
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARR 68
+ + AR+ S L + +ND+NDNAP+ +PP
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT-------- 832
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL----IAGEQYSI 124
+++I ATD D G+N + Y+ + + G F ++ SG++ T +L +A QY +
Sbjct: 833 SVLQISATDRDSGLNGRVFYT-FQGGDDGDGDFIVESTSGIVRTLRRLDRENVA--QYVL 889
Query: 125 TVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
A D G ++T +EV+V V N PVF+Q+ +DV V E + I VA +T +
Sbjct: 890 RAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTAT 946
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 29/193 (15%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
++ V+ E LDR+ + + F V AR+ A + S++V + D+NDN P P
Sbjct: 561 WISVAAE-LDREEVD--FYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQ-PEYT 616
Query: 61 IQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
++ E +V + A D D ++ ITY I S ++F I +SG G L+
Sbjct: 617 VRLNEDAAVGTSVVTVSAVDRD--AHSVITYQI--TSGNTRNRFSITSQSG-----GGLV 667
Query: 118 A---------GEQYSITVQATD-TGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEG 167
+ QY + V A+D T ++Q +V V+ NT PVFQ + Y VNV+E
Sbjct: 668 SLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDA---NTHRPVFQSSHYTVNVNED 724
Query: 168 ASINSTVATITVS 180
+TV I+ +
Sbjct: 725 RPAGTTVVLISAT 737
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
+V I ATD D G NA ITY + + +FRID +G + T +L +Q Y++ +
Sbjct: 731 VVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAIT 786
Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
A D G KS T +E+ +V N +P F +++Y +V E ++V I+ + SG
Sbjct: 787 ARDNGIPQKSDTTYLEI-LVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSG 845
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 34 SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSI 90
S ++ +++ D NDNAP+ + +Q E ++++ A+D D G NA + YSI
Sbjct: 380 STTAAVFLSVEDDNDNAPQFSEKRYV-VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSI 438
Query: 91 YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQT----IVEVSV 144
+S +F +D ++G ++ L ++Y++ V+A D GG+ + +V V V
Sbjct: 439 --MSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQD-GGRPPLSNVSGLVTVQV 495
Query: 145 VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ N +P+F + V E + V +
Sbjct: 496 L-DINDNAPIFVSTPFQATVLESVPLGYLVLHV 527
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMI----- 56
+V + LDR+ N ++ + A +K A P+ +TV + D+NDN P
Sbjct: 872 IVRTLRRLDRE--NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVF 929
Query: 57 ----PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
PI + + ++ ATD D G NA+I Y I V F++D SG +
Sbjct: 930 VEENSPIGL-------AVARVTATDPDEGTNAQIMYQI--VEGNIPEVFQLDIFSGELTA 980
Query: 113 TGKLIAGE--QYSITVQAT 129
L + +Y + +QAT
Sbjct: 981 LVDLDYEDRPEYVLVIQAT 999
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
+ + AR+ + + V +ND+NDNAP+ + + +A +++I AT
Sbjct: 927 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 986
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
D D N + Y+ + G F I+P SG++ T +L A Y +T A D G
Sbjct: 987 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYAVDRGVP 1045
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+T V + V V N +PVF ++V V E + + S VA IT
Sbjct: 1046 PLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1090
Score = 53.5 bits (127), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 22/194 (11%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+ + LDR+ + +V A++ S + V + D ND++P Q
Sbjct: 384 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFE-----QA 436
Query: 62 QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
Q E R+ I+++ ATD D NA + Y F IDPRSG+I
Sbjct: 437 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIS 496
Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
T+G++ E Y + V+A+D G G S T+ V N +P F + Y V E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 167 GASINSTVATITVS 180
++ V +T +
Sbjct: 557 DVRPHTVVLRVTAT 570
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 41 VNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
+N+ D N + P + E R IV I A+D+D+G NA ITY +
Sbjct: 846 INITDANTHRPVFQS-AHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLL----EDN 900
Query: 98 LHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG--GKSSQTIVEVSVVPGPNTRSP 153
L +FRID SG I L +Q Y++ + A D G K+ T VEV +V N +P
Sbjct: 901 LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEV-MVNDVNDNAP 959
Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
F + Y VSE A ++V I+ +
Sbjct: 960 QFVASHYTGLVSEDAPPFTSVLQISAT 986
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
++++ A D D G + YS+ + N+ L F IDP+SG+I T L + E++ + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403
Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
A D G S+ T+V V+V N SPVF+Q Y NV EG I AT
Sbjct: 404 TAQDHGSPRLSATTMVAVTVA-DRNDHSPVFEQAQYRETLRENVEEGYPILQLRAT 458
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
+ F V AR+ S S+TV + D+NDN P M ++ E +V + A
Sbjct: 722 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 780
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
D D N+ I+Y I ++F I + GV T L E+Y V
Sbjct: 781 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 836
Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
V +++ NT PVFQ Y V+V+E + ST+ I+ S
Sbjct: 837 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSVNEDRPMGSTIVVISAS 883
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 36 PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
PVS+ V + D+NDNAP P +++ E + +I A D D G NA I Y I
Sbjct: 1050 PVSIQVMVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDEGPNAHIMYQI-- 1106
Query: 93 VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
V F++D SG + L A ++Y I VQAT + S+ V V +V N
Sbjct: 1107 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1164
Query: 151 RSPVFQQ-----NTYDVNVSE 166
SPV N Y N S+
Sbjct: 1165 NSPVLNNFQILFNNYVSNRSD 1185
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 32 AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
+A+V V +TV D NDNAP+ + + R ++++ ATD D N + Y+
Sbjct: 526 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYN 583
Query: 90 IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
I +S F ID +G I+ L A +Y++ ++A D G S+ T + V
Sbjct: 584 I--ISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 641
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N P+F + V+V E A + +V I
Sbjct: 642 VDINDHIPIFVSTPFQVSVLENAPLGHSVIHI 673
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEA 66
LDR+ GK+ V+A ++ A + L +++ND+ND+ P + +
Sbjct: 452 LDRE--EIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPT 509
Query: 67 RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSI 124
+ I ATD D GVNA++ Y I +S L F +DP +G+I TTG L + +
Sbjct: 510 GSFVASITATDEDTGVNAQVHYDI--LSGNELKWFSMDPLTGLIVTTGPLDREIRDTVEL 567
Query: 125 TVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
++ A D G K + T ++V ++ N +P F Q +V + E A + VA +T +
Sbjct: 568 SISARDGGPNPKFAYTQLKV-IILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDH 626
Query: 183 ASG 185
G
Sbjct: 627 DQG 629
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP-MIPPIQI 61
++ + LDR+ + + R +V + Q T A T+ ++D NDN P + I
Sbjct: 1877 LILNDTLDRETKSKYELRIRV-SDGVQYTEAYA----TIQVSDTNDNPPLFEDTVYSFDI 1931
Query: 62 QAGEAR-RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
R Q+ +I A D DLG NA+++Y + VS+ F ++P++G++ T +L E
Sbjct: 1932 PENAQRGYQVGQIVARDADLGQNAQLSYGV--VSDWANDVFSLNPQTGMLTLTARLDYEE 1989
Query: 121 --QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
Y + VQA D G S T + V V N +P+F +Y V E I + V T+
Sbjct: 1990 VQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTV 2049
Query: 178 TVSRLASG 185
+ + SG
Sbjct: 2050 SAKDIDSG 2057
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI- 61
+ ++ LDR+ G + F V A ++ + S+ ++L D NDN P+ + + +
Sbjct: 2865 IYTRMRLDRE--EIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSLNVT 2922
Query: 62 QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
+ E ++++ ++D DLG NA +YS N G KFRI+P+SG I G L +Q
Sbjct: 2923 ENAEIGSFVIRVTSSDLDLGANANASYSF--SENPG-EKFRIEPQSGNITVAGHLDREQQ 2979
Query: 122 --YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
Y + V A+D G ++T + ++ + N +P F+ + Y + E
Sbjct: 2980 DEYILKVVASD-GAWRAETPITIT-IQDQNDNAPEFEHSFYSFSFPE 3024
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 37 VSLTVNLNDINDNAPRLP-----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY 91
V+LT++++D+NDN P+ + P +I GE + A D D G NA + Y+I
Sbjct: 2580 VNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEF---VFGARALDLDDGENAVVHYTI- 2635
Query: 92 HVSNTGLHKFRIDPRSGVIETTGKLIAGEQ------YSITVQATDTGGKSSQTIVEVSVV 145
S H F I+ ++GV+ T +L + Y+I + A D G +S + E++V+
Sbjct: 2636 --SGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVI 2693
Query: 146 PGPNTRSPVF 155
P P F
Sbjct: 2694 LRPPELFPTF 2703
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQG-TAASVPVSLTVNLNDINDNAPRL-------- 53
+ ++ LDR+ ++ VIAR++ T S ++ +N+ D+NDN P+
Sbjct: 659 LTTRRPLDRE--KMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYS 716
Query: 54 --PMIPPIQIQAG-EARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
I+++ E R ++ + A+D D G NA I Y + + G F++D RSG I
Sbjct: 717 LADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRL---ESGGEGLFQLDARSGAI 773
Query: 111 ETTGKLIAG----EQYSITVQATDTGGKSSQ--TIVEV 142
G A Y + V A D G + SQ IVE+
Sbjct: 774 SLRGDAPASMHWKPHYKLLVSARDAGQRRSQQDAIVEI 811
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 32/136 (23%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP--------------RL 53
NLDR+ + G ++ + AR+ + + V + D+NDN P L
Sbjct: 227 NLDRE--SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETAL 284
Query: 54 PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT 113
P P +V + A+DNDLG N++ITY + H+F ++P +GVI TT
Sbjct: 285 PGTP------------VVTVMASDNDLGDNSKITYYLAETE----HQFTVNPETGVISTT 328
Query: 114 GKLIAGEQYSITVQAT 129
++ +Q ++ A+
Sbjct: 329 ERVNCPQQTNVKSSAS 344
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Query: 11 RDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQI 70
R P + R + +A +KQ +S V +T+ + D+ND P I A +
Sbjct: 2126 RSPRKYQQTRQEFLAHQKQQRLSST-VKVTILIKDVNDEVPVFISANETAIMENVAINTV 2184
Query: 71 V-KIEATDNDLGVNAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AGEQY 122
V ++A DND G N I Y + + + + F ++P G + L Y
Sbjct: 2185 VIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSY 2244
Query: 123 SITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSR 181
+ + A D G T ++ + + N SPVF Y +V+E ASI + V ++ +
Sbjct: 2245 LLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATD 2304
Query: 182 LASGC 186
+ G
Sbjct: 2305 VDEGA 2309
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 45 DINDNAPRLPMI----PPIQIQAGEARRQIVKI-EATDNDLGVNAEITYSIYHVSNTGLH 99
D+NDNAP + P I + A Q + + D D GVN+ I+YS+ +N
Sbjct: 934 DLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL---TNNPNQ 990
Query: 100 KFRIDPRSGVIETTGKLIA--GEQYSITVQATDTG-GKSSQTIVEVSVVPGPNTRSPVFQ 156
+FRI P +GV+ + A G + + ATD G S + ++ N +PVF
Sbjct: 991 QFRIGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFD 1050
Query: 157 QNTYDVNVSEGASINSTVATITVSRLASG 185
+Y+ ++ E +N+ + + + G
Sbjct: 1051 HTSYETSLPETTKVNTRFFALAATDIDLG 1079
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 41 VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDN-DLGVNAEITYSIYHVSNT 96
+N+ D ++N P+ + P+ A +R IV++ A D DLG N E+ YS+ + +
Sbjct: 3112 INIVDAHNNPPKFEQAEYLAPLPQDAVRGQR-IVRVHANDKQDLGTN-EMDYSLMTFNLS 3169
Query: 97 GLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRS 152
+ F + G I ++ +Y + V+ATD G +S +T V V VV G N +
Sbjct: 3170 SI--FSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRV-VIVVTGENMDT 3226
Query: 153 PVFQQNTYDVNVSEGASINSTVATI 177
P F N+Y V V E + ST+ T+
Sbjct: 3227 PRFSVNSYQVIVPENEPVGSTILTV 3251
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------ 54
YL V + LDR+ + + V R+ + S V + +++ D NDNAP+
Sbjct: 1104 YLFV-RAPLDREERD--YYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTF 1160
Query: 55 MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETT- 113
IP + A + K+ A D D+G NAE+++++ ++ F ID R+G I+T
Sbjct: 1161 SIP----ENAPADTFVGKLTAVDRDIGRNAELSFTL----SSQTQDFTIDTRNGFIKTLR 1212
Query: 114 --------------------GKL---IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPN 149
G L +AG + +D G Q V+V V V N
Sbjct: 1213 PFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVN 1272
Query: 150 TRSPVFQQNTYDVNVSEGAS 169
+P F + Y V +SEGAS
Sbjct: 1273 DNAPEFLRAPYHVTISEGAS 1292
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 34 SVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKI---EATDNDLGVNAEITYSI 90
+ P+ + + + D+NDN+P P P I I E+ ++ ATD D+G N +T
Sbjct: 137 TYPIEVRIKVLDVNDNSPEFPE-PSIAISFSESATSGTRLLLDAATDADVGENG-VTDQY 194
Query: 91 YHVSNTGLHKFRI--------DPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIV 140
V+ +KFR+ D +ETTG L + Y + + A D G +
Sbjct: 195 EIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYL 254
Query: 141 EVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
+V+V + N P+F + Y+V+++E A + V T+ S
Sbjct: 255 QVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMAS 295
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 41 VNLNDINDNAPRLPMIPPIQIQAGEARR------QIVKIEATDNDLGVNAEITYSIYHVS 94
V + DINDN P + +Q R ++ ATD D G+NA++ +++
Sbjct: 2479 VEVQDINDNDP----VFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLL--- 2531
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---TGGKSSQTIVEVSVVPGPN 149
+H+F ID +G I T L E Y +T+ A D T ++S + +S V N
Sbjct: 2532 GEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTIS-VSDVN 2590
Query: 150 TRSPVFQQNTYDVNVSE 166
P F TY+V V E
Sbjct: 2591 DNIPKFDSTTYNVAVPE 2607
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 39 LTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVK-IEATDNDLGVNAEITYSIYHVSNT 96
+T+N+ D NDNAP + +I ++ E+ Q++ ++A+D D G N + IY + N
Sbjct: 2796 ITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNV---IYRLQND 2852
Query: 97 GLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
F I SG I T +L E Y+ V+A D G V + + N P
Sbjct: 2853 FDGTFEI-TESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPP 2911
Query: 154 VFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
F + + +NV+E A I S V +T S L G
Sbjct: 2912 KFTR-LFSLNVTENAEIGSFVIRVTSSDLDLGA 2943
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 20/160 (12%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR-----QIVKI 73
+ + AR++ S L + + D NDN+P + P Q A A ++++
Sbjct: 2244 YLLNITARDRGEPPQSTESQLLIRILDENDNSP---VFDPKQYSASVAENASIGAMVLQV 2300
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDT 131
ATD D G N I YSI V H F I +GV+ L +YS+TV+A D
Sbjct: 2301 SATDVDEGANGRIRYSI--VLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDC 2358
Query: 132 -----GGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
G +++ + + + N P F + Y V E
Sbjct: 2359 ALENPAGDTAELTINILDI---NDNRPTFLDSPYLARVME 2395
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 83 NAEITYSIYHVSNTGLHK-----FRIDPRSGVIETTGKLI--AG-EQYSITVQATDTGG- 133
+AEI Y + +V+ TG F ID + G++ T +L AG E+Y + V A GG
Sbjct: 1742 SAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQ 1801
Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++S+T V V+V+ N P F + NVSE I T++T+
Sbjct: 1802 PRTSRTKVRVTVL-DKNDSPPQFLDTPFVYNVSEDLQIGHTISTL 1845
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 19 FRFQVIAREKQGTAA---SVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQI 70
FR V+A ++ + S +TV + DINDNAP ++PP + + +
Sbjct: 1564 FRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGSSTAV 1623
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHK-FRIDPRSGVIETT-GKLIAGE-QYSITVQ 127
+++ A D D N +TY I +G + F++ +G+I T G E +Y +T++
Sbjct: 1624 MQVHAKDADSSSNGLVTYEIV----SGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLK 1679
Query: 128 ATDTGGKSSQTIVEVSVV------PGPNTRSPVFQQNT-YDVNVSEGASINSTVATITVS 180
+TD +S + EV + G + P F+Q + +V E I +++ T+T +
Sbjct: 1680 STDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVT-A 1738
Query: 181 RLASG 185
LAS
Sbjct: 1739 HLASA 1743
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 38 SLTVNLNDINDNAPRLPMIPP--IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
S+T+ + D NDNAP ++ ++++ A+D D GVN+++ +SI +
Sbjct: 1369 SITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSI--SAG 1426
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
F ID +G + L + Y++ + A+D G S T V +V V N
Sbjct: 1427 NRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNP 1486
Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
P+F + EG + + + T+T SG
Sbjct: 1487 PIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSG 1519
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
+ + ATD DLG N I+Y I + F + P G + L E+ Y++TV
Sbjct: 1067 RFFALAATDIDLGDNGRISYEI--IEGNTERMFGVFP-DGYLFVRAPLDREERDYYALTV 1123
Query: 127 QATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
D G S ++V V + V N +P F +T+ ++ E A ++ V +T
Sbjct: 1124 SCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLT 1176
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAG-EARRQIVKIEAT 76
+ + A + + S V V + D NDN P P + QI+ G + IV + A
Sbjct: 1455 YTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTAD 1514
Query: 77 DNDLGVNAEITYSIYHVS---NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
D D G+N +++Y+I G H F I+ +GVI T ++ + + + +TV ATD
Sbjct: 1515 DPDSGLNGKVSYAISKQEPQLPQGRH-FGINTETGVIHTLREIDRESIDTFRLTVVATDR 1573
Query: 132 GGK-----SSQTIVEVSVVPGPNTRSPVF 155
S++ +V V +V N +PVF
Sbjct: 1574 AQPSERQLSTEKLVTV-IVEDINDNAPVF 1601
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEA 75
+ Q+ A+ + S +L V++ +N+ P+ + P E ++ ++A
Sbjct: 3406 YTLQIKAKNPDSSMESY-ANLYVHVLGVNEFYPQF-LQPVFHFDVSETSAVGTRVGAVQA 3463
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI--TVQATDTGG 133
TD D G + + Y + SN FRID +G+I L Q + TV A + G
Sbjct: 3464 TDKDSGEDGRVYYLLVGSSND--KGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGS 3521
Query: 134 ----KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ + V +S+ G + P F ++ Y +SE A + + V T+
Sbjct: 3522 IRGNDTDEAQVIISIQDGND--PPEFIKHYYTSTISEAAPVGTKVTTV 3567
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSG--VIETTGKLIAGEQYSITVQ 127
I+ + ATD+D G N + YSI F +D R+G VI+ ++Y + +
Sbjct: 3248 ILTVGATDDDTGPNGMLRYSI--SGGNERQDFSVDERTGGIVIQQQLDYDLIQEYHLNIT 3305
Query: 128 ATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTV 174
D G ++ ++++ N PVF Y + E + + V
Sbjct: 3306 VQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGTFV 3353
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 39 LTVNLNDINDNAP---------RLPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYS 89
LT+ L D+NDN P +P P+ + + A D D NA I Y+
Sbjct: 3320 LTIILTDVNDNPPVFNHKEYHCYIPENKPVGTF-------VFQAHAADKDSPKNAIIHYA 3372
Query: 90 IYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSV-VP 146
+ S H F ++ +G I + E+ Y++ ++A + S ++ + V V
Sbjct: 3373 -FLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPD-SSMESYANLYVHVL 3430
Query: 147 GPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
G N P F Q + +VSE +++ + V + + SG
Sbjct: 3431 GVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSG 3469
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
+ + AR+ + + V +ND+NDNAP+ + + +A +++I AT
Sbjct: 918 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
D D N + Y+ + G F I+P SG++ T +L A Y +T A D G
Sbjct: 978 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+T V + V V N +PVF ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081
Score = 56.6 bits (135), Expect = 9e-08, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+ + LDR+ + +V A++ S + V + D ND+AP Q
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427
Query: 62 QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
Q E R+ I+++ ATD D NA + Y V F IDPRSG+I
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIS 487
Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
T+G++ E Y + V+A+D G G S T+ V N +P F + Y V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 167 GASINSTVATITVS 180
++ V +T +
Sbjct: 548 DVRPHTVVLRVTAT 561
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
+V I A+D+D+G NA ITY + L +FRID SG I L +Q Y++ +
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923
Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
A D G K+ T VEV +V N +P F + Y VSE A ++V I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEA 75
+ F V AR+ S S+TV + D+NDN P M ++ E +V + A
Sbjct: 713 YFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAAVGTSVVSVTA 771
Query: 76 TDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQYSITVQATDTG 132
D D N+ I+Y I ++F I + GV T L E+Y V
Sbjct: 772 VDRD--ANSAISYQI--TGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDR 827
Query: 133 GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
V +++ NT PVFQ Y V+++E + STV I+ S
Sbjct: 828 ALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 50 APRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNT-GLHKFRI 103
A R P P Q A ++++ A D D G + YS+ + N+ L F I
Sbjct: 310 ANRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSI 369
Query: 104 DPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNT 159
DP+SG+I T L + E++ + V A D G S+ T+V V+V N +PVF+Q
Sbjct: 370 DPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVA-DRNDHAPVFEQAQ 428
Query: 160 Y----DVNVSEGASINSTVAT 176
Y NV EG I AT
Sbjct: 429 YRETLRENVEEGYPILQLRAT 449
Score = 44.3 bits (103), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 32 AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
+A+V V +TV D NDNAP+ + + R ++++ ATD D N + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574
Query: 90 IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
I +S F ID +G I+ L A +Y++ ++A D G S+ T + V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N +P+F + V+V E A + +V I
Sbjct: 633 VDINDHAPIFVSTPFQVSVLENAPLGHSVIHI 664
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 36 PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
PVS+ V + D+NDNAP P +++ E + +I A D D G NA I Y I
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097
Query: 93 VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
V F++D SG + L A ++Y I VQAT + S+ V V +V N
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155
Query: 151 RSPVFQQ-----NTYDVNVSE 166
SPV N Y N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 61.6 bits (148), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
+ + AR+ + + V +ND+NDNAP+ + + +A +++I AT
Sbjct: 918 YTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK 134
D D N + Y+ + G F I+P SG++ T +L A Y +T A D G
Sbjct: 978 DRDAHANGRVQYT-FQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVP 1036
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+T V + V V N +PVF ++V V E + + S VA IT
Sbjct: 1037 PLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQIT 1081
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 22/194 (11%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+ + LDR+ + +V A++ S + V + D ND+AP Q
Sbjct: 375 LIRTAAALDRESME--RHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFE-----QA 427
Query: 62 QAGEARRQ-------IVKIEATDNDLGVNAEITYSIY---HVSNTGLHKFRIDPRSGVIE 111
Q E R+ I+++ ATD D NA + Y F IDPRSG+I
Sbjct: 428 QYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLIS 487
Query: 112 TTGKLIAG--EQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
T+G++ E Y + V+A+D G G S T+ V N +P F + Y V E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 167 GASINSTVATITVS 180
++ V +T +
Sbjct: 548 DVRPHTVVLRVTAT 561
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQ 127
+V I A+D+D+G NA ITY + L +FRID SG I L +Q Y++ +
Sbjct: 868 VVVISASDDDVGENARITYLL----EDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAIT 923
Query: 128 ATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
A D G K+ T VEV +V N +P F + Y VSE A ++V I+ +
Sbjct: 924 ARDNGIPQKADTTYVEV-MVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISAT 977
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 31 TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA-----GEARRQIVKIEATDNDLGVNAE 85
T A L+ N A R P P Q A ++++ A D D G
Sbjct: 291 TGAEAKRILSTNQARSRRAANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGR 350
Query: 86 ITYSIYHVSNT-GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIV 140
+ YS+ + N+ L F IDP+SG+I T L + E++ + V A D G S+ T+V
Sbjct: 351 LVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMV 410
Query: 141 EVSVVPGPNTRSPVFQQNTY----DVNVSEGASINSTVAT 176
V+V N +PVF+Q Y NV EG I AT
Sbjct: 411 AVTVA-DRNDHAPVFEQAQYRETLRENVEEGYPILQLRAT 449
Score = 47.0 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
LDR+ + F V AR+ S S+TV + D+NDN P M ++ E
Sbjct: 705 LDRESVE--HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTM-KEYHLRLNEDAA 761
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL---IAGEQY 122
+V + A D D N+ I+Y I ++F I + G+ T L E+Y
Sbjct: 762 VGTSVVSVTAVDRD--ANSAISYQI--TGGNTRNRFAISTQGGMGLVTLALPLDYKQERY 817
Query: 123 SITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
V V +++ NT PVFQ Y V+++E + STV I+ S
Sbjct: 818 FKLVLTASDRALHDHCYVHINITDA-NTHRPVFQSAHYSVSMNEDRPVGSTVVVISAS 874
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 32 AASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQ--IVKIEATDNDLGVNAEITYS 89
+A+V V +TV D NDNAP+ + + R ++++ ATD D N + Y+
Sbjct: 517 SATVRVHITVL--DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYN 574
Query: 90 IYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGK--SSQTIVEVSVV 145
I +S F ID +G I+ L A +Y++ ++A D G S+ T + V
Sbjct: 575 I--ISGNSRGHFAIDSLTGEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQV 632
Query: 146 PGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
N SP+F + V+V E A + +V I
Sbjct: 633 VDINDHSPIFVSTPFQVSVLENAPLGHSVIHI 664
Score = 43.9 bits (102), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 36 PVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKIEATDNDLGVNAEITYSIYH 92
PVS+ V + D+NDNAP P +++ E + +I A D D G NA I Y I
Sbjct: 1041 PVSIQVTVQDVNDNAPVFPA-EEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQI-- 1097
Query: 93 VSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSVVPGPNT 150
V F++D SG + L A ++Y I VQAT + S+ V V +V N
Sbjct: 1098 VEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT-SAPLVSRATVHVRLV-DQND 1155
Query: 151 RSPVFQQ-----NTYDVNVSE 166
SPV N Y N S+
Sbjct: 1156 NSPVLNNFQILFNNYVSNRSD 1176
>sp|P70407|CADH9_MOUSE Cadherin-9 OS=Mus musculus GN=Cdh9 PE=2 SV=2
Length = 786
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 20/188 (10%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
+ + + LDR+ + R + I R K G + ++DINDN P+ +
Sbjct: 109 IHAAKRLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 167
Query: 57 PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
P + G + Q+ +A D + G +A++ YSI G F +DP SG+I+T
Sbjct: 168 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 222
Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
++ EQY + +QA D GG+ S T V +++ N P F Q+TY N E A
Sbjct: 223 MSRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSLESAP 281
Query: 170 INSTVATI 177
+ + + I
Sbjct: 282 LGTHLGRI 289
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 18 KFRFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEAR---RQI 70
K ++QV+ A++ G + + TVN L D+N+N PR P Q + E+ +
Sbjct: 228 KEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSLESAPLGTHL 286
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSI 124
+I+A D D+G NAE+ YSI G F + D + G+I L ++ Y++
Sbjct: 287 GRIKANDPDMGENAELEYSI--AEGEGSDMFDVITDKDTQEGIITVKQNLDFEKKMLYTL 344
Query: 125 TVQATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINST 173
V A++T G +V++SV V P PVF + +Y + V E S
Sbjct: 345 RVDASNTHPDPRFLHLGPFKDSAMVKISVEDVDEP----PVFSKLSYLMEVDEDVKEGSI 400
Query: 174 VATIT 178
+ +T
Sbjct: 401 IGQVT 405
>sp|Q6KEQ9|PC11X_PIG Protocadherin-11 X-linked OS=Sus scrofa GN=PCDH11X PE=2 SV=1
Length = 1117
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 39 LTVNLNDINDNAPRL--PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNT 96
L + + D NDNAP P + + Q+ KI A D D G NAEI Y + + +
Sbjct: 452 LLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQLTKISAMDADSGRNAEINYLLGFDAPS 511
Query: 97 GLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSP 153
+F +D R+G++ KL E+YS TV A D G T V V V N SP
Sbjct: 512 ---EFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSP 568
Query: 154 VFQQNTYDVNVSEGASINSTVATITVS 180
VF N Y+ V E + TV ITV+
Sbjct: 569 VFTHNEYNFYVPENLPRHGTVGLITVT 595
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 4 VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------RLP 54
V + N+ D + F V A + + S +T+N+ D+NDN P
Sbjct: 624 VIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVPSSNYSFE 683
Query: 55 MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG 114
++PP + + + A DND G+NAE+ YS+ + GL F ID SG I
Sbjct: 684 LVPP----STNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGL--FIIDQTSGNITLKE 737
Query: 115 KLIAGE--QYSITVQATDTGGKSS 136
K + + + + V+A D G S
Sbjct: 738 KCVFADLGLHRLVVKAKDLGQPDS 761
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 37 VSLTVNLNDINDNAPRLP-MIPPIQIQAGEARRQIVKIEAT-DNDLGVNAEITYSIYHVS 94
V + + DINDNAP P + I I A + AT D D G+N Y +
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPDTGINGVQNYHLIK-- 180
Query: 95 NTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTG--GKSSQTI 139
G F +D VIET +LI ++ Y + ++ D G +SS I
Sbjct: 181 --GQSIFGLD----VIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAI 234
Query: 140 VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++VSV + R PVF++N +V++ E A + S+V +
Sbjct: 235 LQVSVADTNDNR-PVFKENEIEVSIPENAPVGSSVTQL 271
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP-----RLPMI 56
L+V KE LDR+ + + ++ + S L V++ D NDN P + +
Sbjct: 201 LIVQKE-LDREEKD--TYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVS 257
Query: 57 PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH-VSNTGLHKFRIDPRSGVIETTGK 115
P G + + ++ ATD D+G NA+I + + +SN F ++ +G+I
Sbjct: 258 IPENAPVGSS---VTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEP 314
Query: 116 LIAGE--QYSITVQATDTGGKSSQTIVEVSV------VPGPNTRSPVFQQNTYDVNVSEG 167
L E + + V A+D G ++ +V V+V +P + R + N V +SE
Sbjct: 315 LDREESPNHKLLVLASDGGLTPARAMVLVNVTDINDNIPSIDIRYIINPING-TVVLSEN 373
Query: 168 ASINSTVATITVS 180
A +N+ +A ITV+
Sbjct: 374 APLNTKIALITVT 386
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 9 LDRDPPNPG-KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ--IQAGE 65
LDRD PN ++RF V A+++ G + VNL DINDNAP P + G
Sbjct: 1585 LDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTENGT 1644
Query: 66 ARRQIVKIEATDND---LGVNAEITYSIYH---VSNTGLHKFRIDPRSGVIETTGKLIAG 119
A ++ + A D D G NA + YSI TG F I+P +GVI+T +
Sbjct: 1645 AGMVVMTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTAVCCLDR 1704
Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY--DVNVSEGASINST- 173
E+ YSI V A D GG + V N P F ++ + +V+ ++G ++
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIR-VKDINDMPPQFTKDEWFTEVDETDGTALPEMP 1763
Query: 174 VATITV 179
+ T+TV
Sbjct: 1764 ILTVTV 1769
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 39 LTVNLNDINDNAPRLP----MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
+ V + D+NDN P P ++ + ++K+ ATD D GVN ++ YSI
Sbjct: 954 VVVFITDVNDNKPVFKDCSTYYPKVE-EGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQP 1012
Query: 95 NTGLHKFRIDPRSGVIETTGKLI-----AGEQYSITVQATDTGGKSSQTIVEVSV-VPGP 148
N KF +D +G + +T K+ G+ S+TV+ATD G S + + +V +
Sbjct: 1013 NQKGTKFTVDEETGEV-STNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDV 1071
Query: 149 NTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
N P+F + Y NV + ASI + + ++ S
Sbjct: 1072 NDNPPLFDRQKYVENVKQDASIGTNILRVSAS 1103
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 4 VSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQA 63
++KE D P + V A E G S V LT+ + D+NDNAP+ + P Q
Sbjct: 708 LAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFEL-PDYQAHN 765
Query: 64 GEAR----RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
+ I++++A D+D G NAEI Y + F +D +G+I +L A
Sbjct: 766 VDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD------DHFAVD-SNGIIVNNKQLDAD 818
Query: 120 EQ---YSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
Y V A D G + V V N P F Q Y NV E A N+ V
Sbjct: 819 NNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVT 878
Query: 176 TITVS 180
T+ S
Sbjct: 879 TVVAS 883
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 66/170 (38%), Gaps = 7/170 (4%)
Query: 17 GKFRFQVIAREKQGTAASVPV-SLTVNLNDINDNAPRLPMIPPIQ--IQAGEARRQIVKI 73
GKF + QG + V S TV + D+NDN P ++ Q I+++
Sbjct: 1041 GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRV 1100
Query: 74 EATDNDLGVNAEITYSIYHVSN-TGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTG 132
A+D D N I YS+ N L F I SG I K + E Y + A D G
Sbjct: 1101 SASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI-VLKKPLDRETYKLEAMAQDKG 1159
Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVS 180
VEV + V PV+ Y + V E + V +I S
Sbjct: 1160 YPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYVKENMPVGGKVVSIKAS 1209
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 38 SLTVNLNDINDNAPRLPMIPPIQIQAGEA-RRQIVKIEATDNDLGV-NAEITYSIYHV-S 94
++ + L D+ND P + GE ++ ++ A D D N ++ Y I
Sbjct: 1284 TVYIMLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAIDKDGTFPNNQVYYYIVDSPR 1343
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD---------TGGKSSQTIVEVS 143
N G F I+ +SG I T ++ Y++ V+A D G S + +
Sbjct: 1344 NEGKEFFEINLQSGEIFTKTVFDREKKGAYALEVEARDGAPSARPNSNGPNSVTKFIRIG 1403
Query: 144 VVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+ N P F ++ Y+ V E I TV T+T
Sbjct: 1404 IA-DKNDNPPYFDKSLYEAEVDENEDIQHTVLTVT 1437
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 15 NPGKFRFQVIAREKQGTAASVPVSLT---VNLNDINDNAPRLPMIPPIQIQAGEARR--- 68
N +FR QV + + V+ + V L DINDN P +++ E +
Sbjct: 1820 NGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNKPHFERAN-VEVSVFEDTKVGT 1878
Query: 69 QIVKIEATDNDLGVNAEITYSI 90
++ K +ATD D G ++++YSI
Sbjct: 1879 ELEKFKATDPDQGGKSKVSYSI 1900
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 28/102 (27%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPR--------LP-MIPPIQIQAGEARR 68
+ + +++A + + +LTV + DINDNAP+ LP +PP R
Sbjct: 1931 RHQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLPEHVPP---------R 1981
Query: 69 QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVI 110
++V+I ATD+D SN +FR+DP + I
Sbjct: 1982 KVVEILATDDDDRSK----------SNGPPFQFRLDPSADDI 2013
>sp|Q9HC56|PCDH9_HUMAN Protocadherin-9 OS=Homo sapiens GN=PCDH9 PE=1 SV=2
Length = 1237
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
YL+ + LD + +F F+++A + + + + V L D NDN P P I+
Sbjct: 419 YLLETSSLLDYE--GTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQ-PVIE 475
Query: 61 IQAGEARRQ---IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
+ E R+ + I ATD D G NA+I Y + F +D ++GV+ +
Sbjct: 476 LSVSENNRRGLYLTTISATDEDSGKNADIVYQL----GPNASFFDLDRKTGVLTASRVFD 531
Query: 118 AGEQ--YSITVQATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
EQ + TV A D G SQ V V+V+ N SP F N + VSE ST
Sbjct: 532 REEQERFIFTVTARDNGTPPLQSQAAVIVTVL-DENDNSPKFTHNHFQFFVSENLPKYST 590
Query: 174 VATITVSRLASG------CAIMNKEEN 194
V ITV+ +G +I+N +N
Sbjct: 591 VGVITVTDADAGENKAVTLSILNDNDN 617
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP--- 57
Y V K N+ D + F V A + S +T+N+ D+NDN+P + P
Sbjct: 623 YSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNT 682
Query: 58 -----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
P+ G + ++ A D D G+NAE+ Y+I +N GL FRIDP +G I
Sbjct: 683 SFKLVPLSAIPGSV---VAEVFAVDVDTGMNAELKYTIVSGNNKGL--FRIDPVTGNITL 737
Query: 113 TGKLIAGE--QYSITVQATDTG-GKSSQTIVEV 142
K + + + V +D G KS T+V V
Sbjct: 738 EEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLV 770
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIE 74
+F F V AR+ ++ V + D NDN+P+ Q E + I
Sbjct: 537 RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVIT 595
Query: 75 ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
TD D G N +T SI + ++ F +DP SGVI++ +Q Y+ V+ATD G
Sbjct: 596 VTDADAGENKAVTLSILNDND----NFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGG 651
Query: 133 GKSSQTIVEVSV-VPGPNTRSPV 154
+ +V++ V N SPV
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGT-AASVPVSLTVNLNDINDNAP---------R 52
++ ++NLDR+ + + +V E GT S L V ++D+NDN P
Sbjct: 204 LIVQQNLDREQKDTYVMKIKV---EDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260
Query: 53 LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIE 111
+P P+ ++++ ATD D+G NAEI Y V+ F ++ +G+I
Sbjct: 261 IPENAPVGTS-------VIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 313
Query: 112 TTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV------PGPNTR---SPVFQQNTY 160
L E + +TV A+D ++ V ++V P + R SP+
Sbjct: 314 VQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPI----NG 369
Query: 161 DVNVSEGASINSTVATITVS 180
V +SE +N+ +A ITVS
Sbjct: 370 TVYLSEKDPVNTKIALITVS 389
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGE-----ARRQIVKIEATDNDLGVNAEITYSIY 91
+ + + + D NDNAP P P I I E +R I ATD D G N Y +
Sbjct: 126 IKIKIIVKDTNDNAPMFPS-PVINISIPENTLINSRFPIPS--ATDPDTGFNGVQHYELL 182
Query: 92 HVSNTGLHKFRIDPRSGVIET-----TGKLIAGEQ--------YSITVQATDTGG--KSS 136
+ G F +D ++ET +LI + Y + ++ D G KSS
Sbjct: 183 N----GQSVFGLD----IVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSS 234
Query: 137 QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTV 174
I++V+V N PVF++ +V++ E A + ++V
Sbjct: 235 TAILQVTVS-DVNDNRPVFKEGQVEVHIPENAPVGTSV 271
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 15 NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
N + F V + ++ + ++T+N+ D NDNAP+ P+ ++ G +
Sbjct: 2945 NINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIR 3004
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITVQ 127
+ I+ D D G+N+E+ Y I + ++ G KF++D +G I LI+ + + ITV
Sbjct: 3005 VTAID--DKDFGLNSEVEYFISNDNHLG--KFKLDNDTGWISVASSLISDLNQNFFITVT 3060
Query: 128 ATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
A D G SSQ V ++V N +P F Q+ + E SI S V T++
Sbjct: 3061 AKDKGNPPLSSQATVHITVTE-ENYHTPEFSQSHMSATIPESHSIGSIVRTVS 3112
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
+++ LDR+ + ++ ++ R G +S + + + ++D+ND+ P+ I
Sbjct: 1796 LIATRRLDRE----RRSKYSLLVRADDGLQSS-DMRINITVSDVNDHTPKFSRPVYSFDI 1850
Query: 57 PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
P I + I ATD+D GVN EITY + G+ F ++P +GV T +L
Sbjct: 1851 PEDTIPGS----LVAAILATDDDSGVNGEITYIVNEDDEDGI--FFLNPITGVFNLT-RL 1903
Query: 117 IAGE---QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINST 173
+ E Y +TV+A D GG+ + V +++ N P+F N+Y ++ E + ST
Sbjct: 1904 LDYEVQQYYILTVRAEDGGGQFTTIRVYFNIL-DVNDNPPIFSLNSYSTSLMENLPVGST 1962
Query: 174 VATITVSRLASG 185
V V+ G
Sbjct: 1963 VLVFNVTDADDG 1974
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
F F VIA + QG + TV+ + DINDNAP+ + Q E+ Q++++
Sbjct: 1175 FSFTVIATD-QGIPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATISESAANLTQVLRV 1232
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
A+D D G N I YSI + +F ID SG + GKL A YS+ +QA D+
Sbjct: 1233 SASDVDEGNNGLIHYSI--IKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDS 1290
Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
G + +++ + N +P F ++T V+V E I V+++T + SG
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR 67
+LDR+ + V+A + S + V+L DINDN+P + P+Q A
Sbjct: 646 SLDRE--EQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSP---VFYPVQYFAHIKE 700
Query: 68 RQ-----IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
+ I + ATD DLG N + YSI S +F+++ +SGVI T L E+
Sbjct: 701 NEPGGSYITTVSATDPDLGTNGTVKYSI---SAGDRSRFQVNAQSGVISTRMALDREEKT 757
Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
Y + + ATD G S Q IV ++V+ + PVF Q Y V E ++ V +++
Sbjct: 758 AYQLQIVATDGGNLQSPNQAIVTITVLDTQD-NPPVFSQVAYSFVVFENVALGYHVGSVS 816
Query: 179 VSRL 182
S +
Sbjct: 817 ASTM 820
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 23 VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQI-QAGEARRQI 70
VI RE+Q G + + + + D+NDN+P L I + + + +A I
Sbjct: 853 VIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSI 912
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
+ +A D D GVN + YS+ + F I+ ++G I G L + Y I + A+
Sbjct: 913 FQAKAVDPDEGVNGMVLYSL---KQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILAS 969
Query: 130 DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
D G + S +++ V N SPVF Q +Y+V +SE +NS + S SG
Sbjct: 970 DMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSG 1026
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 24 IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
I+ QG V + L V L D+ND P + E +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 80 LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
LG N + +S+ + T FR+DP SG + T L EQ YS+ V ATD G +S
Sbjct: 612 LGDNGTVRFSLQE-AETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQS 670
Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
S + VS++ N SPVF Y ++ E S + T++ +
Sbjct: 671 SMARINVSLL-DINDNSPVFYPVQYFAHIKENEPGGSYITTVSAT 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 37 VSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVS 94
S+TVN+ D+NDN+P P ++ + ++ + ATD D G NA I Y++ S
Sbjct: 3178 CSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-QSS 3236
Query: 95 NTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTR 151
++ L F IDP +GVI T G L + Y +TV+A + + + V++ + G N
Sbjct: 3237 DSDL--FVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEY 3294
Query: 152 SPVFQQNTYDVNVSEGASINSTVATITVS 180
P F Y +SE A + V + S
Sbjct: 3295 VPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 41 VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
+ L DINDN P P + ++ G+ + I+++ A D D G NA +TY+I ++
Sbjct: 1728 ITLQDINDNPPVFPTDMLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYTIISGAD-- 1784
Query: 98 LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
FRIDP SG + T +L +YS+ V+A D G +SS + ++ V N +P F
Sbjct: 1785 -DSFRIDPESGDLIATRRLDRERRSKYSLLVRA-DDGLQSSDMRINIT-VSDVNDHTPKF 1841
Query: 156 QQNTYDVNVSEGASINSTVATITVSRLASG 185
+ Y ++ E S VA I + SG
Sbjct: 1842 SRPVYSFDIPEDTIPGSLVAAILATDDDSG 1871
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEAR 67
LDR+ + V+A +K + S + V + DINDN P + ++I
Sbjct: 2112 LDRE--EVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT 2169
Query: 68 -RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
I+++ A D D G N ++ Y I V+ +FRID +G I T K + E+ Y
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGI--VNGNTNQEFRIDSVTGAI-TVAKPLDREKTPTYH 2226
Query: 124 ITVQATDTGGKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSE 166
+TVQATD G VS+V N PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
K+ + AR+ S L + + D+NDNAP P I +I + R+I+ + A
Sbjct: 2634 KYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAM 2693
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
D D G N ++ Y I V+ + F I+ +G I + L + Y +T++++D G
Sbjct: 2694 DKDSGPNGQLDYEI--VNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSP 2751
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
S T V+V + + N +P F Q + +V E + + TV +T S
Sbjct: 2752 SQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTS 2797
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 30/202 (14%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
+VSK LDR+ P +++ V +K + + V + DINDN P + Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256
Query: 63 AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
AG +V ++ A D D G NA+I Y + F++DP +G+I L
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312
Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
A QYS+TVQA D G G++ I + V N PV F + +V
Sbjct: 313 FEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDV----NDNDPVVKFRYFPATSRYASVD 368
Query: 166 EGASINSTVATITVSRLASGCA 187
E A + + VA +TV+ S A
Sbjct: 369 ENAQVGTVVALLTVTDADSPAA 390
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 15/152 (9%)
Query: 38 SLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYH 92
S+ V + D+NDN PR P P G + + TD D+G N+E+ YS+
Sbjct: 2451 SVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSF---VFAVTVTDADIGPNSELHYSL-- 2505
Query: 93 VSNTGLHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGG--KSSQTIVEVSVVPGPNT 150
S KF IDP G I G L + + +V D G K+ T V V V +
Sbjct: 2506 -SGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF 2564
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
++ T+ E ++S V TIT S L
Sbjct: 2565 PKVRAKEQTF--MFPENQPVSSLVTTITGSSL 2594
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 32 AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
A S SL + +NDIND+ P PP +G I ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSG--------ISATDGDSG 505
Query: 82 VNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLI--AGEQYSITVQATDTGGKSSQ 137
+NA + YSI VS GL F I SG++ T +G L Q + + A D G
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARDQGVHPKV 563
Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
+ ++ V + N PVF Q YDV+V E A
Sbjct: 564 SYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENA 596
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
LDR+ + + + +K + S V + +N+ D NDNAPR I + +
Sbjct: 2731 LDRE--KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVPENSPLG 2788
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
+ ++ +D D+G+NA YSI S F I+P +G I + L ++Y I
Sbjct: 2789 YTVTRVTTSDEDIGINAISRYSIMDAS----LPFTINPSTGDIVISRPLNREDTDRYRIR 2844
Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
V A D+G S + V N +P F + +Y ++ E I S V +
Sbjct: 2845 VSAHDSGWTVSTDV--TIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVTQV 2894
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 17 GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
G ++ +++A + S V LTV ++D+NDN+P + ++ E+ + K+
Sbjct: 960 GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQL-SYEVTLSESEPVNSRFFKV 1018
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
+A+D D G N EI Y+I NTG F I P + I++ ++Y + V A+D
Sbjct: 1019 QASDKDSGANGEIAYTIAE-GNTG-DAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRA 1076
Query: 133 GKSSQTIVEVSVV-PGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+ V V+V+ N P+F Y E S V ++
Sbjct: 1077 VEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 6 KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
K LDR+ + ++ V+A ++ S V++TV L D+NDN P E
Sbjct: 1055 KSELDRELQD--RYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112
Query: 66 ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
R + K+ A D D G N E+ YS ++ +S T H+F R ++
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD---RESLMRR 1169
Query: 113 TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
G + +S TV ATD G Q V V + N +P F ++ Y +SE A+
Sbjct: 1170 RGTAV----FSFTVIATDQGIPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATISESAA 1224
Query: 170 INSTVATITVSRLASG 185
+ V ++ S + G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 38 SLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDNDLGVNAEITYSIYHVSN 95
++ + L N+ PR + +I + IV ++ A+D DLG + E+ Y I+ N
Sbjct: 3283 TVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIF--GN 3340
Query: 96 TGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSSQTIVEVSV---VPGPNT 150
+ F+I+ ++G I +G L E+ S+ V A + G I EV+V V N
Sbjct: 3341 SRKKGFQINKKTGQIYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND 3400
Query: 151 RSPVFQQNTYDVNVSEGASINSTVATIT 178
P+F N Y V +SEG I + V ++
Sbjct: 3401 -PPIFTLNIYSVQISEGVPIGTHVTFVS 3427
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 31 TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNA--E 85
+A + P + V + D+NDNAP P P I + E + RQ++ ATD+D+G N
Sbjct: 113 SAPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDH 171
Query: 86 ITYSIYHVSNTGLHKFRIDPR---SGV-----IETTGKLI--AGEQYSITVQATDTGGKS 135
+Y I + G +FR+D SG + + G L QY + V+ D G
Sbjct: 172 RSYRIIRGNEAG--RFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPK 229
Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
+ ++V+V V N PVF + Y V E A + S+V + + G
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
+T+ + D+NDN +PM A + I I A D D G N EI Y I
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEII--- 1568
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
N F +D SG + L+ + Y++ V ATD G + ++ E++++ P
Sbjct: 1569 NGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIIL-QGLDGP 1627
Query: 154 VFQQNTYDVNVSEGASINSTVATI 177
VF Q Y + EG I + V +I
Sbjct: 1628 VFTQPKYITILKEGEPIGTNVISI 1651
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 32 AASVPVSLTVNLN----DINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNA 84
+ ++P++ T LN D NDN P P + + E R + + ATD+D G NA
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGDNA 1348
Query: 85 EITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEV 142
++ YSI +N G F I P +G I KL Q Y + + A D G + + V
Sbjct: 1349 DLYYSITGTNNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSV 1406
Query: 143 SV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+ V N P F ++ E I ++V ++T
Sbjct: 1407 VIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
++ + A+++ S +S+ +++ D NDN P P G+ + IV+
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGT 1437
Query: 73 ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
+ A D D +N +++Y+I G H F ID G I T ++ + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYTIIQQMPRGNH-FTIDEVKGTIYTNAEIDREFANLFELTV 1496
Query: 127 QATD 130
+A D
Sbjct: 1497 KAND 1500
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPIQIQAGEARRQIVKIEATDN 78
+ + R + G + + N+ D+NDN P + ++ ++ TD
Sbjct: 1912 YILTVRAEDGGGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDA 1971
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATD 130
D G+N+++TYSI S L +F +D ++GV++ L Q Y++ VQ D
Sbjct: 1972 DDGINSQLTYSI--ASGDSLGQFTVD-KNGVLKVLKALDRESQSFYNLVVQVHD 2022
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 24/185 (12%)
Query: 7 ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------MIPPIQ 60
++LDR+ +F + A + A + ++ V ++D+NDN P IP
Sbjct: 2320 QSLDRETKE--RFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP--- 2374
Query: 61 IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--A 118
+ ++ + A+D D NA I G +F I+P +G I T+ L
Sbjct: 2375 -EDAPTGTDVLLVNASDADASKNAVIRII------GGNSQFTINPSTGQIITSALLDRET 2427
Query: 119 GEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
+ Y++ V +D G SS T V V+V N P FQ + Y ++ S V
Sbjct: 2428 KDNYTLVVVCSDAGSPEPLSSSTSVLVTVT-DVNDNPPRFQHHPYVTHIPSPTLPGSFVF 2486
Query: 176 TITVS 180
+TV+
Sbjct: 2487 AVTVT 2491
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
+ V+A + +A+ SL V L DINDN P L + ++ ++ +++TD
Sbjct: 3476 YNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLTVSEGEVMENKRPGTLVMTLQSTDP 3535
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTG--G 133
DL N + ++ Y +S + +GV+ TT + I EQ + ++V D+G
Sbjct: 3536 DLPPN-QGPFTYYLLSTGPATSYFSLSTAGVLSTT-REIDREQIADFYLSVVTKDSGVPQ 3593
Query: 134 KSSQTIVEVSVV 145
SS V ++V+
Sbjct: 3594 MSSTGTVHITVI 3605
>sp|Q9ULB4|CADH9_HUMAN Cadherin-9 OS=Homo sapiens GN=CDH9 PE=2 SV=2
Length = 789
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM------I 56
+ + + LDR+ + R + I R K G + ++DINDN P+ +
Sbjct: 110 IHAAKKLDREEKSLYILRAKAIDR-KTGRQVEPESEFIIKIHDINDNEPKFTKDLYTASV 168
Query: 57 PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
P + G + Q+ +A D + G +A++ YSI G F +DP SG+I+T
Sbjct: 169 PEMS-GVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIKTALPD 223
Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
++ EQY + +QA D GG+ S T V +++ N P F Q+TY N E
Sbjct: 224 MSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNNNPPRFPQSTYQFNSPESVP 282
Query: 170 INSTVATI 177
+ + + I
Sbjct: 283 LGTHLGRI 290
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 31/183 (16%)
Query: 20 RFQVI--AREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEA---RRQIVK 72
++QV+ A++ G + + TVN L D+N+N PR P Q + E+ + +
Sbjct: 231 QYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ-STYQFNSPESVPLGTHLGR 289
Query: 73 IEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIAGEQ--YSITV 126
I+A D D+G NAE+ YSI G F + D + G+I L Q Y++ V
Sbjct: 290 IKANDPDVGENAEMEYSI--AEGDGADMFDVITDKDTQEGIITVKQNLDFENQMLYTLRV 347
Query: 127 QATDT---------GGKSSQTIVEVSV--VPGPNTRSPVFQQNTYDVNVSEGASINSTVA 175
A++T G +V++SV + P PVF + +Y + V E S +
Sbjct: 348 DASNTHPDPRFLHLGPFKDTAVVKISVEDIDEP----PVFTKVSYLIEVDEDVKEGSIIG 403
Query: 176 TIT 178
+T
Sbjct: 404 QVT 406
>sp|Q3SWX5|CADH6_BOVIN Cadherin-6 OS=Bos taurus GN=CDH6 PE=2 SV=1
Length = 790
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 33/194 (17%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGE 65
N+DR+ N +++ + A++ G + + TVN L D+NDN PR P Q + E
Sbjct: 223 NMDRE--NREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ-STYQFKTPE 279
Query: 66 AR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIA 118
+ I +I+A+D D+G NAEI YSI GL F + + + G+I T KL+
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSI--TEGEGLDMFDVITDQETQEGII-TVKKLLD 336
Query: 119 GEQ---YSITVQATDTG----------GKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNV 164
E+ Y++ V+A++ K S T+ + V V P PVF + Y + +
Sbjct: 337 FEKKKVYTLKVEASNPHVEPRFLYLGPFKDSATVRIMVEDVDEP----PVFSKLAYILQI 392
Query: 165 SEGASINSTVATIT 178
E A IN+T+ ++T
Sbjct: 393 REDAQINTTIGSVT 406
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 20/191 (10%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL------PMI 56
+ + + LDR+ R Q I R K G + ++DINDN P +
Sbjct: 110 IQATKRLDREEKPVYILRAQAINR-KTGRPVEPESEFIIKIHDINDNEPIFTKEVYTATV 168
Query: 57 PPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
P + G Q+ +A D G +A++ YSI G F ++ +G+I+T
Sbjct: 169 PEMS-DVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKTALLN 223
Query: 117 IA---GEQYSITVQATDTGGK----SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
+ EQY + +QA D GG+ S T V +++ N P F Q+TY E +
Sbjct: 224 MDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT-DVNDNPPRFPQSTYQFKTPESSP 282
Query: 170 INSTVATITVS 180
+ + I S
Sbjct: 283 PGTPIGRIKAS 293
>sp|Q9Y5E1|PCDB9_HUMAN Protocadherin beta-9 OS=Homo sapiens GN=PCDHB9 PE=2 SV=2
Length = 797
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 45 DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
D+NDNAP+ + QA E IVK+ A D D GVNAE++YS + S L F
Sbjct: 234 DVNDNAPQFAQ-ALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTF 292
Query: 102 RIDPRSGVIETTGKLIAGE---QYSITVQATDTGGKSSQTIVEVSVV 145
+I+P SG I +L+ E Y I +QA D GG S++ V + V+
Sbjct: 293 QINPFSGEI-FLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVL 338
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 1 YLVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ 60
Y+++++ LDR+ + ++ + + S+T+ ++D+NDNAP
Sbjct: 401 YILMTEGALDRE--SKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTL 458
Query: 61 I--QAGEARRQIVKIEATDNDLGVNAEITYSIY-----HVSNTGLHKFRIDPRSGVIETT 113
+ I + ATD D G NA++TYS+ H+ L D +
Sbjct: 459 FVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRS 518
Query: 114 GKLIAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPV 154
A + + V A+D G SS+ +V V V+ N SP
Sbjct: 519 LDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDA-NDNSPF 560
>sp|Q8TAB3|PCD19_HUMAN Protocadherin-19 OS=Homo sapiens GN=PCDH19 PE=1 SV=3
Length = 1148
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
LVV K +LDR+ + F++ A + V L++ + D NDN P
Sbjct: 190 LVVEK-SLDRE--TQSHYSFRITALDGGDPPRLGTVGLSIKVTDSNDNNPVFSESTYAVS 246
Query: 56 IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG 114
+P + ++++ A+D D G N ++ YS Y +V++ F+IDP SG++ TG
Sbjct: 247 VP----ENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTVTG 302
Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV---FQQNTYDVNVSEGA 168
L G Y + VQA D G S +V+V V N PV N+ V VSE A
Sbjct: 303 ALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSESA 362
Query: 169 SINSTVATITVSRLASG 185
+A + VS SG
Sbjct: 363 PPGYVIALVRVSDRDSG 379
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+V+K+ +DRD + +I+ E ++ + V + V + D+NDNAP P I++
Sbjct: 80 LLVTKQKIDRDLLCRQSPKC-IISLEVMSSSMEICV-IKVEIKDLNDNAPSFPAAQ-IEL 136
Query: 62 QAGEARRQIVKI---EATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG---VIETTG 114
+ EA +I A D D G TY + GL K R D V+E +
Sbjct: 137 EISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSL 196
Query: 115 KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
YS + A D G V +S+ V N +PVF ++TY V+V E + N+
Sbjct: 197 DRETQSHYSFRITALDGGDPPRLGTVGLSIKVTDSNDNNPVFSESTYAVSVPENSPPNTP 256
Query: 174 VATITVS 180
V + S
Sbjct: 257 VIRLNAS 263
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
LDR+ + ++ + AR+ S TV + D NDN P P I +
Sbjct: 411 LDREQHD--QYNLTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTP 468
Query: 67 RRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTGKLIAGEQ-- 121
++ + A D DLG+N ++Y I V + + + I+P SG I + EQ
Sbjct: 469 GAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYAL-RSFNHEQTK 527
Query: 122 -YSITVQATDTGGKSSQTIVEVSVV 145
+ V A D G S Q+ V V+
Sbjct: 528 AFEFKVLAKDGGLPSLQSNATVRVI 552
>sp|Q63315|CAD22_RAT Cadherin-22 OS=Rattus norvegicus GN=Cdh22 PE=1 SV=1
Length = 813
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQI 61
+ + E LDR+ R Q AR++ P S + + DIND+ PR P I
Sbjct: 116 IHATERLDREQKTFYTLRAQ--ARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGS 173
Query: 62 QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
A G + Q++ +A D G +A + YS+ G H F +DP++GVI T
Sbjct: 174 VAELSPTGTSVMQVMASDADDPTYGSSARLVYSVL----DGEHHFTVDPKTGVIRTAVPD 229
Query: 117 I---AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
+ + E+Y + +QATD G+ S + VV N P F Q Y ++ E A I
Sbjct: 230 LDRESQERYEVVIQATDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQESAPI 289
Query: 171 NSTVATI 177
+ V +
Sbjct: 290 GTAVGRV 296
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 47 NDNAPRLPM-IPPIQIQ-AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI- 103
NDN PR P + IQ + + +++A D+D+G N ++TY + S +G F++
Sbjct: 268 NDNPPRFPQKMYQFSIQESAPIGTAVGRVKAEDSDVGENTDMTYHLREESGSGGDAFKVT 327
Query: 104 ---DPRSGVIETTGKLIAGEQ--YSITVQA---------TDTGGKSSQTIVEVSVVPGPN 149
D + +I L Q +++ ++A D G Q IV V+V
Sbjct: 328 TDSDTQEAIIVVQKHLDFESQQVHTVVLEALNKFVDPRFADLGTFRDQAIVRVAVT--DV 385
Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITV 179
P F+ + + V E A + S V +T
Sbjct: 386 DEPPEFRPPSGLLEVQEDAQVGSLVGVVTA 415
>sp|Q9UJ99|CAD22_HUMAN Cadherin-22 OS=Homo sapiens GN=CDH22 PE=2 SV=2
Length = 828
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQI 61
+ + E LDR+ R Q AR++ P S + + DIND+ PR P I
Sbjct: 119 IHAMERLDREQKTFYTLRAQ--ARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGS 176
Query: 62 QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
A G + Q++ +A D G +A + YS+ G H F +DP++GVI T
Sbjct: 177 VAELSPTGTSVMQVMASDADDPTYGSSARLVYSVL----DGEHHFTVDPKTGVIRTAVPD 232
Query: 117 I---AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
+ + E+Y + +QATD G+ S + VV N P F Q Y ++ E A I
Sbjct: 233 LDRESQERYEVVIQATDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQESAPI 292
Query: 171 NSTVATI 177
+ V +
Sbjct: 293 GTAVGRV 299
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 47 NDNAPRLPM-IPPIQIQ-AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI- 103
NDN PR P + IQ + + +++A D+D+G N ++TY + S++G F++
Sbjct: 271 NDNPPRFPQKMYQFSIQESAPIGTAVGRVKAEDSDVGENTDMTYHLKDESSSGGDVFKVT 330
Query: 104 ---DPRSGVIETTGKLIAGEQ--YSITVQA---------TDTGGKSSQTIVEVSVVPGPN 149
D + +I +L Q +++ ++A D G Q IV V+V
Sbjct: 331 TDSDTQEAIIVVQKRLDFESQPVHTVILEALNKFVDPRFADLGTFRDQAIVRVAVT--DV 388
Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITV 179
P F+ + + V E A + S V +T
Sbjct: 389 DEPPEFRPPSGLLEVQEDAQVGSLVGVVTA 418
>sp|O60330|PCDGC_HUMAN Protocadherin gamma-A12 OS=Homo sapiens GN=PCDHGA12 PE=2 SV=1
Length = 932
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 45 DINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKF 101
D NDNAP P + E Q++ + ATD D GVNAE+ YS +V + F
Sbjct: 234 DANDNAPAFAQ-PEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVF 292
Query: 102 RIDPRSGVIETTGKLIAGEQ--YSITVQATDTGGKSSQTIVEVSVV 145
++D SG I T G+L E Y + VQA D G S++ V ++V+
Sbjct: 293 KLDCNSGTISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVL 338
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIP-------PIQIQAGEARRQ 69
+ +V+AR+ S VSL++ + D NDNAP + P +P + ++ E
Sbjct: 528 LQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYL 587
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQ 127
+ K+ A D D G NA ++Y + S GL F + +G + T L+ + + S+ V
Sbjct: 588 VTKVVAVDRDSGQNAWLSYRLLKASEPGL--FSVGLHTGEVRTARALLDRDALKQSLVVA 645
Query: 128 ATDTG 132
D G
Sbjct: 646 VQDHG 650
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 17 GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--QIVKIE 74
G ++ +V A + G +A V +TV D+NDNAP + + + R I +
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVL--DVNDNAPEVVLTSLASSVPENSPRGTLIALLN 370
Query: 75 ATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET--TGKLIAGEQ---YSITVQAT 129
D D N ++ I G F+++ G + T ++ EQ Y+ITV AT
Sbjct: 371 VNDQDSEENGQVICFI-----QGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTAT 425
Query: 130 DTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE----GASINSTVA 175
D G T +S+ V N PVF Q +Y + E G S+ S A
Sbjct: 426 DRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTA 476
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP----PIQIQAGEARRQIVKI 73
K + A + A + SLTV++ D+NDN+P +P P ++ + ++ +
Sbjct: 3161 KHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTVIHL 3218
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
ATD D G NA I Y++ S++ L F IDP GVI T G L + Y +TV+A +
Sbjct: 3219 NATDADSGANAVIAYTV-QSSDSDL--FVIDPNMGVITTQGFLDFETKQSYHLTVKAFNV 3275
Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
+ + V + + G N P F Y VSE AS + V + S
Sbjct: 3276 PDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFAS 3325
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGEARR---QIVKI 73
F F V A ++ G + TV+ + DINDNAP+ + Q E Q++++
Sbjct: 1175 FSFTVTAMDR-GLPQPLKDQATVHVYMKDINDNAPKF-LKDFYQATVSETATNLTQVLRV 1232
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDT 131
A+D D G N I YSI + +F ID SG + GKL A YS+ +QA D+
Sbjct: 1233 SASDVDEGSNGLIHYSI--LKGNEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDS 1290
Query: 132 GGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
G + +S+ + N +P F ++T V+V E I V+++T + SG
Sbjct: 1291 GAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSG 1345
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 16/174 (9%)
Query: 15 NPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL---PMIPPI--QIQAGEARRQ 69
N + F V A ++ + ++T+N D NDN P+ P+ ++ G +
Sbjct: 2947 NINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFTPVTKNVKVG---TK 3003
Query: 70 IVKIEATDN-DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIA--GEQYSITV 126
++K+ A D+ D G+N+E+ Y + ++ G KF++D +G I L++ + + I V
Sbjct: 3004 LIKVTAVDDKDFGLNSEVEYFVSDGNHLG--KFKLDNDTGWISIASSLVSDLNQNFLIRV 3061
Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
A D G SSQ +V ++V N +P F QN + E SI S V T++
Sbjct: 3062 TAKDKGNPPLSSQAVVHITVTE-ENYHTPEFSQNHISATIPESHSIGSVVRTVS 3114
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQA 63
+LDR+ + ++A + S + V+L DINDN+P + P+Q IQ
Sbjct: 646 SLDRE--EQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSP---VFYPVQYFAHIQE 700
Query: 64 GE-ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ- 121
E + + ATD D+G N + YSI S +F+I +SGVI T L E+
Sbjct: 701 NEPGGSYVTTVSATDPDMGPNGTVKYSI---SAGDRSRFQIHAKSGVISTKMALDREEKT 757
Query: 122 -YSITVQATDTGGKSS--QTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
Y + V ATD G S Q IV V+V+ + PVF Q Y V E ++ V +++
Sbjct: 758 AYQLQVVATDGGNLQSPNQAIVTVTVLDTQD-NPPVFSQAAYSFVVFENVALGYHVGSVS 816
Query: 179 VSRL 182
+ +
Sbjct: 817 ATTM 820
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQ 60
+++ + LDR+ + ++ ++ R G +S + + + ++D+ND+ PR P+
Sbjct: 1796 LIATKRLDRE----HRSKYSLLVRADDGLQSS-DMRINITISDVNDHTPRFSRPVYSFDI 1850
Query: 61 IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE 120
+ + I ATD+D GVN EI+Y + G+ F ++ +GV T L
Sbjct: 1851 PEDTTPGSLVAAILATDDDSGVNGEISYVVEEDDGDGV--FFLNLVTGVFNLTRALDYET 1908
Query: 121 Q--YSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
Q Y +TV+A D GG+S+ TI + N PVF ++Y ++ E + STV
Sbjct: 1909 QQYYILTVRAEDGGGQST-TIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFN 1967
Query: 179 VSRLASG 185
V+ G
Sbjct: 1968 VTDADDG 1974
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 23 VIAREKQ----------GTAASVPVSLTVNLNDINDNAPR-LPMIPPIQ-IQAGEARRQI 70
VI RE+Q G A + + + + D+NDNAP L + I ++ +A I
Sbjct: 853 VIDREEQSFYQLKIVASGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSI 912
Query: 71 VKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-IAGEQYSITVQAT 129
+ +A D D GVN + YS+ + F I+ ++G I G L + Y + + A+
Sbjct: 913 FQAKAVDPDEGVNGRVLYSL---KQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVAS 969
Query: 130 DTG-GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
D G + S +I+ V N PVF Q +Y+V +SE +NS + S SG
Sbjct: 970 DMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQASDKDSG 1026
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAG-EA 66
LDR+ + V+A +K S + V + DINDN P + +QI+
Sbjct: 2112 LDRE--EVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILT 2169
Query: 67 RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE---QYS 123
I+++ A DND G N ++ Y I V +FRID +G I T K + E Y+
Sbjct: 2170 GTDIIQVSAADNDEGTNGQVRYGI--VGGNTHQEFRIDSVTGAI-TVAKSLDRETTPAYT 2226
Query: 124 ITVQATDTGG--KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
+TVQATD G ++ V ++++ N PVF+ + Y VNV E
Sbjct: 2227 LTVQATDRGSSPRTDSCTVAITLL-DMNDFVPVFELSPYSVNVPE 2270
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 41 VNLNDINDNAPRLP---MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
+ L DINDN P P + ++ G+ + I+++ A D D G NA +TY++ ++
Sbjct: 1728 ITLQDINDNPPVFPTDTLDLTVEENIGDGSK-IMQLTAMDADEGANALVTYALISGAD-- 1784
Query: 98 LHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVF 155
FRIDP SG + T +L +YS+ V+A D G +SS + ++ + N +P F
Sbjct: 1785 -DSFRIDPESGDLIATKRLDREHRSKYSLLVRA-DDGLQSSDMRINIT-ISDVNDHTPRF 1841
Query: 156 QQNTYDVNVSEGASINSTVATITVSRLASG 185
+ Y ++ E + S VA I + SG
Sbjct: 1842 SRPVYSFDIPEDTTPGSLVAAILATDDDSG 1871
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPI-QIQAGEARRQIVKIEAT 76
K+ + AR+ S L + + DINDNAP P + +I + R+I+ + AT
Sbjct: 2636 KYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSPRKILTVSAT 2695
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE--QYSITVQATDTGGK 134
D D G N ++ Y I V+ F I+ +G I + L + Y +TV+++D G
Sbjct: 2696 DKDSGPNGQLDYEI--VNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSP 2753
Query: 135 SSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
S T V+V + + N +P F Q + VSE + + TV +T S
Sbjct: 2754 SQSTSVKVIISILDENDNAPRFSQ-IFSAYVSENSPLGYTVTRVTTS 2799
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 24 IAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDND 79
I+ QG V + L V + D+ND P ++ E +++ + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGATDRD 611
Query: 80 LGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTGG--KS 135
LG N + +S+ N FR+DP SG + T L EQ Y +++ ATD G +S
Sbjct: 612 LGDNGTVRFSLQEAENDQ-RLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSPPQS 670
Query: 136 SQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
S V VS++ N SPVF Y ++ E S V T++ +
Sbjct: 671 STAQVNVSLL-DINDNSPVFYPVQYFAHIQENEPGGSYVTTVSAT 714
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQ 62
+VSK LDR+ P +++ V +K + + V + DINDN P + Q
Sbjct: 202 LVSKGGLDREV-TP-QYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPP---VFGSSHYQ 256
Query: 63 AGEARRQIV-----KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI 117
AG +V ++ A D D G NA+I Y + F++DP +G+I L
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGT----PFQMDPETGLITVREPLD 312
Query: 118 --AGEQYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPV-----FQQNTYDVNVS 165
A QYS+TVQATD G G++ I + V N PV F + +V
Sbjct: 313 FEARRQYSLTVQATDRGVPSLTGRAEAFIQLLDV----NDNDPVVKFRYFPATSRYASVD 368
Query: 166 EGASINSTVATITVS 180
E A + + VA +TV+
Sbjct: 369 ENAQVGTVVALLTVT 383
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 32 AASVPVSLTVNLNDINDNAPRLPM----------IPPIQIQAGEARRQIVKIEATDNDLG 81
A S SL + +NDIND+ P +PP +G + ATD D G
Sbjct: 454 ARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSG--------VSATDGDSG 505
Query: 82 VNAEITYSIYHVSNTGLHKFRIDPRSGVIETT--GKLI--AGEQYSITVQATDTGGKSSQ 137
+NA + YSI VS GL F I SG++ T+ G L Q + + A D G
Sbjct: 506 LNANLRYSI--VSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKV 563
Query: 138 TIVEVSV-VPGPNTRSPVFQQ-NTYDVNVSEGA 168
+ ++ V V N PVF Q Y+V+V E A
Sbjct: 564 SYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENA 596
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 31 TAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE---ARRQIVKIEATDNDLGVNAEIT 87
++ + P + V + D+NDNAP P P I + E + RQ++ ATD+D+G N
Sbjct: 113 SSPTYPTEVRVLVRDLNDNAPVFPD-PSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDH 171
Query: 88 YSIYHVSNTGLHKFRIDPR---SGVIETTGKLIAG-------EQYSITVQATDTGGKSSQ 137
+S VS +FR+D SG + G QY + V+ D G +
Sbjct: 172 HSYRIVSGNEAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRR 231
Query: 138 TIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
++V+V V N PVF + Y V E A + S+V + + G
Sbjct: 232 GYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEG 280
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 39 LTVNLNDINDNAPRLPMIPPIQIQAGEARRQI----VKIEATDNDLGVNAEITYSIYHVS 94
+T+ + D+NDN +PM A + I I A D D G N E+ Y I
Sbjct: 1515 VTILVTDLNDN---VPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIL--- 1568
Query: 95 NTGLHKFRIDPRSGVIETTGKLIAGEQ-YSITVQATDTGGKSSQTIVEVSVVPGPNTRSP 153
N F +D SG + L+ + Y++ V ATD G + ++ E++V+ P
Sbjct: 1569 NGDTDTFTVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVIL-QGLDGP 1627
Query: 154 VFQQNTYDVNVSEGASINSTVATI 177
VF Q Y + EG I + V +I
Sbjct: 1628 VFTQTKYITILKEGEPIGTNVISI 1651
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 55/145 (37%), Gaps = 11/145 (7%)
Query: 43 LNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTG 97
+ D+NDN PR P P G + + TD D+G N+E+ YS+ S
Sbjct: 2458 ITDVNDNPPRFQHHPYVTHIPSPTPPGSF---VFAVTVTDADIGSNSELHYSL---SGRN 2511
Query: 98 LHKFRIDPRSGVIETTGKLIAGEQYSITVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQ 157
KF IDP G I G L + + +V D G V+V P +
Sbjct: 2512 SEKFHIDPLRGAIMAAGPLSGASEVTFSVHVKDGGSFPKTDSTTVTVRFANKADFPKVRA 2571
Query: 158 NTYDVNVSEGASINSTVATITVSRL 182
E + + V TIT S L
Sbjct: 2572 KEQTFMFPENQPVGTLVTTITGSSL 2596
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 6 KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
K LDR+ + ++ V+A ++ S V++TV L D+NDN P E
Sbjct: 1055 KSELDRELQD--RYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEE 1112
Query: 66 ARRQ--IVKIEATDNDLGVNAEITYS---------IYHVSN--TGLHKFRIDPRSGVIET 112
R + K+ A D D G N E+ Y+ ++ V+ T HKF R ++
Sbjct: 1113 QRAGSFVGKVSAVDKDFGPNGEVRYAFEVTQPNFELHAVTGEITSTHKFD---RESLMRR 1169
Query: 113 TGKLIAGEQYSITVQATDTG---GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGAS 169
G + +S TV A D G Q V V + N +P F ++ Y VSE A+
Sbjct: 1170 RGTAV----FSFTVTAMDRGLPQPLKDQATVHV-YMKDINDNAPKFLKDFYQATVSETAT 1224
Query: 170 INSTVATITVSRLASG 185
+ V ++ S + G
Sbjct: 1225 NLTQVLRVSASDVDEG 1240
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI-QAGEAR 67
LDR+ + V + +K + S V + +++ D NDNAPR I + +
Sbjct: 2733 LDRE--KISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIFSAYVSENSPLG 2790
Query: 68 RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL--IAGEQYSIT 125
+ ++ +D D+G+NA YSI S F I+P +G I + L ++Y I
Sbjct: 2791 YTVTRVTTSDEDIGINAISRYSIVDTS----LPFTINPNTGDIVISRPLNREDTDRYRIR 2846
Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVS 180
V A D+G S + V N +P F + +Y ++ E + S V ++ +
Sbjct: 2847 VSAHDSGWTVSTDV--TIFVTDINDNTPRFSRPSYYLDCPELPELGSRVTQVSAT 2899
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 17 GKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR---RQIVKI 73
G ++ +++A + S + LTV ++D+NDN P I ++ E+ + K+
Sbjct: 960 GSYQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQI-SYEVTLSESEPVNSRFFKV 1018
Query: 74 EATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYSITVQATDTG 132
+A+D D G N EI Y+I +N F I P + I++ ++Y + V A+D
Sbjct: 1019 QASDKDSGANGEIAYTITDGNNG--DAFGIFPDGQLYIKSELDRELQDRYVLLVVASDRA 1076
Query: 133 GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+ V V+V + N P+F Y E S V ++
Sbjct: 1077 VEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVS 1123
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 37 VSLTVNLNDINDNAPRLPMIPPIQIQAGEARR---QIVKIEATDNDLGVNAEITYSIYHV 93
+L++++ D NDN P P + + E R + + ATD+D GVNA++ Y+I
Sbjct: 1299 CTLSIDILDENDNTPSFPK-STLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGS 1357
Query: 94 SNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQATDTG 132
+N G F I P +G I KL Q Y + + A D G
Sbjct: 1358 NNHG--TFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQG 1396
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 21 FQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQIQAGEARRQIV-KIEATDN 78
F V EK A ++ + L N+ PR + ++ +R V ++ A+D
Sbjct: 3273 FNVPDEEKCSFA-----TVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFASDR 3327
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITVQATDTGGKSS 136
D+G + E+ Y I+ N+ F+I+ +G I +G L E+ S+ V A + G
Sbjct: 3328 DMGADGEVHYLIF--GNSRKKGFQINKMTGQIYVSGLLDREKEERVSLKVLAKNFGNIRG 3385
Query: 137 QTIVEVSV---VPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
I EV+V V N PVF +TY V +SEG I + V ++
Sbjct: 3386 ADIDEVTVNITVLDAND-PPVFSLSTYRVQISEGVPIGTHVTFVS 3429
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM--IPPI 59
LV NL R + + + R + G S + N+ D+NDN P M
Sbjct: 1893 LVTGVFNLTRALDYETQQYYILTVRAEDGGGQSTTIRAYFNILDVNDNPPVFSMSSYSTS 1952
Query: 60 QIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG 119
++ ++ TD D GVN++++YSI S L +F +D + GV++T L
Sbjct: 1953 LMENLPLGSTVLVFNVTDADDGVNSQLSYSI--ASGDSLGQFAVD-KHGVLKTLKALDRE 2009
Query: 120 EQ--YSITVQATD 130
Q Y++ +Q D
Sbjct: 2010 SQSFYNLVIQVHD 2022
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
++ + A+++ S +S+ + + D NDN P P G+ + IV+
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFP--------PGDIFKSIVENIPLGT 1437
Query: 73 ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSITV 126
+ A D D +N +++Y+I G H F ID G I T+ ++ + +TV
Sbjct: 1438 SVISVTAHDPDADINGQLSYAIIQQMPRGNH-FSIDEVKGTIYTSAEIDREFANLFELTV 1496
Query: 127 QATD 130
+A D
Sbjct: 1497 KAND 1500
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVKIEATDN 78
+ V+A + +A+ SL V L DINDN P L + ++ ++ +++TD
Sbjct: 3478 YNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVLTVSEGEVLENKRPGTLVMTLQSTDP 3537
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YSITVQATDTGG-- 133
DL N + ++ Y +S + +GV+ TT + I EQ + ++V D+G
Sbjct: 3538 DLPPN-QGPFNYYLLSTGPATNYFSLSTAGVLSTT-REIDREQIADFYLSVVTRDSGAPQ 3595
Query: 134 KSSQTIVEVSVV 145
SS V ++V+
Sbjct: 3596 MSSTGTVHITVL 3607
>sp|Q9WTP5|CAD22_MOUSE Cadherin-22 OS=Mus musculus GN=Cdh22 PE=2 SV=1
Length = 813
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 3 VVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVS-LTVNLNDINDNAPRLPMIPPIQI 61
+ + E LDR+ R Q AR++ P S + + DIND+ PR P I
Sbjct: 116 IHATERLDREQKTFYTLRAQ--ARDRATNRLLEPESEFIIKVQDINDSEPRFLHGPYIGS 173
Query: 62 QA-----GEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL 116
A G + Q++ +A D G +A + YS+ G H F +DP++GVI T
Sbjct: 174 VAELSPTGTSVMQVMASDADDPTYGRSARLVYSVL----DGEHHFTVDPKTGVIRTAVPD 229
Query: 117 I---AGEQYSITVQATDTGGK---SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASI 170
+ + E+Y + +QATD G+ S + VV N P F Q Y ++ E A I
Sbjct: 230 LDRESQERYEVVIQATDMAGQLGGLSGSTTVTIVVTDVNDNPPRFPQKMYQFSIQESAPI 289
Query: 171 NSTVATI 177
+ V +
Sbjct: 290 GTAVGRV 296
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 47 NDNAPRLPM-IPPIQIQ-AGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI- 103
NDN PR P + IQ + + +++A D+D+G N ++TY + S +G F++
Sbjct: 268 NDNPPRFPQKMYQFSIQESAPIGTAVGRVKAEDSDVGENTDMTYHLREESGSGGDAFKVT 327
Query: 104 ---DPRSGVIETTGKLIAGEQ--YSITVQA---------TDTGGKSSQTIVEVSVVPGPN 149
D + +I L Q +++ ++A D G Q IV V+V
Sbjct: 328 TDSDTQEAIIVVQKHLDFESQQVHTVVLEALNKFVDPRFADLGTFRDQAIVRVAVT--DV 385
Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITV 179
P F+ + + V E A + S V +T
Sbjct: 386 DEPPEFRPPSGLLEVQEDAQVGSLVGVVTA 415
>sp|Q80TF3|PCD19_MOUSE Protocadherin-19 OS=Mus musculus GN=Pcdh19 PE=2 SV=3
Length = 1145
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLP------M 55
LVV K +LDR+ + F++ A + V L++ + D NDN P
Sbjct: 190 LVVEK-SLDRE--TQSHYSFRITALDGGDPPHMGTVGLSIKVTDSNDNNPVFGESTYSVS 246
Query: 56 IPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIY-HVSNTGLHKFRIDPRSGVIETTG 114
+P + ++++ A+D D G N ++ YS Y +V++ F+IDP SG++ TG
Sbjct: 247 VP----ENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTVTG 302
Query: 115 KLI--AGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPV---FQQNTYDVNVSEGA 168
L G Y + VQA D G S +V+V V N P+ N+ V VSE A
Sbjct: 303 ALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPIINLLSVNSELVEVSESA 362
Query: 169 SINSTVATITVSRLASG 185
+A + VS SG
Sbjct: 363 PPGYVIALVRVSDRDSG 379
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQI 61
L+V+K+ +DRD + +I+ E ++ + V + V + D+NDNAP P I++
Sbjct: 80 LLVTKQKIDRDLLCRQSPKC-IISLEVMSSSMEICV-IKVEIKDLNDNAPSFPAAQ-IEL 136
Query: 62 QAGEARRQIVKI---EATDNDLGVNAEITYSIYHVSNTGLH-KFRIDPRSG---VIETTG 114
+ EA +I A D D G TY + GL K R D V+E +
Sbjct: 137 EISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSL 196
Query: 115 KLIAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINST 173
YS + A D G V +S+ V N +PVF ++TY V+V E + N+
Sbjct: 197 DRETQSHYSFRITALDGGDPPHMGTVGLSIKVTDSNDNNPVFGESTYSVSVPENSPPNTP 256
Query: 174 VATITVS 180
V + S
Sbjct: 257 VIRLNAS 263
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARRQIVK------ 72
F F+V+A++ + ++ V + D+NDN P + P I G A I +
Sbjct: 529 FEFKVLAKDGGLPSLQSNATVRVIILDVNDNTPVITAPPLIN---GTAEVYIPRNSGIGY 585
Query: 73 ----IEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITV 126
++A D D G N +TY + + G F ID +G + TT + Y + V
Sbjct: 586 LVTVVKADDYDEGENGRVTYDMTE-GDRGF--FEIDQVNGEVRTTRTFNENSKPSYELIV 642
Query: 127 QATDTGGK--SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLAS 184
A D G S+ +V + + P + + + N + + SI + + +T+ +A
Sbjct: 643 VAHDHGKTSLSASALVLIYLSPALDAQESMGSVNLSLIFIIALGSI-AGILFVTMIFVAI 701
Query: 185 GCAIMNKE 192
C NKE
Sbjct: 702 KCKRDNKE 709
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL--PMIPPIQIQAGEA 66
LDR+ + ++ + AR+ S TV + D NDN P P I +
Sbjct: 411 LDREQHD--QYNLTIQARDSGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTP 468
Query: 67 RRQIVKIEATDNDLGVNAEITYSIY--HVSNTGLHKF-RIDPRSGVIETTGKLIAGEQ-- 121
++ + A D D+G+N ++Y I V + + + I+P SG I + EQ
Sbjct: 469 GAYLLSVSARDPDMGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYAL-RSFNHEQTK 527
Query: 122 -YSITVQATDTGGKSSQTIVEVSVV 145
+ V A D G S Q+ V V+
Sbjct: 528 AFEFKVLAKDGGLPSLQSNATVRVI 552
>sp|Q99PJ1|PCD15_MOUSE Protocadherin-15 OS=Mus musculus GN=Pcdh15 PE=1 SV=2
Length = 1943
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 30 GTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDNDLGVNA 84
G S PV + + + D NDN P P I + G++ ++++ A D D G N
Sbjct: 491 GVQESEPVVVNIRVMDANDNTPTFPEISYDVYVYTDMSPGDS---VIQLTAVDADEGSNG 547
Query: 85 EITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG----GKSSQT 138
EI+Y I V G F I+ +G++ +LI G+ Y++TVQA+D + S
Sbjct: 548 EISYEIL-VGGKG--DFVINKTTGLVSIAPGVELIVGQTYALTVQASDNAPPAERRHSIC 604
Query: 139 IVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
V + V+P N P F Q Y + VSE I + + +
Sbjct: 605 TVYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAILLNL 643
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 40 TVNL--NDINDNAPRL-PMIPP-IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
TVN+ D+NDNAP P +P + + EA + ++ ATD D G+N ++ YS+ + +N
Sbjct: 707 TVNIVVTDVNDNAPVFDPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSLGNFNN 766
Query: 96 TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
FRI +G I T KL A + Y + V ATD + + + + V + S
Sbjct: 767 L----FRIT-SNGSIYTAVKLNREARDHYELVVVATDGAVHPRHSTLTLYIKVLDIDDNS 821
Query: 153 PVFQQNTYDVNVSE 166
PVF +TY V V E
Sbjct: 822 PVFTNSTYTVVVEE 835
>sp|Q9BYE9|CDHR2_HUMAN Cadherin-related family member 2 OS=Homo sapiens GN=CDHR2 PE=1 SV=2
Length = 1310
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 22 QVIAREKQGTAASVPVSLTVNLNDINDNAPRLPM-IPPIQIQAGEARRQIV--KIEATDN 78
QV+A + SV + +T++L DIND+ P P + + + A +V I ATD
Sbjct: 450 QVVATDSVSQNFSVAM-VTIHLRDINDHRPTFPQSLYVLTVPEHSATGSVVTDSIHATDP 508
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET-TGKLIAGEQ---YSITVQATDTGGK 134
D G +ITYS+ + G F++DP SG + G+L+ E Y +T+QATD G
Sbjct: 509 DTGAWGQITYSL--LPGNGADLFQVDPVSGTVTVRNGELLDRESQAVYYLTLQATDGGNL 566
Query: 135 SSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
SS T +++ ++ N +PV +Y++ V E
Sbjct: 567 SSSTTLQIHLL-DINDNAPVV-SGSYNIFVQE 596
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 7 ENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEA 66
E LDR+ + + + + G S +L ++L DINDNAP + I +Q E
Sbjct: 544 ELLDRE----SQAVYYLTLQATDGGNLSSSTTLQIHLLDINDNAPVVSGSYNIFVQEEEG 599
Query: 67 RRQIVKIEATDNDL-GV-NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKL-------- 116
V I+A DND G N+ + +++ + H F +DP +G++ G L
Sbjct: 600 NVS-VTIQAHDNDEPGTNNSRLLFNL--LPGPYSHNFSLDPDTGLLRNLGPLDREAIDPA 656
Query: 117 IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
+ G + +TV +D G T V V++ V N P+F Q++Y+ V E
Sbjct: 657 LEG-RIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSYNFTVKE 706
Score = 33.5 bits (75), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 33 ASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR--QIVKIEATDNDLGVNAEITYSI 90
S+PV L++++ D D P+ A +A + ++ +EA D D G+N + YSI
Sbjct: 221 CSLPVFLSISVVDQPDLDPQFVREFYSASVAEDAAKGTSVLTVEAVDGDKGINDPVIYSI 280
Query: 91 YHVSNTGLHKFRIDPRSGVIETTGKLI------AGEQYSITVQATDTG----GKSSQTIV 140
+ + G D GVI G L A E+ + V AT+T G+ ++ +
Sbjct: 281 SYSTRPGWFDIGAD---GVIRVNGSLDREQLLEADEEVQLQVTATETHLNIYGQEAKVSI 337
Query: 141 EVSV-VPGPNTRSPVF 155
V+V V N P F
Sbjct: 338 WVTVRVMDVNDHKPEF 353
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 38 SLTVNLNDINDNAPR-LP------MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSI 90
SL + + D+NDNAP LP +IP + + R++ + A D+D G N I +SI
Sbjct: 913 SLLITIEDVNDNAPYFLPENKTFVIIPELVL----PNREVASVRARDDDSGNNGVILFSI 968
Query: 91 YHV 93
V
Sbjct: 969 LRV 971
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 38 SLTVNLNDINDNAPRLP--MIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
++ VN+NDINDN P P P ++ G+ ++ A D D G N ++ YSI +
Sbjct: 1729 TVLVNVNDINDNVPTFPRDYEGPFEVTEGQPGPRVWTFLAHDRDSGPNGQVEYSI--MDG 1786
Query: 96 TGLHKFRIDPRSGVIETTGKLIAGEQ----YSITVQATDTGGK--SSQTIVEVSVVPGPN 149
L +F I P GV+ + + Y++T+ A D G SS +V + V+ N
Sbjct: 1787 DPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGMPPLSSTMLVGIRVL-DIN 1845
Query: 150 TRSPVFQQNTYDVNVSEGASINSTVATITVSRLASGC 186
PV ++ +SE + ++S VA + S SGC
Sbjct: 1846 DNDPVLLNLPMNITISENSPVSSFVAHVLASDADSGC 1882
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQ 60
+VV+ LDR+ +++ +V+A + S +LT+++ D+ND P P + +
Sbjct: 946 VVVTTTELDRE--RIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVS 1003
Query: 61 IQAGEARR-QIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI-- 117
+ R ++V + TDND+G+NAE++Y I + G KF + R V+ T L
Sbjct: 1004 VSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDG--KFSVGYRDAVVRTVVGLDRE 1061
Query: 118 AGEQYSITVQATDTG--GKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSE 166
Y + ++A D G GK V V V N P+F Q++Y+ +V E
Sbjct: 1062 TTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASV----PVSLTVNLNDINDNAPRL--PMIPPIQI 61
+LDR+ + + +A++ G AS V + + + D+ND P+ P
Sbjct: 2462 SLDREKKD--HYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSVY 2519
Query: 62 QAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ 121
+ A ++ + ATD D G N E+TYS+ G+ F +D SG++ T L + E+
Sbjct: 2520 ENEPAGTSVITMMATDQDEGPNGELTYSL---EGPGVEAFHVDMDSGLVTTQRPLQSYEK 2576
Query: 122 YSITVQATDTG----GKSSQTIVEVSVVPGPNTRSPVF 155
+S+TV ATD G ++ +VEV V N PVF
Sbjct: 2577 FSLTVVATDGGEPPLWGTTMLLVEVIDV---NDNRPVF 2611
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
LDR+ + + QV+A ++ L V + DINDN P + + E
Sbjct: 1485 LDREELD--HYILQVVASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVG 1542
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYSI- 124
+V++ ATD D+G+N+ ++Y Y FR+D SG I T E+ S
Sbjct: 1543 GGTAVVQVRATDRDIGINSVLSY--YITEGNKDMAFRMDRISGEIATRPAPPDRERQSFY 1600
Query: 125 ----TVQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA-SINSTVATITV 179
TV+ T S+ T V V++V N +P+FQQ Y+V + EG ++N+++ TI
Sbjct: 1601 HLVATVEDEGTPTLSATTHVYVTIV-DENDNAPMFQQPHYEVLLDEGPDTLNTSLITIQA 1659
Query: 180 SRLASG 185
L G
Sbjct: 1660 LDLDEG 1665
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 29/177 (16%)
Query: 9 LDRDPPNPGK---FRFQVIAREKQG---TAASVPVSLTVNLNDINDNAPRLPMIPPIQ-- 60
LDR+ P+P + R V++ G A+ ++ VNL D+NDN P +P +
Sbjct: 840 LDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEV 899
Query: 61 ---IQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHK--FRIDPRSGVIETTGK 115
I AG + Q+V I D D G+N ++Y + G+ + F I+ SGV+ TT +
Sbjct: 900 LEGIPAGVSIYQVVAI---DLDEGLNGLVSYRM----PVGMPRMDFLINSSSGVVVTTTE 952
Query: 116 L----IAGEQYSITVQATDTG--GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSE 166
L IA +Y + V A+D G KSS + + + V+ N +P F Y+V+VSE
Sbjct: 953 LDRERIA--EYQLRVVASDAGTPTKSSTSTLTIHVL-DVNDETPTFFPAVYNVSVSE 1006
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEARR------QIV 71
+F +IAR+ G + V +N+ D+NDN P G R Q+V
Sbjct: 528 RFTLTIIARDGGGEETTGRVR--INVLDVNDNVPTFQK----DAYVGALRENEPSVTQLV 581
Query: 72 KIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGV-IETTGKLIAGEQYS-----IT 125
++ ATD D N +ITYSI S G + F I G + + + + EQ S +T
Sbjct: 582 RLRATDEDSPPNNQITYSIVSASAFGSY-FDISLYEGYGVISVSRPLDYEQISNGLIYLT 640
Query: 126 VQATDTGGKSSQTIVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRL 182
V A D G + V V++ V N P F + Y V+V E +TV + + L
Sbjct: 641 VMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDL 698
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 18 KFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPP----IQIQAG-EARRQIVK 72
KF V+A + L V + D+NDN P + PP + I+ R + +
Sbjct: 2576 KFSLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVF-VRPPNGTILHIREEIPLRSNVYE 2634
Query: 73 IEATDNDLGVNAEITYSIYHVS-NTGLHKFRIDPRSGVIETTGKLIAGEQ--YSITVQAT 129
+ ATD D G+N + YS + N F IDP SG+I+T +L Q YS+ + A+
Sbjct: 2635 VYATDKDEGLNGAVRYSFLKTAGNRDWEFFIIDPISGLIQTAQRLDRESQAVYSLILVAS 2694
Query: 130 DTG 132
D G
Sbjct: 2695 DLG 2697
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 32 AASVP-VSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--------RQIVKIEATDNDLGV 82
+ SVP LTVN+ D+NDN P+ P I R ++ + A D D G+
Sbjct: 2271 SVSVPNAKLTVNVLDVNDNTPQFK---PFGITYYMERILEGATPGTTLIAVAAVDPDKGL 2327
Query: 83 NAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--------EQYSITVQATDTGG- 133
N +TY++ + G + + GK+IA + TV+A+D G
Sbjct: 2328 NGLVTYTLLDLVPPGYVQLED-------SSAGKVIANRTVDYEEVHWLNFTVRASDNGSP 2380
Query: 134 -KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATITVSRLASG 185
++++ V + +V N +P+F Q +Y V E + + + T+T + SG
Sbjct: 2381 PRAAEIPVYLEIV-DINDNNPIFDQPSYQEAVFEDVPVGTIILTVTATDADSG 2432
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRL-PMIPPIQI-QAGEA 66
+DR+ +P ++A E G S L + + D NDN P P + + +
Sbjct: 2027 IDREAFSPPILELLLLA-EDIGLLNST-AHLLITILDDNDNRPTFSPATLTVHLLENCPP 2084
Query: 67 RRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQ---YS 123
++++ ATD D G+N E+ +Y + +F I +GVI I E+ Y
Sbjct: 2085 GFSVLQVTATDEDSGLNGEL---VYRIEAGAQDRFLIHLVTGVIRVGNATIDREEQESYR 2141
Query: 124 ITVQATDTGG-KSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATIT 178
+TV ATD G S T + ++ N P F V+V E A + +A IT
Sbjct: 2142 LTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANIT 2197
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 70 IVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAG--EQYSITVQ 127
++ + ATDND G E++Y + +F +D +G+I +L +++++T+
Sbjct: 479 VLTVLATDNDAGTFGEVSYFF----SDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTII 534
Query: 128 ATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTY 160
A D GG+ + V ++V+ N P FQ++ Y
Sbjct: 535 ARDGGGEETTGRVRINVL-DVNDNVPTFQKDAY 566
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 29/190 (15%)
Query: 2 LVVSKENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAP---------R 52
+V ++ LDR+ +F + + QG + + + + D+NDNAP R
Sbjct: 86 VVWLRQPLDRE--TKSEFTVEFSVSDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVR 140
Query: 53 LPMIPPIQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIET 112
+P P+ I + ATD DLG + YS S F ID G++
Sbjct: 141 IPENTPVGTP-------IFIVNATDPDLGAGGSVLYSFQPPS----QFFAIDSARGIVTV 189
Query: 113 TGKLI--AGEQYSITVQATDTGG-KSSQTIVEVS-VVPGPNTRSPVFQQNTYDVNVSEGA 168
+L + Y +TV ATD + T+ ++ ++ P+F Y N+ E +
Sbjct: 190 IRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHS 249
Query: 169 SINSTVATIT 178
+TV IT
Sbjct: 250 PPGTTVRIIT 259
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 33 ASVPVSLTVNLNDINDNAPRL-----PMIPPIQIQAGEARRQIVKIEATDNDLGVNAEIT 87
A+V + + + DINDNAP + Q G A +++ D +LG+N+
Sbjct: 328 ATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNS--M 385
Query: 88 YSIYHVSNTGLHKFRIDPRS--GVIETTGKLIAGEQYSITVQATDTGGKSSQTI------ 139
+ +Y V N H F I P S G + ++ Y TV D +++++
Sbjct: 386 FEVYLVGNNS-HHFIISPTSVQGKADIRIRVAIPLDYE-TVDRYDFDLFANESVPDHVGY 443
Query: 140 --VEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
V+++++ N P+F Q Y++++ E ++ ++V T+
Sbjct: 444 AKVKITLI-NENDNRPIFSQPLYNISLYENVTVGTSVLTV 482
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 24 IAREKQGTAASVPVSLTVNLNDINDNAPRLPMIP-----PIQIQAGEARRQIVKIEATDN 78
+ + GTA ++ V + D+NDN P P I G + I++++ATD
Sbjct: 1078 VGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHS---ILQLKATDA 1129
Query: 79 DLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGEQYS---ITVQATDTGGKS 135
D G + Y I H N G + FRI +G++ + + E+ S + V+A +
Sbjct: 1130 DEGEFGRVWYRILH-GNHG-NNFRIHVSNGLLMRGPRPLDRERNSSHVLIVEAYNHDLGP 1187
Query: 136 SQTIVEVSV-VPGPNTRSPVFQQNTYD-VNVSEGASINSTVATITVSRLASG 185
++ V V V V N +PVF Q Y + + E A I ++V + + SG
Sbjct: 1188 MRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVVQATDRDSG 1239
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 9 LDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE--- 65
LD + + G V+A + + V +T+ + D NDN P P + E
Sbjct: 627 LDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSK-PAYFVSVVENIM 685
Query: 66 ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYS 123
A ++ + ATD D IY + G +FRI+ RSG I TT L +Y
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLE--GSTQFRINARSGEITTTSLLDRETKSEYI 743
Query: 124 ITVQATDTG-GKSSQT-IVEVSV-VPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
+ V+A D G G + +T I V++ + N P ++ Y +N+ E +S V T+
Sbjct: 744 LIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTV 800
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 16/174 (9%)
Query: 6 KENLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGE 65
+++++ D + + AR++ S + + + + DINDN P L + P+ I E
Sbjct: 1804 RKDVELDRETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNL-PMNITISE 1862
Query: 66 ---ARRQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTGKLIAGE-- 120
+ + A+D D G NA +T++I + F I+ +G++ T + + E
Sbjct: 1863 NSPVSSFVAHVLASDADSGCNARLTFNI--TAGNRERAFFINATTGIV-TVNRPLDRERI 1919
Query: 121 -QYSITVQATDTG-----GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGA 168
+Y +T+ D + ++ + + N P+F ++TY V E +
Sbjct: 1920 PEYKLTISVKDNPENPRIARRDYDLLLI-FLSDENDNHPLFTKSTYQAEVMENS 1972
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 69 QIVKIEATDNDLGVNAEITYSI-YHVSNTGLHKFRIDPRSGVIETTGKLI--AGEQYSIT 125
+IV+++A D +N +ITY + S F+ID +GVI G + G+ Y++T
Sbjct: 1331 EIVRVQAYSID-NLN-QITYRFNAYTSTQAKALFKIDAITGVITVQGLVDREKGDFYTLT 1388
Query: 126 VQATDTGGKSSQTIVEVSVVPGPNTRSPVFQQNTYD-VNVSEGASINSTVATI 177
V A D G K T+ V N SP F + V++ E + VAT+
Sbjct: 1389 VVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAVSIPEDCPVGQRVATV 1441
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQ----IQAGEARRQIVKIE 74
+R V+A ++ S +T+ ++DIND+ P + PIQ +++ E I I
Sbjct: 2140 YRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEF--LNPIQTVSVLESAEPGTVIANIT 2197
Query: 75 ATDNDLGVNAEITYSI 90
A D+DL N ++ Y I
Sbjct: 2198 AIDHDL--NPKLEYHI 2211
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 41 VNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEATDNDLGVNAEITYSIYHVSNTGL 98
V L DIND PR A +A+ +++++ A D D+G N+ + YSI +
Sbjct: 2834 VVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSLVFYSIL-----AI 2888
Query: 99 HKFR 102
H FR
Sbjct: 2889 HYFR 2892
>sp|P55285|CADH6_HUMAN Cadherin-6 OS=Homo sapiens GN=CDH6 PE=1 SV=1
Length = 790
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 33/194 (17%)
Query: 8 NLDRDPPNPGKFRFQVIAREKQGTAASVPVSLTVN--LNDINDNAPRLPMIPPIQIQAGE 65
N+DR+ N +++ + A++ G + + TVN L D+NDN PR P Q + E
Sbjct: 223 NMDRE--NREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQ-STYQFKTPE 279
Query: 66 AR---RQIVKIEATDNDLGVNAEITYSIYHVSNTGLHKFRI----DPRSGVIETTGKLIA 118
+ I +I+A+D D+G NAEI YSI GL F + + + G+I T KL+
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSI--TDGEGLDMFDVITDQETQEGII-TVKKLLD 336
Query: 119 GEQ---YSITVQATDTG----------GKSSQTI-VEVSVVPGPNTRSPVFQQNTYDVNV 164
E+ Y++ V+A++ K S T+ + V V P PVF + Y + +
Sbjct: 337 FEKKKVYTLKVEASNPYVEPRFLYLGPFKDSATVRIVVEDVDEP----PVFSKLAYILQI 392
Query: 165 SEGASINSTVATIT 178
E A IN+T+ ++T
Sbjct: 393 REDAQINTTIGSVT 406
>sp|Q96QU1|PCD15_HUMAN Protocadherin-15 OS=Homo sapiens GN=PCDH15 PE=1 SV=2
Length = 1955
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 19 FRFQVIAREKQGTAASVPVSLTVNLNDINDNAPRLPMIPPIQIQAGEAR--RQIVKIEAT 76
+ F + A + G S PV + + + D NDN P P I + R ++++ A
Sbjct: 477 YTFSITAFD--GVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAV 534
Query: 77 DNDLGVNAEITYSIYHVSNTGLHKFRIDPRSGVIETTG--KLIAGEQYSITVQATDTG-- 132
D D G N EITY I V G F I+ +G+I ++I G Y++TVQA D
Sbjct: 535 DADEGSNGEITYEIL-VGAQG--DFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAPP 591
Query: 133 --GKSSQTIVEVSVVPGPNTRSPVFQQNTYDVNVSEGASINSTVATI 177
++S V + V+P N P F Q Y + +SE + + + +
Sbjct: 592 AERRNSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNL 638
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 40 TVNL--NDINDNAPRL-PMIPP-IQIQAGEARRQIVKIEATDNDLGVNAEITYSIYHVSN 95
TVN+ D+NDNAP P +P + + EA + +++ATD D G+N ++ YS+ + +N
Sbjct: 702 TVNIVVTDVNDNAPVFDPYLPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLGNFNN 761
Query: 96 TGLHKFRIDPRSGVIETTGKL--IAGEQYSITVQATDTGGKSSQTIVEVSV-VPGPNTRS 152
FRI +G I T KL + Y + V ATD + + +++ V + S
Sbjct: 762 L----FRIT-SNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNS 816
Query: 153 PVFQQNTYDVNVSEGASINSTVATITVSRLASGCAI 188
PVF +TY V V E +T+ I + G +
Sbjct: 817 PVFTNSTYTVLVEENLPAGTTILQIEAKDVDLGANV 852
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,822,271
Number of Sequences: 539616
Number of extensions: 2737783
Number of successful extensions: 7768
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 5614
Number of HSP's gapped (non-prelim): 1471
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)